Query 013835
Match_columns 435
No_of_seqs 129 out of 1375
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 18:00:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013835.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013835hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iir_A Glycosyltransferase GTF 100.0 7.3E-46 2.5E-50 357.1 37.2 392 1-410 5-404 (415)
2 1rrv_A Glycosyltransferase GTF 100.0 5.3E-45 1.8E-49 351.4 37.3 391 1-409 5-404 (416)
3 3h4t_A Glycosyltransferase GTF 100.0 1.4E-44 4.8E-49 346.6 36.0 375 1-409 5-385 (404)
4 3hbf_A Flavonoid 3-O-glucosylt 100.0 8.3E-45 2.8E-49 347.7 22.3 376 1-405 18-452 (454)
5 4amg_A Snogd; transferase, pol 100.0 2.4E-44 8.3E-49 345.3 25.2 361 1-405 27-399 (400)
6 2vch_A Hydroquinone glucosyltr 100.0 1.9E-43 6.4E-48 344.2 30.2 380 1-406 11-468 (480)
7 2iya_A OLEI, oleandomycin glyc 100.0 1.7E-43 5.9E-48 341.8 29.6 389 1-408 17-423 (424)
8 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.4E-42 4.8E-47 339.2 25.4 383 1-406 13-478 (482)
9 2c1x_A UDP-glucose flavonoid 3 100.0 3.2E-42 1.1E-46 333.3 23.4 383 1-406 12-451 (456)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.2E-41 4.1E-46 328.1 25.1 379 1-407 25-414 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 3.7E-41 1.3E-45 323.3 26.4 383 1-407 9-399 (402)
12 2acv_A Triterpene UDP-glucosyl 100.0 1.4E-41 4.8E-46 329.7 22.5 369 1-405 14-461 (463)
13 2yjn_A ERYCIII, glycosyltransf 100.0 3.8E-41 1.3E-45 326.8 20.4 377 1-409 25-438 (441)
14 2p6p_A Glycosyl transferase; X 100.0 6.7E-41 2.3E-45 319.5 20.8 360 1-408 5-381 (384)
15 4fzr_A SSFS6; structural genom 100.0 8.7E-40 3E-44 313.3 22.6 359 1-403 20-397 (398)
16 2iyf_A OLED, oleandomycin glyc 100.0 3.8E-38 1.3E-42 305.0 28.3 381 1-409 12-402 (430)
17 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.5E-38 1.9E-42 300.1 20.2 362 1-407 6-389 (391)
18 3oti_A CALG3; calicheamicin, T 100.0 1.8E-38 6.3E-43 304.0 16.8 351 1-406 25-397 (398)
19 3otg_A CALG1; calicheamicin, T 100.0 1.1E-35 3.8E-40 286.1 23.5 365 1-407 25-409 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 4.4E-34 1.5E-38 269.2 16.5 333 2-408 8-358 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 2.3E-27 7.9E-32 198.9 17.7 159 227-389 6-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 2.5E-22 8.6E-27 189.5 22.8 334 2-412 12-361 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 3.3E-17 1.1E-21 146.4 17.1 110 241-356 158-273 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.7 1.4E-16 4.6E-21 136.5 9.2 126 239-372 27-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.5 1.2E-13 4.1E-18 130.5 15.5 155 240-406 198-366 (376)
