Query 013832
Match_columns 435
No_of_seqs 403 out of 2894
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 17:56:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013832.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013832hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 1.2E-31 4.1E-36 264.2 25.3 253 153-432 13-265 (323)
2 2v8q_E 5'-AMP-activated protei 100.0 1.1E-27 3.7E-32 236.7 21.0 245 157-430 22-266 (330)
3 2qrd_G Protein C1556.08C; AMPK 100.0 2.2E-26 7.6E-31 227.5 26.5 250 154-431 6-259 (334)
4 1z0n_A 5'-AMP-activated protei 99.9 4.8E-24 1.6E-28 173.3 11.5 88 21-112 6-93 (96)
5 3kh5_A Protein MJ1225; AMPK, A 99.9 3.8E-23 1.3E-27 198.3 16.7 202 171-412 4-205 (280)
6 2qlv_B Protein SIP2, protein S 99.9 8.2E-24 2.8E-28 200.5 11.5 90 24-113 2-91 (252)
7 3ddj_A CBS domain-containing p 99.9 2.1E-23 7.1E-28 202.7 14.2 195 169-413 92-286 (296)
8 3kh5_A Protein MJ1225; AMPK, A 99.9 3.2E-22 1.1E-26 191.8 17.4 193 169-410 83-279 (280)
9 3ddj_A CBS domain-containing p 99.9 1.3E-22 4.6E-27 196.9 12.4 195 169-411 19-213 (296)
10 3t4n_C Nuclear protein SNF4; C 99.9 3.6E-21 1.2E-25 189.1 20.3 196 179-412 121-320 (323)
11 3nme_A Ptpkis1 protein, SEX4 g 99.9 4.9E-22 1.7E-26 193.8 10.5 87 22-109 166-254 (294)
12 2yzq_A Putative uncharacterize 99.9 3.4E-21 1.1E-25 185.3 14.2 204 169-411 59-278 (282)
13 2v8q_E 5'-AMP-activated protei 99.8 1.6E-20 5.5E-25 185.2 17.4 202 174-413 122-324 (330)
14 2qrd_G Protein C1556.08C; AMPK 99.8 4.1E-20 1.4E-24 182.4 20.1 201 175-413 112-316 (334)
15 2yzq_A Putative uncharacterize 99.8 4E-20 1.4E-24 177.7 11.7 177 171-407 2-179 (282)
16 4esy_A CBS domain containing m 99.7 1.9E-18 6.5E-23 154.4 8.7 157 157-328 5-162 (170)
17 3l2b_A Probable manganase-depe 99.7 1.9E-16 6.6E-21 149.7 17.1 212 169-411 6-243 (245)
18 4esy_A CBS domain containing m 99.7 1.9E-17 6.4E-22 147.9 9.4 128 269-410 23-160 (170)
19 3k6e_A CBS domain protein; str 99.7 1E-16 3.4E-21 141.7 10.8 120 271-413 24-143 (156)
20 3kpb_A Uncharacterized protein 99.7 2.8E-16 9.5E-21 131.7 12.2 114 270-412 7-120 (122)
21 3lhh_A CBS domain protein; str 99.7 3.9E-16 1.3E-20 139.8 13.7 119 269-415 47-167 (172)
22 3lv9_A Putative transporter; C 99.7 6.4E-16 2.2E-20 134.4 14.3 116 269-412 28-145 (148)
23 3i8n_A Uncharacterized protein 99.7 2.7E-16 9.2E-21 133.9 11.5 116 269-411 11-128 (130)
24 3lfr_A Putative metal ION tran 99.7 1.3E-16 4.4E-21 137.2 8.8 118 272-415 13-130 (136)
25 3hf7_A Uncharacterized CBS-dom 99.7 3.9E-16 1.3E-20 133.1 11.1 116 272-412 12-127 (130)
26 3nqr_A Magnesium and cobalt ef 99.7 1.7E-16 5.9E-21 134.5 8.7 115 270-411 9-125 (127)
27 3jtf_A Magnesium and cobalt ef 99.7 4E-16 1.4E-20 132.7 10.4 112 272-412 15-126 (129)
28 1pbj_A Hypothetical protein; s 99.6 1.5E-15 5.1E-20 127.6 13.6 119 270-415 7-125 (125)
29 3oco_A Hemolysin-like protein 99.6 4.7E-16 1.6E-20 136.2 10.8 120 270-417 26-148 (153)
30 3i8n_A Uncharacterized protein 99.6 7.6E-16 2.6E-20 131.0 11.8 126 167-327 3-128 (130)
31 3gby_A Uncharacterized protein 99.6 3.8E-16 1.3E-20 132.4 9.9 117 269-412 10-126 (128)
32 2ef7_A Hypothetical protein ST 99.6 2E-15 6.9E-20 128.5 13.8 118 269-413 9-126 (133)
33 3lv9_A Putative transporter; C 99.6 2.1E-15 7.3E-20 131.0 13.7 127 167-329 20-146 (148)
34 3k6e_A CBS domain protein; str 99.6 7.9E-16 2.7E-20 135.9 10.8 136 163-330 9-144 (156)
35 3hf7_A Uncharacterized CBS-dom 99.6 9E-16 3.1E-20 130.9 10.2 126 170-328 2-127 (130)
36 3lqn_A CBS domain protein; csg 99.6 3.3E-15 1.1E-19 130.0 13.7 121 272-414 25-145 (150)
37 2rih_A Conserved protein with 99.6 2.9E-15 9.9E-20 129.0 13.3 118 269-411 10-127 (141)
38 3fhm_A Uncharacterized protein 99.6 4.5E-15 1.5E-19 131.6 14.5 117 272-413 35-151 (165)
39 2o16_A Acetoin utilization pro 99.6 3E-15 1E-19 132.2 13.1 125 269-412 10-135 (160)
40 2nyc_A Nuclear protein SNF4; b 99.6 3.4E-15 1.2E-19 128.4 12.8 126 269-412 16-141 (144)
41 2yzi_A Hypothetical protein PH 99.6 4.5E-15 1.5E-19 127.1 13.2 123 269-417 12-134 (138)
42 3fv6_A YQZB protein; CBS domai 99.6 4E-15 1.4E-19 131.1 12.8 118 269-412 22-144 (159)
43 1o50_A CBS domain-containing p 99.6 7.7E-15 2.6E-19 128.9 14.2 125 269-413 21-154 (157)
44 3ocm_A Putative membrane prote 99.6 4.8E-15 1.6E-19 133.1 13.0 121 269-418 41-163 (173)
45 2p9m_A Hypothetical protein MJ 99.6 3.4E-15 1.2E-19 127.7 11.4 118 269-412 13-136 (138)
46 3kxr_A Magnesium transporter, 99.6 1.5E-14 5.1E-19 133.6 16.1 123 261-414 51-176 (205)
47 3lqn_A CBS domain protein; csg 99.6 4.6E-15 1.6E-19 129.0 11.9 138 164-331 9-146 (150)
48 2rc3_A CBS domain; in SITU pro 99.6 6.9E-15 2.4E-19 125.5 12.7 115 272-412 17-131 (135)
49 2uv4_A 5'-AMP-activated protei 99.6 7.5E-15 2.6E-19 128.3 13.0 122 272-411 29-150 (152)
50 3oi8_A Uncharacterized protein 99.6 2.2E-15 7.6E-20 132.5 9.7 111 269-407 43-155 (156)
51 3lhh_A CBS domain protein; str 99.6 6.5E-15 2.2E-19 131.7 12.7 127 167-329 39-165 (172)
52 3oco_A Hemolysin-like protein 99.6 3E-15 1E-19 131.1 9.9 127 167-329 17-144 (153)
53 3nqr_A Magnesium and cobalt ef 99.6 1.8E-15 6.3E-20 128.1 8.3 124 169-327 2-125 (127)
54 1pvm_A Conserved hypothetical 99.6 5.9E-15 2E-19 133.3 11.7 120 269-412 14-133 (184)
55 3k2v_A Putative D-arabinose 5- 99.6 7.3E-15 2.5E-19 127.9 11.9 114 269-408 33-148 (149)
56 4gqw_A CBS domain-containing p 99.6 1.1E-15 3.7E-20 132.6 6.3 124 269-412 10-143 (152)
57 1vr9_A CBS domain protein/ACT 99.6 3.1E-15 1.1E-19 138.8 9.9 161 171-395 14-174 (213)
58 1y5h_A Hypothetical protein RV 99.6 2.4E-15 8.2E-20 128.0 8.4 116 270-411 14-130 (133)
59 3jtf_A Magnesium and cobalt ef 99.6 2.5E-15 8.7E-20 127.7 8.2 124 168-328 3-126 (129)
60 4fry_A Putative signal-transdu 99.6 1.4E-14 4.9E-19 127.0 13.0 119 272-416 21-139 (157)
61 3sl7_A CBS domain-containing p 99.6 6.3E-15 2.2E-19 131.7 10.4 126 270-413 10-157 (180)
62 3ctu_A CBS domain protein; str 99.6 6.1E-15 2.1E-19 129.2 10.0 121 270-413 21-143 (156)
63 3ocm_A Putative membrane prote 99.6 1.8E-14 6.3E-19 129.3 12.7 127 167-330 33-159 (173)
64 2emq_A Hypothetical conserved 99.6 2E-14 7E-19 125.7 12.6 123 269-413 16-140 (157)
65 2ef7_A Hypothetical protein ST 99.6 2.6E-14 8.8E-19 121.5 12.9 128 167-331 1-128 (133)
66 3ctu_A CBS domain protein; str 99.6 1.6E-14 5.6E-19 126.5 11.9 136 166-332 11-146 (156)
67 2pfi_A Chloride channel protei 99.6 1.8E-14 6.2E-19 126.7 12.2 129 270-413 19-148 (164)
68 3fv6_A YQZB protein; CBS domai 99.6 2E-14 6.8E-19 126.6 12.3 140 160-332 7-148 (159)
69 3lfr_A Putative metal ION tran 99.6 2E-15 7E-20 129.6 5.4 126 169-328 2-127 (136)
70 2d4z_A Chloride channel protei 99.6 4.4E-14 1.5E-18 134.3 14.9 139 269-412 18-246 (250)
71 3kpb_A Uncharacterized protein 99.6 1.8E-14 6.2E-19 120.5 10.6 119 171-328 2-120 (122)
72 3fhm_A Uncharacterized protein 99.5 1.4E-14 4.7E-19 128.4 10.3 130 167-329 21-151 (165)
73 4aee_A Alpha amylase, catalyti 99.5 4.7E-15 1.6E-19 160.8 8.7 81 22-105 14-102 (696)
74 1yav_A Hypothetical protein BS 99.5 1.5E-14 5.2E-19 127.2 9.9 122 270-413 20-143 (159)
75 1pbj_A Hypothetical protein; s 99.5 7.9E-14 2.7E-18 116.9 13.8 121 171-328 2-122 (125)
76 1vr9_A CBS domain protein/ACT 99.5 2.4E-14 8.4E-19 132.7 11.7 113 269-412 18-130 (213)
77 3gby_A Uncharacterized protein 99.5 1.7E-14 5.9E-19 122.1 9.3 123 169-328 4-126 (128)
78 4gqw_A CBS domain-containing p 99.5 1.2E-14 4.2E-19 125.9 8.6 142 168-329 3-144 (152)
79 2j9l_A Chloride channel protei 99.5 5.4E-14 1.8E-18 126.3 13.0 135 274-413 25-166 (185)
80 2p9m_A Hypothetical protein MJ 99.5 4.2E-14 1.4E-18 120.9 11.1 129 164-328 2-136 (138)
81 2o16_A Acetoin utilization pro 99.5 1.5E-13 5.2E-18 121.2 14.9 134 169-330 4-137 (160)
82 2d4z_A Chloride channel protei 99.5 1.7E-13 5.8E-18 130.3 16.2 150 168-328 11-246 (250)
83 2uv4_A 5'-AMP-activated protei 99.5 8.3E-14 2.8E-18 121.6 11.8 136 162-327 15-150 (152)
84 3sl7_A CBS domain-containing p 99.5 2.8E-14 9.7E-19 127.4 9.0 152 170-332 4-160 (180)
85 2rih_A Conserved protein with 99.5 1.5E-13 5.2E-18 118.1 13.2 122 170-328 5-128 (141)
86 2emq_A Hypothetical conserved 99.5 1.1E-13 3.7E-18 121.1 12.4 136 166-331 7-142 (157)
87 2yvy_A MGTE, Mg2+ transporter 99.5 1.5E-13 5.1E-18 132.6 14.3 120 264-414 135-259 (278)
88 3k2v_A Putative D-arabinose 5- 99.5 7.9E-14 2.7E-18 121.3 11.0 121 170-324 28-148 (149)
89 2j9l_A Chloride channel protei 99.5 1E-13 3.6E-18 124.4 12.1 158 165-331 6-168 (185)
90 3oi8_A Uncharacterized protein 99.5 4.1E-14 1.4E-18 124.4 8.6 121 167-323 35-155 (156)
91 1o50_A CBS domain-containing p 99.5 3.1E-13 1.1E-17 118.6 14.1 134 168-329 14-154 (157)
92 1yav_A Hypothetical protein BS 99.5 1.2E-13 4.2E-18 121.3 11.5 135 167-331 11-145 (159)
93 4fry_A Putative signal-transdu 99.5 1.3E-13 4.5E-18 120.7 11.5 126 171-330 8-137 (157)
94 2yzi_A Hypothetical protein PH 99.5 1.5E-13 5.1E-18 117.5 11.3 129 166-330 3-131 (138)
95 2rc3_A CBS domain; in SITU pro 99.5 1.2E-13 4.2E-18 117.7 10.7 125 171-329 7-132 (135)
96 1y5h_A Hypothetical protein RV 99.5 4E-14 1.4E-18 120.3 7.5 125 167-327 5-130 (133)
97 2pfi_A Chloride channel protei 99.5 1.5E-13 5.1E-18 120.8 11.2 137 168-330 11-149 (164)
98 2nyc_A Nuclear protein SNF4; b 99.5 3.9E-13 1.3E-17 115.4 13.4 132 169-328 7-141 (144)
99 2oux_A Magnesium transporter; 99.5 1.7E-13 5.9E-18 132.9 11.0 117 267-414 140-261 (286)
100 2zy9_A Mg2+ transporter MGTE; 99.4 9.8E-13 3.3E-17 136.3 14.6 122 261-413 152-278 (473)
101 3kxr_A Magnesium transporter, 99.4 1.3E-12 4.4E-17 120.6 13.6 131 159-330 41-176 (205)
102 1pvm_A Conserved hypothetical 99.4 5.4E-13 1.9E-17 120.3 10.1 125 170-328 9-133 (184)
103 3pc3_A CG1753, isoform A; CBS, 99.4 1.7E-12 5.7E-17 136.4 11.7 120 269-414 389-513 (527)
104 3org_A CMCLC; transporter, tra 99.3 7.4E-13 2.5E-17 142.0 4.7 134 269-409 458-622 (632)
105 3usb_A Inosine-5'-monophosphat 99.3 1.5E-11 5.1E-16 128.4 13.0 115 270-412 119-234 (511)
106 2oux_A Magnesium transporter; 99.3 1.2E-11 4.2E-16 119.7 11.5 130 160-330 125-261 (286)
107 3pc3_A CG1753, isoform A; CBS, 99.3 1.6E-11 5.4E-16 129.0 11.5 129 169-330 383-513 (527)
108 4af0_A Inosine-5'-monophosphat 99.3 1.2E-12 4E-17 134.3 2.5 163 205-411 92-257 (556)
109 2yvy_A MGTE, Mg2+ transporter 99.2 3.9E-11 1.3E-15 115.6 11.5 120 169-329 134-258 (278)
110 1zfj_A Inosine monophosphate d 99.2 8.9E-11 3E-15 122.2 15.0 116 269-412 95-211 (491)
111 4fxs_A Inosine-5'-monophosphat 99.2 7.6E-12 2.6E-16 130.1 4.1 112 270-411 95-208 (496)
112 1me8_A Inosine-5'-monophosphat 99.2 2.9E-12 9.8E-17 133.7 0.0 117 270-412 103-221 (503)
113 1me8_A Inosine-5'-monophosphat 99.2 5.9E-12 2E-16 131.4 2.4 167 170-397 96-267 (503)
114 3usb_A Inosine-5'-monophosphat 99.2 1E-09 3.5E-14 114.5 19.0 173 159-395 105-279 (511)
115 3org_A CMCLC; transporter, tra 99.1 1.6E-11 5.6E-16 131.5 4.2 151 168-326 451-623 (632)
116 4aef_A Neopullulanase (alpha-a 99.1 1.1E-10 3.9E-15 125.3 10.3 79 24-105 15-98 (645)
117 4avf_A Inosine-5'-monophosphat 99.1 5.6E-12 1.9E-16 131.0 -0.0 111 270-411 94-206 (490)
118 2zy9_A Mg2+ transporter MGTE; 99.1 4.1E-10 1.4E-14 116.6 13.4 129 160-329 143-278 (473)
119 1vrd_A Inosine-5'-monophosphat 99.1 8.3E-12 2.8E-16 130.1 0.1 114 270-413 101-216 (494)
120 1jcn_A Inosine monophosphate d 99.0 1.8E-11 6.3E-16 128.1 -4.0 117 270-411 114-232 (514)
121 1zfj_A Inosine monophosphate d 98.9 5.4E-09 1.9E-13 108.7 13.7 117 173-328 93-211 (491)
122 2cu0_A Inosine-5'-monophosphat 98.9 1.4E-10 4.7E-15 120.6 -0.2 109 270-411 99-207 (486)
123 3ghd_A A cystathionine beta-sy 98.9 3.1E-09 1.1E-13 80.6 6.3 62 364-429 2-63 (70)
124 1vrd_A Inosine-5'-monophosphat 98.9 2E-09 6.8E-14 112.0 6.5 118 171-328 96-215 (494)
125 4avf_A Inosine-5'-monophosphat 98.8 2.3E-09 7.8E-14 111.4 5.9 115 172-327 90-206 (490)
126 4fxs_A Inosine-5'-monophosphat 98.8 3.2E-09 1.1E-13 110.3 4.7 114 173-326 92-207 (496)
127 3ghd_A A cystathionine beta-sy 98.8 1.1E-08 3.8E-13 77.5 6.0 47 181-229 1-47 (70)
128 2cu0_A Inosine-5'-monophosphat 98.7 5.8E-09 2E-13 108.3 5.4 155 180-400 101-256 (486)
129 3fio_A A cystathionine beta-sy 98.7 1.5E-08 5E-13 75.9 6.0 63 363-429 1-63 (70)
130 4af0_A Inosine-5'-monophosphat 98.7 1.7E-09 5.8E-14 111.0 0.0 107 181-325 147-255 (556)
131 1jcn_A Inosine monophosphate d 98.7 1E-08 3.5E-13 107.2 4.6 119 171-326 109-231 (514)
132 2z0b_A GDE5, KIAA1434, putativ 98.4 6.3E-07 2.2E-11 76.3 8.1 57 25-81 8-75 (131)
133 3l2b_A Probable manganase-depe 98.4 3.3E-07 1.1E-11 85.9 7.1 56 357-412 10-65 (245)
134 3fio_A A cystathionine beta-sy 98.2 2.5E-06 8.4E-11 63.5 7.1 48 181-230 1-48 (70)
135 1ac0_A Glucoamylase; hydrolase 98.0 3.4E-06 1.2E-10 69.3 4.1 67 25-91 6-88 (108)
136 3c8d_A Enterochelin esterase; 97.9 4.7E-05 1.6E-09 76.8 10.3 86 25-112 30-154 (403)
137 1m7x_A 1,4-alpha-glucan branch 97.3 0.00061 2.1E-08 72.5 9.7 66 27-94 26-99 (617)
138 3aml_A OS06G0726400 protein; s 97.0 0.00092 3.1E-08 72.7 7.0 62 28-92 67-142 (755)
139 3k1d_A 1,4-alpha-glucan-branch 96.8 0.0014 4.8E-08 70.8 6.9 65 28-94 138-210 (722)
140 2laa_A Beta/alpha-amylase; SBD 96.8 0.0037 1.3E-07 50.5 7.3 64 26-92 5-76 (104)
141 2vn4_A Glucoamylase; hydrolase 96.2 0.024 8.2E-07 59.9 11.3 58 24-81 495-563 (599)
142 1qho_A Alpha-amylase; glycosid 96.0 0.019 6.4E-07 61.8 9.4 68 23-92 579-669 (686)
143 1cyg_A Cyclodextrin glucanotra 95.8 0.033 1.1E-06 59.8 10.5 69 24-92 578-663 (680)
144 1wzl_A Alpha-amylase II; pullu 95.6 0.015 5E-07 61.4 6.8 60 23-82 20-87 (585)
145 3bmv_A Cyclomaltodextrin gluca 95.3 0.031 1.1E-06 60.0 8.1 58 24-81 582-651 (683)
146 1d3c_A Cyclodextrin glycosyltr 95.0 0.044 1.5E-06 58.9 8.2 59 23-81 584-654 (686)
147 1vem_A Beta-amylase; beta-alph 94.9 0.045 1.6E-06 56.7 7.7 58 23-81 417-485 (516)
148 1bf2_A Isoamylase; hydrolase, 94.9 0.014 4.7E-07 63.5 3.8 55 28-85 18-85 (750)
149 2bhu_A Maltooligosyltrehalose 94.8 0.022 7.7E-07 60.2 5.1 61 27-94 35-96 (602)
150 3vgf_A Malto-oligosyltrehalose 94.7 0.016 5.5E-07 60.7 3.6 60 28-93 11-73 (558)
151 1j0h_A Neopullulanase; beta-al 94.7 0.022 7.7E-07 60.0 4.8 61 22-82 19-89 (588)
152 2wsk_A Glycogen debranching en 94.1 0.054 1.8E-06 57.9 6.1 53 28-84 21-77 (657)
153 2vr5_A Glycogen operon protein 94.1 0.04 1.4E-06 59.5 5.1 54 28-85 31-91 (718)
154 2e8y_A AMYX protein, pullulana 92.9 0.14 4.8E-06 55.2 6.9 63 28-93 115-184 (718)
155 2fhf_A Pullulanase; multiple d 92.2 0.12 4.1E-06 58.2 5.3 65 28-94 306-384 (1083)
156 4aio_A Limit dextrinase; hydro 91.1 0.17 5.8E-06 55.6 5.0 53 28-83 138-194 (884)
157 1ea9_C Cyclomaltodextrinase; h 90.8 0.053 1.8E-06 57.0 0.6 59 23-81 20-85 (583)
158 1gcy_A Glucan 1,4-alpha-maltot 90.7 0.046 1.6E-06 56.8 0.0 57 24-81 429-495 (527)
159 1ji1_A Alpha-amylase I; beta/a 90.4 0.3 1E-05 51.9 5.9 50 33-83 42-96 (637)
160 4fch_A Outer membrane protein 90.2 0.22 7.5E-06 45.5 4.2 51 36-87 12-64 (221)
161 2wan_A Pullulanase; hydrolase, 89.9 0.52 1.8E-05 52.3 7.6 60 25-86 152-221 (921)
162 2wan_A Pullulanase; hydrolase, 89.9 0.29 1E-05 54.2 5.6 58 31-92 331-397 (921)
163 2c3v_A Alpha-amylase G-6; carb 89.9 0.66 2.3E-05 37.0 6.1 63 27-91 11-80 (102)
164 3faw_A Reticulocyte binding pr 89.1 0.18 6.3E-06 55.5 3.1 64 28-93 146-223 (877)
165 2ya0_A Putative alkaline amylo 87.7 0.5 1.7E-05 50.9 5.4 64 28-93 26-105 (714)
166 3m07_A Putative alpha amylase; 83.4 1.3 4.6E-05 46.7 6.0 61 28-95 44-107 (618)
167 2ya1_A Putative alkaline amylo 78.8 2.6 8.9E-05 47.2 6.5 62 28-91 333-410 (1014)
168 2djm_A Glucoamylase A; beta sa 67.9 18 0.00062 28.8 7.3 54 36-89 33-98 (106)
169 4fe9_A Outer membrane protein 67.2 5.7 0.00019 40.2 5.2 47 36-83 150-198 (470)
170 1tif_A IF3-N, translation init 57.2 17 0.00058 27.3 4.9 32 385-416 13-44 (78)
171 4fem_A Outer membrane protein 56.5 8.7 0.0003 37.3 4.2 51 36-87 149-201 (358)
172 4dny_A Metalloprotease STCE; m 51.1 15 0.00052 30.1 4.1 23 67-90 99-122 (126)
173 2eef_A Protein phosphatase 1, 50.7 18 0.00063 30.9 4.8 59 26-84 48-122 (156)
174 4fe9_A Outer membrane protein 49.2 15 0.00052 36.9 4.8 54 36-90 260-320 (470)
175 2jnz_A PHL P 3 allergen; timot 48.5 39 0.0013 27.0 6.0 60 23-88 25-90 (108)
176 4fch_A Outer membrane protein 38.0 16 0.00055 32.8 2.6 49 37-85 117-169 (221)
177 4aef_A Neopullulanase (alpha-a 31.2 56 0.0019 34.2 5.7 51 25-81 124-178 (645)
178 1mhx_A Immunoglobulin-binding 29.0 19 0.00066 24.9 1.1 13 81-93 48-60 (65)
179 1igd_A Protein G; immunoglobul 23.5 29 0.00098 24.2 1.2 12 81-92 44-55 (61)
180 3fan_A Non-structural protein; 23.3 38 0.0013 30.3 2.2 25 383-407 124-148 (213)
181 3fil_A Immunoglobulin G-bindin 22.9 20 0.00067 24.4 0.2 12 81-92 39-50 (56)
182 4aee_A Alpha amylase, catalyti 22.7 67 0.0023 34.0 4.5 56 24-82 132-187 (696)
183 2fqm_A Phosphoprotein, P prote 22.2 46 0.0016 24.1 2.1 27 43-73 1-27 (75)
184 1ew4_A CYAY protein; friedreic 22.0 55 0.0019 25.9 2.8 17 73-91 68-84 (106)
185 2ee9_A Filamin-B; beta-sandwic 21.7 1.4E+02 0.0047 23.0 5.0 66 18-86 9-79 (95)
186 1p0z_A Sensor kinase CITA; tra 21.6 60 0.0021 26.0 3.1 18 387-404 105-122 (131)
187 3by8_A Sensor protein DCUS; hi 20.4 63 0.0022 26.3 3.0 19 387-405 110-128 (142)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=1.2e-31 Score=264.18 Aligned_cols=253 Identities=24% Similarity=0.417 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHh
Q 013832 153 EADLQVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILREL 232 (435)
Q Consensus 153 ~~~~e~~~~~i~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~ 232 (435)
+.+.....+++.+||+.++|||+||.+.++++++.++|+.+|+++|.+++++++||||++.++++|++|..||+.++.++
T Consensus 13 ~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~ 92 (323)
T 3t4n_C 13 SIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYY 92 (323)
T ss_dssp HHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHH
Confidence 35555678999999999999999999999999999999999999999999999999998767999999999999988766
Q ss_pred ccCCCCCChhhhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCe
Q 013832 233 GNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQ 312 (435)
Q Consensus 233 ~~~~~~l~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~ 312 (435)
+..+.. .+.++.+....+++..... ..|+++++++.+++++.+|++.|.+++++++||++.+...+ ..+
T Consensus 93 ~~~~~~--~~~l~~~~~~~v~~i~~~~--------~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~-~~~ 161 (323)
T 3t4n_C 93 FSNPDK--FELVDKLQLDGLKDIERAL--------GVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETH-REI 161 (323)
T ss_dssp HHCGGG--GGGGGGCBHHHHHHHHHHT--------TC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTC-CEE
T ss_pred HcCcch--hHHHHHHHHHHHHHHHHHh--------CCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCC-ccc
Confidence 543221 2345556566677665432 13678999999999999999999999999999998532222 113
Q ss_pred EEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEc
Q 013832 313 LLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVD 392 (435)
Q Consensus 313 lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD 392 (435)
++|++|++||++++..+... ......++.+++++ |.++++++.+++++.+|+++|.+++++++||||
T Consensus 162 l~Givt~~di~~~l~~~~~~----~~~~~~~v~~~~~~---------m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd 228 (323)
T 3t4n_C 162 VVSVLTQYRILKFVALNCRE----THFLKIPIGDLNII---------TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID 228 (323)
T ss_dssp EEEEEEHHHHHHHHHHHCGG----GGGCCSBGGGTTCS---------BCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred eEEEecHHHHHHHHHhcCCc----hhhhhCcHHHcCCC---------CCCCcEEECCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 99999999999998876533 22344566666432 235889999999999999999999999999999
Q ss_pred CCCcEEEEEeHHHHHHHHhhcccccCCCCCccHHHHHhhh
Q 013832 393 DNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQVTIVS 432 (435)
Q Consensus 393 ~~g~lvGiis~~DI~~~~~~~~~~~l~~~~~~v~~~l~~~ 432 (435)
++|+++|+||++||++++....+..+ +.+|.+++..+
T Consensus 229 ~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~~ 265 (323)
T 3t4n_C 229 ENGYLINVYEAYDVLGLIKGGIYNDL---SLSVGEALMRR 265 (323)
T ss_dssp TTCBEEEEEETTHHHHHHHTTHHHHT---TSBHHHHGGGS
T ss_pred CCCeEEEEEeHHHHHHHHhhchhhhc---cCCHHHHHhhc
Confidence 99999999999999999988777666 47899988753
No 2
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.96 E-value=1.1e-27 Score=236.67 Aligned_cols=245 Identities=31% Similarity=0.576 Sum_probs=194.7
Q ss_pred HHHHHHHHHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCC
Q 013832 157 QVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHG 236 (435)
Q Consensus 157 e~~~~~i~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~ 236 (435)
+.+++.+..||+..+++|+|+.+.++++++.+.|+.+|+++|.+++++++||+|.+.++++|++|..|++..+.......
T Consensus 22 ~~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~ 101 (330)
T 2v8q_E 22 ESNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSA 101 (330)
T ss_dssp -CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhcc
Confidence 34567899999999999999999999999999999999999999999999999976579999999999998775433110
Q ss_pred CCCChhhhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEe
Q 013832 237 SNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHI 316 (435)
Q Consensus 237 ~~l~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGi 316 (435)
.....+++...++.|.+.... +|.++++++.+++++.+|++.|.+++++++||++. +.| +++|+
T Consensus 102 -~~~~~~l~~~~~~~~~~~~~~----------im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~---~~~Gi 165 (330)
T 2v8q_E 102 -LVQIYELEEHKIETWREVYLQ----------DSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP--ESG---NTLYI 165 (330)
T ss_dssp -TTTCCCGGGCBHHHHHHHHSS----------SSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT--TTC---CEEEE
T ss_pred -ccchhHHhhccHHHHHHHHhh----------cccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC--CCC---cEEEE
Confidence 011123445556666554332 47889999999999999999999999999999962 145 79999
Q ss_pred eeHHhHHHHHHhhhcccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCc
Q 013832 317 ASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDS 396 (435)
Q Consensus 317 iT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~ 396 (435)
+|.+||++++.......+. ..++..++.++.+++. ++++++.+++++.+|+++|.+++++++||+|++|+
T Consensus 166 vt~~dl~~~~~~~~~~~~~-~~~~~~~v~~~~v~~~---------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~ 235 (330)
T 2v8q_E 166 LTHKRILKFLKLFITEFPK-PEFMSKSLEELQIGTY---------ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGR 235 (330)
T ss_dssp ECHHHHHHHHHHHSCSSSC-CGGGGSBHHHHTCSBC---------SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSB
T ss_pred EcHHHHHHHHHHHhhccCc-hhhhcCCHHHhcccCc---------CCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCc
Confidence 9999999998765432211 1234455666544332 37889999999999999999999999999998999
Q ss_pred EEEEEeHHHHHHHHhhcccccCCCCCccHHHHHh
Q 013832 397 LLDIYCRSDITALAKDKAYAHINLSEMTIHQVTI 430 (435)
Q Consensus 397 lvGiis~~DI~~~~~~~~~~~l~~~~~~v~~~l~ 430 (435)
++|+||++||++....+.|..+ +.+|.+++.
T Consensus 236 l~Giit~~dl~~~~~~~~~~~~---~~~v~~~~~ 266 (330)
T 2v8q_E 236 VVDIYSKFDVINLAAEKTYNNL---DVSVTKALQ 266 (330)
T ss_dssp EEEEEEGGGTGGGGGSSCCCCC---SSBHHHHGG
T ss_pred EEEEEEHHHHHHHHhccccccc---cCcHHHHHh
Confidence 9999999999988776656554 478888875
No 3
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.95 E-value=2.2e-26 Score=227.51 Aligned_cols=250 Identities=20% Similarity=0.420 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhc
Q 013832 154 ADLQVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELG 233 (435)
Q Consensus 154 ~~~e~~~~~i~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~ 233 (435)
.+.......+.+||...+|+|+|+.+.++++++.++|+.+|+++|.+++++++||+|++.++++|+||..|++..+...+
T Consensus 6 ~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~ 85 (334)
T 2qrd_G 6 ETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYY 85 (334)
T ss_dssp HHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHh
Confidence 44555778899999999999999999999999999999999999999999999999986689999999999998776543
Q ss_pred cCCCCC-ChhhhhhccHHHHHHHHHhhcccccCCCccCCCCc--eEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCC-C
Q 013832 234 NHGSNL-TEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPL--VYAGPNDNLKDVARKILHNEVATVPIIHSSSQDG-S 309 (435)
Q Consensus 234 ~~~~~l-~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~--v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g-~ 309 (435)
....+. ..+.++...++.+++....+ |.+++ +++.+++++.+|++.|.+++++++||++.+ .+ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~l~~i----------m~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--~~~~ 153 (334)
T 2qrd_G 86 QSSSFPEAIAEIDKFRLLGLREVERKI----------GAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVD--GETG 153 (334)
T ss_dssp HHCSCGGGGGGGGSCBHHHHHHHHHHH----------TCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEE--TTTT
T ss_pred hccCCccHHHHHhhhchhhHHHHHHhh----------ccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCC--CCcC
Confidence 210000 11234455666676655433 55566 899999999999999999999999999742 12 0
Q ss_pred CCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEE
Q 013832 310 FPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIP 389 (435)
Q Consensus 310 ~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lP 389 (435)
...++|++|.+||++++...... ......++.+++. .|.++++++.+++++.+|+++|.+++++++|
T Consensus 154 ~~~~~Givt~~dl~~~~~~~~~~----~~~~~~~v~~l~~---------~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~ 220 (334)
T 2qrd_G 154 SEMIVSVLTQYRILKFISMNCKE----TAMLRVPLNQMTI---------GTWSNLATASMETKVYDVIKMLAEKNISAVP 220 (334)
T ss_dssp EEEEEEEEEHHHHHHHHHHHCGG----GGGCCCBGGGSSC---------SBCSSCCCBCTTSBHHHHHHHHHHHTCSEEE
T ss_pred ccceEEEeeHHHHHHHHHhhccc----hhhhhCcHHHhCC---------cccCCceEECCCCcHHHHHHHHHHcCCcEEE
Confidence 01299999999999998754321 1122344544321 2345888999999999999999999999999
Q ss_pred EEcCCCcEEEEEeHHHHHHHHhhcccccCCCCCccHHHHHhh
Q 013832 390 IVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQVTIV 431 (435)
Q Consensus 390 VVD~~g~lvGiis~~DI~~~~~~~~~~~l~~~~~~v~~~l~~ 431 (435)
|+|++|+++|+||++||+..+....+..+ +.+|.+++..
T Consensus 221 Vvd~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~ 259 (334)
T 2qrd_G 221 IVNSEGTLLNVYESVDVMHLIQDGDYSNL---DLSVGEALLK 259 (334)
T ss_dssp EECTTCBEEEEEETHHHHHHHTTSCGGGG---GSBHHHHHTT
T ss_pred EEcCCCcEEEEEEHHHHHHHhhccccccc---cCcHHHHHhc
Confidence 99998999999999999998877655444 3677777753
No 4
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.91 E-value=4.8e-24 Score=173.33 Aligned_cols=88 Identities=43% Similarity=0.871 Sum_probs=78.8
Q ss_pred CCCceeeEEEEecCCCcEEEEEeecCCCCCCCCCccccCCCCeEEEEEEcCCceEEEEEEECCeeecCCCCCeeeCCCCC
Q 013832 21 PDTVLIPMRFVWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFISSEYGI 100 (435)
Q Consensus 21 ~~~~~~~~~f~w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~~d~~~~~~~d~~G~ 100 (435)
+.+..+|++|+|..+|++|+|+|+||+|+ .++|.+. .|.|+++++|++|.|+|||+|||+|++||.+|++.|+.|+
T Consensus 6 ~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~---~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~ 81 (96)
T 1z0n_A 6 APAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS---QNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT 81 (96)
T ss_dssp ----CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE---TTEEEEEEEECSEEEEEEEEETTEEECCTTSCEEECTTSC
T ss_pred CCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC---CCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeEECCCCC
Confidence 34567999999998899999999999999 6899884 4899999999999999999999999999999999999999
Q ss_pred eeeEEEecCCCC
Q 013832 101 VNTVLLATEPNF 112 (435)
Q Consensus 101 ~nnvl~v~~~~~ 112 (435)
.||+|.|.+.+.
