BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013831
(435 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302144182|emb|CBI23309.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/427 (71%), Positives = 355/427 (83%), Gaps = 9/427 (2%)
Query: 1 MATAKRELELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDN 60
MA+ KR+L P+ +PES KA + D S KQRVVLNPADCDLDF+I +
Sbjct: 1 MASIKRQLSEPE--EPESKKPKAVLSD-------SPEHKTKQRVVLNPADCDLDFNIVGD 51
Query: 61 GLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTS 120
GL+ S LH GFAYCWSGAR NVGI GGKYCFGCKI+STQPVDMEDTPPDQQHVCR+G S
Sbjct: 52 GLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGIS 111
Query: 121 RGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFA 180
RGDD VG LGETE SFGFGGTGKFS G F N+GEKFGVGDTI+CA++LE+KPLA+I F+
Sbjct: 112 RGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFS 171
Query: 181 KNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVE 240
KNGKWLG AK+FDAG GLGVVDS +++ ESA+FPH+LLKNV+V +QFS E+GL+P E
Sbjct: 172 KNGKWLGVAKEFDAGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEE 231
Query: 241 GYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGT 300
GYK W SAL DGN+++GP+F + +DCEVMMMVGLPASGK+TWAEKWVK+H EKRY+LLGT
Sbjct: 232 GYKPWASALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGT 291
Query: 301 NLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARK 360
NL L+QMKVPGLLRK NY ERF+ LM RA IF+ LLSRAS+TP N+IIDQTNV+K+ARK
Sbjct: 292 NLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARK 351
Query: 361 RKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPG 420
RKL+ F NF+KIAVV+FPKPE+LK R+ KRFKEMGKEVPADAVN M+ANYVLP +KD PG
Sbjct: 352 RKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPRSKDMPG 411
Query: 421 SDELFDQ 427
SDE FDQ
Sbjct: 412 SDEDFDQ 418
>gi|359495485|ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Vitis vinifera]
Length = 590
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/427 (71%), Positives = 355/427 (83%), Gaps = 9/427 (2%)
Query: 1 MATAKRELELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDN 60
MA+ KR+L P+ +PES KA + D S KQRVVLNPADCDLDF+I +
Sbjct: 148 MASIKRQLSEPE--EPESKKPKAALSD-------SPEHKTKQRVVLNPADCDLDFNIVGD 198
Query: 61 GLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTS 120
GL+ S LH GFAYCWSGAR NVGI GGKYCFGCKI+STQPVDMEDTPPDQQHVCR+G S
Sbjct: 199 GLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGIS 258
Query: 121 RGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFA 180
RGDD VG LGETE SFGFGGTGKFS G F N+GEKFGVGDTI+CA++LE+KPLA+I F+
Sbjct: 259 RGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFS 318
Query: 181 KNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVE 240
KNGKWLG AK+FDAG GLGVVDS +++ ESA+FPH+LLKNV+V +QFS E+GL+P E
Sbjct: 319 KNGKWLGVAKEFDAGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEE 378
Query: 241 GYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGT 300
GYK W SAL DGN+++GP+F + +DCEVMMMVGLPASGK+TWAEKWVK+H EKRY+LLGT
Sbjct: 379 GYKPWASALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGT 438
Query: 301 NLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARK 360
NL L+QMKVPGLLRK NY ERF+ LM RA IF+ LLSRAS+TP N+IIDQTNV+K+ARK
Sbjct: 439 NLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARK 498
Query: 361 RKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPG 420
RKL+ F NF+KIAVV+FPKPE+LK R+ KRFKEMGKEVPADAVN M+ANYVLP +KD PG
Sbjct: 499 RKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPG 558
Query: 421 SDELFDQ 427
SDE FDQ
Sbjct: 559 SDEDFDQ 565
>gi|147827160|emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]
Length = 1021
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/427 (71%), Positives = 355/427 (83%), Gaps = 9/427 (2%)
Query: 1 MATAKRELELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDN 60
MA+ KR+L P+ +PES KA + D S KQRVVLNPADCDLDF+I +
Sbjct: 168 MASIKRQLSEPE--EPESKKPKAALSD-------SPEHKTKQRVVLNPADCDLDFNIVGD 218
Query: 61 GLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTS 120
GL+ S LH GFAYCWSGAR NVGI GGKYCFGCKI+STQPVDMEDTPPDQQHVCR+G S
Sbjct: 219 GLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGIS 278
Query: 121 RGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFA 180
RGDD VG LGETE SFGFGGTGKFS G F N+GEKFGVGDTI+CA++LE+KPLA+I F+
Sbjct: 279 RGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFS 338
Query: 181 KNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVE 240
KNGKWLG AK+FDAG GLGVVDS +++ ESA+FPH+LLKNV+V +QFS E+GL+P E
Sbjct: 339 KNGKWLGVAKEFDAGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEE 398
Query: 241 GYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGT 300
GYK W SAL DGN+++GP+F + +DCEVMMMVGLPASGK+TWAEKWVK+H EKRY+LLGT
Sbjct: 399 GYKPWASALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGT 458
Query: 301 NLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARK 360
NL L+QMKVPGLLRK NY ERF+ LM RA IF+ LLSRAS+TP N+IIDQTNV+K+ARK
Sbjct: 459 NLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARK 518
Query: 361 RKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPG 420
RKL+ F NF+KIAVV+FPKPE+LK R+ KRFKEMGKEVPADAVN M+ANYVLP +KD PG
Sbjct: 519 RKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPG 578
Query: 421 SDELFDQ 427
SDE FDQ
Sbjct: 579 SDEDFDQ 585
>gi|359495491|ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Vitis vinifera]
Length = 514
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/427 (71%), Positives = 355/427 (83%), Gaps = 9/427 (2%)
Query: 1 MATAKRELELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDN 60
MA+ KR+L P+ +PES KA + D S KQRVVLNPADCDLDF+I +
Sbjct: 1 MASIKRQLSEPE--EPESKKPKAVLSD-------SPEHKTKQRVVLNPADCDLDFNIVGD 51
Query: 61 GLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTS 120
GL+ S LH GFAYCWSGAR NVGI GGKYCFGCKI+STQPVDMEDTPPDQQHVCR+G S
Sbjct: 52 GLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGIS 111
Query: 121 RGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFA 180
RGDD VG LGETE SFGFGGTGKFS G F N+GEKFGVGDTI+CA++LE+KPLA+I F+
Sbjct: 112 RGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFS 171
Query: 181 KNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVE 240
KNGKWLG AK+FDAG GLGVVDS +++ ESA+FPH+LLKNV+V +QFS E+GL+P E
Sbjct: 172 KNGKWLGVAKEFDAGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEE 231
Query: 241 GYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGT 300
GYK W SAL DGN+++GP+F + +DCEVMMMVGLPASGK+TWAEKWVK+H EKRY+LLGT
Sbjct: 232 GYKPWASALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGT 291
Query: 301 NLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARK 360
NL L+QMKVPGLLRK NY ERF+ LM RA IF+ LLSRAS+TP N+IIDQTNV+K+ARK
Sbjct: 292 NLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARK 351
Query: 361 RKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPG 420
RKL+ F NF+KIAVV+FPKPE+LK R+ KRFKEMGKEVPADAVN M+ANYVLP +KD PG
Sbjct: 352 RKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPRSKDMPG 411
Query: 421 SDELFDQ 427
SDE FDQ
Sbjct: 412 SDEDFDQ 418
>gi|302144178|emb|CBI23305.3| unnamed protein product [Vitis vinifera]
Length = 1459
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 296/427 (69%), Positives = 343/427 (80%), Gaps = 25/427 (5%)
Query: 1 MATAKRELELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDN 60
MA+ KR+L P+ +PES KA + D S KQRVVLNPADCDLDF+I +
Sbjct: 9 MASIKRQLSEPE--EPESKKPKAALSD-------SPEHKTKQRVVLNPADCDLDFNIVGD 59
Query: 61 GLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTS 120
GL+ S LH GFAYCWSGAR NVGI GGKYCFGCKI+STQPVDMEDTPPDQQHVCR+G S
Sbjct: 60 GLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGIS 119
Query: 121 RGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFA 180
RGDD VG LGETE SFGFGGTGKFS G F N+GEKFGVGDTI+CA++LE+KPLA+I F+
Sbjct: 120 RGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFS 179
Query: 181 KNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVE 240
KNGKWLG AK+FDAG A+FPH+LLKNV+V +QFS E+GL+P E
Sbjct: 180 KNGKWLGVAKEFDAGVK----------------ALFPHVLLKNVMVQVQFSTEEGLVPEE 223
Query: 241 GYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGT 300
GYK W SAL DGN+++GP+F + +DCEVMMMVGLPASGK+TWAEKWVK+H EKRY+LLGT
Sbjct: 224 GYKPWASALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGT 283
Query: 301 NLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARK 360
NL L+QMKVPGLLRK NY ERF+ LM RA IF+ LLSRAS+TP N+IIDQTNV+K+ARK
Sbjct: 284 NLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARK 343
Query: 361 RKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPG 420
RKL+ F NF+KIAVV+FPKPE+LK R+ KRFKEMGKEVPADAVN M+ANYVLP +KD PG
Sbjct: 344 RKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPG 403
Query: 421 SDELFDQ 427
SDE FDQ
Sbjct: 404 SDEDFDQ 410
>gi|449457692|ref|XP_004146582.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Cucumis sativus]
Length = 595
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 278/388 (71%), Positives = 334/388 (86%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVST 99
++Q VVLNPADCDLDF+I+ +GL+ S L+++GFAYCWSGAR VGI GGKYCFGCKI+S
Sbjct: 31 KQQPVVLNPADCDLDFEIKSDGLQGSALYEKGFAYCWSGARTTVGITGGKYCFGCKIISL 90
Query: 100 QPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGV 159
QPV+M DT PDQQH+CRVG SRGD PVG LGET QSFGFGGTGKFS+ G F ++GEKFG
Sbjct: 91 QPVEMSDTAPDQQHLCRVGISRGDSPVGNLGETIQSFGFGGTGKFSNAGKFSDYGEKFGF 150
Query: 160 GDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHI 219
GD+I+CA++LESKPLA+IGF+KNGKWLGT+ QFDAG GLGVVDS +++ + ESA FPH+
Sbjct: 151 GDSIVCAVNLESKPLASIGFSKNGKWLGTSIQFDAGPRGLGVVDSPLRKCRWESAFFPHV 210
Query: 220 LLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
LLKNV V +QFS+E+GL+P EG+K W ALDD N++LGPTF N++DCEVMMMVGLPASGK
Sbjct: 211 LLKNVEVQLQFSIEEGLVPEEGFKPWACALDDNNALLGPTFNNVRDCEVMMMVGLPASGK 270
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
+TWA+KW DHPEKR ILLGTNLIL+QMK+PGLLRKHNY ERF LM +A IF++LLSR
Sbjct: 271 STWAKKWADDHPEKRQILLGTNLILDQMKLPGLLRKHNYGERFDRLMDQATEIFNILLSR 330
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+ PRN+IIDQTNV+K ARKRKL+ F +F+KIAVVVFPKPE+L+ RS +RF+EMGKEVP
Sbjct: 331 AAAVPRNYIIDQTNVYKHARKRKLKPFADFQKIAVVVFPKPEELQRRSAERFREMGKEVP 390
Query: 400 ADAVNNMLANYVLPVNKDTPGSDELFDQ 427
ADAVN MLANY+LP +KD PGS E FD+
Sbjct: 391 ADAVNKMLANYILPTSKDIPGSGEYFDE 418
>gi|449488411|ref|XP_004158025.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Cucumis sativus]
Length = 595
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 285/427 (66%), Positives = 348/427 (81%), Gaps = 9/427 (2%)
Query: 1 MATAKRELELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDN 60
MA+ + L+ D + E K A+V D ++Q V+LNPADCDLDF+I+ +
Sbjct: 1 MASKRHRLQEDDYEAKEP--KNARVSDAFE-------FKKQQPVMLNPADCDLDFEIKSD 51
Query: 61 GLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTS 120
GL+ S L+++GFAYCWSGAR VGI GGKYCFGCKI+S QPV+M DT PDQQH+CRVG S
Sbjct: 52 GLQGSALYEKGFAYCWSGARTTVGITGGKYCFGCKIISLQPVEMSDTAPDQQHLCRVGIS 111
Query: 121 RGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFA 180
RGD P+G LGET QSFGFGGTGKFS+ G F ++GEKFG GD+I+CA++LESKPLA+IGF+
Sbjct: 112 RGDSPLGNLGETIQSFGFGGTGKFSNAGKFSDYGEKFGFGDSIVCAVNLESKPLASIGFS 171
Query: 181 KNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVE 240
KNGKWLGT+ QFDAG GLGVVDS +++ + ESA FPH+LLKNV V +QFS+E+GL+P E
Sbjct: 172 KNGKWLGTSIQFDAGPRGLGVVDSPLRKCRWESAFFPHVLLKNVEVQLQFSIEEGLVPEE 231
Query: 241 GYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGT 300
G+K W ALDD N++LGPTF N++DCEVMMMVGLPASGK+TWA+KW DHPEKR ILLGT
Sbjct: 232 GFKPWACALDDNNALLGPTFNNVRDCEVMMMVGLPASGKSTWAKKWADDHPEKRQILLGT 291
Query: 301 NLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARK 360
NLIL+QMK+PGLLRKHNY ERF LM +A IF++LLSRA+ PRN+IIDQTNV+K ARK
Sbjct: 292 NLILDQMKLPGLLRKHNYGERFDRLMDQATEIFNILLSRAAAVPRNYIIDQTNVYKHARK 351
Query: 361 RKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPG 420
RKL+ F +F+KIAVVVFPKPE+L+ RS +RF+EMGKEVPADAVN MLANY+LP +KD PG
Sbjct: 352 RKLKPFADFQKIAVVVFPKPEELQRRSAERFREMGKEVPADAVNKMLANYILPTSKDIPG 411
Query: 421 SDELFDQ 427
S E FD+
Sbjct: 412 SGEYFDE 418
>gi|356557660|ref|XP_003547133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Glycine max]
Length = 517
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/387 (71%), Positives = 323/387 (83%), Gaps = 4/387 (1%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
RV LNPADCDLDF I+ NG GLH+EGFAYCWSGARANVGI G+YCF CK+VS Q V
Sbjct: 37 RVFLNPADCDLDFHIDGNGHVGYGLHEEGFAYCWSGARANVGITRGRYCFACKVVSAQTV 96
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+M+DT P+QQH+CR+G SRGD+ VG LGE+ QSFG+GGTGKFS+ G FL+FG+KFGVGDT
Sbjct: 97 NMQDTAPEQQHICRLGISRGDNAVGNLGESRQSFGYGGTGKFSNCGRFLDFGDKFGVGDT 156
Query: 163 IICAIDL--ESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHIL 220
I+C +DL ES+PLA+IGF+KNGKWLG A QFDA LGVVDS Q SA+FPH+L
Sbjct: 157 IVCCVDLDLESRPLASIGFSKNGKWLGAATQFDAAR--LGVVDSPPGNLQWTSALFPHVL 214
Query: 221 LKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKT 280
LKNVVV MQFSV+ GL+P +G+K W SA++DGN V+GP+F +DCEV+MMVGLPASGKT
Sbjct: 215 LKNVVVQMQFSVKDGLVPEDGFKPWASAMEDGNIVMGPSFSEPRDCEVIMMVGLPASGKT 274
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRA 340
TWAEKWVKDHPEKRY+LLGTN IL+QMKVPGLLR++NY ERF LM RA IF++LLSRA
Sbjct: 275 TWAEKWVKDHPEKRYVLLGTNSILDQMKVPGLLRRNNYGERFDLLMDRATRIFNILLSRA 334
Query: 341 SRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPA 400
+ PRN+IIDQTNV+KSARKRKL F +++KIAVVVFPKP++LKIRS KRF EMGKEVP
Sbjct: 335 ANIPRNYIIDQTNVYKSARKRKLEPFADYQKIAVVVFPKPDELKIRSDKRFTEMGKEVPP 394
Query: 401 DAVNNMLANYVLPVNKDTPGSDELFDQ 427
DAVN M+ANYVLP +KD P SDE FDQ
Sbjct: 395 DAVNKMIANYVLPKSKDMPRSDEFFDQ 421
>gi|90265186|emb|CAH67657.1| H0410G08.12 [Oryza sativa Indica Group]
Length = 717
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 268/392 (68%), Positives = 316/392 (80%), Gaps = 1/392 (0%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGG-KYCFGCK 95
P Q RV LNPADCDLDFD+ GL+ LH GFAYCWSGARA VG+ GG KYCFGCK
Sbjct: 28 PEPQPARVGLNPADCDLDFDVGGGGLRGEALHDGGFAYCWSGARATVGVRGGGKYCFGCK 87
Query: 96 IVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGE 155
+V+ Q V+MEDT DQQH+CRVG SRG DPVG LGET SFGFGGTGKFSH G F+ +G
Sbjct: 88 VVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVEYGV 147
Query: 156 KFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAV 215
KFGVGDT++CA+DL+SKPLA+IGF++NG+WLG AK FDA GLG+V+S V Q ESA+
Sbjct: 148 KFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQWESAI 207
Query: 216 FPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLP 275
FPH+LLKNVVV MQFS E GL V+GY+ W SA DGN+V GP F K+CE+MMMVGLP
Sbjct: 208 FPHVLLKNVVVEMQFSKEDGLQLVDGYEPWPSACVDGNAVSGPVFAEQKECEIMMMVGLP 267
Query: 276 ASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDV 335
ASGK+TWAEKW+K+H EKR+ILLGTNL L QMKVPGLLRK+NY ERF+ LM RA IF+
Sbjct: 268 ASGKSTWAEKWIKEHKEKRFILLGTNLALVQMKVPGLLRKNNYGERFERLMDRATMIFNT 327
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
LL+RA++ PRN+IIDQTNV+K+AR RKLR F N+RK AVVVFP P +LK+R+ KRFKEMG
Sbjct: 328 LLTRAAKIPRNYIIDQTNVYKNARSRKLRPFANYRKTAVVVFPSPSELKVRAAKRFKEMG 387
Query: 396 KEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
K+VPADAVN M AN+VLP++KD P S E FD+
Sbjct: 388 KDVPADAVNEMTANFVLPLSKDMPDSKEPFDE 419
>gi|222629633|gb|EEE61765.1| hypothetical protein OsJ_16318 [Oryza sativa Japonica Group]
Length = 717
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/392 (68%), Positives = 315/392 (80%), Gaps = 1/392 (0%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGG-KYCFGCK 95
P Q RV LNPADCDLDFD+ GL+ LH GFAYCWSGARA VG+ GG KYCFGCK
Sbjct: 28 PEPQPARVGLNPADCDLDFDVGGGGLRGEALHDGGFAYCWSGARATVGVRGGGKYCFGCK 87
Query: 96 IVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGE 155
+V+ Q V+MEDT DQQH+CRVG SRG DPVG LGET SFGFGGTGKFSH G F+ +G
Sbjct: 88 VVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVEYGV 147
Query: 156 KFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAV 215
KFGVGDT++CA+DL+SKPLA+IGF++NG+WLG AK FDA GLG+V+S V Q ESA+
Sbjct: 148 KFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQWESAI 207
Query: 216 FPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLP 275
FPH+LLKNVVV MQFS E GL V+GY+ W SA DGN+V GP F K+CE+MMMVGLP
Sbjct: 208 FPHVLLKNVVVEMQFSKEDGLQLVDGYELWPSACVDGNAVSGPVFAEQKECEIMMMVGLP 267
Query: 276 ASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDV 335
ASGK+TWAEK +K+H EKR+ILLGTNL L QMKVPGLLRK+NY ERF+ LM RA IF+
Sbjct: 268 ASGKSTWAEKCIKEHKEKRFILLGTNLALVQMKVPGLLRKNNYGERFERLMDRATMIFNT 327
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
LL+RA++ PRN+IIDQTNV+K+AR RKLR F N+RK AVVVFP P +LK+R+ KRFKEMG
Sbjct: 328 LLTRAAKIPRNYIIDQTNVYKNARSRKLRPFANYRKTAVVVFPSPSELKVRAAKRFKEMG 387
Query: 396 KEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
K+VPADAVN M AN+VLP++KD P S E FD+
Sbjct: 388 KDVPADAVNEMTANFVLPLSKDMPDSKEPFDE 419
>gi|297603419|ref|NP_001054013.2| Os04g0636000 [Oryza sativa Japonica Group]
gi|38344809|emb|CAE03010.2| OSJNBa0043L09.29 [Oryza sativa Japonica Group]
gi|255675811|dbj|BAF15927.2| Os04g0636000 [Oryza sativa Japonica Group]
Length = 717
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/392 (68%), Positives = 315/392 (80%), Gaps = 1/392 (0%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGG-KYCFGCK 95
P Q RV LNPADCDLDFD+ GL+ LH GFAYCWSGARA VG+ GG KYCFGCK
Sbjct: 28 PEPQPARVGLNPADCDLDFDVGGGGLRGEALHDGGFAYCWSGARATVGVRGGGKYCFGCK 87
Query: 96 IVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGE 155
+V+ Q V+MEDT DQQH+CRVG SRG DPVG LGET SFGFGGTGKFSH G F+ +G
Sbjct: 88 VVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVEYGV 147
Query: 156 KFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAV 215
KFGVGDT++CA+DL+SKPLA+IGF++NG+WLG AK FDA GLG+V+S V Q ESA+
Sbjct: 148 KFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQWESAI 207
Query: 216 FPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLP 275
FPH+LLKNVVV MQFS E GL V+GY+ W SA DGN+V GP F K+CE+MMMVGLP
Sbjct: 208 FPHVLLKNVVVEMQFSKEDGLQLVDGYELWPSACVDGNAVSGPVFAEQKECEIMMMVGLP 267
Query: 276 ASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDV 335
ASGK+TWAEK +K+H EKR+ILLGTNL L QMKVPGLLRK+NY ERF+ LM RA IF+
Sbjct: 268 ASGKSTWAEKCIKEHKEKRFILLGTNLALVQMKVPGLLRKNNYGERFERLMDRATMIFNT 327
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
LL+RA++ PRN+IIDQTNV+K+AR RKLR F N+RK AVVVFP P +LK+R+ KRFKEMG
Sbjct: 328 LLTRAAKIPRNYIIDQTNVYKNARSRKLRPFANYRKTAVVVFPSPSELKVRAAKRFKEMG 387
Query: 396 KEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
K+VPADAVN M AN+VLP++KD P S E FD+
Sbjct: 388 KDVPADAVNEMTANFVLPLSKDMPDSKEPFDE 419
>gi|414585252|tpg|DAA35823.1| TPA: putative SPRY-domain family protein [Zea mays]
Length = 882
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/419 (63%), Positives = 331/419 (78%), Gaps = 8/419 (1%)
Query: 11 PDGDKPESVVKKAKVD-DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQ 69
PD + + K+ + D +P D++ PR VVLNPADCDLDFD+ GL+ S LH+
Sbjct: 223 PDDESAQPPSKRPRRDAEPEVDAAEPSPR-----VVLNPADCDLDFDVGGGGLRGSALHE 277
Query: 70 EGFAYCWSGARANVGINGG-KYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGK 128
GFAYCWSGARA VG GG +YCFGC+IV+ QPV+M+ T ++H+CR+G SRGDDPVG
Sbjct: 278 GGFAYCWSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGA 337
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LGE++ SFGFGGTGKFSH F+N+G KFGVGDT++CA+DL+SKP+A+IGFA+NG+WLG
Sbjct: 338 LGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGI 397
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSA 248
A+ FDAG GLG+VD+ ++ + SA+FPH+LLKNV+V MQFS E GL+PV+GY+ W SA
Sbjct: 398 ARHFDAGEKGLGLVDAPLRPMRWGSALFPHVLLKNVIVEMQFSREDGLLPVDGYEPWASA 457
Query: 249 LDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMK 308
NSV GP+F K CEVMMMVGLPASGK+TWAEKWVK+H EKRYILLGTNL+LEQMK
Sbjct: 458 FSQRNSVFGPSFEQNK-CEVMMMVGLPASGKSTWAEKWVKEHQEKRYILLGTNLVLEQMK 516
Query: 309 VPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN 368
VPGLLRK+NY ERF+ LM A IF+ LL+RA+ TPRNFIIDQTNV+K+AR RKLR F N
Sbjct: 517 VPGLLRKNNYGERFERLMDYATWIFNKLLTRAANTPRNFIIDQTNVYKNARIRKLRPFAN 576
Query: 369 FRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
+RK AVV+FP P +LK R+ KRF EMGKE+PA+AVN M AN+VLP++KD P S E FD+
Sbjct: 577 YRKTAVVMFPTPSELKSRAAKRFNEMGKEIPAEAVNEMTANFVLPLSKDMPHSKEPFDE 635
>gi|195655209|gb|ACG47072.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 [Zea mays]
gi|224028721|gb|ACN33436.1| unknown [Zea mays]
Length = 663
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 267/419 (63%), Positives = 331/419 (78%), Gaps = 8/419 (1%)
Query: 11 PDGDKPESVVKKAKVD-DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQ 69
PD + + K+ + D +P D++ PR VVLNPADCDLDFD+ GL+ S LH+
Sbjct: 4 PDDESAQPPSKRPRRDAEPEVDAAEPSPR-----VVLNPADCDLDFDVGGGGLRGSALHE 58
Query: 70 EGFAYCWSGARANVGINGG-KYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGK 128
GFAYCWSGARA VG GG +YCFGC+IV+ QPV+M+ T ++H+CR+G SRGDDPVG
Sbjct: 59 GGFAYCWSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGA 118
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LGE++ SFGFGGTGKFSH F+N+G KFGVGDT++CA+DL+SKP+A+IGFA+NG+WLG
Sbjct: 119 LGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGI 178
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSA 248
A+ FDAG GLG+VD+ ++ + SA+FPH+LLKNV+V MQFS E GL+PV+GY+ W SA
Sbjct: 179 ARHFDAGEKGLGLVDAPLRPMRWGSALFPHVLLKNVIVEMQFSREDGLLPVDGYEPWASA 238
Query: 249 LDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMK 308
NSV GP+F K CEVMMMVGLPASGK+TWAEKWVK+H EKRYILLGTNL+LEQMK
Sbjct: 239 FSQRNSVFGPSFEQNK-CEVMMMVGLPASGKSTWAEKWVKEHQEKRYILLGTNLVLEQMK 297
Query: 309 VPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN 368
VPGLLRK+NY ERF+ LM A IF+ LL+RA+ TPRNFIIDQTNV+K+AR RKLR F N
Sbjct: 298 VPGLLRKNNYGERFERLMDYATWIFNKLLTRAANTPRNFIIDQTNVYKNARIRKLRPFAN 357
Query: 369 FRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
+RK AVV+FP P +LK R+ KRF EMGKE+PA+AVN M AN+VLP++KD P S E FD+
Sbjct: 358 YRKTAVVMFPTPSELKSRAAKRFNEMGKEIPAEAVNEMTANFVLPLSKDMPHSKEPFDE 416
>gi|242077338|ref|XP_002448605.1| hypothetical protein SORBIDRAFT_06g029970 [Sorghum bicolor]
gi|241939788|gb|EES12933.1| hypothetical protein SORBIDRAFT_06g029970 [Sorghum bicolor]
Length = 682
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 263/386 (68%), Positives = 319/386 (82%), Gaps = 2/386 (0%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGG-KYCFGCKIVSTQP 101
RVVLNPADCDLDFD++ GL+ S LH+ GFAYCWSGARA VG GG +YCFGC+IV+ QP
Sbjct: 34 RVVLNPADCDLDFDVDGGGLRGSALHEGGFAYCWSGARATVGARGGGRYCFGCRIVAEQP 93
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
V+M+ T P+++H+CR+G SRGDDPVG LGE++ SFGFGGTGKFSH F+N+G KFGVGD
Sbjct: 94 VEMDLTTPEERHLCRIGVSRGDDPVGVLGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGD 153
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
T++CA+DL+SKP+A+IGFA+NG+WLG + FDA GLG+VD+ ++ Q SA+FPH+LL
Sbjct: 154 TVVCAVDLDSKPMASIGFARNGEWLGIVRHFDASEKGLGLVDAPLRPMQWGSALFPHVLL 213
Query: 222 KNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTT 281
KNVVV MQFS E GL+PV+GY+ W SA+ GNSV GP+F K CEVMMMVGLPASGK+T
Sbjct: 214 KNVVVEMQFSREDGLLPVDGYEPWASAVTHGNSVFGPSFEQNK-CEVMMMVGLPASGKST 272
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
WAEKWVK+H EKR+ILLGTNL LEQMKVPGLLRK+NY ERF LM A IF+ LL+RA+
Sbjct: 273 WAEKWVKEHQEKRFILLGTNLALEQMKVPGLLRKNNYGERFDRLMDCATWIFNKLLTRAA 332
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
TPRNFIIDQTNV+K+AR RKLR F N+RK AVVVFP P +LK R+ KRF EMGKEVPA+
Sbjct: 333 NTPRNFIIDQTNVYKNARIRKLRSFANYRKTAVVVFPTPSELKSRAAKRFDEMGKEVPAE 392
Query: 402 AVNNMLANYVLPVNKDTPGSDELFDQ 427
AVN M+AN+VLP++KD P S E FD+
Sbjct: 393 AVNEMIANFVLPLSKDMPNSKEPFDK 418
>gi|195656691|gb|ACG47813.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 [Zea mays]
Length = 625
Score = 566 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/425 (63%), Positives = 333/425 (78%), Gaps = 8/425 (1%)
Query: 11 PDGDKPESVVKKAKVD-DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQ 69
PD + + K+ + D +P D++ PR VVLNPADCDLDFD+ GL+ S LH+
Sbjct: 4 PDDESAQPPSKRPRRDAEPEVDAAEPSPR-----VVLNPADCDLDFDVGGGGLRGSALHE 58
Query: 70 EGFAYCWSGARANVGINGG-KYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGK 128
GFAYCWSGARA VG GG +YCFGC+IV+ QPV+M+ T ++H+CR+G SRGDDPVG
Sbjct: 59 GGFAYCWSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGA 118
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LGE++ SFGFGGTGKFSH F+N+G KFGVGDT++CA+DL+SKP+A+IGFA+NG+WLG
Sbjct: 119 LGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGI 178
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSA 248
A+ FDAG GLG+VD+ ++ + SA+FPH+LLKNV+V MQFS E GL+PV+GY+ W SA
Sbjct: 179 ARHFDAGEKGLGLVDAPLRPMRWGSALFPHVLLKNVIVEMQFSREDGLLPVDGYEPWASA 238
Query: 249 LDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMK 308
NSV GP+F K CEVMMMVGLPASGK+TWAEKWVK+H EKRYILLGTNL+LEQMK
Sbjct: 239 FSQRNSVFGPSFEQNK-CEVMMMVGLPASGKSTWAEKWVKEHQEKRYILLGTNLVLEQMK 297
Query: 309 VPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN 368
VPGLLRK+NY ERF+ LM A IF+ LL+RA+ TPRNFIIDQTNV+K+AR RKLR F N
Sbjct: 298 VPGLLRKNNYGERFERLMDCATWIFNKLLTRAANTPRNFIIDQTNVYKNARIRKLRPFAN 357
Query: 369 FRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQR 428
+RK AVV+FP P +LK R+ KRF EMGKE+PA+AVN M AN+VLP++KD P S E FD+
Sbjct: 358 YRKTAVVMFPTPSELKSRAAKRFNEMGKEIPAEAVNEMTANFVLPLSKDMPHSKEPFDEY 417
Query: 429 RGSAA 433
+ A
Sbjct: 418 SSTYA 422
>gi|414585251|tpg|DAA35822.1| TPA: putative SPRY-domain family protein [Zea mays]
Length = 697
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/419 (63%), Positives = 331/419 (78%), Gaps = 8/419 (1%)
Query: 11 PDGDKPESVVKKAKVD-DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQ 69
PD + + K+ + D +P D++ PR VVLNPADCDLDFD+ GL+ S LH+
Sbjct: 223 PDDESAQPPSKRPRRDAEPEVDAAEPSPR-----VVLNPADCDLDFDVGGGGLRGSALHE 277
Query: 70 EGFAYCWSGARANVGINGG-KYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGK 128
GFAYCWSGARA VG GG +YCFGC+IV+ QPV+M+ T ++H+CR+G SRGDDPVG
Sbjct: 278 GGFAYCWSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGA 337
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LGE++ SFGFGGTGKFSH F+N+G KFGVGDT++CA+DL+SKP+A+IGFA+NG+WLG
Sbjct: 338 LGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGI 397
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSA 248
A+ FDAG GLG+VD+ ++ + SA+FPH+LLKNV+V MQFS E GL+PV+GY+ W SA
Sbjct: 398 ARHFDAGEKGLGLVDAPLRPMRWGSALFPHVLLKNVIVEMQFSREDGLLPVDGYEPWASA 457
Query: 249 LDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMK 308
NSV GP+F K CEVMMMVGLPASGK+TWAEKWVK+H EKRYILLGTNL+LEQMK
Sbjct: 458 FSQRNSVFGPSFEQNK-CEVMMMVGLPASGKSTWAEKWVKEHQEKRYILLGTNLVLEQMK 516
Query: 309 VPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN 368
VPGLLRK+NY ERF+ LM A IF+ LL+RA+ TPRNFIIDQTNV+K+AR RKLR F N
Sbjct: 517 VPGLLRKNNYGERFERLMDYATWIFNKLLTRAANTPRNFIIDQTNVYKNARIRKLRPFAN 576
Query: 369 FRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
+RK AVV+FP P +LK R+ KRF EMGKE+PA+AVN M AN+VLP++KD P S E FD+
Sbjct: 577 YRKTAVVMFPTPSELKSRAAKRFNEMGKEIPAEAVNEMTANFVLPLSKDMPHSKEPFDE 635
>gi|326518482|dbj|BAJ88270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 608
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/402 (63%), Positives = 311/402 (77%), Gaps = 4/402 (0%)
Query: 28 PVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGIN- 86
P +GP + RV LNPADC+LDFD+ +GL+ LH GFAYCWSGARA G+
Sbjct: 17 PRHHGDHAGP--EPARVQLNPADCNLDFDVGASGLRGEALHGGGFAYCWSGARATAGVRR 74
Query: 87 GGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETE-QSFGFGGTGKFS 145
GG+YCFGC++V+ Q V+M+DT Q+H+CRVG SRGD PVG LGE SFGFGGT K S
Sbjct: 75 GGRYCFGCRVVAEQAVEMDDTEAGQRHLCRVGVSRGDYPVGDLGEAGGHSFGFGGTRKLS 134
Query: 146 HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSA 205
H G F ++G +FGVGDTI+CA+DL++K +A+IGFAKNG+WLG AK FDA GLG+VD+
Sbjct: 135 HQGRFFDYGARFGVGDTIVCAVDLDTKSMASIGFAKNGEWLGIAKYFDASHKGLGLVDAP 194
Query: 206 VKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKD 265
V+ Q ESA+FPH+LLKNVVV MQFS E GL P++GYK W SA DGN+V GP F K+
Sbjct: 195 VRPMQWESAIFPHVLLKNVVVEMQFSREDGLEPIDGYKPWTSAFADGNAVFGPVFDEQKE 254
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEVMMMVGLPASGK+TWAEK V++HPEKR++LLGTNL L+QMKVPGLLRK+NY E F L
Sbjct: 255 CEVMMMVGLPASGKSTWAEKQVREHPEKRFVLLGTNLALDQMKVPGLLRKNNYGEHFDRL 314
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKI 385
M A IF+ LL RA++ PRN+I+DQTNV+KSAR RKLR F N+ KIAVVVFP P +L
Sbjct: 315 MDHATQIFNTLLDRAAKIPRNYILDQTNVYKSARIRKLRPFANYYKIAVVVFPSPNELNS 374
Query: 386 RSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
R+ KR KEMGK+VPA+AV+ M AN+VLP++KD PGS E FD+
Sbjct: 375 RAAKRSKEMGKDVPAEAVDQMTANFVLPLSKDMPGSKEPFDE 416
>gi|326490822|dbj|BAJ90078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 306/402 (76%), Gaps = 4/402 (0%)
Query: 28 PVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGIN- 86
P +GP Q RV LNPADC+LDFD+ GL+ LH GFAYCWSGARA G+
Sbjct: 17 PRHHGDHAGP--QPARVQLNPADCNLDFDVGAGGLRGEALHGGGFAYCWSGARATAGVRR 74
Query: 87 GGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTG-KFS 145
GG+YCFGC++V+ Q V+M+DT Q+H+CRVG SRGDDPVG LGE G K S
Sbjct: 75 GGRYCFGCRVVAEQAVEMDDTEAGQRHLCRVGVSRGDDPVGGLGEGGGHSFGFGGTGKLS 134
Query: 146 HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSA 205
H G F ++G +FG+GDTI+CA+DL+SKP+A+IGFAKNG+WLG AK FDA GLG+VD+
Sbjct: 135 HQGRFFDYGARFGIGDTIVCAVDLDSKPMASIGFAKNGEWLGIAKYFDASHKGLGLVDAP 194
Query: 206 VKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKD 265
V+ Q ESA+FPH+LLKNVVV MQFS E GL PV+GY+ W SA DGN V GP F K+
Sbjct: 195 VRPMQWESAIFPHVLLKNVVVEMQFSREDGLEPVDGYEPWTSAFADGNVVFGPVFDEQKE 254
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEVMMMVGLPASGK+TWAEK V++HPEKR++LLGTNL L+QMKVPGLLRK+NY ERF L
Sbjct: 255 CEVMMMVGLPASGKSTWAEKQVREHPEKRFVLLGTNLALDQMKVPGLLRKNNYGERFDRL 314
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKI 385
M A IF+ LL RA++ PRN+I+DQTNV+KSAR RKLR F N+ KIAVVVFP P +L
Sbjct: 315 MDHATQIFNTLLDRAAKIPRNYILDQTNVYKSARIRKLRPFANYYKIAVVVFPSPNELNS 374
Query: 386 RSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
R+ KR KEMGK+VPA+AV+ M AN+VLP++KD PGS E FD+
Sbjct: 375 RAAKRSKEMGKDVPAEAVDQMTANFVLPLSKDMPGSKEPFDE 416
>gi|326528897|dbj|BAJ97470.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 306/402 (76%), Gaps = 4/402 (0%)
Query: 28 PVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGIN- 86
P +GP Q RV LNPADC+LDFD+ GL+ LH GFAYCWSGARA G+
Sbjct: 17 PRHHGDHAGP--QPARVQLNPADCNLDFDVGAGGLRGEALHGGGFAYCWSGARATAGVRR 74
Query: 87 GGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTG-KFS 145
GG+YCFGC++V+ Q V+M+DT Q+H+CRVG SRGDDPVG LGE G K S
Sbjct: 75 GGRYCFGCRVVAEQAVEMDDTEAGQRHLCRVGVSRGDDPVGGLGEGGGHSFGFGGTGKLS 134
Query: 146 HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSA 205
H G F ++G +FG+GDTI+CA+DL+SKP+A+IGFAKNG+WLG AK FDA GLG+VD+
Sbjct: 135 HQGRFFDYGARFGIGDTIVCAVDLDSKPMASIGFAKNGEWLGIAKYFDASHKGLGLVDAP 194
Query: 206 VKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKD 265
V+ Q ESA+FPH+LLKNVVV MQFS E GL PV+GY+ W SA DGN V GP F K+
Sbjct: 195 VRPMQWESAIFPHVLLKNVVVEMQFSREDGLEPVDGYEPWTSAFADGNVVFGPVFDEQKE 254
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEVMMMVGLPASGK+TWAEK V++HPEKR++LLGTNL L+QMKVPGLLRK+NY ERF L
Sbjct: 255 CEVMMMVGLPASGKSTWAEKQVREHPEKRFVLLGTNLALDQMKVPGLLRKNNYGERFDRL 314
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKI 385
M A IF+ LL RA++ PRN+I+DQTNV+KSAR RKLR F N+ KIAVVVFP P +L
Sbjct: 315 MDHATQIFNTLLDRAAKIPRNYILDQTNVYKSARIRKLRPFANYYKIAVVVFPSPNELNS 374
Query: 386 RSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
R+ KR KEMGK+VPA+AV+ M AN+VLP++KD PGS E FD+
Sbjct: 375 RAAKRSKEMGKDVPAEAVDQMTANFVLPLSKDMPGSKEPFDE 416
>gi|414585250|tpg|DAA35821.1| TPA: putative SPRY-domain family protein [Zea mays]
Length = 579
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/363 (63%), Positives = 287/363 (79%), Gaps = 8/363 (2%)
Query: 11 PDGDKPESVVKKAKVD-DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQ 69
PD + + K+ + D +P D++ PR VVLNPADCDLDFD+ GL+ S LH+
Sbjct: 223 PDDESAQPPSKRPRRDAEPEVDAAEPSPR-----VVLNPADCDLDFDVGGGGLRGSALHE 277
Query: 70 EGFAYCWSGARANVGINGG-KYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGK 128
GFAYCWSGARA VG GG +YCFGC+IV+ QPV+M+ T ++H+CR+G SRGDDPVG
Sbjct: 278 GGFAYCWSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGA 337
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LGE++ SFGFGGTGKFSH F+N+G KFGVGDT++CA+DL+SKP+A+IGFA+NG+WLG
Sbjct: 338 LGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGI 397
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSA 248
A+ FDAG GLG+VD+ ++ + SA+FPH+LLKNV+V MQFS E GL+PV+GY+ W SA
Sbjct: 398 ARHFDAGEKGLGLVDAPLRPMRWGSALFPHVLLKNVIVEMQFSREDGLLPVDGYEPWASA 457
Query: 249 LDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMK 308
NSV GP+F K CEVMMMVGLPASGK+TWAEKWVK+H EKRYILLGTNL+LEQMK
Sbjct: 458 FSQRNSVFGPSFEQNK-CEVMMMVGLPASGKSTWAEKWVKEHQEKRYILLGTNLVLEQMK 516
Query: 309 VPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN 368
VPGLLRK+NY ERF+ LM A IF+ LL+RA+ TPRNFIIDQTNV+K+AR RKLR F N
Sbjct: 517 VPGLLRKNNYGERFERLMDYATWIFNKLLTRAANTPRNFIIDQTNVYKNARIRKLRPFAN 576
Query: 369 FRK 371
+RK
Sbjct: 577 YRK 579
>gi|414586946|tpg|DAA37517.1| TPA: putative SPRY-domain family protein [Zea mays]
Length = 385
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 259/324 (79%), Gaps = 1/324 (0%)
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
M+ T ++H+CR+G SRGDDPVG LGE++ SFGFGGTGKFSH F+N+G KFGVGDT+
Sbjct: 1 MDPTTSGERHLCRIGVSRGDDPVGALGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGDTV 60
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
+CA+DL+SKP+ +IGFA+NG+WLG A+ FDAG GLG+VD+ ++ + A+FPH+LLKN
Sbjct: 61 VCAVDLDSKPMTSIGFARNGEWLGIARHFDAGEKGLGLVDAPLRLMRWGFALFPHVLLKN 120
Query: 224 VVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWA 283
V+V MQFS E GL+PV+GY+ W SA NS GP+F K CEVMMMVGLP SGK+TWA
Sbjct: 121 VIVEMQFSREDGLLPVDGYEPWASAFSQRNSEFGPSFEQNK-CEVMMMVGLPTSGKSTWA 179
Query: 284 EKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRT 343
EKWVK+H EKRYILLGTNL+LEQMKVPGLLRK+NY ERF+ LM A IF+ LL+RA+ T
Sbjct: 180 EKWVKEHQEKRYILLGTNLVLEQMKVPGLLRKNNYGERFERLMDCATWIFNKLLTRAANT 239
Query: 344 PRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAV 403
PRNFIIDQTNV+K+AR RKLR F N+R VV+FP P +LK R+ K F EMGKE+PA+AV
Sbjct: 240 PRNFIIDQTNVYKNARIRKLRPFANYRNTVVVMFPTPSELKSRAAKLFNEMGKEIPAEAV 299
Query: 404 NNMLANYVLPVNKDTPGSDELFDQ 427
N M AN+VLP++KD P S E FD+
Sbjct: 300 NEMTANFVLPLSKDMPHSKEPFDE 323
>gi|414586947|tpg|DAA37518.1| TPA: putative SPRY-domain family protein [Zea mays]
Length = 267
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 217/267 (81%), Gaps = 1/267 (0%)
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
M+ T ++H+CR+G SRGDDPVG LGE++ SFGFGGTGKFSH F+N+G KFGVGDT+
Sbjct: 1 MDPTTSGERHLCRIGVSRGDDPVGALGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGDTV 60
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
+CA+DL+SKP+ +IGFA+NG+WLG A+ FDAG GLG+VD+ ++ + A+FPH+LLKN
Sbjct: 61 VCAVDLDSKPMTSIGFARNGEWLGIARHFDAGEKGLGLVDAPLRLMRWGFALFPHVLLKN 120
Query: 224 VVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWA 283
V+V MQFS E GL+PV+GY+ W SA NS GP+F K CEVMMMVGLP SGK+TWA
Sbjct: 121 VIVEMQFSREDGLLPVDGYEPWASAFSQRNSEFGPSFEQNK-CEVMMMVGLPTSGKSTWA 179
Query: 284 EKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRT 343
EKWVK+H EKRYILLGTNL+LEQMKVPGLLRK+NY ERF+ LM A IF+ LL+RA+ T
Sbjct: 180 EKWVKEHQEKRYILLGTNLVLEQMKVPGLLRKNNYGERFERLMDCATWIFNKLLTRAANT 239
Query: 344 PRNFIIDQTNVFKSARKRKLRLFVNFR 370
PRNFIIDQTNV+K+AR RKLR F N+R
Sbjct: 240 PRNFIIDQTNVYKNARIRKLRPFANYR 266
>gi|357162261|ref|XP_003579355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Brachypodium distachyon]
Length = 452
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 153/236 (64%), Positives = 188/236 (79%)
Query: 192 FDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDD 251
FD+ GLG+VD+ V+ Q ESA+FPH+LLKNV+V MQFS E GL PV+GY+ W SA D
Sbjct: 21 FDSSEKGLGLVDAPVRPMQWESAIFPHVLLKNVIVEMQFSKEDGLEPVDGYEPWSSAFAD 80
Query: 252 GNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPG 311
GN+V GP F +CEV MMVGLPASGK+TWAE+WVK+HPEKR++LLGTNL L+QMKVPG
Sbjct: 81 GNAVSGPMFVEQGECEVRMMVGLPASGKSTWAEQWVKEHPEKRFVLLGTNLALDQMKVPG 140
Query: 312 LLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRK 371
LLRKHNY ERF L A AIF+ LL RA++ PRN+IIDQTNV++SAR RKLR F N+RK
Sbjct: 141 LLRKHNYGERFDRLRDHATAIFNKLLDRAAKVPRNYIIDQTNVYRSARIRKLRPFANYRK 200
Query: 372 IAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
IAVV+FP P +L R+ KRFKEMGK+VPA+AV+ M AN+VLP++K P + E FD+
Sbjct: 201 IAVVMFPLPSELNSRAAKRFKEMGKDVPAEAVDQMTANFVLPLSKHMPDTKEPFDE 256
>gi|212721678|ref|NP_001131475.1| uncharacterized protein LOC100192810 [Zea mays]
gi|194691630|gb|ACF79899.1| unknown [Zea mays]
Length = 307
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/233 (65%), Positives = 186/233 (79%), Gaps = 1/233 (0%)
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNS 254
G GLG+VD+ ++ + SA+FPH+LLKNV+V MQFS E GL+PV+GY+ W SA NS
Sbjct: 14 GEKGLGLVDTPLRPMRWGSALFPHVLLKNVIVEMQFSREDGLLPVDGYEPWASAFSQRNS 73
Query: 255 VLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLR 314
GP+F K CEVMMMVGLPA+GK+TWAEKWVK+H EKRYILLGTNL+LEQMKVPGLLR
Sbjct: 74 EFGPSFEQNK-CEVMMMVGLPATGKSTWAEKWVKEHQEKRYILLGTNLVLEQMKVPGLLR 132
Query: 315 KHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAV 374
K+NY ERF+ LM A IF+ LL+RA+ TPRNFIIDQTNV+K+AR RKLR F N+RK V
Sbjct: 133 KNNYGERFERLMDCATWIFNKLLTRAANTPRNFIIDQTNVYKNARIRKLRPFANYRKTDV 192
Query: 375 VVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
V+FP P +LK R+ KRF EMGKE+PA+AVN M AN+VLP++KD P S E FD+
Sbjct: 193 VMFPTPSELKSRAAKRFNEMGKEIPAEAVNEMTANFVLPLSKDMPHSKEPFDE 245
>gi|291233755|ref|XP_002736820.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 730
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 226/382 (59%), Gaps = 26/382 (6%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKI 96
P SQ R+ L+ + DL I +G+ +H +GF Y W+G RA+ G+ GK CF C +
Sbjct: 5 PASQANRITLDDYNSDLHISIGPDGVTGWDMHDKGFEYLWAGVRASHGVARGKVCFECTV 64
Query: 97 VSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEK 156
V PVDM DT +HVCRVG S +LGE+ S+G+GGTGK S FL++G+
Sbjct: 65 VENSPVDMPDTE-SAKHVCRVGWSV-HSSNSQLGESNLSYGYGGTGKSSSNNKFLDYGQP 122
Query: 157 FGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVF 216
+GVGDTI C +DLE+ P A I FAKNG++LG A NG +F
Sbjct: 123 YGVGDTITCYLDLEANPKA-IFFAKNGQYLGVAFNLGPEING--------------KTLF 167
Query: 217 PHILLKNVVVVMQFSVEQGLIPVE-GYK--SWVSALDDGNSVLGPTFCNMK--DCEVMMM 271
PHI +KN + F P+ G++ W+ +++L T + + D E++MM
Sbjct: 168 PHINVKNTKFEVNFGDRSPRFPLTPGFQMIQWLPP----HALLQATIPSTRKEDHEIIMM 223
Query: 272 VGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANA 331
VGLP +GK+TWAE++ + HPEK + +LGTN I+++MKV GL R+ NY R+ L+ +A
Sbjct: 224 VGLPGAGKSTWAEEYARKHPEKNFYILGTNAIIDKMKVMGLKRQKNYHGRWDVLIKQATD 283
Query: 332 IFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRF 391
+ + A R RN+I+DQTNV+ +AR+RK+ F +R+IA VV PE+LK R+ KR
Sbjct: 284 CLNKIFKVAERRVRNYILDQTNVYFTARRRKMNNFKGYRRIAAVVVNTPEELKKRTEKRE 343
Query: 392 KEMGKEVPADAVNNMLANYVLP 413
K+ GK VP AV M+AN+ LP
Sbjct: 344 KDEGKFVPESAVKEMMANFSLP 365
>gi|196016009|ref|XP_002117859.1| hypothetical protein TRIADDRAFT_61890 [Trichoplax adhaerens]
gi|190579528|gb|EDV19621.1| hypothetical protein TRIADDRAFT_61890 [Trichoplax adhaerens]
Length = 906
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/390 (42%), Positives = 236/390 (60%), Gaps = 27/390 (6%)
Query: 45 VLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDM 104
VL+ + DL I +GL + ++ GFAY W G RA G GK + KI+ V++
Sbjct: 289 VLDRYNSDLHVKISKDGLITEDYYKGGFAYLWGGIRATYGAKSGKVFYEIKILQFSSVEL 348
Query: 105 EDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTII 164
D P ++ RVG S D P +LGE + S+GFG +GK + NF ++G++FGVGD I
Sbjct: 349 PD-PETHKNALRVGWSV-DSPYFQLGEDKYSYGFGSSGKAATTSNFFSYGKEFGVGDVIG 406
Query: 165 CAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNV 224
C +DLES+P +T+GF KNG+ LG+A Q VD + K A+FPHI LKN
Sbjct: 407 CYLDLESEP-STVGFMKNGEDLGSAFQL--------AVDLSGK------ALFPHIYLKNA 451
Query: 225 VVVMQFSVEQGLI---PVEGYKSWVSALDDGN---SVLGPTFCNMKDCEVMMMVGLPASG 278
V + F E G I P +GY S++ L +V GPT + DCEV+MM+GLP +G
Sbjct: 452 RVQVNFGNE-GEIWYNPPDGY-SYIGGLRPDQLERAVTGPTKDD--DCEVLMMIGLPGAG 507
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWAEK KD+P+KR+ +LGTNLI+E+M+V GL RK+NY RFQ L+ + L
Sbjct: 508 KTTWAEKHSKDNPDKRFYVLGTNLIMERMRVTGLQRKYNYQGRFQELISLSTECLGKLFE 567
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A R RN+I+DQTNV+ SA+K K+R F FRK A++V P+ ++L+ RS + ++ K++
Sbjct: 568 VAGRMKRNYILDQTNVYASAQKNKMRWFAGFRKKAIIVVPRHDELQKRSSIQKEKENKDI 627
Query: 399 PADAVNNMLANYVLPVNKDTPGSDELFDQR 428
P++ + M N+ LP+ D + E ++R
Sbjct: 628 PSETIREMKFNFTLPIVGDIFEAVEYVEER 657
>gi|326668186|ref|XP_003198760.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Danio rerio]
Length = 877
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 221/375 (58%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
VV++ +CDL F + + L EGFAY W+GARA G+N G+ CF KI PV
Sbjct: 273 VVIDTYNCDLHFKVARDRYSGYPLTIEGFAYLWAGARATYGVNKGRVCFEMKINEEIPVK 332
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE SFG+GGTGK S F ++GEKF D
Sbjct: 333 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSFGYGGTGKKSCNCKFEDYGEKFTESDI 390
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ C ID ES I F+KNGK LG+ + +E A+FPH+L+K
Sbjct: 391 LGCYIDFESSEEIEIAFSKNGKSLGSCYR-------------VSREELAGRALFPHVLVK 437
Query: 223 NVVVVMQFSV--EQGLIPVEG--YKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F E P EG Y +S D +GP N DCE++MMVGLP SG
Sbjct: 438 NCAVEFNFGQREEPYFPPPEGFTYLQDISLEDRVRGSVGP--ANKTDCEILMMVGLPGSG 495
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K+ K++PEK++ +LGTN I+E+MKV GL R+ NY+ R+ L+ +A + L+
Sbjct: 496 KTTWALKYAKENPEKKFNILGTNAIMEKMKVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 555
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 556 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTLKRTDEEGKDV 615
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+VLP
Sbjct: 616 PDHAVLEMKANFVLP 630
>gi|410910498|ref|XP_003968727.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Takifugu rubripes]
Length = 894
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 219/374 (58%), Gaps = 20/374 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY W+GARA GI G+ C+ KI PV
Sbjct: 295 VTIDTYNCDLHFKVSRDRYSGYPLTLEGFAYLWAGARATHGIIQGRVCYEMKINEEIPVK 354
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ + PD HV R+G S +LGE SFG+GGTGK S F +FGEKFG D
Sbjct: 355 HLPSSEPDP-HVVRIGWSINHSST-QLGEEAFSFGYGGTGKKSENCKFSDFGEKFGENDV 412
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C ID ES +G++KNG LGV KE A+FPH+L+K
Sbjct: 413 IGCYIDFESGEEVEMGYSKNGV-------------SLGVAFRTTKEALAGRALFPHVLVK 459
Query: 223 NVVVVMQFSVEQG--LIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGK 279
N V F + P EGY +++ L+ + + G K +CE++MMVGLPA GK
Sbjct: 460 NCAVEFNFGQKSQPYFPPPEGY-TYIHNLEMEDKIRGTKGPATKSECEILMMVGLPACGK 518
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K +++PEK+Y +LGTN I+++MKV GL R+ NY+ R+ L+ +A + L+
Sbjct: 519 TTWAVKHAEENPEKKYNILGTNAIMDKMKVMGLRRQRNYAGRWDILIQQATQCLNRLIEI 578
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R RN+I+DQTNV+ SAR+RK+R F F++ A+V+FP EDLK R++K+ E GK+VP
Sbjct: 579 AARKRRNYILDQTNVYGSARRRKMRPFEGFQRKAIVIFPTDEDLKERTLKQTNEQGKDVP 638
Query: 400 ADAVNNMLANYVLP 413
AV M AN+ LP
Sbjct: 639 DHAVLEMKANFTLP 652
>gi|291190809|ref|NP_001167405.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1 [Salmo
salar]
gi|223648300|gb|ACN10908.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1 [Salmo
salar]
Length = 899
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/374 (42%), Positives = 222/374 (59%), Gaps = 20/374 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+N G+ CF KI V
Sbjct: 293 VAIDTYNCDLHFKVSRDRYSGYPLTIEGFAYLWSGARASYGVNKGQVCFEMKINEEISVK 352
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ + PD HV R+G S D +LGE + S+G+GGTGK S F ++GEKF D
Sbjct: 353 HLPSSEPDP-HVVRIGWSL-DTCNTQLGEEQFSYGYGGTGKKSSNCKFEDYGEKFCENDV 410
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ C ID +S + F+KNGKWL A + +E + +FPH+L+K
Sbjct: 411 LGCYIDFDSGDEVEMAFSKNGKWLDVAFR-------------VSREELAKQPLFPHVLVK 457
Query: 223 NVVVVMQF-SVEQGLIPV-EGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGK 279
N + F E+ P+ EGY +++ + N + G K DCE++MMVGLPASGK
Sbjct: 458 NCAIEFNFGQKEEPFFPLPEGY-TFIQNVPLENRIRGTVGPATKADCELLMMVGLPASGK 516
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K +HP K+Y +LGTN I+E+MKV GL R+ NY+ R+ L+ +A + L+
Sbjct: 517 TTWASKHATEHPAKKYNILGTNAIMEKMKVMGLRRQKNYAGRWDVLIQQATQCLNRLIQI 576
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+VP
Sbjct: 577 AARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKERTLKRTDEEGKDVP 636
Query: 400 ADAVNNMLANYVLP 413
AV M AN+VLP
Sbjct: 637 DHAVLEMKANFVLP 650
>gi|47221067|emb|CAG12761.1| unnamed protein product [Tetraodon nigroviridis]
Length = 605
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 216/377 (57%), Gaps = 18/377 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V ++ +CDL F + + L EGFAY W+GARA G+ G+ C+ KI PV
Sbjct: 210 VTIDTYNCDLHFKVSRDRYSGYPLTLEGFAYLWAGARATHGVIQGRVCYEMKINEEIPVK 269
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ HV R+G S +LGE SFG+GGTGK S F +FGEKFG D I
Sbjct: 270 HLPSSEPDPHVVRIGWSINHSST-QLGEEAFSFGYGGTGKKSENCKFSDFGEKFGENDVI 328
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C ID ES + ++KNG LGV KE A+FPH+L+KN
Sbjct: 329 GCYIDFESGEEVEMSYSKNGV-------------SLGVAFRTTKEALAGRALFPHVLVKN 375
Query: 224 VVVVMQFSVEQG--LIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKT 280
V F + P EGY +++ L+ + + G K +CE++MMVGLPA GKT
Sbjct: 376 CAVEFNFGQKSQPYFPPPEGY-TYIHNLEMEDKIRGTKGPGTKSECEILMMVGLPACGKT 434
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRA 340
TWA K +++PEK+Y +LGTN I+++MKV GL R+ NY+ R+ L+ +A + L+ A
Sbjct: 435 TWAVKHAEENPEKKYNILGTNAIMDKMKVMGLRRQRNYAGRWDILIQQATQCLNRLIEIA 494
Query: 341 SRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPA 400
+R RN+I+DQTNV+ SAR+RK+R F F++ A+V+FP EDLK R++K+ E GK+VP
Sbjct: 495 ARKRRNYILDQTNVYGSARRRKMRPFEGFQRKAIVIFPTDEDLKERTLKQTNEQGKDVPD 554
Query: 401 DAVNNMLANYVLPVNKD 417
AV M AN+ LP D
Sbjct: 555 HAVLEMKANFTLPETCD 571
>gi|348543403|ref|XP_003459173.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
[Oreochromis niloticus]
Length = 867
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/374 (42%), Positives = 219/374 (58%), Gaps = 20/374 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY W+GARA G+ G+ C+ KI PV
Sbjct: 271 VTIDTYNCDLHFKVSRDRYSGYPLTIEGFAYLWAGARATHGVTQGRVCYEMKINEEIPVK 330
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ + PD HV R+G S +LGE SFG+GGTGK S F +FGEKFG D
Sbjct: 331 HLPSSEPDP-HVVRIGWSLNHCST-QLGEEPFSFGYGGTGKKSVDCKFSDFGEKFGENDV 388
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C ID +S +GF+KNG +LG A + KE A+FPH+L+K
Sbjct: 389 IGCYIDFDSGDEVEMGFSKNGVYLGVAFR-------------TTKEALAGRALFPHVLVK 435
Query: 223 NVVVVMQFSV--EQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPASGK 279
N V F E P EGY +++ LD + + G + +CE++MMVGLPA GK
Sbjct: 436 NCAVEFNFGQKREPYFPPQEGY-TFIHNLDMEDKIRGTKGPASKSECEILMMVGLPACGK 494
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K + +PEK+Y +LGTN I+++MKV GL R+ NY+ R+ L+ +A + L+
Sbjct: 495 TTWAAKHAESNPEKKYNILGTNAIMDKMKVMGLRRQRNYAGRWDVLIQQATQCLNRLIEI 554
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R RN+I+DQTNV+ SAR+RK+R F F++ A+V+ P EDLK R++K+ E GK+VP
Sbjct: 555 AARKRRNYILDQTNVYGSARRRKMRPFEGFQRKAIVICPTDEDLKERTLKQTNEQGKDVP 614
Query: 400 ADAVNNMLANYVLP 413
AV M AN+ LP
Sbjct: 615 DHAVLEMKANFTLP 628
>gi|443733989|gb|ELU18138.1| hypothetical protein CAPTEDRAFT_184820 [Capitella teleta]
Length = 733
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 217/384 (56%), Gaps = 16/384 (4%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGL-HQEGFAYCWSGARANVGINGGKYCFGCK 95
P RVVL+ + DL I +G L H GF +CW+GARA+ G+ GK CF
Sbjct: 11 PEVDPDRVVLDHYNSDLHLQISKDGYSGEALTHPTGFCFCWAGARASYGVCTGKVCFEVV 70
Query: 96 IVSTQPVDM-EDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFG 154
I PVD E+ H+ RVG S D +LGE + SFG+GGTGKFS G F NFG
Sbjct: 71 IAEHLPVDFGEEHQEANPHLVRVGWSL-DSTSFQLGEEQNSFGYGGTGKFSSAGKFTNFG 129
Query: 155 EKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESA 214
E FG GD I+ +D + P + F KNG WLG A+ L + +A K A
Sbjct: 130 ETFGKGDVIMAMVDFTTMP-PRLTFMKNGVWLGVAEN-------LHQIKTASKMH----A 177
Query: 215 VFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVG 273
+FPHIL KN + F + P +++ L V G K +CE++M+VG
Sbjct: 178 LFPHILSKNCRFEVNFGQREPYFPPPSGFTFIEHLPLEERVRGMLSPARKAECEIIMIVG 237
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP +GKTTW+ K K+ P+KRY ++GT+ ++++M+V G+ RK+NY R+ L+ +A
Sbjct: 238 LPGAGKTTWSLKMSKEQPDKRYNVIGTDTLIDKMRVMGMARKNNYHGRWDTLIQKATNCL 297
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ L S+ RNFI+DQTNV+ SAR+RK++ FV F+++ V+ P+ +LK R +R E
Sbjct: 298 NKLFQIGSKRKRNFILDQTNVYASARRRKMKSFVGFKRLCAVIQPEDNELKQREWRRTHE 357
Query: 394 MGKEVPADAVNNMLANYVLPVNKD 417
GK VP +AV M ANY LP + D
Sbjct: 358 DGKFVPEEAVLEMKANYSLPQDSD 381
>gi|115754759|ref|XP_783923.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Strongylocentrotus purpuratus]
Length = 944
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 216/376 (57%), Gaps = 24/376 (6%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
+ VL+ DL+ I +G L EGFAY W G +A G+N GK F CK+ S
Sbjct: 246 QCVLSKYLSDLNLKIGKDGYNICPLSMEGFAYMWGGVKATHGVNKGKVAFECKLESQ--A 303
Query: 103 DMEDTPPDQ--QHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVG 160
D+ PP++ +HV RVG S D +LGE + SFG+GGTGK S F++FGEKFGVG
Sbjct: 304 DVRHLPPEENNRHVVRVGWSI-DASSLQLGEEDFSFGYGGTGKASVKCKFVDFGEKFGVG 362
Query: 161 DTIICAIDLE-SKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHI 219
D I +D E KP TI + KNG LG A + NG A+FPH
Sbjct: 363 DVIGAYVDFEGEKP--TISYTKNGTDLGVAFTIEEDLNG--------------QALFPHF 406
Query: 220 LLKNVVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPAS 277
++KN+ V + F E+ P++ S++ L ++ GP KDCE++MMVGLP S
Sbjct: 407 MVKNISVEVNFGQKEEPYFPLKEGFSFLGQLPAEDTERGPKPPATKKDCELLMMVGLPGS 466
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLL 337
GKTTW K K+ +K+Y +LGTNLI+++MKV GL R NY+ RF LM A +
Sbjct: 467 GKTTWTIKACKEMTDKKYYILGTNLIMDKMKVMGLRRSRNYAGRFDKLMDLATKCLNRFF 526
Query: 338 SRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKE 397
A+R RN+I+DQTNV+ SAR+RK+R F F A+V+ P E+ K R KR KE GK+
Sbjct: 527 EVAARKRRNYILDQTNVYPSARRRKMRPFEGFSTKAIVLVPSEEEFKKRIEKRTKEEGKD 586
Query: 398 VPADAVNNMLANYVLP 413
VP AVN M AN+ LP
Sbjct: 587 VPDHAVNEMKANFELP 602
>gi|47086105|ref|NP_998436.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 [Danio
rerio]
gi|46249989|gb|AAH68436.1| Heterogeneous nuclear ribonucleoprotein U-like 1 [Danio rerio]
Length = 784
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/373 (42%), Positives = 216/373 (57%), Gaps = 19/373 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ + DL F + + L EGFAY WSGARA G+N G+ C+ K+ V
Sbjct: 201 VAIDTYNSDLHFKVSPDHCSGYPLTIEGFAYLWSGARATYGVNKGRVCYELKVKEYISVK 260
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ + PD HV RVG S D +LGE S+G+GGTGK S F ++GEKFG GD
Sbjct: 261 HLPSSEPDP-HVVRVGWSL-DSCSTQLGEEAFSYGYGGTGKKSTNYKFGDYGEKFGEGDI 318
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C ID +S + F+KNGKWL A + KE A+FPH+L+K
Sbjct: 319 IGCYIDFDSHEQVEMAFSKNGKWLDVAFR-------------VSKEELAGQALFPHVLVK 365
Query: 223 NVVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKT 280
N V F E+ P+ S++ + N V G + K DC+V+MMVGLPA GKT
Sbjct: 366 NCAVEFNFGQREEPYFPLPDGYSFIGDVSLENRVRGTVGPSSKSDCQVLMMVGLPACGKT 425
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRA 340
TWA K + +P+KR+ +LGTN I+E+MKV GL R+ NY+ R+ L+ +A + LL A
Sbjct: 426 TWAAKHAEMNPDKRFNILGTNAIMEKMKVMGLRRQRNYAGRWDILIQQATQCLNRLLQIA 485
Query: 341 SRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPA 400
S RN+I+DQTNV+ SA++RK+R F F + AVV+ P+ EDLK R K+ E GK+VP
Sbjct: 486 SHKKRNYILDQTNVYGSAQRRKMRPFEGFHRKAVVICPRDEDLKERRCKQ-AEDGKDVPD 544
Query: 401 DAVNNMLANYVLP 413
AV M AN+VLP
Sbjct: 545 QAVLEMKANFVLP 557
>gi|327276387|ref|XP_003222951.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Anolis carolinensis]
Length = 798
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 214/376 (56%), Gaps = 24/376 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V ++ +CDL F + + L EGFA+ WSGARA G+ G+ C+ KI + +
Sbjct: 160 VAIDTYNCDLHFKVARDRYSGYPLTIEGFAFLWSGARATYGVRRGRICYEMKI--NEEIS 217
Query: 104 MEDTPPDQQ--HVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
++ PP + HV R+G S D +LGE S+G+GGTGK S F N+GE F D
Sbjct: 218 VKHLPPTEPDPHVVRIGWSL-DSCSTQLGEELFSYGYGGTGKKSTNCKFENYGECFSEND 276
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I C +D E + F KNGKWLG A + K+ A+FPH+L+
Sbjct: 277 IITCLVDFECGDDIEMSFMKNGKWLGVAYRL-------------RKDILGSQALFPHVLV 323
Query: 222 KNVVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSV---LGPTFCNMKDCEVMMMVGLPAS 277
KN + F E PV +++ L V +GP N +CE++MMVGLPA+
Sbjct: 324 KNCAIEFNFGQREDSFFPVPPGFTFIQHLPLSERVRGTIGPK--NKTECEILMMVGLPAA 381
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLL 337
GKTTWA K +P K+Y +LGTN I+++MKV GL R+ NY+ R+ L+ +A + L+
Sbjct: 382 GKTTWAIKHAAANPAKKYNILGTNAIMDKMKVMGLRRQRNYAGRWDVLIQQATQCLNRLI 441
Query: 338 SRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKE 397
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+
Sbjct: 442 QIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKD 501
Query: 398 VPADAVNNMLANYVLP 413
VP AV M AN+ LP
Sbjct: 502 VPDHAVLEMKANFALP 517
>gi|344298227|ref|XP_003420795.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein U-like protein 1-like [Loxodonta
africana]
Length = 844
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 213/374 (56%), Gaps = 20/374 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 199 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 258
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 259 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 316
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 317 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 363
Query: 223 NVVVVMQFS--VEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGK 279
N V F E + G+ +++ L G + G K DCE++MMVGLPA+GK
Sbjct: 364 NCAVEFNFGQRAEPYCSVLPGF-TFIQHLPLGERIRGTVGPKSKADCEILMMVGLPAAGK 422
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 423 TTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQI 482
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+VP
Sbjct: 483 AARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVP 542
Query: 400 ADAVNNMLANYVLP 413
AV M AN+ LP
Sbjct: 543 DHAVLEMKANFTLP 556
>gi|431911576|gb|ELK13733.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1 [Pteropus
alecto]
Length = 858
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 213/374 (56%), Gaps = 20/374 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFS--VEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGK 279
N V F E + G+ +++ L G + G K +CE++MMVGLPA+GK
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGF-TFIQHLPLGERIRGTVGPKTKAECEILMMVGLPAAGK 435
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 436 TTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQI 495
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+VP
Sbjct: 496 AARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVP 555
Query: 400 ADAVNNMLANYVLP 413
AV M AN+ LP
Sbjct: 556 DHAVLEMKANFTLP 569
>gi|334328695|ref|XP_001372053.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
[Monodelphis domestica]
Length = 887
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 230 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 289
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+ F D
Sbjct: 290 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEAFSYGYGGTGKKSTNSRFENYGDTFAENDV 347
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKWLG A + + G A++PH+L+K
Sbjct: 348 IGCFADFECGHEIELSFTKNGKWLGIAYRIQKDALG-------------GQALYPHVLVK 394
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F + +IP + V + +GP + DCE++MMVGLPA+G
Sbjct: 395 NCAVEFNFGQRREPYCSVIPGFTFIQHVPVGERIRGTIGPK--SKADCEILMMVGLPAAG 452
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 453 KTTWAVKHAAANPTKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 512
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R+++R E GK+V
Sbjct: 513 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIRRTDEEGKDV 572
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 573 PDHAVLEMKANFTLP 587
>gi|444518495|gb|ELV12197.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1 [Tupaia
chinensis]
Length = 801
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 212/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 156 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 215
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 216 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 273
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C+ D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 274 IGCSADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 320
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 321 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 378
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 379 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 438
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 439 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 498
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 499 PDHAVLEMKANFTLP 513
>gi|432090775|gb|ELK24102.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1 [Myotis
davidii]
Length = 789
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 144 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 203
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 204 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 261
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C +D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 262 IGCFVDFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 308
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP +CE++MMVGLPA+G
Sbjct: 309 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--TKAECEILMMVGLPAAG 366
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 367 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 426
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 427 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 486
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 487 PDHAVLEMKANFTLP 501
>gi|355694944|gb|AER99840.1| heteroproteinous nuclear ribonucleoprotein U-like 1 [Mustela
putorius furo]
Length = 756
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 112 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 171
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 172 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 229
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 230 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 276
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 277 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERTRGTVGPK--SKAECEILMMVGLPAAG 334
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 335 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 394
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 395 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 454
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 455 PDHAVLEMKANFTLP 469
>gi|395859623|ref|XP_003802133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 3 [Otolemur garnettii]
gi|395859625|ref|XP_003802134.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 4 [Otolemur garnettii]
gi|395859627|ref|XP_003802135.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 5 [Otolemur garnettii]
Length = 756
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 212/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 112 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 171
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV RVG S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 172 HLPSTEPDP-HVVRVGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFDNYGDKFAENDV 229
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F + LG A++PH+L+K
Sbjct: 230 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKDALG-----------GQALYPHVLVK 276
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 277 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 334
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 335 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 394
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 395 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 454
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 455 PDHAVLEMKANFTLP 469
>gi|395859619|ref|XP_003802131.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 1 [Otolemur garnettii]
Length = 856
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 212/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV RVG S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRVGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFDNYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F + LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKDALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 494
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 495 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 554
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 555 PDHAVLEMKANFTLP 569
>gi|157824105|ref|NP_001101947.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 [Rattus
norvegicus]
gi|149056565|gb|EDM07996.1| heterogeneous nuclear ribonucleoprotein U-like 1 (predicted)
[Rattus norvegicus]
Length = 859
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSILPGFTFIQHLPLSERIRGTIGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 494
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 495 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 554
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 555 PDHAVLEMKANFTLP 569
>gi|395859621|ref|XP_003802132.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 2 [Otolemur garnettii]
Length = 804
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 212/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV RVG S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRVGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFDNYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F + LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKDALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 494
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 495 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 554
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 555 PDHAVLEMKANFTLP 569
>gi|74212736|dbj|BAE33342.1| unnamed protein product [Mus musculus]
Length = 859
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTIGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 494
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R+VKR E GK+V
Sbjct: 495 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTVKRTDEEGKDV 554
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 555 PDHAVLEMKANFTLP 569
>gi|21450323|ref|NP_659171.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform 1
[Mus musculus]
gi|81879327|sp|Q8VDM6.1|HNRL1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein U-like
protein 1
gi|18204832|gb|AAH21506.1| Heterogeneous nuclear ribonucleoprotein U-like 1 [Mus musculus]
gi|148692290|gb|EDL24237.1| heterogeneous nuclear ribonucleoprotein U-like 1 [Mus musculus]
Length = 859
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTIGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 494
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R+VKR E GK+V
Sbjct: 495 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTVKRTDEEGKDV 554
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 555 PDHAVLEMKANFTLP 569
>gi|50927444|gb|AAH78642.1| Hnrpul1 protein [Mus musculus]
Length = 759
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 112 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 171
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 172 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 229
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 230 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 276
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 277 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTIGPK--SKAECEILMMVGLPAAG 334
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 335 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 394
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R+VKR E GK+V
Sbjct: 395 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTVKRTDEEGKDV 454
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 455 PDHAVLEMKANFTLP 469
>gi|20379977|gb|AAH27844.1| Hnrpul1 protein [Mus musculus]
Length = 651
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 4 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 63
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 64 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 121
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 122 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 168
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 169 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTIGPK--SKAECEILMMVGLPAAG 226
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 227 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 286
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R+VKR E GK+V
Sbjct: 287 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTVKRTDEEGKDV 346
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 347 PDHAVLEMKANFTLP 361
>gi|149722156|ref|XP_001500242.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 isoform
3 [Equus caballus]
Length = 805
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 494
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 495 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 554
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 555 PDHAVLEMKANFTLP 569
>gi|73947516|ref|XP_866605.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 isoform
13 [Canis lupus familiaris]
Length = 804
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|390479033|ref|XP_003735635.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
[Callithrix jacchus]
Length = 802
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|20379474|gb|AAH27713.1| Heterogeneous nuclear ribonucleoprotein U-like 1 [Homo sapiens]
gi|119577433|gb|EAW57029.1| heterogeneous nuclear ribonucleoprotein U-like 1, isoform CRA_d
[Homo sapiens]
Length = 804
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|301776627|ref|XP_002923730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Ailuropoda melanoleuca]
Length = 856
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|281340720|gb|EFB16304.1| hypothetical protein PANDA_012928 [Ailuropoda melanoleuca]
Length = 857
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 494
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 495 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 554
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 555 PDHAVLEMKANFTLP 569
>gi|397482589|ref|XP_003812503.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 1 [Pan paniscus]
gi|397482591|ref|XP_003812504.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 2 [Pan paniscus]
Length = 756
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 111 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 170
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 171 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 228
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 229 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 275
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 276 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 333
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 334 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 393
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 394 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 453
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 454 PDHAVLEMKANFTLP 468
>gi|12803479|gb|AAH02564.1| Heterogeneous nuclear ribonucleoprotein U-like 1 [Homo sapiens]
gi|190689437|gb|ACE86493.1| heterogeneous nuclear ribonucleoprotein U-like 1 protein [synthetic
construct]
gi|190690799|gb|ACE87174.1| heterogeneous nuclear ribonucleoprotein U-like 1 protein [synthetic
construct]
Length = 856
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|134085878|ref|NP_001076935.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 [Bos
taurus]
gi|133777460|gb|AAI14692.1| HNRNPUL1 protein [Bos taurus]
gi|296477834|tpg|DAA19949.1| TPA: heterogeneous nuclear ribonucleoprotein U-like 1 [Bos taurus]
Length = 858
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 494
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 495 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 554
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 555 PDHAVLEMKANFTLP 569
>gi|221041654|dbj|BAH12504.1| unnamed protein product [Homo sapiens]
Length = 767
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 122 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 181
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 182 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 239
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 240 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 286
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 287 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 344
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 345 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 404
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 405 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 464
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 465 PDHAVLEMKANFTLP 479
>gi|338710468|ref|XP_003362364.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 [Equus
caballus]
Length = 857
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 494
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 495 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 554
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 555 PDHAVLEMKANFTLP 569
>gi|158254894|dbj|BAF83418.1| unnamed protein product [Homo sapiens]
Length = 756
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 111 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 170
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 171 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 228
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 229 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 275
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 276 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 333
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 334 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 393
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 394 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 453
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 454 PDHAVLEMKANFTLP 468
>gi|350537033|ref|NP_001233455.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 [Pan
troglodytes]
gi|343960761|dbj|BAK61970.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 [Pan
troglodytes]
gi|410222290|gb|JAA08364.1| heterogeneous nuclear ribonucleoprotein U-like 1 [Pan troglodytes]
gi|410259156|gb|JAA17544.1| heterogeneous nuclear ribonucleoprotein U-like 1 [Pan troglodytes]
Length = 856
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|21536320|ref|NP_653333.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform d
[Homo sapiens]
gi|33874682|gb|AAH14232.1| HNRPUL1 protein [Homo sapiens]
gi|33987969|gb|AAH09988.2| HNRPUL1 protein [Homo sapiens]
gi|119577428|gb|EAW57024.1| heterogeneous nuclear ribonucleoprotein U-like 1, isoform CRA_a
[Homo sapiens]
gi|119577430|gb|EAW57026.1| heterogeneous nuclear ribonucleoprotein U-like 1, isoform CRA_a
[Homo sapiens]
gi|119577431|gb|EAW57027.1| heterogeneous nuclear ribonucleoprotein U-like 1, isoform CRA_a
[Homo sapiens]
gi|190689367|gb|ACE86458.1| heterogeneous nuclear ribonucleoprotein U-like 1 protein [synthetic
construct]
gi|190690729|gb|ACE87139.1| heterogeneous nuclear ribonucleoprotein U-like 1 protein [synthetic
construct]
Length = 756
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 111 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 170
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 171 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 228
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 229 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 275
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 276 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 333
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 334 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 393
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 394 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 453
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 454 PDHAVLEMKANFTLP 468
>gi|402905647|ref|XP_003915626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 3 [Papio anubis]
gi|402905649|ref|XP_003915627.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 4 [Papio anubis]
gi|402905651|ref|XP_003915628.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 5 [Papio anubis]
Length = 756
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 111 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 170
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 171 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 228
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 229 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 275
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 276 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 333
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 334 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 393
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 394 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 453
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 454 PDHAVLEMKANFTLP 468
>gi|417404949|gb|JAA49205.1| Putative scaffold/matrix specific factor hnrnp-u/saf-a [Desmodus
rotundus]
Length = 847
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/374 (40%), Positives = 212/374 (56%), Gaps = 20/374 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 202 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 261
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 262 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 319
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 320 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 366
Query: 223 NVVVVMQFS--VEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGK 279
N V F E + G+ +++ L + G K +CE++MMVGLPA+GK
Sbjct: 367 NCAVEFNFGQRAEPYCSVLPGF-TFIQHLPLSERIRGTVGPKTKAECEILMMVGLPAAGK 425
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 426 TTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQI 485
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+VP
Sbjct: 486 AARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVP 545
Query: 400 ADAVNNMLANYVLP 413
AV M AN+ LP
Sbjct: 546 DHAVLEMKANFTLP 559
>gi|296233871|ref|XP_002762199.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 1 [Callithrix jacchus]
Length = 854
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|73947492|ref|XP_852865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 isoform
2 [Canis lupus familiaris]
Length = 856
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|402905645|ref|XP_003915625.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 2 [Papio anubis]
Length = 804
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|21536326|ref|NP_008971.2| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform a
[Homo sapiens]
gi|90101344|sp|Q9BUJ2.2|HNRL1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein U-like
protein 1; AltName: Full=Adenovirus early region
1B-associated protein 5; AltName: Full=E1B-55
kDa-associated protein 5; Short=E1B-AP5
gi|119577429|gb|EAW57025.1| heterogeneous nuclear ribonucleoprotein U-like 1, isoform CRA_b
[Homo sapiens]
gi|168275768|dbj|BAG10604.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 [synthetic
construct]
gi|193785694|dbj|BAG51129.1| unnamed protein product [Homo sapiens]
Length = 856
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|403305352|ref|XP_003943231.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
[Saimiri boliviensis boliviensis]
Length = 855
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|355703572|gb|EHH30063.1| hypothetical protein EGK_10647 [Macaca mulatta]
Length = 766
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 121 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 180
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 181 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 238
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 239 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 285
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 286 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 343
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 344 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 403
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 404 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 463
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 464 PDHAVLEMKANFTLP 478
>gi|410356076|gb|JAA44522.1| heterogeneous nuclear ribonucleoprotein U-like 1 [Pan troglodytes]
Length = 866
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|410982986|ref|XP_003997825.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 1 [Felis catus]
gi|410982988|ref|XP_003997826.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 2 [Felis catus]
gi|410982990|ref|XP_003997827.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 3 [Felis catus]
Length = 756
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 111 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 170
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 171 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 228
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 229 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 275
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 276 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 333
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 334 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 393
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 394 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 453
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 454 PDHAVLEMKANFTLP 468
>gi|402905643|ref|XP_003915624.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 1 [Papio anubis]
gi|380783649|gb|AFE63700.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform a
[Macaca mulatta]
gi|383409169|gb|AFH27798.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform a
[Macaca mulatta]
gi|384945032|gb|AFI36121.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform a
[Macaca mulatta]
Length = 856
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|410356074|gb|JAA44521.1| heterogeneous nuclear ribonucleoprotein U-like 1 [Pan troglodytes]
Length = 856
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|296233881|ref|XP_002762203.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 5 [Callithrix jacchus]
gi|296233883|ref|XP_002762204.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 6 [Callithrix jacchus]
gi|390479035|ref|XP_003735636.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
[Callithrix jacchus]
Length = 754
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 111 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 170
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 171 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 228
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 229 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 275
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 276 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 333
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 334 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 393
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 394 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 453
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 454 PDHAVLEMKANFTLP 468
>gi|73947510|ref|XP_533659.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 isoform
1 [Canis lupus familiaris]
gi|73947512|ref|XP_866586.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 isoform
11 [Canis lupus familiaris]
gi|345785018|ref|XP_003432631.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 [Canis
lupus familiaris]
Length = 756
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 111 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 170
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 171 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 228
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 229 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 275
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 276 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 333
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 334 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 393
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 394 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 453
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 454 PDHAVLEMKANFTLP 468
>gi|3319956|emb|CAA07548.1| E1B-55kDa-associated protein [Homo sapiens]
Length = 856
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|332242427|ref|XP_003270388.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 2 [Nomascus leucogenys]
Length = 804
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 210/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADYRCXXXXXLSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|149722158|ref|XP_001500221.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 isoform
2 [Equus caballus]
gi|338710471|ref|XP_001500215.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 isoform
1 [Equus caballus]
gi|338710473|ref|XP_003362365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1 [Equus
caballus]
Length = 757
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 112 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 171
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 172 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 229
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 230 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 276
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 277 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 334
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 335 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 394
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 395 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 454
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 455 PDHAVLEMKANFTLP 469
>gi|332242425|ref|XP_003270387.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
isoform 1 [Nomascus leucogenys]
Length = 856
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 210/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADYRCXXXXXLSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|301620126|ref|XP_002939432.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Xenopus (Silurana) tropicalis]
Length = 809
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/379 (41%), Positives = 209/379 (55%), Gaps = 22/379 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
VVL+ + DL F ++ + L EGFAY WSGARA G+N G+ CF K+ V
Sbjct: 148 VVLDNYNSDLHFKLDKDRTVGYPLTIEGFAYLWSGARATHGVNRGRVCFEMKVTEKISVG 207
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ PD HV RVG S D +LGE S+G+GGTGK S F N+GE F D
Sbjct: 208 HLPSNEPDP-HVVRVGWSL-DSCSTQLGEEPFSYGYGGTGKKSSNSRFENYGETFAEHDV 265
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C ID ES + F+KNG+ LG A + KE A+FPHIL+K
Sbjct: 266 IGCYIDFESHGDIEMSFSKNGQPLGVAFRVH-------------KETLGSQALFPHILVK 312
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F IP + V + P N +CE++MMVGLP +G
Sbjct: 313 NCTVEFNFGQRPEPFCSAIPGFTFIQHVQPYERVRGTEPPK--NKAECEILMMVGLPGAG 370
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K HPEK+Y++LGTN I+E+M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 371 KTTWAVKHAAAHPEKKYVILGTNAIMEKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 430
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ +A+KRK+R F F++ A+++ P DL+ R VKR E GK+V
Sbjct: 431 IAARRKRNYILDQTNVYGTAQKRKMRPFEGFQRKAIIICPTDADLQDRIVKRTDEEGKDV 490
Query: 399 PADAVNNMLANYVLPVNKD 417
P AV M AN+ LP D
Sbjct: 491 PDSAVLEMKANFALPEPGD 509
>gi|405959264|gb|EKC25317.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1
[Crassostrea gigas]
Length = 754
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 224/398 (56%), Gaps = 29/398 (7%)
Query: 21 KKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGAR 80
KK +++D +SS V+L+ + DL + +N L +S + GFA W+G R
Sbjct: 234 KKIEMEDDAWESSTD--------VLLDRFNADLSLKVNENNLSASPFTEGGFAMMWTGVR 285
Query: 81 ANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQH--VCRVGTSRGDDPVGKLGETEQSFGF 138
A G+ GGK + K+ T+ D+ PP++ H V RVG S + +LGE +SFG+
Sbjct: 286 ATYGVKGGKVAYEVKL--TENCDVSHLPPEEVHPNVLRVGWSANSTSM-QLGEEAKSFGY 342
Query: 139 GGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLAT-IGFAKNGKWLGTAKQFDAGSN 197
GGTGK + F ++G++F GD I +D + P I FAKNG +
Sbjct: 343 GGTGKAATECKFEDYGQQFTAGDVITAYLDFDQDPADIFISFAKNG-------------D 389
Query: 198 GLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVL 256
LGV K E A+FPH+L KNV F ++E+ P++ +++ + V
Sbjct: 390 DLGVCFPVKKSDLEEVALFPHVLTKNVAFECNFGALEEPWFPLKEEFTFIGKVPLEERVR 449
Query: 257 GPTF-CNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRK 315
G +DCEV+MM+GLPASGKTTWAEK PEK Y +LGTNLI+++MKV GL RK
Sbjct: 450 GTEPPAKKEDCEVIMMIGLPASGKTTWAEKLKASQPEKMYNILGTNLIIDKMKVMGLPRK 509
Query: 316 HNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVV 375
NY+ R+ L+ ++ + LL A+ RN+IIDQTNV+ SAR+RK++ F F++ AVV
Sbjct: 510 KNYAGRWDVLIDKSTKCLNKLLEIAAGKKRNYIIDQTNVYASARRRKMQPFEGFQRKAVV 569
Query: 376 VFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ P ED K R + KE GK+VP A+ M AN+ LP
Sbjct: 570 IVPTEEDYKTRLELQGKEEGKDVPEHAILEMKANFSLP 607
>gi|158256066|dbj|BAF84004.1| unnamed protein product [Homo sapiens]
Length = 856
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N + F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCALEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|156366089|ref|XP_001626973.1| predicted protein [Nematostella vectensis]
gi|156213868|gb|EDO34873.1| predicted protein [Nematostella vectensis]
Length = 394
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 216/377 (57%), Gaps = 30/377 (7%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V+L+ + DL F IE +G+ GF Y W+GARA+ G+ GK F ++ PVD
Sbjct: 1 VLLDDHNSDLHFVIEQDGVTGGNHSAPGFDYMWAGARASHGVKSGKIFFEVTVLDKLPVD 60
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ +T HV RVG S D ++GE S+G+GGT K S F ++GE++ D I
Sbjct: 61 LPETE-TTPHVVRVGWSV-DSANLQVGEDALSYGYGGTAKCSVSNKFFDYGERYSSNDII 118
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C IDL++ P I FAKNG +LG A F G A +PH+ +KN
Sbjct: 119 TCYIDLDASP-KCIFFAKNGLYLGVA--FRLGPEAYN------------KAFYPHVTVKN 163
Query: 224 VVVVMQFS-VEQGLIPVEGYKSWVSALDDGNSVL------GPTFCNMKDCEVMMMVGLPA 276
+ V + F P++G++ ++D L GP + +DC+V+MMVGLP
Sbjct: 164 MRVRVNFGGFAPYFPPIQGFR----MIEDAEQPLLIPGTRGP--ASQRDCQVIMMVGLPG 217
Query: 277 SGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVL 336
+GKT WAEK+VKDHPEK++ +LGTN I+++MKV L R+HNY R+ L+ +A+ I + +
Sbjct: 218 AGKTYWAEKYVKDHPEKKFNILGTNAIMDKMKVMNLARRHNYHGRWDALIKQASDILNKV 277
Query: 337 LSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGK 396
L A R RN+I+DQTNV+ +AR+RK+ F F +IA V+ E LK R+ +R GK
Sbjct: 278 LKIAERKNRNYILDQTNVYPNARRRKMNNFRGFHRIAAVLVTTNEVLKERTERRENLEGK 337
Query: 397 EVPADAVNNMLANYVLP 413
+VP +AV M AN+ LP
Sbjct: 338 KVPVEAVMEMKANFTLP 354
>gi|158256956|dbj|BAF84451.1| unnamed protein product [Homo sapiens]
Length = 856
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 210/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ C KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCSEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 375
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 376 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 433
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 434 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 493
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 494 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 553
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 554 PDHAVLEMKANFTLP 568
>gi|395526103|ref|XP_003765210.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
[Sarcophilus harrisii]
Length = 898
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/375 (39%), Positives = 210/375 (56%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGA+A+ G+ G+ CF KI V
Sbjct: 82 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGAKASYGVRRGRVCFEMKINEEISVK 141
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+ F D
Sbjct: 142 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEAFSYGYGGTGKKSTNSRFENYGDTFAENDV 199
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKWLG A + + G A++PH+L+K
Sbjct: 200 IGCFADFECGHEIELSFTKNGKWLGIAYRIQKDALG-------------GQALYPHVLVK 246
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F + +IP + V + +GP + DCE++MMVGLPA+G
Sbjct: 247 NCAVEFNFGQRREPYCSIIPGFTFIQHVPVGERIRGTIGPK--SKADCEILMMVGLPAAG 304
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+ GL R+ NY+ R+ L+ +A + L+
Sbjct: 305 KTTWAVKHAAANPTKKYNILGTNAIMDKMRGMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 364
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R+++R E GK+V
Sbjct: 365 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIRRTDEEGKDV 424
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 425 PDHAVLEMKANFTLP 439
>gi|426243836|ref|XP_004023657.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein U-like protein 1 [Ovis aries]
Length = 858
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 211/377 (55%), Gaps = 24/377 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMK--VPGLLRKHNYSERFQCLMGRANAIFDVL 336
KTTWA K +P K+Y +LGTN I+++M+ V GL R+ NY+ R+ L+ +A + L
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRMRVMGLRRQXNYAGRWDVLIQQATQCLNRL 494
Query: 337 LSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGK 396
+ A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK
Sbjct: 495 IQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGK 554
Query: 397 EVPADAVNNMLANYVLP 413
+VP AV M AN+ LP
Sbjct: 555 DVPDHAVLEMKANFTLP 571
>gi|355755859|gb|EHH59606.1| hypothetical protein EGM_09760 [Macaca fascicularis]
Length = 855
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 210/375 (56%), Gaps = 23/375 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 270
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 271 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 328
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 329 IGC-FAFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 374
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 375 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAG 432
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 433 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 492
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 493 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 552
Query: 399 PADAVNNMLANYVLP 413
P AV M AN+ LP
Sbjct: 553 PDHAVLEMKANFTLP 567
>gi|344238843|gb|EGV94946.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1 [Cricetulus
griseus]
Length = 1566
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 211/383 (55%), Gaps = 22/383 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 1147 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 1206
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 1207 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPVSYGYGGTGKKSTNSRFENYGDKFAENDV 1264
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 1265 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 1311
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 1312 NCAVEFNFGQRAEPYCSILPGFTFIQHLPLSERIRGTIGPK--SKAECEILMMVGLPAAG 1369
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 1370 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 1429
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 1430 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 1489
Query: 399 PADAVNNMLANYVLPVNKDTPGS 421
P AV M N + PGS
Sbjct: 1490 PDYAVLEMKGASSYNKNSNIPGS 1512
>gi|260818749|ref|XP_002604545.1| hypothetical protein BRAFLDRAFT_79407 [Branchiostoma floridae]
gi|229289872|gb|EEN60556.1| hypothetical protein BRAFLDRAFT_79407 [Branchiostoma floridae]
Length = 947
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 221/387 (57%), Gaps = 31/387 (8%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
VVL+ + DL F I +GLK L+ EGFA+ W+GARA G+ GK CF KI T+ +D
Sbjct: 375 VVLDKYNSDLHFKISRDGLKGYPLNVEGFAFLWAGARATWGVKAGKVCFEVKI--TEDLD 432
Query: 104 MEDTPPDQQH--VCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
++ P D+ V RVG S + +LGE S+G+GGT K S F ++GE+FG GD
Sbjct: 433 VKHLPTDEPDPVVSRVGWSIDFSSI-QLGEEPFSYGYGGTAKSSTACKFNDYGERFGAGD 491
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
+ C +D S+ TI F KNG+ G A V++ +++R A+FPH+L
Sbjct: 492 VMGCYVDFTSE-QPTISFTKNGEDQGDAF----------VIEEDMEDR----ALFPHVLC 536
Query: 222 KNVVVVMQF-SVEQGLIPV-EGYK--SWVSALDDGNSVLGP-------TFCNMKDCEVMM 270
KN V F +E+ P+ EG++ V+ + GP T E+++
Sbjct: 537 KNQSVEFNFGQLEEPWFPLKEGFELIEKVAVEERVRGTKGPETKKDAETAGESTGPEMLL 596
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WAE +K +PEK+Y +LGTN I+++MKV GL RK NY+ R+ L+ A
Sbjct: 597 MVGLPGSGKTYWAESHMKGNPEKKYNILGTNFIMDKMKVMGLPRKRNYAGRWDVLIQTAT 656
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
+ ++ A R RNFI+DQTNV+ SAR+RK+ F F++ A+VV P E+ K R KR
Sbjct: 657 KCLNRIIEIACRKKRNFILDQTNVYASARRRKMTPFEGFQRKAIVVVPTDEEFKKRCEKR 716
Query: 391 FKEMGKEVPADAVNNMLANYVLPVNKD 417
GKEVP +AV M AN+ LP D
Sbjct: 717 TSVEGKEVPDEAVLEMKANFTLPHTGD 743
>gi|395751232|ref|XP_003780746.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein U-like protein 1 [Pongo abelii]
Length = 940
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 209/376 (55%), Gaps = 23/376 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 315 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 374
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLG-ETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+ T PD HV R+G S D +LG E S+G+GGTG S F N+G+ F D
Sbjct: 375 HLPSTEPDP-HVVRIGWSL-DSCSTQLGKEGAFSYGYGGTGXRSTNSRFENYGDXFAEND 432
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I C D E + F KNGKW+G A F LG A++PH+L+
Sbjct: 433 VIGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLV 479
Query: 222 KNVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPAS 277
KN V F ++P + + + +GP + +CE++MMVGLPA+
Sbjct: 480 KNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAA 537
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLL 337
GKTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 538 GKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLI 597
Query: 338 SRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKE 397
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+
Sbjct: 598 QIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKD 657
Query: 398 VPADAVNNMLANYVLP 413
VP AV M AN+ LP
Sbjct: 658 VPDHAVLEMKANFTLP 673
>gi|354499531|ref|XP_003511862.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Cricetulus griseus]
Length = 564
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 206/368 (55%), Gaps = 22/368 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 112 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 171
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 172 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPVSYGYGGTGKKSTNSRFENYGDKFAENDV 229
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 230 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLVK 276
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 277 NCAVEFNFGQRAEPYCSILPGFTFIQHLPLSERIRGTIGPK--SKAECEILMMVGLPAAG 334
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 335 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ 394
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+V
Sbjct: 395 IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDV 454
Query: 399 PADAVNNM 406
P AV M
Sbjct: 455 PDYAVLEM 462
>gi|221505732|gb|EEE31377.1| hypothetical protein TGVEG_083890 [Toxoplasma gondii VEG]
Length = 736
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/388 (40%), Positives = 220/388 (56%), Gaps = 38/388 (9%)
Query: 44 VVLNPADCDLDFDIE-DNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQP 101
V L+ AD LD +++ GL +S +H G Y W G R+ G+ G G+ F K+V
Sbjct: 68 VRLDAADAHLDLEVDASTGLSASCMHTNGCQYTWKGIRSTYGVRGSGQVYFETKVVHAPT 127
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKL--GETEQSFGFGGTGKFSHGGNFLNFGEKFGV 159
V M +TP ++VCRVG S P+ L GE+ S+G+GGT K S+ F N+GE +GV
Sbjct: 128 VVMPETPVHTRNVCRVGVSL---PLTSLFLGESSDSWGYGGTAKKSYSRKFENYGETYGV 184
Query: 160 GDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHI 219
GD I IDL+ L+ F KNGK+LG A +D + R +S +FPH
Sbjct: 185 GDVIGTIIDLDDLRLS---FTKNGKFLGVA--YD------------LPPRVRDSGLFPHF 227
Query: 220 LLKNVVVVMQFSVEQGLIPVEGYKSWVSALDD-------GNSVLGPTFCNMKDCEVMMMV 272
LKNV + + F+ P K + L D N V P + KDCE +MMV
Sbjct: 228 CLKNVDIQVNFNAASAWFPPPNSK--IQFLGDVPEKDLMANLVEHP--ASPKDCEFIMMV 283
Query: 273 GLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAI 332
G+PA GKT WAE+ + +P K ++LLGTN +++QM+V G+ R+ NY+ER++ LM A ++
Sbjct: 284 GVPACGKTFWAEQHCRANPRKSFVLLGTNAVIDQMRVMGVKRQSNYAERWEELMTTATSV 343
Query: 333 FDVLLSRASR--TPRNFIIDQTNVFKSARKRKLRLFVNFR-KIAVVVFPKPEDLKIRSVK 389
F+ L+ RAS PRN IIDQTNVFK+AR+RK++ F + + AV + L+ R+ K
Sbjct: 344 FNTLIERASSGAVPRNVIIDQTNVFKNARRRKVQPFREWGVRRAVTIVTDERTLQQRTAK 403
Query: 390 RFKEMGKEVPADAVNNMLANYVLPVNKD 417
R +E GK VP AV +M A + LP D
Sbjct: 404 REREEGKFVPVSAVMDMKAAFSLPAYDD 431
>gi|237838289|ref|XP_002368442.1| SPRY domain-containing protein [Toxoplasma gondii ME49]
gi|211966106|gb|EEB01302.1| SPRY domain-containing protein [Toxoplasma gondii ME49]
Length = 704
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 156/388 (40%), Positives = 219/388 (56%), Gaps = 38/388 (9%)
Query: 44 VVLNPADCDLDFDIE-DNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQP 101
V L+ AD LD +++ GL +S +H G Y W G R+ G+ G G+ F K+V
Sbjct: 60 VRLDAADAHLDLEVDASTGLSASCMHTNGCQYTWKGIRSTYGVRGSGQVYFETKVVHAPT 119
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKL--GETEQSFGFGGTGKFSHGGNFLNFGEKFGV 159
V M +TP ++VCRVG S P+ L GE+ S+G+GGT K S F N+GE +GV
Sbjct: 120 VVMPETPVHTRNVCRVGVSL---PLTSLFLGESSDSWGYGGTAKKSFSRKFENYGETYGV 176
Query: 160 GDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHI 219
GD I IDL+ L+ F KNGK+LG A +D + R +S +FPH
Sbjct: 177 GDVIGTIIDLDDLRLS---FTKNGKFLGVA--YD------------LPPRVRDSGLFPHF 219
Query: 220 LLKNVVVVMQFSVEQGLIPVEGYKSWVSALDD-------GNSVLGPTFCNMKDCEVMMMV 272
LKNV + + F+ P K + L D N V P + KDCE +MMV
Sbjct: 220 CLKNVDIQVNFNAASAWFPPPNSK--IQFLGDVPEKDLMANLVEHP--ASPKDCEFIMMV 275
Query: 273 GLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAI 332
G+PA GKT WAE+ + +P K ++LLGTN +++QM+V G+ R+ NY+ER++ LM A ++
Sbjct: 276 GVPACGKTFWAEQHCRANPRKSFVLLGTNAVIDQMRVMGVKRQSNYAERWEELMTTATSV 335
Query: 333 FDVLLSRASR--TPRNFIIDQTNVFKSARKRKLRLFVNFR-KIAVVVFPKPEDLKIRSVK 389
F+ L+ RAS PRN IIDQTNVFK+AR+RK++ F + + AV + L+ R+ K
Sbjct: 336 FNTLIERASSGAVPRNVIIDQTNVFKNARRRKVQPFREWGVRRAVTIVTDERTLQQRTAK 395
Query: 390 RFKEMGKEVPADAVNNMLANYVLPVNKD 417
R +E GK VP AV +M A + LP D
Sbjct: 396 REREEGKFVPVSAVMDMKAAFSLPAYDD 423
>gi|221484289|gb|EEE22585.1| SPRY domain-containing protein, putative [Toxoplasma gondii GT1]
Length = 717
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/388 (40%), Positives = 219/388 (56%), Gaps = 38/388 (9%)
Query: 44 VVLNPADCDLDFDIE-DNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQP 101
V L+ AD LD +++ GL +S +H G Y W G R+ G+ G G+ F K+V
Sbjct: 65 VRLDAADAHLDLEVDASTGLSASCMHTNGCQYTWKGIRSTYGVRGSGQVYFETKVVHAPT 124
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKL--GETEQSFGFGGTGKFSHGGNFLNFGEKFGV 159
V M +TP ++VCRVG S P+ L GE+ S+G+GGT K S F N+GE +GV
Sbjct: 125 VVMPETPVHTRNVCRVGVSL---PLTSLFLGESSDSWGYGGTAKKSFSRKFENYGETYGV 181
Query: 160 GDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHI 219
GD I IDL+ L+ F KNGK+LG A +D + R +S +FPH
Sbjct: 182 GDVIGTIIDLDDLRLS---FTKNGKFLGVA--YD------------LPPRVRDSGLFPHF 224
Query: 220 LLKNVVVVMQFSVEQGLIPVEGYKSWVSALDD-------GNSVLGPTFCNMKDCEVMMMV 272
LKNV + + F+ P K + L D N V P + KDCE +MMV
Sbjct: 225 CLKNVDIQVNFNAASAWFPPPNSK--IQFLGDVPEKDLMANLVEHP--ASPKDCEFIMMV 280
Query: 273 GLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAI 332
G+PA GKT WAE+ + +P K ++LLGTN +++QM+V G+ R+ NY+ER++ LM A ++
Sbjct: 281 GVPACGKTFWAEQHCRANPRKSFVLLGTNAVIDQMRVMGVKRQSNYAERWEELMTTATSV 340
Query: 333 FDVLLSRASR--TPRNFIIDQTNVFKSARKRKLRLFVNFR-KIAVVVFPKPEDLKIRSVK 389
F+ L+ RAS PRN IIDQTNVFK+AR+RK++ F + + AV + L+ R+ K
Sbjct: 341 FNTLIERASSGAVPRNVIIDQTNVFKNARRRKVQPFREWGVRRAVTIVTDERTLQQRTAK 400
Query: 390 RFKEMGKEVPADAVNNMLANYVLPVNKD 417
R +E GK VP AV +M A + LP D
Sbjct: 401 REREEGKFVPVSAVMDMKAAFSLPAYDD 428
>gi|401402300|ref|XP_003881215.1| putative SPRY domain-containing protein [Neospora caninum
Liverpool]
gi|325115627|emb|CBZ51182.1| putative SPRY domain-containing protein [Neospora caninum
Liverpool]
Length = 655
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 155/389 (39%), Positives = 215/389 (55%), Gaps = 40/389 (10%)
Query: 44 VVLNPADCDLDFDIED-NGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQP 101
V L+ AD LD ++ GL +S +H G Y W G R G+ G G++ F K+
Sbjct: 63 VRLDAADGHLDLQVDAATGLTASCMHTNGCQYTWKGIRTTYGVRGTGQFYFETKVTHAAE 122
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKL--GETEQSFGFGGTGKFSHGGNFLNFGEKFGV 159
V M +TP ++VCRVG S P+ L GE+ S+G+GGT K S F N+GE +GV
Sbjct: 123 VVMPETPAHTRNVCRVGVSL---PLTSLFLGESSDSWGYGGTAKKSFSRKFENYGEPYGV 179