26 3c48_A Predicted glycosyltrans 99.5 1.2E-12 4E-17 126.4 22.6 159 240-405 242-422 (438)
27 3dzc_A UDP-N-acetylglucosamine 99.5 1.1E-13 3.8E-18 131.3 14.8 152 240-402 230-395 (396)
28 3okp_A GDP-mannose-dependent a 99.5 4.8E-13 1.6E-17 127.1 19.2 159 240-409 197-380 (394)
29 1vgv_A UDP-N-acetylglucosamine 99.5 2.2E-13 7.5E-18 129.1 16.1 161 240-411 205-379 (384)
30 3ot5_A UDP-N-acetylglucosamine 99.5 3E-14 1E-18 135.3 7.9 158 239-407 223-394 (403)
31 4hwg_A UDP-N-acetylglucosamine 99.5 6.7E-13 2.3E-17 125.0 14.4 158 240-406 203-375 (385)
32 2jjm_A Glycosyl transferase, g 99.4 8E-13 2.7E-17 125.7 14.5 159 240-408 210-385 (394)
33 2r60_A Glycosyl transferase, g 99.4 7.1E-12 2.4E-16 123.0 20.7 111 288-405 333-456 (499)
34 2gek_A Phosphatidylinositol ma 99.4 1.4E-11 4.7E-16 117.5 21.6 155 241-406 208-381 (406)
35 3fro_A GLGA glycogen synthase; 99.4 2.2E-12 7.7E-17 124.2 15.4 160 241-409 251-431 (439)
36 3beo_A UDP-N-acetylglucosamine 99.4 1.1E-11 3.6E-16 117.0 19.2 156 240-406 205-374 (375)
37 2iuy_A Avigt4, glycosyltransfe 99.4 9.9E-13 3.4E-17 122.5 11.4 151 242-406 163-337 (342)
38 2x6q_A Trehalose-synthase TRET 99.3 3.7E-11 1.3E-15 115.0 18.5 159 240-407 230-413 (416)
39 2iw1_A Lipopolysaccharide core 99.3 5.7E-12 1.9E-16 118.8 8.8 156 240-405 195-368 (374)
40 1rzu_A Glycogen synthase 1; gl 99.2 1.1E-09 3.9E-14 106.8 19.5 154 241-407 291-474 (485)
41 3s28_A Sucrose synthase 1; gly 99.1 5.3E-10 1.8E-14 113.9 14.9 158 240-407 571-768 (816)
42 2qzs_A Glycogen synthase; glyc 99.1 5.8E-09 2E-13 101.8 18.8 157 240-409 291-477 (485)
43 2vsy_A XCC0866; transferase, g 99.0 2.8E-08 9.5E-13 99.0 21.8 162 241-407 377-558 (568)
44 2f9f_A First mannosyl transfer 99.0 3.8E-10 1.3E-14 94.3 6.4 135 241-386 23-175 (177)
45 3qhp_A Type 1 capsular polysac 98.6 4.5E-08 1.5E-12 80.5 7.1 144 241-396 2-162 (166)
46 3oy2_A Glycosyltransferase B73 98.6 1E-07 3.5E-12 90.8 10.6 158 240-407 183-389 (413)
47 2bfw_A GLGA glycogen synthase; 98.5 1.2E-06 4E-11 74.3 11.3 139 240-388 35-195 (200)
48 2x0d_A WSAF; GT4 family, trans 98.2 2.1E-07 7E-12 88.6 1.0 101 271-380 277-385 (413)
49 2hy7_A Glucuronosyltransferase 98.2 7.8E-06 2.7E-10 77.5 10.3 138 242-409 223-380 (406)
50 3rhz_A GTF3, nucleotide sugar 98.1 7.1E-06 2.4E-10 75.4 8.7 142 242-405 179-338 (339)
51 2xci_A KDO-transferase, 3-deox 98.1 1.8E-06 6.1E-11 81.0 4.7 95 290-390 260-361 (374)
52 3q3e_A HMW1C-like glycosyltran 97.9 6.2E-05 2.1E-09 73.5 12.1 144 241-388 441-602 (631)
53 4gyw_A UDP-N-acetylglucosamine 97.9 0.00018 6.1E-09 73.1 15.6 161 241-406 523-703 (723)