T Consensus 82 ~Nnvi~V~~~d~ 93 (96)
T 1z0n_A 82 VNNIIQVKKTDF 93 (96)
T ss_dssp EEEEEEECSCTT
T ss_pred EeEEEEEcCCCc
Confidence 999999987654
No 5
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.90 E-value=3.8e-23 Score=198.31 Aligned_cols=202 Identities=13% Similarity=0.261 Sum_probs=153.2
Q ss_pred ceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHH
Q 013832 171 TAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTIS 250 (435)
Q Consensus 171 ~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~ 250 (435)
++.+.++.. +++++++++|+.+|+++|.+++++++||+|+++++++|++|..|++..+...... ..+......
T Consensus 4 ~v~~~i~~~-~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~------~~~~~~~~~ 76 (280)
T 3kh5_A 4 RVMKIAQNK-KIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKY------NLIREKHER 76 (280)
T ss_dssp BGGGTSCCS-CCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGG------HHHHTTSTT
T ss_pred hHHHHhcCC-CcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchh------hhhhhcccc
Confidence 455666544 8999999999999999999999999999997568999999999998765321110 000000000
Q ss_pred HHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhh
Q 013832 251 AWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYF 330 (435)
Q Consensus 251 ~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~ 330 (435)
.+... . ....+.+|.++++++.+++++.+|++.|.+++++++||++. +| +++|++|.+|+++++....
T Consensus 77 ~~~~~---~---~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~ 144 (280)
T 3kh5_A 77 NFLAA---I---NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND---EN---QLISLITERDVIRALLDKI 144 (280)
T ss_dssp CHHHH---T---TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHGGGS
T ss_pred chhHH---h---hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC---CC---EEEEEEEHHHHHHHHhhcC
Confidence 00000 0 00112257789999999999999999999999999999963 45 7999999999998876542
Q ss_pred cccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 013832 331 RHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 410 (435)
Q Consensus 331 ~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~ 410 (435)
.. ..++.++ |.++++++++++++.+|+++|.+++++++||+ ++|+++|+||.+||++.+
T Consensus 145 ~~--------~~~v~~~------------m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~ 203 (280)
T 3kh5_A 145 DE--------NEVIDDY------------ITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLL 203 (280)
T ss_dssp CT--------TCBSGGG------------CBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHH
T ss_pred CC--------CCCHHHH------------hCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHH
Confidence 11 1234433 33578899999999999999999999999999 579999999999999887
Q ss_pred hh
Q 013832 411 KD 412 (435)
Q Consensus 411 ~~ 412 (435)
..
T Consensus 204 ~~ 205 (280)
T 3kh5_A 204 GS 205 (280)
T ss_dssp TS
T ss_pred hh
Confidence 53
No 6
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.90 E-value=8.2e-24 Score=200.47 Aligned_cols=90 Identities=24% Similarity=0.610 Sum_probs=81.6
Q ss_pred ceeeEEEEecCCCcEEEEEeecCCCCCCCCCccccCCCCeEEEEEEcCCceEEEEEEECCeeecCCCCCeeeCCCCCeee
Q 013832 24 VLIPMRFVWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFISSEYGIVNT 103 (435)
Q Consensus 24 ~~~~~~f~w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~~d~~~~~~~d~~G~~nn 103 (435)
.++|++|+|+++|++|+|+|+|++|++.++|+|.++++|.|++++.|+||.|+|||+|||+|++|+++|++.|+.|+.||
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nN 81 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVN 81 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECSSSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceeccCCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcc
Confidence 36999999999999999999999999888999865668999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCC
Q 013832 104 VLLATEPNFM 113 (435)
Q Consensus 104 vl~v~~~~~~ 113 (435)
+|.|.+++..
T Consensus 82 vi~V~~~~~~ 91 (252)
T 2qlv_B 82 YIEVRQPEKN 91 (252)
T ss_dssp EEEECC----
T ss_pred eeeccCcccc
Confidence 9999876543
No 7
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.90 E-value=2.1e-23 Score=202.67 Aligned_cols=195 Identities=14% Similarity=0.236 Sum_probs=156.7
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhcc
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHT 248 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~ 248 (435)
..++.++|.. ++++++++.++.+|++.|.+++++.+||+|++ ++++|++|..|++..+..... ..+
T Consensus 92 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~lvGivt~~dl~~~~~~~~~-----------~~~ 157 (296)
T 3ddj_A 92 TTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDIN-DKPVGIVTEREFLLLYKDLDE-----------IFP 157 (296)
T ss_dssp TSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHGGGGGGSCC-----------CCB
T ss_pred cccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHhhhcccc-----------ccc
Confidence 5678888854 67899999999999999999999999999864 799999999998765432111 012
Q ss_pred HHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 249 ISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 249 i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
+ .+ +|.++++++.+++++.+|++.|.+++++++||++. +| +++|++|.+||++.+..
T Consensus 158 v---~~--------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~ 214 (296)
T 3ddj_A 158 V---KV--------------FMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD---DN---KVVGIVTVVNAIKQLAK 214 (296)
T ss_dssp H---HH--------------HSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHHH
T ss_pred H---HH--------------hhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHH
Confidence 2 11 26678899999999999999999999999999962 45 79999999999999886
Q ss_pred hhcccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHH
Q 013832 329 YFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA 408 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~ 408 (435)
.+..... ......++.++ |.++++++.++++|.+|+++|.+++++++||||++|+++|+||++||++
T Consensus 215 ~~~~~~~-~~~~~~~v~~~------------m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~ 281 (296)
T 3ddj_A 215 AVDKLDP-DYFYGKVVKDV------------MVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLI 281 (296)
T ss_dssp HHHHTCT-HHHHTCBHHHH------------SBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred HHhhcCh-hhhcCcCHHHH------------hCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHH
Confidence 5433210 01112333333 3458889999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 013832 409 LAKDK 413 (435)
Q Consensus 409 ~~~~~ 413 (435)
.+...
T Consensus 282 ~l~~~ 286 (296)
T 3ddj_A 282 ALHHI 286 (296)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.88 E-value=3.2e-22 Score=191.81 Aligned_cols=193 Identities=19% Similarity=0.370 Sum_probs=152.1
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhcc
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHT 248 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~ 248 (435)
..++.++|.. ++++++.+.++.+|++.|.++++.++||+|++ ++++|++|..|++..+....... .+
T Consensus 83 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~----------~~ 149 (280)
T 3kh5_A 83 NEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDE-NQLISLITERDVIRALLDKIDEN----------EV 149 (280)
T ss_dssp TSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHGGGSCTT----------CB
T ss_pred hhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCC-CEEEEEEEHHHHHHHHhhcCCCC----------CC
Confidence 4688888864 78899999999999999999999999999964 89999999999987654321100 01
Q ss_pred HHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 249 ISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 249 i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
+ +.+|.++++++.+++++.+|++.|.+++++++||++ +| +++|++|.+||++.+..
T Consensus 150 v-----------------~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~----~~---~~~Givt~~dl~~~~~~ 205 (280)
T 3kh5_A 150 I-----------------DDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVS----EG---RLVGIITSTDFIKLLGS 205 (280)
T ss_dssp S-----------------GGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHTS
T ss_pred H-----------------HHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE----CC---EEEEEEEHHHHHHHHhh
Confidence 1 113678889999999999999999999999999994 35 79999999999998864
Q ss_pred hhcc--cC-C-CccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHH
Q 013832 329 YFRH--CS-S-SLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRS 404 (435)
Q Consensus 329 ~~~~--~~-~-~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~ 404 (435)
.... .. . .......++.++ |.++++++++++++.+|+++|.+++++++||||++|+++|+||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~------------m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~ 273 (280)
T 3kh5_A 206 DWAFNHMQTGNVREITNVRMEEI------------MKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEK 273 (280)
T ss_dssp HHHHHHHHSCCTHHHHHCBHHHH------------SBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHH
T ss_pred hhhhhhhcccchhhhhCCcHHHH------------hcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHH
Confidence 3210 00 0 000012333333 346889999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 013832 405 DITALA 410 (435)
Q Consensus 405 DI~~~~ 410 (435)
||++.+
T Consensus 274 dil~~l 279 (280)
T 3kh5_A 274 DVLKYF 279 (280)
T ss_dssp HHGGGG
T ss_pred HHHHhh
Confidence 998754
No 9
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.88 E-value=1.3e-22 Score=196.93 Aligned_cols=195 Identities=11% Similarity=0.139 Sum_probs=152.4
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhcc
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHT 248 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~ 248 (435)
..++.|+|.. +++++++++|+.+|+++|.+++++++||+| ++++|++|..||+..+...... ..+
T Consensus 19 ~~~V~dim~~--~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~---------~~~- 83 (296)
T 3ddj_A 19 GMNIETLMIK--NPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKD---------SCS- 83 (296)
T ss_dssp CSSGGGTCEE--SCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC------------CC-
T ss_pred ccCHHHhccC--CCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccc---------ccc-
Confidence 4677888854 789999999999999999999999999998 7899999999998765321110 000
Q ss_pred HHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 249 ISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 249 i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
...+.... . ...+.+|.++++++.+++++.+|++.|.+++++++||++. ++ +++|++|.+|+++++..
T Consensus 84 ~~~~~~~~-~-----~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~lvGivt~~dl~~~~~~ 151 (296)
T 3ddj_A 84 QGDLYHIS-T-----TPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDI---ND---KPVGIVTEREFLLLYKD 151 (296)
T ss_dssp HHHHHHHH-T-----SBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHGGGGGG
T ss_pred chhhHHHh-c-----ccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHhhhc
Confidence 11111100 0 0112257788999999999999999999999999999963 35 79999999999876543
Q ss_pred hhcccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHH
Q 013832 329 YFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA 408 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~ 408 (435)
.. ...++.+++ .++++++.+++++.+|+++|.+++++++||+|++|+++|+||++||+.
T Consensus 152 ~~---------~~~~v~~~m------------~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 210 (296)
T 3ddj_A 152 LD---------EIFPVKVFM------------STKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIK 210 (296)
T ss_dssp SC---------CCCBHHHHS------------BCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred cc---------ccccHHHhh------------cCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 21 123444442 357889999999999999999999999999999999999999999998
Q ss_pred HHh
Q 013832 409 LAK 411 (435)
Q Consensus 409 ~~~ 411 (435)
.+.
T Consensus 211 ~~~ 213 (296)
T 3ddj_A 211 QLA 213 (296)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 10
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.87 E-value=3.6e-21 Score=189.12 Aligned_cols=196 Identities=17% Similarity=0.157 Sum_probs=149.7
Q ss_pred CCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCC----eEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHHHHHH
Q 013832 179 SGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKA----RFVGVLSASDFILILRELGNHGSNLTEEELETHTISAWKE 254 (435)
Q Consensus 179 s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~----~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~~~~e 254 (435)
+..+++++++.++.+|++.|.+++++.+||+|...+ +++|++|..|++..+...... ..+...++ ++
T Consensus 121 ~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~------~~~~~~~v---~~ 191 (323)
T 3t4n_C 121 QLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE------THFLKIPI---GD 191 (323)
T ss_dssp ---CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG------GGGCCSBG---GG
T ss_pred CCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc------hhhhhCcH---HH
Confidence 346789999999999999999999999999997532 399999999999877643221 00111111 11
Q ss_pred HHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccC
Q 013832 255 GKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCS 334 (435)
Q Consensus 255 ~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~ 334 (435)
. +..|.++++++.+++++.+|++.|.+++++++||++. +| +++|++|.+||++++......
T Consensus 192 ~-----------~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~---~~---~~~Giit~~dl~~~~~~~~~~-- 252 (323)
T 3t4n_C 192 L-----------NIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NG---YLINVYEAYDVLGLIKGGIYN-- 252 (323)
T ss_dssp T-----------TCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEETTHHHHHHHTTHHH--
T ss_pred c-----------CCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECC---CC---eEEEEEeHHHHHHHHhhchhh--
Confidence 1 1126788999999999999999999999999999963 45 799999999999988754211
Q ss_pred CCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 335 SSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 335 ~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
.+..++.+++.... ....+++++.+++++.+|+++|.+++++++||||++|+++|+||++||++.+..
T Consensus 253 ----~~~~~v~~~m~~~~------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 253 ----DLSLSVGEALMRRS------DDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp ----HTTSBHHHHGGGSC------TTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ----hccCCHHHHHhhcc------ccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 12345555532100 011278999999999999999999999999999999999999999999987754
No 11
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.86 E-value=4.9e-22 Score=193.84 Aligned_cols=87 Identities=24% Similarity=0.453 Sum_probs=79.9
Q ss_pred CCceeeEEEEecC-CCcEEEEEeecCCCCCCCCCccccCCCCeEEEEEEcCCceEEEEEEECCeeecCCCCCee-eCCCC
Q 013832 22 DTVLIPMRFVWPY-GGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFI-SSEYG 99 (435)
Q Consensus 22 ~~~~~~~~f~w~~-~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~~d~~~~~~-~d~~G 99 (435)
+...+|++|+|++ +|++|+|+|||+||+..+||+|.+ ++|.|+++++||||.|+|||+|||+|++||++|.. +|+.|
T Consensus 166 ~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~~-~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G 244 (294)
T 3nme_A 166 GLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLGK-GTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDG 244 (294)
T ss_dssp CCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEECT-TTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTS
T ss_pred ccccccceeeeccCCCCEEEEEEeccCCCCcccceEcC-CCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCC
Confidence 3567999999998 689999999999999779999863 47999999999999999999999999999999975 89999
Q ss_pred CeeeEEEecC
Q 013832 100 IVNTVLLATE 109 (435)
Q Consensus 100 ~~nnvl~v~~ 109 (435)
++||+|.|.+
T Consensus 245 ~~nn~~~v~~ 254 (294)
T 3nme_A 245 HTNNYAKVVD 254 (294)
T ss_dssp CCEEEEEECC
T ss_pred CEeEEEEECC
Confidence 9999999986
No 12
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.85 E-value=3.4e-21 Score=185.27 Aligned_cols=204 Identities=15% Similarity=0.199 Sum_probs=143.6
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHH-HHHHhccCCCCCChhhhhhc
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFIL-ILRELGNHGSNLTEEELETH 247 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~-il~~~~~~~~~l~~e~l~~~ 247 (435)
..++.++|.. .+++++++.++.+|++.|.++++..+||+|++ ++++|++|..|++. .+... ......
T Consensus 59 ~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~di~~~~~~~~---------~~~~~~ 126 (282)
T 2yzq_A 59 EEQLAMLVKR--DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSK-GKPVGILTVGDIIRRYFAKS---------EKYKGV 126 (282)
T ss_dssp -----CCCBS--CCCEEETTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTC---------SGGGGC
T ss_pred cCCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHhcc---------CCcccC
Confidence 3556677743 47789999999999999999999999999964 79999999999876 44210 000011
Q ss_pred cHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHH----
Q 013832 248 TISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGIL---- 323 (435)
Q Consensus 248 ~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl---- 323 (435)
++ +.+|.++++++.+++++.+|++.|.+++++++||++. .| +++|++|.+|++
T Consensus 127 ~v-----------------~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---~~---~~~Giit~~dl~~~~~ 183 (282)
T 2yzq_A 127 EI-----------------EPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDS---EG---NLVGIVDETDLLRDSE 183 (282)
T ss_dssp BS-----------------TTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECT---TS---CEEEEEEGGGGGGCGG
T ss_pred cH-----------------HHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcC---CC---eEEEEEEHHHHhhhhh
Confidence 11 1236778899999999999999999999999999962 35 799999999998
Q ss_pred --HHHHhhhcc-cC-------CC-ccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEc
Q 013832 324 --KCVCRYFRH-CS-------SS-LPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVD 392 (435)
Q Consensus 324 --~~l~~~~~~-~~-------~~-~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD 392 (435)
+++..+.-. .+ .. ...+...... .....+++.|.++++++.+++++.+|+++|.+++++++||||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 259 (282)
T 2yzq_A 184 IVRIMKSTELAASSEEEWILESHPTLLFEKFELQ----LPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIR 259 (282)
T ss_dssp GCC------------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred hhhhhccchhhhhhhhhhhcccchHHHHhHhhhh----hccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEEC
Confidence 444210000 00 00 0000000000 001123455667899999999999999999999999999999
Q ss_pred CCCcEEEEEeHHHHHHHHh
Q 013832 393 DNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 393 ~~g~lvGiis~~DI~~~~~ 411 (435)
++|+++|+||++||++.+.
T Consensus 260 ~~~~lvGiit~~Dil~~~~ 278 (282)
T 2yzq_A 260 GEGDLIGLIRDFDLLKVLV 278 (282)
T ss_dssp TTTEEEEEEEHHHHGGGGC
T ss_pred CCCCEEEEEeHHHHHHHHH
Confidence 8889999999999997654
No 13
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.85 E-value=1.6e-20 Score=185.16 Aligned_cols=202 Identities=15% Similarity=0.146 Sum_probs=153.2
Q ss_pred cccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHHHHH
Q 013832 174 ELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISAWK 253 (435)
Q Consensus 174 dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~~~~ 253 (435)
++| ..++++++++.++.+|++.|.+++++.+||+|++.|+++|++|..|++..+...... ... .++...++ +
T Consensus 122 ~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~-~~~--~~~~~~~v---~ 193 (330)
T 2v8q_E 122 QDS--FKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITE-FPK--PEFMSKSL---E 193 (330)
T ss_dssp SSS--CCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCS-SSC--CGGGGSBH---H
T ss_pred hcc--cCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhc-cCc--hhhhcCCH---H
Confidence 445 346889999999999999999999999999996348999999999999877654321 111 11111222 2
Q ss_pred HHHHhhcccccCCCccCC-CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcc
Q 013832 254 EGKAYLNRQIDSHGKAFP-RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRH 332 (435)
Q Consensus 254 e~~~~~~~~~~~~g~~~~-~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~ 332 (435)
+.. +|. ++++++.+++++.+|++.|.+++++++||++. +| +++|++|.+||++.+....
T Consensus 194 ~~~------------v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~---~~---~l~Giit~~dl~~~~~~~~-- 253 (330)
T 2v8q_E 194 ELQ------------IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDE---KG---RVVDIYSKFDVINLAAEKT-- 253 (330)
T ss_dssp HHT------------CSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECT---TS---BEEEEEEGGGTGGGGGSSC--
T ss_pred Hhc------------ccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECC---CC---cEEEEEEHHHHHHHHhccc--
Confidence 211 133 67889999999999999999999999999962 45 7999999999987654321
Q ss_pred cCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 333 CSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 333 ~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
...+..++.+++- ....+.++++++.+++++.+|+++|.+++++++||||++|+++|+||++||++.+..
T Consensus 254 ----~~~~~~~v~~~~~------~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 254 ----YNNLDVSVTKALQ------HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp ----CCCCSSBHHHHGG------GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHS
T ss_pred ----cccccCcHHHHHh------ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHh
Confidence 0112344444421 012234689999999999999999999999999999999999999999999987765
Q ss_pred c
Q 013832 413 K 413 (435)
Q Consensus 413 ~ 413 (435)
.
T Consensus 324 ~ 324 (330)
T 2v8q_E 324 T 324 (330)
T ss_dssp S
T ss_pred h
Confidence 3
No 14
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.85 E-value=4.1e-20 Score=182.41 Aligned_cols=201 Identities=15% Similarity=0.160 Sum_probs=151.1
Q ss_pred ccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCe----EEEeeehHHHHHHHHHhccCCCCCChhhhhhccHH
Q 013832 175 LLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKAR----FVGVLSASDFILILRELGNHGSNLTEEELETHTIS 250 (435)
Q Consensus 175 l~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~----~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~ 250 (435)
+|....+++++.++.++.+|++.|.+++++.+||+|+..++ ++|++|..|++..+...... ......++
T Consensus 112 im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~------~~~~~~~v- 184 (334)
T 2qrd_G 112 IGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE------TAMLRVPL- 184 (334)
T ss_dssp HTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGG------GGGCCCBG-
T ss_pred hccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccc------hhhhhCcH-
Confidence 44444455899999999999999999999999999975344 99999999998876532110 00000111
Q ss_pred HHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhh
Q 013832 251 AWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYF 330 (435)
Q Consensus 251 ~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~ 330 (435)
++. +.+|.++++++.+++++.+|++.|.+++++++||++. +| +++|++|.+||++++....
T Consensus 185 --~~l-----------~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~dl~~~~~~~~ 245 (334)
T 2qrd_G 185 --NQM-----------TIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNS---EG---TLLNVYESVDVMHLIQDGD 245 (334)
T ss_dssp --GGS-----------SCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEETHHHHHHHTTSC
T ss_pred --HHh-----------CCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcC---CC---cEEEEEEHHHHHHHhhccc
Confidence 000 1126788999999999999999999999999999962 45 7999999999998876431
Q ss_pred cccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 013832 331 RHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 410 (435)
Q Consensus 331 ~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~ 410 (435)
. .....++.+++... ..+ .++++++.+++++.+|+++|.+++++++||||++|+++|+||++||++.+
T Consensus 246 ~------~~~~~~v~~~m~~~----~~~--~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~ 313 (334)
T 2qrd_G 246 Y------SNLDLSVGEALLKR----PAN--FDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYI 313 (334)
T ss_dssp G------GGGGSBHHHHHTTC----CTT--CCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred c------ccccCcHHHHHhcc----ccc--CCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHH
Confidence 1 11234454443210 000 03788999999999999999999999999999999999999999999887
Q ss_pred hhc
Q 013832 411 KDK 413 (435)
Q Consensus 411 ~~~ 413 (435)
...
T Consensus 314 ~~~ 316 (334)
T 2qrd_G 314 IYD 316 (334)
T ss_dssp HSC
T ss_pred Hhc
Confidence 654
No 15
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.82 E-value=4e-20 Score=177.71 Aligned_cols=177 Identities=18% Similarity=0.296 Sum_probs=128.2
Q ss_pred ceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHH
Q 013832 171 TAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTIS 250 (435)
Q Consensus 171 ~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~ 250 (435)
++.++|. .+++++++++|+.+|+++|.++++.++||+|+ +++++|++|..|++..+.. .+
T Consensus 2 ~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~~---------------~~-- 61 (282)
T 2yzq_A 2 RVKTIMT--QNPVTITLPATRNYALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPDE---------------EQ-- 61 (282)
T ss_dssp BHHHHSE--ESCCCEESSCC------------CCEEEEECT-TCCEEEEEESSCC-------------------------
T ss_pred chHHhcc--CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhcc---------------CC--
Confidence 3455664 47889999999999999999999999999996 4899999999998743210 00
Q ss_pred HHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHH-HHHhh
Q 013832 251 AWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK-CVCRY 329 (435)
Q Consensus 251 ~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~-~l~~~ 329 (435)
++ .+|.++++++.+++++.+|++.|.+++++++||+++ +| +++|++|.+|+++ ++...
T Consensus 62 -v~--------------~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~di~~~~~~~~ 120 (282)
T 2yzq_A 62 -LA--------------MLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS---KG---KPVGILTVGDIIRRYFAKS 120 (282)
T ss_dssp -----------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTC
T ss_pred -HH--------------HHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHhcc
Confidence 11 136677889999999999999999999999999963 35 7999999999987 55432
Q ss_pred hcccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHH
Q 013832 330 FRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDIT 407 (435)
Q Consensus 330 ~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~ 407 (435)
. .....+++ +.|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+||+
T Consensus 121 ~-------~~~~~~v~------------~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 121 E-------KYKGVEIE------------PYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLL 179 (282)
T ss_dssp S-------GGGGCBST------------TTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGG
T ss_pred C-------CcccCcHH------------HHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHh
Confidence 0 01122333 33446788999999999999999999999999999899999999999998
No 16
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.75 E-value=1.9e-18 Score=154.43 Aligned_cols=157 Identities=19% Similarity=0.259 Sum_probs=113.0
Q ss_pred HHHHHHHHHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCC
Q 013832 157 QVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHG 236 (435)
Q Consensus 157 e~~~~~i~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~ 236 (435)
++.++.+.+.|+..++.|+|. .++++++++.|+.+|+++|.+++++++||+|+ +|+++|+||..|++..+......
T Consensus 5 ~~~~~~~~~~l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dll~~~~~~~~~- 80 (170)
T 4esy_A 5 QARRRAIARAIRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-NGHLVGIITESDFLRGSIPFWIY- 80 (170)
T ss_dssp HHHHHHHHHHHHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECT-TSCEEEEEEGGGGGGGTCCTTHH-
T ss_pred HHHHHHHHHHHcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-CccEEEEEEHHHHHHHHhhcccc-
Confidence 445778888999999999994 58999999999999999999999999999996 48999999999987532110000
Q ss_pred CCCChhhhhh-ccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEE
Q 013832 237 SNLTEEELET-HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLH 315 (435)
Q Consensus 237 ~~l~~e~l~~-~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvG 315 (435)
...+.+.. .............. ....+.+|+++++++.+++++.+|+++|.+++++++||++ +| +++|
T Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd----~g---~lvG 149 (170)
T 4esy_A 81 --EASEILSRAIPAPEVEHLFETGR--KLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ----DG---VPVG 149 (170)
T ss_dssp --HHHHHHTTTSCHHHHHHHHHHHT--TCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE----TT---EEEE
T ss_pred --chhhhhhhccchhhHHhhhcccc--ccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE----CC---EEEE
Confidence 00000000 00000000000000 0001124889999999999999999999999999999996 35 8999
Q ss_pred eeeHHhHHHHHHh
Q 013832 316 IASLSGILKCVCR 328 (435)
Q Consensus 316 iiT~~dIl~~l~~ 328 (435)
|||.+||++++..
T Consensus 150 ivt~~Dil~~l~~ 162 (170)
T 4esy_A 150 IVTRRDLLKLLLL 162 (170)
T ss_dssp EEEHHHHTTTSCC
T ss_pred EEEHHHHHHHHHh
Confidence 9999999987653
No 17
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.71 E-value=1.9e-16 Score=149.68 Aligned_cols=212 Identities=13% Similarity=0.172 Sum_probs=129.1
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhcc
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHT 248 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~ 248 (435)
..++.|+|. .++++++++.++.+|+++|.+++++++||+|+ +|+++|++|..|++..+...... . .......+
T Consensus 6 ~~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-~~~l~Giit~~di~~~~~~~~~~--~--~~~~~~~~ 78 (245)
T 3l2b_A 6 KLKVEDLEM--DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG-NNHLLGMLSTSNITATYMDIWDS--N--ILAKSATS 78 (245)
T ss_dssp CCBGGGSCC--BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHHCCCCT--T--HHHHTTCC
T ss_pred cCcHHHhcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHhhhh--h--hhhhccCC
Confidence 357888884 46889999999999999999999999999996 48999999999998876532111 0 00001111
Q ss_pred HHHHHHHHHh--hcccc---cCC--------------CccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCC
Q 013832 249 ISAWKEGKAY--LNRQI---DSH--------------GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGS 309 (435)
Q Consensus 249 i~~~~e~~~~--~~~~~---~~~--------------g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~ 309 (435)
+..+.+.... +.... ... ..+....++.+. .-.++...+++.+++.+++.+.......
T Consensus 79 ~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvg---dr~~~~~~~i~~~~~~liit~~~~~~~~ 155 (245)
T 3l2b_A 79 LDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAG---DRAEIQAELIELKVSLLIVTGGHTPSKE 155 (245)
T ss_dssp HHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEEC---SCHHHHHHHHHTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEEC---CCHHHHHHHHHcCCCEEEECCCCCCCHH
Confidence 1111111100 00000 000 001123344442 2378899999999999998842110000
Q ss_pred ------CCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcccccccCCCCC-CCceEecCCCCHHHHHHHHHH
Q 013832 310 ------FPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR-RPLAMLRPSASLSAALNLLVQ 382 (435)
Q Consensus 310 ------~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~-~~v~tv~~d~~L~~a~~~m~~ 382 (435)
...+-.+.|..|......... ...+++++ |. ++++++++++++.+|+++|.+
T Consensus 156 v~~~a~~~~~~~i~t~~d~~~~~~~~~---------~~~~v~~i------------m~~~~~~~~~~~~~~~~~~~~m~~ 214 (245)
T 3l2b_A 156 IIELAKKNNITVITTPHDSFTASRLIV---------QSLPVDYV------------MTKDNLVAVSTDDLVEDVKVTMSE 214 (245)
T ss_dssp HHHHHHHHTCEEEECSSCHHHHHHHGG---------GGSBHHHH------------SBCTTCCCEETTSBHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCChHHHHHHHh---------cCCceeeE------------ecCCccEEECCCCcHHHHHHHHHh
Confidence 001234445545443222111 12334443 34 588999999999999999999
Q ss_pred cCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 383 AQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 383 ~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
++++++||||++|+++|+||++||++..+
T Consensus 215 ~~~~~~pVvd~~~~~~Giit~~dll~~~~ 243 (245)
T 3l2b_A 215 TRYSNYPVIDENNKVVGSIARFHLISTHK 243 (245)
T ss_dssp HCCSEEEEECTTCBEEEEEECC-------
T ss_pred cCCceEEEEcCCCeEEEEEEHHHhhchhh
Confidence 99999999999999999999999997654
No 18
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.71 E-value=1.9e-17 Score=147.91 Aligned_cols=128 Identities=20% Similarity=0.364 Sum_probs=97.9
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhccc-----CCCcc--c--
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHC-----SSSLP--I-- 339 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~-----~~~~~--~-- 339 (435)
+|+++++++.+++++.+|++.|.+++++++||+|. +| +++|+||.+||++.+....... ....+ .
T Consensus 23 iM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~g---~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
T 4esy_A 23 ILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ---NG---HLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVE 96 (170)
T ss_dssp GCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT---TS---CEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHH
T ss_pred hcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC---Cc---cEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHH
Confidence 58899999999999999999999999999999963 46 7999999999987543221000 00000 0
Q ss_pred -cccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 013832 340 -LKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 410 (435)
Q Consensus 340 -~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~ 410 (435)
+......+ .+++.|.++++++.+++++.+|+++|.+++++++|||| +|+++|+||++||++++
T Consensus 97 ~~~~~~~~~-------~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 97 HLFETGRKL-------TASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp HHHHHHTTC-------BHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTS
T ss_pred hhhcccccc-------chhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 00000011 13344567999999999999999999999999999998 59999999999999754
No 19
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.68 E-value=1e-16 Score=141.72 Aligned_cols=120 Identities=16% Similarity=0.213 Sum_probs=97.3
Q ss_pred CCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCc
Q 013832 271 PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVG 350 (435)
Q Consensus 271 ~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ig 350 (435)
..+++++.+++|+.+|+++|.+++++++||+|+ ++ +++|++|.+|+++++....... ......++.
T Consensus 24 ~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~---~~---~lvGiit~~Di~~~~~~~~~~~---~~~~~~~v~----- 89 (156)
T 3k6e_A 24 AKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADTDIV----- 89 (156)
T ss_dssp TTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTSBGG-----
T ss_pred hhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC---CC---cEEEEEEecchhhhhhhccccc---ccccccCHH-----
Confidence 368999999999999999999999999999963 45 7999999999999887542110 011123333
Q ss_pred ccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 351 TWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 351 t~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
+.|.++++++++++++.+|+++|.++++ +||||++|+++|+||++||++.+..-
T Consensus 90 -------~im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~~~ 143 (156)
T 3k6e_A 90 -------HMTKTDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp -------GTCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred -------HhhcCCceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHHHH
Confidence 3345789999999999999999988765 99999999999999999999987643
No 20
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.68 E-value=2.8e-16 Score=131.66 Aligned_cols=114 Identities=20% Similarity=0.344 Sum_probs=98.3
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|.++++++.+++++.+|++.|.+++++.+||++ ++| +++|++|.+|+++++.... .++.++
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~G~vt~~dl~~~~~~~~-----------~~v~~~-- 67 (122)
T 3kpb_A 7 LSKPPITAHSNISIMEAAKILIKHNINHLPIVD---EHG---KLVGIITSWDIAKALAQNK-----------KTIEEI-- 67 (122)
T ss_dssp CCSCCCCEETTSBHHHHHHHHHHHTCSCEEEEC---TTS---BEEEEECHHHHHHHHHTTC-----------CBGGGT--
T ss_pred hCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEEC---CCC---CEEEEEEHHHHHHHHHhcc-----------cCHHHH--
Confidence 778899999999999999999999999999996 245 8999999999998876421 234433
Q ss_pred cccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 350 GTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 350 gt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
|.++++++.+++++.+|+++|.+++++++||+|++|+++|+||+.||++.+.+
T Consensus 68 ----------~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 68 ----------MTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp ----------SBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred ----------hcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 23578899999999999999999999999999998999999999999987654
No 21
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.68 E-value=3.9e-16 Score=139.77 Aligned_cols=119 Identities=13% Similarity=0.157 Sum_probs=100.9
Q ss_pred cCC--CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccc
Q 013832 269 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 346 (435)
Q Consensus 269 ~~~--~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 346 (435)
+|. .+++++.+++++.+|++.|.+++++++||++. +.+ +++|++|.+||++.+.... ..++.+
T Consensus 47 iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~~v~~ 111 (172)
T 3lhh_A 47 LMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN--NVD---DMVGIISAKQLLSESIAGE----------RLELVD 111 (172)
T ss_dssp TSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS--STT---SEEEEEEHHHHHHHHHTTC----------CCCGGG
T ss_pred hCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---eEEEEEEHHHHHHHHhhcC----------cccHHH
Confidence 576 67899999999999999999999999999963 215 7999999999998775321 234444
Q ss_pred ccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc
Q 013832 347 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY 415 (435)
Q Consensus 347 l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~ 415 (435)
+ | ++++++.+++++.+|+++|.+++++.+||||++|+++|+||+.||+..+.....
T Consensus 112 i------------m-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~ 167 (172)
T 3lhh_A 112 L------------V-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFF 167 (172)
T ss_dssp G------------C-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC
T ss_pred H------------h-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCc
Confidence 4 3 478899999999999999999999999999999999999999999998776443
No 22
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.67 E-value=6.4e-16 Score=134.40 Aligned_cols=116 Identities=12% Similarity=0.162 Sum_probs=99.3
Q ss_pred cCCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccc
Q 013832 269 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 346 (435)
Q Consensus 269 ~~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 346 (435)
+|.+ +++++.+++++.+|++.|.+++++++||++. +.| +++|++|.+|+++.+.... ..++.+
T Consensus 28 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~~v~~ 92 (148)
T 3lv9_A 28 IMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK--NKD---DILGFVHIRDLYNQKINEN----------KIELEE 92 (148)
T ss_dssp TSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------CCCGGG
T ss_pred ccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhcCC----------CccHHH
Confidence 4666 8999999999999999999999999999963 225 7999999999998876531 233444
Q ss_pred ccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 347 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 347 l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
+ | ++++++++++++.+|+++|.+++++++||||++|+++|+||+.||+..+..
T Consensus 93 ~------------m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 93 I------------L-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp T------------C-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred h------------c-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 3 3 478899999999999999999999999999999999999999999987654
No 23
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.67 E-value=2.7e-16 Score=133.86 Aligned_cols=116 Identities=10% Similarity=0.148 Sum_probs=97.4
Q ss_pred cCC--CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccc
Q 013832 269 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 346 (435)
Q Consensus 269 ~~~--~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 346 (435)
+|. .+++++.+++++.+|++.|.+++++++||++. +.+ +++|++|.+|+++.+..... ..++.+
T Consensus 11 iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~~~~---------~~~v~~ 76 (130)
T 3i8n_A 11 VMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE--QKD---NIIGFVHRLELFKMQQSGSG---------QKQLGA 76 (130)
T ss_dssp TSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS--STT---CEEEECCHHHHHHHHHTTTT---------TSBHHH
T ss_pred CCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---cEEEEEEHHHHHHHHhcCCC---------cCCHHH
Confidence 465 46779999999999999999999999999963 225 79999999999988764311 244544
Q ss_pred ccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 347 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 347 l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
++ ++++++.+++++.+|+++|.+++++++||||++|+++|+||+.||++.+.