Query: 160 GDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHI 219
GD I IDL++ L+ F KNGK+LG A A R +S +FPH
Sbjct: 180 GDVIGTIIDLDNLKLS---FTKNGKFLGAAYSLPA--------------RVRDSGLFPHF 222
Query: 220 LLKNVVVVMQFSVEQGLIPVEGYKSWVSALDD-------GNSVLGPTFCNMKDCEVMMMV 272
LKNV + + FS K + L D N V P + KDCE +MMV
Sbjct: 223 CLKNVDIEVNFSAASAWFAPPNSK--IQFLGDVPEKDLLANMVEHPQ--SPKDCEFIMMV 278
Query: 273 GLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAI 332
GLP GKT WAE+ + +P K +++LGTN +++QM+V G+ R+ NY+ER++ LM A ++
Sbjct: 279 GLPGCGKTFWAEQHSRANPRKSFVVLGTNAVIDQMRVMGVRRQSNYAERWEELMSTATSV 338
Query: 333 FDVLLSRASRT--PRNFIIDQTNVFKSARKRKLRLFVNF--RKIAVVVFPKPEDLKIRSV 388
F+ L+ RAS PRN IIDQTNVFK+AR+RK+ F + R+ +V +P L+ R+
Sbjct: 339 FNALIDRASSAGVPRNVIIDQTNVFKNARRRKVHFFREWGVRRAVTIVTDEP-TLQQRTA 397
Query: 389 KRFKEMGKEVPADAVNNMLANYVLPVNKD 417
KR +E GK VP AV +M A + LP D
Sbjct: 398 KREREEGKFVPVSAVMDMKAAFSLPAYDD 426
>gi|405971245|gb|EKC36091.1| Eukaryotic translation initiation factor 3 subunit D [Crassostrea
gigas]
Length = 1747
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 145/391 (37%), Positives = 220/391 (56%), Gaps = 23/391 (5%)
Query: 39 SQKQRVVLNPADCDLDFDIEDNGLKSSGLHQ-EGFAYCWSGARANVGINGGKYCFGCKIV 97
S+K V+L+ + DL ++D+G + L + F +CW+G +A G+ GK + ++
Sbjct: 754 SEKSIVMLDDYNSDLHLVLDDDGYGARPLSEPSAFCFCWAGVKATHGVYRGKAYYEIQVT 813
Query: 98 STQPVDM-EDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEK 156
Q D D H+ RVG S + + +LGE S+G+GGTG+FS F N+GEK
Sbjct: 814 EHQQTDFGTDHQEKDPHIIRVGWSLEECSL-QLGEEPYSYGYGGTGRFSQNCKFGNYGEK 872
Query: 157 FGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVF 216
FG GD I +D++++P TI + KNG+WLG A + G+ E A+F
Sbjct: 873 FGQGDVIGALLDMDTQP-PTISYMKNGQWLGIAHTLHGFTPGI-----------KEKALF 920
Query: 217 PHILLKNVVVVMQFSVEQGLIPV-EGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLP 275
PHIL KN M E P +GY + S+ P N +CE++M++GLP
Sbjct: 921 PHILTKNSRFRMNLGQEGTWYPPPQGYNYVQQVPEKIKSMDAPEKKN--ECEMIMIIGLP 978
Query: 276 ASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDV 335
+GKTT AE + +PEKRY ++GT+ ++++MKV GL RK+NY+ R++ L+ +A +
Sbjct: 979 GAGKTTLAENMKRSYPEKRYNIIGTDTLIDKMKVMGLPRKNNYNGRWEVLIDKATKALNK 1038
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
L A RN+I+DQTNV+ SARKRK++ F F + A+++ P+ +L R+ KR E G
Sbjct: 1039 LFEIAKNKNRNYILDQTNVYPSARKRKMKNFSGFFRRAMILQPEDSELTRRAEKRTAEDG 1098
Query: 396 KEVPADAVNNMLANYVLPVNKDTPGSDELFD 426
K VP AV M +N+ LP + +D LFD
Sbjct: 1099 KFVPESAVLEMKSNFKLPDD-----NDPLFD 1124
>gi|443702657|gb|ELU00578.1| hypothetical protein CAPTEDRAFT_221963 [Capitella teleta]
Length = 888
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/374 (40%), Positives = 212/374 (56%), Gaps = 21/374 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL+ + D+G K + EGFA+ WSG RAN GI GK F KIV VD
Sbjct: 276 VQLDRFNCDLNIRVNDDGFKCCPITVEGFAFMWSGVRANYGICKGKAAFEVKIVENLSVD 335
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+H+ RVG S D LGE E SFG+GG+GK S NF ++G+KF GD +
Sbjct: 336 HLPQEETSRHLVRVGFST-DANTMSLGEEELSFGYGGSGKSSTACNFEDYGQKFTEGDIV 394
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
+DL+S+ A I F+KNG+ LG D +E+ E+A+FPHIL KN
Sbjct: 395 TAYLDLDSEE-AEISFSKNGEDLGKCFTVD-------------REKLGEAALFPHILSKN 440
Query: 224 VVVVMQFSVEQGLIPVEGYKSWVSALDD---GNSVLGPTFCNMKD-CEVMMMVGLPASGK 279
+ F Q P + K +D + V G K+ CE++MM GLP GK
Sbjct: 441 CEFEVNFG--QKDAPWQPLKEGFVFFNDLAVEDRVRGTVPPKKKEECEILMMCGLPGCGK 498
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
+TWA K ++PEKRY +LGTN ++++MKV G+ RK NY R+ L+ ++ + LL
Sbjct: 499 STWATKHNLENPEKRYTVLGTNNLIDKMKVMGVPRKKNYGGRWDLLIDKSTKCLNRLLDI 558
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
AS+ RN+I+DQTNV+ A++RK+R F F++ A+V+ P E+ R +R KE GK+VP
Sbjct: 559 ASKKKRNYILDQTNVYPRAQRRKMRPFEGFQRKAIVIVPADEEFVRRCEEREKEEGKDVP 618
Query: 400 ADAVNNMLANYVLP 413
AV M AN+ LP
Sbjct: 619 DGAVLEMKANFELP 632
>gi|321461064|gb|EFX72099.1| hypothetical protein DAPPUDRAFT_216229 [Daphnia pulex]
Length = 658
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 211/381 (55%), Gaps = 22/381 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
V+L+ + DL+ I S L + GFAY W+GARA G GK C+ K+ V
Sbjct: 61 VLLDWYNSDLNLTINKTDFVSGAPLTEAGFAYMWAGARATYGFVNGKVCYEVKVTENLAV 120
Query: 103 D-MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+E++ P+ HV RVG S D +LGE S+G+GGT K S F ++G F + D
Sbjct: 121 SHLEESEPNH-HVVRVGWSV-DSTTYQLGEDPFSYGYGGTAKISQNCEFKDYGVPFQLND 178
Query: 162 TIICAIDL-ESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHIL 220
+ +D E K + F+ NG+ GV + +E A+FPHIL
Sbjct: 179 VVGVYLDASEEKESVELSFSVNGE-------------TQGVAFTLPREELNGRALFPHIL 225
Query: 221 LKNVVVVMQFSV--EQGLIPVEGYKSWVSALDDGNSVLGP-TFCNMKDCEVMMMVGLPAS 277
KN + F E P EGY+ W + N V G T DC+++MM GLP +
Sbjct: 226 TKNCRFEVNFGQKEEPWFPPTEGYE-WAGKIPVENRVRGAITPATRADCQMIMMCGLPGA 284
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLL 337
GKTTWA K+ ++P++++ +LGTN L++MKV GL R+ NY+ R++ L+ + ++LL
Sbjct: 285 GKTTWANKFSAENPDRKFNILGTNAFLDKMKVNGLPRRKNYTGRWEVLIEKCTRCLNILL 344
Query: 338 SRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKE 397
A++ RN+I+DQTNV+ +A+KRK+ F F++ AVV+ P ED K+R+ KR +E GK+
Sbjct: 345 EIAAKRRRNYILDQTNVYPTAQKRKMSYFSGFKRKAVVIVPTEEDAKVRAEKRIQEEGKD 404
Query: 398 VPADAVNNMLANYVLPVNKDT 418
VP AV M AN+ +P DT
Sbjct: 405 VPDSAVMEMKANFKIPSVDDT 425
>gi|198415758|ref|XP_002119786.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
U-like 1 [Ciona intestinalis]
Length = 1342
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 213/383 (55%), Gaps = 41/383 (10%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
+V+L+ DL+ ++ N S L +GF+Y W+GA+AN GI GK CF KI
Sbjct: 3 KVILDEYISDLNLEV--NEYNCSPLSYDGFSYMWAGAKANFGIRCGKVCFEVKISEY--C 58
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
D+ + HV RVG S D+ +LGE + SFGFG TGK S F N+G ++ GD
Sbjct: 59 DVTNKEFADTHVARVGWS-TDNATLQLGEDKNSFGFGSTGKKSLHRKFTNYGRRYEKGDV 117
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKER-QCESAVFPHILL 221
+ C + +E+ I ++ NG++ G A K R + A+FPHIL
Sbjct: 118 VGCYLSMENG-WVEISYSVNGRYCGVA----------------FKVRWMTDEALFPHILT 160
Query: 222 KNVVVVMQF--------SVEQGLIPV-EGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMV 272
KN + + F S++ G + + W+ V P + DCEV+MMV
Sbjct: 161 KNCRLDVNFGQSPHPYFSLQPGFKLIGHSPRDWLVG-----GVRAP--VSQSDCEVIMMV 213
Query: 273 GLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAI 332
GLP GK+TWA + K HP K+Y +LGT+ I+++M+V GL RK+N+ R+ L+ +A+
Sbjct: 214 GLPGVGKSTWALNYQKIHPSKKYFILGTDSIIDKMRVMGLPRKNNFGGRWDVLIKQASDC 273
Query: 333 FDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN--FRKIAVVVFPKPEDLKIRSVKR 390
F+ LL +AS PRN I+DQTNV+ SAR+RK++L+ + A+V+ P+ D+ RS +R
Sbjct: 274 FNALLKKASELPRNLILDQTNVYSSARRRKVKLYREKGYNINAMVLVPRDNDMVRRSKQR 333
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
E GKEVP AV +M AN+ LP
Sbjct: 334 TLEEGKEVPETAVLDMKANFSLP 356
>gi|242008287|ref|XP_002424938.1| E1b-55kD-associated protein, putative [Pediculus humanus corporis]
gi|212508552|gb|EEB12200.1| E1b-55kD-associated protein, putative [Pediculus humanus corporis]
Length = 1102
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 216/405 (53%), Gaps = 29/405 (7%)
Query: 15 KPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDI-EDNGLKSSGLHQEGFA 73
+P S +K K PV P ++ V+L D DL I ++N ++ L GF
Sbjct: 350 RPRSPSEKRKSSPPVRKPDDE-PEYDEKSVLL--IDSDLHMLISKENFFSATLLSDNGFG 406
Query: 74 YCWSGARANVGINGGKYCFGCKIVSTQPV---DMEDTPPDQQHVCRVGTSRGDDPVGKLG 130
+ W+G RA G GK + +I V + E P ++ RVG S + +LG
Sbjct: 407 FVWAGVRATYGFEKGKIYYEVRITKNIKVPYLENEMHP----NILRVGWSVQKTSL-QLG 461
Query: 131 ETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAK 190
E S+GFGGTGK S F N+G+ F V D + C ++++S P+ I + NG++ G A
Sbjct: 462 EEPLSYGFGGTGKISTNCQFQNYGKSFIVNDVVGCYLNMDSNPIE-ISYTLNGEYQGVAY 520
Query: 191 QFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVEGYKSWVSAL 249
D +E +FPHIL KN + F + E P+ G+ + + +
Sbjct: 521 NVD-------------REELKGQPLFPHILTKNCCFEVNFGNRESWAQPLPGFTN-IGEV 566
Query: 250 DDGNSVLGPTFCNMK-DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMK 308
+ + GP K DCEV+MM GLP SGKTTWA K+ ++H +K Y +LGTN ++++MK
Sbjct: 567 PLEDRIPGPKRPERKEDCEVIMMCGLPGSGKTTWAMKYAEEHKDKMYNILGTNALIDKMK 626
Query: 309 VPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN 368
V G+ RK NYS R++ L+ + + LL RN+IIDQTNV+ +A++RK+R F
Sbjct: 627 VMGVPRKRNYSGRWEVLIEKCTKCLNTLLEMGGYRRRNYIIDQTNVYPAAQRRKMRGFEG 686
Query: 369 FRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
F + AVV+ P E+LK R KR E GK+VP A+ M AN+ LP
Sbjct: 687 FVRRAVVIVPTDEELKSRIAKREAEEGKDVPDSAILEMKANFALP 731
>gi|226467768|emb|CAX69760.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1
[Schistosoma japonicum]
Length = 1369
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 211/380 (55%), Gaps = 24/380 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL+ I+ G ++ L + GF+ W+GA+AN G K F K+V V+
Sbjct: 166 VFLDTYNCDLNLLIDATGCQAKPLVEGGFSLMWAGAKANYGTISKKSFFEVKVVKNLQVE 225
Query: 104 MEDT-PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
D+ HV R+G S +D LGE QS+G+GGTGK S F+++G FG GD
Sbjct: 226 NYDSLVGGATHVLRIGWST-EDADFTLGEEPQSYGYGGTGKKSCNNKFVDYGCTFGEGDV 284
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ I+ S A + F+ NG G + V S + ER A+FPH+ +K
Sbjct: 285 VGAFIEWTST-EAVLRFSVNGVDQGECYR---------VQKSQLGERY---ALFPHVYVK 331
Query: 223 NVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNMK-DCEVMMMVG 273
NV F E IP + SW +++L V G K +CEV+MMVG
Sbjct: 332 NVEFACNFGQENQPAWFSPNIPSDDPLSWQQINSLPLSCRVRGRCPPQSKAECEVIMMVG 391
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP +GKT +AE+ +H EK+Y LLGTNLIL++MKV G+ R+ NY R+ L+ ++
Sbjct: 392 LPGAGKTYFAERLKAEHREKQYNLLGTNLILDKMKVMGIARQRNYHGRWDVLIDKSTKCL 451
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ L+S A RN+I+DQTNV+ SA++RK+R F F++ A+V+ P E+ + R +R KE
Sbjct: 452 NTLISMACMRRRNYILDQTNVYPSAQRRKMRPFEGFKRKAIVIVPTDEEFRRRIAQREKE 511
Query: 394 MGKEVPADAVNNMLANYVLP 413
GKEVP AV M AN+ LP
Sbjct: 512 EGKEVPETAVLEMKANFGLP 531
>gi|198416057|ref|XP_002119283.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
U-like 1, partial [Ciona intestinalis]
Length = 850
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 198/377 (52%), Gaps = 28/377 (7%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
VV++ CDL+ + L + L EGFAY W+G RA G+ GK C+ CK+ V
Sbjct: 189 VVIDKYHCDLNIKLHKGRLTAVPLTLEGFAYLWAGVRATYGVTTGKICYECKLAEEHSVR 248
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ H+ RVG S + P+ +GE+ S+G GTG+ FGEKF GD I
Sbjct: 249 HLPSSEAHPHLVRVGWSVPNTPM-NVGESRFSYGLCGTGRVVTNQTSKEFGEKFKGGDVI 307
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C +DL S + I + KNG LG A F + LG E+ +FPH+ KN
Sbjct: 308 GCYLDL-STDMMNIHYTKNGVLLGEA--FTEEKSRLG-----------ENPLFPHVSCKN 353
Query: 224 VVVVMQF-SVEQGLIP----VEGYK--SWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPA 276
+ F E+ P +E Y S V D GPT KDCEV+M+ GLP
Sbjct: 354 TTIEFNFGEKEEPYFPHPQELEDYVFISKVGLEDRVRGTTGPT--KRKDCEVLMLCGLPG 411
Query: 277 SGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVL 336
SGKT +A + + D PE + +LGT ++++MKV G+ +K+ LM A+ + +
Sbjct: 412 SGKTFYANQQLVDKPEMGFNILGTKSVVDRMKVTGIEQKYTTD----ILMSHASNCLNRM 467
Query: 337 LSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGK 396
A+R RN+I+DQTNVF SA++RKLR F F + A+V+ P E+ K R KR K+ GK
Sbjct: 468 FQMAARKNRNYILDQTNVFASAQRRKLRSFEGFHRRAIVIVPSEEEFKSRLDKRTKDEGK 527
Query: 397 EVPADAVNNMLANYVLP 413
E+P A+ M AN+ LP
Sbjct: 528 EIPDIAIFEMKANFSLP 544
>gi|256082628|ref|XP_002577556.1| E1b-55kD-associated protein [Schistosoma mansoni]
Length = 1149
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 206/380 (54%), Gaps = 24/380 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL+ + ++ L + GF+ W+G RAN G GK F ++V PV+
Sbjct: 167 VFLDTYNCDLNLMTDATSFQAKPLTEGGFSLMWAGVRANYGSISGKSFFEVRVVKNLPVE 226
Query: 104 MEDT-PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
D+ HV RVG S D LGE QSFG+GGTGK S F ++G FG GD
Sbjct: 227 NYDSLVGGATHVLRVGWSTEDTDF-TLGEEPQSFGYGGTGKKSTNNKFTDYGCTFGEGDV 285
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ I+ + A + F+ NG G V S + E SA+FPH+ +K
Sbjct: 286 VGAFIEW-TNVEALLRFSVNGVDQGEC---------FRVQKSQLGE---HSALFPHVYVK 332
Query: 223 NVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNMK-DCEVMMMVG 273
NV F E IP + SW ++ L V G K +CEV+MMVG
Sbjct: 333 NVEFACNFGQENQSPWFSPNIPSDDPLSWQQMNCLPLSCRVHGRCPPQSKSECEVIMMVG 392
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP +GKT +AE+ +H EK+Y +LGTNLIL++MKV G+ R+ NY R+ L+ +A
Sbjct: 393 LPGAGKTYFAEQQKTEHREKQYNILGTNLILDKMKVMGIARQRNYHGRWDVLIDKATKCL 452
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ L+S A RN+I+DQTNV+ SA++RK+R F F++ A+V+ P E+ + R +R KE
Sbjct: 453 NTLISMACMRRRNYILDQTNVYPSAQRRKMRPFEGFKRKAIVIVPTDEEFRRRIAQREKE 512
Query: 394 MGKEVPADAVNNMLANYVLP 413
GKEVP AV M AN+ +P
Sbjct: 513 EGKEVPETAVLEMKANFGIP 532
>gi|256082622|ref|XP_002577553.1| E1b-55kD-associated protein [Schistosoma mansoni]
Length = 1369
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 206/380 (54%), Gaps = 24/380 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL+ + ++ L + GF+ W+G RAN G GK F ++V PV+
Sbjct: 167 VFLDTYNCDLNLMTDATSFQAKPLTEGGFSLMWAGVRANYGSISGKSFFEVRVVKNLPVE 226
Query: 104 MEDT-PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
D+ HV RVG S D LGE QSFG+GGTGK S F ++G FG GD
Sbjct: 227 NYDSLVGGATHVLRVGWSTEDTDF-TLGEEPQSFGYGGTGKKSTNNKFTDYGCTFGEGDV 285
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ I+ + A + F+ NG G V S + E SA+FPH+ +K
Sbjct: 286 VGAFIEWTNV-EALLRFSVNGVDQGEC---------FRVQKSQLGE---HSALFPHVYVK 332
Query: 223 NVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNMK-DCEVMMMVG 273
NV F E IP + SW ++ L V G K +CEV+MMVG
Sbjct: 333 NVEFACNFGQENQSPWFSPNIPSDDPLSWQQMNCLPLSCRVHGRCPPQSKSECEVIMMVG 392
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP +GKT +AE+ +H EK+Y +LGTNLIL++MKV G+ R+ NY R+ L+ +A
Sbjct: 393 LPGAGKTYFAEQQKTEHREKQYNILGTNLILDKMKVMGIARQRNYHGRWDVLIDKATKCL 452
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ L+S A RN+I+DQTNV+ SA++RK+R F F++ A+V+ P E+ + R +R KE
Sbjct: 453 NTLISMACMRRRNYILDQTNVYPSAQRRKMRPFEGFKRKAIVIVPTDEEFRRRIAQREKE 512
Query: 394 MGKEVPADAVNNMLANYVLP 413
GKEVP AV M AN+ +P
Sbjct: 513 EGKEVPETAVLEMKANFGIP 532
>gi|360045306|emb|CCD82854.1| putative e1b-55kD-associated protein [Schistosoma mansoni]
Length = 1149
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 206/380 (54%), Gaps = 24/380 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL+ + ++ L + GF+ W+G RAN G GK F ++V PV+
Sbjct: 167 VFLDTYNCDLNLMTDATSFQAKPLTEGGFSLMWAGVRANYGSISGKSFFEVRVVKNLPVE 226
Query: 104 MEDT-PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
D+ HV RVG S D LGE QSFG+GGTGK S F ++G FG GD
Sbjct: 227 NYDSLVGGATHVLRVGWSTEDTDF-TLGEEPQSFGYGGTGKKSTNNKFTDYGCTFGEGDV 285
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ I+ + A + F+ NG G V S + E SA+FPH+ +K
Sbjct: 286 VGAFIEW-TNVEALLRFSVNGVDQGEC---------FRVQKSQLGE---HSALFPHVYVK 332
Query: 223 NVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNMK-DCEVMMMVG 273
NV F E IP + SW ++ L V G K +CEV+MMVG
Sbjct: 333 NVEFACNFGQENQSPWFSPNIPSDDPLSWQQMNCLPLSCRVHGRCPPQSKSECEVIMMVG 392
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP +GKT +AE+ +H EK+Y +LGTNLIL++MKV G+ R+ NY R+ L+ +A
Sbjct: 393 LPGAGKTYFAEQQKTEHREKQYNILGTNLILDKMKVMGIARQRNYHGRWDVLIDKATKCL 452
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ L+S A RN+I+DQTNV+ SA++RK+R F F++ A+V+ P E+ + R +R KE
Sbjct: 453 NTLISMACMRRRNYILDQTNVYPSAQRRKMRPFEGFKRKAIVIVPTDEEFRRRIAQREKE 512
Query: 394 MGKEVPADAVNNMLANYVLP 413
GKEVP AV M AN+ +P
Sbjct: 513 EGKEVPETAVLEMKANFGIP 532
>gi|360045305|emb|CCD82853.1| putative e1b-55kD-associated protein [Schistosoma mansoni]
Length = 1369
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 206/380 (54%), Gaps = 24/380 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL+ + ++ L + GF+ W+G RAN G GK F ++V PV+
Sbjct: 167 VFLDTYNCDLNLMTDATSFQAKPLTEGGFSLMWAGVRANYGSISGKSFFEVRVVKNLPVE 226
Query: 104 MEDT-PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
D+ HV RVG S D LGE QSFG+GGTGK S F ++G FG GD
Sbjct: 227 NYDSLVGGATHVLRVGWSTEDTDF-TLGEEPQSFGYGGTGKKSTNNKFTDYGCTFGEGDV 285
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ I+ + A + F+ NG G V S + E SA+FPH+ +K
Sbjct: 286 VGAFIEWTNV-EALLRFSVNGVDQGEC---------FRVQKSQLGE---HSALFPHVYVK 332
Query: 223 NVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNMK-DCEVMMMVG 273
NV F E IP + SW ++ L V G K +CEV+MMVG
Sbjct: 333 NVEFACNFGQENQSPWFSPNIPSDDPLSWQQMNCLPLSCRVHGRCPPQSKSECEVIMMVG 392
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP +GKT +AE+ +H EK+Y +LGTNLIL++MKV G+ R+ NY R+ L+ +A
Sbjct: 393 LPGAGKTYFAEQQKTEHREKQYNILGTNLILDKMKVMGIARQRNYHGRWDVLIDKATKCL 452
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ L+S A RN+I+DQTNV+ SA++RK+R F F++ A+V+ P E+ + R +R KE
Sbjct: 453 NTLISMACMRRRNYILDQTNVYPSAQRRKMRPFEGFKRKAIVIVPTDEEFRRRIAQREKE 512
Query: 394 MGKEVPADAVNNMLANYVLP 413
GKEVP AV M AN+ +P
Sbjct: 513 EGKEVPETAVLEMKANFGIP 532
>gi|156360687|ref|XP_001625157.1| predicted protein [Nematostella vectensis]
gi|156211976|gb|EDO33057.1| predicted protein [Nematostella vectensis]
Length = 368
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 197/367 (53%), Gaps = 25/367 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
VVL+ + DL I L + L EGF + G RA G GK CF CK+ T VD
Sbjct: 11 VVLDKYNSDLFLKIAPEALSLTILKDEGFPFMAGGVRATYGATSGKICFECKLTETAEVD 70
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ DT + +H RVG S D +LGE S+GF TGK F FG+ F GD I
Sbjct: 71 LPDTE-EPKHFVRVGWS-SDSANLQLGEVALSYGFDSTGKKCTNNEFTEFGQTFTAGDVI 128
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C +DLES P I F+KNG+ LG+A FD + G A+FPH+++KN
Sbjct: 129 TCYLDLESSP-KQISFSKNGEDLGSA--FDLPEDAQG------------KALFPHVMIKN 173
Query: 224 VVVVMQFSV--EQGLIPVEGYKSWVSALDDG--NSVLGPTFCNMKDCEVMMMVGLPASGK 279
+ + F E P EG++ +A D + GP + ++CEV+MM+GLPASGK
Sbjct: 174 IDCSLNFGTQEEAWFAPKEGFQFIQNAEKDTLEHGTRGPA--SKEECEVIMMIGLPASGK 231
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTW + +HP+K+Y +L T ++E+MK+ G RK + + LM +A L
Sbjct: 232 TTWVNNHLNEHPDKKYNILSTYSVMEKMKILGAPRKQDVG-GYSKLMDKAAKSLHRLFEI 290
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A RN+I+DQTNV+ +A+K+K+ F F + AVV P E+L R +R KE G E+P
Sbjct: 291 APAKKRNYILDQTNVYLAAQKKKMNPFEGFNRKAVVCIPTMEELNKRVEERKKE-GVELP 349
Query: 400 ADAVNNM 406
+A+ +M
Sbjct: 350 FNAICDM 356
>gi|256082624|ref|XP_002577554.1| E1b-55kD-associated protein [Schistosoma mansoni]
Length = 1216
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 206/380 (54%), Gaps = 24/380 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL+ + ++ L + GF+ W+G RAN G GK F ++V PV+
Sbjct: 14 VFLDTYNCDLNLMTDATSFQAKPLTEGGFSLMWAGVRANYGSISGKSFFEVRVVKNLPVE 73
Query: 104 MEDT-PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
D+ HV RVG S D LGE QSFG+GGTGK S F ++G FG GD
Sbjct: 74 NYDSLVGGATHVLRVGWSTEDTDF-TLGEEPQSFGYGGTGKKSTNNKFTDYGCTFGEGDV 132
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ I+ + A + F+ NG G V S + E SA+FPH+ +K
Sbjct: 133 VGAFIEWTNV-EALLRFSVNGVDQGEC---------FRVQKSQLGE---HSALFPHVYVK 179
Query: 223 NVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNMK-DCEVMMMVG 273
NV F E IP + SW ++ L V G K +CEV+MMVG
Sbjct: 180 NVEFACNFGQENQSPWFSPNIPSDDPLSWQQMNCLPLSCRVHGRCPPQSKSECEVIMMVG 239
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP +GKT +AE+ +H EK+Y +LGTNLIL++MKV G+ R+ NY R+ L+ +A
Sbjct: 240 LPGAGKTYFAEQQKTEHREKQYNILGTNLILDKMKVMGIARQRNYHGRWDVLIDKATKCL 299
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ L+S A RN+I+DQTNV+ SA++RK+R F F++ A+V+ P E+ + R +R KE
Sbjct: 300 NTLISMACMRRRNYILDQTNVYPSAQRRKMRPFEGFKRKAIVIVPTDEEFRRRIAQREKE 359
Query: 394 MGKEVPADAVNNMLANYVLP 413
GKEVP AV M AN+ +P
Sbjct: 360 EGKEVPETAVLEMKANFGIP 379
>gi|360045304|emb|CCD82852.1| putative e1b-55kD-associated protein [Schistosoma mansoni]
Length = 1216
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 206/380 (54%), Gaps = 24/380 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL+ + ++ L + GF+ W+G RAN G GK F ++V PV+
Sbjct: 14 VFLDTYNCDLNLMTDATSFQAKPLTEGGFSLMWAGVRANYGSISGKSFFEVRVVKNLPVE 73
Query: 104 MEDT-PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
D+ HV RVG S D LGE QSFG+GGTGK S F ++G FG GD
Sbjct: 74 NYDSLVGGATHVLRVGWSTEDTDF-TLGEEPQSFGYGGTGKKSTNNKFTDYGCTFGEGDV 132
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ I+ + A + F+ NG G V S + E SA+FPH+ +K
Sbjct: 133 VGAFIEWTNV-EALLRFSVNGVDQGEC---------FRVQKSQLGE---HSALFPHVYVK 179
Query: 223 NVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNMK-DCEVMMMVG 273
NV F E IP + SW ++ L V G K +CEV+MMVG
Sbjct: 180 NVEFACNFGQENQSPWFSPNIPSDDPLSWQQMNCLPLSCRVHGRCPPQSKSECEVIMMVG 239
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP +GKT +AE+ +H EK+Y +LGTNLIL++MKV G+ R+ NY R+ L+ +A
Sbjct: 240 LPGAGKTYFAEQQKTEHREKQYNILGTNLILDKMKVMGIARQRNYHGRWDVLIDKATKCL 299
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ L+S A RN+I+DQTNV+ SA++RK+R F F++ A+V+ P E+ + R +R KE
Sbjct: 300 NTLISMACMRRRNYILDQTNVYPSAQRRKMRPFEGFKRKAIVIVPTDEEFRRRIAQREKE 359
Query: 394 MGKEVPADAVNNMLANYVLP 413
GKEVP AV M AN+ +P
Sbjct: 360 EGKEVPETAVLEMKANFGIP 379
>gi|426388857|ref|XP_004060848.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
[Gorilla gorilla gorilla]
Length = 813
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 179/314 (57%), Gaps = 21/314 (6%)
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D I
Sbjct: 229 LPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVI 286
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C D E + F KNGKW+G A F LG A++PH+L+KN
Sbjct: 287 GCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVKN 333
Query: 224 VVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
V F ++P + + + +GP + +CE++MMVGLPA+GK
Sbjct: 334 CAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAAGK 391
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 392 TTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQI 451
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+VP
Sbjct: 452 AARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVP 511
Query: 400 ADAVNNMLANYVLP 413
AV M AN+ LP
Sbjct: 512 DHAVLEMKANFTLP 525
>gi|297277124|ref|XP_001094463.2| PREDICTED: hypothetical protein LOC706123 [Macaca mulatta]
Length = 767
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 180/316 (56%), Gaps = 20/316 (6%)
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+D +D+ HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 344 LDPKDSYSPDPHVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAEND 402
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I C D E + F KNGKW+G A F LG A++PH+L+
Sbjct: 403 VIGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALG-----------GQALYPHVLV 449
Query: 222 KNVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPAS 277
KN V F ++P + + + +GP + +CE++MMVGLPA+
Sbjct: 450 KNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAA 507
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLL 337
GKTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 508 GKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLI 567
Query: 338 SRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKE 397
A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK+
Sbjct: 568 QIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKD 627
Query: 398 VPADAVNNMLANYVLP 413
VP AV M AN+ LP
Sbjct: 628 VPDHAVLEMKANFTLP 643
>gi|345329423|ref|XP_001513552.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U
[Ornithorhynchus anatinus]
Length = 612
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 198/372 (53%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 65 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVK 124
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S + LGE E S+G+ G + +FG+KF D I
Sbjct: 125 HLYTKDIDIHEVRVGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDFGDKFDENDVI 183
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C ++ E + + +AKNG+ LG A + KE E A+FPH+L N
Sbjct: 184 ACFVNFEGDEVE-LSYAKNGQDLGVAFKIS-------------KEVLAERALFPHVLCHN 229
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ PV +++ + + + GP + KDCEV+MM+GLP +GKTT
Sbjct: 230 CAVEFNFGQKEEPYFPVPEEYTFIQKVPVDDRIRGPKGPDEKKDCEVVMMIGLPGAGKTT 289
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G R+ + + L+ RA + A+
Sbjct: 290 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAA 348
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 349 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 408
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 409 AVLKMKGNFTLP 420
>gi|351699621|gb|EHB02540.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1
[Heterocephalus glaber]
Length = 708
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 190/376 (50%), Gaps = 52/376 (13%)
Query: 44 VVLNPAD-CDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
V L P D CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 200 VTLIPGDNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISV 259
Query: 103 -DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 260 KHLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAEND 317
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I C D E + F KNGKW+G A F LG A++PH+L+
Sbjct: 318 VIGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLV 364
Query: 222 KNVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPAS 277
KN V F ++P + + + +GP + +CE++MMVGLPA+
Sbjct: 365 KNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILMMVGLPAA 422
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLL 337
GKTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 423 GKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLI 482
Query: 338 SRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKE 397
A+R RN+I+DQ EDLK R++KR E GK+
Sbjct: 483 QIAARKKRNYILDQ-----------------------------EDLKDRTIKRTDEEGKD 513
Query: 398 VPADAVNNMLANYVLP 413
VP AV M AN+ LP
Sbjct: 514 VPDHAVLEMKANFTLP 529
>gi|321471982|gb|EFX82953.1| hypothetical protein DAPPUDRAFT_30537 [Daphnia pulex]
Length = 415
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 207/383 (54%), Gaps = 22/383 (5%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ VVL+ + DL+ +I S L GFAY ++GARA+ G GK C+ K
Sbjct: 16 PEIEESLVVLDWFNSDLNLNINKTDFVSGAPLTDAGFAYMFAGARASYGFINGKVCYEVK 75
Query: 96 IVSTQPV-DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFG 154
+ V +ED+ P++ H+ RVG S D +LGE S+G+ G+ K S F ++G
Sbjct: 76 VTENLAVYHLEDSEPNR-HIIRVGWSV-DSTTYQLGEDPFSYGYEGSAKISEDCEFKDYG 133
Query: 155 EKFGVGDTIICAIDL-ESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
F + D + +D E K + F+ NG + G A F+ + L
Sbjct: 134 VPFKLNDVVGVYLDASEEKEFIELSFSVNGVFQGVA--FNLPRDELN-----------GR 180
Query: 214 AVFPHILLKNVVVVMQF--SVEQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMM 270
A+FPHIL KN + F E P EGY+ W S + N V G DC+++
Sbjct: 181 ALFPHILTKNCRFEVNFGQKEEPWFPPTEGYE-WASNIPVENRVRGTIAPATRADCKMIA 239
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
M GLP +GKTTWA K+ ++P++++ +LGTN LE+MK+ GL R+ NY+ER L
Sbjct: 240 MCGLPGAGKTTWANKFSAENPDRKFNILGTNAFLEKMKLNGLPRRKNYTERLDILNDMCV 299
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
I ++LL A++ RN+I+D TN+F +A K K+++F F++ AVV+ P E+ K R K+
Sbjct: 300 HILNILLKIAAKRRRNYILDHTNIFLAALKNKMKMFSGFKRKAVVIVPTEENAKFREGKK 359
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+E GK+V + +M AN+ +P
Sbjct: 360 IQEEGKDVLDSVILHMKANFQIP 382
>gi|334322322|ref|XP_003340222.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein U-like [Monodelphis domestica]
Length = 838
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 198/372 (53%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 301 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 360
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++G+KF D I
Sbjct: 361 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGDKFDENDVI 419
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E + + + +AKNG+ LG A + + KE E +FPH+L N
Sbjct: 420 SCFANFEGEEV-ELSYAKNGQDLGVAFKIN-------------KEVLAERPLFPHVLCHN 465
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP + KDCEV+MM+GLP +GKTT
Sbjct: 466 CAVEFNFGQKEEPYFPIPEEYTFIQNVSLDDRVRGPKGPDEKKDCEVVMMIGLPGAGKTT 525
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G R+ + + L+ RA + A+
Sbjct: 526 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAA 584
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 585 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 644
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 645 AVLKMKGNFTLP 656
>gi|395852663|ref|XP_003798854.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 2
[Otolemur garnettii]
Length = 823
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 286 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 345
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 346 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 404
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE E +FPH+L N
Sbjct: 405 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAERPLFPHVLCHN 450
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 451 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 510
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 511 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 569
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 570 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 629
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 630 AVLKMKGNFTLP 641
>gi|395852661|ref|XP_003798853.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 1
[Otolemur garnettii]
Length = 804
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 267 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 326
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 327 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 385
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE E +FPH+L N
Sbjct: 386 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAERPLFPHVLCHN 431
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 432 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 491
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 492 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 550
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 551 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 610
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 611 AVLKMKGNFTLP 622
>gi|350589336|ref|XP_003130615.3| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Sus scrofa]
Length = 813
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 288 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 347
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 348 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 406
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE E +FPH+L N
Sbjct: 407 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAERPLFPHVLCHN 452
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 453 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 512
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 513 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 571
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 572 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 631
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 632 AVLKMKGNFTLP 643
>gi|296479281|tpg|DAA21396.1| TPA: heterogeneous nuclear ribonucleoprotein U [Bos taurus]
Length = 717
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 288 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 347
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 348 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 406
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 407 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 452
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 453 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 512
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 513 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 571
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 572 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 631
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 632 AVLKMKGNFTLP 643
>gi|395531501|ref|XP_003767816.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Sarcophilus
harrisii]
Length = 597
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 197/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 60 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 119
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 120 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 178
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E + + + +AKNG+ LG A + + KE +FPH+L N
Sbjct: 179 SCFANFEGEEVE-LSYAKNGQDLGVAFKIN-------------KEVLAGRPLFPHVLCHN 224
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP + KDCEV+MM+GLP +GKTT
Sbjct: 225 CAVEFNFGQKEEPYFPIPEEYTFIQNVSLDDRVRGPKGPDEKKDCEVVMMIGLPGAGKTT 284
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G R+ + + L+ RA + A+
Sbjct: 285 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAA 343
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 344 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 403
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 404 AVLKMKGNFTLP 415
>gi|291402068|ref|XP_002717682.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 2
[Oryctolagus cuniculus]
Length = 806
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 269 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 328
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 329 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 387
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 388 TCFANFESDEV-ELSYAKNGQELGVAFKIS-------------KEVLAGRPLFPHVLCHN 433
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 434 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 493
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 494 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 552
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 553 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 612
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 613 AVLKMKGNFTLP 624
>gi|291402066|ref|XP_002717681.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 1
[Oryctolagus cuniculus]
Length = 825
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 288 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 347
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 348 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 406
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 407 TCFANFESDEV-ELSYAKNGQELGVAFKIS-------------KEVLAGRPLFPHVLCHN 452
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 453 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 512
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 513 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 571
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 572 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 631
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 632 AVLKMKGNFTLP 643
>gi|67968810|dbj|BAE00762.1| unnamed protein product [Macaca fascicularis]
Length = 727
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 227 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 286
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 287 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 345
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 346 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 391
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 392 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 451
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 452 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 510
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 511 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 570
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 571 AVLKMKGNFTLP 582
>gi|355559120|gb|EHH15900.1| hypothetical protein EGK_02062, partial [Macaca mulatta]
Length = 711
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 215 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 274
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 275 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCSCETEDYGEKFDENDVI 333
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 334 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 379
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 380 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 439
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 440 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 498
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 499 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 558
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 559 AVLKMKGNFTLP 570
>gi|194386122|dbj|BAG59625.1| unnamed protein product [Homo sapiens]
Length = 784
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 247 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 306
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 307 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 365
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 366 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 411
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 412 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 471
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 472 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 530
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 531 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 590
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 591 AVLKMKGNFTLP 602
>gi|32358|emb|CAA46472.1| hnRNP U protein [Homo sapiens]
Length = 806
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 269 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 328
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 329 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 387
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 388 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 433
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 434 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 493
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 494 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 552
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 553 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 612
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 613 AVLKMKGNFTLP 624
>gi|14141161|ref|NP_004492.2| heterogeneous nuclear ribonucleoprotein U isoform b [Homo sapiens]
gi|397473051|ref|XP_003808035.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 1 [Pan
paniscus]
gi|13097201|gb|AAH03367.1| Heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Homo sapiens]
gi|13177673|gb|AAH03621.1| Heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Homo sapiens]
gi|19354327|gb|AAH24767.1| Heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Homo sapiens]
gi|123993281|gb|ABM84242.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [synthetic construct]
gi|124000243|gb|ABM87630.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [synthetic construct]
gi|168277746|dbj|BAG10851.1| heterogeneous nuclear ribonucleoprotein U [synthetic construct]
gi|343959740|dbj|BAK63727.1| heterogeneous nuclear ribonucleoprotein U [Pan troglodytes]
gi|410228106|gb|JAA11272.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Pan troglodytes]
gi|410228110|gb|JAA11274.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Pan troglodytes]
gi|410305028|gb|JAA31114.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Pan troglodytes]
gi|410305032|gb|JAA31116.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Pan troglodytes]
gi|410350883|gb|JAA42045.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Pan troglodytes]
gi|410350887|gb|JAA42047.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Pan troglodytes]
Length = 806
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 269 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 328
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 329 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 387
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 388 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 433
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 434 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 493
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 494 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 552
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 553 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 612
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 613 AVLKMKGNFTLP 624
>gi|193785231|dbj|BAG54384.1| unnamed protein product [Homo sapiens]
Length = 750
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 213 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 272
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 273 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 331
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 332 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 377
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 378 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 437
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 438 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 496
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 497 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 556
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 557 AVLKMKGNFTLP 568
>gi|426334401|ref|XP_004028741.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 2
[Gorilla gorilla gorilla]
Length = 825
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 288 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 347
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 348 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 406
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 407 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 452
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 453 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 512
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 513 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 571
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 572 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 631
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 632 AVLKMKGNFTLP 643
>gi|402858465|ref|XP_003893725.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 1
[Papio anubis]
Length = 806
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 269 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 328
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 329 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 387
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 388 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 433
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 434 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 493
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 494 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 552
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 553 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 612
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 613 AVLKMKGNFTLP 624
>gi|3202000|gb|AAC19382.1| scaffold attachment factor A [Homo sapiens]
Length = 824
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 287 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 346
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 347 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 405
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 406 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 451
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 452 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 511
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 512 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 570
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 571 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 630
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 631 AVLKMKGNFTLP 642
>gi|426334399|ref|XP_004028740.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 1
[Gorilla gorilla gorilla]
Length = 806
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 269 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 328
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 329 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 387
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 388 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 433
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 434 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 493
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 494 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 552
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 553 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 612
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 613 AVLKMKGNFTLP 624
>gi|332812460|ref|XP_514313.3| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein U [Pan troglodytes]
Length = 814
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 277 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 336
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 337 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 395
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 396 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 441
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 442 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 501
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 502 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 560
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 561 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 620
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 621 AVLKMKGNFTLP 632
>gi|297281700|ref|XP_002802137.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like isoform 3
[Macaca mulatta]
Length = 760
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 216 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 275
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 276 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 334
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 335 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 380
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 381 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 440
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 441 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 499
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 500 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 559
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 560 AVLKMKGNFTLP 571
>gi|410985737|ref|XP_003999173.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Felis catus]
Length = 653
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 144 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 203
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 204 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 262
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 263 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEILAGRPLFPHVLCHN 308
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 309 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 368
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 369 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 427
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 428 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 487
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 488 AVLKMKGNFTLP 499
>gi|395728795|ref|XP_002809274.2| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein U [Pongo abelii]
Length = 996
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 459 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 518
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 519 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 577
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 578 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 623
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 624 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 683
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 684 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 742
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 743 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 802
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 803 AVLKMKGNFTLP 814
>gi|74136883|ref|NP_114032.2| heterogeneous nuclear ribonucleoprotein U isoform a [Homo sapiens]
gi|397473053|ref|XP_003808036.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 2 [Pan
paniscus]
gi|254763463|sp|Q00839.6|HNRPU_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein U;
Short=hnRNP U; AltName: Full=Scaffold attachment factor
A; Short=SAF-A; AltName: Full=p120; AltName: Full=pp120
gi|410228108|gb|JAA11273.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Pan troglodytes]
gi|410305030|gb|JAA31115.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Pan troglodytes]
gi|410350885|gb|JAA42046.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Pan troglodytes]
Length = 825
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 288 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 347
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 348 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 406
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 407 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 452
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 453 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 512
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 513 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 571
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 572 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 631
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 632 AVLKMKGNFTLP 643
>gi|301765586|ref|XP_002918214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like
[Ailuropoda melanoleuca]
Length = 807
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 269 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 328
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 329 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 387
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES+ + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 388 TCFANFESEEV-ELSYAKNGQDLGIAFKIS-------------KEILAGRPLFPHVLCHN 433
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 434 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 493
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 494 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 552
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 553 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 612
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 613 AVLKMKGNFTLP 624
>gi|297281698|ref|XP_002802136.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like isoform 2
[Macaca mulatta]
Length = 813
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 269 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 328
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 329 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 387
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 388 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 433
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 434 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 493
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 494 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 552
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 553 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 612
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 613 AVLKMKGNFTLP 624
>gi|344278373|ref|XP_003410969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 2
[Loxodonta africana]
Length = 805
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 268 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 327
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 328 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 386
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 387 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 432
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 433 CAVEFNFGQKEKPYFPIPEDCTFIQNVSLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 492
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 493 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 551
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 552 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 611
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 612 AVLKMKGNFTLP 623
>gi|402858467|ref|XP_003893726.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 2
[Papio anubis]
Length = 825
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 288 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 347
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 348 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 406
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 407 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 452
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 453 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 512
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 513 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 571
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 572 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 631
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 632 AVLKMKGNFTLP 643
>gi|296230808|ref|XP_002760896.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 2
[Callithrix jacchus]
Length = 806
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 269 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 328
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 329 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 387
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 388 TCFANFESDDV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 433
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 434 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 493
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 494 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 552
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 553 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 612
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 613 AVLKMKGNFTLP 624
>gi|344278371|ref|XP_003410968.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 1
[Loxodonta africana]
Length = 824
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 287 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 346
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 347 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 405
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 406 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 451
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 452 CAVEFNFGQKEKPYFPIPEDCTFIQNVSLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 511
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 512 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 570
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 571 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 630
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 631 AVLKMKGNFTLP 642
>gi|45827651|gb|AAS78464.1| nuclear ribonucleoprotein U-like protein [Danio rerio]
Length = 652
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 196/376 (52%), Gaps = 18/376 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+P +CDL F + N +S L E FA+ W+G RA+ G+N GK CF K+ P+
Sbjct: 205 VCLDPYNCDLHFKVSRNRYSASSLTMESFAHLWAGGRASYGVNKGKVCFEMKVTEKTPIK 264
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
++ H +G S + + LGE E S+ + GK + ++GE F D I
Sbjct: 265 HLNSKIMDFHDVHIGWSLANGCLS-LGEEEFSYSYSDKGKKASNCVTEDYGEGFDENDVI 323
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C I+ E+ + I F+KNG N LGV KE + A+FPH+L N
Sbjct: 324 GCFINFEADEV-EISFSKNG-------------NDLGVAFKVNKESLADRALFPHVLCHN 369
Query: 224 VVVVMQFSV-EQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPASGKTT 281
V F E P +++ + + GP KDCEV++MVGLP SGKTT
Sbjct: 370 CTVEFNFGQNETPFFPKLEDFTFMQQIPLEERIRGPKGPVAKKDCEVIVMVGLPGSGKTT 429
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K V+++P K Y +L TN +LE++ + + R++ + + R L+ A+
Sbjct: 430 WVVKHVEENPGK-YNILSTNTVLEKLMINSVKRQNKDITKLMAISQRVPFYLGKLIEIAA 488
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R R++I+DQTNV +A++RK+ LF F++ AVVVFP E+LK R+ K+ + GK++P
Sbjct: 489 RKKRHYILDQTNVSSAAQRRKMCLFAGFQRKAVVVFPTDENLKERAQKKAEADGKDIPEH 548
Query: 402 AVNNMLANYVLPVNKD 417
A+ M A Y LP D
Sbjct: 549 ALLKMKALYTLPEQGD 564
>gi|297281696|ref|XP_001102264.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like isoform 1
[Macaca mulatta]
Length = 832
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 288 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 347
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 348 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 406
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 407 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 452
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 453 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 512
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 513 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 571
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 572 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 631
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 632 AVLKMKGNFTLP 643
>gi|149040843|gb|EDL94800.1| rCG20317, isoform CRA_a [Rattus norvegicus]
Length = 803
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 262 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 321
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 322 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 380
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 381 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 426
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 427 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 486
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 487 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 545
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 546 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 605
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 606 AVLKMKGNFTLP 617
>gi|16041796|gb|AAH15782.1| HNRPU protein [Homo sapiens]
gi|190689399|gb|ACE86474.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) protein [synthetic construct]
gi|190690761|gb|ACE87155.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) protein [synthetic construct]
Length = 722
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 185 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 244
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 245 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 303
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 304 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 349
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 350 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 409
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 410 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 468
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 469 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 528
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 529 AVLKMKGNFTLP 540
>gi|74211462|dbj|BAE26473.1| unnamed protein product [Mus musculus]
Length = 800
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 264 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 323
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 324 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 382
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 383 TCFANFETDEVG-LSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 428
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 429 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 488
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 489 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 547
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 548 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 607
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 608 AVLKMKGNFTLP 619
>gi|148681230|gb|EDL13177.1| heterogeneous nuclear ribonucleoprotein U, isoform CRA_b [Mus
musculus]
Length = 793
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 264 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 323
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 324 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 382
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 383 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 428
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 429 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 488
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 489 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 547
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 548 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 607
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 608 AVLKMKGNFTLP 619
>gi|26354194|dbj|BAC40725.1| unnamed protein product [Mus musculus]
Length = 800
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 264 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 323
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 324 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 382
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 383 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 428
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 429 YAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 488
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 489 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 547
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 548 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 607
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 608 AVLKMKGNFTLP 619
>gi|426240297|ref|XP_004014047.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Ovis aries]
Length = 688
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 151 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 210
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 211 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 269
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 270 TCFANFESDEVE-LSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 315
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 316 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 375
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 376 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 434
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 435 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 494
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 495 AVLKMKGNFTLP 506
>gi|3329496|gb|AAC26866.1| heterogenous nuclear ribonucleoprotein U [Mus musculus]
Length = 798
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 262 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 321
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 322 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 380
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 381 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 426
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 427 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 486
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 487 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 545
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 546 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 605
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 606 AVLKMKGNFTLP 617
>gi|345802949|ref|XP_537222.3| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein U isoform 1 [Canis lupus familiaris]
Length = 883
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 346 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 405
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 406 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 464
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 465 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEILAGRPLFPHVLCHN 510
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 511 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 570
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 571 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 629
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 630 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 689
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 690 AVLKMKGNFTLP 701
>gi|380787611|gb|AFE65681.1| heterogeneous nuclear ribonucleoprotein U isoform b [Macaca
mulatta]
Length = 806
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 269 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 328
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 329 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 387
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 388 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEILAGLPLFPHVLCHN 433
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 434 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 493
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 494 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 552
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 553 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 612
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 613 AVLKMKGNFTLP 624
>gi|125991756|ref|NP_001070388.2| heterogeneous nuclear ribonucleoprotein U [Bos taurus]
gi|124828988|gb|AAI33330.1| Heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Bos taurus]
Length = 825
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 288 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 347
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 348 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 406
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 407 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 452
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 453 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 512
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 513 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 571
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 572 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 631
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 632 AVLKMKGNFTLP 643
>gi|354475984|ref|XP_003500205.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Cricetulus
griseus]
Length = 619
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 83 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 142
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 143 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 201
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 202 TCFANFETDEVE-LSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 247
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 248 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 307
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 308 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 366
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 367 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 426
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 427 AVLKMKGNFTLP 438
>gi|332236383|ref|XP_003267383.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Nomascus
leucogenys]
Length = 722
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 185 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 244
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 245 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 303
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 304 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 349
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 350 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 409
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 410 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 468
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 469 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 528
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 529 AVLKMKGNFTLP 540
>gi|348577071|ref|XP_003474308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like isoform 1
[Cavia porcellus]
Length = 803
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 266 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 325
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 326 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 384
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 385 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 430
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 431 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 490
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 491 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 549
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 550 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 609
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 610 AVLKMKGNFTLP 621
>gi|380787637|gb|AFE65694.1| heterogeneous nuclear ribonucleoprotein U isoform a [Macaca
mulatta]
Length = 825
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 288 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 347
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 348 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 406
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 407 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEILAGLPLFPHVLCHN 452
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 453 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 512
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 513 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 571
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 572 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 631
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 632 AVLKMKGNFTLP 643
>gi|348577073|ref|XP_003474309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like isoform 2
[Cavia porcellus]
Length = 822
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 285 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 344
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 345 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 403
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 404 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 449
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 450 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 509
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 510 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 568
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 569 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 628
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 629 AVLKMKGNFTLP 640
>gi|74198105|dbj|BAE35231.1| unnamed protein product [Mus musculus]
Length = 800
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 264 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 323
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 324 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 382
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 383 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 428
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 429 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 488
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 489 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 547
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 548 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 607
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 608 AVLKMKGNFTLP 619
>gi|449662041|ref|XP_002158606.2| PREDICTED: uncharacterized protein LOC100205549 [Hydra
magnipapillata]
Length = 1528
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 187/324 (57%), Gaps = 20/324 (6%)
Query: 91 CFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNF 150
CF ++ V++ D + +V RVG S D +LGE + S+G+GGT K S+ F
Sbjct: 348 CFEVHLLEELKVNIADE--NDLYVSRVGWS-IDGSDYQLGEDKFSWGYGGTAKSSNECKF 404
Query: 151 LNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQ 210
++G++FGVGDT+ C +DL++ P A I + NG++LG A +F E
Sbjct: 405 RDYGKRFGVGDTVTCYVDLDASPKA-IFYMVNGEYLGVAFRF-------------TNELT 450
Query: 211 CESAVFPHILLKNVVVVMQFSVEQGLIPV-EGYKSWVSALDDGNSVLGPTFCNMKDCEVM 269
A+FPHI KN+ + F + P+ G+ A + + GPT ++ E++
Sbjct: 451 KSQALFPHIACKNMKFRVNFGAQPPKFPLTNGFVLIQHASELISPPPGPT--KPEEAEII 508
Query: 270 MMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRA 329
MMVGLP SGK+ W EK+ DH EK+Y +LGTN I+++MKV L +K NY R++ L+ RA
Sbjct: 509 MMVGLPGSGKSYWCEKYASDHKEKKYYILGTNFIIDRMKVSNLGKKRNYHGRWEELIKRA 568
Query: 330 NAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVK 389
+AI + L A PRN+I+DQTNV+ +AR+RK+ F +++IA V+ KP L R K
Sbjct: 569 SAILNKLFDVAKTRPRNYILDQTNVYFTARRRKMESFRGYKRIAAVLINKPAVLSDRIEK 628
Query: 390 RFKEMGKEVPADAVNNMLANYVLP 413
+ K GK +P +AV M N+ LP
Sbjct: 629 QKKIEGKFIPDEAVLEMKKNFTLP 652
>gi|148747541|ref|NP_476480.2| heterogeneous nuclear ribonucleoprotein U [Rattus norvegicus]
gi|47938967|gb|AAH72529.1| Heterogeneous nuclear ribonucleoprotein U [Rattus norvegicus]
gi|149040844|gb|EDL94801.1| rCG20317, isoform CRA_b [Rattus norvegicus]
Length = 798
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 262 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 321
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 322 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 380
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 381 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 426
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 427 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 486
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 487 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 545
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 546 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 605
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 606 AVLKMKGNFTLP 617
>gi|624918|dbj|BAA03136.1| SP120 [Rattus norvegicus]
Length = 798
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 262 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 321
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 322 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 380
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 381 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 426
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 427 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 486
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 487 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 545
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 546 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 605
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 606 AVLKMKGNFTLP 617
>gi|160333923|ref|NP_058085.2| heterogeneous nuclear ribonucleoprotein U [Mus musculus]
gi|81879424|sp|Q8VEK3.1|HNRPU_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein U;
Short=hnRNP U; AltName: Full=Scaffold attachment factor
A; Short=SAF-A
gi|17390825|gb|AAH18353.1| Hnrpu protein [Mus musculus]
gi|74139009|dbj|BAE38409.1| unnamed protein product [Mus musculus]
gi|148681229|gb|EDL13176.1| heterogeneous nuclear ribonucleoprotein U, isoform CRA_a [Mus
musculus]
Length = 800
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 264 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 323
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 324 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 382
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 383 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 428
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 429 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 488
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 489 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 547
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 548 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 607
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 608 AVLKMKGNFTLP 619
>gi|390477574|ref|XP_002760895.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U isoform 1
[Callithrix jacchus]
Length = 722
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 185 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 244
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 245 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 303
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 304 TCFANFESDDV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 349
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 350 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 409
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 410 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 468
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 469 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 528
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 529 AVLKMKGNFTLP 540
>gi|74219852|dbj|BAE40513.1| unnamed protein product [Mus musculus]
Length = 686
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 150 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 209
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 210 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 268
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 269 TCFANFETDEVE-LSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 314
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 315 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 374
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 375 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 433
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 434 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 493
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 494 AVLKMKGNFTLP 505
>gi|338722702|ref|XP_001494086.3| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Equus
caballus]
Length = 655
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 118 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 177
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 178 HLYTKDIDIHEVRIGWSLTASGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 236
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 237 TCFANFESDEV-ELSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 282
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 283 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 342
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 343 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 401
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 402 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 461
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 462 AVLKMKGNFTLP 473
>gi|328786150|ref|XP_392041.4| PREDICTED: hypothetical protein LOC408497 [Apis mellifera]
Length = 1088
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 202/375 (53%), Gaps = 22/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGL-KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
++L+ D DL+ I+ +G ++ +H +GF++ W+GARA+ G GK + KIV +
Sbjct: 478 LILSWYDSDLNLVIDKDGFFTATPMHNDGFSHMWAGARASYGFLCGKVYYEAKIVEHCTI 537
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ E+ + HV R+G S + +LGE + SFG+ TGK + ++G +FG D
Sbjct: 538 NTENE--EHPHVLRIGWSTLYTSM-QLGEEKFSFGYSSTGKKLTDNQYEDYGLQFGKDDI 594
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D S+ + + + NGK G+ S KE + +FPHIL K
Sbjct: 595 IGCYFDATSENIL-LSYTVNGK-------------DQGIAFSISKEELGDKPLFPHILSK 640
Query: 223 NVVVVMQFSVEQGLIP--VEGYKSWVSALDDGNSVLGPTFCNMKD-CEVMMMVGLPASGK 279
N F E +E Y S + ++ + GP KD CEV+MM GLPA GK
Sbjct: 641 NCSFACNFGQETPWTEEILEDYVS-IGNVESQYKISGPRRPEKKDECEVIMMCGLPACGK 699
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K+ +HP+K Y +LG + ++ +MK PGL K Y ++++ L+ + + L+
Sbjct: 700 TTWATKYATEHPQKMYNILGLSSLINKMKDPGLSYKEGYEDQWKILIDKCTDALNKLMEM 759
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
AS RN+I+DQTNV+ SA++RK++ F +++ AVV+ P E+ K RS+K GKE+
Sbjct: 760 ASSRRRNYILDQTNVYPSAQRRKMKNFCGYQRRAVVIVPSEEEFKSRSMKHKPIKGKEIT 819
Query: 400 ADAVNNMLANYVLPV 414
+ M AN+ PV
Sbjct: 820 DSMLLEMKANFRAPV 834
>gi|74213391|dbj|BAE35512.1| unnamed protein product [Mus musculus]
Length = 800
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 196/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 264 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 323
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 324 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLRGIKTCNCETEDYGEKFDENDVI 382
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 383 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 428
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 429 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 488
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 489 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 547
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 548 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 607
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 608 AVLKMKGNFTLP 619
>gi|349603267|gb|AEP99154.1| Heteroproteinous nuclear ribonucleoprotein U-like protein, partial
[Equus caballus]
Length = 570
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 50 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 109
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 110 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 168
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 169 TCFANFESDEVE-LSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHN 214
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 215 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 274
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 275 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 333
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 334 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 393
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 394 AVLKMKGNFTLP 405
>gi|351695173|gb|EHA98091.1| Heterogeneous nuclear ribonucleoprotein U, partial [Heterocephalus
glaber]
Length = 611
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 194/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 58 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 117
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 118 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 176
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LGV KE +FPH+L N
Sbjct: 177 TCFANFESDEVE-LSYAKNGQ-------------DLGVAFKISKEILAGRPLFPHVLCHN 222
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 223 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 282
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 283 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 341
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 342 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 401
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 402 AVLKMKGNFTLP 413
>gi|417411410|gb|JAA52143.1| Putative scaffold/matrix specific factor hnrnp-u/saf-a, partial
[Desmodus rotundus]
Length = 527
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 193/366 (52%), Gaps = 18/366 (4%)
Query: 50 DCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPP 109
+CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV T
Sbjct: 3 NCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKD 62
Query: 110 DQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDL 169
H R+G S + LGE E S+G+ G + ++GEKF D I C +
Sbjct: 63 IDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANF 121
Query: 170 ESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQ 229
ES + + +AKNG+ LG A + KE +FPH+L N V
Sbjct: 122 ESDEVE-LSYAKNGQELGVAFKIS-------------KEVLAGRPLFPHVLCHNCAVEFN 167
Query: 230 F-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWV 287
F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTTW K
Sbjct: 168 FGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHA 227
Query: 288 KDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNF 347
++P K Y +LGTN I+++M V G ++ + + L+ RA + A+R RNF
Sbjct: 228 AENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNF 286
Query: 348 IIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNML 407
I+DQTNV +A++RK+ LFV F++ AVVV PK ED K R+ K+ + GK++P AV M
Sbjct: 287 ILDQTNVSAAAQRRKMCLFVGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMK 346
Query: 408 ANYVLP 413
N+ LP
Sbjct: 347 GNFTLP 352
>gi|39645240|gb|AAH07950.2| HNRPU protein, partial [Homo sapiens]
Length = 705
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 194/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 168 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 227
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 228 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 286
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 287 TCFANFESDEV-ELSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHN 332
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 333 CAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 392
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 393 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 451
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ VVV PK ED K R+ K+ + GK++P
Sbjct: 452 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKVVVVCPKDEDYKQRTQKKAEVEGKDLPEH 511
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 512 AVLKMKGNFTLP 523
>gi|108742062|gb|AAI17609.1| Hnrnpu protein [Danio rerio]
Length = 795
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 196/376 (52%), Gaps = 18/376 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+P +CDL F + N +S L E FA+ W+G RA+ G+N GK CF K+ P+
Sbjct: 205 VCLDPYNCDLHFKVSRNRYSASSLTMESFAHLWAGGRASYGVNKGKVCFEMKVTEKTPIK 264
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
++ H +G S + + LGE E S+ + GK + ++GE F D I
Sbjct: 265 HLNSKIMDFHDVHIGWSLANGCLS-LGEEEFSYSYSDKGKKASNCVTEDYGEGFDENDVI 323
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C I+ E+ + I F+KNG N LGV KE + A+FPH+L N
Sbjct: 324 GCFINFEADEV-EISFSKNG-------------NDLGVAFKVNKESLADRALFPHVLCHN 369
Query: 224 VVVVMQFSV-EQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPASGKTT 281
V F E P +++ + + GP KDCEV++MVGLP SGKTT
Sbjct: 370 CTVEFNFGQNETPFFPKLEDFTFMQQIPLEERIRGPKGPVAKKDCEVIVMVGLPGSGKTT 429
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K V+++P K Y +L TN +LE++ + + R++ + + R L+ A+
Sbjct: 430 WVVKHVEENPGK-YNILSTNTVLEKLMINSVKRQNKDITKLMAISQRVPFYLGKLIEIAA 488
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R R++I+DQTNV +A++RK+ LF F++ AVVVFP E+LK R+ K+ + GK++P
Sbjct: 489 RKKRHYILDQTNVSSAAQRRKMCLFAGFQRKAVVVFPTDENLKERAQKKAEADGKDIPEH 548
Query: 402 AVNNMLANYVLPVNKD 417
A+ M A Y LP D
Sbjct: 549 ALLKMKALYTLPEQGD 564
>gi|391224464|ref|NP_001028767.2| heterogeneous nuclear ribonucleoprotein U [Danio rerio]
Length = 796
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 196/376 (52%), Gaps = 18/376 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+P +CDL F + N +S L E FA+ W+G RA+ G+N GK CF K+ P+
Sbjct: 205 VCLDPYNCDLHFKVSRNRYSASSLTMESFAHLWAGGRASYGVNKGKVCFEMKVTEKTPIK 264
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
++ H +G S + + LGE E S+ + GK + ++GE F D I
Sbjct: 265 HLNSKIMDFHDVHIGWSLANGCLS-LGEEEFSYSYSDKGKKASNCVTEDYGEGFDENDVI 323
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C I+ E+ + I F+KNG N LGV KE + A+FPH+L N
Sbjct: 324 GCFINFEADEV-EISFSKNG-------------NDLGVAFKVNKESLADRALFPHVLCHN 369
Query: 224 VVVVMQFSV-EQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPASGKTT 281
V F E P +++ + + GP KDCEV++MVGLP SGKTT
Sbjct: 370 CTVEFNFGQNETPFFPKLEDFTFMQQIPLEERIRGPKGPVAKKDCEVIVMVGLPGSGKTT 429
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K V+++P K Y +L TN +LE++ + + R++ + + R L+ A+
Sbjct: 430 WVVKHVEENPGK-YNILSTNTVLEKLMINSVKRQNKDITKLMAISQRVPFYLGKLIEIAA 488
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R R++I+DQTNV +A++RK+ LF F++ AVVVFP E+LK R+ K+ + GK++P
Sbjct: 489 RKKRHYILDQTNVSSAAQRRKMCLFAGFQRKAVVVFPTDENLKERAQKKAEADGKDIPEH 548
Query: 402 AVNNMLANYVLPVNKD 417
A+ M A Y LP D
Sbjct: 549 ALLKMKALYTLPEQGD 564
>gi|417411460|gb|JAA52165.1| Putative scaffold/matrix specific factor hnrnp-u/saf-a, partial
[Desmodus rotundus]
Length = 534
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 193/366 (52%), Gaps = 18/366 (4%)
Query: 50 DCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPP 109
+CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV T
Sbjct: 3 NCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKD 62
Query: 110 DQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDL 169
H R+G S + LGE E S+G+ G + ++GEKF D I C +
Sbjct: 63 IDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANF 121
Query: 170 ESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQ 229
ES + + +AKNG+ LG A + KE +FPH+L N V
Sbjct: 122 ESDEVE-LSYAKNGQELGVAFKIS-------------KEVLAGRPLFPHVLCHNCAVEFN 167
Query: 230 F-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWV 287
F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTTW K
Sbjct: 168 FGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHA 227
Query: 288 KDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNF 347
++P K Y +LGTN I+++M V G ++ + + L+ RA + A+R RNF
Sbjct: 228 AENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNF 286
Query: 348 IIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNML 407
I+DQTNV +A++RK+ LFV F++ AVVV PK ED K R+ K+ + GK++P AV M
Sbjct: 287 ILDQTNVSAAAQRRKMCLFVGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMK 346
Query: 408 ANYVLP 413
N+ LP
Sbjct: 347 GNFTLP 352
>gi|54311369|gb|AAH84742.1| Saf-A protein [Xenopus laevis]
Length = 772
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 193/374 (51%), Gaps = 23/374 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V+L+ +CDL F I + L +S L E FA W+G RA G++ GK CF K+ PV
Sbjct: 230 VLLDTYNCDLHFKISRDRLSASSLTMESFALLWAGGRATYGVSKGKVCFEMKVTEKIPVK 289
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S LGE E S+G+ + G +GEK+ D I
Sbjct: 290 HVYTKETDVHEVRVGWSMSSSGY-MLGEEENSYGYSLKAAKCYNGVAEEYGEKYDENDVI 348
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E + + +AKNG+ LG A + K+ E ++FPH+L N
Sbjct: 349 TCCANFEEDEV-ELSYAKNGQDLGVAFKIS-------------KDNLSEQSLFPHVLCHN 394
Query: 224 VVVVMQF-SVEQGLIPV-EGYK--SWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
V F + + P+ EGY V D + LGP +DCEV+MMVGLP +GK
Sbjct: 395 CAVEFNFGQMAEPFFPIPEGYTLIQNVPLEDRVRAPLGPDL--KQDCEVIMMVGLPGAGK 452
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTW +K++P K Y +LGTN I+E+M V G ++ + + + L+ RA +
Sbjct: 453 TTWVNTHIKENPGK-YNILGTNTIMEKMTV-GCKKQVSDTGKLNALLQRAPQCLSKFIEI 510
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R R+FI+DQTNV +A++RK+ LF F++ A+VV P E K R+ K+ + GK++P
Sbjct: 511 AARKRRHFILDQTNVSSAAQRRKMCLFAGFQRKAIVVCPTDEVYKERTQKKSEVEGKDLP 570
Query: 400 ADAVNNMLANYVLP 413
AV M N LP
Sbjct: 571 EHAVLKMKGNLTLP 584
>gi|10801618|dbj|BAB16726.1| hypothetical protein [Macaca fascicularis]
Length = 549
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 192/366 (52%), Gaps = 18/366 (4%)
Query: 50 DCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPP 109
+CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV T
Sbjct: 18 NCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKD 77
Query: 110 DQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDL 169
H R+G S + LGE E S+G+ G + ++GEKF D I C +
Sbjct: 78 IDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANF 136
Query: 170 ESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQ 229
ES + + +AKNG+ LG A + KE +FPH+L N V
Sbjct: 137 ESDEVE-LSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHNCAVEFN 182
Query: 230 F-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWV 287
F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTTW K
Sbjct: 183 FGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHA 242
Query: 288 KDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNF 347
++P K Y +LGTN I+++M V G ++ + + L+ RA + A+R RNF
Sbjct: 243 AENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNF 301
Query: 348 IIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNML 407
I+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P AV M
Sbjct: 302 ILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMK 361
Query: 408 ANYVLP 413
N+ LP
Sbjct: 362 GNFTLP 367
>gi|147904138|ref|NP_001084218.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Xenopus laevis]
gi|4106370|gb|AAD02820.1| scaffold attachment factor A [Xenopus laevis]
Length = 774
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 193/374 (51%), Gaps = 23/374 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V+L+ +CDL F I + L +S L E FA W+G RA G++ GK CF K+ PV
Sbjct: 232 VLLDTYNCDLHFKISRDRLSASSLTMESFALLWAGGRATYGVSKGKVCFEMKVTEKIPVK 291
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S LGE E S+G+ + G +GEK+ D I
Sbjct: 292 HVYTKETDVHEVRVGWSMSSSGY-MLGEEENSYGYSLKAAKCYNGVAEEYGEKYDENDVI 350
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E + + +AKNG+ LG A + K+ E ++FPH+L N
Sbjct: 351 TCCDNFEEDEV-ELSYAKNGQDLGVAFKIS-------------KDNLSEQSLFPHVLCHN 396
Query: 224 VVVVMQF-SVEQGLIPV-EGYK--SWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
V F + + P+ EGY V D + LGP +DCEV+MMVGLP +GK
Sbjct: 397 CAVEFNFGQMAEPFFPIPEGYTLIQNVPLEDRVRAPLGPDL--KQDCEVIMMVGLPGAGK 454
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTW +K++P K Y +LGTN I+E+M V G ++ + + + L+ RA +
Sbjct: 455 TTWVNTHIKENPGK-YNILGTNTIMEKMTV-GCKKQVSDTGKLNALLQRAPQCLSKFIEI 512
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R R+FI+DQTNV +A++RK+ LF F++ A+VV P E K R+ K+ + GK++P
Sbjct: 513 AARKRRHFILDQTNVSSAAQRRKMCLFAGFQRKAIVVCPTDEVYKERTQKKSEVEGKDLP 572
Query: 400 ADAVNNMLANYVLP 413
AV M N LP
Sbjct: 573 EHAVLKMKGNLTLP 586
>gi|383854800|ref|XP_003702908.1| PREDICTED: uncharacterized protein LOC100875790 [Megachile
rotundata]
Length = 1105
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 198/375 (52%), Gaps = 21/375 (5%)
Query: 44 VVLNPADCDLDFDIEDNGL-KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
++L+ D DL+ I+ G ++ +H +GF++ W+GARA+ G GK + KIV PV
Sbjct: 490 LILSWYDSDLNLVIDKEGFFTATPMHNDGFSHMWAGARASYGFLCGKVYYEAKIVDHCPV 549
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ E+ + HV R+G S + +LGE + SFG+ TGK N+ ++G +FG D
Sbjct: 550 NTENE--EYPHVLRIGWSTPYTSM-QLGEEKFSFGYCSTGKKLTDNNYEDYGVQFGKDDI 606
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D S+ + + NGK G A F LG + +FPHIL K
Sbjct: 607 IGCYFDATSESDVVLTYTVNGKDQGIA--FSISKQELG-----------DKPLFPHILSK 653
Query: 223 NVVVVMQFSVEQGLIP--VEGYKSWVSALDDGNSVLGPTFCNMKD-CEVMMMVGLPASGK 279
N F E ++ Y S + ++ + GP K+ CEV+MM GLPA GK
Sbjct: 654 NCSFACNFGQETPWTEEILQDYVS-IGNVESQYKIPGPRRPERKEECEVIMMCGLPACGK 712
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K+ +HP K Y +LG ++++MK P L K Y +++ L+ + D LL
Sbjct: 713 TTWATKYAAEHPHKMYNVLGLGNLIDKMKDPELSDKEEYDAQWKILIQKCTYALDKLLEM 772
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
AS RN+I+DQTNV+ SA++RK++ F +++ A+V+ P E+ K+R+ GKE+
Sbjct: 773 ASSRRRNYILDQTNVYPSAQRRKMKNFCGYQRKAIVLVPSEEEFKLRTANHKPIEGKEIT 832
Query: 400 ADAVNNMLANYVLPV 414
+ M AN+ PV
Sbjct: 833 ESMLLEMKANFRAPV 847
>gi|74186692|dbj|BAE34802.1| unnamed protein product [Mus musculus]
Length = 800
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 195/372 (52%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+ RA+ G++ GK CF K+ PV
Sbjct: 264 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWARGRASYGVSKGKVCFEMKVTEKIPVR 323
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 324 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 382
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 383 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 428
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 429 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 488
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 489 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 547
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 548 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 607
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 608 AVLKMKGNFTLP 619
>gi|115305387|gb|AAI23745.1| HNRNPU protein [Bos taurus]
Length = 550
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 192/366 (52%), Gaps = 18/366 (4%)
Query: 50 DCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPP 109
+CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV T
Sbjct: 19 NCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKD 78
Query: 110 DQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDL 169
H R+G S + LGE E S+G+ G + ++GEKF D I C +
Sbjct: 79 IDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANF 137
Query: 170 ESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQ 229
ES + + +AKNG+ LG A + KE +FPH+L N V
Sbjct: 138 ESDEVE-LSYAKNGQDLGIAFKIS-------------KEVLAGRPLFPHVLCHNCAVEFN 183
Query: 230 F-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWV 287
F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTTW K
Sbjct: 184 FGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHA 243
Query: 288 KDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNF 347
++P K Y +LGTN I+++M V G ++ + + L+ RA + A+R RNF
Sbjct: 244 AENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNF 302
Query: 348 IIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNML 407
I+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P AV M
Sbjct: 303 ILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMK 362
Query: 408 ANYVLP 413
N+ LP
Sbjct: 363 GNFTLP 368
>gi|71679693|gb|AAI00039.1| Heterogeneous nuclear ribonucleoprotein U [Danio rerio]
Length = 788
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 195/376 (51%), Gaps = 18/376 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+P +CDL F + N +S L E FA+ W+G RA+ G+N GK CF K+ P+
Sbjct: 198 VCLDPYNCDLHFKMSRNRYSASSLTMESFAHLWAGGRASYGVNKGKVCFEMKVTEKTPIK 257
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
++ H +G S + + LGE E S+ + GK + ++GE F D I
Sbjct: 258 HLNSKIMDFHDVHIGWSLANGCLS-LGEEEFSYSYSDKGKKASNCVTEDYGEGFDENDVI 316
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C I+ E+ + I F+KNG N LGV KE + A+FPH+L N
Sbjct: 317 GCFINFEADEV-EISFSKNG-------------NDLGVAFKVNKESLADRALFPHVLCHN 362
Query: 224 VVVVMQFSV-EQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPASGKTT 281
V F E P +++ + + GP KDCEV++MVGLP SGKTT
Sbjct: 363 CTVEFNFGQNETPFFPKLEDFTFMQQIPLEERIRGPKGPVAKKDCEVIVMVGLPGSGKTT 422
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K +++P K Y +L TN +LE++ + + R++ + + R L+ A+
Sbjct: 423 WVVKHAEENPGK-YNILSTNTVLEKLMINSVKRQNKDITKLMAISQRVPFYLGKLIEIAA 481
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R R++I+DQTNV +A++RK+ LF F++ AVVVFP E+LK R+ K+ + GK++P
Sbjct: 482 RKKRHYILDQTNVSSAAQRRKMCLFAGFQRKAVVVFPTDENLKERAQKKAEADGKDIPEH 541
Query: 402 AVNNMLANYVLPVNKD 417
A+ M A Y LP D
Sbjct: 542 ALLKMKALYTLPEQGD 557
>gi|281348111|gb|EFB23695.1| hypothetical protein PANDA_006618 [Ailuropoda melanoleuca]
Length = 810
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 196/373 (52%), Gaps = 19/373 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 283 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 342
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 343 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 401
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES+ + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 402 TCFANFESEEV-ELSYAKNGQDLGIAFKIS-------------KEILAGRPLFPHVLCHN 447
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 448 CAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 507
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 508 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 566
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 567 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 626
Query: 402 AVNNMLA-NYVLP 413
AV M N+ LP
Sbjct: 627 AVLKMKGRNFTLP 639
>gi|449496701|ref|XP_002188099.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Taeniopygia
guttata]
Length = 849
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 192/372 (51%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 311 VCLDTYNCDLHFKISRDRFSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVK 370
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S + LGE E S+G+ G + +FGEKF D I
Sbjct: 371 HLYTKDIDIHEVRVGWSLNTSGM-LLGEEEFSYGYSLKGIKTCNCETEDFGEKFDENDVI 429
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + + + + ++KNG+ LG A + KE +FPH+L N
Sbjct: 430 GCFANFDGDEV-ELSYSKNGQELGVAFKIS-------------KEVLDGRPLFPHVLCHN 475
Query: 224 VVVVMQFSV-EQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKTT 281
V F E+ PV +++ + + V GP K DCEV+MM+GLP +GKTT
Sbjct: 476 CAVEFNFGQKEEPYFPVPEEYTFIQKVPLEDRVRGPKGPEQKKDCEVVMMIGLPGAGKTT 535
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K +P K Y +LGTN I+++M V G R+ + + L+ RA + A+
Sbjct: 536 WVTKHAAANPGK-YNILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAA 594
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 595 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 654
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 655 AVLKMKGNFTLP 666
>gi|358341572|dbj|GAA49212.1| heterogeneous nuclear ribonucleoprotein U-like protein 1
[Clonorchis sinensis]
Length = 1407
Score = 205 bits (521), Expect = 4e-50, Method: Composition-based stats.