54 3vue_A GBSS-I, granule-bound s 97.8 3.4E-05 1.2E-09 75.7 8.0 155 241-407 327-510 (536)
55 3tov_A Glycosyl transferase fa 97.6 0.003 1E-07 58.3 16.8 132 239-373 184-345 (349)
56 1psw_A ADP-heptose LPS heptosy 97.4 0.001 3.5E-08 61.4 11.4 93 239-332 179-286 (348)
57 1uqt_A Alpha, alpha-trehalose- 97.3 0.0045 1.5E-07 59.6 15.2 105 292-408 333-454 (482)
58 3nb0_A Glycogen [starch] synth 96.7 0.006 2.1E-07 60.2 9.4 110 292-406 494-631 (725)
59 2gt1_A Lipopolysaccharide hept 96.5 0.022 7.4E-07 51.8 11.3 127 240-373 178-320 (326)
60 3t5t_A Putative glycosyltransf 96.1 0.032 1.1E-06 53.4 10.5 105 291-405 353-470 (496)
61 2iz6_A Molybdenum cofactor car 92.7 3.3 0.00011 33.4 13.8 129 232-373 37-172 (176)
62 3l7i_A Teichoic acid biosynthe 90.8 0.68 2.3E-05 47.1 8.8 114 288-409 596-722 (729)
63 2p90_A Hypothetical protein CG 86.3 7 0.00024 34.9 11.1 165 241-409 103-306 (319)
64 2wam_A RV2714, conserved hypot 84.1 4.9 0.00017 36.3 9.1 165 242-409 143-343 (351)
65 1g5t_A COB(I)alamin adenosyltr 81.6 13 0.00046 30.4 10.0 49 2-50 34-88 (196)
66 2i2c_A Probable inorganic poly 77.8 3 0.0001 36.5 5.3 53 305-374 34-92 (272)
67 3bbn_B Ribosomal protein S2; s 77.5 31 0.0011 29.0 11.9 31 95-125 157-189 (231)
68 3eag_A UDP-N-acetylmuramate:L- 77.0 13 0.00044 33.3 9.5 73 13-121 17-95 (326)
69 2khz_A C-MYC-responsive protei 74.4 21 0.00073 28.2 9.1 125 241-372 12-148 (165)
70 4fyk_A Deoxyribonucleoside 5'- 73.4 3.6 0.00012 32.2 4.1 127 241-373 3-140 (152)
71 2yvq_A Carbamoyl-phosphate syn 73.1 8.7 0.0003 29.7 6.3 86 12-122 38-131 (143)
72 3r8n_B 30S ribosomal protein S 73.0 38 0.0013 28.2 10.5 32 95-126 149-182 (218)
73 1fy2_A Aspartyl dipeptidase; s 70.6 20 0.0007 30.1 8.6 86 229-333 21-120 (229)
74 1yt5_A Inorganic polyphosphate 69.8 5.2 0.00018 34.6 4.8 54 304-374 39-95 (258)
75 2vqe_B 30S ribosomal protein S 69.6 50 0.0017 28.2 10.7 31 95-125 158-190 (256)
76 3pdi_B Nitrogenase MOFE cofact 67.8 13 0.00045 35.1 7.5 26 94-122 374-399 (458)
77 1l5x_A SurviVal protein E; str 66.7 9.2 0.00031 33.3 5.6 22 13-35 16-37 (280)
78 3tov_A Glycosyl transferase fa 66.7 28 0.00097 31.3 9.3 28 95-124 261-288 (349)
79 4hv4_A UDP-N-acetylmuramate--L 65.9 23 0.00079 33.8 8.9 27 95-121 81-110 (494)
80 3e35_A Uncharacterized protein 64.9 30 0.001 30.8 8.7 165 241-409 106-309 (325)
81 3sbx_A Putative uncharacterize 64.0 57 0.0019 26.4 9.9 96 233-334 37-146 (189)
82 3hn7_A UDP-N-acetylmuramate-L- 62.2 41 0.0014 32.3 10.0 73 13-122 32-110 (524)
83 2q5c_A NTRC family transcripti 61.3 14 0.00049 30.2 5.7 42 8-50 36-77 (196)