T Consensus 77 ~m-------------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 77 VM-------------RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp HS-------------EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred Hh-------------cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 43 25779999999999999999999999999999999999999999998764
No 24
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.66 E-value=1.3e-16 Score=137.18 Aligned_cols=118 Identities=9% Similarity=0.122 Sum_probs=94.3
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcc
Q 013832 272 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 351 (435)
Q Consensus 272 ~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt 351 (435)
.+++++.+++++.+|++.|.+++++++||++. +.+ +++|++|.+||++++.... ....++.+++
T Consensus 13 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~--------~~~~~v~~~m--- 76 (136)
T 3lfr_A 13 SQMISIKATQTPREFLPAVIDAAHSRYPVIGE--SHD---DVLGVLLAKDLLPLILKAD--------GDSDDVKKLL--- 76 (136)
T ss_dssp GGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGGSSS--------GGGCCGGGTC---
T ss_pred HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHhcc--------CCCcCHHHHc---
Confidence 57889999999999999999999999999963 225 7999999999987654210 1123444442
Q ss_pred cccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc
Q 013832 352 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY 415 (435)
Q Consensus 352 ~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~ 415 (435)
++++++.+++++.+|+++|.+++++.+||+|++|+++|+||++||+..+....+
T Consensus 77 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~ 130 (136)
T 3lfr_A 77 ----------RPATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIE 130 (136)
T ss_dssp ----------BCCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-----
T ss_pred ----------CCCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCc
Confidence 257899999999999999999999999999999999999999999986655443
No 25
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.66 E-value=3.9e-16 Score=133.13 Aligned_cols=116 Identities=12% Similarity=0.133 Sum_probs=96.6
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcc
Q 013832 272 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 351 (435)
Q Consensus 272 ~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt 351 (435)
.+++++.+++++.+|++.|.+++++++||+++ +.+ +++|++|.+||++.+.... .+...++.+++
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~--~~~---~lvGivt~~dl~~~~~~~~-------~~~~~~v~~~m--- 76 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRD--SLD---DAISMLRVREAYRLMTEKK-------EFTKEIMLRAA--- 76 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEESS--SGG---GEEEEEEHHHHHHHHTSSS-------CCCHHHHHHHS---
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcC--CCC---cEEEEEEHHHHHHHHhccC-------ccchhhHHHhc---
Confidence 46889999999999999999999999999952 235 7999999999998775421 11123344442
Q ss_pred cccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 352 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 352 ~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
++++++++++++.+|+++|.+++++.+||+|++|+++|+||+.||+..+..
T Consensus 77 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 77 ----------DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp ----------BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred ----------cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 367899999999999999999999999999999999999999999987654
No 26
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.66 E-value=1.7e-16 Score=134.52 Aligned_cols=115 Identities=12% Similarity=0.159 Sum_probs=94.5
Q ss_pred CCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccc
Q 013832 270 FPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 347 (435)
Q Consensus 270 ~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l 347 (435)
|.+ +++++.+++++.+|++.|.+++++++||++. +.+ +++|++|.+|+++.+.... ...++.++
T Consensus 9 M~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~---------~~~~v~~~ 74 (127)
T 3nqr_A 9 MIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISE--DKD---HIEGILMAKDLLPFMRSDA---------EAFSMDKV 74 (127)
T ss_dssp SEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGSTTC---------CCCCHHHH
T ss_pred cccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhccC---------CCCCHHHH
Confidence 553 4889999999999999999999999999963 225 7999999999987654221 12344444
Q ss_pred cCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 348 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 348 ~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
+ ++++++.+++++.+|+++|.+++++++||||++|+++|+||++||++.+.
T Consensus 75 m-------------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 75 L-------------RTAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIV 125 (127)
T ss_dssp C-------------BCCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC-
T ss_pred c-------------CCCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 2 25678999999999999999999999999999999999999999998643
No 27
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.65 E-value=4e-16 Score=132.70 Aligned_cols=112 Identities=12% Similarity=0.202 Sum_probs=93.4
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcc
Q 013832 272 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 351 (435)
Q Consensus 272 ~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt 351 (435)
.+++++.+++++.+|++.|.+++++++||++. +.+ +++|++|.+|+++.+... ..++.+++
T Consensus 15 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~~-----------~~~v~~~m--- 75 (129)
T 3jtf_A 15 SRMDLLDISQPLPQLLATIIETAHSRFPVYED--DRD---NIIGILLAKDLLRYMLEP-----------ALDIRSLV--- 75 (129)
T ss_dssp GGCCCEETTSCHHHHHHHHHHSCCSEEEEESS--STT---CEEEEEEGGGGGGGGTCT-----------TSCGGGGC---
T ss_pred HHeEEECCCCCHHHHHHHHHHcCCCEEEEEcC--CCC---cEEEEEEHHHHHhHhccC-----------CcCHHHHh---
Confidence 57789999999999999999999999999963 225 799999999997654310 23344442
Q ss_pred cccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 352 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 352 ~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
++++++.+++++.+|+++|.+++++.+||+|++|+++|+||++||++.+..
T Consensus 76 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 76 ----------RPAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp ----------BCCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHH
T ss_pred ----------CCCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 257899999999999999999999999999999999999999999987654
No 28
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.65 E-value=1.5e-15 Score=127.55 Aligned_cols=119 Identities=18% Similarity=0.299 Sum_probs=98.3
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|.++++++.+++++.+|++.|.+++.+.+||++ +| +++|++|.+|+++++..... ....++.+++
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~G~it~~dl~~~~~~~~~-------~~~~~v~~~m- 71 (125)
T 1pbj_A 7 MVTDVDTIDITASLEDVLRNYVENAKGSSVVVK----EG---VRVGIVTTWDVLEAIAEGDD-------LAEVKVWEVM- 71 (125)
T ss_dssp CBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE----TT---EEEEEEEHHHHHHHHHHTCC-------TTTSBHHHHC-
T ss_pred cCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe----CC---eeEEEEeHHHHHHHHhcCCc-------ccccCHHHHc-
Confidence 678899999999999999999999999999996 35 79999999999987765321 1124444442
Q ss_pred cccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc
Q 013832 350 GTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY 415 (435)
Q Consensus 350 gt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~ 415 (435)
.+++.++.+++++.+|+++|.+++++++||+|+ |+++|+||++||++.+.++.|
T Consensus 72 -----------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~~~~ 125 (125)
T 1pbj_A 72 -----------ERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMAKRY 125 (125)
T ss_dssp -----------BCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC----
T ss_pred -----------CCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHhccC
Confidence 347889999999999999999999999999998 999999999999988765543
No 29
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.65 E-value=4.7e-16 Score=136.24 Aligned_cols=120 Identities=11% Similarity=0.133 Sum_probs=99.0
Q ss_pred CCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEE-ecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccc
Q 013832 270 FPR--PLVYAGPNDNLKDVARKILHNEVATVPII-HSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 346 (435)
Q Consensus 270 ~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVv-d~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 346 (435)
|.+ +++++.+++++.+|++.|.+++++++||+ +. +.+ +++|+||.+||++.+.... ..++.+
T Consensus 26 M~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~--~~~---~lvGivt~~dl~~~~~~~~----------~~~v~~ 90 (153)
T 3oco_A 26 MVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADN--DKD---KIIGYAYNYDIVRQARIDD----------KAKIST 90 (153)
T ss_dssp SEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETT--EEE---EEEEEEEHHHHHHHHHHHT----------TSBGGG
T ss_pred ecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECC--CCC---cEEEEEEHHHHHhHHhcCC----------CCcHHH
Confidence 554 78899999999999999999999999999 42 235 7999999999998876531 233444
Q ss_pred ccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccccc
Q 013832 347 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAH 417 (435)
Q Consensus 347 l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~~~ 417 (435)
+ | ++++++.+++++.+|+++|.+++++++||||++|+++|+||+.||+..+....+.+
T Consensus 91 ~------------m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~de 148 (153)
T 3oco_A 91 I------------M-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRDE 148 (153)
T ss_dssp T------------C-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-----
T ss_pred H------------h-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCCc
Confidence 3 3 47899999999999999999999999999999999999999999999887655543
No 30
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.65 E-value=7.6e-16 Score=131.05 Aligned_cols=126 Identities=11% Similarity=0.221 Sum_probs=102.1
Q ss_pred hccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 167 LSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 167 l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
|...++.|+|....++++++++.|+.+|++.|.++++.++||+|.+.++++|++|..|++..+..... .
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~-----------~ 71 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSG-----------Q 71 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTT-----------T
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCC-----------c
Confidence 56789999998777888999999999999999999999999999654799999999999876542110 1
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l 326 (435)
.++ ++. | ++++++.+++++.+|++.|.+++++++||+| ++| +++|++|..||++.+
T Consensus 72 ~~v---~~~--------------m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---~~g---~~vGivt~~dil~~l 127 (130)
T 3i8n_A 72 KQL---GAV--------------M-RPIQVVLNNTALPKVFDQMMTHRLQLALVVD---EYG---TVLGLVTLEDIFEHL 127 (130)
T ss_dssp SBH---HHH--------------S-EECCEEETTSCHHHHHHHHHHHTCCEEEEEC---TTS---CEEEEEEHHHHHHHH
T ss_pred CCH---HHH--------------h-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEc---CCC---CEEEEEEHHHHHHHH
Confidence 112 221 4 4577999999999999999999999999996 345 799999999999987
Q ss_pred H
Q 013832 327 C 327 (435)
Q Consensus 327 ~ 327 (435)
.
T Consensus 128 ~ 128 (130)
T 3i8n_A 128 V 128 (130)
T ss_dssp H
T ss_pred c
Confidence 5
No 31
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.65 E-value=3.8e-16 Score=132.43 Aligned_cols=117 Identities=17% Similarity=0.216 Sum_probs=97.8
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
+|.+++.++.+++++.+|++.|.+++++.+||++ + | +++|++|.+||++.+..... ...++.++
T Consensus 10 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~-~---~~~Givt~~dl~~~~~~~~~--------~~~~v~~~- 73 (128)
T 3gby_A 10 LAETDYPVFTLGGSTADAARRLAASGCACAPVLD---G-E---RYLGMVHLSRLLEGRKGWPT--------VKEKLGEE- 73 (128)
T ss_dssp GCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHTTCSSSCC--------TTCBCCGG-
T ss_pred hhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEE---C-C---EEEEEEEHHHHHHHHhhCCc--------ccCcHHHH-
Confidence 4788899999999999999999999999999996 2 5 89999999999865432100 01233333
Q ss_pred CcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 349 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 349 igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
|.++++++.+++++.+|+++|.+++++++||||++|+++|+||++||++.+.+
T Consensus 74 -----------m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 74 -----------LLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp -----------GCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred -----------ccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 34578899999999999999999999999999999999999999999987754
No 32
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.64 E-value=2e-15 Score=128.45 Aligned_cols=118 Identities=20% Similarity=0.324 Sum_probs=100.1
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
+|.++++++.+++++.+|++.|.+++++.+||++ +| +++|++|.+|+++++..... ...++.++
T Consensus 9 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~--------~~~~v~~~- 72 (133)
T 2ef7_A 9 YMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD----GN---KPVGIITERDIVKAIGKGKS--------LETKAEEF- 72 (133)
T ss_dssp TSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHTTCC--------TTCBGGGT-
T ss_pred hccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEcHHHHHHHHhcCCC--------cccCHHHH-
Confidence 4778899999999999999999999999999996 34 79999999999887764311 12344443
Q ss_pred CcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 349 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 349 igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
|.+++.++.+++++.+|+++|.+++++++||||++|+++|+||+.||+..+.+.
T Consensus 73 -----------~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 73 -----------MTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp -----------SEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred -----------cCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 234788999999999999999999999999999899999999999999887654
No 33
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.64 E-value=2.1e-15 Score=131.05 Aligned_cols=127 Identities=13% Similarity=0.235 Sum_probs=106.4
Q ss_pred hccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 167 LSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 167 l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
|...++.|+|....++++++++.|+.+|++.|.++++..+||+|.+.++++|+||..|++..+.....
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~------------ 87 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINENK------------ 87 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSC------------
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCCC------------
Confidence 56789999997656889999999999999999999999999999644799999999999876643210
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l 326 (435)
.++ + .+| ++++++.+++++.+|+++|.+++++.+||+| +.| +++|+||..||++.+
T Consensus 88 ~~v---~--------------~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---~~g---~~~Giit~~dil~~l 143 (148)
T 3lv9_A 88 IEL---E--------------EIL-RDIIYISENLTIDKALERIRKEKLQLAIVVD---EYG---GTSGVVTIEDILEEI 143 (148)
T ss_dssp CCG---G--------------GTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---SEEEEEEHHHHHHHH
T ss_pred ccH---H--------------Hhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe---CCC---CEEEEEEHHHHHHHH
Confidence 011 1 136 7889999999999999999999999999996 345 799999999999988
Q ss_pred Hhh
Q 013832 327 CRY 329 (435)
Q Consensus 327 ~~~ 329 (435)
...
T Consensus 144 ~~~ 146 (148)
T 3lv9_A 144 VGE 146 (148)
T ss_dssp HHT
T ss_pred hCc
Confidence 753
No 34
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.64 E-value=7.9e-16 Score=135.93 Aligned_cols=136 Identities=18% Similarity=0.253 Sum_probs=106.4
Q ss_pred HHHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChh
Q 013832 163 VSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEE 242 (435)
Q Consensus 163 i~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e 242 (435)
+.+||. .++.++|....++++++++.|+.+|+.+|.+++++++||+|. .++++|+||..|++..+...... .+
T Consensus 9 ~e~~l~-~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~-~~~lvGiit~~Di~~~~~~~~~~-----~~ 81 (156)
T 3k6e_A 9 FETFLL-GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLS-----QE 81 (156)
T ss_dssp HHHHHH-TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCC-----HH
T ss_pred HHHHhh-ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC-CCcEEEEEEecchhhhhhhcccc-----cc
Confidence 334443 456788877789999999999999999999999999999996 48999999999998876543211 11
Q ss_pred hhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhH
Q 013832 243 ELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGI 322 (435)
Q Consensus 243 ~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dI 322 (435)
.+...++ +.+|.++++++.+++++.+|+++|.++++ +||+| ++| +++||||.+||
T Consensus 82 ~~~~~~v-----------------~~im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd---~~g---~l~GiiT~~Di 136 (156)
T 3k6e_A 82 IMADTDI-----------------VHMTKTDVAVVSPDFTITEVLHKLVDESF--LPVVD---AEG---IFQGIITRKSI 136 (156)
T ss_dssp HHTTSBG-----------------GGTCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEEC---TTS---BEEEEEEHHHH
T ss_pred cccccCH-----------------HHhhcCCceecccccHHHHHHHHHHHcCC--eEEEe---cCC---EEEEEEEHHHH
Confidence 1111111 11478899999999999999999998764 99996 356 89999999999
Q ss_pred HHHHHhhh
Q 013832 323 LKCVCRYF 330 (435)
Q Consensus 323 l~~l~~~~ 330 (435)
++.+....
T Consensus 137 l~~~~~~~ 144 (156)
T 3k6e_A 137 LKAVNALL 144 (156)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 99987654
No 35
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.63 E-value=9e-16 Score=130.89 Aligned_cols=126 Identities=12% Similarity=0.155 Sum_probs=101.5
Q ss_pred CceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccH
Q 013832 170 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTI 249 (435)
Q Consensus 170 ~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i 249 (435)
.++.|+|....++++++++.|+.+|++.|.++++.++||+|.+.++++|+||..|++..+... ... ..
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~----~~~-----~~--- 69 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK----KEF-----TK--- 69 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS----SCC-----CH---
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc----Ccc-----ch---
Confidence 467788865567899999999999999999999999999986557999999999998765321 111 11
Q ss_pred HHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 250 SAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 250 ~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
..+++. | ++++++.+++++.+|++.|.+++++.+||+| ++| +++||+|..||++.+..
T Consensus 70 ~~v~~~--------------m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---~~g---~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 70 EIMLRA--------------A-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVD---EYG---DIQGLVTVEDILEEIVG 127 (130)
T ss_dssp HHHHHH--------------S-BCCCEEETTCBHHHHHHHHHHHCCCEEEEEC---TTS---CEEEEEEHHHHHHHHHC
T ss_pred hhHHHh--------------c-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEc---CCC---CEEEEeeHHHHHHHHhC
Confidence 112221 4 5678999999999999999999999999996 345 79999999999998764
No 36
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.63 E-value=3.3e-15 Score=129.96 Aligned_cols=121 Identities=15% Similarity=0.197 Sum_probs=96.8
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcc
Q 013832 272 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 351 (435)
Q Consensus 272 ~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt 351 (435)
.+++++.+++++.+|++.|.+++++++||+|. +| +++|+||.+||++++........ ......++.
T Consensus 25 ~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~~~--~~~~~~~v~------ 90 (150)
T 3lqn_A 25 EKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP---MY---KLHGLISTAMILDGILGLERIEF--ERLEEMKVE------ 90 (150)
T ss_dssp GGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHTBCSSSBCG--GGGGGCBGG------
T ss_pred CceEEECCCCcHHHHHHHHHHcCCcEEEEECC---CC---CEEEEEEHHHHHHHHHhhcccch--hHHhcCCHH------
Confidence 46889999999999999999999999999963 45 79999999999987653211000 001122333
Q ss_pred cccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcc
Q 013832 352 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA 414 (435)
Q Consensus 352 ~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~ 414 (435)
+.|.++++++.+++++.+|+++|.++++ +||||++|+++|+||++||++.+.+..
T Consensus 91 ------~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~ 145 (150)
T 3lqn_A 91 ------QVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKV 145 (150)
T ss_dssp ------GTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC
T ss_pred ------HHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHh
Confidence 3445688999999999999999999997 999999999999999999999877643
No 37
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.63 E-value=2.9e-15 Score=129.03 Aligned_cols=118 Identities=18% Similarity=0.305 Sum_probs=97.7
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
+|.++++++.+++++.+|++.|.+++++++||++++. .. +++|++|.+||++++..... ...++.++
T Consensus 10 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~-~~---~~~Givt~~dl~~~~~~~~~--------~~~~v~~~- 76 (141)
T 2rih_A 10 LLKRPPVSLPETATIREVATELAKNRVGLAVLTARDN-PK---RPVAVVSERDILRAVAQRLD--------LDGPAMPI- 76 (141)
T ss_dssp GCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTE-EE---EEEEEEEHHHHHHHHHTTCC--------TTSBSGGG-
T ss_pred HhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCC-cc---eeEEEEEHHHHHHHHhcCCC--------CCCCHHHH-
Confidence 4778899999999999999999999999999997311 11 49999999999987764311 12344443
Q ss_pred CcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 349 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 349 igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
|.++++++.++ ++.+|+++|.+++++++||||++|+++|+||++||++...
T Consensus 77 -----------m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 77 -----------ANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp -----------CBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred -----------cCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 33588999999 9999999999999999999999999999999999987544
No 38
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=4.5e-15 Score=131.62 Aligned_cols=117 Identities=15% Similarity=0.281 Sum_probs=98.9
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcc
Q 013832 272 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 351 (435)
Q Consensus 272 ~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt 351 (435)
++++++.+++++.+|++.|.+++++.+||++. +| +++|+||.+||++.+...... ....++.++
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~------~~~~~v~~~---- 98 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA---DG---VVLGIFTERDLVKAVAGQGAA------SLQQSVSVA---- 98 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHHHHGGG------GGTSBGGGT----
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---eEEEEEEHHHHHHHHHhcCCc------cccCCHHHH----
Confidence 46889999999999999999999999999963 45 799999999999988765211 112444444
Q ss_pred cccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 352 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 352 ~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
|.++++++.+++++.+|+++|.+++++++||||+ |+++|+||+.||++.+...
T Consensus 99 --------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 99 --------MTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp --------SBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC
T ss_pred --------hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 3357889999999999999999999999999998 9999999999999987654
No 39
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.62 E-value=3e-15 Score=132.17 Aligned_cols=125 Identities=18% Similarity=0.301 Sum_probs=99.8
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCC-Cccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS-SLPILKLPICAI 347 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~-~~~~~~~~v~~l 347 (435)
+|.++++++.+++++.+|++.|.+++++.+||+|. +| +++|+||.+||++++...+..... .......++.++
T Consensus 10 im~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~i 83 (160)
T 2o16_A 10 MMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA---NK---KLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEV 83 (160)
T ss_dssp TSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHHHCC---------CCCBHHHH
T ss_pred HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHH
Confidence 47778899999999999999999999999999962 45 799999999999987654321100 000112333333
Q ss_pred cCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 348 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 348 ~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
|.++++++.+++++.+|+++|.+++++++||||+ |+++|+||++||+..+..
T Consensus 84 ------------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 84 ------------MHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp ------------SCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred ------------hcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 3468899999999999999999999999999998 999999999999987654
No 40
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.62 E-value=3.4e-15 Score=128.41 Aligned_cols=126 Identities=18% Similarity=0.181 Sum_probs=97.8
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
.|.++++++.+++++.+|++.|.+++++++||++. +| +++|++|.+|+++++..... .....++.+++
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~------~~~~~~v~~~m 83 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NG---YLINVYEAYDVLGLIKGGIY------NDLSLSVGEAL 83 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHTC----------CCSBHHHHH
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC---CC---cEEEEEcHHHHHHHhccccc------ccCCccHHHHH
Confidence 36788999999999999999999999999999963 35 79999999999987754210 11234555543
Q ss_pred CcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 349 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 349 igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
..... ..++++++.+++++.+|+++|.+++++++||||++|+++|+||++||++.+..
T Consensus 84 ~~~~~------~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 84 MRRSD------DFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HHCC------------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred hcCcc------ccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 11000 00257899999999999999999999999999989999999999999987653
No 41
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.62 E-value=4.5e-15 Score=127.11 Aligned_cols=123 Identities=16% Similarity=0.326 Sum_probs=100.0
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
+|.++++++.+++++.+|++.|.+++++.+||+++ +| +++|++|.+|+++.+..... ....++.++
T Consensus 12 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~-------~~~~~v~~~- 77 (138)
T 2yzi_A 12 YMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND---DG---NVVGFFTKSDIIRRVIVPGL-------PYDIPVERI- 77 (138)
T ss_dssp TCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTCC-------CTTSBGGGT-
T ss_pred HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHhcCC-------cccCCHHHH-
Confidence 47788999999999999999999999999999962 45 79999999999743322100 112334333
Q ss_pred CcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccccc
Q 013832 349 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAH 417 (435)
Q Consensus 349 igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~~~ 417 (435)
|.++++++.+++++.+|+++|.+++++++ |||++|+++|+||+.||++.+.......
T Consensus 78 -----------m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~~~ 134 (138)
T 2yzi_A 78 -----------MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLETA 134 (138)
T ss_dssp -----------CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSCCC
T ss_pred -----------hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHHhh
Confidence 34578899999999999999999999999 9998899999999999999887655433
No 42
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.61 E-value=4e-15 Score=131.11 Aligned_cols=118 Identities=17% Similarity=0.305 Sum_probs=97.9
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
+|.++ +++.+++++.+|++.|.+++++.+||++. +| +++|+||.+||++.+.... .....++.+++
T Consensus 22 im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~-------~~~~~~v~~~m 87 (159)
T 3fv6_A 22 FQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDR---DA---VLVGVLSRKDLLRASIGQQ-------ELTSVPVHIIM 87 (159)
T ss_dssp SCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHTSCS-------CTTTCBGGGTS
T ss_pred HcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---cEEEEEeHHHHHHHhhccC-------cccCcCHHHHH
Confidence 46664 59999999999999999999999999963 45 7999999999998774321 11234444443
Q ss_pred CcccccccCCCCCC--CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCC---cEEEEEeHHHHHHHHhh
Q 013832 349 VGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDND---SLLDIYCRSDITALAKD 412 (435)
Q Consensus 349 igt~~~~~g~~~~~--~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g---~lvGiis~~DI~~~~~~ 412 (435)
.+ +++++.+++++.+|+++|.+++++++||||++| +++|+||++||++.+.+
T Consensus 88 ------------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 88 ------------TRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp ------------EETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred ------------cCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 33 788999999999999999999999999999888 99999999999987765
No 43
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.61 E-value=7.7e-15 Score=128.93 Aligned_cols=125 Identities=14% Similarity=0.201 Sum_probs=98.8
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcE-EEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcc-cCCC-------ccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVAT-VPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRH-CSSS-------LPI 339 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~-lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~-~~~~-------~~~ 339 (435)
+|.++++++.+++++.+|++.|.++++++ +||+++ + +++|++|.+||++++...+.. .... ...
T Consensus 21 im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~----~---~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (157)
T 1o50_A 21 LISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD----N---KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRL 93 (157)
T ss_dssp SSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET----T---EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCC
T ss_pred cccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC----C---EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHH
Confidence 48889999999999999999999999999 999973 2 599999999999886532100 0000 001
Q ss_pred cccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 340 LKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 340 ~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
...++. +.|.+ ++++.+++++.+|+++|.+++++++||||++|+++|+||++||++.+.+.
T Consensus 94 ~~~~v~------------~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 94 IAKNAS------------EIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp SSCBHH------------HHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHS
T ss_pred cCCcHH------------HHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 122233 33445 78999999999999999999999999999889999999999999877653
No 44
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.61 E-value=4.8e-15 Score=133.12 Aligned_cols=121 Identities=7% Similarity=0.095 Sum_probs=101.4
Q ss_pred cCC--CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccc
Q 013832 269 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 346 (435)
Q Consensus 269 ~~~--~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 346 (435)
+|+ .+++++.+++++.+|++.|.+++++++||++. ..+ +++|+||.+||++++.... ..++.
T Consensus 41 iM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~Dl~~~~~~~~----------~~~v~- 104 (173)
T 3ocm_A 41 IMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG--SLD---EVVGIGRAKDLVADLITEG----------RVRRN- 104 (173)
T ss_dssp TSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------SCCGG-
T ss_pred hCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---CEEEEEEHHHHHHHHhcCC----------cchhH-
Confidence 464 46889999999999999999999999999963 225 7999999999998876431 12333
Q ss_pred ccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccccC
Q 013832 347 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHI 418 (435)
Q Consensus 347 l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~~~l 418 (435)
+ + ++++++++++++.+|+++|.+++++.+||||++|+++|+||+.||+..+....+.+.
T Consensus 105 ~-----~--------~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~ 163 (173)
T 3ocm_A 105 R-----L--------RDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDED 163 (173)
T ss_dssp G-----S--------BCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCTT
T ss_pred h-----c--------CCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCcc
Confidence 1 1 478899999999999999999999999999999999999999999998887666543
No 45
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.61 E-value=3.4e-15 Score=127.74 Aligned_cols=118 Identities=17% Similarity=0.376 Sum_probs=97.7
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhH-HHHHHhhhcccCCCccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGI-LKCVCRYFRHCSSSLPILKLPICAI 347 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dI-l~~l~~~~~~~~~~~~~~~~~v~~l 347 (435)
+|.++++++.+++++.+|++.|.+++.+.+||+++ ++ +++|++|.+|+ ++++.... ....++.++
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~--------~~~~~v~~~ 78 (138)
T 2p9m_A 13 VMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD---EN---KVIGIVTTTDIGYNLIRDKY--------TLETTIGDV 78 (138)
T ss_dssp TSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT---TC---BEEEEEEHHHHHHHHTTTCC--------CSSCBHHHH
T ss_pred hhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC---CC---eEEEEEEHHHHHHHHHhhcc--------cCCcCHHHH
Confidence 47788999999999999999999999999999963 35 79999999999 87654311 113444444
Q ss_pred cCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcC-----CCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 348 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQ-----VSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 348 ~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~-----i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
+ .++++++.+++++.+|+++|.+++ ++++||+|++|+++|+||++||++.+.+
T Consensus 79 m------------~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 79 M------------TKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp S------------CSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred h------------CCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 2 357889999999999999999999 9999999989999999999999987654
No 46
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.60 E-value=1.5e-14 Score=133.56 Aligned_cols=123 Identities=14% Similarity=0.163 Sum_probs=103.0
Q ss_pred ccccCCCccCCCCceEeCCCCCHHHHHHHHHhc---CCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCc
Q 013832 261 RQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN---EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSL 337 (435)
Q Consensus 261 ~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~---~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~ 337 (435)
......|.+|+++++++.++.++.+|++.|.++ +++.+||++. .+ +++|++|.+|++.. .
T Consensus 51 ~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~-------~---- 113 (205)
T 3kxr_A 51 YSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE---AD---KYLGTVRRYDIFKH-------E---- 113 (205)
T ss_dssp SCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT---TC---BEEEEEEHHHHTTS-------C----
T ss_pred CCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC---CC---eEEEEEEHHHHHhC-------C----
Confidence 334455778999999999999999999999997 8999999963 45 89999999998631 0
Q ss_pred cccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcc
Q 013832 338 PILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA 414 (435)
Q Consensus 338 ~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~ 414 (435)
...++.++ |.++++++++++++.+|+++|.+++++++||||++|+++|+||+.||+..+....
T Consensus 114 --~~~~v~~i------------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 114 --PHEPLISL------------LSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp --TTSBGGGG------------CCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred --CcchHHHH------------hcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 12344444 3467899999999999999999999999999999999999999999999887654
No 47
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.60 E-value=4.6e-15 Score=129.02 Aligned_cols=138 Identities=18% Similarity=0.236 Sum_probs=107.8
Q ss_pred HHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhh
Q 013832 164 SVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEE 243 (435)
Q Consensus 164 ~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~ 243 (435)
.+.|...++.|+|....++++++++.|+.+|++.|.++++..+||+|+ +++++|+||..|++..+... .....+.
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~----~~~~~~~ 83 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP-MYKLHGLISTAMILDGILGL----ERIEFER 83 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHTBCS----SSBCGGG
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC-CCCEEEEEEHHHHHHHHHhh----cccchhH
Confidence 345677889999976567899999999999999999999999999996 48999999999998655311 1111111
Q ss_pred hhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHH
Q 013832 244 LETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGIL 323 (435)
Q Consensus 244 l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl 323 (435)
....++ +.+|.++++++.+++++.+|++.|.++++ +||++ ++| +++|+||..||+
T Consensus 84 ~~~~~v-----------------~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd---~~g---~~~Giit~~dil 138 (150)
T 3lqn_A 84 LEEMKV-----------------EQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN---EDG---YFEGILTRRAIL 138 (150)
T ss_dssp GGGCBG-----------------GGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC---TTC---BEEEEEEHHHHH
T ss_pred HhcCCH-----------------HHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC---CCC---cEEEEEEHHHHH
Confidence 111111 11377888999999999999999999987 99996 346 899999999999
Q ss_pred HHHHhhhc
Q 013832 324 KCVCRYFR 331 (435)
Q Consensus 324 ~~l~~~~~ 331 (435)
+++.....
T Consensus 139 ~~l~~~~~ 146 (150)
T 3lqn_A 139 KLLNKKVR 146 (150)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHhH
Confidence 99987653
No 48
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.60 E-value=6.9e-15 Score=125.54 Aligned_cols=115 Identities=16% Similarity=0.323 Sum_probs=95.2
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcc
Q 013832 272 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 351 (435)
Q Consensus 272 ~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt 351 (435)
++++++.+++++.+|++.|.+++++.+||++ +| +++|++|.+||++.+..... .....++.++
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~------~~~~~~v~~~---- 79 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK----DE---KLVGILTERDFSRKSYLLDK------PVKDTQVKEI---- 79 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHGGGSSS------CGGGSBGGGT----
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEehHHHHHHHHHcCC------CcccCCHHHh----
Confidence 6889999999999999999999999999995 34 79999999999865443210 0112334433
Q ss_pred cccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 352 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 352 ~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
|.++++++.+++++.+|+++|.+++++++||+| +|+++|+||++||++.+.+
T Consensus 80 --------m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 80 --------MTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp --------SBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred --------ccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 345788999999999999999999999999999 7999999999999987654
No 49
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.60 E-value=7.5e-15 Score=128.29 Aligned_cols=122 Identities=16% Similarity=0.197 Sum_probs=97.6
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcc
Q 013832 272 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 351 (435)
Q Consensus 272 ~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt 351 (435)
++++++.+++++.+|++.|.+++++.+||+++ +| +++|++|.+||++++..... .....++.+++...
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~vGivt~~dl~~~~~~~~~------~~~~~~v~~~m~~~ 96 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE---KG---RVVDIYSKFDVINLAAEKTY------NNLDVSVTKALQHR 96 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT---TS---BEEEEEEHHHHHHHHHCSSC------CCTTSBGGGGGGTC
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECC---CC---cEEEEEeHHHHHHHhcchhh------hhhcchHHHHHhhh
Confidence 67889999999999999999999999999963 45 79999999999987764310 01234454443100
Q ss_pred cccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 352 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 352 ~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
+.+.++++++.+++++.+|+++|.+++++++||||++|+++|+||++||++.+.
T Consensus 97 ------~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 97 ------SHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp ------CHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred ------hcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 001147889999999999999999999999999999899999999999998764
No 50
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.60 E-value=2.2e-15 Score=132.54 Aligned_cols=111 Identities=17% Similarity=0.257 Sum_probs=93.0
Q ss_pred cCCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccc
Q 013832 269 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 346 (435)
Q Consensus 269 ~~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 346 (435)
+|++ +++++.+++++.+|++.|.+++++++||++. +.+ +++|++|.+|+++.+... ...++.+
T Consensus 43 iM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~----------~~~~v~~ 107 (156)
T 3oi8_A 43 AMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE--DKD---EVLGILHAKDLLKYMFNP----------EQFHLKS 107 (156)
T ss_dssp TCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGSSCG----------GGCCHHH
T ss_pred eeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHcC----------CcccHHH
Confidence 5664 7889999999999999999999999999963 224 699999999997654321 1244444
Q ss_pred ccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHH
Q 013832 347 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDIT 407 (435)
Q Consensus 347 l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~ 407 (435)
++ ++++++++++++.+|+++|.+++++.+||||++|+++|+||+.||+
T Consensus 108 im-------------~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 108 IL-------------RPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp HC-------------BCCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred Hc-------------CCCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 42 2578999999999999999999999999999999999999999985
No 51
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.60 E-value=6.5e-15 Score=131.73 Aligned_cols=127 Identities=15% Similarity=0.218 Sum_probs=103.7
Q ss_pred hccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 167 LSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 167 l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
|...++.|+|....++++++++.|+.+|++.|.++++..+||+|.+.++++|+||..|++..+.... ..
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~------- 107 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE----RL------- 107 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC----CC-------
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC----cc-------
Confidence 5678899999765788999999999999999999999999999964479999999999987654210 00
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l 326 (435)
++ + .+| ++++++.+++++.+|+++|.+++++.+||+| +.| +++||||..||++.+
T Consensus 108 -~v---~--------------~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~g---~lvGiit~~Dil~~l 162 (172)
T 3lhh_A 108 -EL---V--------------DLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD---EYG---DLKGLVTLQDMMDAL 162 (172)
T ss_dssp -CG---G--------------GGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHH
T ss_pred -cH---H--------------HHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe---CCC---CEEEEeeHHHHHHHH
Confidence 11 1 137 7889999999999999999999999999996 345 799999999999998
Q ss_pred Hhh
Q 013832 327 CRY 329 (435)
Q Consensus 327 ~~~ 329 (435)
...
T Consensus 163 ~~~ 165 (172)
T 3lhh_A 163 TGE 165 (172)
T ss_dssp HTT
T ss_pred hCC
Confidence 754
No 52
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.59 E-value=3e-15 Score=131.11 Aligned_cols=127 Identities=17% Similarity=0.232 Sum_probs=104.6
Q ss_pred hccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeee-eCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhh
Q 013832 167 LSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLW-DFSKARFVGVLSASDFILILRELGNHGSNLTEEELE 245 (435)
Q Consensus 167 l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~-D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~ 245 (435)
|...++.++|....++++++++.|+.+|++.|.++++..+||+ |.+.++++|+||..|++..+.....
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~~----------- 85 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDDK----------- 85 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHTT-----------
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCCC-----------
Confidence 4567888888654578899999999999999999999999999 6444799999999999876643210
Q ss_pred hccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHH
Q 013832 246 THTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 325 (435)
Q Consensus 246 ~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~ 325 (435)
.++ +.+| ++++++.+++++.+|+.+|.+++++++||++ +.| +++||||..||++.