Identities = 146/394 (37%), Positives = 214/394 (54%), Gaps = 25/394 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL I+ G + L GF+ W+G RAN G+ GK F K V PV+
Sbjct: 163 VFLDTYNCDLSLMIDAEGYHAKPLTNGGFSMMWAGVRANYGLISGKAFFEVKNVRHLPVE 222
Query: 104 -MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
++ HV RVG S + LGE QSFG+GGTGK S F N+G FG GD
Sbjct: 223 NLDSMSGGAAHVMRVGWSTENSEFA-LGEEPQSFGYGGTGKKSCDNKFSNYGCTFGEGDV 281
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ ++ + A + F+ NG + + + N LG ER A+FPHI +K
Sbjct: 282 VGAFLEWTTNE-AAMRFSVNG--VDQGECYRIPKNTLG-------ERY---ALFPHIYVK 328
Query: 223 NVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNMK-DCEVMMMVG 273
NV + F + IP SW ++ ++ + V G K +CEV+MM+G
Sbjct: 329 NVEFTVNFGQDGQPPWFPPNIPNSDPMSWQLLNNINIASRVHGRMPPASKAECEVLMMMG 388
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP +GKT +A+ D+ E +Y +LGTNLIL++MKV GL R+ NY R+ L+ +A
Sbjct: 389 LPGAGKTYYADHLRADNREMQYNVLGTNLILDKMKVMGLARQRNYHGRWDVLIDQATKCL 448
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ L+S AS R++I+DQTNV+ +A++RK+R F F++ A+V+ P E+ + R +R KE
Sbjct: 449 NQLISIASMRRRHYILDQTNVYPTAQRRKMRPFEGFKRKAIVIVPTDEEFRRRIAQREKE 508
Query: 394 MGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
GKEVP AV M AN+ +P + S +FD+
Sbjct: 509 EGKEVPESAVLEMKANFGIP-KPLSEDSSSVFDE 541
>gi|28302346|gb|AAH46700.1| Hnrnpu protein [Xenopus laevis]
Length = 555
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 193/374 (51%), Gaps = 23/374 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V+L+ +CDL F + + L +S L E FA W+G RA G++ GK CF K+ PV
Sbjct: 159 VLLDTYNCDLHFKVSRDRLSASSLTMESFALLWAGGRATYGVSKGKVCFEMKVTEKIPVK 218
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S LGE E S+G+ G +GEK+ D I
Sbjct: 219 HVYTKETDVHEVRVGWSWSSCGY-MLGEEENSYGYSLKPAKCCNGVAEEYGEKYDENDVI 277
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E + + +AKNG+ LG A + KE E A+FPH+L N
Sbjct: 278 TCCANFEEDEVE-LSYAKNGQDLGVAFKIS-------------KESLSEQALFPHVLCHN 323
Query: 224 VVVVMQF-SVEQGLIPV-EGYK--SWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
V F + + P+ EGY V D + LGP +DCEV+MM+GLP +GK
Sbjct: 324 CAVEFNFGQMAEPFFPIPEGYTLIQNVPLEDRVRAPLGPE--QKQDCEVIMMIGLPGAGK 381
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTW ++++P K Y +LGTN I+E+M V G ++ + + + L+ RA +
Sbjct: 382 TTWVNTHIEENPGK-YNILGTNTIMEKMTV-GCKKQMSDTGKLTALLQRAPQCLSKFIEI 439
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R R+FI+DQTNV +A++RK+ LF F++ AVVV P E K R+ K+ + GK++P
Sbjct: 440 AARKKRHFILDQTNVSVAAQRRKMCLFAGFQRKAVVVCPTDELYKERTQKKSEVEGKDLP 499
Query: 400 ADAVNNMLANYVLP 413
A+ M N+ LP
Sbjct: 500 EHAILKMKGNFTLP 513
>gi|449672488|ref|XP_002162980.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Hydra magnipapillata]
Length = 833
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 197/378 (52%), Gaps = 29/378 (7%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F I NGL L + GF+Y W+GARAN G GK + KI++TQPVD
Sbjct: 226 VALDGYTNDLHFVISGNGLFGHTLVKNGFSYLWAGARANKGAKSGKVGYEVKILATQPVD 285
Query: 104 MEDTPPDQQ--HVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+ P ++ H R+G S + +LGE+ S+GF TGK F N+GE +G GD
Sbjct: 286 L---PANESPIHAVRIGWSSEQSSL-QLGESTHSYGFESTGKVCASSKFFNYGESYGEGD 341
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I +DLES+P T+ + KNGK LG A V KE E +FP + L
Sbjct: 342 VIGTYLDLESEP-KTLKYTKNGKDLGVA------------VSLTKKE---EKPLFPQLFL 385
Query: 222 KNVVVVMQF-SVEQGLI-PVEGYKSWVSALDDGNSVLGPTFCNMKD-CEVMMMVGLPASG 278
+N+ V + F S E+ P++GYK + D L + ++ CEV+MMVGLP +G
Sbjct: 386 RNMKVEINFGSKEESWFGPLDGYKFIQNVPKDNLVSLTYKYPETRESCEVIMMVGLPNAG 445
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
K+ W K+ HPEK Y ++G ILE+ + G RK E + M + +L
Sbjct: 446 KSNWVRKYRDSHPEKLYNVIGVTHILERCLLSGNPRKKT-DEGHEAFMKNVIRVLAMLYK 504
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIR---SVKRFKEMG 395
+T RN+I DQ NV+K A+ K+ F F++ AVVV P ++L+ R S ++
Sbjct: 505 ICPKTKRNYIYDQNNVYKIAQITKMEAFTGFKRKAVVVVPTHDNLRKRTSDSKRKADGYL 564
Query: 396 KEVPADAVNNMLANYVLP 413
+VP + +M N+ +P
Sbjct: 565 HDVPFGDLCDMKCNFHIP 582
>gi|326915425|ref|XP_003204018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like
[Meleagris gallopavo]
Length = 659
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 192/372 (51%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 121 VCLDTYNCDLHFKISRDRFSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVK 180
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S + LGE E S+G+ G + +FGEKF D I
Sbjct: 181 HLYTKDIDIHEVRVGWSLNTSGM-LLGEEEFSYGYSLKGIKTCNCETEDFGEKFDENDVI 239
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + + + + ++KNG+ LG A + KE +FPH+L N
Sbjct: 240 GCFANFDGDEVE-LSYSKNGQELGVAFKIS-------------KEVLDGRPLFPHVLCHN 285
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKTT 281
V F ++ PV +++ + + V GP K DCEV+MM+GLP +GKTT
Sbjct: 286 CAVEFNFGQKDEPYFPVPEEYTFIQKVPLEDRVRGPKGPEQKKDCEVVMMIGLPGAGKTT 345
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K +P K Y +LGTN I+++M V G R+ + + L+ RA + A+
Sbjct: 346 WVTKHAAANPGK-YNILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAA 404
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 405 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 464
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 465 AVLKMKGNFTLP 476
>gi|363731587|ref|XP_419539.3| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Gallus
gallus]
Length = 669
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 193/372 (51%), Gaps = 18/372 (4%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 131 VCLDTYNCDLHFKISRDRFSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVK 190
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S + LGE E S+G+ G + +FGEKF D I
Sbjct: 191 HLYTKDIDIHEVRVGWSLNTSGM-LLGEEEFSYGYSLKGIKTCNCETEDFGEKFDENDVI 249
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + + + + ++KNG+ LG A + V+D +FPH+L N
Sbjct: 250 GCFANFDGDEVE-LSYSKNGQELGVAFKISKE-----VLDG--------RPLFPHVLCHN 295
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKTT 281
V F ++ PV +++ + + V GP K DCEV+MM+GLP +GKTT
Sbjct: 296 CAVEFNFGQKDEPYFPVPEEYTFIQKVPLEDRVRGPKGPEQKKDCEVVMMIGLPGAGKTT 355
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K +P K Y +LGTN I+++M V G R+ + + L+ RA + A+
Sbjct: 356 WVTKHAAANPGK-YNILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAA 414
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 415 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 474
Query: 402 AVNNMLANYVLP 413
AV M N+ LP
Sbjct: 475 AVLKMKGNFTLP 486
>gi|440910301|gb|ELR60110.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1 [Bos
grunniens mutus]
Length = 861
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 180/348 (51%), Gaps = 53/348 (15%)
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D I
Sbjct: 240 LPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVI 297
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C D E + F KNGKW+G A F LG A++PH+L+KN
Sbjct: 298 GCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVKN 344
Query: 224 VVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGP---TFCNMKDCE--------- 267
V F ++P + + + +GP C +++ E
Sbjct: 345 CAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTIGPKSKAECEVRNLEACLGGHLCR 404
Query: 268 ----------------------VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILE 305
++MMVGLPA+GKTTWA K +P K+Y +LGTN I++
Sbjct: 405 ATLLPRQEACLQLSVEERPRFGILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMD 464
Query: 306 QMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRL 365
+M+V GL R+ NY+ R+ L+ +A + L+ A+R RN+I+DQTNV+ SA++RK+R
Sbjct: 465 KMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRP 524
Query: 366 FVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
F F++ A+V+ P EDLK R++KR E GK+VP AV M AN+ LP
Sbjct: 525 FEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLP 572
>gi|218749891|ref|NP_001082474.2| heterogeneous nuclear ribonucleoprotein U [Xenopus laevis]
Length = 797
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 193/374 (51%), Gaps = 23/374 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V+L+ +CDL F + + L +S L E FA W+G RA G++ GK CF K+ PV
Sbjct: 237 VLLDTYNCDLHFKVSRDRLSASSLTMESFALLWAGGRATYGVSKGKVCFEMKVTEKIPVK 296
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S LGE E S+G+ G +GEK+ D I
Sbjct: 297 HVYTKETDVHEVRVGWSWSSCGY-MLGEEENSYGYSLKPAKCCNGVAEEYGEKYDENDVI 355
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E + + +AKNG+ LG A + KE E A+FPH+L N
Sbjct: 356 TCCANFEEDEV-ELSYAKNGQDLGVAFKIS-------------KESLSEQALFPHVLCHN 401
Query: 224 VVVVMQF-SVEQGLIPV-EGYK--SWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
V F + + P+ EGY V D + LGP +DCEV+MM+GLP +GK
Sbjct: 402 CAVEFNFGQMAEPFFPIPEGYTLIQNVPLEDRVRAPLGPE--QKQDCEVIMMIGLPGAGK 459
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTW ++++P K Y +LGTN I+E+M V G ++ + + + L+ RA +
Sbjct: 460 TTWVNTHIEENPGK-YNILGTNTIMEKMTV-GCKKQMSDTGKLTALLQRAPQCLSKFIEI 517
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R R+FI+DQTNV +A++RK+ LF F++ AVVV P E K R+ K+ + GK++P
Sbjct: 518 AARKKRHFILDQTNVSVAAQRRKMCLFAGFQRKAVVVCPTDELYKERTQKKSEVEGKDLP 577
Query: 400 ADAVNNMLANYVLP 413
A+ M N+ LP
Sbjct: 578 EHAILKMKGNFTLP 591
>gi|119597533|gb|EAW77127.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A), isoform CRA_b [Homo sapiens]
Length = 556
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 192/367 (52%), Gaps = 19/367 (5%)
Query: 50 DCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPP 109
+CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV T
Sbjct: 18 NCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKD 77
Query: 110 DQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDL 169
H R+G S + LGE E S+G+ G + ++GEKF D I C +
Sbjct: 78 IDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANF 136
Query: 170 ESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQ 229
ES + + +AKNG+ LG A + KE +FPH+L N V
Sbjct: 137 ESDEVE-LSYAKNGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHNCAVEFN 182
Query: 230 F-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWV 287
F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTTW K
Sbjct: 183 FGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHA 242
Query: 288 KDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNF 347
++P K Y +LGTN I+++M V G ++ + + L+ RA + A+R RNF
Sbjct: 243 AENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNF 301
Query: 348 IIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNML 407
I+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P AV M
Sbjct: 302 ILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMK 361
Query: 408 A-NYVLP 413
N+ LP
Sbjct: 362 GRNFTLP 368
>gi|432089516|gb|ELK23457.1| Heterogeneous nuclear ribonucleoprotein U-like protein 2 [Myotis
davidii]
Length = 602
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 197/383 (51%), Gaps = 41/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + +G L E F WSGAR+ G+ GK CF K+V TQ +
Sbjct: 79 VNLDTYTSDLHFQVSKDGYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVV-TQNLP 137
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
M++ + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 138 MKEGCTEVS-LLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 195
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + KE + A+ PH+L KN
Sbjct: 196 GCFANFETEEVE-LSFSKNGEDLGVAFRIN-------------KESLADRALLPHVLCKN 241
Query: 224 VVVVMQFSVEQGL-------------IPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 242 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 290
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 291 MVGLPGSGKTQWALKYSKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 350
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 351 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPSEEDWKQRLEWR 410
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 411 KEVEGDDVPESIMLEMKANFSLP 433
>gi|126333653|ref|XP_001366727.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Monodelphis domestica]
Length = 621
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 189/378 (50%), Gaps = 24/378 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 123 VSLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPLK 182
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F +G+ FG D I
Sbjct: 183 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEYGQAFGENDVI 238
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + +S+ + + F+KNG + LG+ KE E A+ PH+L KN
Sbjct: 239 GCFANFKSEEVE-LSFSKNG-------------DDLGIAFRVSKESLNERALLPHVLCKN 284
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSAL---DDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
VV + F E+ P ++ A+ D + L P M++CEV++MVGLP SGK
Sbjct: 285 CVVELNFGQKEEPFFPSAEEFVFIHAVPVEDRVRTALPPK--TMEECEVLLMVGLPGSGK 342
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
T WA K +D+PEKRY +LG +L QM++ G + L+ +A+ L+
Sbjct: 343 TQWALKHAQDNPEKRYNVLGAETVLNQMRMKGPEEPEMDPKSRDLLVQQASQCLSKLVQV 402
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
ASRT RN I+DQ NV+ S ++RKL LF F + VV+ P ED K R R + G +VP
Sbjct: 403 ASRTKRNIILDQCNVYNSGQRRKLLLFKTFSRKVVVIVPNEEDWKKRLELRKEVEGDDVP 462
Query: 400 ADAVNNMLANYVLPVNKD 417
+ M AN+ LP D
Sbjct: 463 ETVMLEMKANFSLPEKCD 480
>gi|345783239|ref|XP_533261.3| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 2 [Canis
lupus familiaris]
Length = 748
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 193/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 247 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 306
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 307 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 362
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + KE + A+ PH+L KN
Sbjct: 363 GCFANFETEEI-ELSFSKNGEDLGVAFRIN-------------KESLADRALLPHVLCKN 408
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 409 CVVELNFGQKEEPFFPPPEEFMFIHAVPVE---------ERVRTAIPPK--TIEECEVIL 457
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG ++L QM++ GL + L+ +A+
Sbjct: 458 MVGLPGSGKTQWALKYAKENPEKRYNVLGAEIVLNQMRMKGLEEPEMDPKSRDLLVQQAS 517
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 518 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 577
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 578 KEVEGDDVPESIMLEMKANFSLP 600
>gi|291409526|ref|XP_002721045.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 2
[Oryctolagus cuniculus]
Length = 745
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 191/374 (51%), Gaps = 24/374 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 244 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 303
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 304 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 359
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 360 GCFANFETEEI-ELSFSKNGEDLGVAFRIS-------------KESLADRALLPHVLCKN 405
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSAL---DDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
VV + F E+ P ++ A+ + + + P +++CEV++MVGLP SGK
Sbjct: 406 CVVELNFGQKEEPFFPPPAEFVFIHAVPVEERVRTAVPPK--TIEECEVILMVGLPGSGK 463
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
T WA K+ K++PEKRY +LG +L QM++ G + L+ +A+ L+
Sbjct: 464 TQWALKYAKENPEKRYNVLGAETVLNQMRMKGPEEPEMDPKSRDLLVQQASQCLSKLVQI 523
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R + G +VP
Sbjct: 524 ASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELRKEVEGDDVP 583
Query: 400 ADAVNNMLANYVLP 413
+ M AN+ LP
Sbjct: 584 ESIMLEMKANFSLP 597
>gi|449278128|gb|EMC86095.1| Heterogeneous nuclear ribonucleoprotein U, partial [Columba livia]
Length = 604
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 195/380 (51%), Gaps = 26/380 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 58 VCLDTYNCDLHFKISRDRFSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVK 117
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S + LGE E S+G+ G + +FGEKF D I
Sbjct: 118 HLYTKDIDIHEVRVGWSLNTSGM-LLGEEEFSYGYSLKGIKTCNCETEDFGEKFDENDVI 176
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + + + + ++KNG+ LG A + V+D +FPH+L N
Sbjct: 177 GCFANFDGDEVE-LSYSKNGQELGVAFKISKE-----VLDG--------RPLFPHVLCHN 222
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKTT 281
V F E+ PV +++ + + V GP K DCEV+MM+GLP +GKTT
Sbjct: 223 CAVEFNFGQKEEPYFPVPEEYTFIQKVPLEDRVRGPKGPEQKKDCEVVMMIGLPGAGKTT 282
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K +P K Y +LGTN I+++M V G R+ + + L+ RA + A+
Sbjct: 283 WVTKHAAANPGK-YNILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAA 341
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPAD 401
R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P
Sbjct: 342 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEH 401
Query: 402 AV--------NNMLANYVLP 413
AV N +L N+ LP
Sbjct: 402 AVLKMKGMEHNPILWNFTLP 421
>gi|301779992|ref|XP_002925424.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
2-like, partial [Ailuropoda melanoleuca]
Length = 725
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 224 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 283
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 284 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 339
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + KE E A+ PH+L KN
Sbjct: 340 GCFANFETEEV-ELSFSKNGEDLGVAFRIN-------------KESLAERALLPHVLCKN 385
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 386 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 434
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 435 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 494
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 495 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 554
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 555 KEVEGDDVPESIMLEMKANFSLP 577
>gi|281352570|gb|EFB28154.1| hypothetical protein PANDA_014917 [Ailuropoda melanoleuca]
Length = 716
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 215 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 274
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 275 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 330
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + KE E A+ PH+L KN
Sbjct: 331 GCFANFETEEV-ELSFSKNGEDLGVAFRIN-------------KESLAERALLPHVLCKN 376
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 377 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 425
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 426 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 485
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 486 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 545
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 546 KEVEGDDVPESIMLEMKANFSLP 568
>gi|355694950|gb|AER99842.1| heteroproteinous nuclear ribonucleoprotein U-like 2 [Mustela
putorius furo]
Length = 732
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 231 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 290
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 291 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 346
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + KE E A+ PH+L KN
Sbjct: 347 GCFANFEAEEV-ELSFSKNGEDLGVAFRIN-------------KESLAERALLPHVLCKN 392
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 393 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 441
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 442 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 501
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 502 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 561
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 562 KEVEGDDVPESIMLEMKANFSLP 584
>gi|189441937|gb|AAI67650.1| hnrnpu protein [Xenopus (Silurana) tropicalis]
Length = 784
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 189/374 (50%), Gaps = 23/374 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V+L+ +CDL F I + L +S L E FA W+G RA G+ GK CF K+ PV
Sbjct: 242 VLLDTYNCDLHFKISRDRLSASSLTMESFALLWAGGRATYGVLKGKVCFEMKVTEKIPVK 301
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S LGE E S+G+ G ++GEK+ D I
Sbjct: 302 HVYTKETDVHEVRVGWSLSSCGY-MLGEEENSYGYSLKAAKCCNGVAEDYGEKYDENDVI 360
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E + + +AKNG+ LG A + + K+ E A+FPHIL N
Sbjct: 361 TCCANFEEDEI-ELSYAKNGQDLGVAFKIN-------------KDTILEQALFPHILCHN 406
Query: 224 VVVVMQFS--VEQGLIPVEGYK--SWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
V F E EGY V D + LGP +DCEV+MM+GLP +GK
Sbjct: 407 CAVEFNFGQMAEPFFSIPEGYTLIQNVPLEDRVRAPLGPE--QKQDCEVIMMIGLPGAGK 464
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTW + +P K Y +LGTN I+E+M V G ++ + + + L+ RA +
Sbjct: 465 TTWVTNHTEQNPGK-YNILGTNTIMEKMTV-GCKKQMSDTGKLNALLQRAPQCLSKFIEI 522
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R R+FI+DQTNV +A++RK+ LF F++ AVVV P E K R+ K+ + GK++P
Sbjct: 523 AARKKRHFILDQTNVSVAAQRRKMCLFAGFQRKAVVVCPTDELYKERTQKKSEVEGKDLP 582
Query: 400 ADAVNNMLANYVLP 413
AV M N+ LP
Sbjct: 583 EHAVLKMKGNFTLP 596
>gi|344251493|gb|EGW07597.1| Heterogeneous nuclear ribonucleoprotein U-like protein 2
[Cricetulus griseus]
Length = 627
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F I + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 126 VNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 185
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 186 EGCT---EVSLLRVGWSV-DFSCPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 241
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LGV KE + A+ PH+L KN
Sbjct: 242 GCFANFETEEVE-LSFSKNGE-------------DLGVAFRISKETLADRALLPHVLCKN 287
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
V+ + F ++ ++PVE D + + P +++CEV++
Sbjct: 288 CVIELNFGQKEEPFFPPPEEFVFIHVVPVE---------DRVRTAVPPK--TIEECEVIL 336
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 337 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLSQMRMKGLEEPEMDPKSRDLLVQQAS 396
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASR+ RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 397 QCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 456
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 457 KEVEGDDVPESIMLEMKANFSLP 479
>gi|148701432|gb|EDL33379.1| mCG17844 [Mus musculus]
Length = 758
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F I + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 257 VNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 316
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 317 EGCT---EVSLLRVGWSV-DFSCSQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 372
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 373 GCFANFETEEV-ELSFSKNGEDLGVAFRIS-------------KESLADRALLPHVLCKN 418
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 419 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 467
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ KD+PE+RY +LG +L QM++ GL + L+ +A+
Sbjct: 468 MVGLPGSGKTQWALKYAKDNPERRYNVLGAETVLTQMRMKGLEEPEMDPKSRDLLVQQAS 527
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASR+ RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 528 QCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKRRLELR 587
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 588 KEVEGDDVPESIMLEMKANFSLP 610
>gi|395852468|ref|XP_003798760.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Otolemur garnettii]
Length = 744
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 241 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 300
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 301 EGCT---EVSLLRVGWSI-DFSHPQLGEDEFSYGFDGRGLKAESGQFEEFGQSFGESDVI 356
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + KE + A+ PH+L KN
Sbjct: 357 GCFANFENEEV-ELSFSKNGEDLGVAFRIN-------------KESLADRALLPHVLCKN 402
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE D + + P +++CEV++
Sbjct: 403 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------DRVRTAVPPK--TIEECEVIL 451
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ +++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 452 MVGLPGSGKTQWALKYARENPEKRYNILGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 511
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 512 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFTRKVVVVVPNEEDWKKRLELR 571
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 572 KEVEGDDVPESIMLEMKANFSLP 594
>gi|354504582|ref|XP_003514353.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Cricetulus griseus]
Length = 684
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F I + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 183 VNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 242
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 243 EGCT---EVSLLRVGWSV-DFSCPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 298
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LGV KE + A+ PH+L KN
Sbjct: 299 GCFANFETEEVE-LSFSKNGE-------------DLGVAFRISKETLADRALLPHVLCKN 344
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
V+ + F ++ ++PVE D + + P +++CEV++
Sbjct: 345 CVIELNFGQKEEPFFPPPEEFVFIHVVPVE---------DRVRTAVPPK--TIEECEVIL 393
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 394 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLSQMRMKGLEEPEMDPKSRDLLVQQAS 453
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASR+ RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 454 QCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 513
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 514 KEVEGDDVPESIMLEMKANFSLP 536
>gi|147903785|ref|NP_001090833.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Xenopus (Silurana) tropicalis]
gi|89273407|emb|CAJ83323.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A) [Xenopus (Silurana) tropicalis]
Length = 790
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 189/374 (50%), Gaps = 23/374 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V+L+ +CDL F I + L +S L E FA W+G RA G+ GK CF K+ PV
Sbjct: 248 VLLDTYNCDLHFKISRDRLSASSLTMESFALLWAGGRATYGVLKGKVCFEMKVTEKIPVK 307
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H RVG S LGE E S+G+ G ++GEK+ D I
Sbjct: 308 HVYTKETDVHEVRVGWSLSSCGY-MLGEEENSYGYSLKAAKCCNGVAEDYGEKYDENDVI 366
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E + + +AKNG+ LG A + + K+ E A+FPHIL N
Sbjct: 367 TCCANFEEDEI-ELSYAKNGQDLGVAFKIN-------------KDTILEQALFPHILCHN 412
Query: 224 VVVVMQFS--VEQGLIPVEGYK--SWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
V F E EGY V D + LGP +DCEV+MM+GLP +GK
Sbjct: 413 CAVEFNFGQMAEPFFSIPEGYTLIQNVPLEDRVRAPLGPE--QKQDCEVIMMIGLPGAGK 470
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTW + +P K Y +LGTN I+E+M V G ++ + + + L+ RA +
Sbjct: 471 TTWVTNHTEQNPGK-YNILGTNTIMEKMTV-GCKKQMSDTGKLNALLQRAPQCLSKFIEI 528
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R R+FI+DQTNV +A++RK+ LF F++ AVVV P E K R+ K+ + GK++P
Sbjct: 529 AARKKRHFILDQTNVSVAAQRRKMCLFAGFQRKAVVVCPTDELYKERTQKKSEVEGKDLP 588
Query: 400 ADAVNNMLANYVLP 413
AV M N+ LP
Sbjct: 589 EHAVLKMKGNFTLP 602
>gi|431910362|gb|ELK13435.1| Heterogeneous nuclear ribonucleoprotein U-like protein 2, partial
[Pteropus alecto]
Length = 630
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 129 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 188
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 189 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 244
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + GS + A+ PH+L KN
Sbjct: 245 GCFANFEAEEVE-LSFSKNGEELGVAFRINKGS-------------LADRALLPHVLCKN 290
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 291 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 339
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 340 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 399
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 400 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 459
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 460 KEVEGDDVPESIMLEMKANFSLP 482
>gi|124487099|ref|NP_001074665.1| heterogeneous nuclear ribonucleoprotein U-like protein 2 [Mus
musculus]
gi|408360135|sp|Q00PI9.2|HNRL2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein U-like
protein 2; AltName: Full=MLF1-associated nuclear protein
gi|157169792|gb|AAI52910.1| Heterogeneous nuclear ribonucleoprotein U-like 2 [synthetic
construct]
Length = 745
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F I + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 244 VNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 303
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 304 EGCT---EVSLLRVGWSV-DFSCSQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 359
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 360 GCFANFETEEV-ELSFSKNGEDLGVAFRIS-------------KESLADRALLPHVLCKN 405
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 406 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 454
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ KD+PE+RY +LG +L QM++ GL + L+ +A+
Sbjct: 455 MVGLPGSGKTQWALKYAKDNPERRYNVLGAETVLTQMRMKGLEEPEMDPKSRDLLVQQAS 514
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASR+ RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 515 QCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKRRLELR 574
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 575 KEVEGDDVPESIMLEMKANFSLP 597
>gi|329664552|ref|NP_001193174.1| heterogeneous nuclear ribonucleoprotein U-like protein 2 [Bos
taurus]
gi|296471684|tpg|DAA13799.1| TPA: heterogeneous nuclear ribonucleoprotein U-like [Bos taurus]
Length = 749
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 247 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 306
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 307 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 362
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 363 GCFANFEAEEV-ELSFSKNGEDLGVAFRIS-------------KESLADRALLPHVLCKN 408
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 409 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 457
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLPASGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 458 MVGLPASGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 517
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 518 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 577
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 578 KEVEGDDVPESIMLEMKANFSLP 600
>gi|440898149|gb|ELR49704.1| Heterogeneous nuclear ribonucleoprotein U-like protein 2, partial
[Bos grunniens mutus]
Length = 633
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 131 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 190
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 191 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 246
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LGV KE + A+ PH+L KN
Sbjct: 247 GCFANFEAEEVE-LSFSKNGE-------------DLGVAFRISKESLADRALLPHVLCKN 292
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 293 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 341
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLPASGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 342 MVGLPASGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 401
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 402 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 461
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 462 KEVEGDDVPESIMLEMKANFSLP 484
>gi|344295635|ref|XP_003419517.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein U-like protein 2-like [Loxodonta
africana]
Length = 835
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 333 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 392
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 393 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 448
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + KE + A+ PH+L KN
Sbjct: 449 GCFANFETEEV-ELSFSKNGEDLGVAFRIN-------------KESLADRALLPHVLCKN 494
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 495 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVSPK--TIEECEVIL 543
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ G + L+ +A+
Sbjct: 544 MVGLPGSGKTQWARKYTKENPEKRYNVLGAETVLSQMRMKGPEEPEMDPKSRDLLVQQAS 603
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 604 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPTEEDWKKRLELR 663
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 664 KEVEGDDVPESIMLEMKANFSLP 686
>gi|426251898|ref|XP_004019658.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Ovis aries]
Length = 747
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 247 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 306
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 307 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 362
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 363 GCFANFEAEEV-ELSFSKNGEDLGVAFRIS-------------KESLADRALLPHVLCKN 408
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 409 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 457
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 458 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 517
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 518 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 577
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 578 KEVEGDDVPESIMLEMKANFSLP 600
>gi|332249758|ref|XP_003274025.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Nomascus leucogenys]
Length = 729
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 228 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 287
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 288 EGCT---EVSLLRVGWS-VDFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 343
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 344 GCFANFETEEVE-LSFSKNGEDLGVAFWIN-------------KESLADRALLPHVLCKN 389
Query: 224 VVVVMQFSVEQGL-------------IPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 390 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 438
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 439 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 498
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 499 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 558
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 559 KEVEGDDVPESIMLEMKANFSLP 581
>gi|363746081|ref|XP_001236110.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like, partial [Gallus gallus]
Length = 396
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 166/312 (53%), Gaps = 20/312 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V ++ +CDL F + + L EGFAY WSGARA G G+ C+ K+ + +
Sbjct: 101 VAVDTYNCDLHFKVARDRYSGYPLTIEGFAYLWSGARATYGARQGRVCYEMKV--NEEIS 158
Query: 104 MEDTPPDQQ--HVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
++ P + HV RVG S D +LGE S+G+GGTGK S F N+GE F D
Sbjct: 159 VKHLPASEPDPHVVRVGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNCKFENYGETFAEND 217
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I C +D E + F KNGKWLG A + K+ A+FPH+L+
Sbjct: 218 VIACLVDFECGEEVEMSFMKNGKWLGVAYRVR-------------KDVLAGRALFPHVLV 264
Query: 222 KNVVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGK 279
KN + F E V +++ L V G T K +CE++MMVGLPA+GK
Sbjct: 265 KNCAIEFNFGQREDTYFSVPPGFTFIQHLPVAERVRGTTGPKSKAECEILMMVGLPAAGK 324
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A + L+
Sbjct: 325 TTWAVKHAAANPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQI 384
Query: 340 ASRTPRNFIIDQ 351
A+R RN+I+DQ
Sbjct: 385 AARKKRNYILDQ 396
>gi|402893085|ref|XP_003909734.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Papio anubis]
gi|384941286|gb|AFI34248.1| heterogeneous nuclear ribonucleoprotein U-like protein 2 [Macaca
mulatta]
Length = 747
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 362 GCFANFETEEVE-LSFSKNGEDLGVAFWIN-------------KESLADRALLPHVLCKN 407
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 408 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 456
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 457 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 516
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 517 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 576
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 577 KEVEGDDVPESIMLEMKANFSLP 599
>gi|149062308|gb|EDM12731.1| similar to hypothetical protein (predicted) [Rattus norvegicus]
Length = 758
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 190/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F I + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 257 VNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 316
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 317 EGCT---EVSLLRVGWSI-DFSCSQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 372
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + F+KNG+ LG A F LG + A+ PH+L KN
Sbjct: 373 GCFANFETGEV-ELSFSKNGEDLGVA--FRISKESLG-----------DRALLPHVLCKN 418
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
V+ + F ++ +PVE + + + P +++CEV++
Sbjct: 419 CVIELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 467
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 468 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLTQMRMKGLEEPEMDPKSRDLLVQQAS 527
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASR+ RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 528 QCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 587
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 588 KEVEGDDVPESIMLEMKANFSLP 610
>gi|293344585|ref|XP_001073417.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
2-like [Rattus norvegicus]
gi|293356398|ref|XP_219560.5| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
2-like [Rattus norvegicus]
Length = 745
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 190/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F I + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 244 VNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 303
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 304 EGCT---EVSLLRVGWSI-DFSCSQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 359
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + F+KNG+ LG A F LG + A+ PH+L KN
Sbjct: 360 GCFANFETGEV-ELSFSKNGEDLGVA--FRISKESLG-----------DRALLPHVLCKN 405
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
V+ + F ++ +PVE + + + P +++CEV++
Sbjct: 406 CVIELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 454
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 455 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLTQMRMKGLEEPEMDPKSRDLLVQQAS 514
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASR+ RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 515 QCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 574
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 575 KEVEGDDVPESIMLEMKANFSLP 597
>gi|417404331|gb|JAA48925.1| Putative scaffold/matrix specific factor hnrnp-u/saf-a [Desmodus
rotundus]
Length = 747
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 192/373 (51%), Gaps = 22/373 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + KE + A+ PH+L KN
Sbjct: 362 GCFANFETEEVE-LSFSKNGEDLGVAFRIN-------------KESLADRALLPHVLCKN 407
Query: 224 VVVVMQFSVEQG---LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKT 280
VV + F ++ L P E +++ P +++CEV++MVGLP SGKT
Sbjct: 408 CVVELNFGQKEEPFFLPPEEFVFIHAVPVEERVRTTAPP-KTIEECEVILMVGLPGSGKT 466
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRA 340
WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+ L+ A
Sbjct: 467 QWALKYSKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQASQCLSKLVQIA 526
Query: 341 SRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPA 400
SRT RNFI+DQ NV+ S ++RKL LF F + VVV PK ED K R R + G +VP
Sbjct: 527 SRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPKEEDWKKRLELRKEVEGDDVPE 586
Query: 401 DAVNNMLANYVLP 413
+ M AN+ LP
Sbjct: 587 SIMLEMKANFSLP 599
>gi|380796991|gb|AFE70371.1| heterogeneous nuclear ribonucleoprotein U-like protein 2, partial
[Macaca mulatta]
Length = 664
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 163 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 222
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 223 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 278
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 279 GCFANFETEEVE-LSFSKNGEDLGVAFWIN-------------KESLADRALLPHVLCKN 324
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 325 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 373
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 374 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 433
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 434 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 493
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 494 KEVEGDDVPESIMLEMKANFSLP 516
>gi|109105734|ref|XP_001116183.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
2-like [Macaca mulatta]
Length = 747
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 362 GCFANFETEEVE-LSFSKNGEDLGVAFWIN-------------KESLADRALLPHVLCKN 407
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 408 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 456
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 457 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 516
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 517 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVSPNEEDWKKRLELR 576
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 577 KEVEGDDVPESIMLEMKANFSLP 599
>gi|355566393|gb|EHH22772.1| Scaffold-attachment factor A2, partial [Macaca mulatta]
Length = 675
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 174 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 233
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 234 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 289
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 290 GCFANFETEEVE-LSFSKNGEDLGVAFWIN-------------KESLADRALLPHVLCKN 335
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 336 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 384
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 385 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 444
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 445 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 504
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 505 KEVEGDDVPESIMLEMKANFSLP 527
>gi|90994591|gb|AAY44301.1| MLF1 associated nuclear protein [Mus musculus]
Length = 745
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 190/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F I + L E F W GAR+ G+ GK CF K+ P+
Sbjct: 244 VNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLWFGARSTYGVTKGKVCFEAKVTQNLPMK 303
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 304 EGCT---EVSLLRVGWSV-DFSCSQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 359
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 360 GCFANFETEEV-ELSFSKNGEDLGVAFRIS-------------KESLADRALLPHVLCKN 405
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 406 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 454
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ KD+PE+RY +LG +L QM++ GL + L+ +A+
Sbjct: 455 MVGLPGSGKTQWALKYAKDNPERRYNVLGAETVLTQMRMKGLEEPEMDPKSRDLLVQQAS 514
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASR+ RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 515 QCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKRRLELR 574
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 575 KEVEGDDVPESIMLEMKANFSLP 597
>gi|410974432|ref|XP_003993651.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Felis catus]
Length = 659
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 190/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 171 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 230
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 231 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQSFGENDVI 286
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + + KE E A+ PH+L KN
Sbjct: 287 GCFANFEAEEV-ELSFSKNGEDLGVAFRIN-------------KESLAERALLPHVLCKN 332
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P + CEV++
Sbjct: 333 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIDQCEVIL 381
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG ++ QM++ GL + L+ +A+
Sbjct: 382 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVISQMRMKGLEEPEMDPKSRDLLVQQAS 441
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 442 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFCRKVVVVVPNEEDWKKRLELR 501
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 502 KEVEGDDVPESIMLEMKANFSLP 524
>gi|355752020|gb|EHH56140.1| Scaffold-attachment factor A2, partial [Macaca fascicularis]
Length = 680
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 179 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 238
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 239 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 294
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 295 GCFANFETEEVE-LSFSKNGEDLGVAFWIN-------------KESLADRALLPHVLCKN 340
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 341 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 389
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 390 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 449
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 450 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 509
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 510 KEVEGDDVPESIMLEMKANFSLP 532
>gi|296218531|ref|XP_002755479.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Callithrix jacchus]
Length = 749
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 190/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 248 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 307
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 308 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 363
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG LG A Q + S G + A+ PH+L KN
Sbjct: 364 GCFANFETEEV-ELSFSKNGADLGVAFQINKESLG-------------DRALLPHVLCKN 409
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 410 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 458
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ G + L+ +A+
Sbjct: 459 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGPEEPEMDPKSRDLLVQQAS 518
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 519 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 578
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 579 KEVEGDDVPESIMLEMKANFSLP 601
>gi|118601081|ref|NP_001073027.1| heterogeneous nuclear ribonucleoprotein U-like protein 2 [Homo
sapiens]
gi|121940728|sp|Q1KMD3.1|HNRL2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein U-like
protein 2; AltName: Full=Scaffold-attachment factor A2;
Short=SAF-A2
gi|93209534|gb|ABF00125.1| scaffold attachment factor A2 [Homo sapiens]
gi|119594490|gb|EAW74084.1| hCG20388, isoform CRA_a [Homo sapiens]
gi|189442881|gb|AAI67844.1| Heterogeneous nuclear ribonucleoprotein U-like 2 [synthetic
construct]
Length = 747
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + ++ +R A+ PH+L KN
Sbjct: 362 GCFANFETEEV-ELSFSKNGEDLGVA---------FWISKDSLADR----ALLPHVLCKN 407
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 408 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 456
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 457 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 516
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 517 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 576
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 577 KEVEGDDVPESIMLEMKANFSLP 599
>gi|119594491|gb|EAW74085.1| hCG20388, isoform CRA_b [Homo sapiens]
Length = 629
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 128 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 187
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 188 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 243
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + ++ +R A+ PH+L KN
Sbjct: 244 GCFANFETEEVE-LSFSKNGEDLGVA---------FWISKDSLADR----ALLPHVLCKN 289
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 290 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 338
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 339 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 398
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 399 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 458
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 459 KEVEGDDVPESIMLEMKANFSLP 481
>gi|297688438|ref|XP_002821693.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein U-like protein 2 [Pongo abelii]
Length = 747
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 191/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + K+ + A+ PH+L KN
Sbjct: 362 GCFANFETEEV-ELSFSKNGEDLGVAFWIN-------------KDSLADRALLPHVLCKN 407
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 408 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 456
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 457 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 516
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 517 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 576
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 577 KEVEGDDVPESIMLEMKANFSLP 599
>gi|52545896|emb|CAD39129.2| hypothetical protein [Homo sapiens]
Length = 626
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 125 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 184
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 185 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 240
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + ++ +R A+ PH+L KN
Sbjct: 241 GCFANFETEEVE-LSFSKNGEDLGVA---------FWISKDSLADR----ALLPHVLCKN 286
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 287 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 335
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 336 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 395
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 396 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 455
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 456 KEVEGDDVPESIMLEMKANFSLP 478
>gi|351699180|gb|EHB02099.1| Heterogeneous nuclear ribonucleoprotein U-like protein 2
[Heterocephalus glaber]
Length = 606
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 187/374 (50%), Gaps = 24/374 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ PV
Sbjct: 105 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPVK 164
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + V RVG S D +LGE E S+GF G G + F FG+ FG D I
Sbjct: 165 EGCT---EVSVLRVGWS-VDFSGPQLGEDEFSYGFDGRGLKAQNSQFEEFGQTFGENDVI 220
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KN + LGV K+ + A+ PH+L +N
Sbjct: 221 GCFANFEAEEVE-LSFSKN-------------AEDLGVAFRITKDSLADRALLPHVLCRN 266
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSAL---DDGNSVLGPTFCNMKDCEVMMMVGLPASGK 279
VV + F E+ P G ++ + + + + P ++CEV++MVGLP SGK
Sbjct: 267 CVVELNFGQKEEPFFPPPGEFVFIHTVPVEERVRTAVPPK--TTEECEVILMVGLPGSGK 324
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
T WA K+ K++PEKRY +LG +L QM++ GL E + +A+ L+
Sbjct: 325 TQWALKYAKENPEKRYNILGAETVLSQMRMKGLEEPGMDPESRDLSVQQASQCLSKLVQI 384
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
ASRT RNFI+DQ NV+ S ++RKL LF F + VV+ P ED K R R + G +VP
Sbjct: 385 ASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVIVPNEEDWKKRLELRKEVEGDDVP 444
Query: 400 ADAVNNMLANYVLP 413
+ M AN+ LP
Sbjct: 445 ESIMLEMKANFSLP 458
>gi|332836734|ref|XP_508499.3| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 2 isoform
2 [Pan troglodytes]
gi|410262328|gb|JAA19130.1| heterogeneous nuclear ribonucleoprotein U-like 2 [Pan troglodytes]
gi|410262330|gb|JAA19131.1| heterogeneous nuclear ribonucleoprotein U-like 2 [Pan troglodytes]
gi|410305460|gb|JAA31330.1| heterogeneous nuclear ribonucleoprotein U-like 2 [Pan troglodytes]
Length = 747
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + ++ +R A+ PH+L KN
Sbjct: 362 GCFANFETEEV-ELSFSKNGEDLGVA---------FWISKDSLADR----ALLPHVLCKN 407
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 408 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 456
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 457 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLKEPEMDPKSRDLLVQQAS 516
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 517 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 576
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 577 KEVEGDDVPESIMLEMKANFSLP 599
>gi|119594475|gb|EAW74069.1| hCG2044799 [Homo sapiens]
Length = 746
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + ++ +R A+ PH+L KN
Sbjct: 362 GCFANFETEEV-ELSFSKNGEDLGVA---------FWISKDSLADR----ALLPHVLCKN 407
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 408 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 456
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 457 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 516
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 517 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 576
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 577 KEVEGDDVPESIMLEMKANFSLP 599
>gi|410045238|ref|XP_003951961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 2 isoform
1 [Pan troglodytes]
Length = 747
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + ++ +R A+ PH+L KN
Sbjct: 362 GCFANFETEEV-ELSFSKNGEDLGVA---------FWISKDSLADR----ALLPHVLCKN 407
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 408 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 456
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 457 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLKEPEMDPKSRDLLVQQAS 516
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 517 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 576
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 577 KEVEGDDVPESIMLEMKANFSLP 599
>gi|426368848|ref|XP_004051414.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Gorilla gorilla gorilla]
Length = 748
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 247 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 306
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 307 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 362
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + ++ +R A+ PH+L KN
Sbjct: 363 GCFANFETEEV-ELSFSKNGEDLGVA---------FWISKDSLADR----ALLPHVLCKN 408
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 409 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 457
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 458 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 517
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 518 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 577
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 578 KEVEGDDVPESIMLEMKANFSLP 600
>gi|395544418|ref|XP_003774107.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Sarcophilus harrisii]
Length = 578
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 187/383 (48%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 80 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPLK 139
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F +G+ FG D I
Sbjct: 140 EGCT---EASLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEYGQAFGENDVI 195
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + S+ + + F+KNG + LGV KE E A+ PH+L KN
Sbjct: 196 GCFANFGSEEVE-LSFSKNG-------------DDLGVAFRVSKESLSERALLPHVLCKN 241
Query: 224 VVVVMQFSVEQGL-------------IPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + +VL P ++CEV++
Sbjct: 242 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTVLPPK--TTQECEVLL 290
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ +D+PEKRY +LG +L QM++ G + L+ +A+
Sbjct: 291 MVGLPGSGKTQWALKYAQDNPEKRYNVLGAETVLNQMRMKGPEEPEMDPKSRDLLVQQAS 350
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RN I+DQ NV+ S ++RKL LF F + VV+ P ED K R R
Sbjct: 351 QCLSKLVQVASRTKRNIILDQCNVYNSGQRRKLLLFKTFSRKVVVIVPNEEDWKKRLELR 410
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 411 KEAEGDDVPDTVMLEMKANFSLP 433
>gi|22028256|gb|AAH34925.1| Similar to heterogeneous nuclear ribonucleoprotein U (scaffold
attachment factor A), partial [Homo sapiens]
Length = 520
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 185/354 (52%), Gaps = 18/354 (5%)
Query: 62 LKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSR 121
L +S L E FA+ W+G RA+ G++ GK CF K+ PV T H R+G S
Sbjct: 1 LSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSL 60
Query: 122 GDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAK 181
+ LGE E S+G+ G + ++GEKF D I C + ES + + +AK
Sbjct: 61 TTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVE-LSYAK 118
Query: 182 NGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVE 240
NG+ LG A + KE +FPH+L N V F E+ P+
Sbjct: 119 NGQDLGVAFKIS-------------KEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPIP 165
Query: 241 GYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLG 299
+++ + + V GP KDCEV+MM+GLP +GKTTW K ++P K Y +LG
Sbjct: 166 EEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGK-YNILG 224
Query: 300 TNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSAR 359
TN I+++M V G ++ + + L+ RA + A+R RNFI+DQTNV +A+
Sbjct: 225 TNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQ 284
Query: 360 KRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+RK+ LF F++ AVVV PK ED K R+ K+ + GK++P AV M N+ LP
Sbjct: 285 RRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLP 338
>gi|397517249|ref|XP_003828829.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Pan paniscus]
Length = 735
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 192/383 (50%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 234 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 293
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 294 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 349
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + ++ +R A+ PH+L KN
Sbjct: 350 GCFANFETEEV-ELSFSKNGEDLGVA---------FWISKDSLADR----ALLPHVLCKN 395
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 396 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 444
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 445 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLKEPEMDPKSRDLLVQQAS 504
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 505 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 564
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 565 KEVEGDDVPESIMLEMKANFSLP 587
>gi|335281676|ref|XP_003353867.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 2 [Sus
scrofa]
Length = 747
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 190/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 247 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 306
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 307 EGCT---EVSLLRVGWSV-DFSHPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 362
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 363 GCFANFEAEEV-ELSFSKNGEDLGVAFRIS-------------KESLADRALLPHVLCKN 408
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 409 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 457
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++ EKRY +LG +L QM++ GL + L+ +A+
Sbjct: 458 MVGLPGSGKTQWALKYAKENAEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 517
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 518 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 577
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 578 KEVEGDDVPESIMLEMKANFSLP 600
>gi|350427845|ref|XP_003494900.1| PREDICTED: hypothetical protein LOC100746555 [Bombus impatiens]
Length = 1062
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 198/377 (52%), Gaps = 26/377 (6%)
Query: 44 VVLNPADCDLDFDIEDNG-LKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
++L+ D DL+ I+ +G ++ +H +GF++ W+GARA+ G GK + KIV +
Sbjct: 450 LILSWYDSDLNLVIDKDGYFTATPMHNDGFSHMWAGARASYGFLCGKVYYETKIVEHCTI 509
Query: 103 DM--EDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVG 160
+ E+ P HV R+G S + +LGE + SFG+ TGK + ++G +FG
Sbjct: 510 NSGNEEHP----HVLRIGWSTPYTSM-QLGEEKFSFGYSSTGKKLADNQYEDYGLEFGKD 564
Query: 161 DTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHIL 220
D I C +D S+ + + + NGK GV KE + +FPHIL
Sbjct: 565 DIIGCYLDATSENV-IMSYTVNGK-------------DQGVAFHISKEELNDKPLFPHIL 610
Query: 221 LKNVVVVMQFSVEQGLIP--VEGYKSWVSALDDGNSVLGPTFCNMKD-CEVMMMVGLPAS 277
KN F E ++ Y S + ++ GP KD CEV+MM GLPA
Sbjct: 611 SKNCSFACNFGQETPWTEAILQDYVS-IGNVESQYKTPGPRRPEKKDECEVIMMCGLPAC 669
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLL 337
GK+TWA ++ +HP+K Y +LG + ++ +MK PGL K Y+E ++ L+ + D L
Sbjct: 670 GKSTWATQYAAEHPQKMYNILGLSSLINKMKDPGLSYKEGYNEEWRILIDKCTDALDRLT 729
Query: 338 SRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKE 397
AS RN+I+DQTNV+ S ++RK++ F +++ AVVV P ++ K R+VK KE
Sbjct: 730 EMASSRRRNYILDQTNVYPSVQRRKMKNFCGYQRKAVVVVPSEDEFKSRTVKHKPIDSKE 789
Query: 398 VPADAVNNMLANYVLPV 414
+ + M A++ PV
Sbjct: 790 ISDSMLLEMKASFRAPV 806
>gi|383408803|gb|AFH27615.1| heterogeneous nuclear ribonucleoprotein U-like protein 2 [Macaca
mulatta]
Length = 747
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 190/383 (49%), Gaps = 42/383 (10%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
+ E++ + + F+KNG+ LG A + KE + A+ PH+L KN
Sbjct: 362 GWFANFETEEVE-LSFSKNGEDLGVAFWIN-------------KESLADRALLPHVLCKN 407
Query: 224 VVVVMQFSVEQG-------------LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
VV + F ++ +PVE + + + P +++CEV++
Sbjct: 408 CVVELNFGQKEEPFFPPPEEFVFIHAVPVE---------ERVRTAVPPK--TIEECEVIL 456
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA K+ K++PEKRY +LG +L QM++ GL + L+ +A+
Sbjct: 457 MVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQAS 516
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ ASRT RNFI+DQ NV+ S ++RKL LF F + VVV P ED K R R
Sbjct: 517 QCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLELR 576
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
+ G +VP + M AN+ LP
Sbjct: 577 KEVEGDDVPESIMLEMKANFSLP 599
>gi|326675500|ref|XP_694691.5| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Danio rerio]
Length = 760
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 191/377 (50%), Gaps = 20/377 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F + + +S L E FAY W+G R + G++ GK CF K++ PV
Sbjct: 197 VCLDTYNCDLHFKVSRDRYSASSLTMESFAYLWAGGRGSYGVDKGKACFEMKVIEKIPVK 256
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ + H VG S + LGE S+ F T K + ++GE F D +
Sbjct: 257 HISSKGIEDHDVLVGWSLANSSY-LLGEEAYSYAFSMTAKKTSNAVTEDYGETFDENDVV 315
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C I+ + + I F+KNG+ LG A V +K + +FPH+L N
Sbjct: 316 GCFINFDGAEV-EISFSKNGEDLGKA---------FTVSKDELKGK----PLFPHVLCHN 361
Query: 224 VVVVMQFSVEQG--LIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGKT 280
V F ++ +G+ + + + + + GP N KDCEV+++VGLP SGKT
Sbjct: 362 CAVEFNFGQQESPFFAQPDGF-TLLQQIPVHDRIRGPKGPENKKDCEVIVVVGLPGSGKT 420
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRA 340
W K + +P K Y +LGT+ ILE+M + L R+ + + RA + A
Sbjct: 421 EWVTKHTEANPGK-YNILGTDTILEKMMISTLKRQMKDVTKLLEISLRAPLFLGKFIEIA 479
Query: 341 SRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPA 400
+R RN+I+DQTNV SARKRK+ LF F++ AVVV P E+ K R++K+ + GK+VP
Sbjct: 480 ARKKRNYILDQTNVSASARKRKMCLFAGFQRKAVVVCPTDEEYKKRTLKKAETDGKKVPE 539
Query: 401 DAVNNMLANYVLPVNKD 417
A+ Y LPV D
Sbjct: 540 QAIRKTKRIYSLPVEGD 556
>gi|327289533|ref|XP_003229479.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
2-like [Anolis carolinensis]
Length = 750
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 188/374 (50%), Gaps = 23/374 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V+L+ DL F + L + F WSGAR+ G+ GK CF K+ P+
Sbjct: 240 VILDTYTADLQFRATKDRYGGQPLFHDKFPNLWSGARSTHGVKSGKVCFEAKVTQNLPLK 299
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T P + RVG S D +LGE E S+G+ G G + G F FG+ FG D I
Sbjct: 300 EGSTEP---QLLRVGWS-VDFSCTQLGEDEYSYGYDGRGLKAENGQFEEFGQAFGENDVI 355
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + F+KNG+ LGV S KE + A+ PH+L N
Sbjct: 356 GCFANFESSDV-ELSFSKNGE-------------DLGVAFSISKEVLGDRALLPHVLCIN 401
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKTT 281
VV + F E+ P+ +++ A+ + V P +CEV++MVGLP GKT
Sbjct: 402 CVVELNFGQKEEPFFPIPEDYTFIHAVPVEDRVRTPLPPKTTGECEVLIMVGLPGCGKTH 461
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKV--PGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
WA K ++++P+KR+++LGT ++ QMK P + + R Q L +A L
Sbjct: 462 WARKHIQENPDKRFLILGTETVIHQMKTRGPEPEETPDRAARDQ-LFQQAARCVSKLAQI 520
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A RT RNFI+DQ NV+ S ++RKL F F + +VV P E+ + R +R + G++VP
Sbjct: 521 APRTKRNFILDQCNVYNSGQRRKLHPFKGFIRKVIVVVPSEENWEERLEQREEAEGEDVP 580
Query: 400 ADAVNNMLANYVLP 413
+ M AN+ LP
Sbjct: 581 DSVMLEMKANFSLP 594
>gi|432945679|ref|XP_004083718.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like [Oryzias
latipes]
Length = 785
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 188/375 (50%), Gaps = 22/375 (5%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
+V L+ +CDL F + + +S L E FAY WSG +AN G+N GK CF KI PV
Sbjct: 195 KVCLDTYNCDLHFKVSRDRYSASSLTMESFAYLWSGGKANYGVNKGKACFEMKITEKIPV 254
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ + H +VG S + LGE E S+ + G K + +FGE F D
Sbjct: 255 KHITSKNMEIHDVQVGWSLVTGSL-LLGEEEFSYAYSGKAKKTTNCVTEDFGEAFDENDV 313
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGS-NGLGVVDSAVKERQCESAVFPHILL 221
+ C ID E + + F+KNG A S NG A+FPH++
Sbjct: 314 VCCLIDFEGDEV-VLSFSKNGGEPSVAFHVKKDSLNG--------------QALFPHVMC 358
Query: 222 KNVVVVMQF-SVEQGLIPV-EGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASG 278
N V F +E P EGY +++ + + V G K DCE+++MVGLP SG
Sbjct: 359 HNCAVEFNFGQMETPYFPEPEGY-TFLQKIPISDRVRGLKGPQTKADCEIIVMVGLPGSG 417
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLS 338
KTTW + V+++P K YIL G++ I+++M + L R+ + + RA +
Sbjct: 418 KTTWVKNHVQENPGKYYIL-GSDTIVDKMMINSLKRQSKDITKLTAISQRAPLFLGKFIE 476
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
A+R RN+I+D TN+ +KRK+ LF F++ AVVV P E+ K R K+ + GKEV
Sbjct: 477 IAARKKRNYILDHTNLSAPGQKRKMCLFAGFQRKAVVVCPTEEEYKQRVQKKVESDGKEV 536
Query: 399 PADAVNNMLANYVLP 413
P A+ M Y LP
Sbjct: 537 PEHALLKMKGFYALP 551
>gi|33187705|gb|AAP97707.1|AF461014_1 unknown [Homo sapiens]
gi|119597532|gb|EAW77126.1| heterogeneous nuclear ribonucleoprotein U (scaffold attachment
factor A), isoform CRA_a [Homo sapiens]
Length = 513
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 180/346 (52%), Gaps = 18/346 (5%)
Query: 70 EGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKL 129
E FA+ W+G RA+ G++ GK CF K+ PV T H R+G S + L
Sbjct: 2 ESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGM-LL 60
Query: 130 GETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
GE E S+G+ G + ++GEKF D I C + ES + + +AKNG+
Sbjct: 61 GEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVE-LSYAKNGQ----- 114
Query: 190 KQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVEGYKSWVSA 248
LGV KE +FPH+L N V F E+ P+ +++
Sbjct: 115 --------DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEEYTFIQN 166
Query: 249 LDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQM 307
+ + V GP KDCEV+MM+GLP +GKTTW K ++P K Y +LGTN I+++M
Sbjct: 167 VPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGK-YNILGTNTIMDKM 225
Query: 308 KVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFV 367
V G ++ + + L+ RA + A+R RNFI+DQTNV +A++RK+ LF
Sbjct: 226 MVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFA 285
Query: 368 NFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
F++ AVVV PK ED K R+ K+ + GK++P AV M N+ LP
Sbjct: 286 GFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLP 331
>gi|344244706|gb|EGW00810.1| Heterogeneous nuclear ribonucleoprotein U [Cricetulus griseus]
Length = 512
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 181/346 (52%), Gaps = 18/346 (5%)
Query: 70 EGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKL 129
E FA+ W+G RA+ G++ GK CF K+ PV T H R+G S + L
Sbjct: 2 ESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGM-LL 60
Query: 130 GETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
GE E S+G+ G + ++GEKF D I C + E+ + + +AKNG+
Sbjct: 61 GEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFETDEVE-LSYAKNGQ----- 114
Query: 190 KQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVEGYKSWVSA 248
LGV KE + +FPH+L N V F E+ P+ +++
Sbjct: 115 --------DLGVAFKISKEVLADRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEDYTFIQN 166
Query: 249 LDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQM 307
+ + V GP KDCEV+MM+GLP +GKTTW K ++P K Y +LGTN I+++M
Sbjct: 167 VPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGK-YNILGTNTIMDKM 225
Query: 308 KVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFV 367
V G ++ + + L+ RA + A+R RNFI+DQTNV +A++RK+ LF
Sbjct: 226 MVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFA 285
Query: 368 NFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
F++ AVVV PK ED K R+ K+ + GK++P AV M N+ LP
Sbjct: 286 GFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLP 331
>gi|189527741|ref|XP_697747.3| PREDICTED: si:ch211-107m4.1 [Danio rerio]
Length = 662
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 184/375 (49%), Gaps = 24/375 (6%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVS--TQP 101
V L+ + DL F+++ NG L E F WSG R G GK F K V + P
Sbjct: 242 VRLDSYNGDLHFEVDSNGSSGQPLFWEKFPLLWSGCRMTHGYCQGKVGFEAKFVKRLSAP 301
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+ PD HV RVG S D +LGE E S+GF G G GG +FGE F GD
Sbjct: 302 ALNTNNAPDL-HVLRVGWSV-DSSSLQLGEVELSYGFDGRGSIVTGGKEESFGEPFTEGD 359
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I C ++ AT+ F KNG+ LG A F S+ LG A++PH+L
Sbjct: 360 VIGCYAHIDETGEATLSFHKNGRSLGVA--FHLNSSVLG-----------GQALYPHVLC 406
Query: 222 KNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKT 280
KN V + + P S +S L G P K DCEV+MMVG+P SGKT
Sbjct: 407 KNCSVSVNLDPDAPWYPFPAGFSALSTLPPGQRTRAPLPAASKSDCEVLMMVGMPGSGKT 466
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRA 340
WA+ + +P KRY LL TN IL M+ P N+ E ++ +A L+ A
Sbjct: 467 HWAQAHILQNPSKRYDLLSTNSILNCMREPT---GANHRE---LMLQQATQCVSQLIKIA 520
Query: 341 SRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPA 400
+ RN+I+DQ N++ SA++ K+ F +++ AVVVFP E + R V+R ++ G V
Sbjct: 521 AAKKRNYILDQANIYPSAQRHKMLCFHGYQRKAVVVFPPDEVWRSRLVQRQEQEGIAVQE 580
Query: 401 DAVNNMLANYVLPVN 415
++ ++ +PV
Sbjct: 581 TSLLKAKVSFTVPVQ 595
>gi|348506418|ref|XP_003440756.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like
[Oreochromis niloticus]
Length = 791
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/376 (33%), Positives = 186/376 (49%), Gaps = 24/376 (6%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
+V L+ + DL F + + +S L E FAY WSG +A G+N GK CF KI PV
Sbjct: 202 KVCLDSYNSDLHFKVSRDRYSASSLTMESFAYLWSGGKATYGVNKGKACFEMKITEKIPV 261
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ + H +VG S + LGE E S+ + G K + FGE + D
Sbjct: 262 KHISSKNMEIHDVQVGWSLETGTL-LLGEEEHSYAYSGKAKKTTNCVTEEFGEPYEENDV 320
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGS-NGLGVVDSAVKERQCESAVFPHILL 221
I C ID E + + + ++KNG A Q S NG A+FPH++
Sbjct: 321 ICCLIDFEGEEV-VLSYSKNGGEPAVAFQVSKDSLNG--------------QALFPHVIC 365
Query: 222 KNVVVVMQF-SVEQGLIPV-EGYK--SWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPAS 277
+N V F +E P +GY + D ++ GP DCE+++MVGLP S
Sbjct: 366 RNCAVEFNFGQLETPYFPQPQGYTFLQQIPVSDRVRALKGPQ--TKADCEIIVMVGLPGS 423
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLL 337
GKTTW K ++++P K YIL G++ I+E+M + + R+ + + RA +
Sbjct: 424 GKTTWVNKHIQENPGKYYIL-GSDTIVEKMMIGSMKRQSKDITKLTAISQRAPLFLGKFI 482
Query: 338 SRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKE 397
A+R RN+I+D TN+ +KRK+ LF F++ AVVV P ED K R K+ + GKE
Sbjct: 483 EIAARKKRNYILDHTNLSAPGQKRKMCLFAGFQRKAVVVCPSDEDYKQRVQKKVETDGKE 542
Query: 398 VPADAVNNMLANYVLP 413
VP A+ M + LP
Sbjct: 543 VPEHALLKMKGFFSLP 558
>gi|403288344|ref|XP_003935366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Saimiri
boliviensis boliviensis]
Length = 513
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 180/346 (52%), Gaps = 18/346 (5%)
Query: 70 EGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKL 129
E FA+ W+G RA+ G++ GK CF K+ PV T H R+G S + L
Sbjct: 2 ESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGM-LL 60
Query: 130 GETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
GE E S+G+ G + ++GEKF D I C + ES + + +AKNG+ LG A
Sbjct: 61 GEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVE-LSYAKNGQDLGIA 119
Query: 190 KQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVEGYKSWVSA 248
+ KE +FPH+L N V F E+ P+ + +
Sbjct: 120 FKIS-------------KEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEEYTLIQN 166
Query: 249 LDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQM 307
+ + V GP KDCEV+MM+GLP +GKTTW K ++P K Y +LGTN I+++M
Sbjct: 167 VPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGK-YNILGTNTIMDKM 225
Query: 308 KVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFV 367
V G ++ + + L+ RA + A+R RNFI+DQTNV +A++RK+ LF
Sbjct: 226 MVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFA 285
Query: 368 NFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
F++ AVVV PK ED K R+ K+ + GK++P AV M N+ LP
Sbjct: 286 GFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLP 331
>gi|313235803|emb|CBY19787.1| unnamed protein product [Oikopleura dioica]
Length = 760
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 197/399 (49%), Gaps = 29/399 (7%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKI 96
P RV ++P DL+ I ++ + L+ EG YC++GA+A G+ GGK CF I
Sbjct: 226 PSWDDSRVQISPYMADLNLKITESN-RCENLNYEGLGYCYAGAKATHGVRGGKVCFELHI 284
Query: 97 VSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFG 154
P + PD++ + CRVG S G + LGE + S GF K ++ F+ +G
Sbjct: 285 SREMPT--KHLHPDEKSLYWCRVGWSTGMSDLN-LGEDQGSIGFDSHAKLAYNKKFMEYG 341
Query: 155 EKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQC--E 212
F GDTI C +DL L T+ + +NGK T +G V +E C +
Sbjct: 342 STFRRGDTIGCFLDLTDPKLITVAYTRNGKQQLT-------DDGAETVTYNREELGCAEQ 394
Query: 213 SAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDD---------GNSVLGPTFC-N 262
SA +PH L+KN V M F + ++S AL D + GP +
Sbjct: 395 SAFYPHFLIKNYSVHMHFGRRSSTY-NDMWESSPKALRDYTLIGAVPVEERIAGPKESED 453
Query: 263 MKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRK---HNYS 319
++C V+MM GLP+SGKTTW +K++ D+ K + ++G I+++M + G R+ + Y
Sbjct: 454 KRNCSVIMMCGLPSSGKTTWVDKFMNDNRAKHFHMIGNESIMDKMSICGEKREKYSNKYG 513
Query: 320 ERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK 379
F+ L + ++ RA+R RN+I+DQ N++++ +K+ F F + +VV P
Sbjct: 514 TPFEELQSKVMGSVLRIMERANRKKRNYILDQANIYRNGHVKKMGPFEGFHRRCIVVVPS 573
Query: 380 PEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDT 418
E+ + R K+ E G+++ + + A LP D
Sbjct: 574 DEEYERRKQKKQSEGGRKITNENMMKWKAAMSLPEKDDN 612
>gi|345486414|ref|XP_001606922.2| PREDICTED: hypothetical protein LOC100123298 [Nasonia vitripennis]
Length = 1183
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 206/392 (52%), Gaps = 37/392 (9%)
Query: 44 VVLNPADCDLDFDIE-DNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKI------ 96
V+L+ D DL+ I N +S + +GF + W+GAR + G N G+ + +I
Sbjct: 482 VLLSWYDSDLNLVINPTNYFSASPMQGDGFNFMWAGARVSHGFNKGRVYYEARIDSEFNN 541
Query: 97 --VSTQPVDMEDT---PPDQQHV---CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGG 148
+ Q +++ P D++ + R+G S + +LGE + S+GF GT K S
Sbjct: 542 IAAAAQTAHRDNSGALPADEEKIPALLRLGWSTIPTSL-QLGEEKLSYGFEGTAKKSTNK 600
Query: 149 NFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKE 208
F +G+ FG D + C D E+ T+ + NG+ G+A F +K+
Sbjct: 601 EFTEYGKTFGKSDVVGCYADFETDGNVTLSYTVNGEDQGSA--F------------VLKK 646
Query: 209 RQCE-SAVFPHILLKNVVVVMQFSVEQGLIP--VEGYKSWVSALDDGNSVLGPTFCNMK- 264
+ E A+FPH+L KN + E+ +EGY+S V +D + V+GP +
Sbjct: 647 EELEGKALFPHVLSKNCTFTVNLGQEEPWSKDVLEGYQS-VGKVDLNDRVVGPRRSEKRG 705
Query: 265 DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQC 324
DCEV+++ GLP SGKT+WA K V +HPEK Y +LGT+ ++E+M V GL K ++ R++
Sbjct: 706 DCEVILLCGLPFSGKTSWALKHVAEHPEKMYSVLGTHSLIERMNVDGLPLKDSFKGRWEN 765
Query: 325 LMGRANAIFDVLLSRASRTPRNFIID-QTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDL 383
++ + + LL A RN+I+D Q NV+ SA+KRK+R F F + AV++ P E+
Sbjct: 766 VVEKCSRALIKLLDSAPSRRRNYILDQQANVYGSAQKRKMRNFYGFHRKAVILVPSDEEF 825
Query: 384 KIRSVKRFKEM-GKEVPADAVNNMLANYVLPV 414
K R KR + G+E+ ++ + AN P
Sbjct: 826 KSRMAKRKEAADGEEIRESSILEVKANINAPT 857
>gi|410916121|ref|XP_003971535.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like [Takifugu
rubripes]
Length = 807
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 186/374 (49%), Gaps = 20/374 (5%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
+V L+ +CDL F + + +S L E FAY WSG +A G++ GK CF KI PV
Sbjct: 212 KVCLDAYNCDLHFKVSRDRYSASSLTMESFAYLWSGGKATYGVDKGKACFEMKITEKIPV 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ H +VG S + LGE E SFG+ GK + FGE F D
Sbjct: 272 KHISSKNMDIHDVQVGWSLATGTL-LLGEEELSFGYSSKGKKTSNCVTEEFGETFEENDV 330
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C ID + + + + KNG TA Q K+ A+FPHI+
Sbjct: 331 ICCLIDFDGDEV-VMSYCKNGGEPSTAFQIS-------------KDSLSGQALFPHIICH 376
Query: 223 NVVVVMQF-SVEQGLIPV-EGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGK 279
N V F +E P EG+ +++ + + V GP K DCE+++MVGLP SGK
Sbjct: 377 NCAVEFNFGQMETPYFPQPEGF-TFLQQIPVDDRVRGPRGPQTKADCEIIVMVGLPGSGK 435
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTW + V+++P K YIL ++ I+++M + L R+ + + RA +
Sbjct: 436 TTWVKNHVQENPGKYYIL-SSDTIVDKMMINSLKRQSKDITKLTTISQRAPLFLGKFIEI 494
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R RN+I+D TNV +KRK+ LF F++ AVVV P ED K R ++ + GKEVP
Sbjct: 495 AARKKRNYILDHTNVSAPGQKRKMCLFAGFQRKAVVVCPSEEDYKQRVQQKVETDGKEVP 554
Query: 400 ADAVNNMLANYVLP 413
A+ M Y LP
Sbjct: 555 EHAILKMKGFYALP 568
>gi|74189661|dbj|BAE36825.1| unnamed protein product [Mus musculus]
Length = 533
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 174/337 (51%), Gaps = 18/337 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G++ GK CF K+ PV
Sbjct: 213 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR 272
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E +G+ G + ++GEKF D I
Sbjct: 273 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFPYGYSLKGIKTCNCETEDYGEKFDENDVI 331
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + E+ + + +AKNG+ LG A + KE + +FPH+L N
Sbjct: 332 TCFANFETDEV-ELSYAKNGQDLGVAFKIS-------------KEVLADRPLFPHVLCHN 377
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTT 281
V F E+ P+ +++ + + V GP KDCEV+MM+GLP +GKTT
Sbjct: 378 CAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTT 437
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
W K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+
Sbjct: 438 WVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAA 496
Query: 342 RTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFP 378
R RNFI+DQTNV +A++RK+ LF F++ AVVV P
Sbjct: 497 RKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCP 533
>gi|332021877|gb|EGI62213.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1
[Acromyrmex echinatior]
Length = 1011
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 193/390 (49%), Gaps = 22/390 (5%)
Query: 28 PVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNG-LKSSGLHQEGFAYCWSGARANVGIN 86
PV S P + V+L+ D DL+ I +G L + +H W+GARA+ G++
Sbjct: 369 PVPQKSEDEPDLDESTVILSWYDSDLNLVINKDGFLSGTPMHDGDLCDMWAGARASHGVS 428
Query: 87 GGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSH 146
GK + +IV P +D Q H+ R+G S + +LGE + S+ + GK
Sbjct: 429 NGKVYYEARIVQHYPTTTKDKK--QSHMLRIGWSVPSTSM-QLGEEKLSYAYTSAGKQGT 485
Query: 147 GGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAV 206
F ++G FG D + C +D+ + + + NGK +G+A F S
Sbjct: 486 DKKFTDYGSPFGKDDVVGCYLDMTPENTIELFYTVNGKNVGSA--F-----------SIC 532
Query: 207 KERQCESAVFPHILLKNVVVVMQFSVEQGLIP-VEGYKSWVSALDDGNSVLGPTFCNMK- 264
KE + +FPHIL KN V F E+ + GY V + N V GP N K
Sbjct: 533 KEELGDRPLFPHILSKNCTFVCNFGQEEAWCEQIPGY-ILVGNAESKNRVAGPRRPNGKA 591
Query: 265 DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQC 324
DCEV+MM GLP +GKTTWA K DHP+K Y +L + ++E+ LL K + +
Sbjct: 592 DCEVIMMCGLPTAGKTTWARKHAADHPDKLYNILAVHKLVEKTGDVALLDKEQNICQREI 651
Query: 325 LMGRANAIFDVLLSRASRTPRNFIIDQ-TNVFKSARKRKLRLFVNFRKIAVVVFPKPEDL 383
++ R N D L++ AS RN+I+DQ +N++ S ++RK+R F +++ A+VV P ++
Sbjct: 652 IIDRCNRALDQLINVASDRRRNYILDQKSNIYSSVQRRKMRNFCGYQRKAIVVIPTDKEY 711
Query: 384 KIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
R G + ++ + M AN+ P
Sbjct: 712 NQRLSMHNTIEGNSLVSN-LTEMKANFTAP 740
>gi|74150698|dbj|BAE25486.1| unnamed protein product [Mus musculus]
Length = 486
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 154/291 (52%), Gaps = 22/291 (7%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 330 IGCFADFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 376
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASG 278
N V F ++P + + + +GP + +CE++MMVGLPA+G
Sbjct: 377 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTIGPK--SKAECEILMMVGLPAAG 434
Query: 279 KTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRA 329
KTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A
Sbjct: 435 KTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQA 485
>gi|119577432|gb|EAW57028.1| heterogeneous nuclear ribonucleoprotein U-like 1, isoform CRA_c
[Homo sapiens]
Length = 752
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 149/263 (56%), Gaps = 21/263 (7%)
Query: 157 FGVGDTIIC--AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESA 214
+GV +C D E + F KNGKW+G A F LG A
Sbjct: 207 YGVRRGRVCFEMKDFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QA 253
Query: 215 VFPHILLKNVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
++PH+L+KN V F ++P + + + +GP + +CE++M
Sbjct: 254 LYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILM 311
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLPA+GKTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A
Sbjct: 312 MVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQAT 371
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
+ L+ A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR
Sbjct: 372 QCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKR 431
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
E GK+VP AV M AN+ LP
Sbjct: 432 TDEEGKDVPDHAVLEMKANFTLP 454
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCK 95
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF K
Sbjct: 168 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMK 219
>gi|3822553|gb|AAC69888.1| nuclear calmodulin-binding protein [Gallus gallus]
Length = 757
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 182/404 (45%), Gaps = 51/404 (12%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V+L+ DL F + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 227 VILDTYTSDLHFRATKDRYGGQPLFFERFPALWSGARSTHGVTAGKVCFEAKVAQHLPLK 286
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+G+ G G G F FG+ FG GD I
Sbjct: 287 EGST---EVPLFRVGWSV-DFSRSQLGEDEFSYGYDGRGLKVESGRFEEFGQPFGEGDVI 342
Query: 164 ICAIDLE-SKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
C D E S+ + F+KNG+ LG A F LG A+ PH+L K
Sbjct: 343 GCFADFEASEEEVELSFSKNGEALGVA--FRVPKEALGG-----------RALLPHVLCK 389
Query: 223 NVVVVMQFSVEQGLIPVE--GYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKT 280
V + F + L P GY S + P +++ CEV++MVGLP SGKT
Sbjct: 390 GCAVQLNFGQTEPLCPPAPPGYVFIHSVPPEQRVRTPPAPAHLQQCEVLLMVGLPGSGKT 449
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRA 340
WA+K ++ EKRY ++GT L+L QM+ G + ++ L+ +A L+ A
Sbjct: 450 QWAQKHSAENQEKRYNMVGTELVLHQMRTRGPEVEELDAKSKDLLIQQAAQCLSKLVQIA 509
Query: 341 SRTPRNFIIDQT-------------------------------NVFKSARKRKLRLFVNF 369
R RNFI+DQ NV+ S ++RKL F F
Sbjct: 510 PRAKRNFILDQVPPGGVSQTLLGRPPMSLFNFFPPFPPRFGQCNVYNSGQRRKLLAFKGF 569
Query: 370 RKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ VVV P +D K R R + G++VP + M ANY LP
Sbjct: 570 CRKVVVVVPTEDDWKKRLELRKEAEGEDVPESVMLEMKANYSLP 613
>gi|34533795|dbj|BAC86806.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 149/263 (56%), Gaps = 21/263 (7%)
Query: 157 FGVGDTIIC--AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESA 214
+GV +C D E + F KNGKW+G A F LG A
Sbjct: 207 YGVRRGRVCFEMKDFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QA 253
Query: 215 VFPHILLKNVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMM 270
++PH+L+KN V F ++P + + + +GP + +CE++M
Sbjct: 254 LYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEILM 311
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLPA+GKTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A
Sbjct: 312 MVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQAT 371
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
+ L+ A+R RN+I+DQT+V+ SA++RK+R F F++ A+V+ P EDLK R++KR
Sbjct: 372 QCLNRLIQIAARKKRNYILDQTSVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKR 431
Query: 391 FKEMGKEVPADAVNNMLANYVLP 413
E GK+VP AV M AN+ LP
Sbjct: 432 TDEEGKDVPDHAVLEMKANFTLP 454
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCK 95
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF K
Sbjct: 168 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMK 219
>gi|307194683|gb|EFN76942.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1
[Harpegnathos saltator]
Length = 1091
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 185/373 (49%), Gaps = 21/373 (5%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
V+L+ D DL+ I NG S+ +H + + W+G+RA+ G GK + KI
Sbjct: 428 VILSYYDSDLNLIINKNGFYSATPMHNDDLCHMWAGSRASYGFTSGKVYYEAKITENCLS 487
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+D ++ H+ R+G S + +LGE S+ + TGK F ++G FG D
Sbjct: 488 ASQDK--EKLHMFRIGWSTLGTSM-QLGEERFSYAYTSTGKKGTNKEFTDYGPHFGKDDV 544
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ C +DL ++ + + NGK LG A F LG E +FPHIL K
Sbjct: 545 VGCYLDLTAEDAVELSYTLNGKELGPA--FSISKEELG-----------ERPLFPHILSK 591
Query: 223 NVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKTT 281
N V F E + V ++ + V GP + + DCEV+MM GLPA GKT
Sbjct: 592 NCAFVCNFGQEDAWCEQIPDYAAVGNVELKDRVAGPRRPDGRADCEVIMMCGLPAVGKTA 651
Query: 282 WAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRAS 341
WA K +HP+K+Y +LG + ++E+ L ++ N R + ++ + N D LL A
Sbjct: 652 WARKHAAEHPDKQYNILGIDNLVEKTGDAALCQEQNQPRR-EVIIDKCNRALDGLLDMAG 710
Query: 342 RTPRNFIIDQ-TNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPA 400
RN+I+DQ +N++ S ++RK+R F +++ AVVV P E+ + + ++ K V
Sbjct: 711 GRRRNYILDQRSNMYSSVQRRKMRYFSGYQRKAVVVMPADEEEYSQRLS-TQDARKSVSD 769
Query: 401 DAVNNMLANYVLP 413
+ M AN+ P
Sbjct: 770 SNLMEMKANFTAP 782
>gi|350585252|ref|XP_003355981.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
[Sus scrofa]
Length = 836
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 180/377 (47%), Gaps = 49/377 (12%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 214 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 273
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 274 HLPSTEPDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 331
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
I C +D E + F KNGKW+G A F LG A++PH+L+K
Sbjct: 332 IGCFVDFECGNDVELSFTKNGKWMGIA--FRIQKEALGG-----------QALYPHVLVK 378
Query: 223 NVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPA-- 276
N V F ++P + + + +GP + +CEV L
Sbjct: 379 NCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEVSGPGSLNCGN 436
Query: 277 SGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVL 336
SGK +++++ + + L + + P L+K VL
Sbjct: 437 SGKALLVSEFLEE-------VYSSTLPAKAICKPKWLQKL------------------VL 471
Query: 337 LSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGK 396
RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++KR E GK
Sbjct: 472 XXXXXXXXRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGK 531
Query: 397 EVPADAVNNMLANYVLP 413
+VP AV M AN+ LP
Sbjct: 532 DVPDHAVLEMKANFTLP 548
>gi|47222706|emb|CAG00140.1| unnamed protein product [Tetraodon nigroviridis]
Length = 845
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 184/381 (48%), Gaps = 21/381 (5%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
+V L+ +CDL F + + +S L E FAY WSG +A G+N GK CF KI PV
Sbjct: 263 KVCLDAYNCDLHFKVSRDRYSASSLTMESFAYLWSGGKATYGVNKGKACFEMKITEKIPV 322
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
H +VG S + LGE E SF + GK + FGE F D
Sbjct: 323 KHISNKNTDIHDVQVGWSLATGTL-LLGEEEFSFAYSSKGKKTTKCVTEEFGETFEENDV 381
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ C ID + + + + KNG TA F +GL A+FPHI+
Sbjct: 382 VCCLIDCDGDEV-VMSYCKNGGEPATA--FRISKDGLD-----------GQALFPHIICH 427
Query: 223 NVVVVMQF-SVEQGLIPV-EGYKSWVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGK 279
N V F +E P EG+ +++ + + V GP K DCE+++MVGLP SGK
Sbjct: 428 NCAVEFNFGQMETPYFPQPEGF-TFLQQIPVDDRVRGPRGPQTKADCEIIVMVGLPGSGK 486
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
TTW + V++HP K YI L ++ I+++M + L R+ + + RA +
Sbjct: 487 TTWVKNHVQEHPGKYYI-LSSDTIVDKMMINSLKRQSKDITKLTTISQRAPLFLGKFIEI 545
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+R RN+I+D S R R + LF F++ AVVV P ED K R ++ + GKEVP
Sbjct: 546 AARKKRNYILDHVGGGCSGRGR-VCLFAGFQRKAVVVCPSEEDYKQRVQQKVETDGKEVP 604
Query: 400 ADAVNNMLANYVLPVNKDTPG 420
A+ M Y LP D+ G
Sbjct: 605 EHAILKMKGFYALPEEGDSFG 625
>gi|307167951|gb|EFN61317.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1
[Camponotus floridanus]
Length = 1049
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 195/402 (48%), Gaps = 37/402 (9%)
Query: 22 KAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNG-LKSSGLHQEGFAYCWSGAR 80
+A+ PVS P + ++L+ D DL+ I G L ++ +H F + W+GAR
Sbjct: 402 EAQQTSPVSQKGEDEPDFDESAMILSWYDSDLNLIINKEGFLSATPMHNGDFCHIWAGAR 461
Query: 81 ANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGG 140
A+ G GK + KI S+ D+++V R+G S + +LGE S+ +
Sbjct: 462 ASHGFINGKVYYEAKITSS-------VTKDEKYVLRIGWSVPFTSM-QLGEERLSYAYTS 513
Query: 141 TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLG 200
G+ F ++G +F D + C +D+ + + + NGK LG+A F LG
Sbjct: 514 AGQKGTDKKFTDYGSRFDKDDVVGCYLDMTPENTVELFYTVNGKDLGSA--FSISKEELG 571
Query: 201 VVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGY------KSWVSALDDGNS 254
+ +FPHIL KN V F EQ EG+ + V ++ +
Sbjct: 572 -----------DRPLFPHILSKNCTFVCNFGQEQ-----EGWCEQIPDYTLVGNVESKDR 615
Query: 255 VLGPTFCNMK-DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLL 313
+ GP ++K +CEV+MM GLPA+GKTTWA K +HP+K Y +L ++E+ L
Sbjct: 616 IAGPRRPDVKAECEVIMMCGLPAAGKTTWARKHATEHPDKLYNILALRNLIEKTGDIALS 675
Query: 314 RKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQ-TNVFKSARKRKLRLFVNFRKI 372
+ R + ++ + N D L+ A+ RN+I+DQ +NV+ S ++RK+R F +++
Sbjct: 676 DQEKTCRR-EVIIDKCNRALDQLIDVANGRRRNYILDQKSNVYSSVQRRKIRTFCEYQRK 734
Query: 373 AVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPV 414
AVVV P E+ R + + V + M AN+ P+
Sbjct: 735 AVVVLPTDEEYNQR-LSAHGAIEGNVSESDLKEMKANFTAPL 775
>gi|339233358|ref|XP_003381796.1| putative SPRY domain protein [Trichinella spiralis]
gi|316979345|gb|EFV62150.1| putative SPRY domain protein [Trichinella spiralis]
Length = 991
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 179/360 (49%), Gaps = 23/360 (6%)
Query: 68 HQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDM---EDTPPDQQHVCRVGTSRGDD 124
++EGF + + RA G+ G F +I+ + VD+ E + + R+G + D
Sbjct: 165 NEEGFVHMLASGRATYGVYYGCVAFEVQIL--ENVDLSGNEYREEENAYELRLGWTV-DT 221
Query: 125 PVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGK 184
+LGET S+ + GK + F N+G K+ D I C ++ T+ F NGK
Sbjct: 222 SEMRLGETTYSYAYCSNGKLATEKYFENWGCKYSPTDVITCLVNFSE---GTVSFCLNGK 278
Query: 185 WLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE-QGLIPVEGYK 243
+G A +F V + + R +FP KNV + F + + P+
Sbjct: 279 LIGIAFRFP--------VQTFSQRR----PLFPAFTTKNVKFHINFGQQPEPWFPLPEEY 326
Query: 244 SWVSALDDGNSVLGPTFCNMKD-CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNL 302
+++ + GN + GP K+ C V+MM+GLP GK+ W ++ HPE+R+ LL +
Sbjct: 327 VFINDVPYGNRIRGPLPMKSKEECVVVMMIGLPGCGKSQWVRDYLSGHPEERWWLLSPSH 386
Query: 303 ILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRK 362
LEQM + G R + R+ +MG A + LL A + RN+IID TNVF ARKRK
Sbjct: 387 ALEQMSIQGTARFKFHQGRWDIVMGTAAKCYRKLLQMACKKKRNYIIDATNVFSVARKRK 446
Query: 363 LRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSD 422
L F +F++ A+V+ P E+ R + + K +VPADA+ M A + LP +D +D
Sbjct: 447 LAAFRDFQRKAIVIVPSEEEYARRLMHQSKNGTTQVPADALLEMKAGFSLPTMRDGQFTD 506
>gi|402591798|gb|EJW85727.1| SPRY domain-containing protein [Wuchereria bancrofti]
Length = 1179
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 193/417 (46%), Gaps = 50/417 (11%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSSGLHQE--------GFAYCWSGARANVGI------ 85
Q++ V ++DF D +K+S QE GFA W GAR+ GI
Sbjct: 668 QEEEPVPGDEQIEVDFYNADLNVKASETCQEIIDPDNGDGFALMWGGARSTYGIRIPSDV 727
Query: 86 -NGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKF 144
N F K++ P+ H RVG S + LGE S+ + K
Sbjct: 728 VNFPAVMFQIKLLDCLPIKHLPFEEIDAHNVRVGWSTQNS-TNILGEAPHSYAYDLLAKK 786
Query: 145 SHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA-KQFDAGSNGLGVVD 203
+ F ++GE VGD I +DL S I F KN ++LG A + + N +
Sbjct: 787 ATNNFFTDYGEPCQVGDVITSCLDLAS---GKIHFWKNVEYLGVAFSEVNFNKNDI---- 839
Query: 204 SAVKERQCESAVFPHILLKNVVVVMQFSVEQ-------------GLIPVEGYKSWVSALD 250
VFPHI KN + + + Q G++ ++ + S LD
Sbjct: 840 -----------VFPHICTKNYKLSVNYGDSQCEGWMSVTELQKNGVLSIDTSLIYFSKLD 888
Query: 251 DGNSVLGPTFCNMK-DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKV 309
V G + K +C V+MMVGLP GKTTW +++++HP++++ LL T+ IL MKV
Sbjct: 889 RTVLVRGLIPPSSKSECTVLMMVGLPGVGKTTWVRQYLREHPQEQWTLLSTDTILAAMKV 948
Query: 310 PGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF 369
G+ R + R+ +MG + L A R RN+IIDQTNV K AR+RKL F +F
Sbjct: 949 NGVPRSRVHQGRWDMIMGLIAKALNRSLHLACRRRRNYIIDQTNVSKEARRRKLSQFKDF 1008
Query: 370 RKIAVVVFPKPEDLKIRSVKRFKEMGK-EVPADAVNNMLANYVLPVNKDTPGSDELF 425
++ VV+ P E++ +R +K+ + G +P +A+ + A +P + P D F
Sbjct: 1009 QRKCVVIIPSEEEMIVRQMKQSRMDGAGPIPVEAMLELKAMLSIPNVELEPIEDVFF 1065
>gi|4884358|emb|CAB43291.1| hypothetical protein [Homo sapiens]
Length = 502
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 129/204 (63%), Gaps = 6/204 (2%)
Query: 214 AVFPHILLKNVVVVMQFSVEQ----GLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVM 269
A++PH+L+KN V F ++P + + + +GP + +CE++
Sbjct: 13 ALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPK--SKAECEIL 70
Query: 270 MMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRA 329
MMVGLPA+GKTTWA K +P K+Y +LGTN I+++M+V GL R+ NY+ R+ L+ +A
Sbjct: 71 MMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQA 130
Query: 330 NAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVK 389
+ L+ A+R RN+I+DQTNV+ SA++RK+R F F++ A+V+ P EDLK R++K
Sbjct: 131 TQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIK 190
Query: 390 RFKEMGKEVPADAVNNMLANYVLP 413
R E GK+VP AV M AN+ LP
Sbjct: 191 RTDEEGKDVPDHAVLEMKANFTLP 214
>gi|170585686|ref|XP_001897613.1| SPRY domain containing protein [Brugia malayi]
gi|158594920|gb|EDP33497.1| SPRY domain containing protein [Brugia malayi]
Length = 1405
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 193/417 (46%), Gaps = 50/417 (11%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSSGLHQE--------GFAYCWSGARANVGI------ 85
Q++ V ++DF D +K+S QE GFA W GAR+ GI
Sbjct: 899 QEEEPVPGDEQIEVDFYNADLNVKASETCQEIIDPDNGDGFALMWGGARSTYGIRISSDV 958
Query: 86 -NGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKF 144
N F K++ P+ H RVG S + LGE S+ + K
Sbjct: 959 VNFPAVMFQIKLLDCLPIKHLPFEEIDAHNVRVGWS-TQNSTNILGEAPHSYAYDLLAKK 1017
Query: 145 SHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA-KQFDAGSNGLGVVD 203
+ F ++GE VGD I +DL S I F KN ++LG A + + N +
Sbjct: 1018 ATNNFFTDYGEPCQVGDVITSCLDLAS---GKIHFWKNVEYLGVAFSEVNFNKNDI---- 1070
Query: 204 SAVKERQCESAVFPHILLKNVVVVMQFSVEQ-------------GLIPVEGYKSWVSALD 250
VFPHI KN + + + Q G++ ++ + S LD
Sbjct: 1071 -----------VFPHICTKNYKLSVNYGDSQCEGWMSVAELQKNGVLGIDTSLIYFSKLD 1119
Query: 251 DGNSVLGPTFCNMK-DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKV 309
V G + K +C V+MMVGLP GKTTW +++++HP++++ LL T+ IL MKV
Sbjct: 1120 RTVLVRGLIPPSSKSECTVLMMVGLPGVGKTTWVRQYLREHPQEQWTLLSTDTILAAMKV 1179
Query: 310 PGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF 369
G+ R + R+ +MG + L A R RN+IIDQTNV K AR+RKL F +F
Sbjct: 1180 NGVPRSRVHQGRWDMIMGLIAKALNRSLHLACRRRRNYIIDQTNVSKEARRRKLSQFKDF 1239
Query: 370 RKIAVVVFPKPEDLKIRSVKRFKEMGK-EVPADAVNNMLANYVLPVNKDTPGSDELF 425
++ VV+ P E++ +R +K+ + G +P +A+ + A +P + P D F
Sbjct: 1240 QRKCVVIIPSEEEMIVRQMKQSRMDGAGPIPVEAMLELKAMLSIPNVELEPIEDVFF 1296
>gi|113931484|ref|NP_001039190.1| heterogeneous nuclear ribonucleoprotein U-like 2 [Xenopus
(Silurana) tropicalis]
gi|89273901|emb|CAJ83849.1| Novel protein containing SPRY domain and SAP domain [Xenopus
(Silurana) tropicalis]
Length = 738
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 182/380 (47%), Gaps = 30/380 (7%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ CDL ++ + L E F WSG+RA G+ GK F K+ P
Sbjct: 232 VCLDKLTCDLQLKLDKDQFGGRPLFYEKFPSLWSGSRATHGVTKGKVYFEIKVTENLPQK 291
Query: 104 --MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+TP + RVG S +LGE + S+ + G +F +G+ FG D
Sbjct: 292 EGCTETP-----LLRVGWSVAQSS-SQLGEDDLSYAYDSRGLKVTSSHFDPYGDTFGEND 345
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I C DLE + + F+KNG+ LG A + V D + FPH+L
Sbjct: 346 VIGCFADLEGDSV-DLFFSKNGENLGEAFHLEKE-----VADQPL---------FPHVLC 390
Query: 222 KNVVVVMQFSV--EQGLIPVEGYKSWVSAL--DDGNSVLGPTFCNMKDCEVMMMVGLPAS 277
K V + F E P +G+ A D S+ P ++ EV++M+GLP S
Sbjct: 391 KGCVFQVNFGQKDEAWHPPPDGFIFLKDAQPEDLARSLESP---ETEEYEVLLMIGLPGS 447
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLL 337
GKTTWA +++ EK+Y+LL T+++L Q+K G + S+ L A L+
Sbjct: 448 GKTTWALNHSQENSEKKYLLLSTDILLPQLKTAGPDPQQEDSKAKDSLTQLATQCLIRLI 507
Query: 338 SRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKE 397
A+R RN+IIDQ V+ SA++RK+ F F++ AVVV P E+ K R +R ++ G+
Sbjct: 508 PLAARRKRNYIIDQCTVYNSAQRRKMNCFKGFQRKAVVVVPSEEEWKKRVEQRKEKEGEI 567
Query: 398 VPADAVNNMLANYVLPVNKD 417
+P + M AN+ +P D
Sbjct: 568 IPETVLLEMKANFNIPKKTD 587
>gi|393909196|gb|EFO25881.2| SPRY domain-containing protein [Loa loa]
Length = 1433
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 190/421 (45%), Gaps = 58/421 (13%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSSGLHQE--------GFAYCWSGARANVGIN----- 86
Q++ V ++DF D +K+S QE GFA W GAR+ GI
Sbjct: 941 QEEEPVPGDEQVEVDFYNADLNVKASETCQEIIDPDNGDGFALMWGGARSTYGIQIPSDV 1000
Query: 87 GG--KYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKF 144
G F K++ P+ H RVG S + LGE S+ + K
Sbjct: 1001 AGFPTVIFQIKLLDCLPIKHLPFEEIDAHNVRVGWSTLNS-TNILGEAPHSYAYDLLAKK 1059
Query: 145 SHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA-KQFDAGSNGLGVVD 203
+ F ++GE VGD I +DL S I F KN ++LG A + N +
Sbjct: 1060 ATNNFFTDYGEPCQVGDVITSCLDLAS---GKIHFWKNVEYLGVAFSEVHFNENDI---- 1112
Query: 204 SAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLG--PTFC 261
VFPHI KN + SV G EG+ S L DG +G P +
Sbjct: 1113 -----------VFPHICTKN----YKLSVNYGDSQCEGWMSITELLKDGALNIGTSPIYF 1157
Query: 262 NMKD----------------CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILE 305
+ D C V+MMVGLP GKTTW +++++HP++++ LL T+ IL
Sbjct: 1158 SKLDRTVLVRGSIPPSSKSECTVLMMVGLPGVGKTTWVRQYLREHPQEQWTLLSTDTILA 1217
Query: 306 QMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRL 365
MKV G+ R + R+ +MG + L A R RN+IIDQTNV K AR+RKL
Sbjct: 1218 AMKVNGVPRSRVHQGRWDMIMGLIAKALNRSLHLACRRRRNYIIDQTNVSKDARRRKLSQ 1277
Query: 366 FVNFRKIAVVVFPKPEDLKIRSVKRFKEMGK-EVPADAVNNMLANYVLPVNKDTPGSDEL 424
F +F++ VV+ P E++ R +++ + G +P +A+ + A +P + P D
Sbjct: 1278 FKDFQRKCVVIIPSEEEMIARQMRQSRMDGAGPIPVEAMLELKAMLSIPNVEVEPIEDVF 1337
Query: 425 F 425
F
Sbjct: 1338 F 1338
>gi|291241097|ref|XP_002740454.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1-like
[Saccoglossus kowalevskii]
Length = 615
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 152/274 (55%), Gaps = 26/274 (9%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
VVL+ + DL I +G ++ L EGFAY W+GARA G+N GK CF K+V +
Sbjct: 345 VVLDKFNSDLHLKINKDGYIANPLCMEGFAYLWAGARATYGMNKGKICFEVKLVEN--LK 402
Query: 104 MEDTPPDQQH--VCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
++ P ++ H V RVG S D +LGE SFG+G K F +FGE++G GD
Sbjct: 403 VQHLPEEETHRNVVRVGYS-TDVCSFQLGEEPLSFGYGSNQKKCTNNTFEDFGEEYGEGD 461
Query: 162 TIICAIDLE-SKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHIL 220
I +D E KP+ I +AKNG+ +G A ++E E A+FPHIL
Sbjct: 462 VITAYVDFEGEKPV--ISYAKNGEDIGEA--------------FKIEEDLAEQALFPHIL 505
Query: 221 LKNVVVVMQFSV--EQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPAS 277
KN + + F E EG+ + + +L + G T + K+CE++MM+GLP S
Sbjct: 506 TKNFNIEVNFGQKDEPFFAIKEGF-TLIGSLPVEERIRGSTKPASKKECEILMMIGLPGS 564
Query: 278 GKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPG 311
GKTTWAEK+ K++ +KRY ++G ++++MK+ G
Sbjct: 565 GKTTWAEKYAKENSDKRYCIIGLKSLVDKMKILG 598
>gi|256082626|ref|XP_002577555.1| E1b-55kD-associated protein [Schistosoma mansoni]
Length = 1082
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 128/211 (60%), Gaps = 9/211 (4%)
Query: 212 ESAVFPHILLKNVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNM 263
SA+FPH+ +KNV F E IP + SW ++ L V G
Sbjct: 35 HSALFPHVYVKNVEFACNFGQENQSPWFSPNIPSDDPLSWQQMNCLPLSCRVHGRCPPQS 94
Query: 264 K-DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERF 322
K +CEV+MMVGLP +GKT +AE+ +H EK+Y +LGTNLIL++MKV G+ R+ NY R+
Sbjct: 95 KSECEVIMMVGLPGAGKTYFAEQQKTEHREKQYNILGTNLILDKMKVMGIARQRNYHGRW 154
Query: 323 QCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPED 382
L+ +A + L+S A RN+I+DQTNV+ SA++RK+R F F++ A+V+ P E+
Sbjct: 155 DVLIDKATKCLNTLISMACMRRRNYILDQTNVYPSAQRRKMRPFEGFKRKAIVIVPTDEE 214
Query: 383 LKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ R +R KE GKEVP AV M AN+ +P
Sbjct: 215 FRRRIAQREKEEGKEVPETAVLEMKANFGIP 245
>gi|360045303|emb|CCD82851.1| putative e1b-55kD-associated protein [Schistosoma mansoni]
Length = 1082
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 128/211 (60%), Gaps = 9/211 (4%)
Query: 212 ESAVFPHILLKNVVVVMQFSVEQGL------IPVEGYKSW--VSALDDGNSVLGPTFCNM 263
SA+FPH+ +KNV F E IP + SW ++ L V G
Sbjct: 35 HSALFPHVYVKNVEFACNFGQENQSPWFSPNIPSDDPLSWQQMNCLPLSCRVHGRCPPQS 94
Query: 264 K-DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERF 322
K +CEV+MMVGLP +GKT +AE+ +H EK+Y +LGTNLIL++MKV G+ R+ NY R+
Sbjct: 95 KSECEVIMMVGLPGAGKTYFAEQQKTEHREKQYNILGTNLILDKMKVMGIARQRNYHGRW 154
Query: 323 QCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPED 382
L+ +A + L+S A RN+I+DQTNV+ SA++RK+R F F++ A+V+ P E+
Sbjct: 155 DVLIDKATKCLNTLISMACMRRRNYILDQTNVYPSAQRRKMRPFEGFKRKAIVIVPTDEE 214
Query: 383 LKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ R +R KE GKEVP AV M AN+ +P
Sbjct: 215 FRRRIAQREKEEGKEVPETAVLEMKANFGIP 245
>gi|270003748|gb|EFA00196.1| hypothetical protein TcasGA2_TC003021 [Tribolium castaneum]
Length = 968
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 168/314 (53%), Gaps = 17/314 (5%)
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ ++T P H+ RVG S D + +LGE + S+G+ +G+F+ F ++G+KFGVGD
Sbjct: 418 ETKETEPIPTHLFRVGWSLLDTGL-QLGEDKFSYGYESSGRFALNKQFEDYGKKFGVGDV 476
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ +++ + I ++ NG+ G A + V S + E FPH+L +
Sbjct: 477 VASFLEITEAEIK-ISYSVNGEMQGDA---------ISVPCSDLPEN---FVFFPHVLSR 523
Query: 223 NVVVVMQF--SVEQGLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGK 279
N + E EG++ + + V GP N DCEV++M GLPA+GK
Sbjct: 524 NYAFELNLGNKEEAWFSKPEGFEDFEFLANVEEKVAGPARPENRSDCEVILMCGLPAAGK 583
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
T W +++V+++PEKRY +LG +L++M V G K+ Y + L+ + + L+
Sbjct: 584 THWVQEYVQENPEKRYTVLGNTHLLQKMTVSGDELKNKYKGSWNMLLEKLQKCLNKLVEV 643
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+ RN+IIDQ NV+ SA++RKLR F F++ AVVV E+ R + + GK+VP
Sbjct: 644 AALRRRNYIIDQPNVYPSAQRRKLRPFEGFKRRAVVVVVGDEEQAKRQSLQEAQGGKDVP 703
Query: 400 ADAVNNMLANYVLP 413
V +M AN LP
Sbjct: 704 DSTVLDMKANMSLP 717
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 5 KRELELPDGDKPESVVKKA--KVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGL 62
KR P D+ + K+ K D+P D K +V L+ D DL ++
Sbjct: 210 KRRRSSPSPDRSQRRRSKSPIKEDEPPID---------KDKVQLSWYDSDLHLQVDKESF 260
Query: 63 KSSGLHQEG-FAYCWSGARANVGINGGKYCFGCKIVSTQPVDMED 106
S+ + EG F + W+G RA G+N GK CF K+ T+ + ED
Sbjct: 261 LSAKPYHEGAFGFAWAGVRATHGVNTGKVCFEVKV--TEELKWED 303
>gi|189235221|ref|XP_967494.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
U-like 1 [Tribolium castaneum]
Length = 964
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 168/314 (53%), Gaps = 17/314 (5%)
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ ++T P H+ RVG S D + +LGE + S+G+ +G+F+ F ++G+KFGVGD
Sbjct: 418 ETKETEPIPTHLFRVGWSLLDTGL-QLGEDKFSYGYESSGRFALNKQFEDYGKKFGVGDV 476
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ +++ + I ++ NG+ G A + V S + E FPH+L +
Sbjct: 477 VASFLEITEAEIK-ISYSVNGEMQGDA---------ISVPCSDLPEN---FVFFPHVLSR 523
Query: 223 NVVVVMQF--SVEQGLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGK 279
N + E EG++ + + V GP N DCEV++M GLPA+GK
Sbjct: 524 NYAFELNLGNKEEAWFSKPEGFEDFEFLANVEEKVAGPARPENRSDCEVILMCGLPAAGK 583
Query: 280 TTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSR 339
T W +++V+++PEKRY +LG +L++M V G K+ Y + L+ + + L+
Sbjct: 584 THWVQEYVQENPEKRYTVLGNTHLLQKMTVSGDELKNKYKGSWNMLLEKLQKCLNKLVEV 643
Query: 340 ASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
A+ RN+IIDQ NV+ SA++RKLR F F++ AVVV E+ R + + GK+VP
Sbjct: 644 AALRRRNYIIDQPNVYPSAQRRKLRPFEGFKRRAVVVVVGDEEQAKRQSLQEAQGGKDVP 703
Query: 400 ADAVNNMLANYVLP 413
V +M AN LP
Sbjct: 704 DSTVLDMKANMSLP 717
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 5 KRELELPDGDKPESVVKKA--KVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGL 62
KR P D+ + K+ K D+P D K +V L+ D DL ++
Sbjct: 210 KRRRSSPSPDRSQRRRSKSPIKEDEPPID---------KDKVQLSWYDSDLHLQVDKESF 260
Query: 63 KSSGLHQEG-FAYCWSGARANVGINGGKYCFGCKIVSTQPVDMED 106
S+ + EG F + W+G RA G+N GK CF K+ T+ + ED
Sbjct: 261 LSAKPYHEGAFGFAWAGVRATHGVNTGKVCFEVKV--TEELKWED 303
>gi|324499925|gb|ADY39980.1| Heterogeneous nuclear ribonucleoprotein U [Ascaris suum]
Length = 1756
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 184/379 (48%), Gaps = 41/379 (10%)
Query: 70 EGFAYCWSGARANVGINGGKYCFGCKIVSTQP-----VDMEDTPPDQ--QHVCRVGTSRG 122
+GFA W G R+ GI G +V+ Q + ++ P ++ + R+G S
Sbjct: 1275 DGFALMWGGVRSTYGIRVPDSLEGFPVVAFQAKVLEFLSIKHIPFEEVDAYDVRIGWSLQ 1334
Query: 123 DDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKN 182
+ LGE+ S+ F T + + G F ++GE F + D + A+DL I + N
Sbjct: 1335 NT-QSILGESAHSYAFSLTARKTLGNVFTDYGEPFRIDDIVTTAVDLAK---GEISYWVN 1390
Query: 183 GKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF---SVEQGL--- 236
+W+G A F G V +FPHI KN V + F + ++ L
Sbjct: 1391 KQWMGVA--FSEVHLMPGEV------------LFPHICTKNCKVAVNFGEGAADKWLSLD 1436
Query: 237 -IPVEGYKSWVSA-------LDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKTTWAEKWV 287
+ EG VS L+ + GP + K +C V+MMVGLP GKTTW +++
Sbjct: 1437 ELSTEGRAEAVSQQMIFAADLERDRLLRGPVPPSSKGECTVLMMVGLPGVGKTTWVRQYL 1496
Query: 288 KDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNF 347
KDHP +++ LL T+ IL MKV G+ R + R+ +MG L A R RN+
Sbjct: 1497 KDHPHEQWTLLSTDTILAAMKVNGVARCRVHQGRWDMVMGLTAKALTRSLHLACRRRRNY 1556
Query: 348 IIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG-KEVPADAVNNM 406
IIDQTNV K AR++KL F +F++ VV+ P E++ R +++ + G ++P +A+ +
Sbjct: 1557 IIDQTNVSKDARRKKLSQFKDFQRKCVVIIPSEEEMLNRQMRQSRADGIGQIPVEAMLEL 1616
Query: 407 LANYVLPVNKDTPGSDELF 425
A + +P + P D F
Sbjct: 1617 KATFSIPNVELEPVEDVYF 1635
>gi|163915958|gb|AAI57436.1| LOC100137638 protein [Xenopus laevis]
gi|169642427|gb|AAI60710.1| Unknown (protein for IMAGE:5514486) [Xenopus laevis]
Length = 551
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 165/344 (47%), Gaps = 25/344 (7%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+ L+ CDL ++++ L E F WSG+RA G+ GK F K+ P
Sbjct: 229 LCLDKLTCDLQLKMDNDRFGGRPLFFEKFPSLWSGSRATHGVTKGKVYFEIKLTENLPQK 288
Query: 104 --MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+TP + RVG S G +LGE + S+ + G +F +GE FG D
Sbjct: 289 EGCTETP-----LLRVGWSVGQS-SPQLGEDDLSYAYDSRGLKVTSSHFDPYGETFGEND 342
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I C DLE + + F+KNG LG A F+ KE + +FPH+L
Sbjct: 343 VIGCFADLEGDSVDLL-FSKNGDNLGQAFHFE-------------KEVLGDQPLFPHVLC 388
Query: 222 KNVVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKT 280
K + F E+ P ++ D L + ++ DCEV++M+GLP SGKT
Sbjct: 389 KGCAFQVNFGQKEEAWHPPPD--EFIFLKDAQPEDLARSLESIDDCEVLLMIGLPGSGKT 446
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRA 340
TWA K +++ EK+Y+L+ T++++ Q+K G + L A L+ A
Sbjct: 447 TWALKHSQENSEKQYLLMSTDILIPQLKTAGPDSNQEDPKARDSLTKLATQCLIRLIPLA 506
Query: 341 SRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLK 384
SR RN+IIDQ V+ SA++RK+ F F++ AVVV P E K
Sbjct: 507 SRRKRNYIIDQCTVYNSAQRRKMNCFKGFQRKAVVVVPNEEKKK 550
>gi|340374537|ref|XP_003385794.1| PREDICTED: hypothetical protein LOC100637376 [Amphimedon
queenslandica]
Length = 841
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 206/465 (44%), Gaps = 62/465 (13%)
Query: 5 KRELELPDGD--KPESVVKKAKVDDP--VSDSSASG-----------PRSQKQRVVLNPA 49
+ E E DGD K E+ V V DP V+D S P V LNP
Sbjct: 276 REESEGLDGDSKKEETKVDPQTVPDPESVADWSDESIKEICSSLFLLPEDTTASVTLNPR 335
Query: 50 DCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDM----- 104
DL F I +GL + L + GFAY + ++A G+ G Y F CKI PVD+
Sbjct: 336 KSDLHFIISSDGLGGAPLTEGGFAYLRASSKATWGVKSGSYYFECKIEEKLPVDIEEEDE 395
Query: 105 ---------EDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGGTGKFSHGGNFLNFG 154
T P H RVG S D D + G+ + SF + +GK N ++G
Sbjct: 396 NGGGEGEIVRKTEP--SHNVRVGWSSLDSDTIA--GDDKNSFAYDSSGKKVTRSNSEDYG 451
Query: 155 EKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESA 214
E F GD I C + L + TI F KNG + + F+ + E ES
Sbjct: 452 ETFDEGDVIGCYVKL-TDDSRTILFTKNG--VSQTEAFN------------LLELNSESI 496
Query: 215 VFPHILLKNVVVVMQF---SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMM 271
+FPH+ +N V F P E Y+ A ++ + + +CEV+MM
Sbjct: 497 LFPHVSTRNYRVSFNFGGNPEPYYPPPDETYRPLQEAGEEERECVPNKPLSKNECEVIMM 556
Query: 272 VGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANA 331
VGLP GKT WA + + +K + ++G +LE+M N++E F L
Sbjct: 557 VGLPGCGKTHWASRHASKNFDKAFRIIGPYQLLERMLSKKRRSMTNWNE-FVLLTA---P 612
Query: 332 IFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRF 391
+ + L AS P N+IIDQ NV+ ++K K+ F F + A+VV P +L+ R V R
Sbjct: 613 MVNTLCLLASNMPGNYIIDQINVYADSQKTKMSYFEGFSRKALVVIPPHHELRKRRVDRI 672
Query: 392 KE-MGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQRRGSAAFG 435
+E EVP + ++ AN+ +P D +FD+ S +G
Sbjct: 673 REGCCMEVPQNVIDAFKANFHIPREDDG-----VFDEINFSEIYG 712
>gi|312070540|ref|XP_003138194.1| SPRY domain-containing protein [Loa loa]
Length = 1365
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 168/361 (46%), Gaps = 50/361 (13%)
Query: 70 EGFAYCWSGARANVGIN-----GG--KYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRG 122
+GFA W GAR+ GI G F K++ P+ H RVG S
Sbjct: 1021 DGFALMWGGARSTYGIQIPSDVAGFPTVIFQIKLLDCLPIKHLPFEEIDAHNVRVGWSTL 1080
Query: 123 DDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKN 182
+ LGE S+ + K + F ++GE VGD I +DL S I F KN
Sbjct: 1081 NS-TNILGEAPHSYAYDLLAKKATNNFFTDYGEPCQVGDVITSCLDLAS---GKIHFWKN 1136
Query: 183 GKWLGTA-KQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEG 241
++LG A + N + VFPHI KN + SV G EG
Sbjct: 1137 VEYLGVAFSEVHFNENDI---------------VFPHICTKN----YKLSVNYGDSQCEG 1177
Query: 242 YKSWVSALDDGNSVLG--PTFCNMKD----------------CEVMMMVGLPASGKTTWA 283
+ S L DG +G P + + D C V+MMVGLP GKTTW
Sbjct: 1178 WMSITELLKDGALNIGTSPIYFSKLDRTVLVRGSIPPSSKSECTVLMMVGLPGVGKTTWV 1237
Query: 284 EKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRT 343
+++++HP++++ LL T+ IL MKV G+ R + R+ +MG + L A R
Sbjct: 1238 RQYLREHPQEQWTLLSTDTILAAMKVNGVPRSRVHQGRWDMIMGLIAKALNRSLHLACRR 1297
Query: 344 PRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGK-EVPADA 402
RN+IIDQTNV K AR+RKL F +F++ VV+ P E++ R +++ + G +P +A
Sbjct: 1298 RRNYIIDQTNVSKDARRRKLSQFKDFQRKCVVIIPSEEEMIARQMRQSRMDGAGPIPVEA 1357
Query: 403 V 403
+
Sbjct: 1358 M 1358
>gi|444711070|gb|ELW52024.1| Heterogeneous nuclear ribonucleoprotein U-like protein 2 [Tupaia
chinensis]
Length = 620
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 144/283 (50%), Gaps = 25/283 (8%)
Query: 131 ETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAK 190
E E S+GF G G + G F FG+ FG D I C + E++ + + F+KNG+ LG A
Sbjct: 196 EDEFSYGFDGRGLKAENGQFEEFGQTFGENDVIGCFANFETEEV-ELSFSKNGEDLGVAF 254
Query: 191 QFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALD 250
+ + KE + A+ PH+L KN VV + F +
Sbjct: 255 RIN-------------KESLVDRALLPHVLCKNCVVELNFG-----------QKEEPFFP 290
Query: 251 DGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVP 310
+ +++ V++MVGLP SGKT WA K+ K++PEKRY +LG +L QM++
Sbjct: 291 PPEEFVFIHAVPVEEXXVILMVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMK 350
Query: 311 GLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFR 370
GL + L+ +A+ L+ ASRT RNFI+DQ NV+ S ++RKL LF F
Sbjct: 351 GLEEPEMDPKSRDLLVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFS 410
Query: 371 KIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ VVV P ED K R R + G +VP + M AN+ LP
Sbjct: 411 RKVVVVVPNEEDWKKRLELRKEVEGDDVPESIMLEMKANFSLP 453
>gi|444708463|gb|ELW49526.1| Heterogeneous nuclear ribonucleoprotein U [Tupaia chinensis]
Length = 469
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 153/287 (53%), Gaps = 18/287 (6%)
Query: 130 GETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
GE E S+G+ G + ++GEKF D I C + ES + + +AKNG+ LG A
Sbjct: 16 GEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVE-LSYAKNGQDLGIA 74
Query: 190 KQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVEGYKSWVSA 248
+ KE +FPH+L N V F E+ P+ +++ +
Sbjct: 75 FKIS-------------KEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEEYTFIQS 121
Query: 249 LDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQM 307
+ + V GP KDCEV+MM+GLP +GKTTW K ++P K Y +LGTN I+++M
Sbjct: 122 VPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGK-YNILGTNTIMDKM 180
Query: 308 KVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFV 367
V G ++ + + L+ RA + A+R RNFI+DQTNV +A++RK+ LF
Sbjct: 181 MVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFA 240
Query: 368 NFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLA-NYVLP 413
F++ AVVV PK ED K R+ K+ + GK++P AV M N+ LP
Sbjct: 241 GFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGRNFTLP 287
>gi|94449817|gb|ABF19507.1| unknown [Schistosoma japonicum]
Length = 471
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 165/324 (50%), Gaps = 36/324 (11%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL+ I+ G ++ L + GF+ +GA+AN G K F K+V V+
Sbjct: 166 VFLDTYNCDLNLLIDATGCQAKPLVEGGFSLMRAGAKANYGTISKKSFFEVKVVKNLQVE 225
Query: 104 MEDT-PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
D+ HV R+G S +D LGE QS+G+GGTGK S F+++ FG GD
Sbjct: 226 NYDSLVGGATHVLRIGWST-EDADFTLGEEPQSYGYGGTGKKSCNNKFVDYSCTFGEGDV 284
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ I+ S A + F+ NG G + V S + ER A+FPH+ +K
Sbjct: 285 VGAFIEWTSAE-AVLRFSVNGVDQGECYR---------VQKSQLGERY---ALFPHVYVK 331
Query: 223 NVVVVMQFSVEQGL------IPVEGYKSWVSALDDGNSVLGPTFCNMK---------DCE 267
NV F E IP + SW NS+ P C ++ +C
Sbjct: 332 NVEFACNFGQENQPAWFSPNIPSDDPLSWQQI----NSL--PLSCRVRGRCPPQSKAECG 385
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMG 327
V+MMVGLP +GKT + E+ +H EK+Y LLGTNLIL++MKV G+ R+ NY R+ L+
Sbjct: 386 VIMMVGLPGAGKTYFTERLKAEHREKQYNLLGTNLILDKMKVMGIARQCNYHGRWDVLID 445
Query: 328 RANAIFDVLLSRASRTPRNFIIDQ 351
++ + L+S A RN+I+DQ
Sbjct: 446 KSTKCLNTLISMACMRRRNYILDQ 469
>gi|302850146|ref|XP_002956601.1| hypothetical protein VOLCADRAFT_119430 [Volvox carteri f.
nagariensis]
gi|300258128|gb|EFJ42368.1| hypothetical protein VOLCADRAFT_119430 [Volvox carteri f.
nagariensis]
Length = 864
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 193/463 (41%), Gaps = 105/463 (22%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQPV 102
V LNP DC+LD + + L + L + G YCWSG RAN+GI GK+ F + + +PV
Sbjct: 14 VSLNPLDCNLDTILSSDRLSAHTLSEAGCGYCWSGVRANLGIFARGKFFFRVTVGAPRPV 73
Query: 103 DMEDTPP-DQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTG-KFSHGGNFLN-------- 152
++ +T + RVG SR V +LGE S+ + TG + S G N
Sbjct: 74 NVHNTAALSTAYGIRVGVSRFQTAVEQLGEVPYSWAYCSTGSRASFPGAPTNGSGGDGGG 133
Query: 153 --------FGEKFGV----GDTIICAIDLESKPLATIGFAKNGKWL-------------- 186
F E G GDTI A+DL + P A G+
Sbjct: 134 DGGGGYPVFEEAVGPRVVPGDTITLALDLATAP------APGGRQAAAAANTADPAPSAV 187
Query: 187 -------------GTAKQFDAGSNGLGVVD--SAVKERQCESAVFPHILLKNVVVVMQFS 231
G NG +V S Q A FPHILL+N+ F
Sbjct: 188 AEAAAAADANAGEGPQGSLWVAVNGGKLVRLFSLPLPNQPMQAYFPHILLRNLSATADFV 247
Query: 232 VEQGLIPV---------------------------EGYKSWVSAL---DDGNSVLGPT-- 259
Q P G++ W A D S + P
Sbjct: 248 GTQSPEPQGTKELQRQRQQQPQPQRHHELPAGLLERGFRPWQEATIVTADCVSTMPPPGQ 307
Query: 260 FCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYS 319
CEV+++ GLP SGKTTWA + HP +RY +LGT L+LEQM++ +
Sbjct: 308 LPPASKCEVLVLTGLPGSGKTTWAARHCAAHPARRYCVLGTQLVLEQMRL-----SCPRT 362
Query: 320 ERFQCLMGRANAIFDV-------LLSRASRTPRNFIIDQTNVFKSARKRKLRLF--VNFR 370
RF MG+ +F + + +RA TPRN+I+D+T+V +R+ + F FR
Sbjct: 363 RRFH-YMGKPEEVFALVADTLTRIQARAPATPRNYILDRTHVTSKSRRNAVVPFRAAGFR 421
Query: 371 KIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+V V + L + + F+ GK VP +A+ + A++ LP
Sbjct: 422 CASVAVVSTEDKLLAQQKEAFEREGKVVPDEAMAVLRADFTLP 464
>gi|156374060|ref|XP_001629627.1| predicted protein [Nematostella vectensis]
gi|156216631|gb|EDO37564.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 128/235 (54%), Gaps = 23/235 (9%)
Query: 78 GARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFG 137
G RA G GK CF CK+ T VD+ DT + +H RVG S D +LGE S+G
Sbjct: 4 GVRATYGATSGKICFECKLTETAEVDLPDTE-EPKHFVRVGWSS-DSANLQLGEVALSYG 61
Query: 138 FGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSN 197
F TGK F FG+ F GD I C +DLES P I F+KNG+ LG+A FD +
Sbjct: 62 FDSTGKKCTNNEFTEFGQAFTAGDVIACYLDLESSP-KQISFSKNGEDLGSA--FDLPED 118
Query: 198 GLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSV--EQGLIPVEGYKSWVSALDDG--N 253
G A+FPH+++KN+ + F E P EG++ +A D +
Sbjct: 119 AQG------------KALFPHVMIKNIDCSLNFGTQEEAWFAPKEGFQFIQNAEKDTLEH 166
Query: 254 SVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMK 308
GP + ++CEV+MM+GLPASGKTTW + +HP+K+Y +L T ++E+MK
Sbjct: 167 GTRGPA--SKEECEVIMMIGLPASGKTTWVNNHLNEHPDKKYNILSTYSVMEKMK 219
>gi|322798392|gb|EFZ20116.1| hypothetical protein SINV_80034 [Solenopsis invicta]
Length = 996
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 186/402 (46%), Gaps = 50/402 (12%)
Query: 16 PESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNG-LKSSGLHQEGFAY 74
P V+ KA+ D+P D SA V+L+ D DL+ I+ NG L ++ +H
Sbjct: 390 PSPVLPKAE-DEPDLDESA---------VILSWYDSDLNLVIDKNGFLSATPMHNGDLCD 439
Query: 75 CWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W+GARA+ G+ GK + KI P +D H+ R+G S + +LGE +
Sbjct: 440 MWAGARASHGVLNGKVYYEAKITQHCPTVTKDE--KHLHMLRIGWSVPSASM-QLGEEKL 496
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
S+ + G+ F ++G FG D + C +D+ + + + NG+ +G+A F
Sbjct: 497 SYAYTSAGQQGTDRKFTDYGFPFGKDDVVGCYLDMTPENTVELFYTVNGENVGSA--FSV 554
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP-VEGYKSWVSALDDGN 253
+ LG + +FPHIL KN V F E+ V GY V ++ +
Sbjct: 555 SKDELG-----------DRPLFPHILSKNCTFVCNFGQEEPWCERVPGY-VLVGNIESED 602
Query: 254 SVLGPTFCNMK-DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGL 312
+V GP + K DCEV+MM GLPA+GKTTWA K +HP+K Y +L + ++E+ L
Sbjct: 603 TVAGPRRPDGKADCEVIMMCGLPAAGKTTWAMKHASNHPDKLYNILALHNLIEKTGDIAL 662
Query: 313 LRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKI 372
+ + + ++GR D L++ A RN+I+DQ +
Sbjct: 663 SDQEQNTCQRDIIIGRCTRALDQLINVAGGRRRNYILDQ-------------------RK 703
Query: 373 AVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPV 414
A++V P E+ R GK V + M AN+ P+
Sbjct: 704 AIIVLPTNEEYNQRLSTHNAIEGK-VSESKLMEMKANFTAPL 744
>gi|431906495|gb|ELK10618.1| Heterogeneous nuclear ribonucleoprotein U [Pteropus alecto]
Length = 668
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 141/269 (52%), Gaps = 17/269 (6%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LGE E S+G+ G + ++GEKF D I C + ES + + +AKNG+ LG
Sbjct: 228 LGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVE-LSYAKNGQDLGV 286
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVEGYKSWVS 247
A + KE + H+L N V F E+ P+ +++
Sbjct: 287 AFKIS-------------KEVLAGRPLSQHVLCHNCAVEFNFGQKEKPYFPIPEDYTFIQ 333
Query: 248 ALDDGNSVLGPTFCN-MKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQ 306
+ + V GP KDCEV+MM+GLP +GKTTW K ++P K Y +LGTN I+++
Sbjct: 334 NVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGK-YNILGTNTIMDK 392
Query: 307 MKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLF 366
M V G ++ + + L+ RA + A+R RNFI+DQTNV +A++RK+ LF
Sbjct: 393 MMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLF 452
Query: 367 VNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
F++ AVVV PK ED K R+ K+ + +G
Sbjct: 453 AGFQRKAVVVCPKDEDYKQRTQKKAELLG 481
>gi|323650142|gb|ADX97157.1| heterogeneous nuclear ribonucleoprotein u [Perca flavescens]
Length = 293
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 144/288 (50%), Gaps = 21/288 (7%)
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
S+ + G GK + +FGE + D I C ID E + + + F+KNG A Q +
Sbjct: 1 SYAYSGKGKKTTNCVTEDFGETYEENDVICCLIDFEGEDV-VLSFSKNGAEPAVAFQVN- 58
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPV-EGYKSWVSA-LDD 251
KE A+FPH++ N V F +E P +GY LDD
Sbjct: 59 ------------KETLNGQALFPHVICHNCAVEFNFGQMETPYFPQPQGYTFLQQMPLDD 106
Query: 252 G-NSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVP 310
+ GP DCE+++MVGLP SGKTTW + V+++P K YIL G++ I+++M +
Sbjct: 107 RVRGLKGPQ--TKADCEIIVMVGLPGSGKTTWVKNHVQENPGKYYIL-GSDTIVDKMMIN 163
Query: 311 GLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFR 370
L R+ + + RA + A+R RN+I+D TN+ +KRK+ LF F+
Sbjct: 164 SLKRQSKDITKLTAISQRAPLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGFQ 223
Query: 371 KIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDT 418
+ AVVV P E+ K R K+ + GKEVP AV M Y LP ++
Sbjct: 224 RKAVVVCPSDEEYKQRVQKKVESDGKEVPEHAVFKMKGFYSLPAEGES 271
>gi|391326804|ref|XP_003737901.1| PREDICTED: uncharacterized protein LOC100904737 [Metaseiulus
occidentalis]
Length = 1141
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 184/393 (46%), Gaps = 46/393 (11%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVST 99
Q+ + L+ DL+ I+ + L + FA+ +G + + G GK F K++
Sbjct: 309 QRTTITLDEYTSDLNCSIDAETMSIVPLSESYFAWMCAGVKCSHGFIKGKIRFDVKVLEL 368
Query: 100 QPVDMEDTPPDQQHVCRVG-TSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGE--K 156
VD++ D++H+ RVG R D +LGE EQS+ +GK GG+F F E
Sbjct: 369 LDVDIDS---DEKHLLRVGFCRRLDHQSARLGEDEQSWALSSSGKKGSGGDFEGFAELPD 425
Query: 157 FGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSN------------------- 197
VGD ++L++ P A + FA NGK LG A + GS
Sbjct: 426 LKVGDVFSSMLNLDTCP-AELRFAHNGKDLGVAFEIPPGSQQVLAAPTASGGTEKKTDDE 484
Query: 198 GLGVVDSAVKERQCE-----------SAVFPHILLKNVVVVMQFSVEQGLIPVEGYK--- 243
G + Q E SA++P +L KN+ V + + L PVEG +
Sbjct: 485 GSASQEEPTSTDQGEKPEADVGEGKISALYPAVLTKNIKVEVNLGQAEAL-PVEGCELEH 543
Query: 244 SWVSALDDGNSV---LGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGT 300
+ + N V + P + ++ E++MM+GLP+SGK+TWA + V+ HPEK Y +LG
Sbjct: 544 IFPLKTEPSNRVKDDIAP--YSRRESELIMMIGLPSSGKSTWARRHVEKHPEKHYNVLGI 601
Query: 301 NLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARK 360
+ IL++M + G +S L + L+ A+ RN I+D +NV S +
Sbjct: 602 STILDRMIIEGKPEAKKFSGDEDELSKMTTSCLSKLIETAASRRRNIILDDSNVKGSVQV 661
Query: 361 RKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKE 393
+ RLF F++ AV++ E LK R KR E
Sbjct: 662 TRWRLFDGFKRRAVILITTAETLKERHAKRSPE 694
>gi|392901956|ref|NP_001255854.1| Protein Y41E3.11, isoform b [Caenorhabditis elegans]
gi|6580282|emb|CAB63361.1| Protein Y41E3.11, isoform b [Caenorhabditis elegans]
Length = 917
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 189/423 (44%), Gaps = 66/423 (15%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSS--------GLHQEGFAYCWSGARANVGIN----- 86
+++RV + +LD+ D +KS+ +Q+G A W G R+N GI
Sbjct: 183 EEERVPADSETIELDYYNADILVKSAEKDIWQIEPFNQDGLALMWGGIRSNFGIKLPFKQ 242
Query: 87 -----GGKYCFGCKIVSTQPVDMEDTPPDQQHV----------CRVGTSRGDDPVGKLGE 131
+ F +I S Q + QH+ R+G S LGE
Sbjct: 243 TGKDASHRLAFQIQIDSYQSI---------QHLPTEFMADGGDVRIGFSLASTASLILGE 293
Query: 132 TEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT--- 188
+ S+ +GK + +F +FG+ F +GD + C DL + TI + NG+ +G+
Sbjct: 294 SPGSWCISASGKRAANNHFSDFGKLFDIGDVVTCIFDLS---VGTISYQINGENVGSPFE 350
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN----VVVVMQFSVEQGLIPVEGYKS 244
+ QF G +FP I KN V + + + E+ IP +
Sbjct: 351 SLQFREGD-----------------VIFPTICTKNANINVNMGQELTDEKWKIPEDRDWM 393
Query: 245 WVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLI 303
+++ +D + V T KDC V+M VGLP GKTTW +++ +HP + + L+ +++
Sbjct: 394 FITEMDRAHLVRSHTAPAAKKDCTVLMTVGLPGVGKTTWVRRYLAEHPHEHWTLISADVV 453
Query: 304 LEQMKVPGLLR-KHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRK 362
++ MKV G+ R + +R L G + L+ A R +N+I+D TN F RKRK
Sbjct: 454 MDAMKVNGVPRIRLPTLKRPDFLRGIIGKSMNRLILLAPRRRKNYILDMTNCFAEKRKRK 513
Query: 363 LRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSD 422
L F F + ++ P + + R +K+ E +++ DA+ A LP+ + +
Sbjct: 514 LMAFEEFNRKCMLFVPDEDTHQKRLIKQEHEENEKLDTDAMMQHKAAMSLPIVAEGEPCE 573
Query: 423 ELF 425
EL
Sbjct: 574 ELI 576
>gi|392901954|ref|NP_001255853.1| Protein Y41E3.11, isoform a [Caenorhabditis elegans]
gi|222350628|emb|CAX32487.1| Protein Y41E3.11, isoform a [Caenorhabditis elegans]
Length = 1667
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 189/423 (44%), Gaps = 66/423 (15%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSS--------GLHQEGFAYCWSGARANVGIN----- 86
+++RV + +LD+ D +KS+ +Q+G A W G R+N GI
Sbjct: 933 EEERVPADSETIELDYYNADILVKSAEKDIWQIEPFNQDGLALMWGGIRSNFGIKLPFKQ 992
Query: 87 -----GGKYCFGCKIVSTQPVDMEDTPPDQQHV----------CRVGTSRGDDPVGKLGE 131
+ F +I S Q + QH+ R+G S LGE
Sbjct: 993 TGKDASHRLAFQIQIDSYQSI---------QHLPTEFMADGGDVRIGFSLASTASLILGE 1043
Query: 132 TEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT--- 188
+ S+ +GK + +F +FG+ F +GD + C DL + TI + NG+ +G+
Sbjct: 1044 SPGSWCISASGKRAANNHFSDFGKLFDIGDVVTCIFDLS---VGTISYQINGENVGSPFE 1100
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN----VVVVMQFSVEQGLIPVEGYKS 244
+ QF G +FP I KN V + + + E+ IP +
Sbjct: 1101 SLQFREGD-----------------VIFPTICTKNANINVNMGQELTDEKWKIPEDRDWM 1143
Query: 245 WVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLI 303
+++ +D + V T KDC V+M VGLP GKTTW +++ +HP + + L+ +++
Sbjct: 1144 FITEMDRAHLVRSHTAPAAKKDCTVLMTVGLPGVGKTTWVRRYLAEHPHEHWTLISADVV 1203
Query: 304 LEQMKVPGLLR-KHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRK 362
++ MKV G+ R + +R L G + L+ A R +N+I+D TN F RKRK
Sbjct: 1204 MDAMKVNGVPRIRLPTLKRPDFLRGIIGKSMNRLILLAPRRRKNYILDMTNCFAEKRKRK 1263
Query: 363 LRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSD 422
L F F + ++ P + + R +K+ E +++ DA+ A LP+ + +
Sbjct: 1264 LMAFEEFNRKCMLFVPDEDTHQKRLIKQEHEENEKLDTDAMMQHKAAMSLPIVAEGEPCE 1323
Query: 423 ELF 425
EL
Sbjct: 1324 ELI 1326
>gi|255567407|ref|XP_002524683.1| conserved hypothetical protein [Ricinus communis]
gi|223536044|gb|EEF37702.1| conserved hypothetical protein [Ricinus communis]
Length = 283
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 98/173 (56%), Gaps = 31/173 (17%)
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
MEDTPP +QHVCRVG SRGDD VGKLG+T S+ FGG+ KF + + G+G I
Sbjct: 17 MEDTPPYEQHVCRVGISRGDDAVGKLGKTLHSYVFGGSIKFLMLDSLQIGVKSLGLGLEI 76
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
+ L LG AK DAG GLGVV+S +K+ Q
Sbjct: 77 PLFVLLTLN-------------LGYAKPLDAGPTGLGVVNSPMKQPQ------------- 110
Query: 224 VVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPA 276
FSVE GL+PV +K W SALDDGN++ GP F ++ DC+VMM+VGLPA
Sbjct: 111 -----WFSVEDGLVPVHKFKPWNSALDDGNAISGPVFTDIGDCKVMMLVGLPA 158
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 344 PRNFIIDQTN-----VFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
P N +D N VF K+ + V + VVVFPK +LK+R+ KR KEMG+EV
Sbjct: 126 PWNSALDDGNAISGPVFTDIGDCKVMMLVGLPAL-VVVFPKAHELKLRADKRCKEMGREV 184
Query: 399 PADAVNNMLANYVLPVNKDTPGSDELFDQ 427
PADAV N+ +Y LP++ D GSDE F Q
Sbjct: 185 PADAVKNISVSYALPMSMDMSGSDECFSQ 213
>gi|224078854|ref|XP_002305654.1| predicted protein [Populus trichocarpa]
gi|222848618|gb|EEE86165.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 87/137 (63%), Gaps = 29/137 (21%)
Query: 177 IGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGL 236
+G ++NGKWLG AK GL + V++ VE GL
Sbjct: 45 LGLSENGKWLGFAK-------GLMLAQG----------------------VLKCCVEDGL 75
Query: 237 IPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYI 296
+P +G K W SALDDGN+++GP ++ DCEVMMMVGLPASGKTTWAEKW +++PEKR++
Sbjct: 76 VPEQGCKPWASALDDGNAIMGPNSSDISDCEVMMMVGLPASGKTTWAEKWAEEYPEKRFV 135
Query: 297 LLGTNLILEQMKVPGLL 313
LLG NLIL++MK G++
Sbjct: 136 LLGRNLILDEMKCHGII 152
>gi|432119670|gb|ELK38570.1| Heterogeneous nuclear ribonucleoprotein U [Myotis davidii]
Length = 270
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 126/238 (52%), Gaps = 19/238 (7%)
Query: 157 FGVGDTIIC--AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESA 214
+GV +C + ES + + +AKNG+ LG A + KE +
Sbjct: 15 YGVSKGKVCFEMKNFESDEV-ELSYAKNGQDLGVAFKIS-------------KEILADRP 60
Query: 215 VFPHILLKNVVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCN-MKDCEVMMMV 272
+FPH+L N V F E+ P+ + + + + V GP KDCEV+MM+
Sbjct: 61 LFPHVLCHNCAVEFNFGQKEKPYFPIPEDYTLIQNVPLEDRVRGPKGPEEKKDCEVVMMI 120
Query: 273 GLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAI 332
GLP +GKTTW K ++P K Y +LGTN I+++M V G ++ + + L+ RA
Sbjct: 121 GLPGAGKTTWVTKHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQC 179
Query: 333 FDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
+ A+R RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+
Sbjct: 180 LGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKK 237
>gi|268534928|ref|XP_002632597.1| Hypothetical protein CBG23721 [Caenorhabditis briggsae]
Length = 1730
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 188/413 (45%), Gaps = 47/413 (11%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSSGLH--------QEGFAYCWSGARANVGIN----- 86
+++RV ++ +LD+ D +KS+ + Q+G A W G R+N GI
Sbjct: 990 EEERVPVDNDTIELDYYNADILVKSAEKNIWQIEPFCQDGLALMWGGIRSNFGIQLPFKQ 1049
Query: 87 -----GGKYCFGCKIVSTQPVDMEDTPPD---QQHVCRVGTSRGDDPVGKLGETEQSFGF 138
+ F +I + Q M+ P + ++ R+G S P+ LGE+ S+
Sbjct: 1050 TDKDKSHRLAFQIQIDAFQ--SMQHLPTEFMQEEGDVRMGFSLASTPLA-LGESSGSWCI 1106
Query: 139 GGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNG 198
TGK + +F F F VGD + C +DL +I + NG+ +GT F+
Sbjct: 1107 TATGKKASNNHFYEFTRAFLVGDCVTCILDLLE---GSISYQINGEDVGTP--FEKIPLR 1161
Query: 199 LGVVDSAVKERQCESAVFPHILLKN----VVVVMQFSVEQGLIPVEGYKSWVSALDDGNS 254
G + +FP I KN V + + S E+ + + +++ +D +
Sbjct: 1162 EGDI------------IFPTICTKNANINVNLGQELSDEKWKLSEDRDWMFITEMDRAHL 1209
Query: 255 VLGPTF-CNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLL 313
V T KDC V+M VGLP GKTTW +++ +HP + + L+ +++++ MKV G+
Sbjct: 1210 VRSHTAPAAKKDCTVLMTVGLPGVGKTTWVRRYLAEHPHEHWTLISADVVIDAMKVNGVP 1269
Query: 314 R-KHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKI 372
R + +R L G L+S A R +N+I+D TN RK+KL F F +
Sbjct: 1270 RIRLPTLKRPDFLRGIIGKSMSRLISLAPRRRKNYILDMTNCMADRRKKKLMGFEEFNRK 1329
Query: 373 AVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELF 425
++ P + R +K+ E +++ DAV A LP+ + +EL
Sbjct: 1330 CMIFVPDEDTHMKRLIKQEHEENEKLDTDAVMQYKAAMSLPIVAEGEPCEELI 1382
>gi|392901958|ref|NP_001255855.1| Protein Y41E3.11, isoform c [Caenorhabditis elegans]
gi|332078434|emb|CCA65644.1| Protein Y41E3.11, isoform c [Caenorhabditis elegans]
Length = 692
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 169/379 (44%), Gaps = 58/379 (15%)
Query: 76 WSGARANVGIN----------GGKYCFGCKIVSTQPVDMEDTPPDQQHV----------C 115
W G R+N GI + F +I S Q + QH+
Sbjct: 2 WGGIRSNFGIKLPFKQTGKDASHRLAFQIQIDSYQSI---------QHLPTEFMADGGDV 52
Query: 116 RVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLA 175
R+G S LGE+ S+ +GK + +F +FG+ F +GD + C DL +
Sbjct: 53 RIGFSLASTASLILGESPGSWCISASGKRAANNHFSDFGKLFDIGDVVTCIFDLS---VG 109
Query: 176 TIGFAKNGKWLGT---AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN----VVVVM 228
TI + NG+ +G+ + QF G +FP I KN V +
Sbjct: 110 TISYQINGENVGSPFESLQFREGD-----------------VIFPTICTKNANINVNMGQ 152
Query: 229 QFSVEQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPASGKTTWAEKWV 287
+ + E+ IP + +++ +D + V T KDC V+M VGLP GKTTW +++
Sbjct: 153 ELTDEKWKIPEDRDWMFITEMDRAHLVRSHTAPAAKKDCTVLMTVGLPGVGKTTWVRRYL 212
Query: 288 KDHPEKRYILLGTNLILEQMKVPGLLR-KHNYSERFQCLMGRANAIFDVLLSRASRTPRN 346
+HP + + L+ +++++ MKV G+ R + +R L G + L+ A R +N
Sbjct: 213 AEHPHEHWTLISADVVMDAMKVNGVPRIRLPTLKRPDFLRGIIGKSMNRLILLAPRRRKN 272
Query: 347 FIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNM 406
+I+D TN F RKRKL F F + ++ P + + R +K+ E +++ DA+
Sbjct: 273 YILDMTNCFAEKRKRKLMAFEEFNRKCMLFVPDEDTHQKRLIKQEHEENEKLDTDAMMQH 332
Query: 407 LANYVLPVNKDTPGSDELF 425
A LP+ + +EL
Sbjct: 333 KAAMSLPIVAEGEPCEELI 351
>gi|308463586|ref|XP_003094066.1| hypothetical protein CRE_17539 [Caenorhabditis remanei]
gi|308248632|gb|EFO92584.1| hypothetical protein CRE_17539 [Caenorhabditis remanei]
Length = 1818
Score = 124 bits (312), Expect = 8e-26, Method: Composition-based stats.