T Consensus 86 -~~v-----------------~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd---~~g---~~vGivt~~dil~~ 140 (153)
T 3oco_A 86 -AKI-----------------STIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID---EYG---GTSGIITDKDVYEE 140 (153)
T ss_dssp -SBG-----------------GGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC---TTS---CEEEEECHHHHHHH
T ss_pred -CcH-----------------HHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe---CCC---CEEEEeeHHHHHHH
Confidence 011 1136 7889999999999999999999999999996 345 79999999999999
Q ss_pred HHhh
Q 013832 326 VCRY 329 (435)
Q Consensus 326 l~~~ 329 (435)
+...
T Consensus 141 l~~~ 144 (153)
T 3oco_A 141 LFGN 144 (153)
T ss_dssp HHC-
T ss_pred Hhcc
Confidence 8754
No 53
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.59 E-value=1.8e-15 Score=128.12 Aligned_cols=124 Identities=12% Similarity=0.267 Sum_probs=98.0
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhcc
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHT 248 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~ 248 (435)
..++.|+|....++++++++.|+.+|++.|.++++..+||+|.+.++++|++|..|++..+.. ... ..+
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~---~~~--------~~~ 70 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS---DAE--------AFS 70 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST---TCC--------CCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc---cCC--------CCC
Confidence 356777886545688999999999999999999999999999654799999999998764421 100 111
Q ss_pred HHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHH
Q 013832 249 ISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVC 327 (435)
Q Consensus 249 i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~ 327 (435)
+ ++. |. +++++.+++++.+|+++|.+++++++||+| +.| +++|+||.+||++.+.
T Consensus 71 v---~~~--------------m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 71 M---DKV--------------LR-TAVVVPESKRVDRMLKEFRSQRYHMAIVID---EFG---GVSGLVTIEDILELIV 125 (127)
T ss_dssp H---HHH--------------CB-CCCEEETTCBHHHHHHHHHHTTCCEEEEEC---TTS---CEEEEEEHHHHHHHC-
T ss_pred H---HHH--------------cC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe---CCC---CEEEEEEHHHHHHHHh
Confidence 2 221 43 367899999999999999999999999996 345 7999999999998764
No 54
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.59 E-value=5.9e-15 Score=133.34 Aligned_cols=120 Identities=14% Similarity=0.206 Sum_probs=99.6
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
+|.++++++.+++++.+|+++|.+++++++||++. +| +++|++|.+||++++..... .....++.++
T Consensus 14 im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~---~g---~~vGivt~~dl~~~~~~~~~------~~~~~~v~~i- 80 (184)
T 1pvm_A 14 IMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD---NG---NDVGLLSERSIIKRFIPRNK------KPDEVPIRLV- 80 (184)
T ss_dssp TSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT---TS---CEEEEEEHHHHHHHTGGGCC------CGGGSBGGGT-
T ss_pred hcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHhhccc------CcccCCHHHH-
Confidence 47788999999999999999999999999999963 35 79999999999987653210 0112333333
Q ss_pred CcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 349 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 349 igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
|.++++++.+++++.+|+++|.+++++.+||||++|+++|+||+.||++.+..
T Consensus 81 -----------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 81 -----------MRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp -----------SBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred -----------hCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 34578899999999999999999999999999988999999999999986655
No 55
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.59 E-value=7.3e-15 Score=127.90 Aligned_cols=114 Identities=17% Similarity=0.239 Sum_probs=96.1
Q ss_pred cCCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccc
Q 013832 269 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 346 (435)
Q Consensus 269 ~~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 346 (435)
+|.+ +++++.+++++.+|++.|.+++++.+||++. +| +++|+||.+||++.+.... .....++.+
T Consensus 33 im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~-------~~~~~~v~~ 99 (149)
T 3k2v_A 33 IMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD---DM---NIIGIFTDGDLRRVFDTGV-------DMRDASIAD 99 (149)
T ss_dssp TSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT---TC---BEEEEEEHHHHHHHHCSSS-------CCTTCBHHH
T ss_pred HhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---cEEEEecHHHHHHHHhcCC-------CcccCcHHH
Confidence 4777 8999999999999999999999999999963 45 7999999999998776431 112345555
Q ss_pred ccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHH
Q 013832 347 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA 408 (435)
Q Consensus 347 l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~ 408 (435)
++ .++++++.+++++.+|+++|.+++++++||+|++ +++|+||+.||++
T Consensus 100 ~m------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 100 VM------------TRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp HS------------EESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred Hc------------CCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 43 2477899999999999999999999999999976 9999999999874
No 56
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.59 E-value=1.1e-15 Score=132.63 Aligned_cols=124 Identities=15% Similarity=0.237 Sum_probs=96.3
Q ss_pred cCCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhc--------ccCCCcc
Q 013832 269 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFR--------HCSSSLP 338 (435)
Q Consensus 269 ~~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~--------~~~~~~~ 338 (435)
+|.+ +++++.+++++.+|++.|.+++++.+||++. ++ +++|++|.+||++++..... ... ..
T Consensus 10 im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~--~~ 81 (152)
T 4gqw_A 10 FMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE---DW---KLVGLVSDYDLLALDSGDSTWKTFNAVQKLL--SK 81 (152)
T ss_dssp TSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHTTCC----CCHHHHHHHTC-----
T ss_pred ccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC---CC---eEEEEEEHHHHHHhhcccCcccchHHHHHHH--HH
Confidence 3655 7899999999999999999999999999963 45 79999999999764331100 000 00
Q ss_pred ccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 339 ILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 339 ~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
....++.++ |.++++++.+++++.+|+++|.+++++++||||++|+++|+||++||++.+.+
T Consensus 82 ~~~~~v~~~------------m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 82 TNGKLVGDL------------MTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp --CCBHHHH------------SEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred hccccHHHh------------cCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 112333333 33467889999999999999999999999999999999999999999987664
No 57
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.58 E-value=3.1e-15 Score=138.79 Aligned_cols=161 Identities=12% Similarity=0.211 Sum_probs=96.7
Q ss_pred ceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHH
Q 013832 171 TAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTIS 250 (435)
Q Consensus 171 ~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~ 250 (435)
+|.+.|. .++++++++.|+.+|+++|.++++..+||+|+ +++++|+||..|+...+. ...+
T Consensus 14 ~~~~~~~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~l~Givt~~dl~~~~~---------------~~~v- 74 (213)
T 1vr9_A 14 KVKKWVT--QDFPMVEESATVRECLHRMRQYQTNECIVKDR-EGHFRGVVNKEDLLDLDL---------------DSSV- 74 (213)
T ss_dssp BGGGGCB--SCSCEEETTCBHHHHHHHHHHTTSSEEEEECT-TSBEEEEEEGGGGTTSCT---------------TSBS-
T ss_pred CHHHhhc--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcC-CCEEEEEEEHHHHHhhcC---------------CCcH-
Confidence 5556663 46789999999999999999999999999996 489999999999753210 0011
Q ss_pred HHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhh
Q 013832 251 AWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYF 330 (435)
Q Consensus 251 ~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~ 330 (435)
+ .+|.++++++.+++++.+|+++|.+++++++||+++ +| +++|+||.+||++.+....
T Consensus 75 --~--------------~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~lvGiit~~Dil~~~~~~~ 132 (213)
T 1vr9_A 75 --F--------------NKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDE---EM---RLKGAVSLHDFLEALIEAL 132 (213)
T ss_dssp --G--------------GGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECT---TC---BEEEEEEHHHHHHHHHHSC
T ss_pred --H--------------HHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHHHh
Confidence 1 137788999999999999999999999999999962 35 8999999999998876432
Q ss_pred cccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCC
Q 013832 331 RHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDND 395 (435)
Q Consensus 331 ~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g 395 (435)
.. .+. ++.. .+.+.....++.+|.++|.+++++.++|++.+|
T Consensus 133 ~~------------~~~--~~~l---------~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 133 AM------------DVP--GIRF---------SVLLEDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp C----------------------------------------------------------------
T ss_pred cC------------CCC--cEEE---------EEEeCCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 10 000 0000 011113334599999999999999999986544
No 58
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.58 E-value=2.4e-15 Score=127.97 Aligned_cols=116 Identities=17% Similarity=0.300 Sum_probs=95.3
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHH-HHHhhhcccCCCcccccccccccc
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK-CVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~-~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
|.++++++.+++++.+|++.|.+++++++||+|+ ++ +++|++|.+|+++ ++..... ....++.+++
T Consensus 14 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~-------~~~~~v~~~m 80 (133)
T 1y5h_A 14 MNAGVTCVGEHETLTAAAQYMREHDIGALPICGD---DD---RLHGMLTDRDIVIKGLAAGLD-------PNTATAGELA 80 (133)
T ss_dssp SEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG---GG---BEEEEEEHHHHHHTTGGGTCC-------TTTSBHHHHH
T ss_pred hcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC---CC---eEEEEEeHHHHHHHHHhcCCC-------ccccCHHHHh
Confidence 6678889999999999999999999999999963 35 7999999999984 4432210 1123444442
Q ss_pred CcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 349 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 349 igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
.++++++.+++++.+|+++|.+++++++||+|+ |+++|+||++||++.+.
T Consensus 81 ------------~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 81 ------------RDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLP 130 (133)
T ss_dssp ------------TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC
T ss_pred ------------cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 357889999999999999999999999999997 99999999999997654
No 59
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.58 E-value=2.5e-15 Score=127.69 Aligned_cols=124 Identities=17% Similarity=0.317 Sum_probs=99.8
Q ss_pred ccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhc
Q 013832 168 STHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETH 247 (435)
Q Consensus 168 ~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~ 247 (435)
...++.|+|....++++++++.|+.+|++.|.++++.++||+|.+.++++|+||..|++..+. .. . .
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~---~~--~--------~ 69 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML---EP--A--------L 69 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT---CT--T--------S
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc---cC--C--------c
Confidence 356778888755678899999999999999999999999999964479999999999875432 10 0 0
Q ss_pred cHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHH
Q 013832 248 TISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVC 327 (435)
Q Consensus 248 ~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~ 327 (435)
.+ ++ +|. +++++.+++++.+|+++|.+++++.+||+| +.| +++|+||..||++.+.
T Consensus 70 ~v---~~--------------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd---~~g---~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 70 DI---RS--------------LVR-PAVFIPEVKRLNVLLREFRASRNHLAIVID---EHG---GISGLVTMEDVLEQIV 125 (129)
T ss_dssp CG---GG--------------GCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEEC---C-C---CEEEEEEHHHHHHHHH
T ss_pred CH---HH--------------HhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEe---CCC---CEEEEEEHHHHHHHHh
Confidence 11 11 243 478999999999999999999999999996 345 7999999999999887
Q ss_pred h
Q 013832 328 R 328 (435)
Q Consensus 328 ~ 328 (435)
.
T Consensus 126 g 126 (129)
T 3jtf_A 126 G 126 (129)
T ss_dssp H
T ss_pred C
Confidence 5
No 60
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.58 E-value=1.4e-14 Score=126.96 Aligned_cols=119 Identities=13% Similarity=0.212 Sum_probs=99.3
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcc
Q 013832 272 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 351 (435)
Q Consensus 272 ~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt 351 (435)
++++++.+++++.+|++.|.+++++.+||.+ +| +++|++|.+||++++...... ....++.+++
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~----~~---~~~Givt~~dl~~~~~~~~~~------~~~~~v~~~m--- 84 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVD----GD---DIAGIVTERDYARKVVLQERS------SKATRVEEIM--- 84 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEES----SS---SEEEEEEHHHHHHHSGGGTCC------SSSCBHHHHS---
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEee----CC---EEEEEEEHHHHHHHHHhccCC------ccccCHHHHc---
Confidence 6678999999999999999999999999963 35 799999999999887654211 1234455442
Q ss_pred cccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccc
Q 013832 352 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYA 416 (435)
Q Consensus 352 ~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~~ 416 (435)
.++++++.+++++.+|+++|.+++++++||+| +|+++|+||++||++.+......
T Consensus 85 ---------~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~~ 139 (157)
T 4fry_A 85 ---------TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQF 139 (157)
T ss_dssp ---------BSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCC
T ss_pred ---------CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHHh
Confidence 35788999999999999999999999999999 79999999999999988765543
No 61
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.57 E-value=6.3e-15 Score=131.71 Aligned_cols=126 Identities=19% Similarity=0.270 Sum_probs=96.0
Q ss_pred CCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhccc---------CCCc-
Q 013832 270 FPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHC---------SSSL- 337 (435)
Q Consensus 270 ~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~---------~~~~- 337 (435)
|.+ +++++.+++++.+|++.|.+++++++||++. ++ +++|+||.+||++++....... ....
T Consensus 10 m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (180)
T 3sl7_A 10 MTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD---NW---TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 83 (180)
T ss_dssp SEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHTCC-------------------CCC
T ss_pred cCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---eEEEEEEHHHHHhhhhhccccCCcccccccccchhh
Confidence 555 7899999999999999999999999999963 45 7999999999986432110000 0000
Q ss_pred ----------cccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHH
Q 013832 338 ----------PILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDIT 407 (435)
Q Consensus 338 ----------~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~ 407 (435)
.....++. +.|.++++++.+++++.+|+++|.+++++++||||++|+++|+||++||+
T Consensus 84 ~~~~~~~~~~~~~~~~v~------------~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil 151 (180)
T 3sl7_A 84 TFNELQKLISKTYGKVVG------------DLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVV 151 (180)
T ss_dssp SHHHHHHHHHTTTTCBHH------------HHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHH
T ss_pred hhHHHHHHHhccccccHH------------HHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHH
Confidence 00112222 33445788999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 013832 408 ALAKDK 413 (435)
Q Consensus 408 ~~~~~~ 413 (435)
+.+...
T Consensus 152 ~~~~~~ 157 (180)
T 3sl7_A 152 RAALQI 157 (180)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877653
No 62
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.57 E-value=6.1e-15 Score=129.18 Aligned_cols=121 Identities=16% Similarity=0.218 Sum_probs=97.8
Q ss_pred CC--CCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccc
Q 013832 270 FP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 347 (435)
Q Consensus 270 ~~--~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l 347 (435)
|. ++++++.+++++.+|++.|.+++++++||++. +| +++|++|.+||++++....... ..+...++.++
T Consensus 21 m~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~dl~~~~~~~~~~~---~~~~~~~v~~~ 91 (156)
T 3ctu_A 21 LTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADTDIVHM 91 (156)
T ss_dssp EEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTSBGGGG
T ss_pred cCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC---CC---EEEEEEcHHHHHHHHHhccccc---cccccCcHHHh
Confidence 55 67899999999999999999999999999963 45 7999999999999887531100 01112344443
Q ss_pred cCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 348 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 348 ~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
|.++++++.+++++.+|+++|.+++ ++||||++|+++|+||++||++.+.+.
T Consensus 92 ------------m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 92 ------------TKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp ------------CBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHH
T ss_pred ------------ccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 3357889999999999999999886 799999999999999999999988754
No 63
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.57 E-value=1.8e-14 Score=129.30 Aligned_cols=127 Identities=14% Similarity=0.129 Sum_probs=106.1
Q ss_pred hccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 167 LSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 167 l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
|...++.++|....++++++++.|+.+|++.|.++++.++||+|.+.++++|+||..|++..+..... .
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~~----~------- 101 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGR----V------- 101 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSS----C-------
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCCc----c-------
Confidence 46789999997666889999999999999999999999999998654799999999999876643210 0
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l 326 (435)
.+ . |.++++++.+++++.+|+.+|.+++++.+||+| +.| +++||||..||++.+
T Consensus 102 -~v-----------------~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd---e~g---~lvGiIT~~Dil~~l 155 (173)
T 3ocm_A 102 -RR-----------------N--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD---EFG---AIEGLVTPIDVFEAI 155 (173)
T ss_dssp -CG-----------------G--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC---TTC---CEEEEECHHHHHHHH
T ss_pred -hh-----------------H--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe---CCC---CEEEEEeHHHHHHHH
Confidence 11 0 125678999999999999999999999999996 345 799999999999998
Q ss_pred Hhhh
Q 013832 327 CRYF 330 (435)
Q Consensus 327 ~~~~ 330 (435)
...+
T Consensus 156 ~~~i 159 (173)
T 3ocm_A 156 AGEF 159 (173)
T ss_dssp HCCC
T ss_pred hCcC
Confidence 8543
No 64
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.56 E-value=2e-14 Score=125.72 Aligned_cols=123 Identities=15% Similarity=0.236 Sum_probs=97.4
Q ss_pred cCCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccc
Q 013832 269 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 346 (435)
Q Consensus 269 ~~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~ 346 (435)
+|.+ +++++.+++++.+|++.|.+++++++||++. +| +++|++|.+||++++...... ........++.
T Consensus 16 im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~--~~~~~~~~~v~- 86 (157)
T 2emq_A 16 FLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT---SY---KLHGLISMTMMMDAILGLERI--EFERLETMKVE- 86 (157)
T ss_dssp TCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT---TC---CEEEEEEHHHHHHHSBCSSSB--CGGGGGTCBGG-
T ss_pred hccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC---CC---CEEEEeeHHHHHHHHhccccc--chHHhcCCcHH-
Confidence 4654 7889999999999999999999999999963 45 799999999998765431100 00001122333
Q ss_pred ccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 347 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 347 l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
+.|.++++++.+++++.+|+++|.++++ +||||++|+++|+||++||++.+...
T Consensus 87 -----------~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 87 -----------EVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp -----------GTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHT
T ss_pred -----------HHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 3344688999999999999999999988 99999999999999999999987754
No 65
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.56 E-value=2.6e-14 Score=121.52 Aligned_cols=128 Identities=13% Similarity=0.266 Sum_probs=103.4
Q ss_pred hccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 167 LSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 167 l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
|+..++.++|.. ++++++++.|+.+|++.|.++++..+||+| +++++|++|..|++..+...... .
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~~----------~ 66 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD--GNKPVGIITERDIVKAIGKGKSL----------E 66 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTTCCT----------T
T ss_pred CCcccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEcHHHHHHHHhcCCCc----------c
Confidence 356788888854 578999999999999999999999999999 48999999999998765421110 0
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l 326 (435)
.++ . .+|.++++++.+++++.+|++.|.+++++++||++. +| +++|+||..||++.+
T Consensus 67 ~~v---~--------------~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---~g---~~~Giit~~dll~~~ 123 (133)
T 2ef7_A 67 TKA---E--------------EFMTASLITIREDSPITGALALMRQFNIRHLPVVDD---KG---NLKGIISIRDITRAI 123 (133)
T ss_dssp CBG---G--------------GTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHH
T ss_pred cCH---H--------------HHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECC---CC---eEEEEEEHHHHHHHH
Confidence 011 1 136678889999999999999999999999999962 45 799999999999998
Q ss_pred Hhhhc
Q 013832 327 CRYFR 331 (435)
Q Consensus 327 ~~~~~ 331 (435)
...+.
T Consensus 124 ~~~~~ 128 (133)
T 2ef7_A 124 DDMFE 128 (133)
T ss_dssp HHHC-
T ss_pred HHHHH
Confidence 87643
No 66
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.56 E-value=1.6e-14 Score=126.47 Aligned_cols=136 Identities=16% Similarity=0.223 Sum_probs=107.5
Q ss_pred hhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhh
Q 013832 166 FLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELE 245 (435)
Q Consensus 166 ~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~ 245 (435)
.|...++.|+|....++++++++.|+.+|++.|.++++..+||+|+ +++++|+||..|++..+..... ....+.
T Consensus 11 ~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~-----~~~~~~ 84 (156)
T 3ctu_A 11 TFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDL-----SQEIMA 84 (156)
T ss_dssp HHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTC-----CHHHHT
T ss_pred HHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC-CCEEEEEEcHHHHHHHHHhccc-----cccccc
Confidence 3445678899987778999999999999999999999999999996 4899999999999887754211 011111
Q ss_pred hccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHH
Q 013832 246 THTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 325 (435)
Q Consensus 246 ~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~ 325 (435)
..++ +.+|.++++++.+++++.+|+..|.+++ ++||++ ++| +++|+||.+||+++
T Consensus 85 ~~~v-----------------~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd---~~g---~~~Giit~~dil~~ 139 (156)
T 3ctu_A 85 DTDI-----------------VHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD---AEG---IFQGIITRKSILKA 139 (156)
T ss_dssp TSBG-----------------GGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC---TTS---BEEEEEETTHHHHH
T ss_pred cCcH-----------------HHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc---CCC---eEEEEEEHHHHHHH
Confidence 1111 1137788899999999999999999886 799996 346 89999999999999
Q ss_pred HHhhhcc
Q 013832 326 VCRYFRH 332 (435)
Q Consensus 326 l~~~~~~ 332 (435)
+......
T Consensus 140 l~~~~~~ 146 (156)
T 3ctu_A 140 VNALLHD 146 (156)
T ss_dssp HHHHSCC
T ss_pred HHHHHHh
Confidence 9877544
No 67
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.56 E-value=1.8e-14 Score=126.74 Aligned_cols=129 Identities=12% Similarity=0.160 Sum_probs=98.5
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|.++++++.+++++.+|++.|.+++++++||+++ +++| +++|++|.+||++++....... .+....++.+++.
T Consensus 19 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~-~~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~~~v~~~m~ 91 (164)
T 2pfi_A 19 MNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES-TESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQQCLQDILA 91 (164)
T ss_dssp CBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHC----------CCCCBHHHHHH
T ss_pred cCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec-CCCC---EEEEEEEHHHHHHHHHhhcccc---CCcccchhhhhhc
Confidence 7788999999999999999999999999999963 1245 8999999999998875432110 0111234444432
Q ss_pred cccccccCCCCCCC-ceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 350 GTWVPKIGEPNRRP-LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 350 gt~~~~~g~~~~~~-v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
... ...+ ++++.+++++.+|+++|.+++++++|||| +|+++|+||++||++.+.+.
T Consensus 92 ~~~-------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~ 148 (164)
T 2pfi_A 92 RGC-------PTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNL 148 (164)
T ss_dssp TTC-------CCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred ccc-------cccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhh
Confidence 110 0112 67899999999999999999999999999 79999999999999887654
No 68
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.56 E-value=2e-14 Score=126.63 Aligned_cols=140 Identities=14% Similarity=0.239 Sum_probs=109.9
Q ss_pred HHHHHHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCC
Q 013832 160 RHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNL 239 (435)
Q Consensus 160 ~~~i~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l 239 (435)
...+.+.|...++.|+|.. .++++++.++.+|++.|.++++..+||+|++ ++++|+||..|++..+.. .. .
T Consensus 7 ~~~l~~~l~~~~v~~im~~---~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~---~~-~- 77 (159)
T 3fv6_A 7 TQLLADKLKKLQVKDFQSI---PVVIHENVSVYDAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIG---QQ-E- 77 (159)
T ss_dssp CHHHHHHHTTCBGGGSCBC---CCEEETTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTS---CS-C-
T ss_pred HHHHHHHHhhCCHHHHcCC---CEEECCCCcHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhc---cC-c-
Confidence 3567888999999999963 4599999999999999999999999999964 899999999999876521 10 0
Q ss_pred ChhhhhhccHHHHHHHHHhhcccccCCCccCCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEee
Q 013832 240 TEEELETHTISAWKEGKAYLNRQIDSHGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIA 317 (435)
Q Consensus 240 ~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGii 317 (435)
....++ .+ +|.+ +++++.+++++.+|+++|.+++++++||++++.... +++|+|
T Consensus 78 ----~~~~~v---~~--------------~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~---~~vGii 133 (159)
T 3fv6_A 78 ----LTSVPV---HI--------------IMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGF---EVIGRV 133 (159)
T ss_dssp ----TTTCBG---GG--------------TSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSE---EEEEEE
T ss_pred ----ccCcCH---HH--------------HHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcce---eEEEEE
Confidence 011111 11 2555 788999999999999999999999999997421111 599999
Q ss_pred eHHhHHHHHHhhhcc
Q 013832 318 SLSGILKCVCRYFRH 332 (435)
Q Consensus 318 T~~dIl~~l~~~~~~ 332 (435)
|.+||++++......
T Consensus 134 t~~dil~~l~~~~~~ 148 (159)
T 3fv6_A 134 TKTNMTKILVSLSEN 148 (159)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred EHHHHHHHHHHHhhc
Confidence 999999999876543
No 69
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.56 E-value=2e-15 Score=129.59 Aligned_cols=126 Identities=13% Similarity=0.236 Sum_probs=98.7
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhcc
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHT 248 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~ 248 (435)
..++.|+|....++++++++.|+.+|++.|.++++.++||+|.+.++++|+||..|++..+.. .. ....+
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~---~~-------~~~~~ 71 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK---AD-------GDSDD 71 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS---SS-------GGGCC
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh---cc-------CCCcC
Confidence 456778886556789999999999999999999999999999654799999999998764321 00 00011
Q ss_pred HHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 249 ISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 249 i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
+ + .+|.+ ++++.+++++.+|+.+|.+++++.+||+| +.| +++||||.+||++.+..
T Consensus 72 v---~--------------~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---~~g---~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 72 V---K--------------KLLRP-ATFVPESKRLNVLLREFRANHNHMAIVID---EYG---GVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp G---G--------------GTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEEC---TTS---CEEEEEEHHHHHTTC--
T ss_pred H---H--------------HHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEe---CCC---CEEEEEEHHHHHHHHhC
Confidence 1 1 12544 78999999999999999999999999996 345 79999999999987654
No 70
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.55 E-value=4.4e-14 Score=134.34 Aligned_cols=139 Identities=10% Similarity=0.072 Sum_probs=100.8
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCC-------------
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS------------- 335 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~------------- 335 (435)
+|+++++++.+++++.+|+++|.+++++++||+++ .+.+ +++|+||++||++++.........
T Consensus 18 iMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~~ 93 (250)
T 2d4z_A 18 IMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEGR 93 (250)
T ss_dssp SSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC--
T ss_pred hcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccccccc
Confidence 58999999999999999999999999999999973 2235 799999999999987654211000
Q ss_pred --------------Cccccccc--------------------------------------------------cccccC--
Q 013832 336 --------------SLPILKLP--------------------------------------------------ICAIPV-- 349 (435)
Q Consensus 336 --------------~~~~~~~~--------------------------------------------------v~~l~i-- 349 (435)
...++... ..++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 173 (250)
T 2d4z_A 94 NGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLTL 173 (250)
T ss_dssp -------------------------------------------------------------------------CCSCCBH
T ss_pred ccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccCh
Confidence 00000000 000000
Q ss_pred ---cc-----ccccc--C-CCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 350 ---GT-----WVPKI--G-EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 350 ---gt-----~~~~~--g-~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
.. ....+ . ..|....+++.++++|.+|..+|.+.+++++||++ +|+|+||||+.||++++..
T Consensus 174 ~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 174 EEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred hhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 00 00011 1 23556788999999999999999999999999998 6999999999999998874
No 71
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.55 E-value=1.8e-14 Score=120.48 Aligned_cols=119 Identities=18% Similarity=0.333 Sum_probs=97.4
Q ss_pred ceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHH
Q 013832 171 TAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTIS 250 (435)
Q Consensus 171 ~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~ 250 (435)
++.++|.. ++++++++.++.+|++.|.++++..+||+|+ +++++|++|..|++..+..... ++
T Consensus 2 ~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~~~-------------~v- 64 (122)
T 3kpb_A 2 LVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDE-HGKLVGIITSWDIAKALAQNKK-------------TI- 64 (122)
T ss_dssp BHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECT-TSBEEEEECHHHHHHHHHTTCC-------------BG-
T ss_pred chHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECC-CCCEEEEEEHHHHHHHHHhccc-------------CH-
Confidence 45566643 6789999999999999999999999999995 4899999999999876542110 11
Q ss_pred HHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 251 AWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 251 ~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
. .+|.++++++.+++++.+|++.|.+++++++||++ ++| +++|++|..||++++..
T Consensus 65 --~--------------~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd---~~g---~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 65 --E--------------EIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVD---DYR---RVVGIVTSEDISRLFGG 120 (122)
T ss_dssp --G--------------GTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHHC-
T ss_pred --H--------------HHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEEC---CCC---CEEEEEeHHHHHHHhhc
Confidence 1 13667888999999999999999999999999996 245 89999999999998764
No 72
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=1.4e-14 Score=128.43 Aligned_cols=130 Identities=17% Similarity=0.231 Sum_probs=104.5
Q ss_pred hccCceecccCCC-CCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhh
Q 013832 167 LSTHTAYELLPES-GKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELE 245 (435)
Q Consensus 167 l~~~~~~dl~p~s-~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~ 245 (435)
|...++.|+|... .++++++++.|+.+|++.|.++++..+||+|++ ++++|+||..|++..+...... ..
T Consensus 21 l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~--------~~ 91 (165)
T 3fhm_A 21 GMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAA--------SL 91 (165)
T ss_dssp SSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGG--------GG
T ss_pred hhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCc--------cc
Confidence 4456777777542 468899999999999999999999999999964 8999999999998876543210 00
Q ss_pred hccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHH
Q 013832 246 THTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 325 (435)
Q Consensus 246 ~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~ 325 (435)
..++ +.+|.++++++.+++++.+|+++|.+++++++||++ + | +++|+||..||+++
T Consensus 92 ~~~v-----------------~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~-g---~~~Giit~~dil~~ 147 (165)
T 3fhm_A 92 QQSV-----------------SVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE---N-G---RLAGIISIGDVVKA 147 (165)
T ss_dssp TSBG-----------------GGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHHH
T ss_pred cCCH-----------------HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE---C-C---EEEEEEEHHHHHHH
Confidence 0111 113678889999999999999999999999999996 3 5 89999999999998
Q ss_pred HHhh
Q 013832 326 VCRY 329 (435)
Q Consensus 326 l~~~ 329 (435)
+...
T Consensus 148 ~~~~ 151 (165)
T 3fhm_A 148 RIGE 151 (165)
T ss_dssp TTCC
T ss_pred HHHH
Confidence 7654
No 73
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.55 E-value=4.7e-15 Score=160.84 Aligned_cols=81 Identities=12% Similarity=0.206 Sum_probs=68.6
Q ss_pred CCceeeEEEEecC--CCcEEEEEeecCCCCCC-CCCccccCCCCeEEEEEEcCCceEEEEEEECCeee--cCCCCC---e
Q 013832 22 DTVLIPMRFVWPY--GGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWR--HDEHQP---F 93 (435)
Q Consensus 22 ~~~~~~~~f~w~~--~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~--~d~~~~---~ 93 (435)
....++|+|+++. +|++|+|+||||+|++. .+|.+. +|.|+++++||||+|||||+|||+|+ +||++| +
T Consensus 14 ~~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~~---~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~~~~~~y 90 (696)
T 4aee_A 14 RKGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKI---EEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKKC 90 (696)
T ss_dssp EEEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEEE---TTEEEEEEEECSEEEEEEEEETTCCSCCCCTTCCCEEE
T ss_pred CCCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEec---CCeEEEEEEcCCceEEEEEEECCEEeecCCCCCCcccc
Confidence 3445666666654 79999999999999765 578763 79999999999999999999999999 788886 5
Q ss_pred eeCCCCCeeeEE
Q 013832 94 ISSEYGIVNTVL 105 (435)
Q Consensus 94 ~~d~~G~~nnvl 105 (435)
+.|++|..|+|.
T Consensus 91 ~~~~~g~~n~~~ 102 (696)
T 4aee_A 91 VHTSFFPEYKKC 102 (696)
T ss_dssp EECSSCTTSEEE
T ss_pred cccCCcccccee
Confidence 789999999985
No 74
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.54 E-value=1.5e-14 Score=127.17 Aligned_cols=122 Identities=8% Similarity=0.153 Sum_probs=97.0
Q ss_pred CCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccc
Q 013832 270 FPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 347 (435)
Q Consensus 270 ~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l 347 (435)
|.+ +++++.+++++.+|++.|.+++++++||+++ +| +++|++|.+||++++...... ........++.++
T Consensus 20 m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~--~~~~~~~~~v~~~ 91 (159)
T 1yav_A 20 MIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP---SY---RLHGLIGTNMIMNSIFGLERI--EFEKLDQITVEEV 91 (159)
T ss_dssp SEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT---TC---BEEEEEEHHHHHHHHBCSSSB--CGGGTTTSBHHHH
T ss_pred hCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---CEEEEeEHHHHHHHhhhhccc--chhhhccCCHHHh
Confidence 555 7889999999999999999999999999963 45 799999999999876532100 0000112334433
Q ss_pred cCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 348 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 348 ~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
|.++++++.+++++.+|+++|.++++ +||||++|+++|+||++||+..+...
T Consensus 92 ------------m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~ 143 (159)
T 1yav_A 92 ------------MLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKH 143 (159)
T ss_dssp ------------SBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred ------------cCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 33578899999999999999999887 99999999999999999999987654
No 75
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.54 E-value=7.9e-14 Score=116.92 Aligned_cols=121 Identities=18% Similarity=0.277 Sum_probs=97.5
Q ss_pred ceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHH
Q 013832 171 TAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTIS 250 (435)
Q Consensus 171 ~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~ 250 (435)
++.|+|. .++++++++.|+.+|++.|.++++..+||+| +++++|++|..|++..+..... ....++
T Consensus 2 ~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~G~it~~dl~~~~~~~~~---------~~~~~v- 67 (125)
T 1pbj_A 2 RVEDVMV--TDVDTIDITASLEDVLRNYVENAKGSSVVVK--EGVRVGIVTTWDVLEAIAEGDD---------LAEVKV- 67 (125)
T ss_dssp CHHHHCB--CSCCEEETTCBHHHHHHHHHHHCCCEEEEEE--TTEEEEEEEHHHHHHHHHHTCC---------TTTSBH-
T ss_pred CHHHhcC--CCceEECCCCcHHHHHHHHHHcCCCEEEEEe--CCeeEEEEeHHHHHHHHhcCCc---------ccccCH-
Confidence 3456663 3788999999999999999999999999999 4899999999999876653211 011122
Q ss_pred HHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 251 AWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 251 ~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
.+ +|.++++++.+++++.+|++.|.+++++++||++ + | +++|++|.+||++++..
T Consensus 68 --~~--------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd---~-~---~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 68 --WE--------------VMERDLVTISPRATIKEAAEKMVKNVVWRLLVEE---D-D---EIIGVISATDILRAKMA 122 (125)
T ss_dssp --HH--------------HCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHHHHC-
T ss_pred --HH--------------HcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEE---C-C---EEEEEEEHHHHHHHHHh
Confidence 11 2667889999999999999999999999999996 2 5 89999999999988754
No 76
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.54 E-value=2.4e-14 Score=132.72 Aligned_cols=113 Identities=11% Similarity=0.168 Sum_probs=96.8
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
.|.++++++.+++++.+|+++|.+++++++||++. ++ +++|++|.+|+++.+. ..++.++
T Consensus 18 ~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~l~Givt~~dl~~~~~-------------~~~v~~i- 77 (213)
T 1vr9_A 18 WVTQDFPMVEESATVRECLHRMRQYQTNECIVKDR---EG---HFRGVVNKEDLLDLDL-------------DSSVFNK- 77 (213)
T ss_dssp GCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECT---TS---BEEEEEEGGGGTTSCT-------------TSBSGGG-
T ss_pred hhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---EEEEEEEHHHHHhhcC-------------CCcHHHH-
Confidence 47889999999999999999999999999999962 35 7999999999864321 2344444
Q ss_pred CcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 349 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 349 igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
|.++++++.+++++.+|+++|.+++++++||||++|+++|+||++||+..+..
T Consensus 78 -----------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 78 -----------VSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp -----------CBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred -----------ccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 33578899999999999999999999999999988999999999999987654
No 77
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.54 E-value=1.7e-14 Score=122.13 Aligned_cols=123 Identities=18% Similarity=0.228 Sum_probs=99.7
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhcc
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHT 248 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~ 248 (435)
+.++.++|.. ++.+++++.++.+|++.|.++++..+||+|. ++++|++|..|+...+.. .. . ...+
T Consensus 4 s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~---~~-~------~~~~ 69 (128)
T 3gby_A 4 SVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKG---WP-T------VKEK 69 (128)
T ss_dssp TCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSS---SC-C------TTCB
T ss_pred ceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhh---CC-c------ccCc
Confidence 4678888855 5778999999999999999999999999996 899999999998753321 00 0 0001
Q ss_pred HHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 249 ISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 249 i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
+ +.+|.++++++.+++++.+|++.|.+++++++||+| ++| +++|++|..||++++.+
T Consensus 70 v-----------------~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd---~~g---~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 70 L-----------------GEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLAD---EDG---RYEGVVSRKRILGFLAE 126 (128)
T ss_dssp C-----------------CGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEEC---TTC---BEEEEEEHHHHHHHHHT
T ss_pred H-----------------HHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEEC---CCC---CEEEEEEHHHHHHHHHh
Confidence 1 113667889999999999999999999999999996 346 89999999999998864
No 78
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.54 E-value=1.2e-14 Score=125.91 Aligned_cols=142 Identities=18% Similarity=0.278 Sum_probs=102.7
Q ss_pred ccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhc
Q 013832 168 STHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETH 247 (435)
Q Consensus 168 ~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~ 247 (435)
+..++.|+|....++++++++.|+.+|++.|.++++..+||+|.+ ++++|+||..|++..+...... .....+...