Identities = 112/405 (27%), Positives = 187/405 (46%), Gaps = 46/405 (11%)
Query: 48 PADCD---LDFDIEDNGLKSSGLH--------QEGFAYCWSGARANVGIN---------- 86
PAD D LD+ D +KS+ + Q+G A W G R+N GI
Sbjct: 1064 PADVDTIELDYYNADILVKSAEKNIWQIEPFCQDGLALMWGGIRSNFGIQLPFRQTDKDK 1123
Query: 87 GGKYCFGCKIVSTQPVDMEDTP-PDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFS 145
+ F +I + Q + T ++ R+G S P+ LGE S+ +GK +
Sbjct: 1124 SHRLAFQIQIDAYQSIQHLPTEFMNEGGDVRIGFSLASTPL-VLGENSGSWCITASGKRA 1182
Query: 146 HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSA 205
+F +FG+ F +GD + C +DL +I F NG+ +GT +
Sbjct: 1183 SNNHFYDFGKSFDIGDCVTCILDLLE---GSISFQINGEDVGTPFE-------------K 1226
Query: 206 VKERQCESAVFPHILLKNVVVVM----QFSVEQGLIPVEGYKSWVSALDDGNSVLGPTF- 260
V R+ + +FP I KN V + + S E+ + + +++ +D + V T
Sbjct: 1227 VPMREGD-LIFPTICTKNANVNVNLGQELSDEKWKLSEDRDWMFITEMDRAHLVRSQTAP 1285
Query: 261 CNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLR-KHNYS 319
KDC V+M VGLPA GKTTW +++ +HP + + L+ + +++ MKV G+ R +
Sbjct: 1286 AAKKDCTVLMTVGLPAVGKTTWVRRYLAEHPHEHWTLISADTVMDAMKVNGVPRIRLPTL 1345
Query: 320 ERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK 379
+R L G + L+ A R +N+I+D TN RK+KL F F + ++ P
Sbjct: 1346 KRPDFLRGIIGKSMNRLICLAPRRRKNYILDMTNCMADRRKKKLMGFEEFNRKCMIFVPD 1405
Query: 380 PEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDEL 424
+ + R +K+ E +++ DAV A+ LP+ + +EL
Sbjct: 1406 EDTHQKRLIKQEHEENEKLDTDAVMQYKASISLPIVAEGEPCEEL 1450
>gi|195487392|ref|XP_002091889.1| GE13899 [Drosophila yakuba]
gi|194177990|gb|EDW91601.1| GE13899 [Drosophila yakuba]
Length = 1273
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 114/200 (57%), Gaps = 26/200 (13%)
Query: 222 KNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGKT 280
++ V +++ V GL+PVE V GP + K+CEV+++VGLP +GKT
Sbjct: 673 RDTVALLEGYVLIGLVPVEKL------------VSGPQRVGSRKECEVILLVGLPGAGKT 720
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQ-----CLMGRANAIFDV 335
WA K V ++ +KRY L+G + + +M + G RK + R+ CL A A+ D+
Sbjct: 721 HWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLA-ALEDI 779
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
+ R RNFI+DQTNV+ SA++RK++ F +F++IAVV P ++LK R + +E G
Sbjct: 780 AMKRR----RNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELK-RRIAEKEEKG 834
Query: 396 K--EVPADAVNNMLANYVLP 413
V +NN+ AN+ LP
Sbjct: 835 NAFTVKESTINNLRANFTLP 854
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 292 PTIEENKVGLSWFDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVREGKVCFEVR 351
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + + D+ +V RVG S + LGE E SFG+ TG+ + F ++
Sbjct: 352 LSEESLPENSNYFRDEPNVRGFRVGFSMPQSSL-LLGEAEHSFGYCETGRKATQSEFTDY 410
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DLES+P TI + NG LG A +F+ G E
Sbjct: 411 GKPYQLDDVIGCYLDLESEPC-TINYTLNGDDLGVAFEFEKSILGE------------EG 457
Query: 214 AVFPHILLKNVVVVMQFS-VEQGLIPVE 240
A+FPHI+ K + FS EQ L+ E
Sbjct: 458 ALFPHIVTKGYEYSVNFSDTEQLLVNAE 485
>gi|28317128|gb|AAO39582.1| LD24631p, partial [Drosophila melanogaster]
Length = 739
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 26/200 (13%)
Query: 222 KNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGKT 280
++ +++ V GL+PVE V GP + K+CEV+++VGLP +GKT
Sbjct: 141 RDTAALLEGYVLIGLVPVEKL------------VSGPQRVGSRKECEVILLVGLPGAGKT 188
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQ-----CLMGRANAIFDV 335
WA K V ++ +KRY L+G + + +M + G RK + R+ CL A A+ D+
Sbjct: 189 HWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLA-ALEDI 247
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
+ R RNFI+DQTNV+ SA++RK++ F +F++IAVV P ++LK R + +E G
Sbjct: 248 AMKRR----RNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELK-RRIAEKEEKG 302
Query: 396 K--EVPADAVNNMLANYVLP 413
V +NN+ AN+ LP
Sbjct: 303 NAFTVKESTINNLRANFTLP 322
>gi|256773323|gb|ACV21075.1| GM15464p [Drosophila melanogaster]
Length = 1095
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 26/200 (13%)
Query: 222 KNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGKT 280
++ +++ V GL+PVE V GP + K+CEV+++VGLP +GKT
Sbjct: 497 RDTAALLEGYVLIGLVPVEKL------------VSGPQRVGSRKECEVILLVGLPGAGKT 544
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQ-----CLMGRANAIFDV 335
WA K V ++ +KRY L+G + + +M + G RK + R+ CL A A+ D+
Sbjct: 545 HWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLA-ALEDI 603
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
+ R RNFI+DQTNV+ SA++RK++ F +F++IAVV P ++LK R + +E G
Sbjct: 604 AMKRR----RNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELK-RRIAEKEEKG 658
Query: 396 K--EVPADAVNNMLANYVLP 413
V +NN+ AN+ LP
Sbjct: 659 NAFTVKESTINNLRANFTLP 678
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 116 PTIEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVREGKVCFEVR 175
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S + LGE E SFG+ TG+ + F ++
Sbjct: 176 LSEESVPENSHYFRDEPHVRGFRVGFSMPKSSL-LLGEAEHSFGYCETGRKATQSEFTDY 234
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DLES+P TI + NG+ LG A +F+ G E
Sbjct: 235 GKPYQLDDVIGCYLDLESEPC-TITYTLNGEDLGVAFEFEKSILGE------------EG 281
Query: 214 AVFPHILLKNVVVVMQFS-VEQGLIPVE 240
A+FPHI+ K + FS EQ L+ E
Sbjct: 282 ALFPHIVTKGYEYSVNFSDTEQLLVNAE 309
>gi|281363687|ref|NP_001163196.1| CG30122, isoform C [Drosophila melanogaster]
gi|272432550|gb|ACZ94468.1| CG30122, isoform C [Drosophila melanogaster]
Length = 1272
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 26/200 (13%)
Query: 222 KNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGKT 280
++ +++ V GL+PVE V GP + K+CEV+++VGLP +GKT
Sbjct: 674 RDTAALLEGYVLIGLVPVEKL------------VSGPQRVGSRKECEVILLVGLPGAGKT 721
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQ-----CLMGRANAIFDV 335
WA K V ++ +KRY L+G + + +M + G RK + R+ CL A A+ D+
Sbjct: 722 HWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLA-ALEDI 780
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
+ R RNFI+DQTNV+ SA++RK++ F +F++IAVV P ++LK R + +E G
Sbjct: 781 AMKRR----RNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELK-RRIAEKEEKG 835
Query: 396 K--EVPADAVNNMLANYVLP 413
V +NN+ AN+ LP
Sbjct: 836 NAFTVKESTINNLRANFTLP 855
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 103/208 (49%), Gaps = 18/208 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 293 PTIEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVREGKVCFEVR 352
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S + LGE E SFG+ TG+ + F ++
Sbjct: 353 LSEESVPENSHYFRDEPHVRGFRVGFSMPKSSL-LLGEAEHSFGYCETGRKATQSEFTDY 411
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DLES+P TI + NG+ LG A +F+ G E
Sbjct: 412 GKPYQLDDVIGCYLDLESEPC-TINYTLNGEDLGVAFEFEKSILGE------------EG 458
Query: 214 AVFPHILLKNVVVVMQFS-VEQGLIPVE 240
A+FPHI+ K ++ FS EQ L+ E
Sbjct: 459 ALFPHIVTKGYEYLVNFSDTEQLLVNAE 486
>gi|281363689|ref|NP_001163197.1| CG30122, isoform D [Drosophila melanogaster]
gi|157816402|gb|ABV82195.1| GH01011p [Drosophila melanogaster]
gi|272432551|gb|ACZ94469.1| CG30122, isoform D [Drosophila melanogaster]
Length = 1271
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 26/200 (13%)
Query: 222 KNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGKT 280
++ +++ V GL+PVE V GP + K+CEV+++VGLP +GKT
Sbjct: 674 RDTAALLEGYVLIGLVPVEKL------------VSGPQRVGSRKECEVILLVGLPGAGKT 721
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQ-----CLMGRANAIFDV 335
WA K V ++ +KRY L+G + + +M + G RK + R+ CL A A+ D+
Sbjct: 722 HWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLA-ALEDI 780
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
+ R RNFI+DQTNV+ SA++RK++ F +F++IAVV P ++LK R + +E G
Sbjct: 781 AMKRR----RNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELK-RRIAEKEEKG 835
Query: 396 K--EVPADAVNNMLANYVLP 413
V +NN+ AN+ LP
Sbjct: 836 NAFTVKESTINNLRANFTLP 855
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 103/208 (49%), Gaps = 18/208 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 293 PTIEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVREGKVCFEVR 352
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S + LGE E SFG+ TG+ + F ++
Sbjct: 353 LSEESVPENSHYFRDEPHVRGFRVGFSMPKSSL-LLGEAEHSFGYCETGRKATQSEFTDY 411
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DLES+P TI + NG+ LG A +F+ G E
Sbjct: 412 GKPYQLDDVIGCYLDLESEPC-TINYTLNGEDLGVAFEFEKSILGE------------EG 458
Query: 214 AVFPHILLKNVVVVMQFS-VEQGLIPVE 240
A+FPHI+ K ++ FS EQ L+ E
Sbjct: 459 ALFPHIVTKGYEYLVNFSDTEQLLVNAE 486
>gi|22024201|ref|NP_611354.2| CG30122, isoform B [Drosophila melanogaster]
gi|21626980|gb|AAF57660.2| CG30122, isoform B [Drosophila melanogaster]
Length = 1271
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 26/200 (13%)
Query: 222 KNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGKT 280
++ +++ V GL+PVE V GP + K+CEV+++VGLP +GKT
Sbjct: 674 RDTAALLEGYVLIGLVPVEKL------------VSGPQRVGSRKECEVILLVGLPGAGKT 721
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQ-----CLMGRANAIFDV 335
WA K V ++ +KRY L+G + + +M + G RK + R+ CL A A+ D+
Sbjct: 722 HWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLA-ALEDI 780
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMG 395
+ R RNFI+DQTNV+ SA++RK++ F +F++IAVV P ++LK R + +E G
Sbjct: 781 AMKRR----RNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELK-RRIAEKEEKG 835
Query: 396 K--EVPADAVNNMLANYVLP 413
V +NN+ AN+ LP
Sbjct: 836 NAFTVKESTINNLRANFTLP 855
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 103/208 (49%), Gaps = 18/208 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 293 PTIEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVREGKVCFEVR 352
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S + LGE E SFG+ TG+ + F ++
Sbjct: 353 LSEESVPENSHYFRDEPHVRGFRVGFSMPKSSL-LLGEAEHSFGYCETGRKATQSEFTDY 411
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DLES+P TI + NG+ LG A +F+ G E
Sbjct: 412 GKPYQLDDVIGCYLDLESEPC-TINYTLNGEDLGVAFEFEKSILGE------------EG 458
Query: 214 AVFPHILLKNVVVVMQFS-VEQGLIPVE 240
A+FPHI+ K ++ FS EQ L+ E
Sbjct: 459 ALFPHIVTKGYEYLVNFSDTEQLLVNAE 486
>gi|195584665|ref|XP_002082125.1| GD25377 [Drosophila simulans]
gi|194194134|gb|EDX07710.1| GD25377 [Drosophila simulans]
Length = 1267
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 26/187 (13%)
Query: 235 GLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGKTTWAEKWVKDHPEK 293
GL+PVE V GP + K+CEV+++VGLP +GKT WA K V ++ +K
Sbjct: 687 GLVPVEKL------------VSGPQRVGSRKECEVILLVGLPGAGKTHWAHKHVAENADK 734
Query: 294 RYILLGTNLILEQMKVPGLLRKHNYSERFQ-----CLMGRANAIFDVLLSRASRTPRNFI 348
RY L+G + + +M + G RK + R+ CL A A+ D+ + R RNFI
Sbjct: 735 RYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLA-ALEDIAMKRR----RNFI 789
Query: 349 IDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGK--EVPADAVNNM 406
+DQTNV+ SA++RK++ F +F++IAVV P ++LK R + +E G V +NN+
Sbjct: 790 LDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELK-RRIAEKEEKGNAFTVKESTINNL 848
Query: 407 LANYVLP 413
AN+ LP
Sbjct: 849 RANFTLP 855
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 293 PTIEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVREGKVCFEVR 352
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S + LGE E SFG+ TG+ + F ++
Sbjct: 353 LSEESVPENSHYFRDEPHVRGFRVGFSMPKSSL-LLGEAEHSFGYCETGRKATQSEFTDY 411
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DLES+P TI + NG+ LG A +F+ G E
Sbjct: 412 GKPYQLDDVIGCYLDLESEPC-TINYTLNGEDLGVAFEFEKSILGE------------EG 458
Query: 214 AVFPHILLKNVVVVMQFS-VEQGLIPVE 240
A+FPHI+ K + FS EQ L+ E
Sbjct: 459 ALFPHIVTKGYEYSVNFSDTEQLLVNAE 486
>gi|195335659|ref|XP_002034481.1| GM19891 [Drosophila sechellia]
gi|194126451|gb|EDW48494.1| GM19891 [Drosophila sechellia]
Length = 1269
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 26/187 (13%)
Query: 235 GLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVMMMVGLPASGKTTWAEKWVKDHPEK 293
GL+PVE V GP + K+CEV+++VGLP +GKT WA K V ++ +K
Sbjct: 687 GLVPVEKL------------VSGPQRVGSRKECEVILLVGLPGAGKTHWAHKHVAENADK 734
Query: 294 RYILLGTNLILEQMKVPGLLRKHNYSERFQ-----CLMGRANAIFDVLLSRASRTPRNFI 348
RY L+G + + +M + G RK + R+ CL A A+ D+ + R RNFI
Sbjct: 735 RYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLA-ALEDIAMKRR----RNFI 789
Query: 349 IDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGK--EVPADAVNNM 406
+DQTNV+ SA++RK++ F +F++IAVV P ++LK R + +E G V +NN+
Sbjct: 790 LDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELK-RRIAEKEEKGNAFTVKESTINNL 848
Query: 407 LANYVLP 413
AN+ LP
Sbjct: 849 RANFTLP 855
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 293 PTIEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVREGKVCFEVR 352
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S + LGE E SFG+ TG+ + F ++
Sbjct: 353 LSEESVPENSHYFRDEPHVRGFRVGFSMPKSSL-LLGEAEHSFGYCETGRKATQSEFTDY 411
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DLES+P TI + NG+ LG A +F+ G E
Sbjct: 412 GKPYQLDDVIGCYLDLESEPC-TINYTLNGEDLGVAFEFEKSILGE------------EG 458
Query: 214 AVFPHILLKNVVVVMQFS-VEQGLIPVE 240
A+FPHI+ K + FS EQ L+ E
Sbjct: 459 ALFPHIVTKGYEYSVNFSDTEQLLVNAE 486
>gi|341902547|gb|EGT58482.1| hypothetical protein CAEBREN_16106 [Caenorhabditis brenneri]
Length = 1875
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 185/406 (45%), Gaps = 68/406 (16%)
Query: 48 PADCD---LDFDIEDNGLKSSGLH--------QEGFAYCWSGARANVGIN---------- 86
PAD D LD+ D +KS+ + Q+G A W G R+N G+
Sbjct: 1112 PADNDTIELDYYNADILVKSAEKNIWQIEPFCQDGLALMWGGIRSNFGVKLPFKQTDKDK 1171
Query: 87 GGKYCFGCKIVSTQPVDMEDTPPDQQHV----------CRVGTSRGDDPVGKLGETEQSF 136
+ F +I + Q + QH+ R+G S P+ LGE S+
Sbjct: 1172 AHRLAFQIEIEAYQSI---------QHLPTEFMNDGGDVRIGFSVASTPLI-LGEYSGSW 1221
Query: 137 GFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGS 196
+GK + +F +FG+ F +GD + C +DL +I + NG+ +GT F+
Sbjct: 1222 CITASGKKASNNHFYDFGKTFDIGDCVTCVLDLLE---GSITYYINGEDVGTP--FEKIP 1276
Query: 197 NGLGVVDSAVKERQCESAVFPHILLKN----VVVVMQFSVEQGLIPVEGYKSWVSALDDG 252
G V ++P I +KN V + + S E+ I + +++ +D
Sbjct: 1277 VKEGDV------------IYPTICVKNSNVNVNLGQELSDEKWKISEDRDWMFITEMDRA 1324
Query: 253 N---SVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKV 309
+ S++ P KDC V+M VGLP GKTTW +++ +HP++ + L+ + +++ MKV
Sbjct: 1325 HLKRSLVAP--AAKKDCTVLMTVGLPGVGKTTWVNRYLSEHPDEDWTLISADSVMDAMKV 1382
Query: 310 PGLLR-KHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN 368
G+ R + +R L G + L A R +N+IID TN RK+KL F
Sbjct: 1383 NGVSRIRLPTLKRPDFLRGIIGKSMNRLCLLAPRRRKNYIIDMTNCLGDRRKKKLMGFEE 1442
Query: 369 FRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPV 414
F + ++ P ++ + R +++ ++ G+++ D+ A +P+
Sbjct: 1443 FNRKCMIFVPDEDEHQRRLMRQEQQEGEKLDTDSFMQYKAGMSIPI 1488
>gi|194881151|ref|XP_001974712.1| GG20960 [Drosophila erecta]
gi|190657899|gb|EDV55112.1| GG20960 [Drosophila erecta]
Length = 1272
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 14/167 (8%)
Query: 255 VLGPTFC-NMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLL 313
V GP + K+CEV+++VGLP +GKT WA+K V ++ +KRY L+G + + +M + G
Sbjct: 689 VSGPQRVGSRKECEVILLVGLPGAGKTHWAQKHVAENADKRYELIGPDAFISKMTIDGAS 748
Query: 314 RKHNYSERFQ-----CLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN 368
RK + R+ CL A A+ D+ + R RNFI+DQTNV+ SA++RK++ F +
Sbjct: 749 RKTVHKGRWDKVYEICLNSLA-ALEDIAMKRR----RNFILDQTNVYASAQRRKMKGFND 803
Query: 369 FRKIAVVVFPKPEDLKIRSVKRFKEMGK--EVPADAVNNMLANYVLP 413
F++IAVV P ++LK R + +E G V +NN+ AN+ LP
Sbjct: 804 FKRIAVVCIPSEDELK-RRIAEKEEKGNAFTVKESTINNLRANFTLP 849
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 287 PTIEENKVGLSWLDSDLHLRIDPTTFASAKPLSSEIYSLIWSGARANYGVREGKVCFEVR 346
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S + LGE E SFG+ TG+ + F ++
Sbjct: 347 LSEESLPENSHYFRDEPHVRGFRVGFSMPQSSL-LLGEAEHSFGYCETGRKATQSEFTDY 405
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DLES+P TI + NG+ LG A +F+ G E
Sbjct: 406 GKPYQLDDVIGCYLDLESEPC-TINYTLNGEDLGVAFEFEKSILGE------------EG 452
Query: 214 AVFPHILLKNVVVVMQFS-VEQGLIPVE 240
A+FPHI+ K + FS EQ L+ E
Sbjct: 453 ALFPHIVTKGYEYSVNFSDTEQLLVNAE 480
>gi|357623711|gb|EHJ74754.1| hypothetical protein KGM_07776 [Danaus plexippus]
Length = 1279
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 113/201 (56%), Gaps = 8/201 (3%)
Query: 218 HILLKNVVVVMQFSVEQGLIPVE-----GYKSWVSALDDGNSVLGPTFCNMKDCEVMMMV 272
H V ++ ++VE+ L E GY+ +++ D + P C+ +CEV++MV
Sbjct: 728 HSTQTQDVALLLYTVEEELDGPEASVLPGYE-FIAKGDLVDGPRRPGSCD--ECEVILMV 784
Query: 273 GLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAI 332
G+P SGKT WA++ +PEKRY +L T + ++MKV + Y ++ ++ +
Sbjct: 785 GMPGSGKTYWAKQHCAKNPEKRYNILSTGALFDRMKVDCKAFRTAYEGKWDAMVTKCAKC 844
Query: 333 FDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFK 392
LL A RNFI+DQTNV+ SA++RKLR F +R+IA VV ED + R+ R
Sbjct: 845 VVKLLEIAKGRRRNFILDQTNVYPSAQRRKLREFSGYRRIAAVVVVNEEDQRQRAAAREA 904
Query: 393 EMGKEVPADAVNNMLANYVLP 413
GKEVP A+ +M AN+ LP
Sbjct: 905 ADGKEVPDAAILDMKANFTLP 925
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 94/217 (43%), Gaps = 45/217 (20%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSS-GLHQEGFAYCWSGARANVGINGGKYCF--- 92
P +V L+ D DL+ +E L S L++ FAY W+GARA G+ G+ C+
Sbjct: 359 PELDDSKVTLSWYDSDLNQYLELPELNSVIPLNEGAFAYAWAGARATHGVTHGRLCYEPW 418
Query: 93 -----------------------GCKIVSTQPVDMEDTPPDQQHVC--RVGTSRGDDPVG 127
G + + P + PP R G S DD
Sbjct: 419 AYGYATPDPRATTFIPLSSVHEGGVLYLPSFPF-LTSFPPSLSFPTGLRAGWS-TDDTSL 476
Query: 128 KLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLG 187
LGE S+G+ TG+ + F +G++F D I C +DL+S P T+ + NG+ LG
Sbjct: 477 HLGENSLSWGYESTGRAVNNSEFKGYGKQFNEKDVIGCYLDLDSTP-CTMSYTLNGEELG 535
Query: 188 TAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNV 224
TA +FD KE AVFPH+L KN+
Sbjct: 536 TAFEFD-------------KEILEGRAVFPHVLTKNM 559
>gi|195430798|ref|XP_002063435.1| GK21907 [Drosophila willistoni]
gi|194159520|gb|EDW74421.1| GK21907 [Drosophila willistoni]
Length = 1276
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 99/166 (59%), Gaps = 12/166 (7%)
Query: 255 VLGPTFC-NMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLL 313
+LGP + K+CEV+++VGLP SGKT W + V ++P KRY ++G + I+ +M + G
Sbjct: 672 ILGPQRAESRKECEVILLVGLPGSGKTHWTQNHVSENPAKRYEVIGPDSIIAKMTIDGAS 731
Query: 314 RKHNYSER----FQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF 369
RK + R ++ + + D+ + R RNFI+DQTN + SA++RK++ F +F
Sbjct: 732 RKTVHKGRWDKVYEICLNSLGGLEDIAMKRR----RNFILDQTNAYASAQRRKMKGFSDF 787
Query: 370 RKIAVVVFPKPEDLKIRSVKRFKEMGK--EVPADAVNNMLANYVLP 413
++IAVV P ++LK R + +E G V +NN+ AN+ LP
Sbjct: 788 KRIAVVCIPSEDELK-RRIADKEEKGNAFTVKESTINNLRANFTLP 832
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P + +V L+ D DL I+ S+ L+ E ++ WSGARAN G+ GK CF +
Sbjct: 277 PTIDENKVGLSWFDSDLHLRIDSTSFASAKPLNSEIYSLIWSGARANYGVRQGKVCFEVR 336
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S+ + LGE E SFG+ +G+ ++ F ++
Sbjct: 337 LSEESVPENSHHFRDESHVRGFRVGFSKPQSTL-LLGEAEHSFGYCESGRKANQSEFTDY 395
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DLES+P TI + NG+ LG A +F+ G E
Sbjct: 396 GKPYQLDDVIGCYLDLESEPC-TIKYTLNGEDLGVAFEFEKSILGE------------ED 442
Query: 214 AVFPHILLKNVVVVMQFSVEQGLI 237
A++PHIL K + F + L+
Sbjct: 443 ALYPHILTKGYEYAVNFENAEELL 466
>gi|345313158|ref|XP_001514721.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like, partial [Ornithorhynchus anatinus]
Length = 378
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 48 PADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDT 107
P +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 120 PNNCDLHFKVARDRCSGYPLTIEGFAYLWSGARASYGVQRGRVCFEMKINEEISVKHLPA 179
Query: 108 PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAI 167
HV R+G S D +LGE S+G+GGTGK S F N+GE F D I C +
Sbjct: 180 SEPDPHVVRIGWSL-DSCSTQLGEEAFSYGYGGTGKKSTNCKFENYGETFAENDVIGCFV 238
Query: 168 DLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVV 227
D E + F KNGKWLG A + KE A+FPH+L+KN +
Sbjct: 239 DFECGNDVEMSFTKNGKWLGIAYRL-------------RKETLGGRALFPHVLVKNCAIE 285
Query: 228 MQF-SVEQGLIPVEGYKSWVSALDDGNSVLG 257
F + PV +++ L G V G
Sbjct: 286 FNFGQRDTTYCPVPPGFTFIQHLPLGERVRG 316
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 339 RASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEV 398
R + P++ +TNV+ SA++RK+R F F++ A+V+ P EDLK R+++R E GK+V
Sbjct: 315 RGAVGPKSKAECETNVYGSAQRRKMRPFEGFQRKAIVICPSDEDLKDRTIRRTDEEGKDV 374
Query: 399 PADA 402
P A
Sbjct: 375 PDHA 378
>gi|194754715|ref|XP_001959640.1| GF11942 [Drosophila ananassae]
gi|190620938|gb|EDV36462.1| GF11942 [Drosophila ananassae]
Length = 1241
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 100/166 (60%), Gaps = 12/166 (7%)
Query: 255 VLGPTFC-NMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLL 313
V GP + K+CEV+++VGLP +GKT W K + ++P+KRY ++G + + +M + G
Sbjct: 664 VAGPQRAESRKECEVILLVGLPGAGKTHWTLKHIAENPDKRYDVIGPDSFIARMTIDGAS 723
Query: 314 RKHNYSER----FQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF 369
RK + R ++ + A+ D+ + R RNFI+DQTNV+ SA++RK++ F +F
Sbjct: 724 RKTVHKGRWDKVYETCLNSLGALEDIAMKRR----RNFILDQTNVYASAQRRKMKGFSDF 779
Query: 370 RKIAVVVFPKPEDLKIRSVKRFKEMGK--EVPADAVNNMLANYVLP 413
++IAVV P ++LK R + +E G V +NN+ AN+ LP
Sbjct: 780 KRIAVVCVPSEDELK-RRIAEKEEKGNAFTVKESTINNLRANFTLP 824
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 276 PAIEENKVGLSWVDSDLHLRIDPTTFASAKPLSSEIYSLIWSGARANFGVREGKVCFEVR 335
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S + LGE E SFG+ TG+ ++ G F ++
Sbjct: 336 LSEESQPENSHHFRDEPHVRGFRVGFSTSKSSL-LLGEAEHSFGYCETGRKANQGEFSDY 394
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ F + D + C +DLES+P +TI + NG+ LG A +FD G E
Sbjct: 395 GKPFQLDDVVGCYLDLESEP-STIQYTLNGEDLGVAFEFDKSILGE------------EQ 441
Query: 214 AVFPHILLKNVVVVMQFS-VEQGLIPVE 240
A++PHIL K + FS EQ L+ E
Sbjct: 442 ALYPHILTKGYEFSVNFSDTEQLLVNAE 469
>gi|198458868|ref|XP_001361184.2| GA24297 [Drosophila pseudoobscura pseudoobscura]
gi|198136503|gb|EAL25761.2| GA24297 [Drosophila pseudoobscura pseudoobscura]
Length = 1287
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 99/166 (59%), Gaps = 12/166 (7%)
Query: 255 VLGPTFC-NMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLL 313
+ GP + K+CEV+++VGLP +GKT W K V D+ +KRY ++G + I+ +M + G
Sbjct: 685 IAGPQRAGSRKECEVILLVGLPGAGKTHWTHKQVADNADKRYEVIGPDSIIAKMTIDGAS 744
Query: 314 RKHNYSERF----QCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF 369
RK + R+ + + A+ D+ + R RNFI+DQTN + SA++RK++ F +F
Sbjct: 745 RKTVHKGRWDKVLEICLNSLGALEDIAMKRR----RNFILDQTNAYASAQRRKMKGFNDF 800
Query: 370 RKIAVVVFPKPEDLKIRSVKRFKEMGK--EVPADAVNNMLANYVLP 413
++IAVV P ++LK R + +E G V +NN+ AN+ LP
Sbjct: 801 KRIAVVCIPGEDELK-RRIAEKEEKGNAFTVKESTINNLRANFTLP 845
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 32/215 (14%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 278 PTIEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVRDGKVCFEVR 337
Query: 96 IVSTQPVDMEDTPPDQQHVCR---------VGTSRGDDPVGKLGETEQSFGFGGTGKFSH 146
+ E++ P+ H R VG S+ + LGE E SFG+ TG+ ++
Sbjct: 338 LA-------EESQPENSHHFRDEPYVRGFRVGFSKSTTSL-LLGEAEHSFGYCETGRKAN 389
Query: 147 GGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAV 206
G F+++G+ + + D I C +DLES+P TI + NG+ LG A +F+ G G
Sbjct: 390 EGEFVDYGKPYQLDDVIGCYLDLESEPC-TIKYTLNGEDLGVAFEFEKGILGE------- 441
Query: 207 KERQCESAVFPHILLKNVVVVMQFSV-EQGLIPVE 240
E A+FPHI+ K + FS EQ L+ E
Sbjct: 442 -----EEALFPHIVTKGYEYTVNFSDGEQLLVNAE 471
>gi|195154955|ref|XP_002018378.1| GL16796 [Drosophila persimilis]
gi|194114174|gb|EDW36217.1| GL16796 [Drosophila persimilis]
Length = 1015
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 99/166 (59%), Gaps = 12/166 (7%)
Query: 255 VLGPTFC-NMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLL 313
+ GP + K+CEV+++VGLP +GKT W K V D+ +KRY ++G + I+ +M + G
Sbjct: 685 IAGPQRAGSRKECEVILLVGLPGAGKTHWTHKQVADNADKRYEVIGPDSIIAKMTIDGAS 744
Query: 314 RKHNYSERF----QCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF 369
RK + R+ + + A+ D+ + R RNFI+DQTN + SA++RK++ F +F
Sbjct: 745 RKTVHKGRWDKVLEICLNSLGALEDIAMKRR----RNFILDQTNAYASAQRRKMKGFNDF 800
Query: 370 RKIAVVVFPKPEDLKIRSVKRFKEMGK--EVPADAVNNMLANYVLP 413
++IAVV P ++LK R + +E G V +NN+ AN+ LP
Sbjct: 801 KRIAVVCIPGEDELK-RRIAEKEEKGNAFTVKESTINNLRANFTLP 845
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 32/215 (14%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 278 PTIEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGVRDGKVCFEVR 337
Query: 96 IVSTQPVDMEDTPPDQQHVCR---------VGTSRGDDPVGKLGETEQSFGFGGTGKFSH 146
+ E++ P+ H R VG S+ + LGE E SFG+ TG+ ++
Sbjct: 338 LA-------EESQPENSHHFRDEPYVRGFRVGFSKSTTSL-LLGEAEHSFGYCETGRKAN 389
Query: 147 GGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAV 206
G F+++G+ + + D I C +DLES+P TI + NG+ LG A +F+ G G
Sbjct: 390 EGEFVDYGKPYQLDDVIGCYLDLESEPC-TIKYTLNGEDLGVAFEFEKGILGE------- 441
Query: 207 KERQCESAVFPHILLKNVVVVMQFSV-EQGLIPVE 240
E A+FPHI+ K + FS EQ L+ E
Sbjct: 442 -----EEALFPHIVTKGYEYTVNFSDGEQLLVNAE 471
>gi|170046226|ref|XP_001850675.1| ribonucleoprotein [Culex quinquefasciatus]
gi|167869061|gb|EDS32444.1| ribonucleoprotein [Culex quinquefasciatus]
Length = 1200
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 245 WVSALDDGNSVLGPTFCNMK-DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLI 303
+++A+D N V G + +CEV+ M+G+P+SGKT W + ++ ++P+KRY +L + +
Sbjct: 607 YIAAIDKENLVEGIARPESRGECEVIFMIGMPSSGKTHWVKNYLAENPDKRYTVLSVDSL 666
Query: 304 LEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKL 363
L QMKV G R + + ++ L+ + L A++ RNFI+DQTN F S +KR+L
Sbjct: 667 LSQMKVSGKPRLPSNTGKWPKLVDTLAKNLNKLNEAAAKRRRNFILDQTNTFASEQKRRL 726
Query: 364 RLFVNF-RKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPV 414
R+F F + A+VV P E+ R ++ G EVP VN M A+ LP
Sbjct: 727 RVFGGFAARRAIVVIPDEEEYNRRLKQKQDTYGVEVPEGQVNVMKAHCYLPT 778
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 21/230 (9%)
Query: 12 DGDKPESVVKKAKVDDPVSDSSAS-GPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQE 70
D + +S K K P+ SS P + L+ D L+ +I N ++ +
Sbjct: 301 DAENKDSNNKPKKAPTPIEFSSEEMEPEIDGGKFGLSWIDSHLNLEINPNSFDTAKPLSD 360
Query: 71 G-FAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKL 129
G A W+GARAN+G+ GK + + T + + T R G S + + L
Sbjct: 361 GALAMAWAGARANLGVRKGKVAYEVLLTHTNAM-HKVTEELVTAEFRTGWSTTEADL-LL 418
Query: 130 GETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
GE++ SF +G G+ + F ++G ++ V D + +DLES P I + NG G A
Sbjct: 419 GESKHSFAYGSDGQKATDCTFTDYGAQYKVNDVLGVYLDLESTPCK-IEYTLNGASQGVA 477
Query: 190 KQFD-AGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLI 237
+F+ A NG A+FPH+ KN+ + F +E+ L+
Sbjct: 478 FEFELADLNG--------------QAMFPHVYSKNIAFKVNFGQLERSLL 513
>gi|158287055|ref|XP_309097.4| AGAP005305-PA [Anopheles gambiae str. PEST]
gi|157019831|gb|EAA04826.4| AGAP005305-PA [Anopheles gambiae str. PEST]
Length = 1032
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CE++MM+GLP SGKTTW + ++K++ + + LL + +LE MKV G R+ + + ++Q +
Sbjct: 686 CELVMMIGLPGSGKTTWVQNYLKENADTSFTLLSIDSLLENMKVEGKAREPSNTPQWQKV 745
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFR-KIAVVVFPKPEDLK 384
+ + + L+ A + R+ +IDQTNVF S +KR+L+ F F+ + A+ V P E+ K
Sbjct: 746 VEQLSRNMARLIEIACKRRRHILIDQTNVFASEQKRRLKGFGGFKTRRAIAVIPNLEEYK 805
Query: 385 IRSVKRFKEMGKEVPADAVNNMLANYVLPV 414
R ++ + G EVP +N M AN +P
Sbjct: 806 RRYEQKVAKYGAEVPETTLNTMKANIFVPT 835
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 50 DCDLDFDIEDNGLKSSGLHQEG-FAYCWSGARANVGINGGKYCFGCKIVST-QPVDMEDT 107
D DL+ I+D L S+ +G F W+G RA G+ GGK + +V QP
Sbjct: 385 DSDLNLAIDDKDLLSAKPLSDGIFGLVWAGVRAGRGVTGGKVLYEVLVVDELQPATKSPL 444
Query: 108 PPDQQHVC---RVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTII 164
PD + R+G S + +LGET+ SFG+ GK GGNF +G+ +G GD +
Sbjct: 445 VPDGETPTAEMRIGWSTAMEGKRQLGETDHSFGYSSCGKKVVGGNFEEYGKPYGKGDVVG 504
Query: 165 CAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNV 224
+DL++ P + F N G A +F+ S +D A+FPH+ KN+
Sbjct: 505 VYLDLDATPCC-MQFTVNRVRQGNAFEFEKDS-----LDG--------KALFPHVYAKNL 550
Query: 225 VVVMQF-SVEQGLIPVEGYK 243
+ F +VE GL VE K
Sbjct: 551 SFKVNFGTVEDGLPLVEKKK 570
>gi|195123005|ref|XP_002006000.1| GI18786 [Drosophila mojavensis]
gi|193911068|gb|EDW09935.1| GI18786 [Drosophila mojavensis]
Length = 1324
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 109/199 (54%), Gaps = 24/199 (12%)
Query: 222 KNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTF-CNMKDCEVMMMVGLPASGKT 280
++ V ++ V L+P+E V GP + K+CEV+++VGLP +GKT
Sbjct: 693 RDTVALLPGYVLLALVPIEQL------------VPGPQRPASRKECEVILLVGLPGAGKT 740
Query: 281 TWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSER----FQCLMGRANAIFDVL 336
W K V ++ +KRY ++G + I+ +M + G RK + R ++ + + D+
Sbjct: 741 HWTLKHVAENADKRYEVIGPDSIIAKMTIDGESRKTVHKGRWDKVYEICLNSLGGLEDIA 800
Query: 337 LSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGK 396
+ R RNFI+DQTN + SA++RK++ F +F++IAVV P ++LK R + +E G
Sbjct: 801 MKRR----RNFILDQTNAYASAQRRKMKGFSDFKRIAVVCIPGEDELK-RRIADKEEKGN 855
Query: 397 --EVPADAVNNMLANYVLP 413
V +NN+ AN+ LP
Sbjct: 856 AFTVKESTINNLRANFTLP 874
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D D+ I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 299 PTIEENKVGLSWFDSDIHLVIDSTNFTSAKPLAPEIYSLIWSGARANYGVREGKVCFEVQ 358
Query: 96 ----IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGN 149
IV D P HV RVG S + LGE E S+G+ +G+ ++ G
Sbjct: 359 LSEEIVPENAHHFRDEP----HVRGFRVGFSTPQSSL-LLGEAEHSYGYCESGRKANNGE 413
Query: 150 FLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKER 209
F ++G+ + + D I C +DLES P I + NG+ LG A +F+ S G
Sbjct: 414 FKDYGKPYQLDDVIGCYLDLESTPC-NIRYTLNGEDLGIAHEFEKSSLGE---------- 462
Query: 210 QCESAVFPHILLKNVVVVMQFSVEQGLI 237
+ A+FPHI+ K + FS + L+
Sbjct: 463 --DGALFPHIVTKGYEYTVNFSNAEELL 488
>gi|157128348|ref|XP_001661413.1| ribonucleoprotein [Aedes aegypti]
gi|108872622|gb|EAT36847.1| AAEL011089-PC [Aedes aegypti]
Length = 991
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 264 KDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQ 323
KDCE++ ++G+PASGKT W ++K++ +K+ LL + +L+QMK+ G RK ++++
Sbjct: 623 KDCELIFLIGMPASGKTHWVTNYLKENADKKITLLSVHSLLDQMKLAGEPRKPQNTKKWS 682
Query: 324 CLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPED 382
L+ + + + L AS+ RN+I DQTNVF S +KRKLR F F + AV+V P +
Sbjct: 683 RLVDQLSKSLNKLSDIASKRRRNYIFDQTNVFPSEQKRKLRGFGEFAARKAVIVVPDEAE 742
Query: 383 LKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ R + + G EVP +N M A++ +P
Sbjct: 743 HERRIKLKNEVFGVEVPESHLNVMKAHFHIP 773
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 39/247 (15%)
Query: 4 AKRELELPDGDKPESV--VKKAKVD-DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDN 60
AKR+ P + P +K A+ D + V++ + P +V+L+ D DL+ +I+
Sbjct: 272 AKRKSSSPTKETPSKTPRIKPAQTDIEFVAEENE--PEIDNSKVLLSWFDSDLNLEIDPK 329
Query: 61 GLKSSGLHQEG-FAYCWSGARANVGINGGKYCFGC--------KIVSTQPVDMEDTPPDQ 111
++ +G A W+G RAN+G+ GK F + V+ +PV E
Sbjct: 330 TFDTAKPISDGALALLWAGVRANMGVTKGKVAFEVILTKTNEMRKVTEEPVTSE------ 383
Query: 112 QHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLES 171
RVG S D + +LGE + SF + T F +G ++ + D I +DLES
Sbjct: 384 ---FRVGWSTADTSL-QLGEAKHSFAYSSTATKGTDSKFSEYGTEYKMNDVIGVYLDLES 439
Query: 172 KPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF- 230
P I + N GTA +F+ K A+FPHI +N+ + F
Sbjct: 440 SPCK-IEYTVNNVSQGTAFEFE-------------KAELEGKAMFPHICSRNIAFKVNFG 485
Query: 231 SVEQGLI 237
+E+ L+
Sbjct: 486 QLERSLL 492
>gi|157128350|ref|XP_001661414.1| ribonucleoprotein [Aedes aegypti]
gi|108872623|gb|EAT36848.1| AAEL011089-PA [Aedes aegypti]
Length = 999
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 264 KDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQ 323
KDCE++ ++G+PASGKT W ++K++ +K+ LL + +L+QMK+ G RK ++++
Sbjct: 623 KDCELIFLIGMPASGKTHWVTNYLKENADKKITLLSVHSLLDQMKLAGEPRKPQNTKKWS 682
Query: 324 CLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPED 382
L+ + + + L AS+ RN+I DQTNVF S +KRKLR F F + AV+V P +
Sbjct: 683 RLVDQLSKSLNKLSDIASKRRRNYIFDQTNVFPSEQKRKLRGFGEFAARKAVIVVPDEAE 742
Query: 383 LKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ R + + G EVP +N M A++ +P
Sbjct: 743 HERRIKLKNEVFGVEVPESHLNVMKAHFHIP 773
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 39/247 (15%)
Query: 4 AKRELELPDGDKPESV--VKKAKVD-DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDN 60
AKR+ P + P +K A+ D + V++ + P +V+L+ D DL+ +I+
Sbjct: 272 AKRKSSSPTKETPSKTPRIKPAQTDIEFVAEENE--PEIDNSKVLLSWFDSDLNLEIDPK 329
Query: 61 GLKSSGLHQEG-FAYCWSGARANVGINGGKYCFGC--------KIVSTQPVDMEDTPPDQ 111
++ +G A W+G RAN+G+ GK F + V+ +PV E
Sbjct: 330 TFDTAKPISDGALALLWAGVRANMGVTKGKVAFEVILTKTNEMRKVTEEPVTSE------ 383
Query: 112 QHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLES 171
RVG S D + +LGE + SF + T F +G ++ + D I +DLES
Sbjct: 384 ---FRVGWSTADTSL-QLGEAKHSFAYSSTATKGTDSKFSEYGTEYKMNDVIGVYLDLES 439
Query: 172 KPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF- 230
P I + N GTA +F+ K A+FPHI +N+ + F
Sbjct: 440 SPCK-IEYTVNNVSQGTAFEFE-------------KAELEGKAMFPHICSRNIAFKVNFG 485
Query: 231 SVEQGLI 237
+E+ L+
Sbjct: 486 QLERSLL 492
>gi|157128352|ref|XP_001661415.1| ribonucleoprotein [Aedes aegypti]
gi|108872624|gb|EAT36849.1| AAEL011089-PB [Aedes aegypti]
Length = 952
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 99/165 (60%), Gaps = 6/165 (3%)
Query: 253 NSVLGPTFC---NMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKV 309
N VLG C + KDCE++ ++G+PASGKT W ++K++ +K+ LL + +L+QMK+
Sbjct: 611 NLVLG--VCRPESRKDCELIFLIGMPASGKTHWVTNYLKENADKKITLLSVHSLLDQMKL 668
Query: 310 PGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF 369
G RK ++++ L+ + + + L AS+ RN+I DQTNVF S +KRKLR F F
Sbjct: 669 AGEPRKPQNTKKWSRLVDQLSKSLNKLSDIASKRRRNYIFDQTNVFPSEQKRKLRGFGEF 728
Query: 370 -RKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ AV+V P + + R + + G EVP +N M A++ +P
Sbjct: 729 AARKAVIVVPDEAEHERRIKLKNEVFGVEVPESHLNVMKAHFHIP 773
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 39/247 (15%)
Query: 4 AKRELELPDGDKPESV--VKKAKVD-DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDN 60
AKR+ P + P +K A+ D + V++ + P +V+L+ D DL+ +I+
Sbjct: 272 AKRKSSSPTKETPSKTPRIKPAQTDIEFVAEENE--PEIDNSKVLLSWFDSDLNLEIDPK 329
Query: 61 GLKSSGLHQEG-FAYCWSGARANVGINGGKYCFGC--------KIVSTQPVDMEDTPPDQ 111
++ +G A W+G RAN+G+ GK F + V+ +PV E
Sbjct: 330 TFDTAKPISDGALALLWAGVRANMGVTKGKVAFEVILTKTNEMRKVTEEPVTSE------ 383
Query: 112 QHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLES 171
RVG S D + +LGE + SF + T F +G ++ + D I +DLES
Sbjct: 384 ---FRVGWSTADTSL-QLGEAKHSFAYSSTATKGTDSKFSEYGTEYKMNDVIGVYLDLES 439
Query: 172 KPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF- 230
P I + N GTA +F+ K A+FPHI +N+ + F
Sbjct: 440 SPCK-IEYTVNNVSQGTAFEFE-------------KAELEGKAMFPHICSRNIAFKVNFG 485
Query: 231 SVEQGLI 237
+E+ L+
Sbjct: 486 QLERSLL 492
>gi|326430103|gb|EGD75673.1| hypothetical protein PTSG_07792 [Salpingoeca sp. ATCC 50818]
Length = 1114
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 159/374 (42%), Gaps = 87/374 (23%)
Query: 71 GFAYCWSGARANVGINGG--KYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTS-------R 121
GF + W+GAR ++GI GG +Y + + ++ P D RVG S
Sbjct: 394 GFRWLWTGARLSLGIFGGGTRYHYKTLVKDLPANSVKAGPVD----VRVGLSFERANLLV 449
Query: 122 GDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESK--------- 172
GDD G + + +G H G + +G + D I C +D+ +
Sbjct: 450 GDDTFG--------WAYCSSGSKIHNGERVKYGTPYHTNDEIECRLDVVTTTCPLVPSVN 501
Query: 173 -----PLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVV 227
PL I F KNG + G A Q DA + +AVF H+ L+N V+
Sbjct: 502 REGQPPLLVISFYKNGDFQGVAYQLDAST--------------VPAAVFGHVALRNCRVL 547
Query: 228 MQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWV 287
A+++ N D V +VGLP SGKT W ++
Sbjct: 548 --------------------AINE---------VNHPDPSVGFLVGLPGSGKTEWLSSFL 578
Query: 288 KDH----PEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRT 343
+ + Y+L +I E L ++NY E + ++A+F L+ A++
Sbjct: 579 QAQQSTGTDNFYVLSTEAIIQELAHNDPDLPEYNYRESWLRYCRTSSAMFRHLIPLAAQE 638
Query: 344 PRNFIIDQTNVFKSARKRKLRLF----VNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVP 399
R FI+DQTN + AR+RK++ F + F+ A++ ED+ +++ + GK +P
Sbjct: 639 RRFFIVDQTNTSRFARQRKMQPFKDSEIPFKIRAMLFLRTAEDI-AGTLQAKENAGKLIP 697
Query: 400 ADAVNNMLANYVLP 413
AV +M+ N++ P
Sbjct: 698 KAAVLHMMKNFIPP 711
>gi|195028785|ref|XP_001987256.1| GH20069 [Drosophila grimshawi]
gi|193903256|gb|EDW02123.1| GH20069 [Drosophila grimshawi]
Length = 1389
Score = 103 bits (258), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/155 (36%), Positives = 94/155 (60%), Gaps = 9/155 (5%)
Query: 264 KDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSER-- 321
K+CEV+++VGLP SGKT W + + ++ +KRY ++G + I+ +M + G RK + R
Sbjct: 737 KECEVILLVGLPGSGKTHWTQNHLSENSDKRYDIIGPDSIIAKMTIDGESRKTVHKGRWE 796
Query: 322 --FQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK 379
++ + A+ D+ + R RNFI+DQTN + SA++RK++ F +F++IAVV P
Sbjct: 797 KVYEICLNSLGALEDIAMKRR----RNFILDQTNAYASAQRRKMKGFSDFKRIAVVCIPG 852
Query: 380 PEDLKIR-SVKRFKEMGKEVPADAVNNMLANYVLP 413
++LK R +V K V +NN+ AN+ LP
Sbjct: 853 EDELKRRIAVNEEKGNAFTVKESTLNNLRANFTLP 887
Score = 88.6 bits (218), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P + +++ L+ D DL I+ S+ L E ++ WSGARAN G+ GK CF +
Sbjct: 300 PTMEDKQMGLSWLDSDLHLRIDATSFTSAKPLDSEIYSLVWSGARANYGVREGKVCFEVQ 359
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S + LGE E S+G+ +G+ ++ G F ++
Sbjct: 360 LSEESVPENAHHFRDEPHVRGFRVGFSTPQSSL-LLGEAEHSYGYCESGRKANNGEFRDY 418
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DL+S+P I + NG+ LG A +FD G E
Sbjct: 419 GKAYQLDDVIGCYLDLDSEP-CNIKYTLNGEDLGIAHEFDKSILGE------------EG 465
Query: 214 AVFPHILLKNVVVVMQFSVEQGLI 237
A+FPHIL K + F E L+
Sbjct: 466 ALFPHILTKGYQYTVNFGNETELL 489
>gi|195382251|ref|XP_002049844.1| GJ21813 [Drosophila virilis]
gi|194144641|gb|EDW61037.1| GJ21813 [Drosophila virilis]
Length = 1073
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 94/159 (59%), Gaps = 12/159 (7%)
Query: 255 VLGPT-FCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLL 313
V GP + K+CEV+++VGLP +GKT W +K V ++ +KRY ++G + I+ +M + G
Sbjct: 695 VSGPQCAASRKECEVILLVGLPGAGKTHWTQKHVAENVDKRYEIIGPDSIIAKMTIDGES 754
Query: 314 RKHNYSER----FQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF 369
RK + R ++ + + D+ + R RNFI+DQTN + SA++RK++ F +F
Sbjct: 755 RKTVHKGRWDKVYEICLNSLGGLEDIAMKRR----RNFILDQTNAYASAQRRKMKGFSDF 810
Query: 370 RKIAVVVFPKPEDLKIRSVKRFKEMGK--EVPADAVNNM 406
++IAVV P ++LK R + +E G V +NN+
Sbjct: 811 KRIAVVCIPGEDELK-RRIAEKEEKGNAFTVKESTINNL 848
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCK 95
P ++ +V L+ D DL I+ S+ L+ E ++ WSGARAN G+ GK CF +
Sbjct: 279 PTMEENQVGLSWFDSDLHLRIDATTFTSAKPLNSEIYSLIWSGARANYGVREGKVCFEVQ 338
Query: 96 IVSTQPVDMEDTPPDQQHV--CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
+ + D+ HV RVG S P+ LGE E S+G+ +G+ ++ G F ++
Sbjct: 339 LSEESVPENSHHFRDEPHVRGFRVGFSTPQTPM-LLGEAEHSYGYCESGRKANNGEFKDY 397
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G+ + + D I C +DL+S P I + NG+ LG A +FD G E
Sbjct: 398 GKPYQLDDVIGCYLDLDSTPC-NIKYTLNGEDLGIAHEFDKSILGE------------EG 444
Query: 214 AVFPHILLKNVVVVMQFSVEQGLI 237
A+FPHIL K + F+ + L+
Sbjct: 445 ALFPHILTKGYEYTVNFANNEELL 468
>gi|240980141|ref|XP_002403423.1| E1b-55kD-associated protein, putative [Ixodes scapularis]
gi|215491349|gb|EEC00990.1| E1b-55kD-associated protein, putative [Ixodes scapularis]
Length = 368
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 50 DCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPP 109
+ DL+ I + Q GF W+GARA G+ GK C+ KI Q D+ P
Sbjct: 161 NSDLNLSIGKERFSAEPFSQLGFGLMWAGARATYGVLKGKVCYETKITKYQ--DVSHLPS 218
Query: 110 DQQ--HVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAI 167
D+ +V RVG S + +LGE S+G+GGTGK S F ++GE FG GD I+ +
Sbjct: 219 DEPTPNVARVGFSTESTSM-QLGEEPLSYGYGGTGKISVDCKFKDYGEPFGEGDVILGLV 277
Query: 168 DLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVV 227
D++S P+ + FAKNGK LG A F+ LG A+FPH+L KN
Sbjct: 278 DMDSDPV-RMSFAKNGKDLGVA--FEVAKATLG-----------GQALFPHVLSKNCSFE 323
Query: 228 MQF 230
+ F
Sbjct: 324 VNF 326
>gi|355694940|gb|AER99838.1| heteroproteinous nuclear ribonucleoprotein U [Mustela putorius
furo]
Length = 233
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 105/228 (46%), Gaps = 17/228 (7%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ +CDL F I + L +S L E FA+ W+G RA+ G+ GK CF K+ PV
Sbjct: 21 VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVTKGKVCFEMKVTEKIPVR 80
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T H R+G S + LGE E S+G+ G + ++GEKF D I
Sbjct: 81 HLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVI 139
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C + ES + + +AKNG+ LG A + KE +FPH+L N
Sbjct: 140 TCFANFESDEVE-LSYAKNGQDLGVAFKIS-------------KEILAGRPLFPHVLCHN 185
Query: 224 VVVVMQF-SVEQGLIPVEGYKSWVSALDDGNSVLGPTFC-NMKDCEVM 269
V F E+ +P+ +++ + + V GP KDCEV+
Sbjct: 186 CAVEFNFGQKEKPYLPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVV 233
>gi|363746971|ref|XP_003643871.1| PREDICTED: nuclear calmodulin-binding protein, partial [Gallus
gallus]
Length = 137
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 77/136 (56%)
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRAN 330
MVGLP SGKT WA+K ++ EKRY +LGT L+L QM+ G + ++ L+ +A
Sbjct: 1 MVGLPGSGKTQWAQKHSAENQEKRYNILGTELVLHQMRTRGPEVEELDAKSKDLLIQQAA 60
Query: 331 AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKR 390
L+ A R RNFI+DQ NV+ S ++RKL F F + VVV P +D K R R
Sbjct: 61 QCLSKLVQIAPRAKRNFILDQCNVYNSGQRRKLLAFKGFCRKVVVVVPTEDDWKKRLELR 120
Query: 391 FKEMGKEVPADAVNNM 406
+ G++VP + M
Sbjct: 121 KEAEGEDVPESVMLEM 136
>gi|355694942|gb|AER99839.1| heteroproteinous nuclear ribonucleoprotein U [Mustela putorius
furo]
Length = 277
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Query: 285 KWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTP 344
K ++P K Y +LGTN I+++M V G ++ + + L+ RA + A+R
Sbjct: 2 KHAAENPGK-YNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKK 60
Query: 345 RNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVN 404
RNFI+DQTNV +A++RK+ LF F++ AVVV PK ED K R+ K+ + GK++P AV
Sbjct: 61 RNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVL 120
Query: 405 NMLANYVLP 413
M N+ LP
Sbjct: 121 KMKGNFTLP 129
>gi|402591162|gb|EJW85092.1| hypothetical protein WUBG_03996, partial [Wuchereria bancrofti]
Length = 577
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 150/336 (44%), Gaps = 63/336 (18%)
Query: 42 QRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQ 100
+R LN D D + I+ +GL L Q W+G R G+ G GK+ +
Sbjct: 85 ERWCLNVHDRDNNLAIDPDGL----LCQSRDPKAWNGTRCTRGVVGKGKFYY-------- 132
Query: 101 PVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVG 160
E T D +CR+G S + V LG +SFG+GGTGK S+ F N+G F +G
Sbjct: 133 ----EGTITDDG-LCRLGWSAAN-AVLDLGTDNKSFGYGGTGKKSYSRQFDNYGTSFTLG 186
Query: 161 DTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHIL 220
DTI C +DL++ TI F+KNGK LG K FD + + +A++P ++
Sbjct: 187 DTIGCMLDLDN---GTIAFSKNGKHLG--KAFD------------IPKTLRNTALYPAVV 229
Query: 221 LKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPA---- 276
LKN + F + EGY + A + N+V+ P N+ + + + PA
Sbjct: 230 LKNAEIRFNFGETEFKYLAEGYIAVCKASSE-NTVISPNGSNVNETKKIAEPNAPACIIL 288
Query: 277 ----------SGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLM 326
G+ +K++K+ + +++G+ + EQ+ + + + C
Sbjct: 289 EPTKELAEQTDGQLKTFKKYLKEPAIRNALVIGSIPVNEQLGII-----MSGIDIITCTP 343
Query: 327 GRANAIFD---VLLSRASRTPRNFIIDQTNVFKSAR 359
GR +LLS R FI+D+ + SA+
Sbjct: 344 GRLEDFIQSGKILLSNV----RFFILDEADSLVSAK 375
>gi|165970540|gb|AAI58419.1| hnrpul2 protein [Xenopus (Silurana) tropicalis]
Length = 471
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 109/246 (44%), Gaps = 30/246 (12%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ CDL ++ + L E F WSG+RA G+ GK F K+ P
Sbjct: 232 VCLDKLTCDLQLKLDKDQFGGRPLFYEKFPSLWSGSRATHGVTKGKVYFEIKVTENLPQK 291
Query: 104 --MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+TP + RVG S +LGE + S+ + G +F +G+ FG D
Sbjct: 292 EGCTETP-----LLRVGWSVAQS-SSQLGEDDLSYAYDSRGLKVTSSHFDPYGDTFGEND 345
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
I C DLE + + F+KNG+ LG A +++ + +FPH+L
Sbjct: 346 VIGCFADLEGDSV-DLFFSKNGENLGEAFH--------------LEKEVADQPLFPHVLC 390
Query: 222 KNVVVVMQFSV--EQGLIPVEGYKSWVSAL--DDGNSVLGPTFCNMKDCEVMMMVGLPAS 277
K V + F E P +G+ A D S+ P ++ EV++M+GLP S
Sbjct: 391 KGCVFQVNFGQKDEAWHPPPDGFIFLKDAQPEDLARSLESP---ETEEYEVLLMIGLPGS 447
Query: 278 GKTTWA 283
GKTTWA
Sbjct: 448 GKTTWA 453
>gi|30017405|ref|NP_835190.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform 2
[Mus musculus]
gi|26334921|dbj|BAC31161.1| unnamed protein product [Mus musculus]
Length = 340
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV- 102
V ++ +CDL F + + L EGFAY WSGARA+ G+ G+ CF KI V
Sbjct: 212 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVK 271
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ T PD HV R+G S D +LGE S+G+GGTGK S F N+G+KF D
Sbjct: 272 HLPSTEPD-PHVVRIGWSL-DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDV 329
Query: 163 IICAIDLE 170
I C LE
Sbjct: 330 IGCFAVLE 337
>gi|303285638|ref|XP_003062109.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456520|gb|EEH53821.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 790
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 28/155 (18%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W+G RA G++ GK+ F C + + RVG S +G LG ++S
Sbjct: 123 WAGGRATAGVSSGKHAFECVV-------------RDDGLVRVGWSGVAGSLGGLGTDKRS 169
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
+GFGGTGK SH G F ++GE +G GD + C +DL+ + TI +AKNGK LG A +
Sbjct: 170 WGFGGTGKKSHAGAFADYGEPYGRGDVVTCFLDLD---VGTISYAKNGKDLGVAFELPPE 226
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
+ A++P + LKN V + F
Sbjct: 227 TT------------TARRALYPAVCLKNAEVGVTF 249
>gi|170576722|ref|XP_001893740.1| ATP-dependent helicase DDX1 [Brugia malayi]
gi|158600075|gb|EDP37423.1| ATP-dependent helicase DDX1, putative [Brugia malayi]
Length = 729
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 68/339 (20%)
Query: 42 QRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQ 100
+R LN D D + I+ +GL L Q W+G R G+ G GKY +
Sbjct: 85 ERWCLNVHDRDNNLAIDPDGL----LCQSRDPKAWNGTRCTRGVVGKGKYYY-------- 132
Query: 101 PVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVG 160
E T D +CR+G S + V LG +SFG+GGTGK S+ F N+G F +
Sbjct: 133 ----EGTVTDDG-LCRLGWSAAN-AVLDLGTDNKSFGYGGTGKKSYNRQFDNYGTSFTLS 186
Query: 161 DTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHIL 220
DTI C +DL++ TI F+KNGK LG K FD + E +A++P ++
Sbjct: 187 DTIGCMLDLDN---GTIAFSKNGKHLG--KAFD------------IPEALRNTALYPAVV 229
Query: 221 LKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPT-FCNMKDCEVMMMVGLPA--- 276
LKN + F + +GY + A + N+V+ P N+ D + + PA
Sbjct: 230 LKNAEIRFNFGETEFKYLSKGYIAVCKASSE-NTVISPNGSSNVNDXKKITEPNAPACII 288
Query: 277 -----------SGKTTWAEKWVKDHPEKRYILLGTNLILEQMKV--PGLLRKHNYSERFQ 323
G+ +K++K+ + +++G+ + EQ+++ G+ +
Sbjct: 289 LEPTKELAEQTDGQLKTFKKYLKEPIIRNALVIGSIPVNEQLRIIMSGI-------DIIT 341
Query: 324 CLMGRANAIFD---VLLSRASRTPRNFIIDQTNVFKSAR 359
C GR +LLS R FI+D+ + SA+
Sbjct: 342 CTPGRLEDFIQSGKILLSNV----RFFILDEADSLVSAK 376
>gi|324506255|gb|ADY42675.1| ATP-dependent RNA helicase DDX1 [Ascaris suum]
Length = 729
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 39 SQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIV 97
S ++ LN D D + I+ +GL L Q W+GAR N G+ G GKY +
Sbjct: 82 SISEKWSLNVYDRDSNLAIDPDGL----LCQSRDPQKWNGARCNRGVFGKGKYYY----- 132
Query: 98 STQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKF 157
E T D +CR+G S D + LG FG+GGTGK S F N+G F
Sbjct: 133 -------EGTVTDDG-LCRLGWSTSD-ALLDLGTDRNGFGYGGTGKKSTNKQFDNYGTSF 183
Query: 158 GVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFP 217
+GDTI C +DL+ T+ F+KNGK LG K FD + + + +FP
Sbjct: 184 TLGDTIGCLLDLDK---GTMAFSKNGKILG--KAFD------------IPQHIANAPLFP 226
Query: 218 HILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDD 251
++LKN + + E EGY SA D
Sbjct: 227 AVVLKNAEIRFNYGAEPFKSLPEGYTGVSSAPAD 260
>gi|308512781|gb|ADO33044.1| ribonucleoprotein [Biston betularia]
Length = 310
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 29 VSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGG 88
V ++ P + ++ L+ D DL+ +E++ L F Y W+G RA G+ G
Sbjct: 65 VVEAKMMEPEIAENKISLSWYDSDLNQYLEEDLSGVVPLSDGAFGYAWAGVRATHGVTAG 124
Query: 89 KYCF----GCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKF 144
+ C+ G I +T+ D E + R G S D + LGE++ S+G+ TG+
Sbjct: 125 RVCYEVRVGSVITTTETTDKEVLA----NGLRFGWSTEDSSL-HLGESQLSWGYESTGRS 179
Query: 145 SHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDS 204
+ G F +G++ D + +DLES P I + NG LGTA +FD
Sbjct: 180 INNGEFKEYGKQLNEKDVVGVYLDLESSP-CKIFYTVNGAELGTAFEFD----------- 227
Query: 205 AVKERQCESAVFPHILLKNVVVVMQF 230
K +FPHIL KN + F
Sbjct: 228 --KSTLEGKTLFPHILTKNQCYRVNF 251
>gi|328875347|gb|EGG23712.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 771
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 17 ESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCW 76
E++ KKA++ P + + +G Q+Q + + D L +GL + A W
Sbjct: 66 ETINKKAEISVPATTTDNNG--EQEQESTTTTKKIEWSTEDRDKDLAINGLLCQSRAKDW 123
Query: 77 SGARANVGIN-GGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
+G R G++ GKY + E T D+ +CRVG S +G + S
Sbjct: 124 AGGRVTYGVSKAGKYYY------------EATVKDE-GLCRVGWSLKKG-TRSIGTDKFS 169
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
+G+GGTGK SH F NFG +G+ D I C +D E+ TI F KNG+ G A Q DA
Sbjct: 170 WGYGGTGKKSHENKFENFGVGYGLNDVIGCLLDTEA---GTITFTKNGEDFGQAYQLDAT 226
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
G +P +LLKN + F
Sbjct: 227 KLG--------------QVFYPAVLLKNAEMGFNF 247
>gi|384251040|gb|EIE24518.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 751
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 84/170 (49%), Gaps = 28/170 (16%)
Query: 30 SDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGK 89
S+ ASGP L+ D D+ F++ +NGL S + + W+G RA VG G+
Sbjct: 78 SNVPASGPVD----CTLSTEDRDVVFNVSENGLSCSAMTKG-----WAGGRATVGATSGR 128
Query: 90 YCFGCKIVSTQPVDMEDTPPDQQHVCRVG-TSRGDDPVGKLGETEQSFGFGGTGKFSHGG 148
F V M++ +CRVG SR ++G ++SFGFG TGK SHGG
Sbjct: 129 LYF--------EVTMQN-----DGLCRVGWASRA--AAFEIGRDKRSFGFGSTGKKSHGG 173
Query: 149 NFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNG 198
F ++G FG G+T+ C +D+ + I + NG +G A + A G
Sbjct: 174 TFTDYGRAFGKGETVGCLLDMTT---GQISYTVNGASMGVAFELPAQMRG 220
>gi|393911234|gb|EJD76225.1| DEAD box ATP-dependent RNA helicase [Loa loa]
Length = 728
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 152/353 (43%), Gaps = 67/353 (18%)
Query: 27 DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGIN 86
D + + + S +R LN D D + I+ +GL L Q W+G R G+
Sbjct: 70 DSMLNKTHKPTNSIDERWCLNVHDRDNNLAIDPSGL----LCQSRDPKAWNGTRCTHGVV 125
Query: 87 G-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFS 145
G GK+ + E T D +CR+G S + V LG + SFG+GGTGK S
Sbjct: 126 GKGKFYY------------EGTITDDG-LCRLGWSTAN-AVLDLGTDKNSFGYGGTGKKS 171
Query: 146 HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSA 205
+ F N+G F +GD I C +DL++ I F+KNGK LG K FD
Sbjct: 172 YNKQFDNYGTSFTLGDIIGCMLDLDN---GIIAFSKNGKHLG--KAFD------------ 214
Query: 206 VKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKD 265
+ + +A++P ++LKN + F + EGY + A + N+V+ P + +
Sbjct: 215 IPDTLRNAALYPAVVLKNAEIRFNFGETEFKHLFEGYIAVCKASPE-NTVISPNGSSANE 273
Query: 266 CEVMMMVGLPA--------------SGKTTWAEKWVKDHPEKRYILLGTNLILEQMKV-- 309
+ + PA G+ +K++K + +++G+ + EQ+ +
Sbjct: 274 SKKIAEPNAPACIILEPTKELAEQTDGQLKTFKKYLKQPTIRNGLVIGSIPVNEQLGIIM 333
Query: 310 PGLLRKHNYSERFQCLMGRANAIFD---VLLSRASRTPRNFIIDQTNVFKSAR 359
G+ + C GR +LLS R FI+D+ + SA+
Sbjct: 334 SGI-------DIITCTPGRLEDFIQSGKILLSNV----RFFILDEADSLVSAK 375
>gi|358332100|dbj|GAA30140.2| ATP-dependent RNA helicase DDX1 [Clonorchis sinensis]
Length = 733
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 92/218 (42%), Gaps = 40/218 (18%)
Query: 41 KQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGI-NGGKYCFGCKIVST 99
KQ LNP D I+ +GL G W GARAN G+ + GKY + +
Sbjct: 79 KQPFKLNPNDRTDALAIDADGLLCQSRDPGG----WHGARANRGVKSSGKYYYEAVVTD- 133
Query: 100 QPVDMEDTPPDQQHVCRVG--TSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKF 157
+ +CRVG T R VG E SFGFGGTGK SH F ++GE F
Sbjct: 134 ------------EGLCRVGWSTLRASYDVGTDAE---SFGFGGTGKMSHCRQFDSYGESF 178
Query: 158 GVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFP 217
G GD I C +DL + TI ++KNGK G A A G +FP
Sbjct: 179 GKGDCIGCFLDLNT---GTISWSKNGKLFGKAYDVPAPLRSAG--------------LFP 221
Query: 218 HILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSV 255
+ LKN + F + P VSA + N +
Sbjct: 222 SVCLKNAEIRFNFGATAFMHPPPAGWLAVSAAEGSNVI 259
>gi|159483183|ref|XP_001699640.1| hypothetical protein CHLREDRAFT_166539 [Chlamydomonas reinhardtii]
gi|158281582|gb|EDP07336.1| predicted protein [Chlamydomonas reinhardtii]
Length = 635
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 42/204 (20%)
Query: 214 AVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVG 273
+ FPH+LLKNV V ++ +A + GP + CEV++M G
Sbjct: 264 SYFPHVLLKNVAVTEATAITAD----------CTATMSPGKLPGP-----EACEVIIMSG 308
Query: 274 LPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIF 333
LP SGKTTWA + +HP KR+ +LG+ L+ + A+ +
Sbjct: 309 LPGSGKTTWAARHAAEHPPKRFYVLGSQLVFALV---------------------ADTV- 346
Query: 334 DVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVN----FRKIAVVVFPKPE-DLKIRSV 388
+V+L RA + RN+IID+T+V +R R L F+ F + V E L +
Sbjct: 347 NVMLMRAPQVARNYIIDRTHVTAESRMRTLAPFLATQPPFGAVCCVALVLNEAQLAAQQK 406
Query: 389 KRFKEMGKEVPADAVNNMLANYVL 412
F+ GK VP + + M + L
Sbjct: 407 AAFEAEGKVVPDEVMAEMRGGHRL 430
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQPV 102
V LNP DC+LD +++N L + L G YCW+G RAN+GI GK+ F + +PV
Sbjct: 21 VCLNPLDCNLDCLLDNNNLSAHSLSHRGCGYCWTGVRANLGIFARGKFFFRVTVGEPRPV 80
Query: 103 DMEDTPP-DQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGK 143
+ +T RVG SR V +LGE S+ + TG
Sbjct: 81 CVNNTAALSTAWGLRVGVSRFQTAVEQLGEVPFSWAYCSTGS 122
>gi|224114077|ref|XP_002316661.1| predicted protein [Populus trichocarpa]
gi|222859726|gb|EEE97273.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 43/61 (70%)
Query: 117 VGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLAT 176
G RGDD VG LGET SFGFGGTGKFS G + EKFGV DTI+C +DLES+ L +
Sbjct: 28 AGIFRGDDAVGNLGETMHSFGFGGTGKFSSAGILSGYCEKFGVEDTIMCCVDLESRHLES 87
Query: 177 I 177
I
Sbjct: 88 I 88
>gi|167539497|ref|XP_001751134.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770284|gb|EDQ84054.1| predicted protein [Monosiga brevicollis MX1]
Length = 295
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 47/223 (21%)
Query: 29 VSDSSASGP------RSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARAN 82
V++S GP R+ +++ ++ D D +F ++ GL L Q A+ W G RA
Sbjct: 96 VAESLQEGPVPAAKQRATSRQLRMSALDRDDNFAVDAAGL----LCQAREAHKWQGGRAT 151
Query: 83 VGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTG 142
G GK+ + + + +CRVG + + + G +QSFGFGGTG
Sbjct: 152 AGALKGKHYYEVTVTD-------------EGLCRVGWATQSATL-ETGIDDQSFGFGGTG 197
Query: 143 KFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVV 202
K S F ++GE FG+ D I C +DL+++ T+ F+KNGK LG A A G
Sbjct: 198 KKSTARQFEDYGEPFGLNDVIGCLLDLDNQ---TMAFSKNGKDLGKAYDLPASIRG---- 250
Query: 203 DSAVKERQCESAVFPHILLKNVVVVMQFS------VEQGLIPV 239
A+FP +KN + FS + QG P+
Sbjct: 251 ----------QALFPACTVKNAELRFCFSGANMKHLPQGYTPM 283
>gi|449019448|dbj|BAM82850.1| DEAD/H box protein [Cyanidioschyzon merolae strain 10D]
Length = 759
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 42/224 (18%)
Query: 30 SDSSASGPRSQKQRVVLNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGI-- 85
+D S SG S R ++ D ++ +GL S+ LHQ WSG RA G+
Sbjct: 75 ADQSRSGASSNPDRWKMSALDRAPHLILDASGLLCASTELHQ------WSGGRAAFGMLP 128
Query: 86 -NGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKF 144
GK+ + +++ +CRVG S + LGE + S+GFGGT K
Sbjct: 129 SARGKWYYEVQVLG-------------DGLCRVGWSAACSTLA-LGEDDLSYGFGGTAKK 174
Query: 145 SHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDS 204
SH G F ++G FG D + A+D E+ I F+KNG+ LG A F LG
Sbjct: 175 SHCGKFESYGGAFGKNDVVGVALDWEN---GEIWFSKNGEPLGRA--FSINRKTLG---- 225
Query: 205 AVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSA 248
+ A++PH+ LKN V + FS + +P G++ SA
Sbjct: 226 -------DRALYPHVYLKNSQVRVIFS-DTSYLPGAGFREVGSA 261
>gi|255072253|ref|XP_002499801.1| predicted protein [Micromonas sp. RCC299]
gi|226515063|gb|ACO61059.1| predicted protein [Micromonas sp. RCC299]
Length = 790
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 32/161 (19%)
Query: 76 WSGARANVGI-NGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W+GARA VG+ +GG++ F +V + R G S + LG
Sbjct: 130 WAGARATVGVAHGGRHHFEITVV-------------DDGLVRCGWSTVAGSLDGLGTDSH 176
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
SFGFGGTGK SHGG F FG+ FG GD + C++DLE + F+ NG+
Sbjct: 177 SFGFGGTGKKSHGGAFETFGKPFGAGDVVGCSVDLER---GVVNFSINGQ---------- 223
Query: 195 GSNGLGVVDSA-----VKERQCESAVFPHILLKNVVVVMQF 230
+GLG D + + A+FP + LKN V+ F
Sbjct: 224 DCSGLGSGDKSGDAFTIPASMRGHALFPAVCLKNAECVVNF 264
>gi|256085130|ref|XP_002578776.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|360045392|emb|CCD82940.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 742
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 86/195 (44%), Gaps = 36/195 (18%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGIN-GGKYCFGCK 95
P+ ++ LN D I+ NGL G W GARAN G+ G+Y +
Sbjct: 85 PKHSSGQMKLNVYDRTDAMAIDANGLLCQSRDPGG----WHGARANRGVKCSGRYYYEAH 140
Query: 96 IVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGE 155
+ + +CRVG S + +G +SFGFGGTGK SH F ++GE
Sbjct: 141 VTD-------------EGLCRVGWSTLN-ASHDVGTDAESFGFGGTGKMSHRRQFDSYGE 186
Query: 156 KFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAV 215
FG GDTI C +DL++ +I ++KNGK G A A G +
Sbjct: 187 AFGKGDTIGCFLDLDN---GSISWSKNGKLFGKAYDIPAHLRSKG--------------L 229
Query: 216 FPHILLKNVVVVMQF 230
FP + LKN + F
Sbjct: 230 FPSVCLKNAELRFNF 244
>gi|193613360|ref|XP_001944084.1| PREDICTED: ATP-dependent RNA helicase Ddx1-like [Acyrthosiphon
pisum]
Length = 725
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 32/156 (20%)
Query: 76 WSGARANVGI-NGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ N GKY F +T + +CRVG S V LG +
Sbjct: 118 WHGCRATKGVKNSGKYYF-------------ETTVTDEGLCRVGWST-PGAVLDLGTDKF 163
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FG+GGTGK S+ F ++G+ FG+ DTI C +DL++ TIGF+KNG +LG A + A
Sbjct: 164 GFGYGGTGKKSNNKQFDSYGQSFGLHDTIGCWLDLDN---WTIGFSKNGTYLGDAFKIPA 220
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
SA +P ++LKN + F
Sbjct: 221 NLK--------------TSAFYPAVVLKNAEIAFNF 242
>gi|327261293|ref|XP_003215465.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Anolis
carolinensis]
Length = 740
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 89/200 (44%), Gaps = 40/200 (20%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + + W G R+ G+ GKY +
Sbjct: 93 MNPYDRGTAFAIGSDGLCCQSREIKE------WHGCRSTRGVTKGKYYY----------- 135
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ Q +CRVG S G + LG + FG+GGTGK SH F ++GE+F + DTI
Sbjct: 136 --EVACRDQGLCRVGWSSGQASL-DLGTDKFGFGYGGTGKKSHNKQFDSYGEEFTMHDTI 192
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C +D++ I F+KNGK LG A + A A+FP +LKN
Sbjct: 193 GCYVDVDK---GQITFSKNGKDLGVAFEIPAHLK--------------NQALFPACVLKN 235
Query: 224 VVVVMQFSVEQ-GLIPVEGY 242
+ F E P EGY
Sbjct: 236 AELKFNFGEEDFKFPPKEGY 255
>gi|312083180|ref|XP_003143753.1| ATP-dependent helicase DDX1 [Loa loa]
Length = 574
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 27 DPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGIN 86
D + + + S +R LN D D + I+ +GL L Q W+G R G+
Sbjct: 70 DSMLNKTHKPTNSIDERWCLNVHDRDNNLAIDPSGL----LCQSRDPKAWNGTRCTHGVV 125
Query: 87 G-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFS 145
G GK+ + E T D +CR+G S + V LG + SFG+GGTGK S
Sbjct: 126 GKGKFYY------------EGTITDDG-LCRLGWSTAN-AVLDLGTDKNSFGYGGTGKKS 171
Query: 146 HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSA 205
+ F N+G F +GD I C +DL++ I F+KNGK LG K FD
Sbjct: 172 YNKQFDNYGTSFTLGDIIGCMLDLDN---GIIAFSKNGKHLG--KAFD------------ 214
Query: 206 VKERQCESAVFPHILLKNVVVVMQF 230
+ + +A++P ++LKN + F
Sbjct: 215 IPDTLRNAALYPAVVLKNAEIRFNF 239
>gi|296486596|tpg|DAA28709.1| TPA: heterogeneous nuclear ribonucleoprotein U-like 1-like [Bos
taurus]
Length = 232
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 19/124 (15%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V ++ +CDL F + +G L EGFA+ WSGARA+ + G+ C
Sbjct: 107 VAIDTYNCDLHFKVARDGSSGYRLMIEGFAHLWSGARASYRVRRGRVC------------ 154
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
PD HV R+G S D +LGE S+G+GG+GK S G F N+G+KF D I
Sbjct: 155 -----PDP-HVVRIGWSL-DSCSTQLGEEPFSYGYGGSGKKSTNGRFENYGDKFAENDVI 207
Query: 164 ICAI 167
C I
Sbjct: 208 GCFI 211
>gi|312382921|gb|EFR28198.1| hypothetical protein AND_04169 [Anopheles darlingi]
Length = 1419
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 39 SQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEG-FAYCWSGARANVGINGGKYCFGCKI- 96
+ KQ L+ D DL+ I L S+ +G F W G RAN G+ GG+ F +
Sbjct: 746 TDKQNATLSWYDSDLNLIISPEDLLSAKPLADGIFGLVWGGVRANFGVTGGRVFFEVLVG 805
Query: 97 VSTQPVDMEDTPPDQQHVC---RVGTS---RGDDPVGKLGETEQSFGFGGTGKFSHGGNF 150
QP P+ + R+G S P +LGE+++S+G+ G+ GG F
Sbjct: 806 DEMQPATRSPFVPEGETCTPEIRIGWSIQPAASTPKRQLGESDRSYGYANDGQKVLGGTF 865
Query: 151 LNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQ 210
+G +G D I +DLES+P I + N G A +FD S ++ A
Sbjct: 866 EKYGGSYGKQDVIGAYLDLESQPC-RIQYTLNRVRQGEAYEFDKDS-----LEGA----- 914
Query: 211 CESAVFPHILLKNVVVVMQF 230
A+FPHI KN+ + F
Sbjct: 915 ---ALFPHIYTKNLAFKVNF 931
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 336 LLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFR-KIAVVVFPKPEDLKIRSVKRFKEM 394
L+ A + RN +IDQTNVF S +KR+L+ F F+ + A+ V P+ E+ K R ++ +
Sbjct: 1084 LIEIACKRRRNILIDQTNVFASEQKRRLKGFGGFKVRRAIAVVPEVEEYKRRYEQKVAKY 1143
Query: 395 GKEVPADAVNNMLANYVLP 413
GKEVP +N M AN +P
Sbjct: 1144 GKEVPDSTLNTMKANIFVP 1162
>gi|452823982|gb|EME30988.1| DEAD box ATP-dependent RNA helicase, putative [Galdieria
sulphuraria]
Length = 729
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W GARA++G N G++ F K++S +CRVG + + + LG +
Sbjct: 113 WQGARASLGANNGRWYFEVKVLS-------------DGLCRVGWATEECSL-DLGTDSEG 158
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
G+GGTGK SH F N+GE +G GD I C ID E L F+KNG L TA + A
Sbjct: 159 LGYGGTGKKSHNREFANYGEPYGEGDIIGCFIDFEESRLF---FSKNGTILQTAFEIPAA 215
>gi|339259008|ref|XP_003369690.1| ATP-dependent RNA helicase Ddx1 [Trichinella spiralis]
gi|316966051|gb|EFV50686.1| ATP-dependent RNA helicase Ddx1 [Trichinella spiralis]
Length = 773
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 79/181 (43%), Gaps = 36/181 (19%)
Query: 76 WSGARANVGING----GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGE 131
W G RA G+ G GKY + +I + +CRVG S D + LG
Sbjct: 118 WHGTRATKGVTGKGLTGKYYYEIQITD-------------EGLCRVGFSTIDAAL-DLGT 163
Query: 132 TEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQ 191
FG+GGTGK SH F N+GE FG+ D I C I+L+ + + F++NGK A
Sbjct: 164 DAYGFGYGGTGKKSHLKQFDNYGEAFGLNDVIGCFINLDDR---EVKFSRNGKIFPVA-- 218
Query: 192 FDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVE-GYKSWVSALD 250
++ + SA FP I+LKN V F E P GY A D
Sbjct: 219 ------------FSIPTKLDNSAFFPAIVLKNAEVKFNFGSEPFKYPPSGGYIGIREASD 266
Query: 251 D 251
D
Sbjct: 267 D 267
>gi|449681835|ref|XP_002155766.2| PREDICTED: ATP-dependent RNA helicase DDX1-like [Hydra
magnipapillata]
Length = 718
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 36/173 (20%)
Query: 58 EDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRV 117
ED L S H+E W G+R+ +G++ G Y + K+ + +CRV
Sbjct: 97 EDGLLCQSREHKE-----WQGSRSTLGVSKGSYYYEVKVTD-------------EGLCRV 138
Query: 118 GTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATI 177
G S ++ ++G +SFGFGGTGK S F +GE +G D I C I+L++ TI
Sbjct: 139 GFST-ENATLEVGCDSESFGFGGTGKKSTNKQFDTYGEPYGKNDIIGCFIELDN---GTI 194
Query: 178 GFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
++KNGK LG A FD G S+ F + LKN ++ F
Sbjct: 195 KYSKNGKDLGHA--FDIPKKLYG------------SSFFASVTLKNAELLFNF 233
>gi|330803477|ref|XP_003289732.1| hypothetical protein DICPUDRAFT_154178 [Dictyostelium purpureum]
gi|325080166|gb|EGC33733.1| hypothetical protein DICPUDRAFT_154178 [Dictyostelium purpureum]
Length = 750
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 33/190 (17%)
Query: 59 DNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG 118
D L GL + + W+G RA GI+ GK+ + I + +CRVG
Sbjct: 99 DRELAVDGLVCQARSAAWNGIRATKGISSGKFYYEAII-------------RDEGLCRVG 145
Query: 119 TSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIG 178
+ +G + S+G+GGTGK SH G F ++G+ FG D I C I+ + + +G
Sbjct: 146 WALSK-ATRNIGTDKFSWGYGGTGKKSHQGTFADYGKPFGNNDCIGCYINFDDE---VMG 201
Query: 179 FAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
+ KNG+ G A F++ + +P ++LKN + F +
Sbjct: 202 YTKNGEDFGEAFTFNSKA----------------GIFYPALVLKNAEIAFNFGKDPMKHQ 245
Query: 239 VEGYKSWVSA 248
++GYK + A
Sbjct: 246 LKGYKPLIEA 255
>gi|387018186|gb|AFJ51211.1| ATP-dependent RNA helicase DDX1 [Crotalus adamanteus]
Length = 740
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 88/197 (44%), Gaps = 39/197 (19%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + + W G R+ GI GKY + V
Sbjct: 93 MNPYDRGNAFAIGADGLCCQSREIKE------WHGCRSTKGITKGKYYY--------EVS 138
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
D Q +CRVG S + LG + FG+GGTGK SH F ++GE+F + DTI
Sbjct: 139 CRD-----QGLCRVGWSSLQASL-DLGTDKFGFGYGGTGKKSHNKQFDSYGEEFTMHDTI 192
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C ID + I F+KNGK LG A + + + A+FP +LKN
Sbjct: 193 GCYIDADK---GQISFSKNGKDLGLAFE--------------IPQNLKNQALFPACVLKN 235
Query: 224 VVVVMQFSVEQGLIPVE 240
+ F E PV+
Sbjct: 236 AELKFNFGEEDFKFPVK 252
>gi|322778877|gb|EFZ09293.1| hypothetical protein SINV_12578 [Solenopsis invicta]
Length = 741
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 72/159 (45%), Gaps = 34/159 (21%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RAN G++G GKY F E T D+ +CRVG S LG +
Sbjct: 111 WHGCRANKGVSGSGKYFF------------EATVTDEG-LCRVGWSTSQ---ANLGTDKF 154
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
+GFGGTGK S+ F N+GE FG+ D I C +DL I F KNG LG A +A
Sbjct: 155 GYGFGGTGKKSNAKQFDNYGEAFGMHDVIGCFLDLAK---GEIKFTKNGVDLGVAFTLNA 211
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE 233
+Q +P ++LKN + F +
Sbjct: 212 --------------QQKSQTYYPAVVLKNAEMAFNFGAQ 236
>gi|341877922|gb|EGT33857.1| hypothetical protein CAEBREN_19095 [Caenorhabditis brenneri]
Length = 733
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 19 VVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLK-SSGLHQEGFAYCWS 77
V ++ K+ S S+ + +S +R LNP D D I+ GL S + +E W
Sbjct: 64 VWERRKLAISPSKSAENSEKSPGKRFELNPEDRDPHLKIDRTGLNCESRIPKE-----WH 118
Query: 78 GARANVGINGG-KYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSF 136
GARA G+ GG KY F I +CRVG + + K+G +SF
Sbjct: 119 GARAMGGVTGGGKYYFEVTIT-------------LDGLCRVGWATMAGSL-KIGTDFESF 164
Query: 137 GFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGS 196
G+GGTGK S+G F ++G F GD + C +DL++ + ++KNG TA D
Sbjct: 165 GYGGTGKKSYGKRFDDYGRSFTTGDVLGCYLDLDNLKM---WWSKNGNEYPTAYTIDKKF 221
Query: 197 NGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
DS +FP +L +N + + F + G P
Sbjct: 222 R-----DSPAH------CLFPAVLCQNSGLAVNFGGDLGSAP 252
>gi|307199449|gb|EFN80062.1| ATP-dependent RNA helicase Ddx1 [Harpegnathos saltator]
Length = 725
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 71/159 (44%), Gaps = 32/159 (20%)
Query: 76 WSGARANVGIN-GGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RAN G++ GKY F C + + +CRVG S + LG +
Sbjct: 112 WHGCRANKGVSRSGKYFFECIVTD-------------EGLCRVGWSTSQASL-DLGTDKF 157
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
+GFGGTGK S+ F N+GE FG+ D I C +DL I F KNG LG A +A
Sbjct: 158 GYGFGGTGKKSNAKQFDNYGEAFGMHDVIGCFLDLVK---GEIKFTKNGVDLGVAFTLNA 214
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE 233
+Q +P ++LKN + F +
Sbjct: 215 --------------QQKSQTYYPAVVLKNAEMSFNFGAQ 239
>gi|237840519|ref|XP_002369557.1| ATP-dependent RNA helicase DDX family protein, putative [Toxoplasma
gondii ME49]
gi|211967221|gb|EEB02417.1| ATP-dependent RNA helicase DDX family protein, putative [Toxoplasma
gondii ME49]
Length = 768
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 41/227 (18%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKI 96
P + L+ A DL + D G + S G W G R + GKY + +I
Sbjct: 81 PNQASRGCTLDEAARDLQICLGD-GERCSCADSRG----WRGVRGTAPVLAGKYMYEVEI 135
Query: 97 VSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKL--GETEQSFGFGGTGKFSHGGNFLNFG 154
+S V RVG +GKL G+ E SFG+GGTGK S G F ++G
Sbjct: 136 LSPGLV-------------RVGWG---TRLGKLEIGKDENSFGYGGTGKKSWNGRFEDYG 179
Query: 155 EKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESA 214
+FG GD + C +D + T+ FA NG+ LG A V+ A++ SA
Sbjct: 180 VQFGAGDVVGCLLDRSNPDRGTVSFAVNGRLLGEAF----------VLPPALR----NSA 225
Query: 215 VFPHILLKNVVVVMQFSVEQGLIPVEGYK--SWVSALDDGNSVLGPT 259
+ P I K+ +F+ + PVEG+ + + A DD + G T
Sbjct: 226 LLPAICGKDFDARCRFARLE--FPVEGFAPVANLKACDDARCLAGET 270
>gi|95007263|emb|CAJ20483.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii RH]
Length = 712
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 41/227 (18%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKI 96
P + L+ A DL + D G + S G W G R + GKY + +I
Sbjct: 81 PNQASRGCTLDEAARDLQICLGD-GERCSCADSRG----WRGVRGTAPVLAGKYMYEVEI 135
Query: 97 VSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKL--GETEQSFGFGGTGKFSHGGNFLNFG 154
+S V RVG +GKL G+ E SFG+GGTGK S G F ++G
Sbjct: 136 LSPGLV-------------RVGWG---TRLGKLEIGKDENSFGYGGTGKKSWNGRFEDYG 179
Query: 155 EKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESA 214
+FG GD + C +D + T+ FA NG+ LG A V+ A++ SA
Sbjct: 180 VQFGAGDVVGCLLDRSNPDRGTVSFAVNGRLLGEAF----------VLPPALR----NSA 225
Query: 215 VFPHILLKNVVVVMQFSVEQGLIPVEGYK--SWVSALDDGNSVLGPT 259
+ P I K+ +F+ + PVEG+ + + A DD + G T
Sbjct: 226 LLPAICGKDFDARCRFARLE--FPVEGFAPVANLKACDDARCLAGET 270
>gi|221482769|gb|EEE21100.1| ATP-dependent helicase / DEAD box protein, putative [Toxoplasma
gondii GT1]
Length = 761
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 41/227 (18%)
Query: 37 PRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKI 96
P + L+ A DL + D G + S G W G R + GKY + +I
Sbjct: 81 PNQASRGCTLDEAARDLQICLGD-GERCSCADSRG----WRGVRGTAPVLAGKYMYEVEI 135
Query: 97 VSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKL--GETEQSFGFGGTGKFSHGGNFLNFG 154
+S V RVG +GKL G+ E SFG+GGTGK S G F ++G
Sbjct: 136 LSPGLV-------------RVGWG---TRLGKLEIGKDENSFGYGGTGKKSWNGRFEDYG 179
Query: 155 EKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESA 214
+FG GD + C +D + T+ FA NG+ LG A V+ A++ SA
Sbjct: 180 VQFGAGDVVGCLLDRSNPDRGTVSFAVNGRLLGEAF----------VLPPALR----NSA 225
Query: 215 VFPHILLKNVVVVMQFSVEQGLIPVEGYK--SWVSALDDGNSVLGPT 259
+ P I K+ +F+ + PVEG+ + + A DD + G T
Sbjct: 226 LLPAICGKDFDARCRFARLE--FPVEGFAPVANLKACDDARCLAGET 270
>gi|346466929|gb|AEO33309.1| hypothetical protein [Amblyomma maculatum]
Length = 634
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 34/164 (20%)
Query: 76 WSGARANVGIN-GGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G R G+ GKY + K+ + +CRVG + LG +Q
Sbjct: 14 WHGCRCTKGVQYRGKYYYEAKVTD-------------EGLCRVGWAT-QAASHDLGTDKQ 59
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
SFG+GGTGK S G F ++GEKFG+ D I C +DL++ ++ F+KNG G A + A
Sbjct: 60 SFGYGGTGKKSFGRQFDDYGEKFGMHDVIGCYLDLDN---GSVKFSKNGNVFGEAFRIPA 116
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
+FP ++LKN MQF+ G P
Sbjct: 117 NLT--------------RCPMFPAVVLKN--AEMQFNFGDGETP 144
>gi|401396341|ref|XP_003879798.1| putative ATP-dependent RNA helicase DDX family protein [Neospora
caninum Liverpool]
gi|325114206|emb|CBZ49763.1| putative ATP-dependent RNA helicase DDX family protein [Neospora
caninum Liverpool]
Length = 762
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G R + GKY + +I+S P V GT G +GK E S
Sbjct: 116 WRGVRGTAPVLSGKYMYEVEILS----------PGLMRV-GWGTRLGKFEIGK---DENS 161
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FG+GGTGK S G F ++G +FG GD + C +D + T+ FA NG+ LG A
Sbjct: 162 FGYGGTGKKSWNGRFEDYGVQFGAGDVVGCLLDRSNPERGTVSFAVNGRLLGEAF----- 216
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYK--SWVSALDDGN 253
V+ A++ SA+ P I K+ F+ + PVEG+ + + A DD
Sbjct: 217 -----VLPPALR----NSALLPAICGKDFDARCHFARLE--FPVEGFAPLAALQACDDAR 265
Query: 254 SVLGPTFC 261
S+ + C
Sbjct: 266 SLADTSAC 273
>gi|145347767|ref|XP_001418333.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578562|gb|ABO96626.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 762
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 50/225 (22%)
Query: 49 ADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGIN-------GGKYCFGCKIVSTQP 101
A C +D+D + + Q W G R G + K CF
Sbjct: 107 ATCAVDYD--------ANVVQSRATQSWGGVRGRFGADPRTGAERALKVCF--------E 150
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
V+ D + + R G S + LG S+G+GGTGK SH +F ++GEKFG GD
Sbjct: 151 VEARD-----EGLARCGYSSRFGALDGLGADAHSYGYGGTGKKSHNKSFEDYGEKFGKGD 205
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
+ C +DLE+ + F KNGK LG A + S +C+ +FP + +
Sbjct: 206 CVGCLLDLEN---GVVTFTKNGKALGEAFRLSEQSA------------KCD-GLFPAVCV 249
Query: 222 KNVVVVMQFSVEQGLIPV-EGYKSWVS-----ALDDGNSVLGPTF 260
KN V++ + P+ EGY ++ S A+D ++ G T
Sbjct: 250 KNAECVVRLVESEFKYPMPEGYVAFGSLRGCDAVDGDDASAGDTL 294
>gi|308805560|ref|XP_003080092.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
gi|116058551|emb|CAL53740.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
Length = 960
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 81/191 (42%), Gaps = 45/191 (23%)
Query: 64 SSGLHQEGFAYCWSGARANVGING-------GKYCFGCKIVSTQPVDMEDTPPDQQHVCR 116
+SG Q W G R GI+ GK F ++ + R
Sbjct: 310 ASGRTQSRSMTSWGGVRGRYGIDPRREGETVGKVMFEAEVT-------------DDGLAR 356
Query: 117 VGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLAT 176
G S + LG S+G+GGTGK SH +F ++GEKF GD + C +D+E
Sbjct: 357 FGFSSRFGALDGLGADAHSYGYGGTGKKSHNKSFEDYGEKFKKGDVVGCLLDIEG---GV 413
Query: 177 IGFAKNGKWLGTAKQF---DAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE 233
+ F KNGK LG A + A S+GL FP + LKN V++F VE
Sbjct: 414 VSFTKNGKSLGDAFRLSEQSAKSDGL----------------FPAVCLKNAECVVRF-VE 456
Query: 234 QGL--IPVEGY 242
+ P EGY
Sbjct: 457 EDFKHAPPEGY 467
>gi|300120164|emb|CBK19718.2| unnamed protein product [Blastocystis hominis]
Length = 1069
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 38/200 (19%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVS 98
+ Q V +N D D I +G + +Q W G RANV ++G GK+ + C+++S
Sbjct: 471 EDQTVCMNYGDSDAGISIGSDGCTVA--NQSNM---WKGCRANVSVSGSGKFYYECEVLS 525
Query: 99 TQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFG 158
+ +CRVG S D + LG ++ +G+GGTG S+ N+ +G F
Sbjct: 526 S------------TGICRVGWSTSGDSLN-LGTSKTGYGYGGTGMKSNSNNYEKYGSTFS 572
Query: 159 VGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPH 218
+GD I C +DL++ TI F KNG LGV S VK +P
Sbjct: 573 LGDVIGCLLDLDA---GTISFYKNG-------------TSLGVAFSNVKP---ALHYYPT 613
Query: 219 ILLKNVVVVMQFSVEQGLIP 238
I +KN VV++F+ + L P
Sbjct: 614 ICIKNCSVVVRFAAQSSLRP 633
>gi|332022361|gb|EGI62673.1| ATP-dependent RNA helicase Ddx1 [Acromyrmex echinatior]
Length = 729
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 72/159 (45%), Gaps = 32/159 (20%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RAN G+ G GKY F E T D+ +CR+G S + LG +
Sbjct: 116 WHGCRANKGVLGSGKYFF------------EATVTDEG-LCRIGWSTSQAAL-DLGTDKF 161
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
+GFGGTGK S+ F N+GE FG+ D I C +DL I F KNG LG A +A
Sbjct: 162 GYGFGGTGKKSNAKQFDNYGEAFGMHDVIGCFLDLMK---GEIKFTKNGMDLGVAFILNA 218
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE 233
+Q +P ++LKN + F +
Sbjct: 219 --------------QQKSQTYYPAVVLKNAEMAFNFGAQ 243
>gi|156088225|ref|XP_001611519.1| DEAD/DEAH box helicase domain containing protein [Babesia bovis]
gi|154798773|gb|EDO07951.1| DEAD/DEAH box helicase domain containing protein [Babesia bovis]
Length = 693
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 66 GLHQEGF------AYCWSGARANVGIN-GGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG 118
GLH G+ A W G R + G++ G+YC+ CK+ S+ + R G
Sbjct: 110 GLHISGYDISPDNASQWLGGRISTGVSLKGRYCYECKVTSSG-------------IVRFG 156
Query: 119 TSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIG 178
S D +G S+GFG TGK S+GG FL++G +G GD ++ ID + + I
Sbjct: 157 WST-DGCKYSVGLDHDSYGFGSTGKKSNGGKFLDYGAPYGNGDVLMSIIDFDR---SEIS 212
Query: 179 FAKNGKWLGTAKQF 192
+ NG+ LGTA +
Sbjct: 213 YKLNGRHLGTAYKL 226
>gi|118360086|ref|XP_001013280.1| SPRY domain containing protein [Tetrahymena thermophila]
gi|89295047|gb|EAR93035.1| SPRY domain containing protein [Tetrahymena thermophila SB210]
Length = 758
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 79 ARANVGINGGKYCFGCKIVST-QPVD------------MEDTPPDQQHVCRVG-TSRGDD 124
A+AN GI G++ F KI+ P + + D+ + +H+ RVG +++
Sbjct: 73 AKANYGIRSGRFMFEIKIIRYLDPEEFKGFNALAKNQIINDSLKESKHLVRVGWSTQYAK 132
Query: 125 PVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGK 184
LG S G+ +G + GN+ +GE FG GD I C IDLE + + F KNG+
Sbjct: 133 TSTALGVDYDSCGYENSGTRYYAGNYKKYGETFGPGDVIRCCIDLEGQN-KSFSFYKNGQ 191
Query: 185 WLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQG-LIPV 239
+ G A + + +Q + A FP + ++N ++ F Q L P+
Sbjct: 192 FQGIAYR--------------ISNKQNDKAYFPSVNIRNAEIMFNFGNNQDELFPI 233
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 38/163 (23%)
Query: 264 KDCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGT--NLILEQ-MKVPGLLRKHNYSE 320
K E + MVGLPASGKTT+A+++VK K LL N I+E+ MK+ L+K
Sbjct: 399 KQYEAIFMVGLPASGKTTFAQQYVKKAFYKNLTLLMEICNHIMEKSMKLIARLQK----- 453
Query: 321 RFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKP 380
R+ +IDQ NV AR +KL++F NF + A V+
Sbjct: 454 ------------------------RSVLIDQCNVLLKARLKKLKIFKNFVRKAFVLVVSD 489
Query: 381 EDLKIRSVKRFK------EMGKEVPADAVNNMLANYVLPVNKD 417
D + R +KR + +M ++ ++ N+ N+V+P ++
Sbjct: 490 SDQRKRMLKRERQILNQCQMYPKLCLESFRNLQENFVMPTKEE 532
>gi|307172370|gb|EFN63841.1| ATP-dependent RNA helicase Ddx1 [Camponotus floridanus]
Length = 713
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 70/159 (44%), Gaps = 43/159 (27%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RAN GI+G GKY F + + +CRVGT K G
Sbjct: 111 WHGCRANKGISGNGKYFFEAIVTD-------------EGLCRVGTD-------KFG---- 146
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
+GFGGTGK S+ F N+GE FG+ D I C +DL I F+KNG LG A +A
Sbjct: 147 -YGFGGTGKKSNAKQFDNYGEAFGMHDVIGCFLDLTR---GEIKFSKNGVDLGVAFTLNA 202
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE 233
+Q +P ++LKN + F +
Sbjct: 203 --------------QQKSQTYYPAVVLKNAEMAFNFGAQ 227
>gi|71990534|ref|NP_504786.2| Protein F20A1.9 [Caenorhabditis elegans]
gi|351058771|emb|CCD66547.1| Protein F20A1.9 [Caenorhabditis elegans]
Length = 433
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 35 SGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFG 93
+ PR K LN D DL +I++ GL ++ W GAR G+ G GKY +
Sbjct: 4 TSPRESK----LNKQDQDLHLEIDETGLACKSEVKKR----WLGARGTAGLYGNGKYYYE 55
Query: 94 CKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNF 153
I S + +CRVG + + +G+ SFG+GGTG S F ++
Sbjct: 56 VTITS-------------KGLCRVGWATLGGSLN-IGKGLDSFGYGGTGMKSTHKKFDDY 101
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCES 213
G F + D I C +DL+S+ TI ++KNG+ A D VK + +
Sbjct: 102 GLPFTLNDVIGCYLDLDSR---TIWWSKNGEQFPAAFSID------------VKYKNSNT 146
Query: 214 AVFPHILLKNVVVVMQFSVEQGLIP 238
+FP +L +N + + F + P
Sbjct: 147 CLFPAVLCQNSSLSVNFGSQPFKFP 171
>gi|14250287|gb|AAH08570.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Mus musculus]
Length = 740
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 91/207 (43%), Gaps = 36/207 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G R G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRGTRGLLKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + F FGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFRFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + A +K + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFEIPA----------HIKNQ----ALFPACVLKNAE 237
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALDD 251
+ F E+ P +G+ + A D+
Sbjct: 238 LKFNFGEEEFKFPPKDGFVALSKAPDN 264
>gi|158297905|ref|XP_318051.4| AGAP004765-PA [Anopheles gambiae str. PEST]
gi|157014552|gb|EAA13221.5| AGAP004765-PA [Anopheles gambiae str. PEST]
Length = 728
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 74/159 (46%), Gaps = 37/159 (23%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G+R G+ G GKY + E T D+ +CRVG S + LG
Sbjct: 115 WHGSRCTTGVRGKGKYYY------------EATVTDEG-LCRVGWSTELASL-DLGTDRF 160
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA---KQ 191
+GFGGTGK S+ F +GE FG D I C +DL+ + +A F+KNG LGTA +
Sbjct: 161 GYGFGGTGKKSNCKQFDAYGEAFGKQDVIGCMLDLDGREIA---FSKNGTSLGTAFKLSE 217
Query: 192 FDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
DA +N + FP ++LKN + F
Sbjct: 218 ADAKNN----------------SYFPAVVLKNAEIAFNF 240
>gi|443723313|gb|ELU11795.1| hypothetical protein CAPTEDRAFT_169026 [Capitella teleta]
Length = 762
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 106/252 (42%), Gaps = 41/252 (16%)
Query: 59 DNGLKSSGLHQEGFAYCWSGARANVGIN--GGKYCFGCKIVSTQPVDMEDTPPDQQHVCR 116
D+GL Q+ W GAR N G++ G +Y F ++ + +CR
Sbjct: 105 DDGLLCQSRDQQ----VWHGARCNKGVSSKGCRYYFEIRVTD-------------EGLCR 147
Query: 117 VGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLAT 176
VG S LG ++ +GFGGTGK S F +GE FG+ D I IDL++ T
Sbjct: 148 VGWSTVKAKF-DLGTDKEGYGFGGTGKKSFSRQFDTYGEPFGLDDVIGNYIDLDT---MT 203
Query: 177 IGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGL 236
I +++NG + K FD + S FP I LKN V F +
Sbjct: 204 IKWSRNG--VDYGKAFD------------ISAHLRNSVFFPAICLKNAEVKFNFGASKFA 249
Query: 237 IPVE-GYKSWVSALDDGNSVLGPTFCNMKDCEVM-MMVGLPASGKTTWAEKWVKDHPEKR 294
P + GYK+ A D V T + C+ M + V L +G T +K K +
Sbjct: 250 YPPQGGYKALAEAPAD--LVTQSTAGGERPCKYMYIYVNLCTTGNTQSVQKAPKPNAPYA 307
Query: 295 YILLGTNLILEQ 306
I+ + + EQ
Sbjct: 308 IIIEPSRELAEQ 319
>gi|340728380|ref|XP_003402503.1| PREDICTED: ATP-dependent RNA helicase Ddx1-like isoform 1 [Bombus
terrestris]
Length = 733
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 32 SSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKY 90
SS SG + +L+ D + +GL+ Q+ W G RAN GI G GKY
Sbjct: 80 SSNSGHQQHSSHWLLSLFDRGRALAVTPDGLRCQSREQKE----WHGCRANKGILGKGKY 135
Query: 91 CFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNF 150
F + + +CRVG S + LG + FG+GGTGK S+ F
Sbjct: 136 FFEAIVTD-------------EGLCRVGWSTSQASL-DLGTDKFGFGYGGTGKKSNAKQF 181
Query: 151 LNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQ 210
N+G+ FG+ D + C ++L I F NG LG A +A +Q
Sbjct: 182 DNYGKAFGMHDVVGCLLNLSK---GEISFTLNGVDLGPAFTLNA--------------QQ 224
Query: 211 CESAVFPHILLKNVVVVMQFSVE 233
+P ++LKN + F +
Sbjct: 225 KSQTFYPAVVLKNAEMSFNFGAQ 247
>gi|440797160|gb|ELR18255.1| ATPdependent RNA helicase Ddx1, putative [Acanthamoeba castellanii
str. Neff]
Length = 753
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 81/198 (40%), Gaps = 47/198 (23%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
+V L+P D D ++ GL + Q + W G RA VG+ GKY + K+
Sbjct: 102 KVALSPDDRDARVAVDARGL----VCQSRDEFQWGGCRATVGVTTGKYYYEAKVTD---- 153
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTG----------KFSHGGNFLN 152
+ +CRVG S + LG +GFGGTG K S+ F
Sbjct: 154 ---------EGLCRVGWSTRAAAL-DLGTDAHGYGFGGTGTHSRFVSNHCKKSNRRQFDT 203
Query: 153 FGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCE 212
+GE +G D I C ID + TI F KNG+ L K FD G
Sbjct: 204 YGEPYGKNDVIGCFIDCDE---GTIHFTKNGRSLD--KAFDIPPRGF------------- 245
Query: 213 SAVFPHILLKNVVVVMQF 230
A +P ++LKN + F
Sbjct: 246 -AFYPAVVLKNAEMEFNF 262
>gi|321469806|gb|EFX80785.1| hypothetical protein DAPPUDRAFT_211767 [Daphnia pulex]
Length = 737
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 32/156 (20%)
Query: 76 WSGARANVGI-NGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
WSG RA G+ + GKY + E T D+ +CRVG S + + LG
Sbjct: 120 WSGIRATQGVVSKGKYFY------------EATVSDEG-LCRVGWSLNEANL-DLGTDRY 165
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
+GFGGTGK S+ F ++G +G+ D I CA+DL+++ I F KNG LG K FD
Sbjct: 166 GYGFGGTGKKSNNRQFDDYGTAYGLNDVIGCALDLDNR---VISFFKNGVDLG--KAFD- 219
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
++ K + A+FP + LKN + F
Sbjct: 220 -------INPEFKNK----ALFPAVALKNAELEFNF 244
>gi|25148291|ref|NP_500004.2| Protein Y55F3BR.1 [Caenorhabditis elegans]
gi|351059697|emb|CCD67291.1| Protein Y55F3BR.1 [Caenorhabditis elegans]
Length = 728
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 35/194 (18%)
Query: 32 SSASGPRSQKQR-VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GK 89
S SG + + R LN D D+ I+ GL + A W GARA G+ G GK
Sbjct: 74 SQNSGQKPENSREFQLNREDRDVSLQIDKTGLNC----ESRVAKEWHGARATAGLYGNGK 129
Query: 90 YCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGN 149
Y + + + +CRVG + + K+G +SFG+GGTGK S G
Sbjct: 130 YYYEVTVT-------------RDGLCRVGWATLSGSL-KIGTDFESFGYGGTGKKSFGKK 175
Query: 150 FLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKER 209
F ++G F D + C +DL+ I ++KNG A Q D K +
Sbjct: 176 FDDYGTSFTTNDVLGCFLDLDE---LKIWWSKNGVQFPVAYQIDK------------KFK 220
Query: 210 QCESAVFPHILLKN 223
+ ++P IL +N
Sbjct: 221 TAATCLYPAILCQN 234
>gi|349802125|gb|AEQ16535.1| putative hnrnpu [Pipa carvalhoi]
Length = 316
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 295 YILLGTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNV 354
Y +LGTN ILE M V G ++ S + L+ RA + A+R R+FI+DQTN+
Sbjct: 143 YNILGTNNILE-MTV-GCKKQMTDSGKMNTLLQRAPQCLSKFIEIAARKKRHFILDQTNI 200
Query: 355 FKSARKRKLRLFVNFRKIAVVVFPKPEDLKIRS 387
+A++RK+ LF F++ AVVV P E+ K R+
Sbjct: 201 STAAQRRKMCLFAGFQRKAVVVCPTDEEYKERT 233
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG---TSRGDDPVGKLGET 132
+ G RA G++ GK CF K+ PV + D H RVG +S G LGE
Sbjct: 51 YFGGRATYGVSKGKVCFEMKVTEKIPVKVYTKETDV-HEVRVGWPFSSCGY----MLGEE 105
Query: 133 EQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDL 169
E S+G+ S G +GEK+ D I C ++L
Sbjct: 106 ENSYGYSLKASKSCNGVAEEYGEKYDENDVITCCVNL 142
>gi|384941284|gb|AFI34247.1| heterogeneous nuclear ribonucleoprotein U-like protein 2 [Macaca
mulatta]
Length = 367
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
V L+ DL F + + L E F WSGAR+ G+ GK CF K+ P+
Sbjct: 246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMK 305
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
T + + RVG S D +LGE E S+GF G G + G F FG+ FG D I
Sbjct: 306 EGCT---EVSLLRVGWSV-DFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVI 361
Query: 164 IC 165
C
Sbjct: 362 GC 363
>gi|48095590|ref|XP_392325.1| PREDICTED: ATP-dependent RNA helicase Ddx1 isoform 1 [Apis
mellifera]
Length = 733
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 68/158 (43%), Gaps = 30/158 (18%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RAN GI G F IV+ + +CRVG S + LG +
Sbjct: 118 WHGCRANKGIQGKDKYFFEAIVT------------DEGLCRVGWSTSQASL-DLGTDKFG 164
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FG+GGTGK S+ F N+G+ FG+ D I C ++L I F NG LG A +A
Sbjct: 165 FGYGGTGKKSNAKQFDNYGKSFGMHDVIGCLLNLSK---GEISFTLNGADLGPAFTLNA- 220
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE 233
+Q +P ++LKN + F +
Sbjct: 221 -------------QQKSQTFYPAVVLKNAEMSFNFGAQ 245
>gi|380021573|ref|XP_003694637.1| PREDICTED: ATP-dependent RNA helicase Ddx1-like [Apis florea]
Length = 718
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 68/158 (43%), Gaps = 30/158 (18%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RAN GI G F IV+ + +CRVG S + LG +
Sbjct: 118 WHGCRANKGIQGKNKYFFEAIVT------------DEGLCRVGWSTSQASL-DLGTDKFG 164
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FG+GGTGK S+ F N+G+ FG+ D I C ++L I F NG LG A +A
Sbjct: 165 FGYGGTGKKSNAKQFDNYGKSFGMHDVIGCLLNLSK---GEISFTLNGADLGPAFTLNA- 220
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE 233
+Q +P ++LKN + F +
Sbjct: 221 -------------QQKSQTFYPAVVLKNAEMSFNFGAQ 245
>gi|391346297|ref|XP_003747414.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Metaseiulus
occidentalis]
Length = 727
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 71/156 (45%), Gaps = 32/156 (20%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G++G GKY F K+ + +CRVG S + LG +
Sbjct: 115 WHGCRATKGVSGKGKYYFESKVTD-------------EGLCRVGWSTQTANL-DLGTDKY 160
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
+GFGGTGK S +F +GE FG+ D I C +DL+ TI ++KNG LG A
Sbjct: 161 GYGFGGTGKKSFNKSFDAYGEPFGIHDVIGCYLDLDE---FTIKWSKNGVDLGKA----- 212
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
+ +E FP ++LKN + F
Sbjct: 213 ----FSIATHLQRE-----IFFPAVVLKNAEMSFNF 239
>gi|66826161|ref|XP_646435.1| hypothetical protein DDB_G0269966 [Dictyostelium discoideum AX4]
gi|74997410|sp|Q55CP6.1|DDX1_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx1; AltName:
Full=DEAD box protein 1
gi|60474396|gb|EAL72333.1| hypothetical protein DDB_G0269966 [Dictyostelium discoideum AX4]
Length = 765
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 33/192 (17%)
Query: 52 DLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQ 111
+LD D + GL + + W G +A GI+ GK+ + ++
Sbjct: 102 ELDQIDRDKNMAVDGLICQSRSSDWCGIKATKGISSGKFYY-------------ESIVRD 148
Query: 112 QHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLES 171
+ +CR+G + +G + S+G+GGTGK SH F+++G+ FG D I C I+ +
Sbjct: 149 EGLCRIGFALKKSS-RNIGTDKFSWGYGGTGKKSHESKFIDYGKPFGNNDVIGCYINFDE 207
Query: 172 KPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFS 231
+ IGF KNG+ G A F++ + +P ++LKN + F
Sbjct: 208 E---IIGFTKNGQDFGEAFTFNSKA----------------GIFYPALVLKNAEMEFNFG 248
Query: 232 VEQGLIPVEGYK 243
+ ++GYK
Sbjct: 249 SKPMKHDLKGYK 260
>gi|298715096|emb|CBJ27784.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 518
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 37/158 (23%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG--TSRGDDPVGKLGETE 133
W+GAR VG+ GG +CF K+ D ++CR G T R LG
Sbjct: 123 WAGARGEVGVLGGVHCFEVKV-------------DFGNLCRFGWATQRASF---NLGTDA 166
Query: 134 QSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFD 193
+GFGGT S+ G+F +GE F GD + C +DL I F+KNG+ LG A +
Sbjct: 167 FGYGFGGTAMKSN-GSFEKYGETFTTGDRVGCRLDLVK---GEISFSKNGRDLGVAFKLP 222
Query: 194 AGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFS 231
G+ G FP + LK+ F+
Sbjct: 223 PGAKG---------------PFFPAVALKSAQASFDFT 245
>gi|156550743|ref|XP_001606114.1| PREDICTED: ATP-dependent RNA helicase Ddx1-like [Nasonia
vitripennis]
Length = 730
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 73/172 (42%), Gaps = 39/172 (22%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA GI G GKY + + + +CRVG S + LG +
Sbjct: 117 WHGCRATKGIQGNGKYYYEAIVTD-------------EGLCRVGWSTQQASL-DLGTDKF 162
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
+G+GGTGK S+ F N+GE FG+ D I C +DL I F KNG LG A
Sbjct: 163 GWGYGGTGKKSNSKQFDNYGEAFGMNDVIGCLLDLGK---GEIKFWKNGADLGPA----- 214
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE-------QGLIPV 239
+ ++Q FP ++LKN + F + QG I V
Sbjct: 215 ---------FFLNQQQKSQTFFPAVVLKNAEMSFNFGAQPFKYPPPQGYIAV 257
>gi|340728382|ref|XP_003402504.1| PREDICTED: ATP-dependent RNA helicase Ddx1-like isoform 2 [Bombus
terrestris]
Length = 724
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 69/159 (43%), Gaps = 32/159 (20%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RAN GI G GKY F + + +CRVG S + LG +
Sbjct: 111 WHGCRANKGILGKGKYFFEAIVTD-------------EGLCRVGWSTSQASL-DLGTDKF 156
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FG+GGTGK S+ F N+G+ FG+ D + C ++L I F NG LG A +A
Sbjct: 157 GFGYGGTGKKSNAKQFDNYGKAFGMHDVVGCLLNLSK---GEISFTLNGVDLGPAFTLNA 213
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE 233
+Q +P ++LKN + F +
Sbjct: 214 --------------QQKSQTFYPAVVLKNAEMSFNFGAQ 238
>gi|350403295|ref|XP_003486759.1| PREDICTED: ATP-dependent RNA helicase Ddx1-like [Bombus impatiens]
Length = 733
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 83/202 (41%), Gaps = 34/202 (16%)
Query: 32 SSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYC 91
SS +G + L+ D + +GL+ Q+ W G RAN GI G
Sbjct: 80 SSNNGHQQHSSHWSLSLFDRGKALAVTPDGLRCQSREQKE----WHGCRANKGILGKDKY 135
Query: 92 FGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFL 151
F IV+ + +CRVG S + LG + FG+GGTGK S+ F
Sbjct: 136 FFEAIVT------------DEGLCRVGWSTSQASL-DLGTDKFGFGYGGTGKKSNAKQFD 182
Query: 152 NFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQC 211
N+G+ FG+ D + C ++L I F NG LG A +A +Q
Sbjct: 183 NYGKAFGMHDVVGCLLNLSK---GEISFTLNGVGLGPAFTLNA--------------QQK 225
Query: 212 ESAVFPHILLKNVVVVMQFSVE 233
+P ++LKN + F +
Sbjct: 226 SQTFYPAVVLKNAEMSFNFGAQ 247
>gi|412993023|emb|CCO16556.1| ATP-dependent RNA helicase DDX1 [Bathycoccus prasinos]
Length = 807
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 20/189 (10%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFA-YCWSGARANVGI-NGGKYCFGCKIVSTQPVD 103
L+ D + F I++ S+GL E A + W+GAR G G V
Sbjct: 117 LSSTDRNALFAIDEE--TSNGLKAECRAKHAWAGARCTTGYCTSGNNNNDDNKKKHAKVG 174
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
E + D V R+G S + + LG S+G+GGTGK SHG F ++G KFG GD +
Sbjct: 175 YECSVLDDGLV-RLGFSFVNASLDGLGTDASSWGYGGTGKKSHGKKFEDYGTKFGKGDVV 233
Query: 164 ICAIDLESKPLATIGFAKNGKWL--GTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
C ++LE+ I +A NG +A F N + + FP I +
Sbjct: 234 TCMLNLET---MEISYALNGTEFPKQSAVAFKLKRNS----------KDGQDVYFPAICV 280
Query: 222 KNVVVVMQF 230
K+ V M F
Sbjct: 281 KDAEVEMNF 289
>gi|321455752|gb|EFX66877.1| hypothetical protein DAPPUDRAFT_262452 [Daphnia pulex]
Length = 412
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 41/232 (17%)
Query: 51 CDLDFDIEDNG---LKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD-MED 106
C +D ++ N + + L + GFAY W+GARAN GI GK C+ K+ V +E+
Sbjct: 182 CLIDLNLTINKTDFVSGAPLTEAGFAYMWAGARANYGIVNGKVCYEVKVTENLAVSHLEE 241
Query: 107 TPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICA 166
+ P+ HV VG S D +LG+ ++ + F + D +
Sbjct: 242 SEPN-HHVVHVGWSI-DSTTYQLGKIKK----------------ILLRVPFQLNDVVGVY 283
Query: 167 IDL-ESKPLATIGFAKNGKWLGTAKQFDAGS-NGLGVVDSAVKERQCESAVFPHILLKNV 224
+D E K + F+ NG+ G A NG A+FPHIL KN
Sbjct: 284 LDASEEKESVELSFSVNGETQGVAFTLPGEELNG--------------RALFPHILTKNC 329
Query: 225 VVVMQF--SVEQGLIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGL 274
+ F E +P EGY+ W S + + G + V+ V L
Sbjct: 330 RFEVNFGQKEEPWFLPTEGYE-WPSKIQQKTNETGTEMTEQELEAVIENVNL 380
>gi|308473574|ref|XP_003099011.1| hypothetical protein CRE_26736 [Caenorhabditis remanei]
gi|308267814|gb|EFP11767.1| hypothetical protein CRE_26736 [Caenorhabditis remanei]
Length = 729
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 45 VLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGG-KYCFGCKIVSTQPV 102
+LN D D I+ +GL + +E W GAR GI+GG Y + I
Sbjct: 87 LLNREDRDASLQIDKSGLNCDARVGKE-----WHGARGKAGIHGGGAYYYEVTIT----- 136
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
+ +CRVG + + K+G +SFG+GGTGK S+G F ++G+ F D
Sbjct: 137 --------RDGLCRVGWATMAGSL-KIGTDFESFGYGGTGKKSYGKKFDDYGKSFTTNDV 187
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK 222
+ C +DL++ I ++KNG+ A D K + + +FP +L +
Sbjct: 188 LGCFLDLDN---LKIWWSKNGEQFPMAYSIDR------------KFKSPATCLFPAVLCQ 232
Query: 223 NVVVVMQF 230
N + + F
Sbjct: 233 NSGLAVNF 240
>gi|159467357|ref|XP_001691858.1| hypothetical protein CHLREDRAFT_136100 [Chlamydomonas reinhardtii]
gi|158278585|gb|EDP04348.1| predicted protein [Chlamydomonas reinhardtii]
Length = 772
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 45 VLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGI---NGGKYCFGCKIVSTQP 101
VL+ D +L + +GL + ++ W G R +VG+ GGK + +
Sbjct: 101 VLSSEDRELHVAVSPDGLSAQSRSEKA----WGGVRGSVGVFASCGGKVYYEVTVT---- 152
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+ +CRVG S + +LG +GFGGTGK SH F ++GE F + D
Sbjct: 153 ---------DEGLCRVGWSCPTAAL-ELGTDRLGWGFGGTGKKSHNRQFDSYGEPFALND 202
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL 221
+ C +D + ++ F KNG+ LG A + + + P I L
Sbjct: 203 VVGCLLDC-GEAGGSVAFTKNGRPLGEAFKL--------------PDNLRNQVLHPAITL 247
Query: 222 KNVVVVMQF-SVEQGLIPVEGY 242
KN V + F + P GY
Sbjct: 248 KNAEVALNFGATPLAFPPPPGY 269
>gi|340375163|ref|XP_003386106.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Amphimedon
queenslandica]
Length = 724
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVST 99
Q V LNP D I +GL L Q W G R N+G+N GKY +
Sbjct: 83 QSATVGLNPHDRGESLAISPDGL----LCQCREHKQWHGCRTNLGVNEGKYYY------- 131
Query: 100 QPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGV 159
E T D+ +CRVG S + +LG+ + FGFGGTGK S F ++GE FG
Sbjct: 132 -----EATVTDEG-LCRVGWSTQLASL-ELGKDKFGFGFGGTGKKSWSNQFDSYGESFGK 184
Query: 160 GDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHI 219
GDTI C IDLE+ +I F+KNG G A G +G FP +
Sbjct: 185 GDTIGCYIDLEN---GSISFSKNGSLFGKAFDIPQGLSG--------------ETFFPAV 227
Query: 220 LLKNVVVVMQF 230
+LKN + F
Sbjct: 228 VLKNAEMRFNF 238
>gi|307111474|gb|EFN59708.1| hypothetical protein CHLNCDRAFT_33556 [Chlorella variabilis]
Length = 755
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 82/189 (43%), Gaps = 35/189 (18%)
Query: 45 VLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDM 104
VLN D D F I +GL+ ++ W G R VG GGK + +
Sbjct: 100 VLNSEDRDPVFAISPDGLRCQARSEQA----WGGCRGTVGAFGGKVYYEATVAD------ 149
Query: 105 EDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTII 164
+ +CRVG S + LG + FGFGGTGK SH F +GE +G+ DTI
Sbjct: 150 -------EGLCRVGWSTQAASL-DLGTDKHGFGFGGTGKKSHNRQFDAYGEPYGLHDTIG 201
Query: 165 CAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNV 224
C +D + L+ F KNG LG A Q G A++P I LKNV
Sbjct: 202 CLLDCQGGGLS---FTKNGVPLGPAFQLPQYMQG--------------QALYPAICLKNV 244
Query: 225 VVVMQFSVE 233
+ + F +
Sbjct: 245 ELAVNFGAQ 253
>gi|323449392|gb|EGB05280.1| hypothetical protein AURANDRAFT_733 [Aureococcus anophagefferens]
Length = 670
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 21/144 (14%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
L+ D D I D+G + W+GARAN G G + V +E
Sbjct: 88 LSREDRDQTMAISDDGATCQSRSER-----WAGARANCGARGNGVVY-------YEVAVE 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
D + + RVG S LG + G+GGT K SH +F +GE +G GD + C
Sbjct: 136 D-----EGLVRVGWSTVAASY-DLGTDAKGVGYGGTAKKSHARSFEAYGETYGKGDVVGC 189
Query: 166 AIDLESKPLATIGFAKNGKWLGTA 189
+DL+S + G+ KNG LG A
Sbjct: 190 WLDLDS---GSCGYTKNGADLGAA 210
>gi|428180708|gb|EKX49574.1| hypothetical protein GUITHDRAFT_162044 [Guillardia theta CCMP2712]
Length = 772
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RAN+ + GKY + ++ S + RVG S LG+
Sbjct: 109 WCGGRANIAVKKGKYMYEVEVQSPG-------------LARVGFSTMAANR-DLGKCANG 154
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FG+GGTGK + F +FG FG GD + C ID+ +A F KNG+ LG A
Sbjct: 155 FGYGGTGKRVNNNKFEDFGLPFGDGDVVGCCIDMAGGDVA---FFKNGEDLGVAFSLPPH 211
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPVEGYKSWVSA 248
G A++P + LK+ V + PV G + A
Sbjct: 212 LRG--------------KALYPTVCLKDCQVRLNLGSAAFRFPVGGLQGICQA 250
>gi|195020190|ref|XP_001985142.1| GH14672 [Drosophila grimshawi]
gi|193898624|gb|EDV97490.1| GH14672 [Drosophila grimshawi]
Length = 730
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G K+ + E T D+ +CRVG S + LG
Sbjct: 120 WHGCRATTGVYGKAKFYY------------EATVTDEG-LCRVGWSTQMANL-DLGTCRY 165
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FG+GGTGK S+ F ++G+ FG D + C +DL+ I F KNG LG A +
Sbjct: 166 GFGYGGTGKKSNNRQFDDYGDAFGKADVVGCMLDLQR---LEISFTKNGTSLGVAFK--- 219
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVEGYKSWVSALDDG- 252
+ E +P ++LKN ++ F + P GY + A D
Sbjct: 220 -----------IPENLRNDNFYPAVVLKNAEMLFNFGKTDFKYAPGNGYVALCQAGPDHS 268
Query: 253 --NSVLGPT 259
N + PT
Sbjct: 269 APNPLANPT 277
>gi|58331968|ref|NP_001011133.1| ATP-dependent RNA helicase DDX1 [Xenopus (Silurana) tropicalis]
gi|82233465|sp|Q5XH91.1|DDX1_XENTR RecName: Full=ATP-dependent RNA helicase DDX1; AltName: Full=DEAD
box protein 1
gi|54261487|gb|AAH84181.1| hypothetical LOC496549 [Xenopus (Silurana) tropicalis]
gi|89273917|emb|CAJ81838.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Xenopus (Silurana)
tropicalis]
Length = 740
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 94/212 (44%), Gaps = 39/212 (18%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + + W G R+ G+N GKY +
Sbjct: 93 MNPYDRGSSFAIGSDGLCCQSREIKE------WHGCRSTRGVNKGKYYY----------- 135
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI
Sbjct: 136 --EVSCHDQGLCRVGWSTLQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTI 192
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C ID+++ T+ ++KNGK LG A Q A AVF +LKN
Sbjct: 193 GCYIDIDN---GTVKYSKNGKDLGLAFQIPAHLKN--------------QAVFASCVLKN 235
Query: 224 VVVVMQFSVEQGLIPVEGYKSWVSALDDGNSV 255
+ F E P + +S DG+ V
Sbjct: 236 AELKFNFGEEDFKFPPKDGFVALSKAPDGHVV 267
>gi|320167114|gb|EFW44013.1| DEAD box polypeptide 1 [Capsaspora owczarzaki ATCC 30864]
Length = 724
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
+V ++ +D D F I ++GL + W+GARA GI GKY +
Sbjct: 84 QVTMSLSDRDATFAIAEDGLLCQSRSAD-----WAGARATQGIAKGKYYY---------- 128
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
E T D+ +CR+G S LG +Q FGFGGTGK + GG F N+G FGV DT
Sbjct: 129 --EATVTDEG-LCRLGWST-ITASRNLGTDKQGFGFGGTGKKAFGGQFENYGLAFGVNDT 184
Query: 163 IICAIDLESKPLATIGFAKNG 183
I C ID+++ I F+KNG
Sbjct: 185 IGCFIDMDAH---QIFFSKNG 202
>gi|268553747|ref|XP_002634860.1| Hypothetical protein CBG13978 [Caenorhabditis briggsae]
Length = 727
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 34/192 (17%)
Query: 40 QKQRVVLNPADCDLDFDIEDNGLKSSG-LHQEGFAYCWSGARANVGINGGKYCFGCKIVS 98
Q + LN D D I+ GL L +E W GARANV +
Sbjct: 81 QSTVIQLNSEDRDRSLQIDKTGLNCECRLGKE-----WHGARANV------------GLY 123
Query: 99 TQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFG 158
+ + +CR+G + + K+G +SFG+GGTGK S G F ++G F
Sbjct: 124 GGGKYYYEVTITRDGLCRIGWATLAGSL-KIGTDFESFGYGGTGKKSFGKKFDDYGTSFT 182
Query: 159 VGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPH 218
D + C +DL++ I ++KNG+ TA D K + + +FP
Sbjct: 183 TNDVLGCFLDLDN---LKIWWSKNGQHFPTAYHIDK------------KFQSPATCLFPA 227
Query: 219 ILLKNVVVVMQF 230
+L +N + + F
Sbjct: 228 VLCQNSGLAVNF 239
>gi|156341122|ref|XP_001620659.1| hypothetical protein NEMVEDRAFT_v1g222858 [Nematostella vectensis]
gi|156205853|gb|EDO28559.1| predicted protein [Nematostella vectensis]
Length = 128
Score = 55.5 bits (132), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 44 VVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
VVL+ + DL I L + L EGF + G RA G GK CF CK+ T VD
Sbjct: 44 VVLDKYNSDLFLKIAPEALSLTILKDEGFPFMAGGVRATYGATSGKICFECKLTETAEVD 103
Query: 104 MEDTPPDQQHVCRVGTSR 121
+ DT + +H RVG R
Sbjct: 104 LPDT-EEPKHFVRVGVYR 120
>gi|389568463|gb|AFK84955.1| ryanodine receptor, partial [Cnaphalocrocis medinalis]
Length = 3952
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 22/185 (11%)
Query: 9 ELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGL--KSSG 66
E PD + +V KVDD + ++ + +++ + D + L ++S
Sbjct: 1014 EDPDMHRSPHLVPYPKVDDAIKKANRDTASETVRTLLVYGYNLDPPTGEQHEALLAEASK 1073
Query: 67 LHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DP 125
L Q F A N ++ GK+ F +I++ P+ RVG + D P
Sbjct: 1074 LKQADFRT--YRAEKNYAVSSGKWYFEFEILTAGPM-------------RVGWAHADMAP 1118
Query: 126 VGKLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGK 184
LG+ E S+ F G F HGG+ +FG++F VGD + C +D+ TI F+ NG+
Sbjct: 1119 GMMLGQDENSWAFDGYNCFKVHGGSTDSFGQQFKVGDIVGCFLDVCD---MTISFSLNGE 1175
Query: 185 WLGTA 189
L A
Sbjct: 1176 LLMDA 1180
>gi|194220950|ref|XP_001502097.2| PREDICTED: ATP-dependent RNA helicase DDX1-like [Equus caballus]
Length = 734
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 91/206 (44%), Gaps = 36/206 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 87 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 129
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 130 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 188
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ I F+KNGK LG A + + + A+FP +LKN
Sbjct: 189 YLDIDK---GHIKFSKNGKDLGLAFE--------------IPQHMKNQALFPACVLKNAE 231
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALD 250
+ F E+ P +G+ + ALD
Sbjct: 232 LKFNFGEEEFKFPPKDGFVALSKALD 257
>gi|335775104|gb|AEH58460.1| ATP-dependent RNA helicase DDX1-like protein [Equus caballus]
Length = 697
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 91/206 (44%), Gaps = 36/206 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 50 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 92
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 93 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 151
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ I F+KNGK LG A + + + A+FP +LKN
Sbjct: 152 YLDIDK---GHIKFSKNGKDLGLAFE--------------IPQHMKNQALFPACVLKNAE 194
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALD 250
+ F E+ P +G+ + ALD
Sbjct: 195 LKFNFGEEEFKFPPKDGFVALSKALD 220
>gi|390363274|ref|XP_790305.3| PREDICTED: ATP-dependent RNA helicase DDX1-like, partial
[Strongylocentrotus purpuratus]
Length = 402
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 97/218 (44%), Gaps = 45/218 (20%)
Query: 24 KVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANV 83
K + +S+AS R+ +N D I+ G+ Q+ W G RAN
Sbjct: 71 KAEGKTQESTAS-VRTDSSSWKMNVYDRGDAMAIDKEGVVCQSREQQ----SWHGTRANK 125
Query: 84 GING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG--TSRGDDPVGKLGETEQSFGFGG 140
G++G G Y + ++ + +CRVG T R D LG +Q FGFGG
Sbjct: 126 GVSGKGMYYYEAEVTD-------------EGLCRVGWATDRADL---NLGTDKQGFGFGG 169
Query: 141 TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLG 200
TGK S G F +GE FG+GD+I C +DL+ I F+KNGK LG A
Sbjct: 170 TGKKSFGRQFDTYGEPFGMGDSIGCYLDLDG---GEIYFSKNGKDLGLA----------- 215
Query: 201 VVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
++ + A +P ++LKN + F GL P
Sbjct: 216 ---FSIPGHLLKLAYYPTVVLKNAEMKFNF----GLTP 246
>gi|198424761|ref|XP_002127771.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
[Ciona intestinalis]
Length = 741
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 65/146 (44%), Gaps = 25/146 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFG--CKIVSTQPVD 103
+NP D F I +GL L Q W G R+ G+ GKY + CK
Sbjct: 92 MNPYDRGNAFAISSDGL----LCQSREVREWHGCRSTRGVTKGKYYYEVLCK-------- 139
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ + RVG S + LG + +GFGGTGK S+ F +GE F + D I
Sbjct: 140 -------DEGLNRVGWSTLSADL-NLGTDKDGYGFGGTGKKSNSRQFNTYGEPFTMHDII 191
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTA 189
C +D++ I ++KNG LG A
Sbjct: 192 GCFLDMDE---GRIKYSKNGIDLGHA 214
>gi|134045133|ref|YP_001096619.1| seryl-tRNA(Sec) kinase [Methanococcus maripaludis C5]
gi|132662758|gb|ABO34404.1| seryl-tRNA(Sec) kinase [Methanococcus maripaludis C5]
Length = 255
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 23/162 (14%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRY--ILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++ GLP+ GK+T+++ K EK I+LGT+LI E V + E ++
Sbjct: 2 LIILTGLPSVGKSTFSKAISKKMAEKNIDNIILGTDLIRESFPV--------WKESYEEF 53
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK-PEDLK 384
+ +N + L+ A + I+D TN + S R+ + + F V ++ K P DL
Sbjct: 54 IRDSN---NYLIKEALGNNFSVIVDDTNYYNSKRRDLMNIANEFDSNYVTIYLKAPLDL- 109
Query: 385 IRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFD 426
+KR E G+++P + + NM + DTPG+ +D
Sbjct: 110 --LLKRNIERGQKIPNEVIKNMYEKF------DTPGTKYAWD 143
>gi|344280166|ref|XP_003411856.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Loxodonta
africana]
Length = 940
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 95/206 (46%), Gaps = 36/206 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ + V
Sbjct: 293 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY--------EVSCH 340
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
D Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 341 D-----QGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 394
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ I F+KNGK LG A + + S +K + A+FP +LKN
Sbjct: 395 YLDIDK---GHIKFSKNGKDLGLAFE----------IPSHIKNQ----ALFPACVLKNAE 437
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALD 250
+ F E+ P +G+ + AL+
Sbjct: 438 LKFNFGEEEFKFPPKDGFVALSKALE 463
>gi|395828586|ref|XP_003787451.1| PREDICTED: ATP-dependent RNA helicase DDX1 isoform 2 [Otolemur
garnettii]
Length = 659
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GKY +
Sbjct: 12 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKYYY------------- 54
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 55 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 113
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + A A+FP +LKN
Sbjct: 114 YLDIDK---GHVKFSKNGKDLGLAFEIPAHMKN--------------QALFPACVLKNAE 156
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 157 LKFNFGEEEFKFP 169
>gi|431911846|gb|ELK13990.1| ATP-dependent RNA helicase DDX1 [Pteropus alecto]
Length = 890
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 88/193 (45%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ + V
Sbjct: 243 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY--------EVSCH 290
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
D Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 291 D-----QGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 344
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ I F+KNGK LG A + + S +K + A+FP +LKN
Sbjct: 345 YLDIDK---GHIKFSKNGKDLGLAFE----------IPSHIKNQ----ALFPACVLKNAE 387
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 388 LKFNFGEEEFKFP 400
>gi|189239355|ref|XP_974286.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
gi|270009695|gb|EFA06143.1| hypothetical protein TcasGA2_TC008987 [Tribolium castaneum]
Length = 731
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 77/173 (44%), Gaps = 39/173 (22%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G R G+ G GKY F E T D+ +CRVG S + LG
Sbjct: 115 WHGGRCTRGVQGSGKYAF------------EATVTDEG-LCRVGWSTLQAKL-DLGTCRN 160
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL++ I F KNG LG A
Sbjct: 161 GFGFGGTGKKSNNKQFDDYGEPFGKNDVITCLLDLDN---GQIKFCKNGTDLGNA----- 212
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE-------QGLIPVE 240
+ ++ +A FP ++LKN + F E QG +P++
Sbjct: 213 ---------FTINKQMLNNAFFPAVVLKNAEMAFNFGEEAFKYPLPQGYVPIK 256
>gi|159905567|ref|YP_001549229.1| chromatin associated protein KTI12 [Methanococcus maripaludis C6]
gi|159887060|gb|ABX01997.1| Chromatin associated protein KTI12 [Methanococcus maripaludis C6]
Length = 264
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 23/162 (14%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRY--ILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++ GLP+ GK+T+++ K EK I+LGT+LI E V ++E ++
Sbjct: 11 LIILTGLPSVGKSTFSKAISKKMAEKNIDNIILGTDLIRESFPV--------WNESYEEF 62
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK-PEDLK 384
+ +N + L+ A R + I+D TN + S R+ + + V ++ K P DL
Sbjct: 63 IRDSN---NYLIKEALRNKFSVIVDDTNYYNSKRRDLINIAKECNTNYVKIYLKAPLDL- 118
Query: 385 IRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFD 426
+KR E G+++P + + NM + DTPG+ +D
Sbjct: 119 --LLKRNIERGQKIPNEVIKNMYEKF------DTPGTKYAWD 152
>gi|395828584|ref|XP_003787450.1| PREDICTED: ATP-dependent RNA helicase DDX1 isoform 1 [Otolemur
garnettii]
Length = 740
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GKY +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKYYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + A A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFEIPAHMKN--------------QALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|147902473|ref|NP_001091352.1| ATP-dependent RNA helicase DDX1 [Xenopus laevis]
gi|162416045|sp|A2VD92.1|DDX1_XENLA RecName: Full=ATP-dependent RNA helicase DDX1; AltName: Full=DEAD
box protein 1
gi|125858590|gb|AAI29618.1| LOC100037192 protein [Xenopus laevis]
Length = 740
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 97/212 (45%), Gaps = 39/212 (18%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + + W G R+ G+N GKY +
Sbjct: 93 MNPYDRGSAFAIGSDGLCCQSREIKE------WHGCRSTRGVNKGKYYY----------- 135
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI
Sbjct: 136 --EVSCHDQGLCRVGWSTLSASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTI 192
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C +D+++ + + F+KNGK LG A Q + S +K + A F +LKN
Sbjct: 193 GCYLDIDN---SIVKFSKNGKDLGLAFQ----------IPSHMKNQ----AFFTSCVLKN 235
Query: 224 VVVVMQFSVEQGLIPVEGYKSWVSALDDGNSV 255
+ F E P + +S DG+ V
Sbjct: 236 AELKFNFGEEDFKFPPKDGFVALSKAPDGHVV 267
>gi|193785506|dbj|BAG50872.1| unnamed protein product [Homo sapiens]
Length = 339
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 363 LRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+R F F++ A+V+ P EDLK R++KR E GK+VP AV M AN+ LP
Sbjct: 1 MRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLP 51
>gi|340624801|ref|YP_004743254.1| chromatin associated protein KTI12 [Methanococcus maripaludis X1]
gi|339905069|gb|AEK20511.1| chromatin associated protein KTI12 [Methanococcus maripaludis X1]
Length = 264
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 29/165 (17%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRY--ILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++ GLP+ GK+T+++ K EK I+LGT+LI E V + E ++
Sbjct: 11 LIILTGLPSVGKSTFSKAISKKMAEKNIDNIILGTDLIRESFPV--------WKESYEEF 62
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLF----VNFRKIAVVVFPKPE 381
+ +N + L+ A + I+D TN + S R+ + + VN+ + P
Sbjct: 63 IRDSN---NYLIKEALENKFSVIVDDTNYYNSKRRDLMNIAKECNVNY---VTIYLKAPL 116
Query: 382 DLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFD 426
DL +KR E GK++P + + NM + DTPG+ +D
Sbjct: 117 DL---LLKRNIERGKKIPNEVIKNMYEKF------DTPGTKYAWD 152
>gi|358332463|dbj|GAA30691.2| ATP-dependent RNA helicase DDX1, partial [Clonorchis sinensis]
Length = 1041
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 68/156 (43%), Gaps = 31/156 (19%)
Query: 46 LNPADCD--LDFDIEDNGLKSSGLHQEGFAYCWSGARANVGI-NGGKYCFGCKIVSTQPV 102
+NPAD + I NG + G W G R N GI GGKY + K+
Sbjct: 443 VNPADVSSSTNLLISPNGRMVQAVANTG----WQGFRVNKGICGGGKYYYEVKV------ 492
Query: 103 DMEDTPPDQQHVCRVGTSR-------GDDPVGK-LGETEQSFGFGG-TGKFSHGGNFLNF 153
MED+ + R+G S G D G G FG G GK HG N+
Sbjct: 493 -MEDS-----GLARIGWSLDGANLDLGYDAFGYGFGADRDGFGITGHQGKKLHGDVIENY 546
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
GE FG D I C +DL++ + ++KNG+ G+A
Sbjct: 547 GEAFGKDDVIGCFLDLDT---GVVQWSKNGRLFGSA 579
>gi|389610073|dbj|BAM18648.1| Dead-box-1 [Papilio xuthus]
Length = 269
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 30/155 (19%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RA G++ + IV+ + +CRVG S + LG
Sbjct: 96 WHGCRATKGVHTKGAYYYEAIVT------------DEGLCRVGWSTQGARL-DLGTDRLG 142
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FG+GGTGK S+ F ++G+ +G D I C ++ + I + KNG+ LG A + D
Sbjct: 143 FGYGGTGKKSNAKQFDDYGDAYGKNDVIGCLLNFNN---GEIRYTKNGEDLGIAFKLDQS 199
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
++ C FP ++LKN + F
Sbjct: 200 -----------RKSDC---YFPAVVLKNAEMSFNF 220
>gi|241558628|ref|XP_002400271.1| DEAD-box protein, putative [Ixodes scapularis]
gi|215499753|gb|EEC09247.1| DEAD-box protein, putative [Ixodes scapularis]
Length = 722
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 109/261 (41%), Gaps = 53/261 (20%)
Query: 57 IEDNGLKSSGLHQEGFAYCWSGARANVGIN-GGKYCFGCKIVSTQPVDMEDTPPDQQHVC 115
+ NGL + Q+G W G R G+ GKY + K+ + +C
Sbjct: 84 VSPNGLTTQSRDQKG----WHGCRCTKGLQYRGKYYYESKVTD-------------EGLC 126
Query: 116 RVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLA 175
RVG S + LG Q FGFGGTGK S G F ++GE FG+ D I C +DL++
Sbjct: 127 RVGWSTLAASL-DLGTDRQGFGFGGTGKKSFGKQFDSYGEPFGMHDVIGCYLDLDA---G 182
Query: 176 TIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQG 235
TI F+KNG LG A Q + + S FP ++LKN M+F++
Sbjct: 183 TIKFSKNGIDLGEAFQ--------------IPQNLKRSPFFPAVVLKN--AEMEFNL--- 223
Query: 236 LIPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPASGKTTWAEKWVKDHPEKRY 295
G + DG F + + +V +G + A K VK+ P+
Sbjct: 224 -----GGTPFKHPPADG-------FVAVSEAPKECIVESTVTGTSVGAPKSVKNAPQAII 271
Query: 296 ILLGTNLILEQMKVPGLLRKH 316
I L + +K +KH
Sbjct: 272 IEPSRELAEQTLKCITSFKKH 292
>gi|348549942|ref|XP_003460792.1| PREDICTED: ATP-dependent RNA helicase DDX1-like, partial [Cavia
porcellus]
Length = 637
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RA G+ GK+ + + Q +CRVG S + LG +
Sbjct: 16 WHGCRATKGLMKGKHYY-------------EVSCHDQGLCRVGWSTMQASL-DLGTDKFG 61
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FGFGGTGK SH F N+GE+F + DTI C +D+E + F+KNGK LG A + A
Sbjct: 62 FGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIEK---GHVKFSKNGKDLGLAFEIPAH 118
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
A+FP +LKN + F E P
Sbjct: 119 MKN--------------QALFPACVLKNAELKFNFGEEDFKFP 147
>gi|256085678|ref|XP_002579041.1| hypothetical protein [Schistosoma mansoni]
Length = 1003
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 95/237 (40%), Gaps = 50/237 (21%)
Query: 5 KRELELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKS 64
++ LE P D P V ++ D VS+ R+ R +N D D+ +G +
Sbjct: 650 EQPLEFPP-DGPFIPVAQSADDSQVSN------RNPGWR--MNQYDATNALDVAPDGSQV 700
Query: 65 SGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD 123
Q F W G R+N GI G G++ F E TP + + RVG S D
Sbjct: 701 ----QSHFNQGWQGCRSNHGIRGLGRFYF------------EVTPIESTGLWRVGWST-D 743
Query: 124 DPVGKLGETEQSFGFGG----------TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKP 173
D +G + FG+G GK H N+GE F D I C +D
Sbjct: 744 DGNLIIGTDQYGFGYGADNEGFGLNGQQGKRIHCDEIENYGEAFSKDDVIGCFLDTIEH- 802
Query: 174 LATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
TI ++KNG G A Q + S + + +A++P + L N V + F
Sbjct: 803 --TIKWSKNGLEFGDAYQ----------IPSELLHSKNLTALYPTVSLLNSTVELNF 847
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 75/199 (37%), Gaps = 46/199 (23%)
Query: 49 ADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQPVDMEDT 107
ADC I+ GL + G W G RAN G+ G Y + +
Sbjct: 490 ADCTAGLGIDARGLDVASTRGAG----WQGCRANKGVKAPGAYYYEAACL---------- 535
Query: 108 PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFG----------GTGKFSHGGNFLNFGEKF 157
++ + RVG S D + +LG FG+G GTG+ H + ++G
Sbjct: 536 ---EEGLIRVGWSTNDANL-ELGADNYGFGYGSDAVGSAGINGTGRVMHRNSGHDYGIMV 591
Query: 158 GVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFP 217
GD I C +DL+ +I ++ NGK A + D E A P
Sbjct: 592 HQGDVIGCLLDLDK---GSISWSCNGKIFRRA---------FTIPDQLRGE-----AFLP 634
Query: 218 HILLKNVVVVMQFSVEQGL 236
LK+ ++ F EQ L
Sbjct: 635 AASLKDSRILFNFGEEQPL 653
>gi|360043680|emb|CCD81226.1| putative 4.1 G protein [Schistosoma mansoni]
Length = 1003
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 95/237 (40%), Gaps = 50/237 (21%)
Query: 5 KRELELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKS 64
++ LE P D P V ++ D VS+ R+ R +N D D+ +G +
Sbjct: 650 EQPLEFPP-DGPFIPVAQSADDSQVSN------RNPGWR--MNQYDATNALDVAPDGSQV 700
Query: 65 SGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD 123
Q F W G R+N GI G G++ F E TP + + RVG S D
Sbjct: 701 ----QSHFNQGWQGCRSNHGIRGLGRFYF------------EVTPIESTGLWRVGWST-D 743
Query: 124 DPVGKLGETEQSFGFGG----------TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKP 173
D +G + FG+G GK H N+GE F D I C +D
Sbjct: 744 DGNLIIGTDQYGFGYGADNEGFGLNGQQGKRIHCDEIENYGEAFSKDDVIGCFLDTIEH- 802
Query: 174 LATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
TI ++KNG G A Q + S + + +A++P + L N V + F
Sbjct: 803 --TIKWSKNGLEFGDAYQ----------IPSELLHSKNLTALYPTVSLLNSTVELNF 847
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 75/199 (37%), Gaps = 46/199 (23%)
Query: 49 ADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQPVDMEDT 107
ADC I+ GL + G W G RAN G+ G Y + +
Sbjct: 490 ADCTAGLGIDARGLDVASTRGAG----WQGCRANKGVKAPGAYYYEAACL---------- 535
Query: 108 PPDQQHVCRVGTSRGDDPVGKLGETEQSFGFG----------GTGKFSHGGNFLNFGEKF 157
++ + RVG S D + +LG FG+G GTG+ H + ++G
Sbjct: 536 ---EEGLIRVGWSTNDANL-ELGADNYGFGYGSDAVGSAGINGTGRVMHRNSGHDYGIMV 591
Query: 158 GVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFP 217
GD I C +DL+ +I ++ NGK A + D E A P
Sbjct: 592 HQGDVIGCLLDLDK---GSISWSCNGKIFRRA---------FTIPDQLRGE-----AFLP 634
Query: 218 HILLKNVVVVMQFSVEQGL 236
LK+ ++ F EQ L
Sbjct: 635 AASLKDSRILFNFGEEQPL 653
>gi|326916531|ref|XP_003204560.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX1-like [Meleagris gallopavo]
Length = 704
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GKY +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATRGVTKGKYYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F ++GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ I F+KNGK LG A +F A+F +LKN
Sbjct: 195 YLDIDK---GQIKFSKNGKDLGLAFEFPPHIRN--------------QALFAACVLKNAE 237
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALDDGNSV 255
+ F E P +GY A DGN V
Sbjct: 238 LKFNFGEEDFKFPPKDGYIGLCKA-PDGNVV 267
>gi|73979767|ref|XP_848865.1| PREDICTED: ATP-dependent RNA helicase DDX1 isoform 2 [Canis lupus
familiaris]
Length = 740
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 89/206 (43%), Gaps = 36/206 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALD 250
+ F E+ P +G+ + A D
Sbjct: 238 LKFNFGEEEFKFPPKDGFVALAKASD 263
>gi|410955874|ref|XP_003984574.1| PREDICTED: ATP-dependent RNA helicase DDX1 [Felis catus]
Length = 849
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 89/206 (43%), Gaps = 36/206 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 202 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 244
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 245 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 303
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 304 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 346
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALD 250
+ F E+ P +G+ + A D
Sbjct: 347 LKFNFGEEEFKFPPKDGFVALSKAAD 372
>gi|270003382|gb|EEZ99829.1| hypothetical protein TcasGA2_TC002610 [Tribolium castaneum]
Length = 4986
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 18/183 (9%)
Query: 9 ELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLH 68
E PD + +V KVDD + ++ + +++ + D + L +
Sbjct: 1009 EDPDMFRSPHLVPYIKVDDAIKKANRDTASETVRTLLVYGYNLDPPTGEQHEALLAEASR 1068
Query: 69 QEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVG 127
+ A N ++ GK+ F +I++ P+ RVG ++ D P
Sbjct: 1069 SRQAIFRTYRAEKNYAVSSGKWYFEFEILTAGPM-------------RVGWAKADCAPGC 1115
Query: 128 KLGETEQSFGFGGTG-KFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL 186
LG E ++ F G K HGG+ FG K+ VGD I C +DL + I F+ NG+ L
Sbjct: 1116 MLGSDENTWAFDGYNMKKIHGGSSETFGIKYIVGDVIGCFLDLIDR---IISFSLNGELL 1172
Query: 187 GTA 189
A
Sbjct: 1173 MDA 1175
>gi|281345540|gb|EFB21124.1| hypothetical protein PANDA_012202 [Ailuropoda melanoleuca]
Length = 686
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 39 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 81
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 82 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 140
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 141 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 183
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 184 LKFNFGEEEFKFP 196
>gi|260819158|ref|XP_002604904.1| hypothetical protein BRAFLDRAFT_279727 [Branchiostoma floridae]
gi|229290233|gb|EEN60914.1| hypothetical protein BRAFLDRAFT_279727 [Branchiostoma floridae]
Length = 733
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVG-INGGKYCFGCKIVSTQPVDM 104
+NP D L + +GL Q+ W G R+ G +N GKY + +
Sbjct: 84 INPYDRGLSLAVSPDGLLVQCREQKE----WHGGRSTKGVVNKGKYYYEATVTD------ 133
Query: 105 EDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTII 164
+ +CRVG S + LG + FGFGGTGK S G F +GE FG DTI
Sbjct: 134 -------EGLCRVGFSTSKANL-DLGTCKSGFGFGGTGKKSFGRQFDTYGEPFGKNDTIG 185
Query: 165 CAIDLESKPLATIGFAKNGKWLGTA 189
C +DL++ TI ++KNG LG A
Sbjct: 186 CYLDLDN---GTISYSKNGSDLGIA 207
>gi|291387112|ref|XP_002710081.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Oryctolagus
cuniculus]
Length = 740
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + A A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFEVPAHMKN--------------QALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|115495959|ref|NP_001068936.1| ATP-dependent RNA helicase DDX1 [Bos taurus]
gi|122145292|sp|Q0IIK5.1|DDX1_BOVIN RecName: Full=ATP-dependent RNA helicase DDX1; AltName: Full=DEAD
box protein 1
gi|113911791|gb|AAI22600.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Bos taurus]
gi|296482276|tpg|DAA24391.1| TPA: ATP-dependent RNA helicase DDX1 [Bos taurus]
Length = 740
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|152941234|gb|ABS45054.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Bos taurus]
Length = 749
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 102 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 144
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 145 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 203
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 204 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 246
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 247 LKFNFGEEEFKFP 259
>gi|45383053|ref|NP_989894.1| ATP-dependent RNA helicase DDX1 [Gallus gallus]
gi|82245414|sp|Q90WU3.1|DDX1_CHICK RecName: Full=ATP-dependent RNA helicase DDX1; AltName: Full=DEAD
box protein 1
gi|16323037|gb|AAL15417.1| DEAD box protein DDX1 [Gallus gallus]
Length = 740
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GKY +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATRGVTKGKYYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F ++GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ I F+KNGK LG A +F A+F +LKN
Sbjct: 195 YLDIDK---GQIKFSKNGKDLGLAFEFPPHIRN--------------QALFAACVLKNAE 237
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALDDGNSV 255
+ F E P +GY A DGN V
Sbjct: 238 LKFNFGEEDFKFPPKDGYIGLCKA-PDGNVV 267
>gi|456753031|gb|JAA74081.1| DEAD (Asp-Glu-Ala-Asp) box helicase 1 [Sus scrofa]
Length = 740
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|301775390|ref|XP_002923115.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Ailuropoda
melanoleuca]
Length = 740
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|348550003|ref|XP_003460822.1| PREDICTED: ATP-dependent RNA helicase DDX1-like, partial [Cavia
porcellus]
Length = 502
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RA G+ GK+ + + Q +CRVG S + LG +
Sbjct: 119 WHGCRATKGLMKGKHYY-------------EVSCHDQGLCRVGWSTMQASL-DLGTDKFG 164
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FGFGGTGK SH F N+GE+F + DTI C +D+E + F+KNGK LG A + A
Sbjct: 165 FGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIEK---GHVKFSKNGKDLGLAFEIPA- 220
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
A+FP +LKN + F E P
Sbjct: 221 -------------HMKNQALFPACVLKNAELKFNFGEEDFKFP 250
>gi|440909942|gb|ELR59794.1| ATP-dependent RNA helicase DDX1, partial [Bos grunniens mutus]
Length = 737
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 90 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 132
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 133 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 191
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 192 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 234
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 235 LKFNFGEEEFKFP 247
>gi|348506467|ref|XP_003440780.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Oreochromis
niloticus]
Length = 740
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 76/163 (46%), Gaps = 25/163 (15%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + W G R+ G+ GKY +
Sbjct: 93 MNPYDRSTAFAIGSDGLCCQSREFKE------WHGCRSTKGVTKGKYYY----------- 135
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
E T DQ +CRVG S + LG + FGFGGTGK S+ F ++GE+F + DTI
Sbjct: 136 -EVTCHDQG-LCRVGWSTSQAAL-DLGTDKYGFGFGGTGKKSNNKQFDSYGEEFTMHDTI 192
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAV 206
C +DLE + I F+KNG LG A + G S V
Sbjct: 193 GCYVDLEK---SQISFSKNGNDLGVAFEIPQNLKNQGFFASCV 232
>gi|355683224|gb|AER97054.1| DEAD box polypeptide 1 [Mustela putorius furo]
Length = 734
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 88 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 130
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 131 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 189
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 190 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 232
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 233 LKFNFGEEEFKFP 245
>gi|354481105|ref|XP_003502743.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Cricetulus
griseus]
Length = 740
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 86/193 (44%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATRGLLKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + A +K + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFEIPA----------HIKNQ----ALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|150402658|ref|YP_001329952.1| chromatin associated protein KTI12 [Methanococcus maripaludis C7]
gi|150033688|gb|ABR65801.1| Chromatin associated protein KTI12 [Methanococcus maripaludis C7]
Length = 257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 23/162 (14%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRY--ILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++ GLP+ GK+T+++ K EK I+LGT+L+ E V + E ++
Sbjct: 2 LIILTGLPSVGKSTFSKAISKKMAEKNIDNIILGTDLVRESFPV--------WKESYEEF 53
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK-PEDLK 384
+ +N+ L+ A + I+D TN + S R+ + + V ++ K P DL
Sbjct: 54 IRDSNS---YLIKNALENNFSVIVDDTNYYNSKRRDLMNIAKECDNNYVTIYLKAPLDL- 109
Query: 385 IRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFD 426
+KR E G+++P + + NM + DTPG+ +D
Sbjct: 110 --LLKRNIERGQKIPNEVIKNMYEKF------DTPGTKYAWD 143
>gi|45359053|ref|NP_988610.1| ATP/GTP-binding motif-containing protein [Methanococcus maripaludis
S2]
gi|74553663|sp|Q6LX62.1|PSTK_METMP RecName: Full=L-seryl-tRNA(Sec) kinase; AltName:
Full=O-phosphoseryl-tRNA(Sec) kinase; Short=PSTK
gi|45047928|emb|CAF31046.1| ATP/GTP-binding site motif A (P-loop) [Methanococcus maripaludis
S2]
Length = 255
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 23/162 (14%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRY--ILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++ GLP+ GK+T+++ + K EK I+LGT+LI E V + E ++
Sbjct: 2 LIILTGLPSVGKSTFSKAFSKKMAEKNIDNIILGTDLIRESFPV--------WKESYEEF 53
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK-PEDLK 384
+ +N + L+ A + I+D TN + S R+ + + V ++ K P +L
Sbjct: 54 IRDSN---NYLIKEALENKFSVIVDDTNYYNSKRRDLMNIAKECDTNYVTIYLKAPLNL- 109
Query: 385 IRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFD 426
+KR E G+++P + + NM + DTPG+ +D
Sbjct: 110 --LLKRNIERGQKIPNEVIKNMYEKF------DTPGTKYAWD 143
>gi|350582696|ref|XP_003354965.2| PREDICTED: ATP-dependent RNA helicase DDX1 [Sus scrofa]
Length = 732
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSSMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|150399550|ref|YP_001323317.1| chromatin associated protein KTI12 [Methanococcus vannielii SB]
gi|150012253|gb|ABR54705.1| Chromatin associated protein KTI12 [Methanococcus vannielii SB]
Length = 260
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 25/158 (15%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRY--ILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++ GLP+ GK+T+++ K EK I+LGT+L+ E + + E ++
Sbjct: 2 IIILTGLPSVGKSTFSKTISKKMSEKNMDNIILGTDLLRESFPI--------WKESYEKY 53
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKP--EDL 383
+ +N L+ +A + I+D TN + S R+ + + ++ + + ++ K L
Sbjct: 54 IRDSNT---YLIKKALENKFSVIVDDTNYYNSKRRDLINIAKSYDTVYITIYLKAPLNIL 110
Query: 384 KIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGS 421
R+V+R G+++P + + +M + DTPGS
Sbjct: 111 LTRNVQR----GQKIPNEVIKDMYEKF------DTPGS 138
>gi|297620133|ref|YP_003708238.1| L-seryl-tRNA(Sec) kinase [Methanococcus voltae A3]
gi|297379110|gb|ADI37265.1| L-seryl-tRNA(Sec) kinase [Methanococcus voltae A3]
Length = 280
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRY--ILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++M+VGLP+ GK+T+++ K EK + I+LGT+LI E V + E+++
Sbjct: 2 LIMLVGLPSVGKSTFSKNLSKKLSEKNFDNIILGTDLIRESFPV--------WKEKYEDY 53
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK-PED-L 383
+ + N + L+S A IID TN + S R+ + + + K + ++ K P D L
Sbjct: 54 IKKMN---NYLISEALNEGFTVIIDDTNYYNSKRRDLMHMANSKNKNCISIYLKAPLDVL 110
Query: 384 KIRSVKRFKEMGKEVPADAVNNMLANY 410
R++ R G ++P + +M + +
Sbjct: 111 LTRNIAR----GAKIPNSVIEDMYSKF 133
>gi|61097941|ref|NP_445866.1| ATP-dependent RNA helicase DDX1 [Rattus norvegicus]
gi|76364171|sp|Q641Y8.1|DDX1_RAT RecName: Full=ATP-dependent RNA helicase DDX1; AltName: Full=DEAD
box protein 1
gi|51980333|gb|AAH82049.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Rattus norvegicus]
gi|149050941|gb|EDM03114.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1, isoform CRA_a [Rattus
norvegicus]
Length = 740
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 86/193 (44%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATRGLLRGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + A +K + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFEIPA----------HIKNQ----ALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|426223158|ref|XP_004005744.1| PREDICTED: ATP-dependent RNA helicase DDX1 isoform 2 [Ovis aries]
Length = 659
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 12 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 54
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 55 EVSCHDQGLCRVGWSTMQACL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 113
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 114 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 156
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 157 LKFNFGEEEFKFP 169
>gi|326205203|dbj|BAJ83987.1| ATP-dependent RNA helicase DDX1 [Homo sapiens]
Length = 659
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 12 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 54
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 55 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 113
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 114 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 156
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 157 LKFNFGEEEFKFP 169
>gi|426223156|ref|XP_004005743.1| PREDICTED: ATP-dependent RNA helicase DDX1 isoform 1 [Ovis aries]
Length = 740
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLTKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQACL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|390474746|ref|XP_003734837.1| PREDICTED: ATP-dependent RNA helicase DDX1 [Callithrix jacchus]
Length = 659
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 12 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 54
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 55 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 113
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 114 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 156
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 157 LKFNFGEEEFKFP 169
>gi|539572|pir||A47743 DEAD box protein RB - human
gi|741030|prf||2006288A DEAD box protein
Length = 739
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 87 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 129
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 130 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 188
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 189 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 231
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 232 LKFNFGEEEFKFP 244
>gi|403288124|ref|XP_003935264.1| PREDICTED: ATP-dependent RNA helicase DDX1 [Saimiri boliviensis
boliviensis]
Length = 740
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|386767559|ref|NP_001246210.1| ryanodine receptor 44F, isoform H [Drosophila melanogaster]
gi|383302350|gb|AFH07965.1| ryanodine receptor 44F, isoform H [Drosophila melanogaster]
Length = 5130
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1090 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1136
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1137 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1193
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1194 TAEGVGFV 1201
>gi|296224457|ref|XP_002758066.1| PREDICTED: ATP-dependent RNA helicase DDX1 isoform 2 [Callithrix
jacchus]
Length = 740
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|332247332|ref|XP_003272810.1| PREDICTED: ATP-dependent RNA helicase DDX1 isoform 1 [Nomascus
leucogenys]
Length = 740
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|332812640|ref|XP_001162067.2| PREDICTED: ATP-dependent RNA helicase DDX1 isoform 4 [Pan
troglodytes]
gi|397513460|ref|XP_003827031.1| PREDICTED: ATP-dependent RNA helicase DDX1 [Pan paniscus]
gi|410223726|gb|JAA09082.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Pan troglodytes]
gi|410256450|gb|JAA16192.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Pan troglodytes]
gi|410296776|gb|JAA26988.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Pan troglodytes]
gi|410330277|gb|JAA34085.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Pan troglodytes]
Length = 740
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|388453195|ref|NP_001253491.1| ATP-dependent RNA helicase DDX1 [Macaca mulatta]
gi|75076756|sp|Q4R7L5.1|DDX1_MACFA RecName: Full=ATP-dependent RNA helicase DDX1; AltName: Full=DEAD
box protein 1
gi|67969104|dbj|BAE00907.1| unnamed protein product [Macaca fascicularis]
gi|380783687|gb|AFE63719.1| ATP-dependent RNA helicase DDX1 [Macaca mulatta]
gi|383409477|gb|AFH27952.1| ATP-dependent RNA helicase DDX1 [Macaca mulatta]
gi|384942942|gb|AFI35076.1| ATP-dependent RNA helicase DDX1 [Macaca mulatta]
Length = 740
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|386767551|ref|NP_001246206.1| ryanodine receptor 44F, isoform J [Drosophila melanogaster]
gi|383302346|gb|AFH07961.1| ryanodine receptor 44F, isoform J [Drosophila melanogaster]
Length = 5115
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|355565471|gb|EHH21900.1| hypothetical protein EGK_05066, partial [Macaca mulatta]
gi|355751117|gb|EHH55372.1| hypothetical protein EGM_04571, partial [Macaca fascicularis]
Length = 737
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 90 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 132
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 133 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 191
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 192 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 234
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 235 LKFNFGEEEFKFP 247
>gi|197100632|ref|NP_001127099.1| ATP-dependent RNA helicase DDX1 [Pongo abelii]
gi|75070333|sp|Q5NVJ8.1|DDX1_PONAB RecName: Full=ATP-dependent RNA helicase DDX1; AltName: Full=DEAD
box protein 1
gi|56403752|emb|CAI29665.1| hypothetical protein [Pongo abelii]
Length = 740
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|4826686|ref|NP_004930.1| ATP-dependent RNA helicase DDX1 [Homo sapiens]
gi|426334776|ref|XP_004028913.1| PREDICTED: ATP-dependent RNA helicase DDX1 [Gorilla gorilla
gorilla]
gi|6919862|sp|Q92499.2|DDX1_HUMAN RecName: Full=ATP-dependent RNA helicase DDX1; AltName: Full=DEAD
box protein 1; AltName: Full=DEAD box protein
retinoblastoma; Short=DBP-RB
gi|3123574|emb|CAA49992.1| member of DEAD box protein family [Homo sapiens]
gi|15082428|gb|AAH12132.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens]
gi|31565475|gb|AAH53673.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens]
gi|119621302|gb|EAX00897.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1, isoform CRA_d [Homo
sapiens]
gi|126021220|gb|ABN70940.1| DEAD box polypeptide 1 [Homo sapiens]
gi|126021222|gb|ABN70941.1| DEAD box polypeptide 1 [Homo sapiens]
gi|189054132|dbj|BAG36652.1| unnamed protein product [Homo sapiens]
gi|261858860|dbj|BAI45952.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [synthetic construct]
gi|326205199|dbj|BAJ83985.1| ATP-dependent RNA helicase DDX1 [Homo sapiens]
gi|326205201|dbj|BAJ83986.1| ATP-dependent RNA helicase DDX1 [Homo sapiens]
gi|326205205|dbj|BAJ83988.1| ATP-dependent RNA helicase DDX1 [Homo sapiens]
Length = 740
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|386767557|ref|NP_001246209.1| ryanodine receptor 44F, isoform G [Drosophila melanogaster]
gi|383302349|gb|AFH07964.1| ryanodine receptor 44F, isoform G [Drosophila melanogaster]
Length = 5123
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|195427109|ref|XP_002061621.1| GK17090 [Drosophila willistoni]
gi|194157706|gb|EDW72607.1| GK17090 [Drosophila willistoni]
Length = 729
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 33/169 (19%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G R G+ G GK+ + + + +CRVG S + LG
Sbjct: 118 WHGCRGTTGVRGKGKFYYEATVTD-------------EGLCRVGWSTQQAKL-DLGTCRF 163
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+ + I F KNG+ LG A +
Sbjct: 164 GFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLQR---SEISFTKNGQHLGVAFK--- 217
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF-SVEQGLIPVEGY 242
+ E + +P ++LKN + F E P GY
Sbjct: 218 -----------IPENMSKETFYPALVLKNAEMAFNFGKTELKYHPGNGY 255
>gi|119621301|gb|EAX00896.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1, isoform CRA_c [Homo
sapiens]
Length = 377
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|119621300|gb|EAX00895.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1, isoform CRA_b [Homo
sapiens]
Length = 677