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~---~~~~~~~~~ 78 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTW---KTFNAVQKL 78 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CC---HHHHHHHTC
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcc---cchHHHHHH
Confidence 356888999776678999999999999999999999999999964 7999999999987532211000 000000000
Q ss_pred cHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHH
Q 013832 248 TISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVC 327 (435)
Q Consensus 248 ~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~ 327 (435)
....... ..+.+|.++++++.+++++.+|+++|.+++++++||++ ++| +++|+||.+||++++.
T Consensus 79 -~~~~~~~---------~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd---~~g---~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 79 -LSKTNGK---------LVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD---SDG---KLVGIITRGNVVRAAL 142 (152)
T ss_dssp ------CC---------BHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC---TTS---BEEEEEEHHHHHHHHH
T ss_pred -HHHhccc---------cHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC---CCC---cEEEEEEHHHHHHHHH
Confidence 0000000 00113667788999999999999999999999999996 345 8999999999999987
Q ss_pred hh
Q 013832 328 RY 329 (435)
Q Consensus 328 ~~ 329 (435)
..
T Consensus 143 ~~ 144 (152)
T 4gqw_A 143 QI 144 (152)
T ss_dssp C-
T ss_pred hc
Confidence 64
No 79
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.53 E-value=5.4e-14 Score=126.32 Aligned_cols=135 Identities=11% Similarity=0.113 Sum_probs=97.2
Q ss_pred ceEe--CCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCC----Cccccccccccc
Q 013832 274 LVYA--GPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS----SLPILKLPICAI 347 (435)
Q Consensus 274 ~v~v--~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~----~~~~~~~~v~~l 347 (435)
++++ .+++++.+|++.|.+++++++||+++ +++| +++|+||.+|+++.+......... ....+.....+.
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~-d~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVS-RESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEE-CCCC---eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 7788 99999999999999999999999931 1345 899999999999987754211000 000000000000
Q ss_pred cCc-ccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 348 PVG-TWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 348 ~ig-t~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
... .....+++.|.++++++.+++++.+|+++|.+++++++||+| +|+++|+||++||++.+...
T Consensus 101 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 101 PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHh
Confidence 000 000113344556889999999999999999999999999999 89999999999999987654
No 80
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.53 E-value=4.2e-14 Score=120.87 Aligned_cols=129 Identities=16% Similarity=0.314 Sum_probs=101.8
Q ss_pred HHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHH-HHHHHHhccCCCCCChh
Q 013832 164 SVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDF-ILILRELGNHGSNLTEE 242 (435)
Q Consensus 164 ~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~-i~il~~~~~~~~~l~~e 242 (435)
.++|...++.++|.. ++++++++.|+.+|++.|.++++..+||+|++ ++++|++|..|+ ...+.. . .
T Consensus 2 ~~~l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~---~-~----- 69 (138)
T 2p9m_A 2 IDTLKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRD---K-Y----- 69 (138)
T ss_dssp ---CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTT---C-C-----
T ss_pred ccccccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhh---c-c-----
Confidence 356788899999943 67899999999999999999999999999964 899999999998 654421 0 0
Q ss_pred hhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcC-----CcEEEEEecCCCCCCCCeEEEee
Q 013832 243 ELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNE-----VATVPIIHSSSQDGSFPQLLHIA 317 (435)
Q Consensus 243 ~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~-----v~~lpVvd~~~~~g~~~~lvGii 317 (435)
....++ .+ +|.++++++.+++++.+|++.|.+++ ++++||++. +| +++|++
T Consensus 70 -~~~~~v---~~--------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~---~g---~~~Gii 125 (138)
T 2p9m_A 70 -TLETTI---GD--------------VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK---NN---KLVGII 125 (138)
T ss_dssp -CSSCBH---HH--------------HSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT---TS---BEEEEE
T ss_pred -cCCcCH---HH--------------HhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC---CC---eEEEEE
Confidence 011112 11 26678889999999999999999999 999999962 45 899999
Q ss_pred eHHhHHHHHHh
Q 013832 318 SLSGILKCVCR 328 (435)
Q Consensus 318 T~~dIl~~l~~ 328 (435)
|.+||++++..
T Consensus 126 t~~dll~~~~~ 136 (138)
T 2p9m_A 126 SDGDIIRTISK 136 (138)
T ss_dssp EHHHHHHHHHH
T ss_pred EHHHHHHHHHh
Confidence 99999998764
No 81
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.53 E-value=1.5e-13 Score=121.16 Aligned_cols=134 Identities=13% Similarity=0.220 Sum_probs=103.2
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhcc
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHT 248 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~ 248 (435)
..++.|+|.. ++++++++.|+.+|+++|.++++..+||+|+ .++++|+||..|++..+......... ........+
T Consensus 4 ~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~-~~~~~~~~~ 79 (160)
T 2o16_A 4 MIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-NKKLLGIVSQRDLLAAQESSLQRSAQ-GDSLAFETP 79 (160)
T ss_dssp CCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHHHCC----------CCCB
T ss_pred cCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHHhhccccc-ccchhcccC
Confidence 4577888843 6789999999999999999999999999996 48999999999998876542210000 000000111
Q ss_pred HHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 249 ISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 249 i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
+ .+ +|.++++++.+++++.+|+..|.+++++.+||++ + | +++|+||.+||++++..
T Consensus 80 v---~~--------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~-g---~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 80 L---FE--------------VMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA---K-D---VLVGIITDSDFVTIAIN 135 (160)
T ss_dssp H---HH--------------HSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE---T-T---EEEEEECHHHHHHHHHH
T ss_pred H---HH--------------HhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE---C-C---EEEEEEEHHHHHHHHHH
Confidence 1 11 2678899999999999999999999999999996 2 5 89999999999999876
Q ss_pred hh
Q 013832 329 YF 330 (435)
Q Consensus 329 ~~ 330 (435)
..
T Consensus 136 ~~ 137 (160)
T 2o16_A 136 LL 137 (160)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 82
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.52 E-value=1.7e-13 Score=130.30 Aligned_cols=150 Identities=12% Similarity=0.153 Sum_probs=108.0
Q ss_pred ccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCC-CCeEEEeeehHHHHHHHHHhcc-CCC---C----
Q 013832 168 STHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFS-KARFVGVLSASDFILILRELGN-HGS---N---- 238 (435)
Q Consensus 168 ~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~-~~~~vGilT~~D~i~il~~~~~-~~~---~---- 238 (435)
...+|.|+|. .+++++.++.++.+|.++|.+++++++||+|+. .++++|+||..||+.++..... ... .
T Consensus 11 ~~~~v~diMt--~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 11 YNIQVGDIMV--RDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp SSCBTTSSSB--SSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred CCCChHHhcC--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 4567889994 589999999999999999999999999999964 3689999999999987764311 000 0
Q ss_pred ----------------------CChhh----------------------------------------------------h
Q 013832 239 ----------------------LTEEE----------------------------------------------------L 244 (435)
Q Consensus 239 ----------------------l~~e~----------------------------------------------------l 244 (435)
+.... .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 00000 0
Q ss_pred hhcc---HHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHh
Q 013832 245 ETHT---ISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSG 321 (435)
Q Consensus 245 ~~~~---i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~d 321 (435)
...+ +..|.+.. .....+.....|...++++.++++|.+|+.+|.+.|++++||++ .| +|+||||..|
T Consensus 169 ~~i~~~~~~~~~~~~--l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~----~G---rLVGIVTrkD 239 (250)
T 2d4z_A 169 EMLTLEEIYRWEQRE--KNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS----MG---KLVGVVALAE 239 (250)
T ss_dssp SCCBHHHHHHHHHHH--TTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHH
T ss_pred cccChhhhhhHHHHh--cCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE----CC---EEEEEEEHHH
Confidence 0001 11222211 11111212224778889999999999999999999999999995 36 8999999999
Q ss_pred HHHHHHh
Q 013832 322 ILKCVCR 328 (435)
Q Consensus 322 Il~~l~~ 328 (435)
|++++..
T Consensus 240 l~kai~~ 246 (250)
T 2d4z_A 240 IQAAIEG 246 (250)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9998864
No 83
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.51 E-value=8.3e-14 Score=121.58 Aligned_cols=136 Identities=19% Similarity=0.245 Sum_probs=102.0
Q ss_pred HHHHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCCh
Q 013832 162 RVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE 241 (435)
Q Consensus 162 ~i~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~ 241 (435)
...+.|+..++.++ .++++++++.|+.+|++.|.++++..+||+|++ |+++|+||..|++..+..... ...
T Consensus 15 ~~~~~l~~~~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~--~~~-- 85 (152)
T 2uv4_A 15 FMSKSLEELQIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTY--NNL-- 85 (152)
T ss_dssp HHTSBHHHHTCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSC--CCT--
T ss_pred HHHhhHHHccCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhh--hhh--
Confidence 34455566777776 478899999999999999999999999999964 899999999999876542110 000
Q ss_pred hhhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHh
Q 013832 242 EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSG 321 (435)
Q Consensus 242 e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~d 321 (435)
..++ .+.+... ..|.++++++.+++++.+|++.|.+++++++||++. +| +++|+||.+|
T Consensus 86 ----~~~v---~~~m~~~--------~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~~vGiit~~d 144 (152)
T 2uv4_A 86 ----DVSV---TKALQHR--------SHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE---ND---VVKGIVSLSD 144 (152)
T ss_dssp ----TSBG---GGGGGTC--------CHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---BEEEEEEHHH
T ss_pred ----cchH---HHHHhhh--------hcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC---CC---eEEEEEEHHH
Confidence 0011 1111000 002267889999999999999999999999999962 45 8999999999
Q ss_pred HHHHHH
Q 013832 322 ILKCVC 327 (435)
Q Consensus 322 Il~~l~ 327 (435)
|++.+.
T Consensus 145 il~~l~ 150 (152)
T 2uv4_A 145 ILQALV 150 (152)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 998874
No 84
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.51 E-value=2.8e-14 Score=127.44 Aligned_cols=152 Identities=19% Similarity=0.291 Sum_probs=103.5
Q ss_pred CceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCC--CCC-Ch--hhh
Q 013832 170 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHG--SNL-TE--EEL 244 (435)
Q Consensus 170 ~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~--~~l-~~--e~l 244 (435)
.++.|+|....++++++++.|+.+|+++|.++++..+||+|++ ++++|+||..|++..+....... ..+ .. ..+
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------CC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4677788665578899999999999999999999999999964 79999999999975322111000 000 00 000
Q ss_pred hhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHH
Q 013832 245 ETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK 324 (435)
Q Consensus 245 ~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~ 324 (435)
. ............. ....+.+|.++++++.+++++.+|+++|.+++++++||++ ++| +++|+||.+||++
T Consensus 83 ~--~~~~~~~~~~~~~--~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~~vGiit~~dil~ 152 (180)
T 3sl7_A 83 K--TFNELQKLISKTY--GKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD---ADG---KLIGILTRGNVVR 152 (180)
T ss_dssp C--SHHHHHHHHHTTT--TCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC---TTC---BEEEEEEHHHHHH
T ss_pred h--hhHHHHHHHhccc--cccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC---CCC---eEEEEEEHHHHHH
Confidence 0 0000000000000 0000123677788999999999999999999999999996 346 8999999999999
Q ss_pred HHHhhhcc
Q 013832 325 CVCRYFRH 332 (435)
Q Consensus 325 ~l~~~~~~ 332 (435)
++......
T Consensus 153 ~~~~~~~~ 160 (180)
T 3sl7_A 153 AALQIKRN 160 (180)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhhh
Confidence 99876543
No 85
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.51 E-value=1.5e-13 Score=118.12 Aligned_cols=122 Identities=17% Similarity=0.194 Sum_probs=99.0
Q ss_pred CceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCC--eEEEeeehHHHHHHHHHhccCCCCCChhhhhhc
Q 013832 170 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKA--RFVGVLSASDFILILRELGNHGSNLTEEELETH 247 (435)
Q Consensus 170 ~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~--~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~ 247 (435)
.++.|+|. .++++++++.|+.+|++.|.++++..+||+|+ ++ +++|+||..|++..+..... . ..
T Consensus 5 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~~~Givt~~dl~~~~~~~~~----~------~~ 71 (141)
T 2rih_A 5 IRTSELLK--RPPVSLPETATIREVATELAKNRVGLAVLTAR-DNPKRPVAVVSERDILRAVAQRLD----L------DG 71 (141)
T ss_dssp CBGGGGCC--SCCEEEETTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEEEEHHHHHHHHHTTCC----T------TS
T ss_pred eEHHHHhc--CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-CCcceeEEEEEHHHHHHHHhcCCC----C------CC
Confidence 46778885 47889999999999999999999999999996 36 89999999999876542110 0 00
Q ss_pred cHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHH
Q 013832 248 TISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVC 327 (435)
Q Consensus 248 ~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~ 327 (435)
++ +.+|.++++++.++ ++.+|++.|.+++++++||++ ++| +++|+||.+||++.+.
T Consensus 72 ~v-----------------~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd---~~g---~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 72 PA-----------------MPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVN---KNG---ELVGVLSIRDLCFERA 127 (141)
T ss_dssp BS-----------------GGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHSCHH
T ss_pred CH-----------------HHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEc---CCC---cEEEEEEHHHHHHHHH
Confidence 11 11367889999999 999999999999999999996 245 7999999999987765
Q ss_pred h
Q 013832 328 R 328 (435)
Q Consensus 328 ~ 328 (435)
.
T Consensus 128 ~ 128 (141)
T 2rih_A 128 I 128 (141)
T ss_dssp H
T ss_pred H
Confidence 4
No 86
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.51 E-value=1.1e-13 Score=121.05 Aligned_cols=136 Identities=19% Similarity=0.228 Sum_probs=103.5
Q ss_pred hhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhh
Q 013832 166 FLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELE 245 (435)
Q Consensus 166 ~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~ 245 (435)
.|...++.++|....++++++++.|+.+|++.|.++++..+||+|+ +++++|+||..|++..+.. . .........
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~---~-~~~~~~~~~ 81 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT-SYKLHGLISMTMMMDAILG---L-ERIEFERLE 81 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT-TCCEEEEEEHHHHHHHSBC---S-SSBCGGGGG
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC-CCCEEEEeeHHHHHHHHhc---c-cccchHHhc
Confidence 3567889999865457889999999999999999999999999996 4799999999998764421 1 001000111
Q ss_pred hccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHH
Q 013832 246 THTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 325 (435)
Q Consensus 246 ~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~ 325 (435)
..++ ..+|.++++++.+++++.+|+..|.++++ +||++. +| +++|+||.+||+++
T Consensus 82 ~~~v-----------------~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~---~g---~~~Giit~~dil~~ 136 (157)
T 2emq_A 82 TMKV-----------------EEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND---DG---YFAGIFTRREVLKQ 136 (157)
T ss_dssp TCBG-----------------GGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS---SS---SEEEEEEHHHHHHH
T ss_pred CCcH-----------------HHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC---CC---eEEEEEEHHHHHHH
Confidence 1111 11377889999999999999999999988 999962 45 79999999999999
Q ss_pred HHhhhc
Q 013832 326 VCRYFR 331 (435)
Q Consensus 326 l~~~~~ 331 (435)
+.....
T Consensus 137 ~~~~~~ 142 (157)
T 2emq_A 137 LNKQLH 142 (157)
T ss_dssp HHHTTC
T ss_pred HHHHhh
Confidence 887644
No 87
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.51 E-value=1.5e-13 Score=132.59 Aligned_cols=120 Identities=15% Similarity=0.274 Sum_probs=98.6
Q ss_pred cCCCccCCCCceEeCCCCCHHHHHHHHHhc-----CCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcc
Q 013832 264 DSHGKAFPRPLVYAGPNDNLKDVARKILHN-----EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLP 338 (435)
Q Consensus 264 ~~~g~~~~~~~v~v~~~~sL~da~~~m~~~-----~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~ 338 (435)
...|.+|+++++++.+++++.+|++.|.++ +++++||++. .+ +++|+||.+|++.. .
T Consensus 135 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~------~------ 196 (278)
T 2yvy_A 135 DEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA------D------ 196 (278)
T ss_dssp TBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT---TC---BEEEEEEHHHHHHS------C------
T ss_pred chHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECC---CC---CEEEEEEHHHHhcC------C------
Confidence 344668989999999999999999999987 7999999963 35 79999999999742 0
Q ss_pred ccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcc
Q 013832 339 ILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA 414 (435)
Q Consensus 339 ~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~ 414 (435)
...++.+ .|.++++++++++++.+|+++|.+++++.+||||++|+++|+||..||+..+....
T Consensus 197 -~~~~v~~------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~ 259 (278)
T 2yvy_A 197 -PRTRVAE------------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEA 259 (278)
T ss_dssp -TTCBSTT------------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC----
T ss_pred -CCCcHHH------------HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHh
Confidence 0233333 34468889999999999999999999999999999999999999999998876544
No 88
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.50 E-value=7.9e-14 Score=121.29 Aligned_cols=121 Identities=11% Similarity=0.265 Sum_probs=98.3
Q ss_pred CceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccH
Q 013832 170 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTI 249 (435)
Q Consensus 170 ~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i 249 (435)
.++.|+|....++++++++.|+.+|++.|.++++..+||+|++ ++++|+||..|++..+..... ....++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~---------~~~~~v 97 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVD---------MRDASI 97 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSC---------CTTCBH
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCC---------cccCcH
Confidence 5888888654478899999999999999999999999999964 899999999999876642110 111122
Q ss_pred HHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHH
Q 013832 250 SAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK 324 (435)
Q Consensus 250 ~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~ 324 (435)
. + +|.++++++.+++++.+|++.|.+++++.+||+++ + +++|+||.+||++
T Consensus 98 ~---~--------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~----~---~~~Giit~~dil~ 148 (149)
T 3k2v_A 98 A---D--------------VMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG----D---HLLGVVHMHDLLR 148 (149)
T ss_dssp H---H--------------HSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHTC
T ss_pred H---H--------------HcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC----C---EEEEEEEHHHhhc
Confidence 1 1 15677889999999999999999999999999962 3 6999999999964
No 89
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.50 E-value=1e-13 Score=124.43 Aligned_cols=158 Identities=13% Similarity=0.135 Sum_probs=107.7
Q ss_pred HhhccCceecccCCCCC--eEEe--CCCccHHHHHHHHHHCCCceeeeee-CCCCeEEEeeehHHHHHHHHHhccCCCCC
Q 013832 165 VFLSTHTAYELLPESGK--VVAL--DIDLPVKQAFHILYEQGISMAPLWD-FSKARFVGVLSASDFILILRELGNHGSNL 239 (435)
Q Consensus 165 ~~l~~~~~~dl~p~s~~--vi~l--d~~~~v~eA~~~l~~~~i~s~PV~D-~~~~~~vGilT~~D~i~il~~~~~~~~~l 239 (435)
+++...++.|+|....+ ++++ +++.++.+|+++|.++++..+||+| .+.++++|+||..|++..+.........+
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~ 85 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGV 85 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCC
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCc
Confidence 67788899999976532 7788 9999999999999999999999993 23589999999999998765432111000
Q ss_pred ChhhhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeH
Q 013832 240 TEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASL 319 (435)
Q Consensus 240 ~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~ 319 (435)
....+....-.. .+. ..........+.+|.++++++.+++++.+|+.+|.+++++++||++ +| +++|+||.
T Consensus 86 ~~~~~~~~~~~~-~~~-~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd----~g---~~vGiit~ 156 (185)
T 2j9l_A 86 VSTSIIYFTEHS-PPL-PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH----NG---RLLGIITK 156 (185)
T ss_dssp CTTCEEECSSSC-CCC-CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEH
T ss_pred cccceeecccCC-ccc-ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE----CC---EEEEEEEH
Confidence 000000000000 000 0000000001224667889999999999999999999999999996 35 89999999
Q ss_pred HhHHHHHHhhhc
Q 013832 320 SGILKCVCRYFR 331 (435)
Q Consensus 320 ~dIl~~l~~~~~ 331 (435)
+||++++.....
T Consensus 157 ~dll~~l~~~~~ 168 (185)
T 2j9l_A 157 KDVLKHIAQMAN 168 (185)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHhhc
Confidence 999999887643
No 90
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.49 E-value=4.1e-14 Score=124.36 Aligned_cols=121 Identities=14% Similarity=0.224 Sum_probs=98.8
Q ss_pred hccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 167 LSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 167 l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
|...++.|+|....++++++++.|+.+|++.|.++++..+||+|.+.++++|+||..|++..+... ..
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~------------~~ 102 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP------------EQ 102 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG------------GG
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC------------Cc
Confidence 567899999976567899999999999999999999999999997545999999999987532110 11
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGIL 323 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl 323 (435)
.++ ++. |. +++++.+++++.+|++.|.+++++.+||+| +.| +++||||..||+
T Consensus 103 ~~v---~~i--------------m~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd---~~g---~~~Givt~~Dil 155 (156)
T 3oi8_A 103 FHL---KSI--------------LR-PAVFVPEGKSLTALLKEFREQRNHMAIVID---EYG---GTSGLVTFEDII 155 (156)
T ss_dssp CCH---HHH--------------CB-CCCEEETTSBHHHHHHHHHHTTCCEEEEEC---TTS---SEEEEEEHHHHC
T ss_pred ccH---HHH--------------cC-CCEEECCCCCHHHHHHHHHhcCCeEEEEEC---CCC---CEEEEEEHHHhc
Confidence 112 221 53 478999999999999999999999999996 345 799999999985
No 91
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.49 E-value=3.1e-13 Score=118.57 Aligned_cols=134 Identities=13% Similarity=0.224 Sum_probs=100.2
Q ss_pred ccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCce-eeeeeCCCCeEEEeeehHHHHHHHHHh----ccCCCCCCh-
Q 013832 168 STHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISM-APLWDFSKARFVGVLSASDFILILREL----GNHGSNLTE- 241 (435)
Q Consensus 168 ~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s-~PV~D~~~~~~vGilT~~D~i~il~~~----~~~~~~l~~- 241 (435)
...++.++|. .+++++++++|+.+|++.|.++++.. +||+|.+ +++|+||..|++..+... ......+..
T Consensus 14 ~~~~v~~im~--~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 89 (157)
T 1o50_A 14 KVKDVCKLIS--LKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSS 89 (157)
T ss_dssp BHHHHTTSSC--CCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-------C
T ss_pred ccccHhhccc--CCCceECCCCCHHHHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHH
Confidence 3445667774 47899999999999999999999999 9999963 999999999998865421 000000000
Q ss_pred -hhhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHH
Q 013832 242 -EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLS 320 (435)
Q Consensus 242 -e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~ 320 (435)
......++ ++ +|.+ ++++.+++++.+|+++|.+++++++||++. +| +++|+||.+
T Consensus 90 ~~~~~~~~v---~~--------------im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~~vGiit~~ 145 (157)
T 1o50_A 90 MKRLIAKNA---SE--------------IMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE---KG---EIVGDLNSL 145 (157)
T ss_dssp CCCCSSCBH---HH--------------HCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHH
T ss_pred HHHHcCCcH---HH--------------HcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC---CC---EEEEEEEHH
Confidence 00011111 11 2667 899999999999999999999999999962 45 799999999
Q ss_pred hHHHHHHhh
Q 013832 321 GILKCVCRY 329 (435)
Q Consensus 321 dIl~~l~~~ 329 (435)
||++.+...
T Consensus 146 dll~~l~~~ 154 (157)
T 1o50_A 146 EILLALWKG 154 (157)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 999988754
No 92
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.49 E-value=1.2e-13 Score=121.34 Aligned_cols=135 Identities=19% Similarity=0.238 Sum_probs=103.5
Q ss_pred hccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 167 LSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 167 l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
|...++.++|....++++++++.++.+|++.|.++++..+||+|++ ++++|+||..|++..+... ..+.......
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~----~~~~~~~~~~ 85 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGL----ERIEFEKLDQ 85 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCS----SSBCGGGTTT
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhh----cccchhhhcc
Confidence 4567888888653468899999999999999999999999999964 7999999999998755311 0010011111
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l 326 (435)
.++ .+ +|.++++++.+++++.+|+++|.++++ +||++. +| +++|+||.+||++++
T Consensus 86 ~~v---~~--------------~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~---~g---~~vGiit~~dil~~~ 140 (159)
T 1yav_A 86 ITV---EE--------------VMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND---EQ---VFEGIFTRRVVLKEL 140 (159)
T ss_dssp SBH---HH--------------HSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT---TC---BEEEEEEHHHHHHHH
T ss_pred CCH---HH--------------hcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC---CC---eEEEEEEHHHHHHHH
Confidence 122 11 266788999999999999999999887 999962 45 899999999999998
Q ss_pred Hhhhc
Q 013832 327 CRYFR 331 (435)
Q Consensus 327 ~~~~~ 331 (435)
.....
T Consensus 141 ~~~~~ 145 (159)
T 1yav_A 141 NKHIR 145 (159)
T ss_dssp HHHC-
T ss_pred HHHHH
Confidence 87643
No 93
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.49 E-value=1.3e-13 Score=120.74 Aligned_cols=126 Identities=15% Similarity=0.289 Sum_probs=100.5
Q ss_pred ceecccCCC----CCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 171 TAYELLPES----GKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 171 ~~~dl~p~s----~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
++.|+|... .+++++++++|+.+|++.|.++++..+||.| +++++|+||..|++..+...... ...
T Consensus 8 ~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~--------~~~ 77 (157)
T 4fry_A 8 TVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERS--------SKA 77 (157)
T ss_dssp BHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCC--------SSS
T ss_pred HHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCC--------ccc
Confidence 566666543 6788999999999999999999999999954 58999999999998765422111 011
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l 326 (435)
.++ ++ +|.++++++.+++++.+|+++|.+++++++||++ +| +++|+||.+||++++
T Consensus 78 ~~v---~~--------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd----~g---~~~Giit~~dil~~l 133 (157)
T 4fry_A 78 TRV---EE--------------IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD----GG---KLIGLISIGDLVKSV 133 (157)
T ss_dssp CBH---HH--------------HSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHH
T ss_pred cCH---HH--------------HcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE----CC---EEEEEEEHHHHHHHH
Confidence 122 22 2667889999999999999999999999999996 25 899999999999998
Q ss_pred Hhhh
Q 013832 327 CRYF 330 (435)
Q Consensus 327 ~~~~ 330 (435)
....
T Consensus 134 ~~~~ 137 (157)
T 4fry_A 134 IADQ 137 (157)
T ss_dssp HTTC
T ss_pred HHHH
Confidence 8654
No 94
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.49 E-value=1.5e-13 Score=117.54 Aligned_cols=129 Identities=19% Similarity=0.287 Sum_probs=102.3
Q ss_pred hhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhh
Q 013832 166 FLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELE 245 (435)
Q Consensus 166 ~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~ 245 (435)
.|...++.++|. .++++++++.|+.+|++.|.++++..+||+|+ +++++|+||..|++..+. ..+.. .
T Consensus 3 ~l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~---~~~~~------~ 70 (138)
T 2yzi_A 3 MDMKAPIKVYMT--KKLLGVKPSTSVQEASRLMMEFDVGSLVVIND-DGNVVGFFTKSDIIRRVI---VPGLP------Y 70 (138)
T ss_dssp CCTTSBGGGTCB--CCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTT---TTCCC------T
T ss_pred chhhhhHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHH---hcCCc------c
Confidence 356678899885 47889999999999999999999999999996 489999999999863211 11100 0
Q ss_pred hccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHH
Q 013832 246 THTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 325 (435)
Q Consensus 246 ~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~ 325 (435)
..++ ..+|.++++++.+++++.+|++.|.+++++++ |++. +| +++|++|..||+++
T Consensus 71 ~~~v-----------------~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~---~g---~~~Giit~~dil~~ 126 (138)
T 2yzi_A 71 DIPV-----------------ERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE---EG---KIVGIFTLSDLLEA 126 (138)
T ss_dssp TSBG-----------------GGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE---TT---EEEEEEEHHHHHHH
T ss_pred cCCH-----------------HHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC---CC---CEEEEEEHHHHHHH
Confidence 0111 11367888999999999999999999999999 9973 45 89999999999998
Q ss_pred HHhhh
Q 013832 326 VCRYF 330 (435)
Q Consensus 326 l~~~~ 330 (435)
+....
T Consensus 127 ~~~~~ 131 (138)
T 2yzi_A 127 SRRRL 131 (138)
T ss_dssp HHCCS
T ss_pred HHHHH
Confidence 87543
No 95
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.49 E-value=1.2e-13 Score=117.71 Aligned_cols=125 Identities=21% Similarity=0.310 Sum_probs=97.9
Q ss_pred ceecccC-CCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccH
Q 013832 171 TAYELLP-ESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTI 249 (435)
Q Consensus 171 ~~~dl~p-~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i 249 (435)
++.|+|. ...++++++++.|+.+|++.|.++++..+||+| +++++|++|..|++..+. ..+.. ....++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~---~~~~~-----~~~~~v 76 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK--DEKLVGILTERDFSRKSY---LLDKP-----VKDTQV 76 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHGG---GSSSC-----GGGSBG
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEehHHHHHHHH---HcCCC-----cccCCH
Confidence 6677774 125788999999999999999999999999998 489999999999875321 11100 001111
Q ss_pred HHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhh
Q 013832 250 SAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRY 329 (435)
Q Consensus 250 ~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~ 329 (435)
+.+|.++++++.+++++.+|++.|.+++++.+||++ +| +++|+||.+||++++...
T Consensus 77 -----------------~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd----~g---~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 77 -----------------KEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD----DG---KVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp -----------------GGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHC-
T ss_pred -----------------HHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe----CC---EEEEEEEHHHHHHHHHhc
Confidence 113778899999999999999999999999999996 25 799999999999987643
No 96
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.48 E-value=4e-14 Score=120.34 Aligned_cols=125 Identities=19% Similarity=0.282 Sum_probs=96.7
Q ss_pred hccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHH-HHHHhccCCCCCChhhhh
Q 013832 167 LSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFIL-ILRELGNHGSNLTEEELE 245 (435)
Q Consensus 167 l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~-il~~~~~~~~~l~~e~l~ 245 (435)
++..++.++|. .++++++++.|+.+|++.|.++++..+||+|++ ++++|++|..|++. .+.... . ..
T Consensus 5 ~~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~----~-----~~ 72 (133)
T 1y5h_A 5 FTMTTARDIMN--AGVTCVGEHETLTAAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGL----D-----PN 72 (133)
T ss_dssp ---CCHHHHSE--ETCCCEETTSBHHHHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTC----C-----TT
T ss_pred hhhcCHHHHhc--CCceEeCCCCCHHHHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCC----C-----cc
Confidence 34456777774 367889999999999999999999999999864 89999999999873 332110 0 01
Q ss_pred hccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHH
Q 013832 246 THTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 325 (435)
Q Consensus 246 ~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~ 325 (435)
..++ .+. |.++++++.+++++.+|++.|.+++++++||++ + | +++|++|.+||+++
T Consensus 73 ~~~v---~~~--------------m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---~-g---~~~Giit~~dil~~ 128 (133)
T 1y5h_A 73 TATA---GEL--------------ARDSIYYVDANASIQEMLNVMEEHQVRRVPVIS---E-H---RLVGIVTEADIARH 128 (133)
T ss_dssp TSBH---HHH--------------HTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHHT
T ss_pred ccCH---HHH--------------hcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE---C-C---EEEEEEEHHHHHHH
Confidence 1122 222 557888999999999999999999999999996 2 5 89999999999876
Q ss_pred HH
Q 013832 326 VC 327 (435)
Q Consensus 326 l~ 327 (435)
+.
T Consensus 129 l~ 130 (133)
T 1y5h_A 129 LP 130 (133)
T ss_dssp CC
T ss_pred HH
Confidence 54
No 97
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.48 E-value=1.5e-13 Score=120.83 Aligned_cols=137 Identities=10% Similarity=0.140 Sum_probs=101.7
Q ss_pred ccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeC-CCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 168 STHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDF-SKARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 168 ~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~-~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
...++.|+|.. ++++++++.|+.+|+++|.++++..+||+|+ ++++++|+||..|++..+...... .. ....
T Consensus 11 ~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~--~~---~~~~ 83 (164)
T 2pfi_A 11 HHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPS--RA---PGHQ 83 (164)
T ss_dssp CSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC------------CCC
T ss_pred cCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccc--cC---Cccc
Confidence 45678888854 6788999999999999999999999999996 358999999999998766421110 00 0001
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCC-ceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRP-LVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 325 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~-~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~ 325 (435)
..+ .+.+... .+..+ ++++.+++++.+|+++|.+++++++||++ +| +++|+||.+||+++
T Consensus 84 ~~v---~~~m~~~---------~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd----~g---~l~Giit~~dil~~ 144 (164)
T 2pfi_A 84 QCL---QDILARG---------CPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS----RG---RAVGCVSWVEMKKA 144 (164)
T ss_dssp CBH---HHHHHTT---------CCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE----TT---EEEEEEEHHHHHHH
T ss_pred chh---hhhhccc---------ccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEHHHHHHH
Confidence 112 2222210 01112 68899999999999999999999999996 25 89999999999999
Q ss_pred HHhhh
Q 013832 326 VCRYF 330 (435)
Q Consensus 326 l~~~~ 330 (435)
+....
T Consensus 145 ~~~~~ 149 (164)
T 2pfi_A 145 ISNLT 149 (164)
T ss_dssp HHHHH
T ss_pred HHhhh
Confidence 88754
No 98
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.48 E-value=3.9e-13 Score=115.38 Aligned_cols=132 Identities=17% Similarity=0.186 Sum_probs=96.3
Q ss_pred cCceec---ccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhh
Q 013832 169 THTAYE---LLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELE 245 (435)
Q Consensus 169 ~~~~~d---l~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~ 245 (435)
..++.+ +| ..++++++++.++.+|++.|.++++..+||+|++ ++++|++|..|++..+..... ...
T Consensus 7 ~~~v~~~~~~~--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~--------~~~ 75 (144)
T 2nyc_A 7 KIPIGDLNIIT--QDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIY--------NDL 75 (144)
T ss_dssp GSBGGGSSCCB--CSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC------------C
T ss_pred hcchhhcCCCC--CCCceEECCCCcHHHHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhccccc--------ccC
Confidence 345555 34 3578899999999999999999999999999964 899999999999876542100 001
Q ss_pred hccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHH
Q 013832 246 THTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 325 (435)
Q Consensus 246 ~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~ 325 (435)
..++ .+.+... .. ..++++++.+++++.+|++.|.+++++++||++ ++| +++|+||.+||++.
T Consensus 76 ~~~v---~~~m~~~--~~------~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---~~g---~~~Giit~~dil~~ 138 (144)
T 2nyc_A 76 SLSV---GEALMRR--SD------DFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD---DVG---RLVGVLTLSDILKY 138 (144)
T ss_dssp CSBH---HHHHHHC--C------------CEECTTSBHHHHHHHHHHHTCSEEEEEC---TTS---BEEEEEEHHHHHHH
T ss_pred CccH---HHHHhcC--cc------ccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC---CCC---CEEEEEEHHHHHHH
Confidence 1122 2222110 00 002678999999999999999999999999996 245 89999999999998
Q ss_pred HHh
Q 013832 326 VCR 328 (435)
Q Consensus 326 l~~ 328 (435)
+..
T Consensus 139 l~~ 141 (144)
T 2nyc_A 139 ILL 141 (144)
T ss_dssp HHH
T ss_pred HHh
Confidence 864
No 99
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.46 E-value=1.7e-13 Score=132.88 Aligned_cols=117 Identities=16% Similarity=0.233 Sum_probs=99.5
Q ss_pred CccCCCCceEeCCCCCHHHHHHHHHhc-----CCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccc
Q 013832 267 GKAFPRPLVYAGPNDNLKDVARKILHN-----EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILK 341 (435)
Q Consensus 267 g~~~~~~~v~v~~~~sL~da~~~m~~~-----~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~ 341 (435)
|.+|.++++++.+++++.+|++.|.++ +++++||++. ++ +++|+||.+|+++. . ..
T Consensus 140 ~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~---~~---~lvGivt~~dll~~-------~------~~ 200 (286)
T 2oux_A 140 GAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ---EN---HLVGVISLRDLIVN-------D------DD 200 (286)
T ss_dssp HHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT---TC---BEEEEEEHHHHTTS-------C------TT
T ss_pred HHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC---CC---eEEEEEEHHHHHcC-------C------CC
Confidence 557888999999999999999999998 8899999963 35 79999999999642 0 12
Q ss_pred cccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcc
Q 013832 342 LPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA 414 (435)
Q Consensus 342 ~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~ 414 (435)
.++.+++ .++++++++++++.+|+++|.+++++++||||++|+++|+||+.||+..+....
T Consensus 201 ~~v~~im------------~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 201 TLIADIL------------NERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp SBHHHHS------------BSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred CcHHHHc------------CCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 4444442 357889999999999999999999999999999999999999999999876543
No 100
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.43 E-value=9.8e-13 Score=136.31 Aligned_cols=122 Identities=15% Similarity=0.273 Sum_probs=101.7
Q ss_pred ccccCCCccCCCCceEeCCCCCHHHHHHHHHhc-----CCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCC
Q 013832 261 RQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN-----EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS 335 (435)
Q Consensus 261 ~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~-----~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~ 335 (435)
......|.+|+++++++.+++++.+|++.|.++ +++++||+|+ ++ +++|++|.+|++.. .
T Consensus 152 ~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~---~~---~lvGiVt~~Dll~~------~--- 216 (473)
T 2zy9_A 152 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA------D--- 216 (473)
T ss_dssp SCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT---TS---BEEEEEEHHHHHHS------C---
T ss_pred CCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC---CC---cEEEEEEHHHHhcC------C---
Confidence 334445678999999999999999999999986 5899999963 35 79999999999752 0
Q ss_pred CccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 336 SLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 336 ~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
...++.++ |.++++++++++++.+|+++|.+++++.+||||++|+++|+||..||+..+.+.
T Consensus 217 ----~~~~v~di------------m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 217 ----PRTRVAEI------------MNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp ----TTSBGGGT------------SBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred ----CCCcHHHH------------hCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHH
Confidence 12444444 335889999999999999999999999999999999999999999999876553
No 101
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.43 E-value=1.3e-12 Score=120.57 Aligned_cols=131 Identities=17% Similarity=0.202 Sum_probs=106.2
Q ss_pred HHHHHHHhh--ccCceecccCCCCCeEEeCCCccHHHHHHHHHHC---CCceeeeeeCCCCeEEEeeehHHHHHHHHHhc
Q 013832 159 SRHRVSVFL--STHTAYELLPESGKVVALDIDLPVKQAFHILYEQ---GISMAPLWDFSKARFVGVLSASDFILILRELG 233 (435)
Q Consensus 159 ~~~~i~~~l--~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~---~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~ 233 (435)
.+..+...| ...++.++|.. .+++++++.|+.+|++.|.++ ++..+||+|. .++++|+||..|++..
T Consensus 41 e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~~dll~~----- 112 (205)
T 3kxr_A 41 QRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE-ADKYLGTVRRYDIFKH----- 112 (205)
T ss_dssp HHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT-TCBEEEEEEHHHHTTS-----
T ss_pred HHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC-CCeEEEEEEHHHHHhC-----
Confidence 344455544 46789999954 788999999999999999998 8999999996 4899999999998531
Q ss_pred cCCCCCChhhhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeE
Q 013832 234 NHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQL 313 (435)
Q Consensus 234 ~~~~~l~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~l 313 (435)
. .. .++ + .+|.++++++.+++++.+|++.|.+++++.+||+| +.| ++
T Consensus 113 -~-~~--------~~v---~--------------~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD---~~g---~l 159 (205)
T 3kxr_A 113 -E-PH--------EPL---I--------------SLLSEDSRALTANTTLLDAAEAIEHSREIELPVID---DAG---EL 159 (205)
T ss_dssp -C-TT--------SBG---G--------------GGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC---TTS---BE
T ss_pred -C-Cc--------chH---H--------------HHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc---CCC---eE
Confidence 1 00 011 1 13778889999999999999999999999999996 345 79
Q ss_pred EEeeeHHhHHHHHHhhh
Q 013832 314 LHIASLSGILKCVCRYF 330 (435)
Q Consensus 314 vGiiT~~dIl~~l~~~~ 330 (435)
+|+||..||++.+....
T Consensus 160 vGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 160 IGRVTLRAATALVREHY 176 (205)
T ss_dssp EEEEEHHHHHHHHHHHH
T ss_pred EEEEEHHHHHHHHHHHH
Confidence 99999999999998654
No 102
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.41 E-value=5.4e-13 Score=120.31 Aligned_cols=125 Identities=17% Similarity=0.246 Sum_probs=99.7
Q ss_pred CceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccH
Q 013832 170 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTI 249 (435)
Q Consensus 170 ~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i 249 (435)
.++.++|. .++++++++.|+.+|+++|.++++.++||+|.+ ++++|++|..|++..+...... ....++
T Consensus 9 ~~v~~im~--~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~--------~~~~~v 77 (184)
T 1pvm_A 9 MRVEKIMN--SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKK--------PDEVPI 77 (184)
T ss_dssp CBGGGTSB--TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCC--------GGGSBG
T ss_pred cCHHHhcC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccC--------cccCCH
Confidence 57788884 478899999999999999999999999999864 7999999999987644311000 000111
Q ss_pred HHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 250 SAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 250 ~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
+.+|.++++++.+++++.+|+++|.+++++++||++. .| +++|+||..||++++..
T Consensus 78 -----------------~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 78 -----------------RLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDD---PG---RVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp -----------------GGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECT---TC---CEEEEEEHHHHTTTSCH
T ss_pred -----------------HHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcC---CC---eEEEEEEHHHHHHHHHh
Confidence 1137778899999999999999999999999999962 35 79999999999877654
No 103
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.37 E-value=1.7e-12 Score=136.41 Aligned_cols=120 Identities=13% Similarity=0.150 Sum_probs=99.9
Q ss_pred cCCCCceEeCCC-CCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccc
Q 013832 269 AFPRPLVYAGPN-DNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 347 (435)
Q Consensus 269 ~~~~~~v~v~~~-~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l 347 (435)
+|.++++++.++ +++.+|+++|.+++++++||++. +++ +++||||.+||++.+..... ....+|.++
T Consensus 389 iM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~--~~g---~lvGiVt~~Dll~~l~~~~~-------~~~~~V~~i 456 (527)
T 3pc3_A 389 LELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQ--DDG---SVLGVVGQETLITQIVSMNR-------QQSDPAIKA 456 (527)
T ss_dssp GCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECT--TTC---CEEEEEEHHHHHHHHHHHCC-------CTTSBGGGG
T ss_pred hCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEEC--CCC---EEEEEEEHHHHHHHHHhccC-------cCCCcHHHH
Confidence 588999999999 99999999999999999999962 245 79999999999998875421 123455554
Q ss_pred cCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCC----CcEEEEEeHHHHHHHHhhcc
Q 013832 348 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN----DSLLDIYCRSDITALAKDKA 414 (435)
Q Consensus 348 ~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~----g~lvGiis~~DI~~~~~~~~ 414 (435)
+ .++++++.+++++.+|+++|.++++ +||||++ |+++||||+.||++.+.+..
T Consensus 457 m------------~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 457 L------------NKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp E------------ETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred h------------cCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 3 3688999999999999999977765 7999984 89999999999999887654
No 104
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.31 E-value=7.4e-13 Score=141.97 Aligned_cols=134 Identities=14% Similarity=0.092 Sum_probs=96.6
Q ss_pred cCC--CCceEeCCCCCHHHHHHHHH-hcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCC---------
Q 013832 269 AFP--RPLVYAGPNDNLKDVARKIL-HNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSS--------- 336 (435)
Q Consensus 269 ~~~--~~~v~v~~~~sL~da~~~m~-~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~--------- 336 (435)
+|+ ++++++.+++++.|+.+.|. +++.+++||+|+ ++ +++|+||.+|+++.+..........
T Consensus 458 iM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~---~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~ 531 (632)
T 3org_A 458 IMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA---NG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVL 531 (632)
T ss_dssp HCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT---TC---BBCCEESHHHHTTTTTTC----------------
T ss_pred HhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec---CC---eEEEEEEHHHHHHHHHHHhhhcccccccccceec
Confidence 477 88999999999999999999 799999999963 45 7999999999988765432111000
Q ss_pred --ccccccccccccCc-----------------ccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcE
Q 013832 337 --LPILKLPICAIPVG-----------------TWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSL 397 (435)
Q Consensus 337 --~~~~~~~v~~l~ig-----------------t~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~l 397 (435)
...+.+.+..+.-. .....+.+.|.++++++++++++.+|+++|.+++++++||| ++|++
T Consensus 532 ~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~l 610 (632)
T 3org_A 532 LDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKL 610 (632)
T ss_dssp ---------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEE
T ss_pred cCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEE
Confidence 00000011111000 00112567888999999999999999999999999999999 68999
Q ss_pred EEEEeHHHHHHH
Q 013832 398 LDIYCRSDITAL 409 (435)
Q Consensus 398 vGiis~~DI~~~ 409 (435)
+|+||++||++.
T Consensus 611 vGIVT~~Dll~~ 622 (632)
T 3org_A 611 VGIVEREDVAYG 622 (632)
T ss_dssp EEEEEGGGTEEC
T ss_pred EEEEehhhHHHH
Confidence 999999999754
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.29 E-value=1.5e-11 Score=128.39 Aligned_cols=115 Identities=17% Similarity=0.264 Sum_probs=97.2
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|..+++++.+++++.+|+++|.+++++++||+++. .++ +++|+||.+|++. .. ....++.+++
T Consensus 119 m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~---~lvGiVt~rDl~~------~~------~~~~~V~~vM- 181 (511)
T 3usb_A 119 VISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DER---KLVGIITNRDMRF------IQ------DYSIKISDVM- 181 (511)
T ss_dssp SSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTC---BEEEEEEHHHHTT------CC------CSSSBHHHHC-
T ss_pred cccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCC---EEEEEEEehHhhh------hc------cCCCcHHHhc-
Confidence 66788999999999999999999999999999631 135 8999999999953 01 1234555553
Q ss_pred cccccccCCCCCC-CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 350 GTWVPKIGEPNRR-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 350 gt~~~~~g~~~~~-~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
.+ +++++++++++.+|+++|.+++++.+||||++|+++|+||+.||++.+..
T Consensus 182 -----------~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 182 -----------TKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp -----------CCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred -----------ccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 23 78999999999999999999999999999999999999999999988765
No 106
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.28 E-value=1.2e-11 Score=119.74 Aligned_cols=130 Identities=22% Similarity=0.322 Sum_probs=104.8
Q ss_pred HHHHHHhhc--cCceecccCCCCCeEEeCCCccHHHHHHHHHHC-----CCceeeeeeCCCCeEEEeeehHHHHHHHHHh
Q 013832 160 RHRVSVFLS--THTAYELLPESGKVVALDIDLPVKQAFHILYEQ-----GISMAPLWDFSKARFVGVLSASDFILILREL 232 (435)
Q Consensus 160 ~~~i~~~l~--~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~-----~i~s~PV~D~~~~~~vGilT~~D~i~il~~~ 232 (435)
+..+...+. ..++.++|.. .++++.++.|+.+|++.|.++ ++..+||+|.+ ++++|+||..|++..
T Consensus 125 ~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~dll~~---- 197 (286)
T 2oux_A 125 AGEIKELLHYEDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRDLIVN---- 197 (286)
T ss_dssp HHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHHHTTS----
T ss_pred HHHHHHHhcCChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHHHHcC----
Confidence 444555553 4688899954 788999999999999999998 88889999964 899999999998641
Q ss_pred ccCCCCCChhhhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCe
Q 013832 233 GNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQ 312 (435)
Q Consensus 233 ~~~~~~l~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~ 312 (435)
. . ..++ .+ +|.++++++.+++++.+|++.|.+++++++||+| +.| +
T Consensus 198 --~-~--------~~~v---~~--------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd---~~g---~ 243 (286)
T 2oux_A 198 --D-D--------DTLI---AD--------------ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD---YDD---H 243 (286)
T ss_dssp --C-T--------TSBH---HH--------------HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC---TTC---B
T ss_pred --C-C--------CCcH---HH--------------HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc---CCC---e
Confidence 0 0 1112 11 2667889999999999999999999999999996 346 8
Q ss_pred EEEeeeHHhHHHHHHhhh
Q 013832 313 LLHIASLSGILKCVCRYF 330 (435)
Q Consensus 313 lvGiiT~~dIl~~l~~~~ 330 (435)
++|+||..||++.+....
T Consensus 244 lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 244 LLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp EEEEEEHHHHHHHHHHHH
T ss_pred EEEEEEHHHHHHHHHHHh
Confidence 999999999999987654
No 107
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.26 E-value=1.6e-11 Score=128.99 Aligned_cols=129 Identities=14% Similarity=0.159 Sum_probs=101.9
Q ss_pred cCceecccCCCCCeEEeCCC-ccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhc
Q 013832 169 THTAYELLPESGKVVALDID-LPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETH 247 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~-~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~ 247 (435)
..++.|+|. .++++++++ +|+.+|+++|.++++.++||+|.+.++++|+||..|++..+....... ..
T Consensus 383 ~~~V~diM~--~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~---------~~ 451 (527)
T 3pc3_A 383 SLAIAELEL--PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQ---------SD 451 (527)
T ss_dssp TSBGGGGCC--CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCT---------TS
T ss_pred CCcHHHhCc--CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcC---------CC
Confidence 467889995 478899999 999999999999999999999933589999999999988765432110 00
Q ss_pred cHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCC-CCCCCCeEEEeeeHHhHHHHH
Q 013832 248 TISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSS-QDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 248 ~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~-~~g~~~~lvGiiT~~dIl~~l 326 (435)
++ . .+|.++++++.+++++.+|+++|.++++ +||++++. ..| +++||||..||++++
T Consensus 452 ~V---~--------------~im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g---~lvGIVT~~Dll~~l 509 (527)
T 3pc3_A 452 PA---I--------------KALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKV---ELKALATKLDVTTFI 509 (527)
T ss_dssp BG---G--------------GGEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCE---EEEEEEEHHHHHHHH
T ss_pred cH---H--------------HHhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCC---eEEEEEEHHHHHHHH
Confidence 11 1 1377899999999999999999987665 69997410 025 899999999999999
Q ss_pred Hhhh
Q 013832 327 CRYF 330 (435)
Q Consensus 327 ~~~~ 330 (435)
..+.
T Consensus 510 ~~~~ 513 (527)
T 3pc3_A 510 AAGK 513 (527)
T ss_dssp HTCC
T ss_pred Hhcc
Confidence 8653
No 108
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.25 E-value=1.2e-12 Score=134.29 Aligned_cols=163 Identities=23% Similarity=0.326 Sum_probs=21.8
Q ss_pred eeeeeeCCCCeEEEeeehHHHHHHHHHhccCC---CCCChhhhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCC
Q 013832 205 MAPLWDFSKARFVGVLSASDFILILRELGNHG---SNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPND 281 (435)
Q Consensus 205 s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~---~~l~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~ 281 (435)
.+|++.+. .--+|..++.-.+.+.+--+ .+++.++-. ...+.++... +| |..+++++.|+.
T Consensus 92 ~iPlvSA~----MDTVTe~~MAIamAr~GGiGvIH~n~sie~Qa----~~V~~VKr~e------~g--~i~dPvtl~P~~ 155 (556)
T 4af0_A 92 NTPFLSSP----MDTVTEDRMAIALALHGGLGIIHHNCSAEEQA----AMVRRVKKYE------NG--FITDPLCLGPDA 155 (556)
T ss_dssp SSCEEECC----CTTTCSHHHHHHHHHTTCEEEECCSSCHHHHH----HHHHHHHHCC------C---------------
T ss_pred CCCEEecC----cccccCHHHHHHHHHCCCeEEEcCCCCHHHHH----HHHHHHHhcc------cC--ccCCCeEcCCCC
Confidence 36887642 22366677666666554211 355444311 1223333322 23 456789999999
Q ss_pred CHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccCcccccccCCCCC
Q 013832 282 NLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR 361 (435)
Q Consensus 282 sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~ 361 (435)
++.||.++|.+++++.+||++....++ +|+||+|.+|+. +. . ...+|.++ |.
T Consensus 156 Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~r-f~-----d-------~~~~V~ev------------MT 207 (556)
T 4af0_A 156 TVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQ-FQ-----D-------AETPIKSV------------MT 207 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHhCCCccccccccCcCC---EEEEEEeccccc-cc-----c-------cceEhhhh------------cc
Confidence 999999999999999999997432345 899999999973 21 1 12445544 34
Q ss_pred CCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 362 RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 362 ~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
++++|++.+.++.+|.++|.++++..+||||++|+|+|+||+.|+.+...
T Consensus 208 ~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 208 TEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp --------------------------------------------------
T ss_pred cceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 58999999999999999999999999999999999999999999987543
No 109
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.23 E-value=3.9e-11 Score=115.58 Aligned_cols=120 Identities=21% Similarity=0.363 Sum_probs=98.1
Q ss_pred cCceecccCCCCCeEEeCCCccHHHHHHHHHHC-----CCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhh
Q 013832 169 THTAYELLPESGKVVALDIDLPVKQAFHILYEQ-----GISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEE 243 (435)
Q Consensus 169 ~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~-----~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~ 243 (435)
..++.++|.. .++++.++.|+.+|++.|.++ ++..+||+|.+ ++++|+||..|++.. .. .
T Consensus 134 ~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~~------~~-~----- 198 (278)
T 2yvy_A 134 EDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVA------DP-R----- 198 (278)
T ss_dssp TTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHHHHHS------CT-T-----
T ss_pred cchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHHHhcC------CC-C-----
Confidence 4688999954 788999999999999999997 79999999964 899999999998742 00 0
Q ss_pred hhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHH
Q 013832 244 LETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGIL 323 (435)
Q Consensus 244 l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl 323 (435)
.++ +.+|.++++++.+++++.+|++.|.+++++.+||+| +.| +++|+||..||+
T Consensus 199 ---~~v-----------------~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~lvGivT~~Dil 252 (278)
T 2yvy_A 199 ---TRV-----------------AEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD---EEG---RLVGIVTVDDVL 252 (278)
T ss_dssp ---CBS-----------------TTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---BEEEEEEHHHHH
T ss_pred ---CcH-----------------HHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe---CCC---eEEEEEEHHHHH
Confidence 011 113777889999999999999999999999999996 346 899999999999
Q ss_pred HHHHhh
Q 013832 324 KCVCRY 329 (435)
Q Consensus 324 ~~l~~~ 329 (435)
+.+...
T Consensus 253 ~~i~~e 258 (278)
T 2yvy_A 253 DVLEAE 258 (278)
T ss_dssp HHC---
T ss_pred HHHHHH
Confidence 887654
No 110
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.22 E-value=8.9e-11 Score=122.17 Aligned_cols=116 Identities=16% Similarity=0.257 Sum_probs=97.4
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCcccccccccccc
Q 013832 269 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 348 (435)
Q Consensus 269 ~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~ 348 (435)
+|..+++++.+++++.+|++.|.+++++++||++. .+++ +++|+||.+|+++. .. ...++.+
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~-----~~-------~~~~v~~-- 156 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFI-----SD-------YNAPISE-- 156 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHC-----SC-------SSSBTTT--
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhh-----cc-------CCCcHHH--
Confidence 37788999999999999999999999999999961 0234 79999999999742 00 1233333
Q ss_pred CcccccccCCCCCC-CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 349 VGTWVPKIGEPNRR-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 349 igt~~~~~g~~~~~-~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
.|.+ +++++++++++.+++++|.+++++.+||||++|+++|++|+.||++.+..
T Consensus 157 ----------im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 157 ----------HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp ----------SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ----------HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 3445 78899999999999999999999999999999999999999999998774
No 111
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.18 E-value=7.6e-12 Score=130.13 Aligned_cols=112 Identities=18% Similarity=0.215 Sum_probs=82.9
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|..+++++.+++++.+|+++|.+++++++||+++ ++ +++||||.+|++. .. ....++.+++
T Consensus 95 m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~---~~---~lvGiVt~rDL~~------~~------~~~~~v~diM- 155 (496)
T 4fxs_A 95 VVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTE---NN---ELVGIITGRDVRF------VT------DLTKSVAAVM- 155 (496)
T ss_dssp -CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS---SS---BEEEEEEHHHHTT------CC------CTTSBGGGTS-
T ss_pred cccCceEECCCCCHHHHHHHHHHcCCcEEEEEcc---CC---EEEEEEEHHHHhh------cc------cCCCcHHHHh-
Confidence 6788999999999999999999999999999963 35 8999999999851 11 1234455543
Q ss_pred cccccccCCCCC-C-CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 350 GTWVPKIGEPNR-R-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 350 gt~~~~~g~~~~-~-~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
. + +++++++++++.+|+++|.+++++.+||||++|+++|+||+.||++...
T Consensus 156 -----------~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 156 -----------TPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp -----------EEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred -----------cCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 2 1 5889999999999999999999999999999999999999999998643
No 112
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.16 E-value=2.9e-12 Score=133.74 Aligned_cols=117 Identities=18% Similarity=0.197 Sum_probs=0.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|.++++++.+++++.+|+++|.+++++++||++++...+ +++|+||.+||+.. .. ....++.++
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g---~lvGiVt~~Dl~~~--~~---------~~~~~V~di-- 166 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHG---VLLGLVTQRDYPID--LT---------QTETKVSDM-- 166 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCC---eEEEEEEHHHHHhh--hc---------cccCcHHHH--
Confidence 667899999999999999999999999999996310015 79999999999753 10 112444444
Q ss_pred cccccccCCCCCCC--ceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 350 GTWVPKIGEPNRRP--LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 350 gt~~~~~g~~~~~~--v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
|.++ ++++++++++.+|+++|.+++++.+||||++|+++|+||++||++.+..
T Consensus 167 ----------M~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 167 ----------MTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp -----------------------------------------------------------------
T ss_pred ----------hCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhc
Confidence 3344 8899999999999999999999999999999999999999999987654
No 113
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.16 E-value=5.9e-12 Score=131.37 Aligned_cols=167 Identities=13% Similarity=0.087 Sum_probs=26.0
Q ss_pred Cceecc-cCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCC--CCeEEEeeehHHHHHHHHHhccCCCCCChhhhhh
Q 013832 170 HTAYEL-LPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFS--KARFVGVLSASDFILILRELGNHGSNLTEEELET 246 (435)
Q Consensus 170 ~~~~dl-~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~--~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~ 246 (435)
.+.+++ |. .++++++++.|+.+|+++|.++++..+||+|.+ .++++|+||..|+... ... ..
T Consensus 96 V~~~e~gM~--~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~----~~~---------~~ 160 (503)
T 1me8_A 96 VKNFKAGFV--VSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID----LTQ---------TE 160 (503)
T ss_dssp HHTTTC--------------------------------------------------------------------------
T ss_pred hhhcccCcc--cCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh----hcc---------cc
Confidence 344565 53 378899999999999999999999999999963 2799999999998642 000 00
Q ss_pred ccHHHHHHHHHhhcccccCCCccCCCC--ceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHH
Q 013832 247 HTISAWKEGKAYLNRQIDSHGKAFPRP--LVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK 324 (435)
Q Consensus 247 ~~i~~~~e~~~~~~~~~~~~g~~~~~~--~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~ 324 (435)
. .+++ +|+++ ++++.+++++.+|+++|.+++++.+||+|+ +| +++||||.+||++
T Consensus 161 ~---~V~d--------------iM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe---~g---~lvGiIT~~Dil~ 217 (503)
T 1me8_A 161 T---KVSD--------------MMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD---DQ---HLRYIVFRKDYDR 217 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C---cHHH--------------HhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC---CC---eEEEEEEecHHHH
Confidence 0 1122 25555 899999999999999999999999999963 45 7999999999998
Q ss_pred HHHhhhcccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcE
Q 013832 325 CVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSL 397 (435)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~l 397 (435)
.+...... ..+...+.+ -..+.. ....+.++.|.+.+++.+.|--.+|..
T Consensus 218 ~~~~~~~~--------~d~~~~l~v--------------~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~ 267 (503)
T 1me8_A 218 SQVCHNEL--------VDSQKRYLV--------------GAGINT-RDFRERVPALVEAGADVLCIDSSDGFS 267 (503)
T ss_dssp ----CCCC--------BCTTSCBCC--------------EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCS
T ss_pred hhhcccch--------hcccccccc--------------ccccCc-hhHHHHHHHHHhhhccceEEecccCcc
Confidence 76532110 111111111 123445 667778899999999987663333433
No 114
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.16 E-value=1e-09 Score=114.47 Aligned_cols=173 Identities=16% Similarity=0.182 Sum_probs=120.7
Q ss_pred HHHHHHHhhccCceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCC-CCeEEEeeehHHHHHHHHHhccCCC
Q 013832 159 SRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFS-KARFVGVLSASDFILILRELGNHGS 237 (435)
Q Consensus 159 ~~~~i~~~l~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~-~~~~vGilT~~D~i~il~~~~~~~~ 237 (435)
....+++.++. .+.|- ..+++++++.|+.+|.++|.++++..+||+|+. +++++|+||..|+.. ...
T Consensus 105 q~~~V~~V~~~---~~~m~--~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~-----~~~-- 172 (511)
T 3usb_A 105 QAEQVDKVKRS---ESGVI--SDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF-----IQD-- 172 (511)
T ss_dssp HHHHHHHHHTS---SSCSS--SSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT-----CCC--
T ss_pred HHHHHHHhhcc---ccccc--cCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh-----hcc--
Confidence 33456666643 23442 367799999999999999999999999999961 479999999999842 110
Q ss_pred CCChhhhhhccHHHHHHHHHhhcccccCCCccCCC-CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEe
Q 013832 238 NLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPR-PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHI 316 (435)
Q Consensus 238 ~l~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~-~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGi 316 (435)
...++ ++. |++ +++++.+++++.+|+++|.+++++.+||+| ++| +++|+
T Consensus 173 -------~~~~V---~~v--------------M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVD---e~g---~l~Gi 222 (511)
T 3usb_A 173 -------YSIKI---SDV--------------MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVD---NNG---VLQGL 222 (511)
T ss_dssp -------SSSBH---HHH--------------CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEEC---TTS---BEEEE
T ss_pred -------CCCcH---HHh--------------cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEe---CCC---CEeee
Confidence 01122 222 666 899999999999999999999999999996 356 89999
Q ss_pred eeHHhHHHHHHhhhcccCCCccccccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCC
Q 013832 317 ASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDND 395 (435)
Q Consensus 317 iT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g 395 (435)
||..||++.+...... ...-..+. --..+.......+.++.|.+.++..+.|-..++
T Consensus 223 IT~~Dil~~~~~p~a~--------~D~~~rl~--------------V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 223 ITIKDIEKVIEFPNSA--------KDKQGRLL--------------VGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp EEHHHHHHHHHCTTCC--------BCTTSCBC--------------CEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred ccHHHHHHhhhcccch--------hhhcccee--------------eeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 9999999987531100 00000111 112344444456667788888998887655444
No 115
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.13 E-value=1.6e-11 Score=131.54 Aligned_cols=151 Identities=12% Similarity=0.041 Sum_probs=101.1
Q ss_pred ccCceecccCCCCCeEEeCCCccHHHHHHHHH-HCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccC-CCCCCh-h--
Q 013832 168 STHTAYELLPESGKVVALDIDLPVKQAFHILY-EQGISMAPLWDFSKARFVGVLSASDFILILRELGNH-GSNLTE-E-- 242 (435)
Q Consensus 168 ~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~-~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~-~~~l~~-e-- 242 (435)
...++.|+|....+++++++++|+.+|.+.|. +++.+.+||+|+ +++++|++|.+|+.+.+...... ...... +
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA-NGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT-TCBBCCEESHHHHTTTTTTC--------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec-CCeEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 45678889875468889999999999999999 799999999997 58999999999998754321100 000000 0
Q ss_pred -hhhhccHH-HHHHHHHh---------------hcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCC
Q 013832 243 -ELETHTIS-AWKEGKAY---------------LNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSS 305 (435)
Q Consensus 243 -~l~~~~i~-~~~e~~~~---------------~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~ 305 (435)
..+...+. ..+..... .....+....+|+++++++++++++.+|++.|.+++++++||++
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve--- 606 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE--- 606 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE---
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE---
Confidence 00000000 00000000 00000112336889999999999999999999999999999994
Q ss_pred CCCCCCeEEEeeeHHhHHHHH
Q 013832 306 QDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 306 ~~g~~~~lvGiiT~~dIl~~l 326 (435)
+| +++||||.+||++.+
T Consensus 607 -~G---~lvGIVT~~Dll~~~ 623 (632)
T 3org_A 607 -RG---KLVGIVEREDVAYGY 623 (632)
T ss_dssp -TT---EEEEEEEGGGTEECC
T ss_pred -CC---EEEEEEehhhHHHHH
Confidence 35 899999999997543
No 116
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.12 E-value=1.1e-10 Score=125.32 Aligned_cols=79 Identities=24% Similarity=0.413 Sum_probs=65.1
Q ss_pred ceeeEEEEecCCCcEEEEEeecCCCCCC-CCCccccCCCCeEEEEEEcCCceEEEEEEECCeeecCCCCCe----eeCCC
Q 013832 24 VLIPMRFVWPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPF----ISSEY 98 (435)
Q Consensus 24 ~~~~~~f~w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~~d~~~~~----~~d~~ 98 (435)
+...+.|.||.+|+.++|.|+||+|.+. .+|++ .++.|++++.||||.|+|||+|||+|..||.+|. ..+++
T Consensus 15 ~~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~---~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~~~~~~~~~~ 91 (645)
T 4aef_A 15 RVAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ---EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPERRVYTRKGY 91 (645)
T ss_dssp EEEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE---CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCCEEEEEEGGG
T ss_pred eEEEEEEecCCCCeEEEEEEcCCCCCCCcccceE---cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCCcccccccCc
Confidence 3577899999999999999999999975 46655 4689999999999999999999999999999973 34445
Q ss_pred CCeeeEE
Q 013832 99 GIVNTVL 105 (435)
Q Consensus 99 G~~nnvl 105 (435)
+..+.+.
T Consensus 92 ~~~~~~~ 98 (645)
T 4aef_A 92 KFHREVN 98 (645)
T ss_dssp TEEEEEE
T ss_pred Cccccee
Confidence 5544443
No 117
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.12 E-value=5.6e-12 Score=131.02 Aligned_cols=111 Identities=17% Similarity=0.202 Sum_probs=0.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|..+++++.+++++.+|+++|.+++++++||++ ++ +++||||.+|+... . ....++.++
T Consensus 94 m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g---~lvGIVt~rDl~~~-~-----------~~~~~V~~v-- 152 (490)
T 4avf_A 94 IVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE----QG---ELVGIVTGRDLRVK-P-----------NAGDTVAAI-- 152 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEhHHhhhc-c-----------ccCCcHHHH--
Confidence 668889999999999999999999999999996 34 79999999998421 1 112444444
Q ss_pred cccccccCCCCC-C-CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 350 GTWVPKIGEPNR-R-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 350 gt~~~~~g~~~~-~-~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
|. + +++++++++++.+|+++|.+++++.+||||++|+++|+||+.||++...
T Consensus 153 ----------Mtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 153 ----------MTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ----------------------------------------------------------------
T ss_pred ----------hccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 33 2 6899999999999999999999999999999999999999999998754
No 118
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.11 E-value=4.1e-10 Score=116.56 Aligned_cols=129 Identities=22% Similarity=0.365 Sum_probs=103.6
Q ss_pred HHHHHHhh--ccCceecccCCCCCeEEeCCCccHHHHHHHHHHC-----CCceeeeeeCCCCeEEEeeehHHHHHHHHHh
Q 013832 160 RHRVSVFL--STHTAYELLPESGKVVALDIDLPVKQAFHILYEQ-----GISMAPLWDFSKARFVGVLSASDFILILREL 232 (435)
Q Consensus 160 ~~~i~~~l--~~~~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~-----~i~s~PV~D~~~~~~vGilT~~D~i~il~~~ 232 (435)
+..+.+.+ ...++.++|.. .+++++++.|+.+|.+.|.++ ++..+||+|++ ++++|++|..|++..
T Consensus 143 ~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~---- 215 (473)
T 2zy9_A 143 RAEVEALARYEEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVA---- 215 (473)
T ss_dssp HHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHS----
T ss_pred HHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC-CcEEEEEEHHHHhcC----
Confidence 34444444 35678889854 799999999999999999986 58999999964 899999999998641
Q ss_pred ccCCCCCChhhhhhccHHHHHHHHHhhcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCe
Q 013832 233 GNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQ 312 (435)
Q Consensus 233 ~~~~~~l~~e~l~~~~i~~~~e~~~~~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~ 312 (435)
.. . .++ ++ +|.++++++.+++++.+|++.|.+++.+.+||+| +.| +
T Consensus 216 --~~-~--------~~v---~d--------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD---e~g---~ 261 (473)
T 2zy9_A 216 --DP-R--------TRV---AE--------------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD---EEG---R 261 (473)
T ss_dssp --CT-T--------SBG---GG--------------TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC---TTS---B
T ss_pred --CC-C--------CcH---HH--------------HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc---CCC---E
Confidence 10 0 011 11 3778899999999999999999999999999996 346 8
Q ss_pred EEEeeeHHhHHHHHHhh
Q 013832 313 LLHIASLSGILKCVCRY 329 (435)
Q Consensus 313 lvGiiT~~dIl~~l~~~ 329 (435)
++|+||.+||++.+...
T Consensus 262 lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 262 LVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp EEEEEEHHHHHHHHHHH
T ss_pred EEEEEehHhhHHHHHHH
Confidence 99999999999988654
No 119
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.10 E-value=8.3e-12 Score=130.08 Aligned_cols=114 Identities=17% Similarity=0.302 Sum_probs=5.9
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|.++++++.+++++.+|++.|.+++++.+||+|. ++ +++|+||.+||++. . . ...++.++
T Consensus 101 M~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~lvGivt~~Dl~~~-~----~-------~~~~v~~i-- 160 (494)
T 1vrd_A 101 IIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE---EG---RLVGLLTNRDVRFE-K----N-------LSKKIKDL-- 160 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC---CC---EEEEEEEHHHHHhh-c----C-------CCCcHHHH--
Confidence 6788999999999999999999999999999963 35 79999999999752 0 0 12344443
Q ss_pred cccccccCCCCCC--CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc
Q 013832 350 GTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 413 (435)
Q Consensus 350 gt~~~~~g~~~~~--~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~ 413 (435)
|.+ +++++.+++++.+|+++|.+++++.+||||++|+++|+||+.||++.+...
T Consensus 161 ----------m~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 161 ----------MTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ----------------------------------------------------------CHHHHTCT
T ss_pred ----------hCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 334 788999999999999999999999999999999999999999999987644
No 120
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.97 E-value=1.8e-11 Score=128.08 Aligned_cols=117 Identities=20% Similarity=0.283 Sum_probs=66.1
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|.++++++.+++++.+|+++|.+++++.+||+|.+..++ +++|+||.+|+.+... .....++.++
T Consensus 114 m~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~---~lvGiVt~~Dl~~~~~----------~~~~~~v~~v-- 178 (514)
T 1jcn_A 114 FITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGS---KLVGIVTSRDIDFLAE----------KDHTTLLSEV-- 178 (514)
T ss_dssp SCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC--------------------------
T ss_pred cccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCC---EEEEEEEHHHHHhhhh----------ccCCCCHHHH--
Confidence 667888999999999999999999999999996310035 7999999999864210 0112334333
Q ss_pred cccccccCCCCCC--CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 350 GTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 350 gt~~~~~g~~~~~--~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
|.+ +++++.+++++.+|+++|.+++++.+||||++|+++|+||++||++...