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|195474825|ref|XP_002089690.1| GE19231 [Drosophila yakuba]
gi|194175791|gb|EDW89402.1| GE19231 [Drosophila yakuba]
Length = 5127
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|386767555|ref|NP_001246208.1| ryanodine receptor 44F, isoform F [Drosophila melanogaster]
gi|383302348|gb|AFH07963.1| ryanodine receptor 44F, isoform F [Drosophila melanogaster]
Length = 5119
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|17352465|ref|NP_476991.1| ryanodine receptor 44F, isoform A [Drosophila melanogaster]
gi|33112444|sp|Q24498.3|RY44_DROME RecName: Full=Ryanodine receptor 44F
gi|21645558|gb|AAF59036.2| ryanodine receptor 44F, isoform A [Drosophila melanogaster]
Length = 5127
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|17352467|ref|NP_476992.1| ryanodine receptor 44F, isoform B [Drosophila melanogaster]
gi|21645559|gb|AAM71082.1| ryanodine receptor 44F, isoform B [Drosophila melanogaster]
Length = 5113
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|2160478|dbj|BAA04212.1| ryanodine receptor homologue [Drosophila melanogaster]
Length = 5112
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1085 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1131
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1132 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1188
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1189 TAEGVGFV 1196
>gi|456984|gb|AAB29457.1| ryanodine receptor, calcium release channel [Drosophila melanogaster,
Peptide, 5126 aa]
gi|2160475|dbj|BAA41469.1| ryanodine receptor homologue [Drosophila melanogaster]
Length = 5126
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1085 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1131
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1132 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1188
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1189 TAEGVGFV 1196
>gi|395760124|gb|AFN70719.1| ryanodine receptor [Chilo suppressalis]
Length = 5128
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 18/183 (9%)
Query: 9 ELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLH 68
E P+ + +V KVDD + ++ + +++ + D + L
Sbjct: 1013 EDPEMHRSPHLVPYPKVDDAIKKANRDTASETVRTLLVYGYNLDPPTGEQHEALLLEASK 1072
Query: 69 QEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVG 127
Q+ + A N ++ GK+ F +I++T P+ RVG + D P
Sbjct: 1073 QKQADFRTYRAEKNYAVSSGKWYFEFEILTTGPM-------------RVGWAHADMAPGM 1119
Query: 128 KLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL 186
LG+ E S+ F G + + G+ +FG+++ VGD + +DL K TI F+ NG+ L
Sbjct: 1120 MLGQDENSWAFDGYNEEKVYSGSTESFGKQWAVGDVVWVFLDLIDK---TISFSLNGELL 1176
Query: 187 GTA 189
A
Sbjct: 1177 MDA 1179
>gi|198463630|ref|XP_001352892.2| GA21506 [Drosophila pseudoobscura pseudoobscura]
gi|198151343|gb|EAL30393.2| GA21506 [Drosophila pseudoobscura pseudoobscura]
Length = 728
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 32/156 (20%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G GK+ F +T + +CRVG S + LG
Sbjct: 118 WHGCRATTGVRGKGKFYF-------------ETTVTDEGLCRVGWSTQQANL-DLGTCRH 163
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+ ++ F KNG+ LG A +
Sbjct: 164 GFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLQRLEMS---FTKNGQSLGVAFR--- 217
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
V E + +P ++LKN ++ F
Sbjct: 218 -----------VPENLSKETFYPAVVLKNAEMLFNF 242
>gi|195172867|ref|XP_002027217.1| GL25427 [Drosophila persimilis]
gi|194113038|gb|EDW35081.1| GL25427 [Drosophila persimilis]
Length = 728
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 70/156 (44%), Gaps = 32/156 (20%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G GK+ F +T + +CRVG S + LG
Sbjct: 118 WHGCRATTGVRGKGKFYF-------------ETTVTDEGLCRVGWSTQQANL-DLGTCRH 163
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+ + F KNG+ LG A +
Sbjct: 164 GFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLQR---LEVSFTKNGQSLGVAFR--- 217
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
V E + +P ++LKN ++ F
Sbjct: 218 -----------VPENLSKETFYPAVVLKNAEMLFNF 242
>gi|410916277|ref|XP_003971613.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Takifugu rubripes]
Length = 734
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 72/146 (49%), Gaps = 25/146 (17%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + W G R+ G+ GKY +
Sbjct: 87 MNPYDRSPAFAIGPDGLCCQSREFKE------WHGCRSTKGVTKGKYYY----------- 129
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
E T DQ +CR+G S + LG + FGFGGTGK S+ F ++GE+F + DTI
Sbjct: 130 -EVTCHDQG-LCRIGWSTSQAAL-DLGTDKYGFGFGGTGKKSNNKQFDSYGEEFTMHDTI 186
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTA 189
C +DLE A I F+KNG LG A
Sbjct: 187 GCYLDLEQ---AQISFSKNGTDLGLA 209
>gi|344250621|gb|EGW06725.1| ATP-dependent RNA helicase DDX1 [Cricetulus griseus]
Length = 584
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 76/163 (46%), Gaps = 31/163 (19%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RA G+ GK+ + + Q +CRVG S + LG +
Sbjct: 93 WHGCRATRGLLKGKHYY-------------EVSCHDQGLCRVGWSTMQASL-DLGTDKFG 138
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FGFGGTGK SH F N+GE+F + DTI C +D++ + F+KNGK LG A + A
Sbjct: 139 FGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK---GHVKFSKNGKDLGLAFEIPA- 194
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
+K + A+FP +LKN + F E+ P
Sbjct: 195 ---------HIKNQ----ALFPACVLKNAELKFNFGEEEFKFP 224
>gi|195332594|ref|XP_002032982.1| GM21070 [Drosophila sechellia]
gi|194124952|gb|EDW46995.1| GM21070 [Drosophila sechellia]
Length = 3814
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|196004212|ref|XP_002111973.1| hypothetical protein TRIADDRAFT_24752 [Trichoplax adhaerens]
gi|190585872|gb|EDV25940.1| hypothetical protein TRIADDRAFT_24752 [Trichoplax adhaerens]
Length = 734
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 43 RVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPV 102
+V LNP D I+ +GL G +E F W G R+N+G+ GK+ +
Sbjct: 91 KVKLNPFDRSDQLAIDKDGLICQG--REHFQ--WLGCRSNIGVVKGKFYY---------- 136
Query: 103 DMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDT 162
E T D+ +CRVG S D LG FGFGGTGK S+ F +GE FG D
Sbjct: 137 --EATVTDEG-LCRVGWST-DIASLDLGTDNNGFGFGGTGKKSYARQFDGYGEPFGHKDV 192
Query: 163 IICAIDLESKPLATIGFAKNGKWLGTA 189
I C +DL++ I F+KNG G A
Sbjct: 193 IGCMLDLDN---YEIRFSKNGVDFGRA 216
>gi|343178392|emb|CBZ42223.1| hypothetical protein [Campylobacter phage CP81]
Length = 353
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL-- 325
+ M++G+P GK+T ++ + ++ ++++ K L + YSE + L
Sbjct: 196 ITMLIGVPGVGKSTLCNQY-------KNVISRDDILMSYGKTKFNL--NTYSEIWSKLSQ 246
Query: 326 --MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLR---LFVNFRKIAVVVFPKP 380
+ IF L+R + ++ +ID+TN +RK L L N+ K+A+V+
Sbjct: 247 DDQKEIDNIFKFKLNRLLQQGKDIVIDKTNTSMKSRKSLLNSSSLIKNYNKVAIVMLCPY 306
Query: 381 EDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ R KR E GKEV D V+N + + LP
Sbjct: 307 NTILERIKKRSLETGKEVSKDIVDNFIKSMCLP 339
>gi|194752973|ref|XP_001958793.1| GF12384 [Drosophila ananassae]
gi|190620091|gb|EDV35615.1| GF12384 [Drosophila ananassae]
Length = 5111
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F ++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTAGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|195380289|ref|XP_002048903.1| GJ21297 [Drosophila virilis]
gi|194143700|gb|EDW60096.1| GJ21297 [Drosophila virilis]
Length = 5131
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F ++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTAGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
H G +FG ++ GD I C ID++ + TI F+ NG+ L G D
Sbjct: 1133 HNVTKMHAGTIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|119621303|gb|EAX00898.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1, isoform CRA_e [Homo
sapiens]
Length = 262
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 237
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 238 LKFNFGEEEFKFP 250
>gi|309243086|ref|NP_001184253.1| ATP-dependent RNA helicase DDX1 [Danio rerio]
Length = 740
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + W G R + G+Y +
Sbjct: 93 MNPFDRSTAFAIGSDGLCCQSREFKE------WHGCRTTKAVTKGRYYY----------- 135
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ Q +CRVG S + LG + FGFGGTGK SH F ++GE+F + DTI
Sbjct: 136 --EVACHDQGLCRVGWSTAQASL-DLGTDKYGFGFGGTGKKSHNKQFDSYGEEFTMHDTI 192
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTA 189
C IDLE + F+KNG LG A
Sbjct: 193 GCYIDLEK---GHVSFSKNGNDLGLA 215
>gi|194391060|dbj|BAG60648.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 73/163 (44%), Gaps = 31/163 (19%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RA G+ GK+ + + Q +CRVG S + LG +
Sbjct: 103 WHGCRATKGLMKGKHYY-------------EVSCHDQGLCRVGWSTMQASL-DLGTDKFG 148
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FGFGGTGK SH F N+GE+F + DTI C +D++ + F+KNGK LG A +
Sbjct: 149 FGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK---GHVKFSKNGKDLGLAFE---- 201
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
+ A+FP +LKN + F E+ P
Sbjct: 202 ----------IPPHMKNQALFPACVLKNAELKFNFGEEEFKFP 234
>gi|363738454|ref|XP_003642012.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Gallus gallus]
Length = 1306
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDLE
Sbjct: 157 CRFNQEEG------VGDTPDSYAYDGNRVRKWNVTTTNYGKSWAAGDIVSCLIDLEE--- 207
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
TI F NG LGTA FD + G G+ A FP I L V F
Sbjct: 208 GTIAFCLNGISLGTA--FDNITRGAGM------------AYFPAISLSFKESVAFNFGSR 253
Query: 234 QGLIPVEGYK 243
PVEGY+
Sbjct: 254 PLRYPVEGYR 263
>gi|281206228|gb|EFA80417.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 671
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 87/226 (38%), Gaps = 76/226 (33%)
Query: 17 ESVVKKAKVDDPVSDSSASGPRSQK-----QRVVLNPADCDLDFDIEDNGLKSSGLHQEG 71
E++ KKA V P+ + S + Q++ + D D D I+ GL +
Sbjct: 66 ETINKKAAV--PIESAEQSDANDESTGGGVQQLAWSLEDRDKDLSID-------GLVCQS 116
Query: 72 FAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG-----TSRGDDPV 126
A WSG RA GI+ GKY + E T D + +CRVG +SR
Sbjct: 117 RAADWSGGRATRGISKGKYYY------------EATVRD-EGLCRVGWALKRSSRS---- 159
Query: 127 GKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL 186
+G + S+G+GGTGK SH DL+ +IGF KNG
Sbjct: 160 --IGTDKYSWGYGGTGKKSHE--------------------DLDE---GSIGFTKNGNDF 194
Query: 187 GTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSV 232
G A + + +P +LLKN + F+
Sbjct: 195 GEAYHLNTPKGAI---------------FYPALLLKNAEISFSFTT 225
>gi|307178709|gb|EFN67323.1| Ryanodine receptor 44F [Camponotus floridanus]
Length = 1817
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 20/130 (15%)
Query: 62 LKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSR 121
L++S L Q+ F + ++ GK+ F ++++ P+ RVG ++
Sbjct: 928 LEASKLRQQSFRT--YRVEKHYAVSNGKWYFEFEVLTAGPM-------------RVGWAK 972
Query: 122 GD-DPVGKLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGF 179
D P LG E ++ F G H G +FG ++ VGD + C ID+ + TI F
Sbjct: 973 ADCTPGNMLGSDENTWAFDGYNVTKVHAGTHESFGHRYQVGDIVGCFIDVADR---TISF 1029
Query: 180 AKNGKWLGTA 189
+ NG+ L A
Sbjct: 1030 SLNGELLMDA 1039
>gi|19527256|ref|NP_598801.1| ATP-dependent RNA helicase DDX1 [Mus musculus]
gi|76364170|sp|Q91VR5.1|DDX1_MOUSE RecName: Full=ATP-dependent RNA helicase DDX1; AltName: Full=DEAD
box protein 1
gi|14714934|gb|AAH10624.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Mus musculus]
gi|26390412|dbj|BAC25893.1| unnamed protein product [Mus musculus]
gi|74142302|dbj|BAE31914.1| unnamed protein product [Mus musculus]
gi|74145343|dbj|BAE36130.1| unnamed protein product [Mus musculus]
gi|148666036|gb|EDK98452.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Mus musculus]
Length = 740
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 92/207 (44%), Gaps = 36/207 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G R G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRGTRGLLKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + A +K + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFEIPA----------HIKNQ----ALFPACVLKNAE 237
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALDD 251
+ F E+ P +G+ + A D+
Sbjct: 238 LKFNFGEEEFKFPPKDGFVALSKAPDN 264
>gi|449498159|ref|XP_002198467.2| PREDICTED: ATP-dependent RNA helicase DDX1 [Taeniopygia guttata]
Length = 832
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 70/146 (47%), Gaps = 25/146 (17%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + + W G RA G+ GKY +
Sbjct: 185 MNPYDRGSAFAIGSDGLCCQSREIKE------WHGCRATRGVTKGKYYY----------- 227
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ Q +CRVG S + LG + FGFGGTGK SH F ++GE+F + DTI
Sbjct: 228 --EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTI 284
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTA 189
C +D E I F+KNGK LG A
Sbjct: 285 GCYLDTEK---GQIKFSKNGKDLGLA 307
>gi|449283693|gb|EMC90298.1| ATP-dependent RNA helicase DDX1, partial [Columba livia]
Length = 740
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 92/211 (43%), Gaps = 37/211 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GKY +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATRGVTKGKYYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F ++GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ I F+KNGK LG A + + ++ + A+F +LKN
Sbjct: 195 YLDIDK---GQIKFSKNGKDLGLAFE----------IPPHIRNQ----ALFAACVLKNAE 237
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALDDGNSV 255
+ F E P +GY A DGN V
Sbjct: 238 LKFNFGEEDFKFPPKDGYIGLCKA-PDGNVV 267
>gi|383865900|ref|XP_003708410.1| PREDICTED: ATP-dependent RNA helicase Ddx1-like [Megachile
rotundata]
Length = 735
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 77/174 (44%), Gaps = 34/174 (19%)
Query: 60 NGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGT 119
+GL+ Q+ W G RAN G+ G + F E T D+ +CRVG
Sbjct: 109 DGLRCQSREQKE----WHGCRANRGVQGKEKFF-----------FEATVTDEG-LCRVGW 152
Query: 120 SRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGF 179
S + LG + FGFGGTGK S+ F N+GE FG+ D I C +DL I F
Sbjct: 153 STAQASL-DLGTDKFGFGFGGTGKKSNAKQFDNYGEAFGMHDVIGCYLDLSK---GEIKF 208
Query: 180 AKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVE 233
+KNG LG A +A +Q FP ++LKN + F +
Sbjct: 209 SKNGVDLGAAFTLNA--------------QQKSQIYFPAVVLKNAEMSFNFGAQ 248
>gi|195496689|ref|XP_002095800.1| GE22606 [Drosophila yakuba]
gi|194181901|gb|EDW95512.1| GE22606 [Drosophila yakuba]
Length = 727
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 75/157 (47%), Gaps = 34/157 (21%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G GK+ F E T D+ +CRVG S + LG
Sbjct: 117 WHGCRATSGVRGKGKFYF------------EATVTDEG-LCRVGWSTQQANL-DLGTCRF 162
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+ + + F+KNG+ LG A
Sbjct: 163 GFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLQRQ---EVSFSKNGQNLGVA----- 214
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFS 231
+ D+ KE +P ++LKN MQF+
Sbjct: 215 ----FRLPDNLAKE-----TFYPAVVLKN--AEMQFN 240
>gi|389568469|gb|AFK84958.1| ryanodine receptor [Chilo suppressalis]
Length = 5133
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 18/183 (9%)
Query: 9 ELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLH 68
E P+ + +V KVDD + ++ + +++ + D + L
Sbjct: 1018 EDPEMHRSPHLVPYPKVDDAIKKANRDTASETVRTLLVYGYNLDPPTGEQHEALLLEASK 1077
Query: 69 QEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVG 127
Q+ + A N ++ GK+ F +I++T P+ RVG + D P
Sbjct: 1078 QKQADFRTYRAEKNYAVSSGKWYFEFEILTTGPM-------------RVGWAHADMAPGM 1124
Query: 128 KLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL 186
LG+ E S+ F G + + G+ +FG+++ VGD + +DL K TI F+ NG+ L
Sbjct: 1125 MLGQDENSWAFDGYNEEKVYSGSTESFGKQWAVGDVVGVFLDLIDK---TISFSLNGELL 1181
Query: 187 GTA 189
A
Sbjct: 1182 MDA 1184
>gi|194389932|dbj|BAG60482.1| unnamed protein product [Homo sapiens]
Length = 529
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 82/193 (42%), Gaps = 35/193 (18%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G RA G+ GK+ +
Sbjct: 1 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRATKGLMKGKHYY------------- 43
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 44 EVSCHDHGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 102
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + + A+FP +LKN
Sbjct: 103 YLDIDK---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAE 145
Query: 226 VVMQFSVEQGLIP 238
+ F E+ P
Sbjct: 146 LKFNFGEEEFKFP 158
>gi|427778715|gb|JAA54809.1| Putative dead asp-glu-ala-asp box polypeptide 1 [Rhipicephalus
pulchellus]
Length = 802
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 36/175 (20%)
Query: 57 IEDNGLKSSGLHQEGFAYCWSGARANVGI-NGGKYCFGCKIVSTQPVDMEDTPPDQQHVC 115
+ +GL + Q+G W G R G+ + GKY + K+ + +C
Sbjct: 120 VSPDGLTTQSRDQKG----WHGCRCTKGVQHRGKYYYEAKVTD-------------EGLC 162
Query: 116 RVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLA 175
RVG S + LG +Q FGFGGTGK S G F ++GE FG+ D I C +DL++
Sbjct: 163 RVGWSTQAASL-DLGTDKQGFGFGGTGKKSFGKQFDSYGEPFGMHDVIGCYLDLDN---G 218
Query: 176 TIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
+I F+KNG A Q + + +FP ++LKN + F
Sbjct: 219 SIKFSKNGTVFEEAYQ--------------IPQNLKRCPLFPAVVLKNAEMEFNF 259
>gi|338811708|ref|ZP_08623913.1| polyA polymerase related protein [Acetonema longum DSM 6540]
gi|337276245|gb|EGO64677.1| polyA polymerase related protein [Acetonema longum DSM 6540]
Length = 385
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 267 EVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLM 326
EV++M GLPA+GK TW + P ++ + + +++K+ + Q
Sbjct: 241 EVILMSGLPAAGKDTWVARHCAGLP-----VVSLDRLRQELKIAP---DEEQGQVVQAAK 292
Query: 327 GRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLKI 385
RA R R F+ + TN+ ++ R++ + LF + ++ +V P L +
Sbjct: 293 ERARQFL--------RDQRPFVWNATNISRATRRQLIALFTAYGARVKIVYLEVPYALLL 344
Query: 386 RSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPG 420
R R +E VP A++ M+ +PV + P
Sbjct: 345 R---RNRERSAPVPEKAIHRMIHKLEVPVLTEAPS 376
>gi|371671005|ref|YP_004956961.1| unnamed protein product [Campylobacter phage CPX]
gi|356649849|gb|AET34392.1| putative poly A polymerase [Campylobacter phage CPX]
Length = 353
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL-- 325
+ M++G+P GK+T ++ + ++ ++++ K L + YSE + L
Sbjct: 196 ITMLIGVPGVGKSTLCNQY-------KNVISRDDILMSYGKTKFNL--NTYSEIWSKLSQ 246
Query: 326 --MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLR---LFVNFRKIAVVVFPKP 380
+ IF L+R + ++ +ID+TN +RK L L N+ K+++V+
Sbjct: 247 DDQKEIDNIFKFKLNRLLQQGKDIVIDKTNTSMKSRKSLLNSSSLIKNYNKVSIVMLCPY 306
Query: 381 EDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ R KR E GKE+ D V+N + + LP
Sbjct: 307 NTILERIEKRSLETGKEISKDIVDNFIKSMCLP 339
>gi|195426854|ref|XP_002061506.1| GK20678 [Drosophila willistoni]
gi|194157591|gb|EDW72492.1| GK20678 [Drosophila willistoni]
Length = 5143
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F ++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTAGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L A
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDA 1179
>gi|242023540|ref|XP_002432190.1| ATP-dependent RNA helicase Ddx1, putative [Pediculus humanus
corporis]
gi|212517587|gb|EEB19452.1| ATP-dependent RNA helicase Ddx1, putative [Pediculus humanus
corporis]
Length = 741
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 75/156 (48%), Gaps = 32/156 (20%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G G+Y + E T D+ +CRVG + G + LG +
Sbjct: 120 WHGCRATKGVKGKGQYYY------------EATVTDEG-LCRVGWATGHSSL-DLGTDKY 165
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F N+GE FG+ D I C ++L+ I F+KNGK LG A +
Sbjct: 166 GFGFGGTGKKSNSRQFDNYGEPFGMHDVIGCYLNLDD---MEIKFSKNGKDLGVAFRVP- 221
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
G + AV FP ++LKN + F
Sbjct: 222 -----GNLKDAV--------FFPAVVLKNAEMSFNF 244
>gi|198459897|ref|XP_001361539.2| GA10593 [Drosophila pseudoobscura pseudoobscura]
gi|198136844|gb|EAL26117.2| GA10593 [Drosophila pseudoobscura pseudoobscura]
Length = 5131
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F ++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTAGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
H G+ +FG ++ GD I C ID++ + TI F+ NG+ L A
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ---TISFSLNGELLMDA 1179
>gi|389568467|gb|AFK84957.1| ryanodine receptor [Bemisia tabaci]
Length = 5142
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 9 ELPDGDKPESVVKKAKVDDPVS----DSSASGPRSQKQR-VVLNPADCDLDFDIEDNGLK 63
E PD + +V KVDD + D+++ R+ +L+P D + + L
Sbjct: 1030 EDPDMLRSPHLVPYPKVDDAIKKANRDTASETVRTLLVYGYMLDPPTGDPN----EAALL 1085
Query: 64 SSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD 123
+ A+ N ++ GK+ F ++++T P+ RVG +R D
Sbjct: 1086 AEANRLRQMAFRTYRVEKNYAVSSGKWYFEFEVLTTGPM-------------RVGWARVD 1132
Query: 124 -DPVGKLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAK 181
P +LG E S+ F G H G+ FG ++ VGD + C +DL +TI F+
Sbjct: 1133 CSPGHQLGSDENSWAFDGFNSVKIHMGSTELFGHQYKVGDIVGCFLDLCD---STISFSL 1189
Query: 182 NGKWLGTA 189
NG+ L A
Sbjct: 1190 NGEPLMDA 1197
>gi|385843220|gb|AFI80904.1| ryanodine receptor [Cnaphalocrocis medinalis]
Length = 5087
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 9 ELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGL--KSSG 66
E PD + +V KVDD + ++ + +++ + D + L ++S
Sbjct: 1014 EDPDMHRSPHLVPYPKVDDAIKKANRDTASETVRTLLVYGYNLDPPTGEQHEALLAEASK 1073
Query: 67 LHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DP 125
L Q F A N ++ GK+ F +I++ P+ RVG + D P
Sbjct: 1074 LKQADFRT--YRAEKNYAVSSGKWYFEFEILTAGPM-------------RVGWAHADMAP 1118
Query: 126 VGKLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGK 184
LG+ E S+ F G + + G+ +FG+++ VGD + +DL K TI F+ NG+
Sbjct: 1119 GMMLGQDENSWAFDGYNEEKVYSGSTESFGKQWAVGDVVGVFLDLIDK---TISFSLNGE 1175
Query: 185 WLGTA 189
L A
Sbjct: 1176 LLMDA 1180
>gi|449473781|ref|XP_002190854.2| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Taeniopygia guttata]
Length = 1327
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 157 CRFNQEEG------VGDTPDSYAYDGNRVRKWNVTTTNYGKSWAAGDIVSCLIDLDE--- 207
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
TI F NG LGTA FD + G G+ A FP I L V F
Sbjct: 208 GTIAFCLNGISLGTA--FDNITRGAGM------------AYFPAISLSFKESVAFNFGSR 253
Query: 234 QGLIPVEGYK 243
PVEGY+
Sbjct: 254 PLRYPVEGYR 263
>gi|74205090|dbj|BAE21002.1| unnamed protein product [Mus musculus]
Length = 740
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 36/207 (17%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G R G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRGTRGLLKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + + + GGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASLDQGTDKFGFGF-GGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVV 225
+D++ + F+KNGK LG A + A +K + A+FP +LKN
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLAFEIPA----------HIKNQ----ALFPACVLKNAE 237
Query: 226 VVMQFSVEQ-GLIPVEGYKSWVSALDD 251
+ F E+ P +G+ + A D+
Sbjct: 238 LKFNFGEEEFKFPPKDGFVALSKAPDN 264
>gi|351704877|gb|EHB07796.1| ATP-dependent RNA helicase DDX1 [Heterocephalus glaber]
Length = 734
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RA G+ GK+ + + Q +CRVG S + LG +
Sbjct: 113 WHGCRATKGLVKGKHYY-------------EVSCHDQGLCRVGWSTMQASL-DLGTDKFG 158
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FGFGGTGK SH F N+GE+F + DTI C +D++ + F+KNGK LG A +
Sbjct: 159 FGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK---GHVKFSKNGKDLGLAFE---- 211
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
+ A+FP +LKN + F E P
Sbjct: 212 ----------IPPHMKNQALFPACVLKNAELKFNFGEEDFKFP 244
>gi|300796384|ref|NP_001179993.1| E3 ubiquitin-protein ligase RNF123 [Bos taurus]
gi|296474907|tpg|DAA17022.1| TPA: ring finger protein 123-like [Bos taurus]
Length = 1313
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 157 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDE--- 207
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F+ NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 208 GTLSFSLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 253
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 254 PLRYPVAGYR 263
>gi|301770359|ref|XP_002920585.1| PREDICTED: e3 ubiquitin-protein ligase RNF123-like [Ailuropoda
melanoleuca]
Length = 1316
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F+ NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFSLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|307197748|gb|EFN78897.1| Ryanodine receptor 44F [Harpegnathos saltator]
Length = 5080
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 62 LKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSR 121
L++S L Q F + ++ GK+ F ++++ P+ RVG ++
Sbjct: 1046 LEASRLRQLSFRT--YRVEKHYAVSSGKWYFEFEVLTAGPM-------------RVGWAK 1090
Query: 122 GD-DPVGKLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGF 179
D P LG E ++ F G H G +FG K+ VGD + C ID+ + TI F
Sbjct: 1091 ADCMPGSMLGSDESTWAFDGYNVTKVHAGTHESFGHKYQVGDIVGCFIDVADR---TISF 1147
Query: 180 AKNGKWLGTA 189
+ NG+ L A
Sbjct: 1148 SLNGELLMDA 1157
>gi|395516239|ref|XP_003762299.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Sarcophilus
harrisii]
Length = 1307
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 157 CRFNQEEG------VGDTPDSYAYDGNRVRKWNVTTTNYGKSWAAGDIVSCLIDLDE--- 207
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
TI F NG LGTA FD + G G+ A FP I L V F
Sbjct: 208 GTIAFCLNGVSLGTA--FDNITRGSGM------------AYFPAISLSFKESVAFNFGSR 253
Query: 234 QGLIPVEGYK 243
P+EGY+
Sbjct: 254 PLRYPIEGYR 263
>gi|195348735|ref|XP_002040903.1| GM22435 [Drosophila sechellia]
gi|194122413|gb|EDW44456.1| GM22435 [Drosophila sechellia]
Length = 727
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 74/157 (47%), Gaps = 34/157 (21%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G GK+ F E T D+ +CRVG S + LG
Sbjct: 117 WHGCRATTGVRGKGKFYF------------EATVTDEG-LCRVGWSTQQANL-DLGTCRM 162
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+ + + F KNG+ LG A
Sbjct: 163 GFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLQRQ---EVSFTKNGQNLGVA----- 214
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFS 231
+ D+ KE +P ++LKN MQF+
Sbjct: 215 ----FRLPDNLAKE-----TFYPAVVLKN--AEMQFN 240
>gi|380026505|ref|XP_003696991.1| PREDICTED: LOW QUALITY PROTEIN: ryanodine receptor 44F-like [Apis
florea]
Length = 5026
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 62 LKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSR 121
L++S L Q F + ++ GK+ F ++++ P+ RVG ++
Sbjct: 990 LEASRLRQLSFRT--YRVEKHYAVSNGKWYFEFEVLTAGPM-------------RVGWAK 1034
Query: 122 GD-DPVGKLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGF 179
D P LG E ++ F G H G +FG K+ VGD + C ID+ + TI F
Sbjct: 1035 ADCMPGSMLGSDENTWAFDGYNVTKVHAGTHESFGHKYQVGDIVGCFIDVADR---TISF 1091
Query: 180 AKNGKWLGTA 189
+ NG+ L A
Sbjct: 1092 SLNGELLMDA 1101
>gi|328789627|ref|XP_392217.4| PREDICTED: ryanodine receptor 44F [Apis mellifera]
Length = 5082
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 62 LKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSR 121
L++S L Q F + ++ GK+ F ++++ P+ RVG ++
Sbjct: 1046 LEASRLRQLSFRT--YRVEKHYAVSNGKWYFEFEVLTAGPM-------------RVGWAK 1090
Query: 122 GD-DPVGKLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGF 179
D P LG E ++ F G H G +FG K+ VGD + C ID+ + TI F
Sbjct: 1091 ADCMPGSMLGSDENTWAFDGYNVTKVHAGTHESFGHKYQVGDIVGCFIDVADR---TISF 1147
Query: 180 AKNGKWLGTA 189
+ NG+ L A
Sbjct: 1148 SLNGELLMDA 1157
>gi|24668515|ref|NP_524212.2| Dead-box-1 [Drosophila melanogaster]
gi|25090065|sp|Q9VNV3.1|DDX1_DROME RecName: Full=ATP-dependent RNA helicase Ddx1; Short=DEAD box
protein 1
gi|7296530|gb|AAF51814.1| Dead-box-1 [Drosophila melanogaster]
gi|21429192|gb|AAM50315.1| SD05527p [Drosophila melanogaster]
gi|220947000|gb|ACL86043.1| Ddx1-PA [synthetic construct]
Length = 727
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 75/157 (47%), Gaps = 34/157 (21%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G GK+ F E T D+ +CRVG S + LG
Sbjct: 117 WHGCRATTGVRGKGKFYF------------EATVTDEG-LCRVGWSTQQANL-DLGTCRM 162
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+++ + F KNG+ LG A
Sbjct: 163 GFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLKNQ---EVSFTKNGQNLGVA----- 214
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFS 231
+ D+ KE +P ++LKN MQF+
Sbjct: 215 ----FRLPDNLAKE-----TFYPAVVLKN--AEMQFN 240
>gi|417404289|gb|JAA48905.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 740
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
W G RA G GK+ + + Q +CRVG S + LG +
Sbjct: 119 WHGCRATKGPTKGKHYY-------------EVSCHDQGLCRVGWSSMQASL-DLGTDKFG 164
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
FGFGGTGK SH F N+GE+F + DTI C +D++ + F+KNGK LG A +
Sbjct: 165 FGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK---GHVKFSKNGKDLGLAFE---- 217
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIP 238
+ +K + A+FP +LKN + F E+ P
Sbjct: 218 ------IPPHLKNQ----ALFPACVLKNAELKFNFGEEEFKFP 250
>gi|194876157|ref|XP_001973723.1| GG16247 [Drosophila erecta]
gi|190655506|gb|EDV52749.1| GG16247 [Drosophila erecta]
Length = 727
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 75/157 (47%), Gaps = 34/157 (21%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G GK+ F E T D+ +CRVG S + LG
Sbjct: 117 WHGCRATSGVRGKGKFYF------------EATVTDEG-LCRVGWSTQQANL-DLGTCRM 162
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+ + + F+KNG+ LG A
Sbjct: 163 GFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLQRQE---VSFSKNGQNLGVA----- 214
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFS 231
+ D+ KE +P ++LKN MQF+
Sbjct: 215 ----FRLPDNLAKE-----TFYPAVVLKN--AEMQFN 240
>gi|194752363|ref|XP_001958492.1| GF10949 [Drosophila ananassae]
gi|190625774|gb|EDV41298.1| GF10949 [Drosophila ananassae]
Length = 729
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 72/157 (45%), Gaps = 34/157 (21%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G G++ F E T D+ +CRVG S + LG
Sbjct: 119 WHGCRATTGVQGKGRFYF------------EATVTDEG-LCRVGWSTQQANL-DLGTCRF 164
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+ + F KNG+ LG A +
Sbjct: 165 GFGFGGTGKKSNNRQFDDYGESFGKADVIGCLLDLQR---LEVSFTKNGQSLGVAFR--- 218
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFS 231
+ E + +P ++LKN MQF+
Sbjct: 219 -----------LPENLAKETFYPAVVLKN--AEMQFN 242
>gi|426249938|ref|XP_004018703.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF123
[Ovis aries]
Length = 1309
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDE--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F+ NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFSLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|410951189|ref|XP_003982281.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Felis catus]
Length = 1314
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|384948720|gb|AFI37965.1| E3 ubiquitin-protein ligase RNF123 [Macaca mulatta]
Length = 1311
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|383851977|ref|XP_003701507.1| PREDICTED: ryanodine receptor 44F-like [Megachile rotundata]
Length = 5084
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 20/130 (15%)
Query: 62 LKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSR 121
L++S L Q F + ++ GK+ F ++++ P+ RVG ++
Sbjct: 1046 LEASRLRQLSFRT--YRVEKHYAVSSGKWYFEFEVLTAGPM-------------RVGWAK 1090
Query: 122 GD-DPVGKLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGF 179
D P LG E ++ F G H G+ +FG ++ VGD + C ID+ + TI F
Sbjct: 1091 ADCMPGSMLGSDESTWAFDGYNVTKVHAGSHESFGHRYQVGDIVGCFIDVADR---TISF 1147
Query: 180 AKNGKWLGTA 189
+ NG+ L A
Sbjct: 1148 SLNGELLMDA 1157
>gi|378747458|gb|AFC36359.1| ryanodien receptor [Spodoptera exigua]
Length = 5118
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 18/183 (9%)
Query: 9 ELPDGDKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLH 68
E PD + +V KVDD + ++ + +++ + D + L
Sbjct: 1014 EDPDMHRSPHLVPYPKVDDAIKKANRDTASETVRTLLVYGYNLDPPTGEQHEALLLEASK 1073
Query: 69 QEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVG 127
Q+ + A N + GK+ F +I++ P+ RVG + D P
Sbjct: 1074 QKQAEFRTYRAEKNYAVGPGKWYFEFEILTAGPM-------------RVGWAHADMAPGM 1120
Query: 128 KLGETEQSFGFGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL 186
LG+ E S+ F G + + G+ +FG+++ VGD + +DL K TI F+ NG+ L
Sbjct: 1121 MLGQDENSWAFDGYNEEKVYSGSTESFGKQWSVGDVVGVFLDLIDK---TISFSLNGELL 1177
Query: 187 GTA 189
A
Sbjct: 1178 MDA 1180
>gi|297671319|ref|XP_002813788.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF123
[Pongo abelii]
Length = 1310
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|149040845|gb|EDL94802.1| rCG20317, isoform CRA_c [Rattus norvegicus]
Length = 139
Score = 46.6 bits (109), Expect = 0.022, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 70 EGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKL 129
E FA+ W+G RA+ G++ GK CF K+ PV T H R+G S + L
Sbjct: 2 ESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGM-LL 60
Query: 130 GETEQSFGFGGTG 142
GE E S+G+ G
Sbjct: 61 GEEEFSYGYSLKG 73
>gi|241093405|ref|XP_002409383.1| E1b-55kD-associated protein, putative [Ixodes scapularis]
gi|215492719|gb|EEC02360.1| E1b-55kD-associated protein, putative [Ixodes scapularis]
Length = 233
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 363 LRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+R F FR+ AVV+ P E+ R KR KE GK+VP AV M AN+ LP
Sbjct: 1 MRPFEGFRRRAVVIVPTDEEFLRRCAKREKEEGKDVPDIAVLEMKANFSLP 51
>gi|410220260|gb|JAA07349.1| ring finger protein 123 [Pan troglodytes]
gi|410259300|gb|JAA17616.1| ring finger protein 123 [Pan troglodytes]
Length = 1311
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 153 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 203
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 204 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 249
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 250 PLRYPVAGYR 259
>gi|355559631|gb|EHH16359.1| hypothetical protein EGK_11630 [Macaca mulatta]
gi|383420653|gb|AFH33540.1| E3 ubiquitin-protein ligase RNF123 [Macaca mulatta]
gi|383420655|gb|AFH33541.1| E3 ubiquitin-protein ligase RNF123 [Macaca mulatta]
Length = 1311
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|242007555|ref|XP_002424605.1| F-box/SPRY-domain protein, putative [Pediculus humanus corporis]
gi|212508048|gb|EEB11867.1| F-box/SPRY-domain protein, putative [Pediculus humanus corporis]
Length = 254
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 34/187 (18%)
Query: 20 VKKAKVDDPVSDSSASGPRSQ-KQRVVL---NPADCDLDFDIEDNGLKSSGLHQEGFAYC 75
V+K D SD +S P + K R NPADC + I+ NG LH+ A
Sbjct: 52 VRKITDDTLKSDLLSSIPSYKAKLRAFFHAWNPADCSRNVYIKTNGFT---LHRNPVAQS 108
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDP------VGKL 129
AR+ VG G++ + +I+ P+ V +G + + P + L
Sbjct: 109 TDAARSKVGFKRGRHAW--EIIWEGPLGT---------VAVIGITTSEAPLQCHGYIALL 157
Query: 130 GETEQSFGFGGT-GKFSHGGN------FLNFGEKFGVGDTIICAIDLESKPLATIGFAKN 182
G +QS+G+ H G+ LN K+ VG+ I +D E T+ F KN
Sbjct: 158 GSDDQSWGWNLVDNHLLHNGDSQGSYPLLNNAPKYQVGEKIRVILDCEDN---TLSFEKN 214
Query: 183 GKWLGTA 189
++LG A
Sbjct: 215 YEFLGVA 221
>gi|109039617|ref|XP_001106313.1| PREDICTED: e3 ubiquitin-protein ligase RNF123 isoform 2 [Macaca
mulatta]
Length = 1311
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|410339927|gb|JAA38910.1| ring finger protein 123 [Pan troglodytes]
Length = 1311
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 153 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 203
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 204 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 249
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 250 PLRYPVAGYR 259
>gi|402860075|ref|XP_003894461.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Papio anubis]
Length = 1314
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|359322272|ref|XP_541883.4| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Canis lupus
familiaris]
Length = 1314
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|355764093|gb|EHH62248.1| hypothetical protein EGM_20499 [Macaca fascicularis]
Length = 1311
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|156401543|ref|XP_001639350.1| predicted protein [Nematostella vectensis]
gi|156226478|gb|EDO47287.1| predicted protein [Nematostella vectensis]
Length = 867
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 94/213 (44%), Gaps = 32/213 (15%)
Query: 33 SASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCF 92
S SGP + K +NP D I+ G L Q Y W G R+ +G+ Y +
Sbjct: 82 SVSGPSTFK----MNPFDRGDTLTIDKEGY----LCQSRDFYKWQGCRSTLGVK-KVYLY 132
Query: 93 GCKIVS----TQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGG 148
++S + E T D+ +CRVG S + LG E+ FGFGGTGK S+
Sbjct: 133 SPNVLSLANNSGKYYYEATVTDEG-LCRVGWSTAHATL-DLGTDEEGFGFGGTGKKSYNR 190
Query: 149 NFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKE 208
F +GE FG+ DTI C I+L++ T+ ++KNG G K FD LG
Sbjct: 191 QFDTYGEPFGINDTIGCYINLDN---GTVKYSKNGVDFG--KAFDIPQALLG-------- 237
Query: 209 RQCESAVFPHILLKNVVVVMQFSVEQGLIPVEG 241
F ++LKN + F P +G
Sbjct: 238 ----KTFFAAVVLKNAEMKFNFGDSSFQCPPKG 266
>gi|117644948|emb|CAL37940.1| hypothetical protein [synthetic construct]
Length = 1314
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|426340571|ref|XP_004034202.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Gorilla gorilla
gorilla]
Length = 1314
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|193788377|dbj|BAG53271.1| unnamed protein product [Homo sapiens]
Length = 1314
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|397496137|ref|XP_003818899.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Pan paniscus]
Length = 1237
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 79 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 129
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 130 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 175
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 176 PLRYPVAGYR 185
>gi|332215984|ref|XP_003257121.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Nomascus leucogenys]
Length = 1312
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 155 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 205
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 206 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 251
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 252 PLRYPVAGYR 261
>gi|37588869|ref|NP_071347.2| E3 ubiquitin-protein ligase RNF123 [Homo sapiens]
gi|74748090|sp|Q5XPI4.1|RN123_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF123; AltName:
Full=Kip1 ubiquitination-promoting complex protein 1;
AltName: Full=RING finger protein 123
gi|53766621|gb|AAU93470.1| ubiquitin ligase [Homo sapiens]
Length = 1314
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|120660114|gb|AAI30633.1| Ring finger protein 123 [Homo sapiens]
Length = 1314
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|390475050|ref|XP_002758400.2| PREDICTED: E3 ubiquitin-protein ligase RNF123 isoform 2 [Callithrix
jacchus]
Length = 1320
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|168278467|dbj|BAG11113.1| E3 ubiquitin-protein ligase RNF123 [synthetic construct]
Length = 1314
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|344275802|ref|XP_003409700.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Loxodonta africana]
Length = 1314
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|410493154|ref|YP_006908220.1| poly A polymerase [Campylobacter phage CP30A]
gi|404057213|gb|AFR52470.1| poly A polymerase [Campylobacter phage CP30A]
Length = 346
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHN--YSERFQCL 325
+ M++G+P GK+T ++ ++ ++++ K L ++ +S+ Q
Sbjct: 189 ITMLIGVPGVGKSTLCNQY-------ENVVSRDDVLMSYGKTKFNLDTYSEIWSKLSQDD 241
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLR---LFVNFRKIAVVVFPKPED 382
+ IF L+R + ++ +ID+TN +RK L L N+ K+++V+
Sbjct: 242 QKEIDNIFKFKLNRLLQQGKDIVIDKTNTSMKSRKSLLNSSSLIKNYNKVSIVMLCPYNT 301
Query: 383 LKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ R KR E GKE+ D V+N + + LP
Sbjct: 302 ILERIEKRSLETGKEISKDIVDNFIKSMCLP 332
>gi|311268911|ref|XP_003132264.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Sus scrofa]
Length = 1314
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|432945936|ref|XP_004083760.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Oryzias latipes]
Length = 740
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 71/146 (48%), Gaps = 25/146 (17%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + W G R+ G+ GKY +
Sbjct: 93 MNPYDRSPAFAIGPDGLCCQSREFKE------WHGCRSTKGVTKGKYYY----------- 135
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
E T DQ +CRVG S + LG + FGFGGTGK S+ F ++GE+F + DTI
Sbjct: 136 -EVTCSDQG-LCRVGWSTTQAAL-DLGTDKYGFGFGGTGKKSNNKQFDSYGEEFTMHDTI 192
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTA 189
C +DLE I ++KNG LG A
Sbjct: 193 GCYLDLEKN---QISYSKNGNDLGLA 215
>gi|338714688|ref|XP_001497484.3| PREDICTED: e3 ubiquitin-protein ligase RNF123 [Equus caballus]
Length = 1314
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVTGYR 262
>gi|410036981|ref|XP_001164974.3| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Pan troglodytes]
Length = 1317
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 153 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 203
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 204 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 249
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 250 PLRYPVAGYR 259
>gi|395856453|ref|XP_003800643.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Otolemur garnettii]
Length = 1312
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 155 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 205
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 206 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 251
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 252 PLRYPVAGYR 261
>gi|427780327|gb|JAA55615.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 305
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 363 LRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+R F F++ AVV+ P E+ R KR KE GK+VP AV M AN+V+P
Sbjct: 1 MRPFEGFKRRAVVIVPTDEEFLRRCQKREKEEGKDVPDIAVLEMKANFVMP 51
>gi|403291348|ref|XP_003936758.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Saimiri boliviensis
boliviensis]
Length = 1560
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|254509606|ref|ZP_05121673.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhodobacteraceae
bacterium KLH11]
gi|221533317|gb|EEE36305.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhodobacteraceae
bacterium KLH11]
Length = 347
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 23/150 (15%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
C V +M GLP +GK TW K +HP ++ ++I +++ V N + Q
Sbjct: 207 CTVTVMSGLPGTGKDTWISKHRPEHP-----VVSLDVIRDELSVSA---TDNQGQVIQAA 258
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFP-KPEDL 383
RA R R+F+ + TNV + R R LRL ++ +I +V P+ L
Sbjct: 259 HERAREHL--------RAGRDFVWNATNVTRQNRSRVLRLLRDYGARIEIVYLEIDPDQL 310
Query: 384 KIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ ++ R VP DAV L+ + P
Sbjct: 311 RRQNWDR----PDAVP-DAVITHLSKKLEP 335
>gi|340710638|ref|XP_003393894.1| PREDICTED: ryanodine receptor 44F-like [Bombus terrestris]
Length = 5108
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
+ ++ GK+ F ++++ P+ RVG ++ D P LG E ++ F G
Sbjct: 1084 HYAVSSGKWYFEFEVLTAGPM-------------RVGWAKADCSPGNMLGSDESTWAFDG 1130
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
H G +FG ++ VGD + C ID+ + TI F+ NG+ L A
Sbjct: 1131 YNVTKVHAGIHESFGHRYQVGDVVGCFIDVADR---TISFSLNGELLMDA 1177
>gi|157138486|ref|XP_001657320.1| ryanodine receptor 3, brain [Aedes aegypti]
gi|108880639|gb|EAT44864.1| AAEL003837-PA [Aedes aegypti]
Length = 5118
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 79 ARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFG 137
A N + GK+ F ++++ P+ RVG +R D +P LG + S+
Sbjct: 1083 AEKNYAVTSGKWYFEFEVLTAGPM-------------RVGWARADCNPGTMLGSDDSSWA 1129
Query: 138 FGG-TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
F G + H +FG ++ VGD I C I++ K T F+ NG+ L A
Sbjct: 1130 FDGYNARKLHLHTVEDFGRRYQVGDIIGCLINVTDK---TTSFSLNGELLMDA 1179
>gi|1098902|gb|AAC47309.1| DEAD-box protein [Drosophila melanogaster]
Length = 725
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 72/157 (45%), Gaps = 34/157 (21%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G GK+ F + + +CRVG S + LG
Sbjct: 117 WHGCRATTGVRGKGKFYFEATVTD-------------EGLCRVGWSTQQANL-DLGTCRM 162
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+++ + F KNG+ LG A
Sbjct: 163 GFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLKNQ---EVSFTKNGQNLGVA----- 214
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFS 231
D+ KE +P ++LKN MQF+
Sbjct: 215 ----FRSPDNLAKE-----TFYPAVVLKN--AEMQFN 240
>gi|358253490|dbj|GAA53233.1| band 4.1-like protein 3 [Clonorchis sinensis]
Length = 1405
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 57/138 (41%), Gaps = 30/138 (21%)
Query: 29 VSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING- 87
VSD S R R +NP D DI +G K+ Q +A+ W G R+N GI G
Sbjct: 734 VSDDSEVPNRITGWR--MNPYDASAALDISPDGSKA----QAHWAHGWQGCRSNQGIRGP 787
Query: 88 GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGG------- 140
G++ F E TP + +CR+G S D + LG FG+G
Sbjct: 788 GRFYF------------EATPLEDTGLCRIGWSTEDASL-NLGTDRFGFGYGADNDGFGL 834
Query: 141 ---TGKFSHGGNFLNFGE 155
GK H N+GE
Sbjct: 835 NGQQGKRMHCDEIENYGE 852
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 32/150 (21%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGING-GKYCFGCKIVSTQPVDM 104
++PAD I+ +GL + G W G RAN G+ G Y F + V +
Sbjct: 555 ISPADRTPGLGIDPHGLDVAAQRGAG----WQGCRANKGVKAPGAYYF-------EAVCL 603
Query: 105 EDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFG----------GTGKFSHGGNFLNFG 154
ED + RVG S + + +LG FGFG GTG+ H ++G
Sbjct: 604 EDG------LVRVGWSTNEASL-ELGTDNCGFGFGADAVGASGANGTGRAMHRNTGHDYG 656
Query: 155 EKFGVGDTIICAIDLESKPLATIGFAKNGK 184
GD I C +DL ++ ++ NG+
Sbjct: 657 VSVKQGDVIGCWLDLNK---GSVAWSCNGE 683
>gi|332672468|ref|YP_004421712.1| putative poly A polymerase [Campylobacter phage NCTC12673]
gi|327493645|gb|AEA86504.1| putative poly A polymerase [Campylobacter phage NCTC12673]
Length = 346
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL-- 325
+ M++G+P GK+T ++ ++ ++++ K L + YSE + L
Sbjct: 189 ITMLIGVPGVGKSTLCNQY-------ENVVSRDDVLMSYGKTKFNL--NTYSEIWSKLSQ 239
Query: 326 --MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLR---LFVNFRKIAVVVFPKP 380
+ IF L+R + ++ +ID+TN +RK L L N+ K+A+V+
Sbjct: 240 DDQKEIDNIFKFKLNRLLQQGKDIVIDKTNTSMKSRKSLLNSSSLIKNYNKVAIVMLCPY 299
Query: 381 EDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+ R KR E GKE+ + V+N + + LP
Sbjct: 300 NTILERIEKRSLETGKEISKNIVDNFIKSMCLP 332
>gi|350396439|ref|XP_003484552.1| PREDICTED: ryanodine receptor 44F-like [Bombus impatiens]
Length = 5108
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
+ ++ GK+ F ++++ P+ RVG ++ D P LG E ++ F G
Sbjct: 1084 HYAVSSGKWYFEFEVLTAGPM-------------RVGWAKADCSPGNMLGSDESTWAFDG 1130
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
H G +FG ++ VGD + C ID+ + TI F+ NG+ L A
Sbjct: 1131 YNVTKVHAGIHESFGHRYQVGDVVGCFIDVADR---TISFSLNGELLMDA 1177
>gi|126305553|ref|XP_001363606.1| PREDICTED: ATP-dependent RNA helicase DDX1 [Monodelphis domestica]
Length = 740
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 69/149 (46%), Gaps = 21/149 (14%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL Q W G R+ G+ GKY +
Sbjct: 93 MNPYDRGSAFAIGSDGLCC----QSREVKEWHGCRSTKGVMKGKYYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F +GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSASQASL-DLGTDKFGFGFGGTGKKSHNKQFDGYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTAKQFDA 194
+D++ + F+KNGK LG A + A
Sbjct: 195 YLDIDK---GQVKFSKNGKDLGLAFEIPA 220
>gi|427798249|gb|JAA64576.1| Putative cuticular protein, partial [Rhipicephalus pulchellus]
Length = 301
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 363 LRLFVNFRKIAVVVFPKPEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
+R F F++ AVV+ P E+ R KR KE GK+VP AV M AN+V+P
Sbjct: 1 MRPFEGFKRRAVVIVPTDEEFLRRCQKREKEEGKDVPDIAVLEMKANFVMP 51
>gi|301614091|ref|XP_002936521.1| PREDICTED: e3 ubiquitin-protein ligase RNF123 [Xenopus (Silurana)
tropicalis]
Length = 1305
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 28/169 (16%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
+S RA + GK+ + I S + + CR G +G+T S
Sbjct: 121 FSSIRATTCVYKGKWLYEVLISSQGLMQIGWCTLS----CRFNQEEG------VGDTPDS 170
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
+ + G N+G+ + GD + C IDL+ TI F NG LGTA F
Sbjct: 171 YAYDGNRVRKWNVTTTNYGKSWAAGDIVSCLIDLDE---GTISFCLNGVSLGTA--FSDI 225
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVEQGLIPVEGYK 243
S G G+ A FP I L V F PVEGY+
Sbjct: 226 SRGSGM------------AYFPAISLSFKESVAFNFGSRPLRYPVEGYR 262
>gi|326437016|gb|EGD82586.1| hypothetical protein PTSG_03239 [Salpingoeca sp. ATCC 50818]
Length = 1179
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 80 RANVGINGGKYCFGCKIVST-QPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGF 138
R++V + GK+ F IV+T + + + P CR S G +G++ S+ +
Sbjct: 86 RSDVAVCAGKWMFEVVIVTTPETIQLGWCSP----ACRFTASDG------VGDSRDSYAY 135
Query: 139 GGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
G + +GE + GD I C IDL+ TI + +NG+ LG A
Sbjct: 136 DGMRRRKWNVGSRKYGEHWVQGDVIGCCIDLDQ---GTISYYRNGRDLGVA 183
>gi|8895543|gb|AAF81015.1| DEAD box protein 1 [Rattus norvegicus]
Length = 166
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 18/109 (16%)
Query: 143 KFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVV 202
K SH F N+GE+F + DTI C +D++ + F+KNGK LG A + +
Sbjct: 1 KKSHNKQFDNYGEEFTMHDTIGCYLDIDK---GHVKFSKNGKDLGLAFE----------I 47
Query: 203 DSAVKERQCESAVFPHILLKNVVVVMQFSVEQ-GLIPVEGYKSWVSALD 250
+ +K + A+FP +LKN + F E+ P +G+ + A D
Sbjct: 48 PAHIKNQ----ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPD 92
>gi|348540565|ref|XP_003457758.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Oreochromis
niloticus]
Length = 1163
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 81/230 (35%), Gaps = 33/230 (14%)
Query: 14 DKPESVVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFA 73
D P + K D P D A R Q VVL+ D+ L H
Sbjct: 63 DLPAHLEKLLSEDTPTEDGQAVDGRLGPQPVVLDHTSGFEGLLFVDDDLLGVIGHSN--- 119
Query: 74 YCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETE 133
+S RA + GK+ + I S + + CR G +G+T
Sbjct: 120 --FSSIRATTCVYKGKWAYEVLISSQGLMQIGWCTLS----CRFNQEEG------VGDTP 167
Query: 134 QSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFD 193
S+ + G N+G+ + GD + C IDL+ TI F NG+ LGTA F
Sbjct: 168 DSYAYDGNRVRKWNVTTTNYGKSWAAGDIVSCLIDLDE---GTITFCLNGQSLGTA--FT 222
Query: 194 AGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVEQGLIPVEGY 242
G G+ A FP I L V F PV+GY
Sbjct: 223 NIKMGPGI------------AYFPAISLSFKESVAFNFGSRPLRYPVDGY 260
>gi|170060755|ref|XP_001865941.1| ATP-dependent RNA helicase Ddx1 [Culex quinquefasciatus]
gi|167879122|gb|EDS42505.1| ATP-dependent RNA helicase Ddx1 [Culex quinquefasciatus]
Length = 690
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 72/183 (39%), Gaps = 44/183 (24%)
Query: 76 WSGARANVGING--GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETE 133
W G R G+ G GKY + E T D+ +GT R
Sbjct: 87 WHGCRGTTGVRGGKGKYYY------------EATVTDEDAALDLGTDR------------ 122
Query: 134 QSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFD 193
FGFGGTGK S+ F N+GE FG D I C +DL+ + F KNG LG A + D
Sbjct: 123 FGFGFGGTGKKSNCKQFDNYGEAFGKCDVIGCCLDLDR---GEVSFTKNGVSLGVAFRID 179
Query: 194 AGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLIPV-EGYKSWVSALDDG 252
G + FP ++LKN + F PV EG+ + D
Sbjct: 180 GNIKG--------------GSFFPAVVLKNAEMSFNFGETDFKYPVPEGFVAVCKVAHDN 225
Query: 253 NSV 255
+V
Sbjct: 226 LAV 228
>gi|55824552|gb|AAV66396.1| adenovirus E1B 55-kDa protein-associated protein 5 [Macaca
fascicularis]
Length = 293
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 50 DCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCK 95
+CDL F + + L EGFAY WSGARA+ G+ G+ CF K
Sbjct: 1 NCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMK 46
>gi|329923687|ref|ZP_08279098.1| hypothetical protein HMPREF9412_5258 [Paenibacillus sp. HGF5]
gi|328941120|gb|EGG37421.1| hypothetical protein HMPREF9412_5258 [Paenibacillus sp. HGF5]
Length = 321
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMG 327
+ M+VG+P SGK+ +A++ K +R +L+ T+ I E++ +K+ Y
Sbjct: 4 IHMLVGIPGSGKSYYAKQLCKS---ERAVLVATDAIRERLFGSESKQKNTY--------- 51
Query: 328 RANAIFD---VLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLK 384
+FD + +A ++ RN + D TNV + R++ L+ F + R++ + P +
Sbjct: 52 ---LVFDEAFAEIEQALKSDRNVVFDATNVSRERRQKFLKRFGD-RRVECHICTTPYEAA 107
Query: 385 IRSVKRFK 392
+ VKR K
Sbjct: 108 LDRVKRRK 115
>gi|261406557|ref|YP_003242798.1| metal dependent phosphohydrolase [Paenibacillus sp. Y412MC10]
gi|261283020|gb|ACX64991.1| metal dependent phosphohydrolase [Paenibacillus sp. Y412MC10]
Length = 321
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 23/130 (17%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMG 327
+ M+VG+P SGK+ +A++ K +R +L+ T+ I E++ +K+ Y
Sbjct: 4 IHMLVGIPGSGKSYYAKQLCKS---ERAVLVATDAIRERLFGSESKQKNTY--------- 51
Query: 328 RANAIFD---VLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF--RKIAVVVFPKPED 382
+FD + A ++ RN + D TNV +R+R+L+ + R++ + P +
Sbjct: 52 ---MVFDEAFAEIEEALKSDRNVVFDATNV---SRERRLKFLKRYGDRRVECHICTTPYE 105
Query: 383 LKIRSVKRFK 392
+ + VKR K
Sbjct: 106 VALDRVKRRK 115
>gi|345307297|ref|XP_003428559.1| PREDICTED: ATP-dependent RNA helicase DDX1-like [Ornithorhynchus
anatinus]
Length = 700
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 40/200 (20%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVD 103
+NP D F I +GL +S + + W G R+ G+ GK+ +
Sbjct: 19 MNPYDRGSAFAIGSDGLCCQSREIKE------WHGCRSTKGVMKGKHYY----------- 61
Query: 104 MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTI 163
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI
Sbjct: 62 --EVSCHDQGLCRVGWSTLQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTI 118
Query: 164 ICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKN 223
C +D++ + F+KNGK LG A + V +F +LKN
Sbjct: 119 GCYLDVDK---GQVKFSKNGKDLGLAFE--------------VPPHMKNQGIFAACVLKN 161
Query: 224 VVVVMQFSVEQ-GLIPVEGY 242
+ F E+ P +GY
Sbjct: 162 AELKFNFGEEEFKFPPKDGY 181
>gi|393795188|ref|ZP_10378552.1| hypothetical protein CNitlB_02283 [Candidatus Nitrosoarchaeum
limnia BG20]
Length = 160
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQM-KVPGLLRKHNYSERFQCLMGRA 329
M+G+ SGKTTW + K+YI T+ ++EQ+ ++ G+ +Y+E F + +
Sbjct: 1 MIGVSGSGKTTWV------NSHKQYIACSTDSVIEQLAELMGI----SYTEAFDYIQKKK 50
Query: 330 NAIFDVLLSRASR-------TPRNFIIDQTNVFKSARKRKLRLFVNFRK-------IAVV 375
FD + ++ ++F+ID+T++ + R + +F K + V
Sbjct: 51 K--FDYITTKFFEKIHDCILNDKDFVIDRTHLKRHIRISLINELRSFAKEHGKNLELVGV 108
Query: 376 VFPKPEDLKI-RSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFD 426
F P+ R KR K GK +P + + ++ D P DE FD
Sbjct: 109 SFELPKSTIFERLKKREKHSGKSIPKQVIQEQIDSF------DIPTLDEGFD 154
>gi|148689317|gb|EDL21264.1| ring finger protein 123, isoform CRA_b [Mus musculus]
Length = 1321
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL--KNVVVVMQFSV 232
T+ F NG LGTA F+ S GLG+ A FP I L K V S
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 233 EQGLIPVEGYK 243
G PV G++
Sbjct: 253 PFGTYPVAGFR 263
>gi|402890132|ref|XP_003908345.1| PREDICTED: ATP-dependent RNA helicase DDX1-like, partial [Papio
anubis]
Length = 255
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 21/144 (14%)
Query: 46 LNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDME 105
+NP D F I +GL + W G RA G+ GK+ +
Sbjct: 93 MNPYDRGSAFAIGSDGLCCQSREVKE----WHGCRATKGLMKGKHYY------------- 135
Query: 106 DTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIIC 165
+ Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194
Query: 166 AIDLESKPLATIGFAKNGKWLGTA 189
+D++ + F+KNGK LG A
Sbjct: 195 YLDIDK---GHVKFSKNGKDLGLA 215
>gi|148689314|gb|EDL21261.1| ring finger protein 123, isoform CRA_a [Mus musculus]
gi|148689315|gb|EDL21262.1| ring finger protein 123, isoform CRA_a [Mus musculus]
gi|148689316|gb|EDL21263.1| ring finger protein 123, isoform CRA_a [Mus musculus]
Length = 1315
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL--KNVVVVMQFSV 232
T+ F NG LGTA F+ S GLG+ A FP I L K V S
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 233 EQGLIPVEGYK 243
G PV G++
Sbjct: 253 PFGTYPVAGFR 263
>gi|157129336|ref|XP_001655375.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882110|gb|EAT46335.1| AAEL002488-PA [Aedes aegypti]
Length = 726
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 75/156 (48%), Gaps = 31/156 (19%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G GKY + E T D+ +CRVG S + LG +
Sbjct: 115 WHGCRATTGVRGKGKYYY------------EATVTDEG-LCRVGWSTEIANL-DLGTDKF 160
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D I C +DL+ + F KNG LG A + +
Sbjct: 161 GFGFGGTGKKSNCKQFDSYGEAFGKMDVIGCMLDLDR---GEVSFTKNGTSLGLAFKIN- 216
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
D+ ++ ES+ FP ++LKN + F
Sbjct: 217 --------DAKMR----ESSFFPAVVLKNAEMSFNF 240
>gi|440909009|gb|ELR58968.1| E3 ubiquitin-protein ligase RNF123 [Bos grunniens mutus]
Length = 1330
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 157 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDE--- 207
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
T+ F+ NG LGTA F+ S GLG+
Sbjct: 208 GTLSFSLNGVSLGTA--FENLSRGLGM 232
>gi|300797435|ref|NP_001178509.1| E3 ubiquitin-protein ligase RNF123 [Rattus norvegicus]
Length = 1312
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 154 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 204
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 205 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 250
Query: 234 QGLIPVEGYK 243
PV G++
Sbjct: 251 PLRYPVAGFR 260
>gi|302425022|sp|D3ZXK7.1|RN123_RAT RecName: Full=E3 ubiquitin-protein ligase RNF123; AltName:
Full=Kip1 ubiquitination-promoting complex protein 1;
AltName: Full=RING finger protein 123
Length = 1318
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 154 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 204
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 205 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 250
Query: 234 QGLIPVEGYK 243
PV G++
Sbjct: 251 PLRYPVAGFR 260
>gi|54027904|ref|NP_115932.1| E3 ubiquitin-protein ligase RNF123 [Mus musculus]
gi|81889924|sp|Q5XPI3.1|RN123_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF123; AltName:
Full=Kip1 ubiquitination-promoting complex protein 1;
AltName: Full=RING finger protein 123
gi|53766623|gb|AAU93471.1| ubiquitin ligase [Mus musculus]
Length = 1314
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV G++
Sbjct: 253 PLRYPVAGFR 262
>gi|407786374|ref|ZP_11133519.1| polyA polymerase-like protein [Celeribacter baekdonensis B30]
gi|407201095|gb|EKE71096.1| polyA polymerase-like protein [Celeribacter baekdonensis B30]
Length = 381
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
C V++M GLP GK TW K +HP ++ + I +++ G+ N + Q
Sbjct: 241 CTVIVMSGLPGVGKDTWIGKNCPEHP-----VVSLDTIRDEL---GVSASDNQGQVIQAA 292
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKI 385
RA R R+F+ + TNV + R R LRL ++ +V+ + ++
Sbjct: 293 HERAREHL--------RAGRDFVWNATNVTRQNRSRVLRLLRDYGACVEIVYLEENPDQL 344
Query: 386 RSVKRFKEMGKEVPADAVNNM 406
R R E VP + ++
Sbjct: 345 RHQNR--ERPDAVPEAVITHL 363
>gi|34784561|gb|AAH57082.1| Rnf123 protein [Mus musculus]
Length = 1320
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV G++
Sbjct: 253 PLRYPVAGFR 262
>gi|333494509|gb|AEF56747.1| hypothetical protein [Campylobacter phage vB_CcoM-IBB_35]
Length = 343
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 35/207 (16%)
Query: 222 KNVVVVMQFSVEQGL-----IPVEGYKSWVSALDDGNSVLGPTFCNMKDCEVMMMVGLPA 276
+++ ++ +FSV L +P E + A D N V P + ++VGLP
Sbjct: 143 RDLKLLSKFSVADALGRITEVPKELPDLNIEAYDRSNVVNEPV--------LEVLVGLPG 194
Query: 277 SGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHN---YSERFQCLMG----RA 329
SGK+T+ ++ D + + + IL + +K+N YS+ ++ L
Sbjct: 195 SGKSTYV--YMNDK-----VAISRDDILMRYG----FKKYNQVEYSDIWRNLTDSDQKEI 243
Query: 330 NAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKL---RLFVNFRKIAVVVFPKPEDLKIR 386
+++F+ RA + +N +ID+TN +R+R L N+ K AVV F P + +
Sbjct: 244 DSLFNDKFLRALQKNQNILIDKTNTSVKSRRRLFATSSLVRNYHKKAVV-FLTPYTMILN 302
Query: 387 SVKRFKEMGKEVPADAVNNMLANYVLP 413
+++ GK + V+ ML ++V+P
Sbjct: 303 RLEKRNSTGKVINKSVVDTMLKSFVMP 329
>gi|116284056|gb|AAH25530.1| Rnf123 protein [Mus musculus]
Length = 1239
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV G++
Sbjct: 253 PLRYPVAGFR 262
>gi|357622151|gb|EHJ73734.1| hypothetical protein KGM_07526 [Danaus plexippus]
Length = 5019
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 15/161 (9%)
Query: 19 VVKKAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSG 78
+V KVDD + ++ + +++ + D + L + Q+ +
Sbjct: 1097 LVPYPKVDDAIKKANRDTASETVRTLLVYGYNLDPPTGEQHEALLAEASKQKQVDFRTYR 1156
Query: 79 ARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFG 137
A N ++ GK+ F +I++ P+ RVG + D P LG+ + S+
Sbjct: 1157 AEKNYAVSSGKWYFEFEILTAGPM-------------RVGWAHADMAPGMMLGQDDNSWA 1203
Query: 138 FGGTGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATI 177
F G HGG FG++ VGD + C +D+ + ++ +
Sbjct: 1204 FDGYNCLKWHGGASDTFGQQLKVGDIVACFLDVTDQTISEL 1244
>gi|281338341|gb|EFB13925.1| hypothetical protein PANDA_009342 [Ailuropoda melanoleuca]
Length = 1296
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
T+ F+ NG LGTA F+ S GLG+
Sbjct: 207 GTLSFSLNGVSLGTA--FENLSRGLGM 231
>gi|119585412|gb|EAW65008.1| hCG20123, isoform CRA_d [Homo sapiens]
Length = 1310
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
T+ F NG LGTA F+ S GLG+
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM 231
>gi|119585411|gb|EAW65007.1| hCG20123, isoform CRA_c [Homo sapiens]
Length = 1310
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
T+ F NG LGTA F+ S GLG+
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM 231
>gi|119585409|gb|EAW65005.1| hCG20123, isoform CRA_b [Homo sapiens]
gi|119585410|gb|EAW65006.1| hCG20123, isoform CRA_b [Homo sapiens]
Length = 1326
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
T+ F NG LGTA F+ S GLG+
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM 231
>gi|354476361|ref|XP_003500393.1| PREDICTED: E3 ubiquitin-protein ligase RNF123 [Cricetulus griseus]
gi|344252827|gb|EGW08931.1| E3 ubiquitin-protein ligase RNF123 [Cricetulus griseus]
Length = 1314
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTYNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV G++
Sbjct: 253 PLRYPVSGFR 262
>gi|119585413|gb|EAW65009.1| hCG20123, isoform CRA_e [Homo sapiens]
Length = 1311
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
T+ F NG LGTA F+ S GLG+
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM 231
>gi|432859204|ref|XP_004069064.1| PREDICTED: E3 ubiquitin-protein ligase RNF123-like [Oryzias
latipes]
Length = 1323
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 64/168 (38%), Gaps = 28/168 (16%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
+S RA + GK+ + I S + + + CR G +G+T S
Sbjct: 120 FSSIRATTCVYKGKWAYEVLISSQGLMQIGWCTLN----CRFNQEEG------VGDTPDS 169
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
+ + G N+G+ + GD + C IDL+ TI F NG+ LGTA F
Sbjct: 170 YAYDGNRVRKWNVTTTNYGKSWAAGDIVNCLIDLDE---GTITFCLNGQSLGTA--FTNI 224
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVEQGLIPVEGY 242
G G+ A FP I L V F PVEGY
Sbjct: 225 KMGPGI------------AYFPAISLSFKESVAFNFGSRPLRYPVEGY 260
>gi|221114544|ref|XP_002159716.1| PREDICTED: uncharacterized protein LOC100202074, partial [Hydra
magnipapillata]
Length = 210
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 38 RSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGK 89
R + R+ L+ + +L IE+NG S + EGF Y W G RA+ G+ GK
Sbjct: 159 RKENPRITLDSYNSELHVQIEENGFVGSIMRGEGFEYMWGGVRASHGVIKGK 210
>gi|345486848|ref|XP_003425568.1| PREDICTED: ryanodine receptor 44F-like [Nasonia vitripennis]
Length = 5079
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
+ ++ GK+ F ++++ P+ RVG ++ D P LG E ++ F G
Sbjct: 1065 HYAVSSGKWYFEFEVLTAGPM-------------RVGWAKADCMPGSMLGSDENTWAFDG 1111
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
H G+ +FG++ VGD + C ID+ P TI F+ NG+ L A
Sbjct: 1112 YNVTKVHCGSNESFGQRLQVGDVVGCFIDV---PDRTISFSLNGELLMDA 1158
>gi|149018553|gb|EDL77194.1| rCG25482, isoform CRA_a [Rattus norvegicus]
gi|149018554|gb|EDL77195.1| rCG25482, isoform CRA_a [Rattus norvegicus]
Length = 655
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 154 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 204
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILL--KNVVVVMQFSV 232
T+ F NG LGTA F+ S GLG+ A FP I L K V S
Sbjct: 205 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 250
Query: 233 EQGLIPVEGYK 243
G PV G++
Sbjct: 251 PFGTYPVAGFR 261
>gi|124504312|gb|AAI28774.1| Unknown (protein for IMAGE:7132640) [Rattus norvegicus]
Length = 736
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 154 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 204
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 205 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 250
Query: 234 QGLIPVEGYK 243
PV G++
Sbjct: 251 PLRYPVAGFR 260
>gi|118764378|gb|AAI28751.1| Unknown (protein for IMAGE:7099723) [Rattus norvegicus]
Length = 736
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 154 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 204
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 205 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 250
Query: 234 QGLIPVEGYK 243
PV G++
Sbjct: 251 PLRYPVAGFR 260
>gi|449274957|gb|EMC83984.1| E3 ubiquitin-protein ligase RNF123, partial [Columba livia]
Length = 1246
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 102 CRFNQEEG------VGDTPDSYAYDGNRVRKWNVTTTNYGKSWAAGDIVSCLIDLDE--- 152
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
TI F NG LGTA FD + G+G+
Sbjct: 153 GTIAFCLNGISLGTA--FDNITRGVGM 177
>gi|341891069|gb|EGT47004.1| CBN-UNC-68 protein [Caenorhabditis brenneri]
Length = 5370
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 23/130 (17%)
Query: 79 ARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG-TSRGDDPVGKLGETEQSFG 137
A A +NGGK+ F +I++ + ++G G P +LG ++S+
Sbjct: 1095 AEATYAVNGGKWYFEFEILTAGYM-------------KIGWMDVGSTPEIQLGADDRSYA 1141
Query: 138 FGG-TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL----GTAKQF 192
F G G+ H G +G+++ +GD + C +DL + TI F+ NG+ L G+ F
Sbjct: 1142 FDGYLGRKWHQGA-ETYGKEWKIGDVVGCFLDLNDR---TISFSLNGELLLDPSGSEMAF 1197
Query: 193 DAGSNGLGVV 202
D G G+V
Sbjct: 1198 DNVVCGDGLV 1207
>gi|444510619|gb|ELV09641.1| E3 ubiquitin-protein ligase RNF123 [Tupaia chinensis]
Length = 1202
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 155 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 205
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
T+ F NG LGTA F+ S GLG+
Sbjct: 206 GTLSFCLNGVSLGTA--FENLSRGLGM 230
>gi|341881352|gb|EGT37287.1| hypothetical protein CAEBREN_31615 [Caenorhabditis brenneri]
Length = 2681
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 23/130 (17%)
Query: 79 ARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG-TSRGDDPVGKLGETEQSFG 137
A A +NGGK+ F +I++ + ++G G P +LG ++S+
Sbjct: 831 AEATYAVNGGKWYFEFEILTAGYM-------------KIGWMDVGSTPEIQLGADDRSYA 877
Query: 138 FGG-TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL----GTAKQF 192
F G G+ H G +G+++ +GD + C +DL + TI F+ NG+ L G+ F
Sbjct: 878 FDGYLGRKWHQGA-ETYGKEWKIGDVVGCFLDLNDR---TISFSLNGELLLDPSGSEMAF 933
Query: 193 DAGSNGLGVV 202
D G G+V
Sbjct: 934 DNVVCGDGLV 943
>gi|268558708|ref|XP_002637345.1| C. briggsae CBR-UNC-68 protein [Caenorhabditis briggsae]
Length = 5207
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 23/130 (17%)
Query: 79 ARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG-TSRGDDPVGKLGETEQSFG 137
A A +NGGK+ F +I++ + ++G G P +LG ++S+
Sbjct: 1080 AEATYAVNGGKWYFEFEILTAGYM-------------KIGWMDIGSTPEIQLGADDRSYA 1126
Query: 138 FGG-TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL----GTAKQF 192
F G G+ H G +G+++ +GD + C +DL + TI F+ NG+ L G+ F
Sbjct: 1127 FDGYLGRKWHQGA-ETYGKEWKIGDVVGCFLDLNDR---TISFSLNGELLLDPSGSEMAF 1182
Query: 193 DAGSNGLGVV 202
D G G+V
Sbjct: 1183 DNVVCGDGLV 1192
>gi|329765574|ref|ZP_08257150.1| Hypothetical protein Nlim_0918 [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138012|gb|EGG42272.1| Hypothetical protein Nlim_0918 [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 160
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQM-KVPGLLRKHNYSERFQCLMGRA 329
M+G+ SGKTTW + K+YI T+ ++EQ+ ++ G+ +Y+E F + +
Sbjct: 1 MIGVSGSGKTTWV------NSHKQYIACSTDSVIEQLSELMGI----SYTEAFDYIQKKK 50
Query: 330 NAIFDVLLSRASR-------TPRNFIIDQTNVFKSARKRKLRLFVNFRK-------IAVV 375
FD + ++ ++F+ID+T++ + R + +F K + V
Sbjct: 51 K--FDYITTKFFEKIHDCILNDKDFVIDRTHLKRHIRISLINELRSFAKEHGKNLELVGV 108
Query: 376 VFPKPEDLKI-RSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFD 426
F P+ R KR K GK +P + + + D P DE FD
Sbjct: 109 SFELPKSTIFERLKKREKHSGKSIPKQVIQEQIDLF------DIPTLDEGFD 154
>gi|308504051|ref|XP_003114209.1| CRE-UNC-68 protein [Caenorhabditis remanei]
gi|308261594|gb|EFP05547.1| CRE-UNC-68 protein [Caenorhabditis remanei]
Length = 5220
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 23/130 (17%)
Query: 79 ARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVG-TSRGDDPVGKLGETEQSFG 137
A A +NGGK+ F +I++ ++G G P +LG ++S+
Sbjct: 1082 AEATYAVNGGKWYFEFEILTAG-------------FMKIGWMDIGSTPEIQLGADDRSYA 1128
Query: 138 FGG-TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL----GTAKQF 192
F G G+ H G +G+++ +GD + C +DL + TI F+ NG+ L G+ F
Sbjct: 1129 FDGYLGRKWHQGA-ETYGKEWKIGDVVGCFLDLNDR---TISFSLNGELLLDPSGSEMAF 1184
Query: 193 DAGSNGLGVV 202
D G G+V
Sbjct: 1185 DNVVCGDGLV 1194
>gi|444731659|gb|ELW72008.1| ATP-dependent RNA helicase DDX1 [Tupaia chinensis]
Length = 344
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 142 GKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGV 201
GK SH F N+GE+F + DTI C +D++ + F+KNGK LG A +
Sbjct: 141 GKKSHNKQFDNYGEEFTMHDTIGCYLDIDK---GHVKFSKNGKDLGLAFE---------- 187
Query: 202 VDSAVKERQCESAVFPHILLKNVVVVMQFSVEQ-GLIPVEGYKSWVSALD 250
+ + A FP +LKN + F E+ P +G+ + ALD
Sbjct: 188 ----IPQHVKNQAFFPACVLKNAELKFNFGEEEFKFPPKDGFVAVSKALD 233
>gi|302837564|ref|XP_002950341.1| hypothetical protein VOLCADRAFT_90875 [Volvox carteri f.