T Consensus 179 ----------m~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 179 ----------MTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp ------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred ----------hCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 344 7889999999999999999999999999999999999999999987543
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.94 E-value=5.4e-09 Score=108.66 Aligned_cols=117 Identities=19% Similarity=0.282 Sum_probs=95.2
Q ss_pred ecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeC-CCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHHH
Q 013832 173 YELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDF-SKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISA 251 (435)
Q Consensus 173 ~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~-~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~~ 251 (435)
.++|. .++++++++.|+.+|.+.|.++++..+||+|. +.++++|+||..|++.. ... . .++
T Consensus 93 ~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~-----~~~-~--------~~v-- 154 (491)
T 1zfj_A 93 ENGVI--IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI-----SDY-N--------API-- 154 (491)
T ss_dssp TTTTS--SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC-----SCS-S--------SBT--
T ss_pred HhcCc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh-----ccC-C--------CcH--
Confidence 45664 37889999999999999999999999999982 34899999999998642 100 0 011
Q ss_pred HHHHHHhhcccccCCCccCCC-CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 252 WKEGKAYLNRQIDSHGKAFPR-PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 252 ~~e~~~~~~~~~~~~g~~~~~-~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
..+|.+ +++++.+++++.++++.|.+++++.+||+| +.+ +++|++|..||++.+..
T Consensus 155 ---------------~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd---~~g---~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 155 ---------------SEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD---NSG---RLSGLITIKDIEKVIEF 211 (491)
T ss_dssp ---------------TTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC---TTS---BEEEEEEHHHHHHHHHC
T ss_pred ---------------HHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEEHHHHHHHHhc
Confidence 113666 889999999999999999999999999996 346 89999999999998874
No 122
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.90 E-value=1.4e-10 Score=120.61 Aligned_cols=109 Identities=15% Similarity=0.314 Sum_probs=0.5
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccccccccccccC
Q 013832 270 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 349 (435)
Q Consensus 270 ~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~~~~~v~~l~i 349 (435)
|..+++++.+++++.++++.|.+++++++||++. + +++|+||.+|++. . ...++.++
T Consensus 99 m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~----~---~lvGivt~~Dl~~---~-----------~~~~v~~i-- 155 (486)
T 2cu0_A 99 IVEDVITIAPDETVDFALFLMEKHGIDGLPVVED----E---KVVGIITKKDIAA---R-----------EGKLVKEL-- 155 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC----C---EEEEEEEHHHhcc---C-----------CCCCHHHH--
Confidence 6688999999999999999999999999999962 4 7999999999974 1 02334433
Q ss_pred cccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 013832 350 GTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 411 (435)
Q Consensus 350 gt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~ 411 (435)
|.++++++++++++.+|+++|.+++++.+||||++|+++|+||+.||++...
T Consensus 156 ----------m~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 156 ----------MTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -------------------------------------------------------------C
T ss_pred ----------ccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 3457889999999999999999999999999999999999999999998765
No 123
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.86 E-value=3.1e-09 Score=80.57 Aligned_cols=62 Identities=16% Similarity=0.337 Sum_probs=49.6
Q ss_pred ceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccccCCCCCccHHHHH
Q 013832 364 LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQVT 429 (435)
Q Consensus 364 v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~~~l~~~~~~v~~~l 429 (435)
++++.|++++.+|+++|.+++++++||+| +|+++||+|.+||++.+..+.. ++.+.+|++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~---~~~~~~V~~iM 63 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGK---NPKEVKVEEIM 63 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTC---CGGGCBGGGTC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCC---CcccCCHHHhc
Confidence 57899999999999999999999999998 5899999999999865433222 22346666654
No 124
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.85 E-value=2e-09 Score=112.04 Aligned_cols=118 Identities=19% Similarity=0.335 Sum_probs=6.2
Q ss_pred ceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHH
Q 013832 171 TAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTIS 250 (435)
Q Consensus 171 ~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~ 250 (435)
++.++|. .+++++.++.++.+|+++|.++++..+||+|++ ++++|+||..|+... .. ...
T Consensus 96 ~~~~iM~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~-----~~---------~~~--- 155 (494)
T 1vrd_A 96 KTENGII--YDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFE-----KN---------LSK--- 155 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCc--cCCeEECCCCCHHHHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhh-----cC---------CCC---
Confidence 3456664 378899999999999999999999999999964 799999999998641 00 000
Q ss_pred HHHHHHHhhcccccCCCccCCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHh
Q 013832 251 AWKEGKAYLNRQIDSHGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 328 (435)
Q Consensus 251 ~~~e~~~~~~~~~~~~g~~~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~ 328 (435)
.+++ +|.+ +++++.+++++.+|+++|.+++++.+||+|. ++ +++|+||..||++.+..
T Consensus 156 ~v~~--------------im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~---~g---~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 156 KIKD--------------LMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK---DN---KLVGLITIKDIMSVIEH 215 (494)
T ss_dssp -------------------------------------------------------------------------CHHHHTC
T ss_pred cHHH--------------HhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC---CC---eEEEEEEHHHHHhhhcc
Confidence 1122 2555 8899999999999999999999999999963 45 79999999999988753
No 125
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.83 E-value=2.3e-09 Score=111.36 Aligned_cols=115 Identities=16% Similarity=0.242 Sum_probs=1.6
Q ss_pred eecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHHH
Q 013832 172 AYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISA 251 (435)
Q Consensus 172 ~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~~ 251 (435)
+.++|- ..+++++++.|+.+|.++|.++++..+||+| .++++|+||..|+... .. ...+
T Consensus 90 ~~~~m~--~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd--~g~lvGIVt~rDl~~~-----~~---------~~~~--- 148 (490)
T 4avf_A 90 HETAIV--RDPVTVTPSTKIIELLQMAREYGFSGFPVVE--QGELVGIVTGRDLRVK-----PN---------AGDT--- 148 (490)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred cccCcc--cCceEeCCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEhHHhhhc-----cc---------cCCc---
Confidence 455664 3678999999999999999999999999999 4799999999997421 00 0001
Q ss_pred HHHHHHhhcccccCCCccCC-C-CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHH
Q 013832 252 WKEGKAYLNRQIDSHGKAFP-R-PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVC 327 (435)
Q Consensus 252 ~~e~~~~~~~~~~~~g~~~~-~-~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~ 327 (435)
+++ +|+ + +++++.+++++.+|+++|.+++++.+||+| ++| +++|+||..||++...
T Consensus 149 V~~--------------vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD---e~g---~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 149 VAA--------------IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVD---ENF---YLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred HHH--------------HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEehHHhhhhcc
Confidence 112 255 3 689999999999999999999999999996 346 7999999999998653
No 126
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.77 E-value=3.2e-09 Score=110.33 Aligned_cols=114 Identities=12% Similarity=0.175 Sum_probs=79.5
Q ss_pred ecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHHHH
Q 013832 173 YELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISAW 252 (435)
Q Consensus 173 ~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~~~ 252 (435)
.++|. ..+++++++.|+.+|.++|.++++..+||+|. +++++|+||..|+.. ... . ...+
T Consensus 92 ~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-~~~lvGiVt~rDL~~-----~~~-~--------~~~v--- 151 (496)
T 4fxs_A 92 EAGVV--THPVTVRPEQTIADVMELTHYHGFAGFPVVTE-NNELVGIITGRDVRF-----VTD-L--------TKSV--- 151 (496)
T ss_dssp CC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS-SSBEEEEEEHHHHTT-----CCC-T--------TSBG---
T ss_pred ccccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEcc-CCEEEEEEEHHHHhh-----ccc-C--------CCcH---
Confidence 45554 47789999999999999999999999999996 489999999999841 110 0 0111
Q ss_pred HHHHHhhcccccCCCccCC-C-CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHH
Q 013832 253 KEGKAYLNRQIDSHGKAFP-R-PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 253 ~e~~~~~~~~~~~~g~~~~-~-~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l 326 (435)
++ +|+ + +++++.+++++.+|+++|.+++++.+||+| +.| +++|+||..||++..
T Consensus 152 ~d--------------iM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD---e~G---~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 152 AA--------------VMTPKERLATVKEGATGAEVQEKMHKARVEKILVVN---DEF---QLKGMITAKDFHKAE 207 (496)
T ss_dssp GG--------------TSEEGGGCCEEECC----CGGGTCC---CCCEEEEC---TTS---BCCEEECCC-----C
T ss_pred HH--------------HhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc---CCC---CEEEeehHhHHHHhh
Confidence 11 255 3 588999999999999999999999999996 356 799999999998764
No 127
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.75 E-value=1.1e-08 Score=77.48 Aligned_cols=47 Identities=17% Similarity=0.217 Sum_probs=43.1
Q ss_pred CeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHH
Q 013832 181 KVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILIL 229 (435)
Q Consensus 181 ~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il 229 (435)
|+++++++.|+.+|+++|.++++.++||.|. ++++||+|.+|++..+
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKV 47 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHT
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 5789999999999999999999999999984 7999999999987543
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.74 E-value=5.8e-09 Score=108.30 Aligned_cols=155 Identities=17% Similarity=0.286 Sum_probs=21.8
Q ss_pred CCeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHHHHHHHHHhh
Q 013832 180 GKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAYL 259 (435)
Q Consensus 180 ~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~~~~e~~~~~ 259 (435)
.++++++++.++.+|.++|.++++..+||+|. ++++|+||..|++. .. . . .+++
T Consensus 101 ~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~--~~lvGivt~~Dl~~------~~--~--------~---~v~~----- 154 (486)
T 2cu0_A 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVED--EKVVGIITKKDIAA------RE--G--------K---LVKE----- 154 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCceEECCCCCHHHHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHhcc------CC--C--------C---CHHH-----
Confidence 57889999999999999999999999999996 79999999999863 10 0 0 1111
Q ss_pred cccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHHHhhhcccCCCccc
Q 013832 260 NRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPI 339 (435)
Q Consensus 260 ~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l~~~~~~~~~~~~~ 339 (435)
+|.++++++.+++++.++++.|.+++++.+||+| +.| +++|++|.+||++.+...
T Consensus 155 ---------im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd---e~g---~lvGiiT~~Dil~~~~~~---------- 209 (486)
T 2cu0_A 155 ---------LMTKEVITVPESIEVEEALKIMIENRIDRLPVVD---ERG---KLVGLITMSDLVARKKYK---------- 209 (486)
T ss_dssp -------------------------------------------------------------------CCT----------
T ss_pred ---------HccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEe---cCC---eEEEEEEHHHHHHhhhcc----------
Confidence 2566888999999999999999999999999996 345 799999999999874311
Q ss_pred cccccccccCcccccccCCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEE
Q 013832 340 LKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD-NDSLLDI 400 (435)
Q Consensus 340 ~~~~v~~l~igt~~~~~g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~-~g~lvGi 400 (435)
....+ ..+.+. --..+..++ .+.+..|.+.++..+ |+|. .|...++
T Consensus 210 --~~~~~-~~g~~~---------v~~~~~~~~--~~~a~~l~~~gvd~l-vvdta~G~~~~~ 256 (486)
T 2cu0_A 210 --NAVRD-ENGELL---------VAAAVSPFD--IKRAIELDKAGVDVI-VVDTAHAHNLKA 256 (486)
T ss_dssp --TCCBC-TTSCBC---------CEEEECTTC--HHHHHHHHHTTCSEE-EEECSCCCCHHH
T ss_pred --ccccc-cCCcee---------ecceechhh--HHHHHHHHHhcCCce-EEEecCCcEeeh
Confidence 00000 011111 001233333 566788899999987 5653 4544443
No 129
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.73 E-value=1.5e-08 Score=75.92 Aligned_cols=63 Identities=14% Similarity=0.312 Sum_probs=51.1
Q ss_pred CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccccCCCCCccHHHHH
Q 013832 363 PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQVT 429 (435)
Q Consensus 363 ~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~~~l~~~~~~v~~~l 429 (435)
+++++.+++++.+|+++|.+++++++||+|+ |+++|+||.+||++.+....... .+.+|.+++
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~~~---~~~~v~~im 63 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGKNP---KEVKVEEIM 63 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTCCG---GGCBGGGTC
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCCCc---ccCCHHHhc
Confidence 4678999999999999999999999999997 99999999999998765433211 135566554
No 130
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.70 E-value=1.7e-09 Score=111.00 Aligned_cols=107 Identities=19% Similarity=0.347 Sum_probs=0.0
Q ss_pred CeEEeCCCccHHHHHHHHHHCCCceeeeeeCC--CCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhccHHHHHHHHHh
Q 013832 181 KVVALDIDLPVKQAFHILYEQGISMAPLWDFS--KARFVGVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAY 258 (435)
Q Consensus 181 ~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~--~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~i~~~~e~~~~ 258 (435)
.++++.++.||.+|..+|.++++..+||+|.. .++++||+|.+|+-- . +.. ..+++
T Consensus 147 dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf------~--------d~~----~~V~e---- 204 (556)
T 4af0_A 147 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQF------Q--------DAE----TPIKS---- 204 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccc------c--------ccc----eEhhh----
Confidence 46899999999999999999999999999853 479999999999621 0 000 01122
Q ss_pred hcccccCCCccCCCCceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHH
Q 013832 259 LNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 325 (435)
Q Consensus 259 ~~~~~~~~g~~~~~~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~ 325 (435)
+|+++++++....++.+|.++|.++++..+||+|. ++ +|+|+||.+||++.
T Consensus 205 ----------vMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~---~g---~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 205 ----------VMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS---NG---HLVSLVARSDLLKN 255 (556)
T ss_dssp -------------------------------------------------------------------
T ss_pred ----------hcccceEEecCCCCHHHHHHHHHHccccceeEEcc---CC---cEEEEEEechhhhh
Confidence 37788999999999999999999999999999973 45 79999999999864
No 131
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.66 E-value=1e-08 Score=107.22 Aligned_cols=119 Identities=18% Similarity=0.236 Sum_probs=66.2
Q ss_pred ceecccCCCCCeEEeCCCccHHHHHHHHHHCCCceeeeeeCC--CCeEEEeeehHHHHHHHHHhccCCCCCChhhhhhcc
Q 013832 171 TAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFS--KARFVGVLSASDFILILRELGNHGSNLTEEELETHT 248 (435)
Q Consensus 171 ~~~dl~p~s~~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~--~~~~vGilT~~D~i~il~~~~~~~~~l~~e~l~~~~ 248 (435)
++.++|.. +++++.++.++.+|.++|.+++++.+||+|.. .++++|+||..|+..... . ....
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~----~--------~~~~- 173 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE----K--------DHTT- 173 (514)
T ss_dssp TCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC----------------------
T ss_pred hhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh----c--------cCCC-
Confidence 56677753 67799999999999999999999999999963 479999999999754210 0 0000
Q ss_pred HHHHHHHHHhhcccccCCCccCCC--CceEeCCCCCHHHHHHHHHhcCCcEEEEEecCCCCCCCCeEEEeeeHHhHHHHH
Q 013832 249 ISAWKEGKAYLNRQIDSHGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCV 326 (435)
Q Consensus 249 i~~~~e~~~~~~~~~~~~g~~~~~--~~v~v~~~~sL~da~~~m~~~~v~~lpVvd~~~~~g~~~~lvGiiT~~dIl~~l 326 (435)
.+++ +|.+ +++++.+++++.+|+++|.+++++.+||+|. +| +++|+||.+||++.+
T Consensus 174 --~v~~--------------vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~---~g---~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 174 --LLSE--------------VMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVND---CD---ELVAIIARTDLKKNR 231 (514)
T ss_dssp -----------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS---SS---CCC----CCCCSSCC
T ss_pred --CHHH--------------HhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECC---CC---eEEEEEEHHHHHHHh
Confidence 1111 2566 8899999999999999999999999999963 45 799999999997654
No 132
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.41 E-value=6.3e-07 Score=76.31 Aligned_cols=57 Identities=18% Similarity=0.358 Sum_probs=46.9
Q ss_pred eeeEEEEecC---CCcEEEEEee---cCCCCCC--CCCcccc--CCCCeEEEEEEcCCc-eEEEEEEE
Q 013832 25 LIPMRFVWPY---GGRSVFLSGS---FNRWSEL--LPMSPVE--GCPTVFQIIWSIPPG-YHQYKFCV 81 (435)
Q Consensus 25 ~~~~~f~w~~---~~~~V~l~Gs---f~~W~~~--~~m~~~~--~~~~~~~~~~~L~~g-~~~ykF~V 81 (435)
.+.++|.-.. .++.|+|+|+ +-+|++. ++|.+.+ .....|++++.||+| .++|||++
T Consensus 8 ~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 8 PSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred eEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 4777777764 4799999999 9999974 5887751 157899999999998 79999998
No 133
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.41 E-value=3.3e-07 Score=85.88 Aligned_cols=56 Identities=34% Similarity=0.483 Sum_probs=50.5
Q ss_pred CCCCCCCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 013832 357 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 412 (435)
Q Consensus 357 g~~~~~~v~tv~~d~~L~~a~~~m~~~~i~~lPVVD~~g~lvGiis~~DI~~~~~~ 412 (435)
.+.|.++++++.+++++.+|+++|.+++++++||||++|+++|++|..||++.+..
T Consensus 10 ~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~ 65 (245)
T 3l2b_A 10 EDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMD 65 (245)
T ss_dssp GGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHC
T ss_pred HHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 34455688999999999999999999999999999999999999999999987654
No 134
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.24 E-value=2.5e-06 Score=63.48 Aligned_cols=48 Identities=17% Similarity=0.199 Sum_probs=43.5
Q ss_pred CeEEeCCCccHHHHHHHHHHCCCceeeeeeCCCCeEEEeeehHHHHHHHH
Q 013832 181 KVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILR 230 (435)
Q Consensus 181 ~vi~ld~~~~v~eA~~~l~~~~i~s~PV~D~~~~~~vGilT~~D~i~il~ 230 (435)
+++++++++++.+|++.|.++++.++||+|. ++++|++|..|++..+.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3678999999999999999999999999995 79999999999987553
No 135
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=98.02 E-value=3.4e-06 Score=69.27 Aligned_cols=67 Identities=22% Similarity=0.511 Sum_probs=49.7
Q ss_pred eeeEEEEecC---CCcEEEEEeec---CCCCCC--CCCccccC--CCCeEEEEEEcCCc-eEEEEEEEC---C--eeecC
Q 013832 25 LIPMRFVWPY---GGRSVFLSGSF---NRWSEL--LPMSPVEG--CPTVFQIIWSIPPG-YHQYKFCVD---G--EWRHD 88 (435)
Q Consensus 25 ~~~~~f~w~~---~~~~V~l~Gsf---~~W~~~--~~m~~~~~--~~~~~~~~~~L~~g-~~~ykF~VD---g--~w~~d 88 (435)
.+.++|.-.+ .|++|+|+|+. -+|++. ++|++... .++.|++++.||+| .++|||++. | .|..+
T Consensus 6 ~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v~~~~g~~~WE~g 85 (108)
T 1ac0_A 6 AVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSVEWESD 85 (108)
T ss_dssp CCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEECCSSSCCCCCCS
T ss_pred eEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEEEcCCCCEEeccC
Confidence 3667777664 37999999985 589964 68877521 45899999999999 699999993 2 36555
Q ss_pred CCC
Q 013832 89 EHQ 91 (435)
Q Consensus 89 ~~~ 91 (435)
++.
T Consensus 86 ~nR 88 (108)
T 1ac0_A 86 PNR 88 (108)
T ss_dssp SCC
T ss_pred CCE
Confidence 544
No 136
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=97.87 E-value=4.7e-05 Score=76.83 Aligned_cols=86 Identities=16% Similarity=0.250 Sum_probs=65.5
Q ss_pred eeeEEEEecCC-C-------cEEEEE--eecC---CCCCCCCCccccCCCCeEEEEEEcCCceE-EEEEEEC--------
Q 013832 25 LIPMRFVWPYG-G-------RSVFLS--GSFN---RWSELLPMSPVEGCPTVFQIIWSIPPGYH-QYKFCVD-------- 82 (435)
Q Consensus 25 ~~~~~f~w~~~-~-------~~V~l~--Gsf~---~W~~~~~m~~~~~~~~~~~~~~~L~~g~~-~ykF~VD-------- 82 (435)
...|||.|..+ | ++|+|. |..+ +|.+ .+|+|. ...|+|+.+++||++-| .|.|+||
T Consensus 30 ~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~~~-~~m~r~-~~~~~W~~t~~l~~~~~~~Y~~~~~~~~~~~~~ 107 (403)
T 3c8d_A 30 MFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQP-QSMQRI-AGTDVWQWTTQLNANWRGSYCFIPTERDDIFSA 107 (403)
T ss_dssp EEEEEEEEECTTCSTTTCCCCEEEEEETTTC-------C-CBCEEC-TTSSEEEEEEEEETTCEEEEEEEEESCCSTTCC
T ss_pred cEEEEEEeeCCCcccccCccceEEEECcCCCccccccCc-cccccC-CCCCeEEEEEEECCCcEEEEEEEecCccccccc
Confidence 56899999876 5 799998 3222 2223 479885 35899999999999988 9999999
Q ss_pred ----------------CeeecCCCCCeeeCC-CCCeeeEEEecCCCC
Q 013832 83 ----------------GEWRHDEHQPFISSE-YGIVNTVLLATEPNF 112 (435)
Q Consensus 83 ----------------g~w~~d~~~~~~~d~-~G~~nnvl~v~~~~~ 112 (435)
|..+.||.||..... .|...|++.+.....
T Consensus 108 ~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~p~~~~ 154 (403)
T 3c8d_A 108 PSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEMPQAPL 154 (403)
T ss_dssp C--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEECTTCCC
T ss_pred ccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccCCCCCc
Confidence 778889999965543 488889999986533
No 137
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.30 E-value=0.00061 Score=72.52 Aligned_cols=66 Identities=26% Similarity=0.454 Sum_probs=50.1
Q ss_pred eEEE-EecCCCcEEEEEeecCCCCCC-CCCccccCCCCeEEEEEE-cCCceEEEEEEE---CCee--ecCCCCCee
Q 013832 27 PMRF-VWPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV---DGEW--RHDEHQPFI 94 (435)
Q Consensus 27 ~~~f-~w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-L~~g~~~ykF~V---Dg~w--~~d~~~~~~ 94 (435)
.++| +|...|++|.|+|+|++|... ++|.+. ...|+|++.++ +.+|.+ |+|.| ||.+ ..||-....
T Consensus 26 gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-~~~GvW~~~v~~~~~g~~-Y~f~i~~~~g~~~~~~DPya~~~ 99 (617)
T 1m7x_A 26 GTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-KESGIWELFIPGAHNGQL-YKYEMIDANGNLRLKSDPYAFEA 99 (617)
T ss_dssp EEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-TTTTEEEEEEETCCTTCE-EEEEEECTTSCEEEECCTTCSSE
T ss_pred cEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-CCCCEEEEEEcCCCCCCE-EEEEEEcCCCcEEEecCccceee
Confidence 4566 477779999999999999754 689863 35799999997 778874 88888 6764 567666544
No 138
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=96.97 E-value=0.00092 Score=72.69 Aligned_cols=62 Identities=26% Similarity=0.433 Sum_probs=47.5
Q ss_pred EEE-EecCCCcEEEEEeecCCCCCC-CCCccccCCCCeEEEEEE-------cCCceEEEEEEEC---Cee--ecCCCCC
Q 013832 28 MRF-VWPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-------IPPGYHQYKFCVD---GEW--RHDEHQP 92 (435)
Q Consensus 28 ~~f-~w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-------L~~g~~~ykF~VD---g~w--~~d~~~~ 92 (435)
++| +|...|++|+|+|+|++|... ++|.+. ..|+|++.++ +++|.+ |||.|+ |.| +.||-..
T Consensus 67 v~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~--~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~~~~~~dpya~ 142 (755)
T 3aml_A 67 TIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD--KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGAWVDRIPAWIR 142 (755)
T ss_dssp EEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC--TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCCCEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEecCCCCCceeeceeC--CCCEEEEEEcccccccCCCCCCE-EEEEEECCCCcEEecCCcchh
Confidence 555 487779999999999999864 799874 5799999998 778864 888885 455 3466443
No 139
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=96.82 E-value=0.0014 Score=70.76 Aligned_cols=65 Identities=35% Similarity=0.634 Sum_probs=48.7
Q ss_pred EEE-EecCCCcEEEEEeecCCCCCC-CCCccccCCCCeEEEEEE-cCCceEEEEEEE---CCee--ecCCCCCee
Q 013832 28 MRF-VWPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV---DGEW--RHDEHQPFI 94 (435)
Q Consensus 28 ~~f-~w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-L~~g~~~ykF~V---Dg~w--~~d~~~~~~ 94 (435)
++| +|...|++|+|+|+||+|+.. .||.+. +..|+|++.++ +.+|. .|||.| ||+| +.||-....
T Consensus 138 ~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DPya~~~ 210 (722)
T 3k1d_A 138 VSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADPFAFGT 210 (722)
T ss_dssp EEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSB
T ss_pred EEEEEECCCCCEEEEEeecCCCCCCcccCEEc-CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeecccceee
Confidence 455 477779999999999999865 699874 24699999997 78884 577777 5654 567766543
No 140
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.77 E-value=0.0037 Score=50.50 Aligned_cols=64 Identities=16% Similarity=0.308 Sum_probs=49.1
Q ss_pred eeEEEEecCCCcEEEEEeecC--CCCCC--CCCccccCCCCeE-EEEEEcCCc-eEEEEEEECCe--eecCCCCC
Q 013832 26 IPMRFVWPYGGRSVFLSGSFN--RWSEL--LPMSPVEGCPTVF-QIIWSIPPG-YHQYKFCVDGE--WRHDEHQP 92 (435)
Q Consensus 26 ~~~~f~w~~~~~~V~l~Gsf~--~W~~~--~~m~~~~~~~~~~-~~~~~L~~g-~~~ykF~VDg~--w~~d~~~~ 92 (435)
-.+++.|..++++|+|...+. +|... ++|.+. .+++ | +.+++|+.| .++|+|. ||. |-.+...-
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~-~~~g-w~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g~N 76 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA-EISG-YAKITVDIGSASQLEAAFN-DGNNNWDSNNTKN 76 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE-TTTT-EEEEEEECTTCSCEEEEEE-CSSSCEESTTTSC
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc-cCCC-eEEEEEECCCCCEEEEEEe-CCCCcCcCCCCcc
Confidence 356778877899999999986 79875 578764 2345 6 699999976 9999995 874 88766553
No 141
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=96.19 E-value=0.024 Score=59.91 Aligned_cols=58 Identities=17% Similarity=0.273 Sum_probs=45.6
Q ss_pred ceeeEEEEecC---CCcEEEEEeecC---CCCCC--CCCccccC--CCCeEEEEEEcCCc-eEEEEEEE
Q 013832 24 VLIPMRFVWPY---GGRSVFLSGSFN---RWSEL--LPMSPVEG--CPTVFQIIWSIPPG-YHQYKFCV 81 (435)
Q Consensus 24 ~~~~~~f~w~~---~~~~V~l~Gsf~---~W~~~--~~m~~~~~--~~~~~~~~~~L~~g-~~~ykF~V 81 (435)
..++++|.-.+ .|++|+|+|+-. +|++. ++|...+- ++..|++++.||+| .++|||+|
T Consensus 495 ~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv 563 (599)
T 2vn4_A 495 TSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYIN 563 (599)
T ss_dssp SEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEE
Confidence 45778888765 389999999865 89975 57876420 13799999999998 79999998
No 142
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=95.96 E-value=0.019 Score=61.75 Aligned_cols=68 Identities=24% Similarity=0.528 Sum_probs=51.7
Q ss_pred CceeeEEEEecC-----CCcEEEEEeecC---CCCC--------CC-CCccccCCCCeEEEEEEcCCc-eEEEEEEE---
Q 013832 23 TVLIPMRFVWPY-----GGRSVFLSGSFN---RWSE--------LL-PMSPVEGCPTVFQIIWSIPPG-YHQYKFCV--- 81 (435)
Q Consensus 23 ~~~~~~~f~w~~-----~~~~V~l~Gsf~---~W~~--------~~-~m~~~~~~~~~~~~~~~L~~g-~~~ykF~V--- 81 (435)
...++++|.-.+ .|++|+|+|+-. +|++ .+ +|... ....|++++.||+| .++|||++
T Consensus 579 ~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~--~~~~W~~~v~l~~~~~~eyKy~~~~~ 656 (686)
T 1qho_A 579 GTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAP--NYPDWFYVFSVPAGKTIQFKFFIKRA 656 (686)
T ss_dssp SSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCT--TTTSEEEEEEEETTCEEEEEEEEECT
T ss_pred CCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccC--CCCcEEEEEEeCCCCeEEEEEEEEcC
Confidence 356788888764 478999999865 7998 35 77763 46799999999999 79999998
Q ss_pred CC--eeecCCCCC
Q 013832 82 DG--EWRHDEHQP 92 (435)
Q Consensus 82 Dg--~w~~d~~~~ 92 (435)
+| .|...++.-
T Consensus 657 ~~~~~We~~~nr~ 669 (686)
T 1qho_A 657 DGTIQWENGSNHV 669 (686)
T ss_dssp TSCEEECCSSCEE
T ss_pred CCCEEeCCCCCee
Confidence 23 366655544
No 143
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=95.82 E-value=0.033 Score=59.82 Aligned_cols=69 Identities=23% Similarity=0.467 Sum_probs=51.7
Q ss_pred ceeeEEEEecC----CCcEEEEEeecC---CCCCC--C-CCccc-cCCCCeEEEEEEcCCc-eEEEEEEE---CC--eee
Q 013832 24 VLIPMRFVWPY----GGRSVFLSGSFN---RWSEL--L-PMSPV-EGCPTVFQIIWSIPPG-YHQYKFCV---DG--EWR 86 (435)
Q Consensus 24 ~~~~~~f~w~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~-~~~~~~~~~~~~L~~g-~~~ykF~V---Dg--~w~ 86 (435)
..++++|.-.. .|+.|+|+||-. +|++. + +|... ......|++++.||+| .++|||++ +| .|.
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~v~~~~~~~~~WE 657 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIKKDSQGNVTWE 657 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSCTTCEEEEEEEESSCEEEEEEEEECTTSCEEEC
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCcEEEEEEeCCCCcEEEEEEEEeCCCCeEeC
Confidence 57889998865 489999999866 89975 5 67651 0246899999999988 99999998 33 365
Q ss_pred cCCCCC
Q 013832 87 HDEHQP 92 (435)
Q Consensus 87 ~d~~~~ 92 (435)
..++..
T Consensus 658 ~g~Nr~ 663 (680)
T 1cyg_A 658 SGSNHV 663 (680)
T ss_dssp CSSCEE
T ss_pred CCCCee
Confidence 554443
No 144
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=95.63 E-value=0.015 Score=61.37 Aligned_cols=60 Identities=8% Similarity=-0.040 Sum_probs=46.2
Q ss_pred CceeeEEE-EecCCCcEEEE-EeecCCCCC----CCCCcccc--CCCCeEEEEEEcCCceEEEEEEEC
Q 013832 23 TVLIPMRF-VWPYGGRSVFL-SGSFNRWSE----LLPMSPVE--GCPTVFQIIWSIPPGYHQYKFCVD 82 (435)
Q Consensus 23 ~~~~~~~f-~w~~~~~~V~l-~Gsf~~W~~----~~~m~~~~--~~~~~~~~~~~L~~g~~~ykF~VD 82 (435)
...+.++| +|...+++|.| .|+|++|.. .++|.+.. +..|+|++.++.....+.|||.|.
T Consensus 20 ~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 20 ETQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp TTEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 45577777 47677999999 899999975 46998753 224579999998777789999884
No 145
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.33 E-value=0.031 Score=59.99 Aligned_cols=58 Identities=29% Similarity=0.408 Sum_probs=46.7
Q ss_pred ceeeEEEEecC----CCcEEEEEeecC---CCCCC--C-CCcccc-CCCCeEEEEEEcCCc-eEEEEEEE
Q 013832 24 VLIPMRFVWPY----GGRSVFLSGSFN---RWSEL--L-PMSPVE-GCPTVFQIIWSIPPG-YHQYKFCV 81 (435)
Q Consensus 24 ~~~~~~f~w~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~~-~~~~~~~~~~~L~~g-~~~ykF~V 81 (435)
..++++|.-.. .|+.|+|+||-. +|++. + +|.... .....|++++.||+| .++|||++
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 651 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIK 651 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 57889998865 489999999976 89964 5 676510 246899999999998 99999998
No 146
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.04 E-value=0.044 Score=58.85 Aligned_cols=59 Identities=27% Similarity=0.411 Sum_probs=46.7
Q ss_pred CceeeEEEEecC----CCcEEEEEeecC---CCCCC--C-CCccc-cCCCCeEEEEEEcCCc-eEEEEEEE
Q 013832 23 TVLIPMRFVWPY----GGRSVFLSGSFN---RWSEL--L-PMSPV-EGCPTVFQIIWSIPPG-YHQYKFCV 81 (435)
Q Consensus 23 ~~~~~~~f~w~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~-~~~~~~~~~~~~L~~g-~~~ykF~V 81 (435)
...++++|.-.. .|+.|+|+||-. +|++. + +|... ......|++++.||.| .++|||++
T Consensus 584 ~~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 654 (686)
T 1d3c_A 584 GDQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLK 654 (686)
T ss_dssp SSEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSCTTCEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 357889998865 489999999866 89975 4 66641 0246899999999998 99999998
No 147
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=94.95 E-value=0.045 Score=56.71 Aligned_cols=58 Identities=12% Similarity=0.175 Sum_probs=45.2
Q ss_pred CceeeEEEEecC----CCcEEEEEeecC---CCCCCC---CCccccCCCCeEEEEEEcCCc-eEEEEEEE
Q 013832 23 TVLIPMRFVWPY----GGRSVFLSGSFN---RWSELL---PMSPVEGCPTVFQIIWSIPPG-YHQYKFCV 81 (435)
Q Consensus 23 ~~~~~~~f~w~~----~~~~V~l~Gsf~---~W~~~~---~m~~~~~~~~~~~~~~~L~~g-~~~ykF~V 81 (435)
...++++|.-.+ .|++|+|+|+-. +|++.. +|... ..++.|+++++||.| .++|||++
T Consensus 417 ~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-~~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 417 VTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-SHSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp CCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-TTTTEEEEEEEEETTCCEEEEEEE
T ss_pred cCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-CCCCEEEEEEEECCCCcEEEEEEE
Confidence 345888888754 389999999865 799762 56542 234599999999998 79999998
No 148
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=94.89 E-value=0.014 Score=63.50 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=43.6
Q ss_pred EEE-EecCCCcEEEEEeecCCCCC-----CCCCccccCCCCeEEEEEE-cC------CceEEEEEEECCee
Q 013832 28 MRF-VWPYGGRSVFLSGSFNRWSE-----LLPMSPVEGCPTVFQIIWS-IP------PGYHQYKFCVDGEW 85 (435)
Q Consensus 28 ~~f-~w~~~~~~V~l~Gsf~~W~~-----~~~m~~~~~~~~~~~~~~~-L~------~g~~~ykF~VDg~w 85 (435)
++| +|...|++|.|++ |+.|.. .++|.+. ..|+|++.++ +. +|.|.|+|.|+|.|
T Consensus 18 ~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~~ 85 (750)
T 1bf2_A 18 ITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA--GSGVWAVTVPVSSIKAAGITGAVYYGYRAWGPN 85 (750)
T ss_dssp EEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC--STTEEEEEEEHHHHHHTTCCSCCEEEEEEEBTT
T ss_pred EEEEEECCCCCEEEEEE-EccCCCCccceEEecccC--CCCEEEEEECCcccccccCCCCEEEEEEEEeee
Confidence 455 4777799999999 887653 3688764 4699999987 66 89989999999864
No 149
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=94.83 E-value=0.022 Score=60.23 Aligned_cols=61 Identities=23% Similarity=0.408 Sum_probs=47.3
Q ss_pred eEEE-EecCCCcEEEEEeecCCCCCCCCCccccCCCCeEEEEEEcCCceEEEEEEECCeeecCCCCCee
Q 013832 27 PMRF-VWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFI 94 (435)
Q Consensus 27 ~~~f-~w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~~d~~~~~~ 94 (435)
.++| +|...|++|.|+|+ + ..++|.+. ..|+|++.+++.+|.+ |+|.|||....||-....
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~--~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~ 96 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSL--GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFL 96 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEE--ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCC
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeC--CCcEEEEEEECCCCcE-EEEEECCeEecCCCcccc
Confidence 3555 47777999999994 2 35799875 3699999999888875 999999966778766544
No 150
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=94.71 E-value=0.016 Score=60.74 Aligned_cols=60 Identities=22% Similarity=0.248 Sum_probs=47.5
Q ss_pred EEE-EecCCCcEEEEEeecCCCCCCCCCccccCCCCeEEEEEE-cCCceEEEEEEECCe-eecCCCCCe
Q 013832 28 MRF-VWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDGE-WRHDEHQPF 93 (435)
Q Consensus 28 ~~f-~w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykF~VDg~-w~~d~~~~~ 93 (435)
++| +|...|++|.|++.|+ ..++|.+. ..|+|++.++ +.+|. .|||.|||. ...||-...