nagariensis]
gi|300264346|gb|EFJ48542.1| hypothetical protein VOLCADRAFT_90875 [Volvox carteri f.
nagariensis]
Length = 776
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 81/192 (42%), Gaps = 39/192 (20%)
Query: 45 VLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGI---NGGKYCFGCKIVSTQP 101
VL+ D DL + +G + ++ W G RA +G+ GGK + +
Sbjct: 100 VLSTEDRDLHLAVSSDGCTAQSRSEKS----WGGVRATMGVFASCGGKVYYEVTV----- 150
Query: 102 VDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGD 161
+ + + RVG S + LG FGFGGTGK SH F ++GE FG GD
Sbjct: 151 --------NDEGLSRVGWSCSTAAL-DLGTDRLGFGFGGTGKKSHQRQFDSYGEPFGKGD 201
Query: 162 TIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVF-PHIL 220
I C +D ++ ++KNG+ LG A + +S +F P I
Sbjct: 202 VIGCMLDCTGG--GSVSYSKNGRHLGEAFKLPP---------------HLQSQIFLPAIC 244
Query: 221 LKNVVVVMQFSV 232
LKN + F V
Sbjct: 245 LKNAEATVNFGV 256
>gi|194386988|dbj|BAG59860.1| unnamed protein product [Homo sapiens]
Length = 612
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 18/127 (14%)
Query: 112 QHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLES 171
Q +CRVG S + LG + FGFGGTGK SH F N+GE+F + DTI C +D++
Sbjct: 14 QGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK 72
Query: 172 KPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFS 231
+ F+KNGK LG A + + A+FP +LKN + F
Sbjct: 73 ---GHVKFSKNGKDLGLAFE--------------IPPHMKNQALFPACVLKNAELKFNFG 115
Query: 232 VEQGLIP 238
E+ P
Sbjct: 116 EEEFKFP 122
>gi|427780161|gb|JAA55532.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1217
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
+G+T S+ F G +GE + GD I C IDL++ T+ F +NG+ +G
Sbjct: 122 VGDTTDSYAFDGNRVRKWNVATYKYGEAWLAGDVIGCCIDLDN---GTVHFYRNGRSMGE 178
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVEQGLIPVEGYK 243
A FD G G+ A FP + L N +V F PVEGY+
Sbjct: 179 A--FDNVRLGPGL------------AYFPAVSLAFNENLVANFGATPLRYPVEGYR 220
>gi|355716749|gb|AES05710.1| ring finger protein 123 [Mustela putorius furo]
Length = 265
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
T+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGSR 252
Query: 234 QGLIPVEGYK 243
PV GY+
Sbjct: 253 PLRYPVAGYR 262
>gi|443712018|gb|ELU05519.1| hypothetical protein CAPTEDRAFT_20741 [Capitella teleta]
Length = 256
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 30/156 (19%)
Query: 47 NPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMED 106
NP DC + +++NG +H+ A GARA +G + G++C+ ++ P+
Sbjct: 85 NPDDCSHNIYVKENGFT---IHRHPQAQSTDGARAKIGFHTGRHCW--EVWWKGPLGT-- 137
Query: 107 TPPDQQHVCRVGTSRGDDP------VGKLGETEQSFGFGGT-GKFSHGGN------FLNF 153
V VG + P V LG QS+G+ H G+ LN
Sbjct: 138 -------VAVVGIATKAAPQHCSGYVALLGNNNQSWGWNLVDNHLLHNGDCQGNYPLLNN 190
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
K+ G+ + +D E T+ F KN ++LG A
Sbjct: 191 APKYQCGERLRVILDCEDN---TLAFEKNFEFLGVA 223
>gi|294338219|emb|CBJ94256.1| hypothetical phage protein [Campylobacter phage CPt10]
Length = 343
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 22/154 (14%)
Query: 270 MMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHN---YSERFQCLM 326
++VGLP SGK+T+ ++ D + + + IL + +K+N YS+ ++ L
Sbjct: 188 VLVGLPGSGKSTYV--YMNDK-----VAISRDDILMRYG----FKKYNQVEYSDIWRNLT 236
Query: 327 G----RANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKL---RLFVNFRKIAVVVFPK 379
+++F+ RA + +N +ID+TN +R+R L N+ K AVV F
Sbjct: 237 DSDQKEIDSLFNDKFLRALQKNQNILIDKTNTSVKSRRRLFTASSLVRNYHKKAVV-FLT 295
Query: 380 PEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
P + + +++ GK + V+ ML ++V+P
Sbjct: 296 PYTMILNRLEKRNSTGKVINKSVVDTMLKSFVMP 329
>gi|156395455|ref|XP_001637126.1| predicted protein [Nematostella vectensis]
gi|156224236|gb|EDO45063.1| predicted protein [Nematostella vectensis]
Length = 1151
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
+G+T SF + G + +GE++ GD I CAIDL+ TI +++NGK LG
Sbjct: 36 VGDTADSFAYDGHRVRKWNVSTAKYGEEWMAGDVIGCAIDLDE---GTISYSRNGKHLGV 92
Query: 189 A 189
A
Sbjct: 93 A 93
>gi|327265711|ref|XP_003217651.1| PREDICTED: e3 ubiquitin-protein ligase RNF123-like [Anolis
carolinensis]
Length = 1307
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 154 CRFNQEEG------VGDTPDSYAYDGNRVRKWNVTTTNYGKSWAAGDIVSCLIDLDE--- 204
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
+I F NG LGTA FD S G G+ A FP I L V F
Sbjct: 205 GSISFCLNGVSLGTA--FDNISRGSGM------------AYFPAISLSFKESVAFNFGSR 250
Query: 234 QGLIPVEGYK 243
P+ GY+
Sbjct: 251 PLRYPLTGYR 260
>gi|47224229|emb|CAG09075.1| unnamed protein product [Tetraodon nigroviridis]
Length = 744
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 46 LNPADCDLDFDIEDNGL--KSSGLHQEGFAYCWSGARANVGINGGKY-------CFGCKI 96
+NP D F I +GL +S + W G R+ G+ G + F I
Sbjct: 89 MNPYDRSSAFAIGPDGLCCQSREFKE------WHGCRSTKGVTKGVFLKWWDCATFDMNI 142
Query: 97 VSTQPVD----MEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLN 152
S + E T DQ +CRVG S + LG + FGFGGTGK S+ F +
Sbjct: 143 YSFFNISGKYYYEVTCHDQG-LCRVGWSTSQAAL-DLGTDKYGFGFGGTGKKSNNKQFDS 200
Query: 153 FGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
+GE+F + DTI C +DLE A I F+KNG LG A
Sbjct: 201 YGEEFTMHDTIGCYLDLEK---AQISFSKNGNDLGLA 234
>gi|307168860|gb|EFN61784.1| E3 ubiquitin-protein ligase RNF123 [Camponotus floridanus]
Length = 1279
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 21/129 (16%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGK---LGET 132
+S RAN G+ GK+ + ++ S + V +VG + +G+T
Sbjct: 99 FSTMRANTGVFKGKWMYEVQLGS-------------KGVMQVGWGTAQCKFNQQYGVGDT 145
Query: 133 EQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQF 192
S+ + G +GE + GD I CA+D++ TI F +NGK LG K F
Sbjct: 146 PNSYAYDGNRVRKWNVTTHKYGESWLTGDIIGCALDMDD---GTIDFYRNGKSLG--KAF 200
Query: 193 DAGSNGLGV 201
+ S G G+
Sbjct: 201 ENISMGAGI 209
>gi|330846332|ref|XP_003294992.1| hypothetical protein DICPUDRAFT_93323 [Dictyostelium purpureum]
gi|325074423|gb|EGC28483.1| hypothetical protein DICPUDRAFT_93323 [Dictyostelium purpureum]
Length = 561
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 133 EQSFGFGGTGKFSHGGNFL-NFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
E S+G+ G GKF G N + ++G F GD I C D SK L F KNG++LG A
Sbjct: 99 EGSYGYMGDGKFYFGVNEIKDYGPTFTSGDVIGCGYDSSSKSLY---FTKNGEYLGIA 153
>gi|434388218|ref|YP_007098829.1| putative kinase [Chamaesiphon minutus PCC 6605]
gi|428019208|gb|AFY95302.1| putative kinase [Chamaesiphon minutus PCC 6605]
Length = 282
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 10/84 (11%)
Query: 267 EVMMMVGLPASGKTTWAEKWVKDHPEK--------RYILLGTNLILEQ-MKVPGLLRKHN 317
++++ GLPASGKTTWA+++++ +PE R L GTN ++ +KV LL +H
Sbjct: 4 KLILTKGLPASGKTTWAKEYIQKYPETANLCKDDLRLQLSGTNKREKRIIKVRDLLTEHY 63
Query: 318 YSERFQCLMGRANAIFDVLLSRAS 341
+ + + + N + V L RA+
Sbjct: 64 FEQGYSVIWSDTN-LNPVHLRRAT 86
>gi|194863381|ref|XP_001970412.1| GG23389 [Drosophila erecta]
gi|190662279|gb|EDV59471.1| GG23389 [Drosophila erecta]
Length = 5172
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLA 175
H G+ +FG ++ GD I C ID++ + ++
Sbjct: 1133 HNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQTIS 1168
>gi|395760122|gb|AFN70718.1| ATP-dependent RNA helicase DDX1 [Botryllus schlosseri]
Length = 743
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 22 KAKVDDPVSDSSASGPRSQKQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARA 81
K + + S +++ P + K + +NP D F I +GL L Q W G R+
Sbjct: 68 KCETGNASSKNASGNPLANKWQ--MNPHDRGKSFAISSDGL----LCQCREFKEWQGCRS 121
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQSFGFGGT 141
+ GKY + E T D+ +CR+G S D + LG + FGFGGT
Sbjct: 122 TRAVTEGKYYY------------EVTCKDEG-LCRMGWSTLDADL-NLGTDKYGFGFGGT 167
Query: 142 GKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
GK S F +GE F + D I C ID+ TI F+KNG LG A
Sbjct: 168 GKKSFNRQFDTYGEPFTMHDVIGCYIDVGQ---GTIMFSKNGTDLGHA 212
>gi|17352471|ref|NP_476994.1| ryanodine receptor 44F, isoform D [Drosophila melanogaster]
gi|21645561|gb|AAM71084.1| ryanodine receptor 44F, isoform D [Drosophila melanogaster]
Length = 5113
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
+ +GG +FG++ G GD + +DL TI F+ NG+ L G D
Sbjct: 1133 HNEEKVYGGVSESFGKQCGPGDIVGVFLDLADH---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|386767553|ref|NP_001246207.1| ryanodine receptor 44F, isoform E [Drosophila melanogaster]
gi|383302347|gb|AFH07962.1| ryanodine receptor 44F, isoform E [Drosophila melanogaster]
Length = 5117
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1090 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1136
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
+ +GG +FG++ G GD + +DL TI F+ NG+ L G D
Sbjct: 1137 HNEEKVYGGVSESFGKQCGPGDIVGVFLDLADH---TISFSLNGELLMDALGGETTFADV 1193
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1194 TAEGVGFV 1201
>gi|386767561|ref|NP_001246211.1| ryanodine receptor 44F, isoform I [Drosophila melanogaster]
gi|383302351|gb|AFH07966.1| ryanodine receptor 44F, isoform I [Drosophila melanogaster]
Length = 5134
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
+ +GG +FG++ G GD + +DL TI F+ NG+ L G D
Sbjct: 1133 HNEEKVYGGVSESFGKQCGPGDIVGVFLDLADH---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|17352469|ref|NP_476993.1| ryanodine receptor 44F, isoform C [Drosophila melanogaster]
gi|21645560|gb|AAM71083.1| ryanodine receptor 44F, isoform C [Drosophila melanogaster]
Length = 5127
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
+ +GG +FG++ G GD + +DL TI F+ NG+ L G D
Sbjct: 1133 HNEEKVYGGVSESFGKQCGPGDIVGVFLDLADH---TISFSLNGELLMDALGGETTFADV 1189
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1190 TAEGVGFV 1197
>gi|55728942|emb|CAH91209.1| hypothetical protein [Pongo abelii]
Length = 281
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 25/131 (19%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDL-ESKP 173
CR G +G+T S+ + G N+G+ + GD + C IDL + P
Sbjct: 156 CRFNQEEG------VGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDDGTP 209
Query: 174 LATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSV 232
L+ F NG LGTA F+ S GLG+ A FP I L V F
Sbjct: 210 LS---FCLNGVSLGTA--FENLSRGLGM------------AYFPAISLSFKESVAFNFGS 252
Query: 233 EQGLIPVEGYK 243
PV GY+
Sbjct: 253 RPLRYPVAGYR 263
>gi|2160477|dbj|BAA41471.1| ryanodine receptor homologue [Drosophila melanogaster]
Length = 5112
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1085 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1131
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
+ +GG +FG++ G GD + +DL TI F+ NG+ L G D
Sbjct: 1132 HNEEKVYGGVSESFGKQCGPGDIVGVFLDLADH---TISFSLNGELLMDALGGETTFADV 1188
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1189 TAEGVGFV 1196
>gi|66810666|ref|XP_639040.1| non-receptor tyrosine kinase [Dictyostelium discoideum AX4]
gi|161789021|sp|P18160.3|SPLA_DICDI RecName: Full=Dual specificity protein kinase splA; AltName:
Full=Non-receptor tyrosine kinase spore lysis A;
AltName: Full=Tyrosine-protein kinase 1
gi|60467658|gb|EAL65677.1| non-receptor tyrosine kinase [Dictyostelium discoideum AX4]
Length = 2410
Score = 41.6 bits (96), Expect = 0.71, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 118 GTSRGDDPVGKL-GETEQSFGFGGTGKFSHGGNFLN-FGEKFGVGDTIICAIDLESKPLA 175
G + D P+ G + S+G+ G GK G N +G F GD + C D SK
Sbjct: 903 GLTTNDHPIEVYPGNYQGSYGYSGDGKCYFGTNEGRVYGPSFSSGDVVGCGYDSSSK--- 959
Query: 176 TIGFAKNGKWLGTAKQ 191
T+ F KNG +LG A Q
Sbjct: 960 TLYFTKNGVYLGVAAQ 975
>gi|2160476|dbj|BAA41470.1| ryanodine receptor homologue [Drosophila melanogaster]
Length = 5126
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F +++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1085 NYAVTSGKWYFEFEVLTSGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1131
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL-----GTAKQFDA 194
+ +GG +FG++ G GD + +DL TI F+ NG+ L G D
Sbjct: 1132 HNEEKVYGGVSESFGKQCGPGDIVGVFLDLADH---TISFSLNGELLMDALGGETTFADV 1188
Query: 195 GSNGLGVV 202
+ G+G V
Sbjct: 1189 TAEGVGFV 1196
>gi|124009955|ref|ZP_01694620.1| metal-dependent phosphohydrolase [Microscilla marina ATCC 23134]
gi|123984039|gb|EAY24417.1| metal-dependent phosphohydrolase [Microscilla marina ATCC 23134]
Length = 377
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 267 EVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLM 326
EV ++ GLP +GK TW + + D P ++ + + +++ G+ K N + Q
Sbjct: 237 EVFLLCGLPGAGKDTWIDTYATDLP-----VVSLDKLRQEL---GVSFKDNQGKVIQAAQ 288
Query: 327 GRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFR-KIAVVVFPKP 380
+A R ++F+ + TN+ + RK+ + LF +R +V PKP
Sbjct: 289 EKAKECL--------RKQQSFVWNATNITRQNRKKLIDLFSQYRGSTTIVYLPKP 335
>gi|195122430|ref|XP_002005714.1| GI18926 [Drosophila mojavensis]
gi|193910782|gb|EDW09649.1| GI18926 [Drosophila mojavensis]
Length = 5175
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F ++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTAGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLA 175
H G +FG ++ GD I C ID++ + ++
Sbjct: 1133 HNVTKMHAGTIEHFGVRYEAGDVIGCFIDVKEQTIS 1168
>gi|195057835|ref|XP_001995333.1| GH23101 [Drosophila grimshawi]
gi|193899539|gb|EDV98405.1| GH23101 [Drosophila grimshawi]
Length = 5174
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 82 NVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGD-DPVGKLGETEQSFGFGG 140
N + GK+ F ++++ P+ RVG +R D P LG + S+ F G
Sbjct: 1086 NYAVTSGKWYFEFEVLTAGPM-------------RVGWARADCYPGAMLGSEDTSWAFDG 1132
Query: 141 TGKFS-HGGNFLNFGEKFGVGDTIICAIDLESKPLA 175
H G +FG ++ GD I C ID++ + ++
Sbjct: 1133 HNVTKMHAGTIEHFGVRYEAGDVIGCFIDVKEQTIS 1168
>gi|358333372|dbj|GAA51888.1| Ran-binding protein 10 [Clonorchis sinensis]
Length = 916
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 133 EQSFGFGGTGKFSHGGNF--LNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
SFG+ G HG + FG +FG DT+ C +D S+ ++ F +NG +LG A
Sbjct: 42 HSSFGYHNDGSVYHGSASAGIKFGPRFGENDTVGCGVDFMSR---SLFFTRNGVFLGKA 97
>gi|340345264|ref|ZP_08668396.1| SPRY domain-containing protein, putative [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339520405|gb|EGP94128.1| SPRY domain-containing protein, putative [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 160
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 42/175 (24%)
Query: 271 MVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMK-VPGLLRKHNYSERFQCLMGRA 329
M+G+ SGKTT WV H E Y+ T+ ++E++ + G+ +Y++ F + +
Sbjct: 1 MIGVSGSGKTT----WVNSHKE--YVACSTDFVIEELADIMGI----SYTQAFDYIQNKK 50
Query: 330 NAIFDVLLSRASR-------TPRNFIIDQTNVFKSARKRKLRLFVNFR-------KIAVV 375
FD + S+ ++F+ID+T++ + R + +F +++ V
Sbjct: 51 K--FDYITSKFFEKIHDCILNDKDFVIDRTHLKRHIRISLINELKSFALEHGKNLELSAV 108
Query: 376 VFPKP-----EDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELF 425
F P E LK R K K + KEV D +N+ D P DE F
Sbjct: 109 SFELPKNVIFERLKNREKKSRKSIPKEVILDQINSF----------DIPTLDEGF 153
>gi|334333729|ref|XP_001378156.2| PREDICTED: e3 ubiquitin-protein ligase RNF123 [Monodelphis
domestica]
Length = 1308
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 24/130 (18%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL+
Sbjct: 158 CRFNQEEG------VGDTPDSYAYDGNRVRKWNVTTTNYGKSWAAGDIVSCLIDLDE--- 208
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLK-NVVVVMQFSVE 233
I F NG LGTA FD + G G+ A FP I L V F
Sbjct: 209 GIISFCLNGVSLGTA--FDNITRGSGM------------AYFPAISLSFKESVAFNFGSR 254
Query: 234 QGLIPVEGYK 243
P+E Y+
Sbjct: 255 PLRYPMEDYR 264
>gi|340718399|ref|XP_003397655.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RNF123-like [Bombus terrestris]
Length = 1212
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
+S RAN + GK+ + ++ + + + + + C G +G+T S
Sbjct: 97 FSTIRANTAVYQGKWMYEVQLRTKGLMQIGWSTVN----CTFTQESG------VGDTINS 146
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
+ + G +GE + GD I CA+DLE+ + F +NG+ LG A F+
Sbjct: 147 YAYDGNRVRKWNAATFTYGEPWHTGDIIGCALDLEN---GNVDFYRNGRCLGRA--FENI 201
Query: 196 SNGLG-----VVDSAVKE 208
S G G V A+KE
Sbjct: 202 SMGAGFAYFPTVSLALKE 219
>gi|348581472|ref|XP_003476501.1| PREDICTED: E3 ubiquitin-protein ligase RNF123-like [Cavia
porcellus]
Length = 1314
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL++
Sbjct: 156 CRFNQEEG------VGDTPNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDA--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
T+ F NG LGTA F+ S G G+
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSKGQGM 231
>gi|104781369|ref|YP_607867.1| hypothetical protein PSEEN2248 [Pseudomonas entomophila L48]
gi|95110356|emb|CAK15064.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 381
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 267 EVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLM 326
+V+M+ GLPASGK TW + HP+ L + + GL N +
Sbjct: 238 QVVMLSGLPASGKDTWT---ARHHPD-----LPVVSFDDARQALGLRHGQNEGAAAHYAI 289
Query: 327 GRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLKI 385
RA A+ R R F+ + T++ R R L L + ++ +V +PE
Sbjct: 290 DRAKALL--------REQRPFVWNSTHLSAQMRSRTLDLLYGYGAQVEIVYLERPE---A 338
Query: 386 RSVKRFKEMGKEVPADAVNNMLANYVLPV 414
++R + + D + ML + +P+
Sbjct: 339 EIMRRNQRRDTSLRNDDIRRMLFKWEVPL 367
>gi|351711893|gb|EHB14812.1| E3 ubiquitin-protein ligase RNF123, partial [Heterocephalus glaber]
Length = 1289
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 115 CRVGTSRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPL 174
CR G +G+T S+ + G N+G+ + GD + C IDL++
Sbjct: 156 CRFNHEEG------VGDTPNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDA--- 206
Query: 175 ATIGFAKNGKWLGTAKQFDAGSNGLGV 201
T+ F NG LGTA F+ S G G+
Sbjct: 207 GTLSFCLNGVSLGTA--FENLSKGQGM 231
>gi|125808490|ref|XP_001360772.1| GA18323 [Drosophila pseudoobscura pseudoobscura]
gi|195150935|ref|XP_002016405.1| GL10506 [Drosophila persimilis]
gi|121988648|sp|Q290L5.1|FBSP1_DROPS RecName: Full=F-box/SPRY domain-containing protein 1
gi|257096353|sp|B4GBN7.1|FBSP1_DROPE RecName: Full=F-box/SPRY domain-containing protein 1
gi|54635944|gb|EAL25347.1| GA18323 [Drosophila pseudoobscura pseudoobscura]
gi|194110252|gb|EDW32295.1| GL10506 [Drosophila persimilis]
Length = 255
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 30/156 (19%)
Query: 47 NPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMED 106
NP+DC + I+ NG LH+ A ARA +G G++ + +++ P+
Sbjct: 84 NPSDCSRNVYIKPNGFT---LHRNPVAQSTDAARAKIGFRHGRHAW--EVIWEGPLGT-- 136
Query: 107 TPPDQQHVCRVGTSRGDDP------VGKLGETEQSFGFG-------GTGKFSHGGNFLNF 153
V +G S + V LG +QS+G+ G G LN
Sbjct: 137 -------VAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGGYPLLNN 189
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
K+ VG+ I +D + T+ F KN ++LG A
Sbjct: 190 APKYQVGERIRVILDCDDN---TLSFEKNYEFLGVA 222
>gi|423283905|ref|ZP_17262789.1| hypothetical protein HMPREF1204_02327 [Bacteroides fragilis HMW
615]
gi|404580451|gb|EKA85160.1| hypothetical protein HMPREF1204_02327 [Bacteroides fragilis HMW
615]
Length = 370
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEV ++VGLP GK + E D P + + + RKH +S +
Sbjct: 225 CEVTLLVGLPGMGKDYYIESRCADMP--------------VVSLDAIRRKHKFSPTDKAA 270
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLK 384
G R ++FI + TNV + R + + LF+ + ++ +V KP +
Sbjct: 271 NGWVAQTAKEQARIYLRKGQDFIWNATNVSRQRRTQLIDLFITYGARVKIVYIEKPYSVW 330
Query: 385 IR--SVKRFKEMGKEVPADAVNNMLANYVLP 413
R S + + EVP ++ ML +P
Sbjct: 331 RRQNSTREY-----EVPETVLDKMLGRLEVP 356
>gi|423256826|ref|ZP_17237749.1| hypothetical protein HMPREF1055_00026 [Bacteroides fragilis
CL07T00C01]
gi|423266209|ref|ZP_17245212.1| hypothetical protein HMPREF1056_02899 [Bacteroides fragilis
CL07T12C05]
gi|387778302|gb|EIK40397.1| hypothetical protein HMPREF1055_00026 [Bacteroides fragilis
CL07T00C01]
gi|392701564|gb|EIY94722.1| hypothetical protein HMPREF1056_02899 [Bacteroides fragilis
CL07T12C05]
Length = 370
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEV ++VGLP GK + E D P + + + RKH +S +
Sbjct: 225 CEVTLLVGLPGMGKDYYIESRCADMP--------------VVSLDAIRRKHKFSPTDKAT 270
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLK 384
G R ++FI + TNV + R + + LF+ + ++ +V KP +
Sbjct: 271 NGWVAQTAKEQARIYLRKGQDFIWNATNVSRQRRTQLIDLFITYGARVKIVYIEKPYSVW 330
Query: 385 IR--SVKRFKEMGKEVPADAVNNMLANYVLP 413
R S + + EVP ++ ML +P
Sbjct: 331 RRQNSTREY-----EVPETVLDKMLGRLEVP 356
>gi|375358994|ref|YP_005111766.1| hypothetical protein BF638R_2734 [Bacteroides fragilis 638R]
gi|301163675|emb|CBW23229.1| conserved hypothetical protein [Bacteroides fragilis 638R]
Length = 370
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEV ++VGLP GK + E D P + + + RKH +S +
Sbjct: 225 CEVTLLVGLPGMGKDYYIESRCADMP--------------VVSLDAIRRKHKFSPTDKAT 270
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLK 384
G R ++FI + TNV + R + + LF+ + ++ +V KP +
Sbjct: 271 NGWVAQTAKEQARIYLRKGQDFIWNATNVSRQRRTQLIDLFITYGARVKIVYIEKPYSVW 330
Query: 385 IR--SVKRFKEMGKEVPADAVNNMLANYVLP 413
R S + + EVP ++ ML +P
Sbjct: 331 RRQNSTREY-----EVPETVLDKMLGRLEVP 356
>gi|326672661|ref|XP_003199712.1| PREDICTED: ryanodine receptor 2-like, partial [Danio rerio]
Length = 3100
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 79 ARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSR-GDDPVGKLGETEQSFG 137
A +NGGK+ F ++V+ + RVG +R G P +LG EQ+F
Sbjct: 995 AEKTYCVNGGKWYFELEVVTAGEM-------------RVGWARPGCLPDQELGADEQAFV 1041
Query: 138 FGG-TGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL 186
F G + H GN +FG + GD + C +D+ + T+ F NG+ L
Sbjct: 1042 FDGFKAQRWHQGN-EHFGRSWQSGDVVGCMVDMNER---TMMFTLNGEVL 1087
>gi|53714000|ref|YP_099992.1| hypothetical protein BF2708 [Bacteroides fragilis YCH46]
gi|52216865|dbj|BAD49458.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 370
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEV ++VGLP GK + E D P + + + RKH +S +
Sbjct: 225 CEVTLLVGLPGMGKDYYIESRCADMP--------------VVSLDAIRRKHKFSPTDKAA 270
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLK 384
G R ++FI + TNV + R + + LF+ + ++ +V KP +
Sbjct: 271 NGWVAQTAKEQARIYLRKGQDFIWNATNVSRQRRTQLIDLFITYGARVKIVYIEKPYSVW 330
Query: 385 IR--SVKRFKEMGKEVPADAVNNMLANYVLP 413
R S + + EVP ++ ML +P
Sbjct: 331 RRQNSTREY-----EVPETVLDKMLGRLEVP 356
>gi|423271868|ref|ZP_17250838.1| hypothetical protein HMPREF1079_03920 [Bacteroides fragilis
CL05T00C42]
gi|423276348|ref|ZP_17255289.1| hypothetical protein HMPREF1080_03942 [Bacteroides fragilis
CL05T12C13]
gi|392696724|gb|EIY89916.1| hypothetical protein HMPREF1079_03920 [Bacteroides fragilis
CL05T00C42]
gi|392697389|gb|EIY90574.1| hypothetical protein HMPREF1080_03942 [Bacteroides fragilis
CL05T12C13]
Length = 370
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEV ++VGLP GK + E D P + + + RKH +S +
Sbjct: 225 CEVTLLVGLPGMGKDYYIESRCADMP--------------VVSLDAIRRKHKFSPTDKAA 270
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLK 384
G R ++FI + TNV + R + + LF+ + ++ +V KP +
Sbjct: 271 NGWVAQTAKEQARIYLRKGQDFIWNATNVSRQRRTQLIDLFITYGARVKIVYIEKPYSVW 330
Query: 385 IR--SVKRFKEMGKEVPADAVNNMLANYVLP 413
R S + + EVP ++ ML +P
Sbjct: 331 RRQNSTREY-----EVPETVLDKMLGRLEVP 356
>gi|974334|gb|AAB41125.1| non-receptor tyrosine kinase [Dictyostelium discoideum]
Length = 1584
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 114 VCRVGTSRGDDPVGKL-GETEQSFGFGGTGKFSHGGNFLN-FGEKFGVGDTIICAIDLES 171
+C G + D P+ G + S+G+ G GK G N +G F GD + C D S
Sbjct: 74 IC-FGLTTNDHPIEVYPGNYQGSYGYSGDGKCYFGTNEGRVYGPSFSSGDVVGCGYDSSS 132
Query: 172 KPLATIGFAKNGKWLGTAKQ 191
K T+ F KNG +LG A Q
Sbjct: 133 K---TLYFTKNGVYLGVAAQ 149
>gi|294338026|emb|CBJ93864.1| hypothetical phage protein [Campylobacter phage CP220]
Length = 343
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 270 MMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHN---YSERFQCLM 326
++VGLP SGK+T+ ++ D + + + IL + +K+N YS+ ++ L
Sbjct: 188 VLVGLPCSGKSTYV--YMNDK-----VAISRDDILMRYG----FKKYNQVEYSDIWRNLT 236
Query: 327 G----RANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKL---RLFVNFRKIAVVVFPK 379
+++F+ RA + +N +ID+TN +R+R L N+ K A VVF
Sbjct: 237 DSDQKEIDSLFNDKFLRALQKNQNILIDKTNTSVKSRRRLFATSSLVRNYHKKA-VVFLT 295
Query: 380 PEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
P + + +++ GK + V+ ML ++ +P
Sbjct: 296 PYTMILNRLEKRNSTGKVINKSVVDTMLKSFAMP 329
>gi|265764350|ref|ZP_06092918.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263256958|gb|EEZ28304.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 370
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEV ++VGLP GK + E D P + + + RKH +S +
Sbjct: 225 CEVTLLVGLPGMGKDYYIESRCADMP--------------VVSLDAIRRKHKFSPTDKAA 270
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLK 384
G R ++FI + TNV + R + + LF+ + ++ +V KP +
Sbjct: 271 NGWVAQTAKEQARIYLRKGQDFIWNATNVSRQRRTQLIDLFITYGARVKIVYIEKPYSVW 330
Query: 385 IR--SVKRFKEMGKEVPADAVNNMLANYVLP 413
R S + + EVP ++ ML +P
Sbjct: 331 RRQNSTREY-----EVPETVLDKMLGRLEVP 356
>gi|336410376|ref|ZP_08590856.1| hypothetical protein HMPREF1018_02873 [Bacteroides sp. 2_1_56FAA]
gi|335945432|gb|EGN07245.1| hypothetical protein HMPREF1018_02873 [Bacteroides sp. 2_1_56FAA]
Length = 370
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEV ++VGLP GK + E D P + + + RKH +S +
Sbjct: 225 CEVTLLVGLPGMGKDYYIESRCADMP--------------VVSLDAIRRKHKFSPTDKAA 270
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLK 384
G R ++FI + TNV + R + + LF+ + ++ +V KP +
Sbjct: 271 NGWVAQTAKEQARIYLRKGQDFIWNATNVSRQRRTQLIDLFITYGARVKIVYIEKPYSVW 330
Query: 385 IR--SVKRFKEMGKEVPADAVNNMLANYVLP 413
R S + + EVP ++ ML +P
Sbjct: 331 RRQNSTREY-----EVPETVLDKMLGRLEVP 356
>gi|225182139|ref|ZP_03735564.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1]
gi|225167168|gb|EEG75994.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1]
Length = 157
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 265 DCEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQC 324
+ V + +G+PASGK++WA+K ++++P K++ L ++ I E + HN + FQ
Sbjct: 2 ELRVCLFIGIPASGKSSWAQKLLRENP-KKFSYLSSDEIRESVFGDVANMSHN-ALVFQI 59
Query: 325 LMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLK 384
+ R + A R+ I+D T V S R+ ++L + + K DL
Sbjct: 60 MKDR--------MITALENERSVILDATFVKASERQPFIQLAKELEAQVMAYYIKT-DLG 110
Query: 385 IRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
+++R + + VPA+ + L + + P E FD+
Sbjct: 111 -EALQRNENRKRRVPAEVIRQRLKDV------EEPAPAEGFDR 146
>gi|374635037|ref|ZP_09706642.1| L-seryl-tRNA(Sec) kinase [Methanotorris formicicus Mc-S-70]
gi|373563439|gb|EHP89633.1| L-seryl-tRNA(Sec) kinase [Methanotorris formicicus Mc-S-70]
Length = 266
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 22/162 (13%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPE--KRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++VGLP+ GKTT+++K K+ + I+LG++LI E V + E+++
Sbjct: 2 LIILVGLPSVGKTTFSKKLSKELYKIGIDNIVLGSDLIRESFPV--------WDEKYEEF 53
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKI 385
+ +D L+ +A + I+D TN + S R+ + + +K +V++ LKI
Sbjct: 54 IKETT--YD-LIDKALK-KYTVIVDDTNYYNSKRRDLINIAKKNKKNYMVIYLYAP-LKI 108
Query: 386 RSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
+KR E GK++P + + M + D PG +D+
Sbjct: 109 -LLKRNVERGKKIPNEVIIKMFEKF------DKPGEKYKWDE 143
>gi|333910055|ref|YP_004483788.1| L-seryl-tRNA(Sec) kinase [Methanotorris igneus Kol 5]
gi|333750644|gb|AEF95723.1| L-seryl-tRNA(Sec) kinase [Methanotorris igneus Kol 5]
Length = 271
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 84/163 (51%), Gaps = 24/163 (14%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEK--RYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++VGLP+ GKTT+++K K+ + I+LG++LI E V ++E+++
Sbjct: 2 LIILVGLPSVGKTTFSKKLSKELHKMGIDNIVLGSDLIRESFPV--------WNEKYEEF 53
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVF-PKPEDLK 384
+ A +D L+ +A + I+D TN + S R+ + + +K ++++ P ++
Sbjct: 54 IKEAT--YD-LIDKALK-KYTVIVDDTNYYNSKRRDLINIAKKNKKNYMIIYLHAPLEI- 108
Query: 385 IRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
+KR E G+++P + + M + D PG +D+
Sbjct: 109 --LLKRNVERGEKIPNEVIIKMFEKF------DKPGEKYKWDE 143
>gi|354584132|ref|ZP_09003028.1| metal dependent phosphohydrolase [Paenibacillus lactis 154]
gi|353196888|gb|EHB62386.1| metal dependent phosphohydrolase [Paenibacillus lactis 154]
Length = 319
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCLMG 327
+ M+ G+P SGK+ +A++ K +R +L+ T+ I E++ +K+ Y
Sbjct: 4 IHMLAGIPGSGKSQYAKECCK---RERAVLVATDAIREKLFGSETRQKNTYR-------- 52
Query: 328 RANAIFD---VLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAV 374
IFD + +A + RN + D TNV AR R+++ F K+ V
Sbjct: 53 ----IFDEAFAEIEQALASGRNVVFDATNV---ARNRRVQFLKRFNKVPV 95
>gi|195129041|ref|XP_002008967.1| GI13782 [Drosophila mojavensis]
gi|193920576|gb|EDW19443.1| GI13782 [Drosophila mojavensis]
Length = 728
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 68/156 (43%), Gaps = 32/156 (20%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G K+ + E T D+ +CRVG S + LG
Sbjct: 118 WHGCRATTGVYGKAKFYY------------EATVTDEG-LCRVGWSTQMANL-DLGTCRY 163
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++GE FG D + C +DL+ + F KNG LG A +
Sbjct: 164 GFGFGGTGKKSNNRQFDDYGEAFGKADVVGCMLDLQR---LEVSFTKNGAALGVAFK--- 217
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
+ E +P ++LKN ++ F
Sbjct: 218 -----------IPENLRNDTFYPAVVLKNAEMLFNF 242
>gi|330794900|ref|XP_003285514.1| hypothetical protein DICPUDRAFT_53617 [Dictyostelium purpureum]
gi|325084517|gb|EGC37943.1| hypothetical protein DICPUDRAFT_53617 [Dictyostelium purpureum]
Length = 1420
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 112 QHVCRVGTSRGDDPVGKL-GETEQSFGFGGTGKFSHG-GNFLNFGEKFGVGDTIICAIDL 169
+ +C G + D P+ G S+G+ G GK G G +G F GD I C D
Sbjct: 67 EKIC-FGLTNNDHPIDIYPGYFRSSYGYMGDGKIYGGTGEGKVYGPTFTAGDVIGCGYDS 125
Query: 170 ESKPLATIGFAKNGKWLGTAKQ 191
+K TI F KNG +LG+A Q
Sbjct: 126 SAK---TIFFTKNGVYLGSAFQ 144
>gi|391334179|ref|XP_003741485.1| PREDICTED: E3 ubiquitin-protein ligase RNF123-like [Metaseiulus
occidentalis]
Length = 1097
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
+G+T+ S+ F G + +N+G + GD I C +DL+S ++ F +NG LG
Sbjct: 155 VGDTKDSYAFDGNRIRKWNVSNMNYGVAWLAGDVIGCCLDLDS---GSLSFYRNGVCLGE 211
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHILL---KNVVVVMQFSVEQGLIPVEGYKSW 245
A F G G A FP + L +N+V F + PV+GY
Sbjct: 212 A--FKNIRRGPGY------------AYFPAVSLSFGENLVA--NFGTSRFRYPVDGYSPL 255
Query: 246 VSALD 250
V A D
Sbjct: 256 VPATD 260
>gi|193678725|ref|XP_001945450.1| PREDICTED: f-box/SPRY domain-containing protein 1-like
[Acyrthosiphon pisum]
Length = 257
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 30/156 (19%)
Query: 47 NPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMED 106
NP DC + ++ NG LH+ A AR +G N GK+ + +I T P+
Sbjct: 86 NPDDCSMHIVVKQNGFT---LHRNPVAQSTDMARTKIGYNSGKHVW--EITWTGPLGT-- 138
Query: 107 TPPDQQHVCRVGTSRGDDPVG------KLGETEQSFGFGGTGK------FSHGGN-FLNF 153
V VG S + PV LG + S+G+ SHG LN
Sbjct: 139 -------VAMVGVSTKEAPVHCSGYLPLLGIDKHSWGWNLIDNVLLHNGVSHGNYPLLNN 191
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
K+ +G+ + +D E+ + F K ++LG A
Sbjct: 192 APKYQIGEKLQLILDSEN---GILHFEKCNEFLGIA 224
>gi|343477654|emb|CCD11574.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 2130
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 133 EQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQ 191
E S F G H G + F + VGD I C I + P A + F +NGK+LG A +
Sbjct: 1904 EPSVAFCSDGTVRHSGRRVQFTGTWSVGDVIGCGILV---PSAAVFFTRNGKFLGIATE 1959
>gi|318054551|ref|NP_001187286.1| spry domain-containing socs box protein 3 [Ictalurus punctatus]
gi|308322619|gb|ADO28447.1| spry domain-containing socs box protein 3 [Ictalurus punctatus]
Length = 362
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LG+ E S+G TG H G+ +NF +FG G I +D T+ F KN K +G
Sbjct: 188 LGKDEDSWGLSYTGLLHHNGDKVNFSSRFGQGSIIGVHLDTWH---GTLTFFKNRKCIGV 244
Query: 189 A 189
A
Sbjct: 245 A 245
>gi|405972670|gb|EKC37426.1| Ryanodine receptor 44F [Crassostrea gigas]
Length = 2510
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 79 ARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSR-GDDPVGKLGETEQSFG 137
A G+ GK+ + ++++ + +VG ++ DP +LG S+
Sbjct: 878 AETTYGVTSGKWYYEFEVITAE-------------FMKVGWAKISLDPSTELGLDGNSYA 924
Query: 138 FGGTG--KFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL 186
F G G K++HG +G+++ GD I C +DL K TI F+ NG+ +
Sbjct: 925 FDGFGGRKWNHGAE--PYGKQWRSGDVIGCMLDLNDK---TITFSLNGELM 970
>gi|194873161|ref|XP_001973151.1| GG15936 [Drosophila erecta]
gi|190654934|gb|EDV52177.1| GG15936 [Drosophila erecta]
Length = 342
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 126 VGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKW 185
V LG QS+GF +G+ H G L +G+KF G I +D S L F N +
Sbjct: 127 VSALGTNAQSWGFSYSGRIQHCGELLPYGQKFSQGCLIGVCLDRASGQLE---FYLNRRS 183
Query: 186 LGTA 189
LG A
Sbjct: 184 LGVA 187
>gi|308470922|ref|XP_003097693.1| hypothetical protein CRE_14234 [Caenorhabditis remanei]
gi|308239811|gb|EFO83763.1| hypothetical protein CRE_14234 [Caenorhabditis remanei]
Length = 649
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 117 VGTSRGDDPVGKL-GETEQSFGFGGT--GKFSHGGNFLNFGEKFGVGDTIICAIDLESKP 173
VG S+ + ++ G +G+ G FS G+ +G KFG GD I C ID
Sbjct: 88 VGLSKQGGELNRMPGWDPHCYGYHGDDGNFFSACGHGTAYGPKFGTGDVIGCGIDTT--- 144
Query: 174 LATIGFAKNGKWLGTAKQFDAG 195
L + F KNGK LG A + G
Sbjct: 145 LNMVFFTKNGKHLGVALECKPG 166
>gi|428169865|gb|EKX38795.1| hypothetical protein GUITHDRAFT_143982 [Guillardia theta CCMP2712]
Length = 299
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 56/138 (40%), Gaps = 40/138 (28%)
Query: 73 AYCWSG---ARANVGINGGKYCFGCKIVS--------------TQP--------VDMEDT 107
AYC G RA G++ G + F +IV T P V ++
Sbjct: 72 AYCLGGHRSVRATHGVSEGTWFFELEIVDYSSSVTSSNMQCSFTIPMWLCCMAEVLVDRG 131
Query: 108 PPDQQHVCRVGTSRG-------DDPVGKLGETEQSFGFGG-TGKFSHGGNFLNFGEKFGV 159
PPD H CRVG + D P+G S+ +G G H FG K+G
Sbjct: 132 PPDMCH-CRVGWAMDRVPWEDMDAPIGF------SYAYGSREGAAYHRSRGREFGSKYGN 184
Query: 160 GDTIICAIDLESKPLATI 177
GD I C I+L SKP + I
Sbjct: 185 GDVIGCLIELPSKPPSPI 202
>gi|195123091|ref|XP_002006043.1| GI18764 [Drosophila mojavensis]
gi|257096352|sp|B4KNC5.1|FBSP1_DROMO RecName: Full=F-box/SPRY domain-containing protein 1
gi|193911111|gb|EDW09978.1| GI18764 [Drosophila mojavensis]
Length = 252
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 30/156 (19%)
Query: 47 NPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMED 106
NP DC + I+ NG LH+ A ARA +G G++ + +++ P+
Sbjct: 81 NPNDCSRNVYIKPNGFT---LHRNPVAQSTDAARAKIGFRQGRHAW--EVIWEGPLGT-- 133
Query: 107 TPPDQQHVCRVGTSRGDDP------VGKLGETEQSFGFGGT-GKFSHGGN------FLNF 153
V +G S + V LG +QS+G+ H G+ LN
Sbjct: 134 -------VAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGNYPLLNN 186
Query: 154 GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
K+ VG+ I +D + T+ F KN ++LG A
Sbjct: 187 APKYQVGERIRVILDCDDN---TLSFEKNYEFLGVA 219
>gi|397614316|gb|EJK62724.1| hypothetical protein THAOC_16653 [Thalassiosira oceanica]
Length = 708
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 112 QHVCRV---------GTSRGDDPVGKLGETEQSFGFGGT-GKFSHG--GNFLNFGEKFGV 159
QHV RV T++ D G S+G+ G G HG N ++G KFG
Sbjct: 580 QHVRRVRHECVAVGLSTAQFRDQSNMPGWDGNSYGYHGDDGGIFHGLGENKKSYGPKFGP 639
Query: 160 GDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHI 219
GD + C +D S+ I F KNG++LG A FD V ER ++ ++P +
Sbjct: 640 GDNVGCGLDYASR---RIFFCKNGEFLGHA--FD-----------RVDERMIKAGLYPTV 683
Query: 220 LL 221
L
Sbjct: 684 GL 685
>gi|241238994|ref|XP_002401445.1| hypothetical protein IscW_ISCW018307 [Ixodes scapularis]
gi|215496167|gb|EEC05808.1| hypothetical protein IscW_ISCW018307 [Ixodes scapularis]
Length = 997
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
+G+T+ S+ + G + +GE + GD I C +DL+ T+ F +NG+ LG
Sbjct: 97 VGDTQDSYAYDGNRVRKWNVSTYKYGEPWLAGDVIGCCLDLDE---GTVHFYRNGRSLGV 153
Query: 189 AKQFDAGSNGLGVV 202
A FD G G+V
Sbjct: 154 A--FDRVRAGPGLV 165
>gi|156543951|ref|XP_001607299.1| PREDICTED: E3 ubiquitin-protein ligase RNF123-like [Nasonia
vitripennis]
Length = 1267
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 28/169 (16%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQS 135
+S RAN G+ GK+ + ++ S + + C+ G +G+ S
Sbjct: 99 FSTMRANTGVYRGKWMYEVQLGSKGVMQLGWGTAQ----CKFNQESG------VGDIVNS 148
Query: 136 FGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDAG 195
+ + G + +GE + GD I CAID+++ +I F +NGK LG A F+
Sbjct: 149 YAYDGNRVRKWNVSTHKYGEPWLSGDIIGCAIDMDN---GSISFYRNGKNLGVA--FERI 203
Query: 196 SNGLGVVDSAVKERQCESAVFPHILLKNVV-VVMQFSVEQGLIPVEGYK 243
+ G G++ FP + L + F P+EGY+
Sbjct: 204 TMGPGIL------------YFPTVSLAFTENITTNFGTTPMRYPIEGYQ 240
>gi|440797363|gb|ELR18451.1| SPRY domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 867
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 117 VGTSRGDDPVGKL-GETEQSFGFGGTG--KFSHGGNFLNFGEKFGVGDTIICAIDLESKP 173
VG + + P+ K G + S+G+ G + + G+ + FG +FG GDT+ C + E+
Sbjct: 136 VGLTDVNYPLNKQPGWVKHSYGYHGDDGMAYHNQGSGIPFGPRFGTGDTVGCGLIYET-- 193
Query: 174 LATIGFAKNGKWLG 187
+ F KNGK+LG
Sbjct: 194 -GEVFFTKNGKFLG 206
>gi|168703017|ref|ZP_02735294.1| polyA polymerase related protein [Gemmata obscuriglobus UQM 2246]
Length = 385
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEV ++ GLP SGK T WV +H R ++ ++ E PG N SE
Sbjct: 239 CEVTVLSGLPGSGKDT----WVAEHAGDREVISLDDIRRELDVDPG----DNQSEVVAAA 290
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKI 385
RA + R +F+ + TNV + R + + L + ++ VV+ +P +
Sbjct: 291 YDRAKGLL--------RRGESFVWNATNVSRVLRGKVIDLSIAYKARVKVVYLEPPIPLV 342
Query: 386 RS-----VKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDE 423
R VKR E E D ++ V + PG E
Sbjct: 343 RQRNTGRVKRVPERVWERLFDKLDVPTPTEAHEVERLVPGDVE 385
>gi|332030095|gb|EGI69920.1| E3 ubiquitin-protein ligase [Acromyrmex echinatior]
Length = 1311
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 40/176 (22%)
Query: 76 WSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGK---LGET 132
+S RAN G+ GK+ + ++ S + V +VG + +G+T
Sbjct: 141 FSTIRANTGVFKGKWMYEVQLGS-------------KGVMQVGWGTAQCKFNQQYGVGDT 187
Query: 133 EQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQF 192
S+ + G + +GE + GD I CA+D++ TI F +NG+ LG A F
Sbjct: 188 PNSYAYDGNRMRKWNVSTHKYGEAWLTGDIIGCALDMDD---GTIDFYRNGRSLGRA--F 242
Query: 193 DAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQFSVEQGLI----PVEGYKS 244
+ G G+ A FP + ++ + G I P+E YKS
Sbjct: 243 ENIPMGAGI------------AYFPTV---SLAFTENLTANFGSIPFRYPIEDYKS 283
>gi|405966788|gb|EKC32027.1| hypothetical protein CGI_10004788 [Crassostrea gigas]
Length = 388
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
+G+T+ S+ + G+ +GE + GD I CA+D ++ T+ F +NGK +G
Sbjct: 108 VGDTKDSYSYDGSRLRKWNIRTQKYGEAWLAGDVITCALDCDN---GTMTFYRNGKSMGE 164
Query: 189 AKQFDAGSNGLGVVDSAVKERQCESAVFPHI-LLKNVVVVMQFSVEQGLIPVEGYK 243
A F G G A FP + L +N + F P+EGY+
Sbjct: 165 A--FKNVKTGSGY------------AYFPAVSLSRNEHLRANFGATPLRYPIEGYE 206
>gi|223935741|ref|ZP_03627657.1| metal dependent phosphohydrolase [bacterium Ellin514]
gi|223895749|gb|EEF62194.1| metal dependent phosphohydrolase [bacterium Ellin514]
Length = 372
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 18/142 (12%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
C +M GLP SGK TW +K P ++ + I E + + N + Q
Sbjct: 229 CTATLMSGLPGSGKDTWLQKHKPGLP-----VVALDQIREDLDIDA---TENQGKVIQAA 280
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPKPEDLKI 385
R R+F + TN + RKR + LF ++ +V+ +P I
Sbjct: 281 REEVRGHL--------RAGRDFAFNATNTMQQTRKRWIDLFADYGARIEIVYIEPTISNI 332
Query: 386 RSVKRFKEMGKEVPADAVNNML 407
R +E + VP ++++L
Sbjct: 333 LERNRRRE--QRVPEKVIHHLL 352
>gi|332880051|ref|ZP_08447735.1| hypothetical protein HMPREF9074_03501 [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332682047|gb|EGJ54960.1| hypothetical protein HMPREF9074_03501 [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 303
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 27/152 (17%)
Query: 267 EVMMMVGLPASGKTTWA-------EKWVK-DHPEKRYILLGTNLILEQMKVPGLLRKHNY 318
+++++VG P SGK+T+A + WV+ + + R + G +L+ +P Y
Sbjct: 3 KLLILVGAPGSGKSTFARYFLRTEDNWVRVNRDDFRLMQFGDSLM-----IPF------Y 51
Query: 319 SERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFP 378
ER ++ + VL S T N +ID TN + + + + I+ VF
Sbjct: 52 EERISKMVDAS-----VLALLKSDT--NVLIDATNTSLRTIQDMVNAYTEYADISFKVFD 104
Query: 379 KP-EDLKIRSVKRFKEMGKEVPADAVNNMLAN 409
P E+L R KRF E GK +P + ++N
Sbjct: 105 VPVEELVKRCDKRFAETGKFIPKGVIEKNVSN 136
>gi|290998119|ref|XP_002681628.1| SPRY domain-containing protein [Naegleria gruberi]
gi|284095253|gb|EFC48884.1| SPRY domain-containing protein [Naegleria gruberi]
Length = 1368
Score = 39.7 bits (91), Expect = 3.0, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 7/124 (5%)
Query: 73 AYCWSGARANVGINGGKYCFGCKI---VSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKL 129
YC +A+ + G Y + KI VS + D + C +G D
Sbjct: 110 GYCM--IKASHCMESGSYYYEVKIEESVSCDTTKLPDYAKQSHYRCGWSMEQGFDKAC-C 166
Query: 130 GETEQSFGFGGT-GKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
G + SF +G + G H G +GEKFGVGD I C I++ I + L T
Sbjct: 167 GYDKYSFSYGSSDGNCFHKGKGSKYGEKFGVGDIIGCYIEIPDTSTPNIIYVDGSMSLKT 226
Query: 189 AKQF 192
+ F
Sbjct: 227 GEVF 230
>gi|256080932|ref|XP_002576729.1| SPRY domain containing protein [Schistosoma mansoni]
Length = 643
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 55/128 (42%), Gaps = 25/128 (19%)
Query: 76 WSGARANVGINGGK-YCFGCKIVSTQPVDMEDTPPDQQHVCRVGTS-------RGDDPVG 127
W G R N GI G + Y + +IV ED+ + R+G S G D G
Sbjct: 302 WQGFRVNKGIFGDRAYYYEVRIV-------EDS-----GLARIGWSFENGSLDLGVDRFG 349
Query: 128 -KLGETEQSFGFGGT-GKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKW 185
G FG G+ GK HG N+GE F D I C +DL + I ++KN +
Sbjct: 350 FGYGADRDGFGINGSQGKKLHGDIIENYGEAFRKDDVIGCFLDLGN---GIIQWSKNNRL 406
Query: 186 LGTAKQFD 193
G A + D
Sbjct: 407 FGPAYEID 414
>gi|325184714|emb|CCA19205.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 580
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 129 LGETEQSFGFGGTG--KFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWL 186
+G+ +S+ + G K++ G + L++GE++ GD I C IDL I + KNGK L
Sbjct: 365 VGDHVRSWAYDGCRVLKWTEGKD-LDYGEQWEAGDIIGCMIDLWK---GQISYTKNGKSL 420
Query: 187 GTAKQFDAGSNGLGVVDSAVKER--QCESAVFPHILLKNV-VVVMQFSVEQGLIPVEGYK 243
G A FD V +S+ ER SA ILL NV MQF + G ++G
Sbjct: 421 GVA--FD------NVNNSSSDERFFPAVSAEEKQILLMNVGGQPMQF-LPDGYSSLQGTA 471
Query: 244 SWVSALDDGNSV-LGPTFCNMKDCEVMMMVGLPASGKTTWAEK----WVKDHPEKRYILL 298
++DG+ + +M+D + + A AEK W K K L
Sbjct: 472 HVPKIVEDGSQCEVTAIKSDMQDRDRNT---IKAESPIEAAEKDRADWSKFTTAKDLEQL 528
Query: 299 GTNLILEQMKVPGLLRKHNYSERFQCLMGRANAIFDVL 336
G + E +K GL N +R L N +D +
Sbjct: 529 GLETLKEILKRRGLKCGGNLEQRAARLFSIKNKAWDEI 566
>gi|360045010|emb|CCD82558.1| SPRY domain containing protein [Schistosoma mansoni]
Length = 624
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 55/128 (42%), Gaps = 25/128 (19%)
Query: 76 WSGARANVGINGGK-YCFGCKIVSTQPVDMEDTPPDQQHVCRVGTS-------RGDDPVG 127
W G R N GI G + Y + +IV ED+ + R+G S G D G
Sbjct: 283 WQGFRVNKGIFGDRAYYYEVRIV-------EDS-----GLARIGWSFENGSLDLGVDRFG 330
Query: 128 -KLGETEQSFGFGGT-GKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKW 185
G FG G+ GK HG N+GE F D I C +DL + I ++KN +
Sbjct: 331 FGYGADRDGFGINGSQGKKLHGDIIENYGEAFRKDDVIGCFLDLGN---GIIQWSKNNRL 387
Query: 186 LGTAKQFD 193
G A + D
Sbjct: 388 FGPAYEID 395
>gi|395847563|ref|XP_003796438.1| PREDICTED: SPRY domain-containing SOCS box protein 2 [Otolemur
garnettii]
Length = 338
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 33/165 (20%)
Query: 41 KQRVVLNPADCDLDFDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQ 100
++R NP DC + ++++ GL + A GAR G G + +
Sbjct: 118 QRRHGWNPKDCSENIEVKEGGLY---FERRPVAQSTDGARGKRGYTRGLHVWEISW---- 170
Query: 101 PVDMEDTPPDQ---QHVCRVGTS----RGDDPVGKLGETEQSFGFG-GTGKFSH---GGN 149
PP+Q V V T+ + D LG +S+G+ G GK H G
Sbjct: 171 -------PPEQRGTHAVVGVATALAPLQADHYAALLGSNSESWGWDIGRGKLYHQNKGPG 223
Query: 150 FLNF-----GEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
+ GE+ V +T++ +D+E T+G+A G +LG A
Sbjct: 224 APQYPVGPQGEQLDVPETLLVILDMEE---GTLGYATGGTYLGPA 265
>gi|172088046|ref|NP_001116480.1| SPRY domain-containing SOCS box protein 3 [Danio rerio]
gi|169642383|gb|AAI60600.1| LOC559863 protein [Danio rerio]
Length = 358
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LG+ E S+G TG H G+ ++F +FG G I +D T+ F KN K +G
Sbjct: 186 LGKDEDSWGLSYTGLLHHNGDKVSFSSRFGQGSIIGVHLDTWH---GTLTFYKNRKCIGV 242
Query: 189 A 189
A
Sbjct: 243 A 243
>gi|327291838|ref|XP_003230627.1| PREDICTED: SPRY domain-containing SOCS box protein 3-like, partial
[Anolis carolinensis]
Length = 313
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LG+ E S+G TG H G+ NF +FG G I +D T+ F KN K +G
Sbjct: 144 LGKDEDSWGLSYTGLLHHKGDRTNFSTRFGQGSIIGVHLDTWH---GTLTFFKNRKCIGV 200
Query: 189 A 189
A
Sbjct: 201 A 201
>gi|118098230|ref|XP_414716.2| PREDICTED: SPRY domain-containing SOCS box protein 3 [Gallus
gallus]
Length = 355
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LG+ E S+G TG H G+ NF +FG G I +D T+ F KN K +G
Sbjct: 187 LGKDEDSWGLSYTGLLHHKGDKTNFSSRFGQGSIIGVHLDTWH---GTLTFFKNRKCIGV 243
Query: 189 A 189
A
Sbjct: 244 A 244
>gi|326929358|ref|XP_003210833.1| PREDICTED: SPRY domain-containing SOCS box protein 3-like
[Meleagris gallopavo]
Length = 355
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LG+ E S+G TG H G+ NF +FG G I +D T+ F KN K +G
Sbjct: 187 LGKDEDSWGLSYTGLLHHKGDKTNFSSRFGQGSIIGVHLDTWH---GTLTFFKNRKCIGV 243
Query: 189 A 189
A
Sbjct: 244 A 244
>gi|195377870|ref|XP_002047710.1| Dead-box-1 [Drosophila virilis]
gi|194154868|gb|EDW70052.1| Dead-box-1 [Drosophila virilis]
Length = 732
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 32/156 (20%)
Query: 76 WSGARANVGING-GKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGTSRGDDPVGKLGETEQ 134
W G RA G+ G K+ + E T D+ +CRVG S + LG
Sbjct: 122 WHGCRATTGVYGKAKFYY------------EATVTDEG-LCRVGWSTQMANL-DLGTCRY 167
Query: 135 SFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
FGFGGTGK S+ F ++G+ FG D + C +DL+ + F KNG LG A +
Sbjct: 168 GFGFGGTGKKSNNRQFDDYGDAFGKADVVGCMLDLQR---LEVSFTKNGTSLGVAFK--- 221
Query: 195 GSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
+ E +P ++LKN ++ F
Sbjct: 222 -----------IPENLRNDTFYPAVVLKNAEMLFNF 246
>gi|224069625|ref|XP_002191784.1| PREDICTED: SPRY domain-containing SOCS box protein 3 [Taeniopygia
guttata]
Length = 351
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 129 LGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGT 188
LG+ E S+G TG H G+ NF +FG G I +D T+ F KN K +G
Sbjct: 182 LGKDEDSWGLSYTGLLHHKGDKTNFSSRFGQGSIIGVHLDTWH---GTLTFFKNRKCIGV 238
Query: 189 A 189
A
Sbjct: 239 A 239
>gi|395508970|ref|XP_003758780.1| PREDICTED: ATP-dependent RNA helicase DDX1 [Sarcophilus harrisii]
Length = 769
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 142 GKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTAKQFDA 194
GK SH F N+GE+F + DTI C +D++ + F+KNGK LG A + A
Sbjct: 215 GKKSHNKQFDNYGEEFTMHDTIGCYLDIDK---GQVKFSKNGKDLGLAFEIPA 264
>gi|357631659|gb|EHJ79128.1| hypothetical protein KGM_15589 [Danaus plexippus]
Length = 726
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 34/171 (19%)
Query: 60 NGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHVCRVGT 119
+GL+ H W G RA GI+ T+ V + + +CRVG
Sbjct: 103 DGLRCQSRHFNA----WHGCRATKGIH------------TKGVYYYEATVTDEGLCRVGW 146
Query: 120 SRGDDPVGKLGETEQSFGFGGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGF 179
S + LG FGFGGTGK S+ F ++GE +G D I C ++L + I F
Sbjct: 147 SAPGANL-DLGTDRLGFGFGGTGKKSNCKQFDDYGEAYGKNDVIGCLLNLNN---GDIRF 202
Query: 180 AKNGKWLGTAKQFDAGSNGLGVVDSAVKERQCESAVFPHILLKNVVVVMQF 230
KNG+ LG A + D FP ++LKN + F
Sbjct: 203 YKNGQDLGLAFKLDQSRRS--------------DCYFPAVVLKNAEISFNF 239
>gi|150400923|ref|YP_001324689.1| chromatin associated protein KTI12 [Methanococcus aeolicus
Nankai-3]
gi|150013626|gb|ABR56077.1| Chromatin associated protein KTI12 [Methanococcus aeolicus
Nankai-3]
Length = 255
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 24/163 (14%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEK--RYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++ GLP +GK+T+++K K EK I+LGT+LI EQ P +S +
Sbjct: 2 LIILTGLPGTGKSTFSKKLSKKLWEKGIDNIILGTDLIREQF--PQ------WSNEQEEF 53
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK-PEDLK 384
+ + D L+ A + I+D TN + S R+ + + K ++++ K P D
Sbjct: 54 IKNST---DYLIKNALK-DYTVIVDDTNYYNSKRRDLINIAKENNKNHIMIYLKAPLD-- 107
Query: 385 IRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
+KR + G ++P + + +M + D PG+ +D+
Sbjct: 108 -TILKRNIQRGAKIPNEVIIDMFNKF------DEPGTKYSWDK 143
>gi|391348415|ref|XP_003748443.1| PREDICTED: ryanodine receptor 44F-like [Metaseiulus occidentalis]
Length = 5162
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 125 PVGKLGETEQSFGFGGT-GKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNG 183
P +LG E SF + G G + G +G ++ VGD I C +DL K TI F+ NG
Sbjct: 1127 PSCELGGDENSFAYDGLLGLKNSAGGSEAYGRQWAVGDVIGCMLDLHDK---TISFSLNG 1183
Query: 184 KWL 186
+ L
Sbjct: 1184 ELL 1186
>gi|213962538|ref|ZP_03390800.1| polynucleotide kinase [Capnocytophaga sputigena Capno]
gi|213954864|gb|EEB66184.1| polynucleotide kinase [Capnocytophaga sputigena Capno]
Length = 303
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 267 EVMMMVGLPASGKTTWA-------EKWVK-DHPEKRYILLGTNLILEQMKVPGLLRKHNY 318
+++++VG P SGK+T+A + W++ + + R + G +L+ +P Y
Sbjct: 3 KLLILVGAPGSGKSTFARYFLRTEDNWIRVNRDDFRLMQFGDSLM-----IPF------Y 51
Query: 319 SERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFP 378
ER ++ + VL S T N IID TN + + + + I+ VF
Sbjct: 52 EERISKMVEAS-----VLTLLKSDT--NVIIDATNTSLRTIQDMIHTYTEYADISFKVFD 104
Query: 379 KPED-LKIRSVKRFKEMGKEVPADAVNNMLAN 409
P D L R KR++E GK + V +AN
Sbjct: 105 LPVDELVKRCDKRYEETGKFISKSVVERNVAN 136
>gi|429752025|ref|ZP_19284912.1| hypothetical protein HMPREF9073_00871 [Capnocytophaga sp. oral
taxon 326 str. F0382]
gi|429178209|gb|EKY19492.1| hypothetical protein HMPREF9073_00871 [Capnocytophaga sp. oral
taxon 326 str. F0382]
Length = 303
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 267 EVMMMVGLPASGKTTWA-------EKWVK-DHPEKRYILLGTNLILEQMKVPGLLRKHNY 318
+++++VG P SGK+T+A + W++ + + R + G +L+ +P Y
Sbjct: 3 KLLILVGAPGSGKSTFARYFLRTEDNWIRVNRDDFRLMQFGDSLM-----IPF------Y 51
Query: 319 SERFQCLMGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFP 378
ER ++ + VL S T N IID TN + + + + I+ VF
Sbjct: 52 EERISKMVEAS-----VLTLLKSDT--NVIIDATNTSLRTIEDMIHTYTEYADISFKVFD 104
Query: 379 KPED-LKIRSVKRFKEMGKEVPADAVNNMLAN 409
P D L R KR++E GK + V +AN
Sbjct: 105 LPVDELVKRCDKRYEETGKFISKSVVERNVAN 136
>gi|308452018|ref|XP_003088886.1| hypothetical protein CRE_20629 [Caenorhabditis remanei]
gi|308244519|gb|EFO88471.1| hypothetical protein CRE_20629 [Caenorhabditis remanei]
Length = 158
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 263 MKDCEVMMMVG--LPASGKTTWAEKWVK-DHPEKRYILLGTNLILEQMKVPGLLRKHNYS 319
MKDC V+ + G L T++ +KW D+P +Y+ +G++ + + KV GL HN+S
Sbjct: 54 MKDCVVIQLRGSTLTDQDVTSFLDKWKSGDYPNLQYLYIGSDNLSQDFKVFGLPTLHNFS 113
>gi|422935183|ref|YP_007005140.1| putative poly A polymerase [Campylobacter phage CP21]
gi|399498191|emb|CCH63532.1| putative poly A polymerase [Campylobacter phage CP21]
Length = 340
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 22/154 (14%)
Query: 270 MMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHN---YSERFQCLM 326
++VGLP SGK+T+ K + IL+ +K+N YS+ ++ L
Sbjct: 185 VLVGLPGSGKSTYVYMNDKAAISRDDILMRYGF-----------KKYNQVEYSDIWRNLT 233
Query: 327 G----RANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKL---RLFVNFRKIAVVVFPK 379
+++F+ RA + +N +ID+TN +R+R L N+ K A VVF
Sbjct: 234 DSDQKEIDSLFNDKFLRALQKNQNILIDKTNTSIKSRRRLFATSSLVRNYHKKA-VVFLT 292
Query: 380 PEDLKIRSVKRFKEMGKEVPADAVNNMLANYVLP 413
P + + +++ GK + V+ M+ ++ +P
Sbjct: 293 PYTMILNRLEKRNATGKIINKSVVDAMMKSFAIP 326
>gi|333381654|ref|ZP_08473333.1| hypothetical protein HMPREF9455_01499 [Dysgonomonas gadei ATCC
BAA-286]
gi|332829583|gb|EGK02229.1| hypothetical protein HMPREF9455_01499 [Dysgonomonas gadei ATCC
BAA-286]
Length = 369
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
CEV ++ GLP GK + + D P + + + RK+ YS +
Sbjct: 225 CEVTILSGLPGMGKDHYIQSLKPDIP--------------VISLDAIRRKYKYSPTDRSA 270
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLK 384
GR R ++F+ + TN+ + R++ + LF + K+ +V KP ++
Sbjct: 271 TGRVVQEAKEQARVYLRKKQDFVWNATNITRLMRQQLVDLFTLYGAKVRIVYVEKPYEV- 329
Query: 385 IRSVKRFKEMGKEVPADAVNNMLANYVLP 413
RS R +E ++P + ++ ML +P
Sbjct: 330 WRSQNRNREF--QLPENVLDKMLLKLEIP 356
>gi|256811473|ref|YP_003128842.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus fervens AG86]
gi|256794673|gb|ACV25342.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus fervens AG86]
Length = 248
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRY--ILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
++++ GLP +GK+T+++ K + I+LG++LI E + + E+++
Sbjct: 2 LIILTGLPGAGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPI--------WKEKYEEF 53
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRK-IAVVVFPKPEDLK 384
+ +A L+ A + I+D TN + S R+ + + + K A++ P D+
Sbjct: 54 IRKATY---SLIDNALKDYW-VIVDDTNYYNSMRRDLINIAKKYNKNYAIIYLKAPLDVL 109
Query: 385 I-RSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
I R++ R G+++P + + M + D PG +D+
Sbjct: 110 IERNIMR----GEKIPNEVIKKMYEKF------DEPGKKYKWDE 143
>gi|255717625|ref|XP_002555093.1| KLTH0G01210p [Lachancea thermotolerans]
gi|238936477|emb|CAR24656.1| KLTH0G01210p [Lachancea thermotolerans CBS 6340]
Length = 823
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 135 SFGF-GGTGKFSHGGNFLNFGEKFGVGDTIICAIDLESKPLATIGFAKNGKWLGTA 189
SFG+ G G + G + +G+++G GD I C ++ TI F KNG LGTA
Sbjct: 406 SFGYCGQDGYITDGTQYKIYGKQYGRGDVIGCGVNFVD---GTIFFTKNGINLGTA 458
>gi|289192229|ref|YP_003458170.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus sp. FS406-22]
gi|288938679|gb|ADC69434.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus sp. FS406-22]
Length = 248
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 30/166 (18%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRY----ILLGTNLILEQMKVPGLLRKHNYSERFQ 323
++++ GLP GK+T+++ K RY I+LG++LI E + + E ++
Sbjct: 2 LIILTGLPGVGKSTFSKNLAKILS--RYNIDIIVLGSDLIRESFPI--------WKETYE 51
Query: 324 CLMGRAN-AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRK-IAVVVFPKPE 381
+ +A+ + D L I+D TN + S R+ + + + K A++ P
Sbjct: 52 EFIRKASYGLIDSALKHYW-----VIVDDTNYYNSMRRDLINIAKKYNKNYAIIYLKAPL 106
Query: 382 DLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDELFDQ 427
++ +KR E G+++P D + M + D PG +D+
Sbjct: 107 EV---LIKRNIERGEKIPNDVIKKMYEKF------DEPGRKYKWDK 143
>gi|186686122|ref|YP_001869318.1| hypothetical protein Npun_R6086 [Nostoc punctiforme PCC 73102]
gi|186468574|gb|ACC84375.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
Length = 169
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 26/147 (17%)
Query: 267 EVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQ------MKVPGLLRKHNYSE 320
++++++GLP SGK+T+A+K + + P+ L+ T+ I Q ++ P +L H
Sbjct: 3 KLILLIGLPGSGKSTFAKKLLVECPQMS--LISTDAIRGQLFGSQALQGPWVLIWHEIER 60
Query: 321 RFQCLMGRAN-AIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK 379
+FQ + + N AIFD + A R R +I A R L FR+I +
Sbjct: 61 QFQQAISKTNTAIFDA--TNAQRRHRREVI--------AVARNL----GFRQITAIWVDT 106
Query: 380 PEDLKIRSVKRFKEMGKEVPADAVNNM 406
P L + K+ ++VP + + M
Sbjct: 107 PVWL---CLAWNKKRSRQVPEEIILRM 130
>gi|254459115|ref|ZP_05072538.1| hypothetical protein CBGD1_1755 [Sulfurimonas gotlandica GD1]
gi|207084386|gb|EDZ61675.1| hypothetical protein CBGD1_1755 [Sulfurimonas gotlandica GD1]
Length = 361
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQM-KVPGLLRKHNYSERFQCLM 326
+ ++VG P S K++W + K +I++ + E++ K G KH+Y E + +
Sbjct: 199 LYILVGPPCSRKSSWVNR-----KSKEFIIINRDSCDEEIGKKYG---KHSYDEAYDFVK 250
Query: 327 ------GRANAIFDVLLSRASRTP-RNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK 379
A+ ++ A + +N IID N+ S RK+ + F++ I V+VF
Sbjct: 251 ENPDVEKEADELYKAKREFAKNSKNKNIIIDNPNLMLSNRKKWITPFLDTHTIKVIVFLD 310
Query: 380 P-EDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDEL 424
E++ S KR E+ K + + + L + P+ + G DE+
Sbjct: 311 SLENIVKCSKKRSIEINKYIDEKLIISKLKTFYFPLY--SEGIDEI 354
>gi|373868420|ref|ZP_09604818.1| hypothetical protein SMGD1_2202 [Sulfurimonas gotlandica GD1]
gi|372470521|gb|EHP30725.1| hypothetical protein SMGD1_2202 [Sulfurimonas gotlandica GD1]
Length = 319
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 268 VMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQM-KVPGLLRKHNYSERFQCLM 326
+ ++VG P S K++W + K +I++ + E++ K G KH+Y E + +
Sbjct: 157 LYILVGPPCSRKSSWVNR-----KSKEFIIINRDSCDEEIGKKYG---KHSYDEAYDFVK 208
Query: 327 ------GRANAIFDVLLSRASRTP-RNFIIDQTNVFKSARKRKLRLFVNFRKIAVVVFPK 379
A+ ++ A + +N IID N+ S RK+ + F++ I V+VF
Sbjct: 209 ENPDVEKEADELYKAKREFAKNSKNKNIIIDNPNLMLSNRKKWITPFLDTHTIKVIVFLD 268
Query: 380 P-EDLKIRSVKRFKEMGKEVPADAVNNMLANYVLPVNKDTPGSDEL 424
E++ S KR E+ K + + + L + P+ + G DE+
Sbjct: 269 SLENIVKCSKKRSIEINKYIDEKLIISKLKTFYFPLY--SEGIDEI 312
>gi|291335253|gb|ADD94873.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S09-C145]
Length = 396
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 19/154 (12%)
Query: 55 FDIEDNGLKSSGLHQEGFAYCWSGARANVGINGGKYCFGCKIVSTQPVDMEDTPPDQQHV 114
+++E LK++G H G W +G GKY F K+ Q D +
Sbjct: 190 WNLEYGNLKTNG-HASGAGNAWRSVYGTLGALSGKYYFEMKVDRVQGSDPNN-------- 240
Query: 115 CRVGT-----SRGDDPVGKLGETEQSFGFGGT-GKFSHGGNFLNFGEKFGVGDTIICAID 168
RVG R + + +++G+ T G + GN +FG + D I A+D
Sbjct: 241 IRVGIIDPEQMRQEADNASFTDKTRAYGYQATNGNMVNAGNNTSFGATYTTNDIIGVAMD 300
Query: 169 LESKPLATIGFAKNGKWLGTAKQFDAGSNGLGVV 202
L + L F+KNG + + +GS G G V
Sbjct: 301 LTNSKLY---FSKNGTFQNSGVP-TSGSTGTGAV 330
>gi|60682197|ref|YP_212341.1| hypothetical protein BF2724 [Bacteroides fragilis NCTC 9343]
gi|60493631|emb|CAH08420.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
Length = 370
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 22/151 (14%)
Query: 266 CEVMMMVGLPASGKTTWAEKWVKDHPEKRYILLGTNLILEQMKVPGLLRKHNYSERFQCL 325
C V ++VGLP GK + E D P + + + RKH +S +
Sbjct: 225 CGVTLLVGLPGMGKDYYIESRCADMP--------------VVSLDAIRRKHKFSPTDKAA 270
Query: 326 MGRANAIFDVLLSRASRTPRNFIIDQTNVFKSARKRKLRLFVNF-RKIAVVVFPKPEDLK 384
G R ++FI + TNV + R + + LF+ + ++ +V KP +
Sbjct: 271 NGWVAQTAKEQARIYLRKGQDFIWNATNVSRQRRTQLIDLFITYGARVKIVYIEKPYSVW 330
Query: 385 IR--SVKRFKEMGKEVPADAVNNMLANYVLP 413
R S + + EVP ++ ML +P
Sbjct: 331 RRQNSTREY-----EVPETVLDKMLGRLEVP 356
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,365,744,477
Number of Sequences: 23463169
Number of extensions: 331432716
Number of successful extensions: 688013
Number of sequences better than 100.0: 728
Number of HSP's better than 100.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 686063
Number of HSP's gapped (non-prelim): 845
length of query: 435
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 290
effective length of database: 8,957,035,862
effective search space: 2597540399980
effective search space used: 2597540399980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)