T Consensus 11 ~~f~vwap~a~~v~l~~~~~---~~~~m~~~--~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 11 VIFTLWAPYQKSVKLKVLEK---GLYEMERD--EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEECTTCSCCEEEETTT---EEEECEEC--TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEecC---ceeecccC--CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 344 4777799999999997 45799885 4799999997 88885 699999996 777876643
No 151
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=94.71 E-value=0.022 Score=60.00 Aligned_cols=61 Identities=18% Similarity=0.197 Sum_probs=46.4
Q ss_pred CCceeeEEEE-ecCCCcEEEE-EeecCCCCC------CCCCcccc--CCCCeEEEEEEcCCceEEEEEEEC
Q 013832 22 DTVLIPMRFV-WPYGGRSVFL-SGSFNRWSE------LLPMSPVE--GCPTVFQIIWSIPPGYHQYKFCVD 82 (435)
Q Consensus 22 ~~~~~~~~f~-w~~~~~~V~l-~Gsf~~W~~------~~~m~~~~--~~~~~~~~~~~L~~g~~~ykF~VD 82 (435)
....+.++|. |...+++|.| .|+|++|.. .++|.+.+ +..|+|++.++.....+.|+|.|+
T Consensus 19 ~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 19 DSETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SSSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 3456778775 7677999999 799999965 47998753 124579999987777788888884
No 152
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=94.13 E-value=0.054 Score=57.92 Aligned_cols=53 Identities=17% Similarity=0.304 Sum_probs=41.6
Q ss_pred EEE-EecCCCcEEEEEeecCCCC--CCCCCccccCCCCeEEEEEE-cCCceEEEEEEECCe
Q 013832 28 MRF-VWPYGGRSVFLSGSFNRWS--ELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDGE 84 (435)
Q Consensus 28 ~~f-~w~~~~~~V~l~Gsf~~W~--~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykF~VDg~ 84 (435)
++| +|...|++|.|++ |+++. ..++|.+. ..|+|++.++ +.+|.+ |+|.|+|.
T Consensus 21 ~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~--~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 21 VNFTLFSAHAERVELCV-FDANGQEHRYDLPGH--SGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEECSSCSEEEEEE-ECTTCCEEEEECCEE--ETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred EEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCC--CCCEEEEEECCCCCCCE-EEEEEeee
Confidence 555 4777799999999 98765 34789764 4699999986 778876 99999884
No 153
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=94.10 E-value=0.04 Score=59.52 Aligned_cols=54 Identities=17% Similarity=0.376 Sum_probs=42.0
Q ss_pred EEE-EecCCCcEEEEEeecCCCC-----CCCCCccccCCCCeEEEEEE-cCCceEEEEEEECCee
Q 013832 28 MRF-VWPYGGRSVFLSGSFNRWS-----ELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDGEW 85 (435)
Q Consensus 28 ~~f-~w~~~~~~V~l~Gsf~~W~-----~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykF~VDg~w 85 (435)
++| +|...|++|.|++ |+.+. ..++|.+. ..|+|.+.++ +.+|.+ |+|.|+|.|
T Consensus 31 ~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~--~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 31 VNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNK--TGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEE--SSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred EEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccC--CCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 566 4777799999999 87644 23688764 4799999986 788987 999999864
No 154
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=92.92 E-value=0.14 Score=55.24 Aligned_cols=63 Identities=24% Similarity=0.391 Sum_probs=45.2
Q ss_pred EEE-EecCCCcEEEEEeecCCCCCC-CCCccccCCCCeEEEEEE-cCCceEEEEEEE--CCee--ecCCCCCe
Q 013832 28 MRF-VWPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV--DGEW--RHDEHQPF 93 (435)
Q Consensus 28 ~~f-~w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-L~~g~~~ykF~V--Dg~w--~~d~~~~~ 93 (435)
++| +|...|++|.|++.|++|... ++|.+. ..|+|++.++ +.+| ..|+|.| +|.| ..||-...
T Consensus 115 ~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~--~~g~w~~~v~~~~~g-~~Y~f~v~~~g~~~~~~DPya~~ 184 (718)
T 2e8y_A 115 TVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL--EKGVYAVTVTGDLHG-YEYLFCICNNSEWMETVDQYAKA 184 (718)
T ss_dssp EEEEEECTTCSEEEEEEECTTSCCEEEECEEC--GGGEEEEEEESCCTT-CEEEEEEEETTEEEEECCTTCSS
T ss_pred EEEEEECCCCCEEEEEEEcCCCcceEEeCccC--CCCEEEEEECCCCCC-CeEEEEEEeCCeEEEecCCcccc
Confidence 455 477779999999999988754 699875 3699999987 4566 3455655 5764 56776643
No 155
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=92.18 E-value=0.12 Score=58.23 Aligned_cols=65 Identities=15% Similarity=0.143 Sum_probs=46.3
Q ss_pred EEEE-ecCCCcEEEEEe-ecCCCCCC-CCCccccCCCCeEEEEEE-cCCceEEEEEEEC------Ce----eecCCCCCe
Q 013832 28 MRFV-WPYGGRSVFLSG-SFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVD------GE----WRHDEHQPF 93 (435)
Q Consensus 28 ~~f~-w~~~~~~V~l~G-sf~~W~~~-~~m~~~~~~~~~~~~~~~-L~~g~~~ykF~VD------g~----w~~d~~~~~ 93 (435)
++|. |...|++|.|++ +|++|... ++|.+. ...|+|++.++ +.+|.+ |+|.|+ |. ...||-...
T Consensus 306 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~~~~~~DPYa~~ 383 (1083)
T 2fhf_A 306 VTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVEQYEVTDPYAHS 383 (1083)
T ss_dssp EEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEcCCCCccceEECeEC-CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccccceecCCccce
Confidence 4444 777799999999 89999753 689753 34699999985 778854 777774 33 366766643
Q ss_pred e
Q 013832 94 I 94 (435)
Q Consensus 94 ~ 94 (435)
.
T Consensus 384 ~ 384 (1083)
T 2fhf_A 384 L 384 (1083)
T ss_dssp B
T ss_pred e
Confidence 3
No 156
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=91.11 E-value=0.17 Score=55.55 Aligned_cols=53 Identities=13% Similarity=0.014 Sum_probs=37.3
Q ss_pred EEEE-ecCCCcEEEEEeecCCCCCCC--CCccccCCCCeEEEEEE-cCCceEEEEEEECC
Q 013832 28 MRFV-WPYGGRSVFLSGSFNRWSELL--PMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDG 83 (435)
Q Consensus 28 ~~f~-w~~~~~~V~l~Gsf~~W~~~~--~m~~~~~~~~~~~~~~~-L~~g~~~ykF~VDg 83 (435)
++|. |...|++|.|++-+++|.... +|.+ +..|+|++.++ +.+|. .|+|.|++
T Consensus 138 ~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~--~~~g~W~~~~~~~~~g~-~Y~y~v~~ 194 (884)
T 4aio_A 138 VSLHLWAPTAQGVSVCFFDGPAGPALETVQLK--ESNGVWSVTGPREWENR-YYLYEVDV 194 (884)
T ss_dssp EEEEEECTTCSEEEEEEESTTTSCEEEEEECE--EETTEEEEEEEGGGTTC-EEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCeeeeeeec--CCCCEEEEEECCCCCCC-EEEEEEeC
Confidence 4555 777799999999666665542 2333 35799999987 56674 48888875
No 157
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=90.85 E-value=0.053 Score=57.04 Aligned_cols=59 Identities=15% Similarity=0.256 Sum_probs=43.9
Q ss_pred CceeeEEE-EecCCCcEEEE-EeecCCCCC---CCCCcccc--CCCCeEEEEEEcCCceEEEEEEE
Q 013832 23 TVLIPMRF-VWPYGGRSVFL-SGSFNRWSE---LLPMSPVE--GCPTVFQIIWSIPPGYHQYKFCV 81 (435)
Q Consensus 23 ~~~~~~~f-~w~~~~~~V~l-~Gsf~~W~~---~~~m~~~~--~~~~~~~~~~~L~~g~~~ykF~V 81 (435)
...+.++| +|...+++|.| .|+|++|.. .++|++.. +..|+|++.++.....+.|||.|
T Consensus 20 ~~~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i 85 (583)
T 1ea9_C 20 GTTVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATDELFDYWECEVTPPYRRVKYGFLL 85 (583)
T ss_dssp SSCEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEECSSCEEECCEECCTTSCEEECBCC
T ss_pred CCEEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEeccCCeEEEEEEEECCCceEEEEEEE
Confidence 34566666 47677999999 799999975 36898753 22467999998776677888877
No 158
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=90.71 E-value=0.046 Score=56.78 Aligned_cols=57 Identities=21% Similarity=0.406 Sum_probs=0.0
Q ss_pred ceeeEEEEe-cC---CCcEEEEEeecC---CCCCC--CCCccccCCCCeEEEEEEcCCc-eEEEEEEE
Q 013832 24 VLIPMRFVW-PY---GGRSVFLSGSFN---RWSEL--LPMSPVEGCPTVFQIIWSIPPG-YHQYKFCV 81 (435)
Q Consensus 24 ~~~~~~f~w-~~---~~~~V~l~Gsf~---~W~~~--~~m~~~~~~~~~~~~~~~L~~g-~~~ykF~V 81 (435)
..++++|.- .+ .|++|+|+||-. +|++. ++|... .....|++++.||+| .++|||+|
T Consensus 429 ~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-~~~~~W~~~v~lp~~~~~eyKy~~ 495 (527)
T 1gcy_A 429 ALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-SGYPTWKGSIALPAGQNEEWKCLI 495 (527)
T ss_dssp --------------------------------------------------------------------
T ss_pred CEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-CCCCeEEEEEEeCCCCcEEEEEEE
Confidence 457888886 32 489999999866 79974 678632 246789999999999 79999997
No 159
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=90.38 E-value=0.3 Score=51.88 Aligned_cols=50 Identities=12% Similarity=0.184 Sum_probs=36.7
Q ss_pred cCCCcEEEEEeecCCCCC-CCCCcc--cc--CCCCeEEEEEEcCCceEEEEEEECC
Q 013832 33 PYGGRSVFLSGSFNRWSE-LLPMSP--VE--GCPTVFQIIWSIPPGYHQYKFCVDG 83 (435)
Q Consensus 33 ~~~~~~V~l~Gsf~~W~~-~~~m~~--~~--~~~~~~~~~~~L~~g~~~ykF~VDg 83 (435)
...+++|.|++.|++ .. .++|.+ .. +..|+|++.++....-..|+|.|+|
T Consensus 42 ap~a~~V~l~~~~~~-~~~~~~m~~~~~~~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 42 DITSANIKYWDTADN-AFHWVPMVWDSNDPTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCSEEEEEEEETTTT-EEEEEECEEEEECTTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred cCCeeEEEEEEecCC-CEEEEEeEEeeccccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 345899999999874 32 378987 32 2348999999876666779999964
No 160
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=90.22 E-value=0.22 Score=45.52 Aligned_cols=51 Identities=20% Similarity=0.210 Sum_probs=41.3
Q ss_pred CcEEEEEeecCCCCCC--CCCccccCCCCeEEEEEEcCCceEEEEEEECCeeec
Q 013832 36 GRSVFLSGSFNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRH 87 (435)
Q Consensus 36 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~~ 87 (435)
.+++||+|++++|... .+|.+....+|.|...+.|+.|. +|||.-+..|-.
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~~~~g~y~~~~yl~ag~-~fKf~~~~~~~~ 64 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANS-EFKFGTKENEYI 64 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTCTTEEEEEEEECTTE-EEEEESSTTCCB
T ss_pred cceEEEEecCCCCCCCccceeeeccCCCceEEEEEEEcCCC-eEEEeeccCccc
Confidence 5789999999998743 58887766789999999998775 899998766543
No 161
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=89.93 E-value=0.52 Score=52.27 Aligned_cols=60 Identities=27% Similarity=0.512 Sum_probs=42.8
Q ss_pred eeeEEEEecCCCcEEEEEeec-------CCCCCCC---CCccccCCCCeEEEEEEcCCceEEEEEEECCeee
Q 013832 25 LIPMRFVWPYGGRSVFLSGSF-------NRWSELL---PMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWR 86 (435)
Q Consensus 25 ~~~~~f~w~~~~~~V~l~Gsf-------~~W~~~~---~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~ 86 (435)
++++..--......+.+.|+| .+|++.- -|.+. .+|.|+.+-.||+|.|+||+.++|.|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~~--~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 152 KIPVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKKI--NPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp EECEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEEE--ETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccccccccccccchhhhccccccCCCCCCcceeecc--CCcceeeeeccCCcceeEEEeecCccc
Confidence 444444433445667888866 5788763 34333 378999999999999999999998773
No 162
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=89.89 E-value=0.29 Score=54.25 Aligned_cols=58 Identities=21% Similarity=0.212 Sum_probs=41.5
Q ss_pred EecCCCcEEEEEeecCCCC----CCCCCccccCCCCeEEEEEE-cCCceEEEEEEE--CCe--eecCCCCC
Q 013832 31 VWPYGGRSVFLSGSFNRWS----ELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV--DGE--WRHDEHQP 92 (435)
Q Consensus 31 ~w~~~~~~V~l~Gsf~~W~----~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykF~V--Dg~--w~~d~~~~ 92 (435)
+|...|++|.|++ |++|. ..++|.+. ..|+|++.++ +.+|. .|+|.| +|. +..||-..
T Consensus 331 vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~g~-~Y~y~v~~~g~~~~~~DPya~ 397 (921)
T 2wan_A 331 VWAPTASNVQLLL-YNSEKGSITKQLEMQKS--DNGTWKLQVSGNLENW-YYLYQVTVNGTTQTAVDPYAR 397 (921)
T ss_dssp EECTTCSEEEEEE-ESSSSSCCSEEEECEEC--GGGEEEEEEESCCTTC-EEEEEEECSSCEEEECCTTCS
T ss_pred EECCCCCEEEEEE-EeCCCCCcCeEEeCeeC--CCCEEEEEEccCCCCC-EEEEEEEeCCeEEEecCCcce
Confidence 4666799999997 99994 34799874 3699999987 55674 366665 565 45677554
No 163
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=89.87 E-value=0.66 Score=37.03 Aligned_cols=63 Identities=16% Similarity=0.402 Sum_probs=43.9
Q ss_pred eEEEEecCCCcEEEEEeecC--CCCCC--CCCccccCCCCeEEEEEEcCCc-eEEEEEEECC--eeecCCCC
Q 013832 27 PMRFVWPYGGRSVFLSGSFN--RWSEL--LPMSPVEGCPTVFQIIWSIPPG-YHQYKFCVDG--EWRHDEHQ 91 (435)
Q Consensus 27 ~~~f~w~~~~~~V~l~Gsf~--~W~~~--~~m~~~~~~~~~~~~~~~L~~g-~~~ykF~VDg--~w~~d~~~ 91 (435)
.+++.|..++.+|+|-=.+. +|... ++|.+. .+.|.|..+|+|+.+ .++|+| -|| .|-.+...
T Consensus 11 ~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN~g~ 80 (102)
T 2c3v_A 11 DITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNNQGR 80 (102)
T ss_dssp SEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECGGGT
T ss_pred EEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-ccCCceEEEEecCCCceEEEEE-eCCCcccccCCCc
Confidence 34555557788888875565 37753 577663 368889999999975 899999 555 48764433
No 164
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=89.11 E-value=0.18 Score=55.47 Aligned_cols=64 Identities=16% Similarity=0.130 Sum_probs=46.3
Q ss_pred EEEE-ecCCCcEEEEEe-ecCCCCC---CCCCccccCCCCeEEEEEEcCCce-----EEEEEEEC--Ce--eecCCCCCe
Q 013832 28 MRFV-WPYGGRSVFLSG-SFNRWSE---LLPMSPVEGCPTVFQIIWSIPPGY-----HQYKFCVD--GE--WRHDEHQPF 93 (435)
Q Consensus 28 ~~f~-w~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~L~~g~-----~~ykF~VD--g~--w~~d~~~~~ 93 (435)
+.|. |...|++|.|++ ++++|.. .++|.+. ..|+|++.+.+.||. +.|+|.|+ |. ...||-...
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~~DPYA~~ 223 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN--NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAKS 223 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC--TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC--CCCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEecCcccee
Confidence 4554 777799999998 6888853 4799873 579999999876762 57788875 33 456776643
No 165
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=87.72 E-value=0.5 Score=50.87 Aligned_cols=64 Identities=11% Similarity=0.112 Sum_probs=45.2
Q ss_pred EEEE-ecCCCcEEEEEe-ecCCCCC---CCCCccccCCCCeEEEEEEcC--Cc-----eEEEEEEEC--Cee--ecCCCC
Q 013832 28 MRFV-WPYGGRSVFLSG-SFNRWSE---LLPMSPVEGCPTVFQIIWSIP--PG-----YHQYKFCVD--GEW--RHDEHQ 91 (435)
Q Consensus 28 ~~f~-w~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~L~--~g-----~~~ykF~VD--g~w--~~d~~~ 91 (435)
++|. |...|++|.|++ +|++|.. .++|.+. ..|+|++.++-. +| -+.|+|.|+ |.+ ..||-.
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~~~~~DPya 103 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG--ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 103 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC--GGGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC--CCCEEEEEECCccCCCccccCCcEEEEEEEeCCceEEecCCce
Confidence 5564 777799999999 8988864 4789874 469999998731 34 156778775 543 467755
Q ss_pred Ce
Q 013832 92 PF 93 (435)
Q Consensus 92 ~~ 93 (435)
..
T Consensus 104 ~~ 105 (714)
T 2ya0_A 104 KS 105 (714)
T ss_dssp SE
T ss_pred ee
Confidence 43
No 166
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=83.41 E-value=1.3 Score=46.67 Aligned_cols=61 Identities=23% Similarity=0.356 Sum_probs=44.5
Q ss_pred EEEE-ecCCCcEEEEEeecCCCCCCCCCccccCCCCeEEEEEE-cCCceEEEEEEEC-CeeecCCCCCeee
Q 013832 28 MRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVD-GEWRHDEHQPFIS 95 (435)
Q Consensus 28 ~~f~-w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykF~VD-g~w~~d~~~~~~~ 95 (435)
++|. |...|++|.|++ +|.. .||.+. .+|.|++.++ +.+|. .|||.|+ |....||-.....
T Consensus 44 ~~F~vwap~a~~v~l~~---~~~~-~~m~~~--~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~~ 107 (618)
T 3m07_A 44 VRFRLWATGQQKVMLRL---AGKD-QEMQAN--GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQK 107 (618)
T ss_dssp EEEEEECTTCSCEEEEE---TTEE-EECEEC--STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCBS
T ss_pred EEEEEECCCCCEEEEEE---CCCc-ccCeec--CCEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceeee
Confidence 4554 677799999998 3544 699885 4689999885 77785 5888995 5577888765443
No 167
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=78.82 E-value=2.6 Score=47.16 Aligned_cols=62 Identities=11% Similarity=0.158 Sum_probs=43.0
Q ss_pred EEE-EecCCCcEEEEEe-ecCCCCC---CCCCccccCCCCeEEEEEEcC--Cc-----eEEEEEEEC--Ce--eecCCCC
Q 013832 28 MRF-VWPYGGRSVFLSG-SFNRWSE---LLPMSPVEGCPTVFQIIWSIP--PG-----YHQYKFCVD--GE--WRHDEHQ 91 (435)
Q Consensus 28 ~~f-~w~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~L~--~g-----~~~ykF~VD--g~--w~~d~~~ 91 (435)
++| +|...|++|.|++ +|++|.. .++|.+. ..|+|++.++-. +| -+.|+|.|+ |. ...||-.
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~~~~DPYa 410 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG--ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 410 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC--GGGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccC--CCCEEEEEEcccccCCccccCCcEEEEEEEeCCeEEEecCccc
Confidence 455 4677799999999 8988864 4799873 569999998741 22 255777775 53 4466654
No 168
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=67.90 E-value=18 Score=28.78 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=37.1
Q ss_pred CcEEEEEee--cCCCCC-CC--CCccc----cCCCCeEEEEEEcCCc-eEEEEEEECCe--eecCC
Q 013832 36 GRSVFLSGS--FNRWSE-LL--PMSPV----EGCPTVFQIIWSIPPG-YHQYKFCVDGE--WRHDE 89 (435)
Q Consensus 36 ~~~V~l~Gs--f~~W~~-~~--~m~~~----~~~~~~~~~~~~L~~g-~~~ykF~VDg~--w~~d~ 89 (435)
.|+|.|.=+ |++|+. .. +..-. ...-..|+..++||+- ++--+|.++|+ |-.+.
T Consensus 33 eK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWDNN~ 98 (106)
T 2djm_A 33 SKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYDNNN 98 (106)
T ss_dssp CEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEEEEEEEEEESSCEEEECSS
T ss_pred CcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCeEEEEEEEECCcEEEcCCC
Confidence 478888877 999998 42 22111 1234689999999765 67778999996 65443
No 169
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=67.18 E-value=5.7 Score=40.17 Aligned_cols=47 Identities=13% Similarity=0.217 Sum_probs=36.6
Q ss_pred CcEEEEEeecCCCCCC--CCCccccCCCCeEEEEEEcCCceEEEEEEECC
Q 013832 36 GRSVFLSGSFNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDG 83 (435)
Q Consensus 36 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg 83 (435)
....||.|++++|... .+|.+....++.|+....+..+. +|||..-.
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fK~~~~~ 198 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTS-NFKIFPAS 198 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECSSCTTEEEEEEEESSCC-EEEEEEGG
T ss_pred cceeEEEcccCCCCcccCeeeeeecCCCceEEEEEEeccCc-eEEEeecc
Confidence 3568999999999854 46666656789999999987665 79999743
No 170
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=57.24 E-value=17 Score=27.30 Aligned_cols=32 Identities=16% Similarity=0.343 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCcEEEEEeHHHHHHHHhhcccc
Q 013832 385 VSSIPIVDDNDSLLDIYCRSDITALAKDKAYA 416 (435)
Q Consensus 385 i~~lPVVD~~g~lvGiis~~DI~~~~~~~~~~ 416 (435)
.+.+=+||++|..+|+++..+-+.++...-..
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~LD 44 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRNLD 44 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcCCC
Confidence 34577999999999999999999988875443
No 171
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=56.54 E-value=8.7 Score=37.31 Aligned_cols=51 Identities=20% Similarity=0.221 Sum_probs=39.3
Q ss_pred CcEEEEEeecCCCCCC--CCCccccCCCCeEEEEEEcCCceEEEEEEECCeeec
Q 013832 36 GRSVFLSGSFNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRH 87 (435)
Q Consensus 36 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~~ 87 (435)
....||+|++.+|... .+|.+....+|.|...+.|+.| ..|||.-...|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeeccCCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 4789999999876543 4777766678999999999766 5799988766543
No 172
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=51.06 E-value=15 Score=30.12 Aligned_cols=23 Identities=22% Similarity=0.557 Sum_probs=19.3
Q ss_pred EEEcCCc-eEEEEEEECCeeecCCC
Q 013832 67 IWSIPPG-YHQYKFCVDGEWRHDEH 90 (435)
Q Consensus 67 ~~~L~~g-~~~ykF~VDg~w~~d~~ 90 (435)
.+.|..| .|.|+| ++|+|+.+.+
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd 122 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGE 122 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTC
T ss_pred EEEecCCCEEEEEE-cCCEEEEccc
Confidence 3568889 999999 9999998754
No 173
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.67 E-value=18 Score=30.86 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=39.7
Q ss_pred eeEEEEecC--CCcEEEEEeecCCCCCC--CCCcccc-----CCCCeEEEEEEcCC-----c--eEEEEEEECCe
Q 013832 26 IPMRFVWPY--GGRSVFLSGSFNRWSEL--LPMSPVE-----GCPTVFQIIWSIPP-----G--YHQYKFCVDGE 84 (435)
Q Consensus 26 ~~~~f~w~~--~~~~V~l~Gsf~~W~~~--~~m~~~~-----~~~~~~~~~~~L~~-----g--~~~ykF~VDg~ 84 (435)
+.-++.-.+ -.|+|+|.=+|++|+.. +++.... .....|+..+.||+ + .+-.||.++|+
T Consensus 48 l~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~ 122 (156)
T 2eef_A 48 IAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQ 122 (156)
T ss_dssp EEEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTE
T ss_pred EEEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCC
Confidence 344444433 36999999999999965 3443321 12358999999886 3 66678889986
No 174
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=49.21 E-value=15 Score=36.93 Aligned_cols=54 Identities=24% Similarity=0.482 Sum_probs=39.0
Q ss_pred CcEEEEEeecCCCCCC-------CCCccccCCCCeEEEEEEcCCceEEEEEEECCeeecCCC
Q 013832 36 GRSVFLSGSFNRWSEL-------LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEH 90 (435)
Q Consensus 36 ~~~V~l~Gsf~~W~~~-------~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w~~d~~ 90 (435)
...++++|++++|... .+|.+....++.|...+.+..+ .+|||.-++.|-.+-.
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~G 320 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVNGTKGTFWGIFYFAAN-DQVKFAPQANWGNDFG 320 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECTTCTTEEEEEEEECTT-CEEEEESSSSSSSCBC
T ss_pred cceEEEEeecccCCCCCCCcccccccccccCcCceEEEEEEECCC-ceEEEEecCCcccccc
Confidence 4679999999987532 2344444567899999887654 5889999988876543
No 175
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=48.45 E-value=39 Score=26.96 Aligned_cols=60 Identities=15% Similarity=0.246 Sum_probs=42.5
Q ss_pred CceeeEEEEecCCC---cEEEEEe-ecCCCCCCCCCccccCCCCeEEEEE-EcCCceEEEEEEE-CCeeecC
Q 013832 23 TVLIPMRFVWPYGG---RSVFLSG-SFNRWSELLPMSPVEGCPTVFQIIW-SIPPGYHQYKFCV-DGEWRHD 88 (435)
Q Consensus 23 ~~~~~~~f~w~~~~---~~V~l~G-sf~~W~~~~~m~~~~~~~~~~~~~~-~L~~g~~~ykF~V-Dg~w~~d 88 (435)
+....+.+.+.+|+ ..|.|.| +=++|. ||+++ ...|+..- .-+.|-+.||+.. ||+|...
T Consensus 25 p~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~---~M~rn---Ga~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 25 PKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKK---GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp SSEEEEEEEEEBTTBCEEEEEEECTTCCCCE---ECEEE---TTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred ccEEEEEEEEeCCCCCEEEEEEEeCCCCcEe---Ecccc---CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 45566667776653 6789996 667884 78884 57899775 1245789999988 6777764
No 176
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=37.95 E-value=16 Score=32.83 Aligned_cols=49 Identities=18% Similarity=0.196 Sum_probs=35.0
Q ss_pred cEEEEEee--cCCCCCC--CCCccccCCCCeEEEEEEcCCceEEEEEEECCee
Q 013832 37 RSVFLSGS--FNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEW 85 (435)
Q Consensus 37 ~~V~l~Gs--f~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VDg~w 85 (435)
.+|+|+|+ -++|... .+|+.....++.|.....|..|.++++|..+..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCSSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeeccCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 46999998 4578754 4565433467889988999999877776655443
No 177
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=31.17 E-value=56 Score=34.21 Aligned_cols=51 Identities=18% Similarity=0.218 Sum_probs=36.2
Q ss_pred eeeEEEEecCC-CcEEEEEeecCCCCCCCCCccccCCCCe---EEEEEEcCCceEEEEEEE
Q 013832 25 LIPMRFVWPYG-GRSVFLSGSFNRWSELLPMSPVEGCPTV---FQIIWSIPPGYHQYKFCV 81 (435)
Q Consensus 25 ~~~~~f~w~~~-~~~V~l~Gsf~~W~~~~~m~~~~~~~~~---~~~~~~L~~g~~~ykF~V 81 (435)
.+.++|.=+.+ .++|.+.|. ..+||.+. .+.+. |++.++.+.....|+|.|
T Consensus 124 ~~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~-~~~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 124 RVHVLLRTQKGVIKGATFLGE-----KHVPMRKK-ASDELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp EEEEEEEEETTTEEEEEEESS-----SEEECEEE-EECSSEEEEEEEEECSCSCEEEEEEE
T ss_pred eEEEEEEcccCCcceEEEeCC-----CEEEEEEE-ecCCCeEEEEEEEECCCCceEEEEEE
Confidence 45566655444 578888764 34799876 34554 889998887788999988
No 178
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=29.04 E-value=19 Score=24.94 Aligned_cols=13 Identities=46% Similarity=0.864 Sum_probs=10.5
Q ss_pred ECCeeecCCCCCe
Q 013832 81 VDGEWRHDEHQPF 93 (435)
Q Consensus 81 VDg~w~~d~~~~~ 93 (435)
|||+|.+|+...+
T Consensus 48 vdgeWsYD~ATkT 60 (65)
T 1mhx_A 48 VDGEWTYDDAAKT 60 (65)
T ss_dssp CCSEEEEETTTTE
T ss_pred CccEEEecCceeE
Confidence 5899999987753
No 179
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=23.54 E-value=29 Score=24.23 Aligned_cols=12 Identities=42% Similarity=0.850 Sum_probs=9.7
Q ss_pred ECCeeecCCCCC
Q 013832 81 VDGEWRHDEHQP 92 (435)
Q Consensus 81 VDg~w~~d~~~~ 92 (435)
|||+|.+|+.-.
T Consensus 44 vdgew~yd~atk 55 (61)
T 1igd_A 44 VDGVWTYDDATK 55 (61)
T ss_dssp CCCEEEEETTTT
T ss_pred CCceEeecCcee
Confidence 589999998765
No 180
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=23.26 E-value=38 Score=30.34 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=19.2
Q ss_pred cCCCEEEEEcCCCcEEEEEeHHHHH
Q 013832 383 AQVSSIPIVDDNDSLLDIYCRSDIT 407 (435)
Q Consensus 383 ~~i~~lPVVD~~g~lvGiis~~DI~ 407 (435)
.+-|.=||+|.+|+++||-+.+|=.
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~~~ 148 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSNKQ 148 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC----
T ss_pred CCCCCCccCCCCCcEEEEEeccCCc
Confidence 4778889999999999999998843
No 181
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=22.93 E-value=20 Score=24.44 Aligned_cols=12 Identities=50% Similarity=1.002 Sum_probs=9.4
Q ss_pred ECCeeecCCCCC
Q 013832 81 VDGEWRHDEHQP 92 (435)
Q Consensus 81 VDg~w~~d~~~~ 92 (435)
|||+|.+|+.-.
T Consensus 39 vdgeW~YD~ATk 50 (56)
T 3fil_A 39 VDGEWTYDDATK 50 (56)
T ss_dssp CCCEEEEEGGGT
T ss_pred CccEEEecCcee
Confidence 588999988654
No 182
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=22.72 E-value=67 Score=33.97 Aligned_cols=56 Identities=18% Similarity=0.169 Sum_probs=35.9
Q ss_pred ceeeEEEEecCCCcEEEEEeecCCCCCCCCCccccCCCCeEEEEEEcCCceEEEEEEEC
Q 013832 24 VLIPMRFVWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVD 82 (435)
Q Consensus 24 ~~~~~~f~w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykF~VD 82 (435)
..+.++|.-+.+..+|.|...-..|.. .|....+....|+++++ +.+.+.|.|.++
T Consensus 132 ~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~Y~f~~~ 187 (696)
T 4aee_A 132 GEIIIRLIAPTEINEPLIDLGNEIREP--LTKHVVGDNIVYQYIIP-SRSILRYRFIFN 187 (696)
T ss_dssp TEEEEEEEEETTSCCCEEECSSCEECC--SEEEEETTEEEEEEEEE-CCSEEEEEEEEE
T ss_pred CEEEEEEEEcCCCCEEEEEcCCcceee--eeeeecCCceEEEEEEc-CCCeEEEEEEEE
Confidence 456677665556666777654344432 33333233458999999 777899999994
No 183
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=22.19 E-value=46 Score=24.08 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=15.1
Q ss_pred eecCCCCCCCCCccccCCCCeEEEEEEcCCc
Q 013832 43 GSFNRWSELLPMSPVEGCPTVFQIIWSIPPG 73 (435)
Q Consensus 43 Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g 73 (435)
|+|.+|+.. .|+.+ ++.-+..+.+|.|
T Consensus 1 ~~~s~W~qP-~lk~~---g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQP-ELESD---EHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCCC-EEEEE---TTEEEEEEECCSS
T ss_pred CCcccccCc-eeecC---CCCceEEEeCCCC
Confidence 799999873 44432 4667777777776
No 184
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=21.99 E-value=55 Score=25.88 Aligned_cols=17 Identities=24% Similarity=0.561 Sum_probs=13.4
Q ss_pred ceEEEEEEECCeeecCCCC
Q 013832 73 GYHQYKFCVDGEWRHDEHQ 91 (435)
Q Consensus 73 g~~~ykF~VDg~w~~d~~~ 91 (435)
| |+|.|. +|+|+++.+.
T Consensus 68 G-~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 68 G-YHFDLK-GDEWICDRSG 84 (106)
T ss_dssp E-EEEEEE-TTEEEETTTC
T ss_pred c-eeeeec-CCEEEECCCC
Confidence 6 888885 8999987654
No 185
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.75 E-value=1.4e+02 Score=22.95 Aligned_cols=66 Identities=11% Similarity=0.066 Sum_probs=40.1
Q ss_pred CCCCCCceeeEEEEecCCC--c--EEEEEeecCCCCCCCCCccccCCCCeEEEE-EEcCCceEEEEEEECCeee
Q 013832 18 ASVPDTVLIPMRFVWPYGG--R--SVFLSGSFNRWSELLPMSPVEGCPTVFQII-WSIPPGYHQYKFCVDGEWR 86 (435)
Q Consensus 18 ~~~~~~~~~~~~f~w~~~~--~--~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~-~~L~~g~~~ykF~VDg~w~ 86 (435)
+++.+....|+.|..+.++ . +|.|.+--. +. .+..-.+..+|.|.+. .+-.+|.|.-.-.++|+=.
T Consensus 9 ~~~~~~~~rp~~f~i~~~~g~~~ltv~V~~PsG--~~-~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~~I 79 (95)
T 2ee9_A 9 SDMNGLGFKPFDLVIPFAVRKGEITGEVHMPSG--KT-ATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHI 79 (95)
T ss_dssp CSSCSCCSCCCEEECSSCCCTTSEEEEEECTTS--CE-ECCEEEECSSSCEEEECCCCSSEEEEEEEEESSCBC
T ss_pred CCcccccccCEEEEeecCCCCCCEEEEEECCCC--Cc-cccEEEeCCCCeEEEEEEecCCEeEEEEEEECCEEC
Confidence 3333345678888887432 2 456665432 11 2222122467899988 4678899999999998633
No 186
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=21.56 E-value=60 Score=25.99 Aligned_cols=18 Identities=22% Similarity=0.364 Sum_probs=14.6
Q ss_pred EEEEEcCCCcEEEEEeHH
Q 013832 387 SIPIVDDNDSLLDIYCRS 404 (435)
Q Consensus 387 ~lPVVD~~g~lvGiis~~ 404 (435)
..||.|++|+++|+++..
T Consensus 105 ~~PV~~~~g~viGvv~vg 122 (131)
T 1p0z_A 105 KSPIQDATGKVIGIVSVG 122 (131)
T ss_dssp EEEEECTTCCEEEEEEEE
T ss_pred EEeEECCCCCEEEEEEEE
Confidence 369998889999998753
No 187
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=20.42 E-value=63 Score=26.33 Aligned_cols=19 Identities=21% Similarity=0.293 Sum_probs=15.2
Q ss_pred EEEEEcCCCcEEEEEeHHH
Q 013832 387 SIPIVDDNDSLLDIYCRSD 405 (435)
Q Consensus 387 ~lPVVD~~g~lvGiis~~D 405 (435)
..||.|++|+++|+++..-
T Consensus 110 ~~PV~~~~g~viGvv~vg~ 128 (142)
T 3by8_A 110 FTPIYDENHKQIGVVAIGL 128 (142)
T ss_dssp EEEEECTTSCEEEEEEEEE
T ss_pred EEeEEcCCCCEEEEEEEeE
Confidence 3599987899999987653
Done!