84 1psw_A ADP-heptose LPS heptosy 61.1 61 0.0021 28.8 10.5 28 95-124 261-288 (348)
85 1eiw_A Hypothetical protein MT 61.1 8.9 0.0003 28.1 3.8 65 304-374 36-109 (111)
86 3vue_A GBSS-I, granule-bound s 60.4 4.2 0.00015 39.5 2.6 27 5-33 26-52 (536)
87 3dm5_A SRP54, signal recogniti 60.2 28 0.00097 32.6 8.1 48 2-49 106-161 (443)
88 2xci_A KDO-transferase, 3-deox 58.9 34 0.0012 31.1 8.5 27 6-33 49-75 (374)
89 2jzc_A UDP-N-acetylglucosamine 58.2 20 0.00069 30.0 6.1 34 1-34 32-72 (224)
90 2f62_A Nucleoside 2-deoxyribos 56.9 50 0.0017 25.9 7.9 81 243-334 12-106 (161)
91 2yxb_A Coenzyme B12-dependent 56.7 50 0.0017 25.9 7.9 49 2-50 24-76 (161)
92 1u0t_A Inorganic polyphosphate 54.1 8.5 0.00029 34.2 3.3 54 303-373 72-129 (307)
93 2x0d_A WSAF; GT4 family, trans 53.8 4.3 0.00015 37.9 1.4 24 11-34 66-89 (413)
94 2an1_A Putative kinase; struct 53.6 9.9 0.00034 33.4 3.7 93 257-373 21-117 (292)
95 2hy7_A Glucuronosyltransferase 53.4 8.8 0.0003 35.6 3.4 20 13-33 33-52 (406)
96 3mcu_A Dipicolinate synthase, 51.3 24 0.00081 29.2 5.3 32 321-352 116-151 (207)
97 3lqk_A Dipicolinate synthase s 50.3 97 0.0033 25.3 8.9 109 240-351 8-152 (201)
98 3ehd_A Uncharacterized conserv 49.6 22 0.00075 28.1 4.6 30 304-333 67-104 (162)
99 2gk4_A Conserved hypothetical 48.9 65 0.0022 27.1 7.7 55 260-316 33-94 (232)
100 1kjn_A MTH0777; hypotethical p 48.4 16 0.00056 28.1 3.5 34 10-43 22-55 (157)
101 3s40_A Diacylglycerol kinase; 48.1 46 0.0016 29.2 7.2 81 242-335 12-98 (304)
102 2xw6_A MGS, methylglyoxal synt 47.5 46 0.0016 25.2 6.0 82 12-122 17-111 (134)
103 3oy2_A Glycosyltransferase B73 46.9 18 0.00063 33.2 4.6 28 6-34 13-40 (413)
104 2gt1_A Lipopolysaccharide hept 46.8 63 0.0021 28.5 8.0 28 95-124 253-280 (326)
105 2wqk_A 5'-nucleotidase SURE; S 45.2 17 0.00058 31.1 3.6 21 13-34 17-37 (251)
106 1u7z_A Coenzyme A biosynthesis 45.1 79 0.0027 26.4 7.7 53 260-316 38-97 (226)
107 3lk7_A UDP-N-acetylmuramoylala 44.8 69 0.0024 30.0 8.2 33 15-47 23-60 (451)
108 1b93_A Protein (methylglyoxal 44.2 99 0.0034 24.0 7.5 82 12-122 25-119 (152)
109 1s2d_A Purine trans deoxyribos 42.7 38 0.0013 26.9 5.1 92 241-333 8-116 (167)
110 1ccw_A Protein (glutamate muta 42.0 20 0.0007 27.2 3.4 49 2-50 9-61 (137)
111 2fpr_A Histidine biosynthesis 41.9 45 0.0015 26.4 5.6 21 13-33 47-67 (176)
112 3aek_B Light-independent proto 41.1 1.1E+02 0.0039 29.2 9.2 25 95-122 349-373 (525)
113 1w2w_B 5-methylthioribose-1-ph 40.8 47 0.0016 27.0 5.5 17 108-124 77-93 (191)
114 1rcu_A Conserved hypothetical 40.6 1.5E+02 0.005 24.1 10.0 93 232-334 50-150 (195)
115 1vi6_A 30S ribosomal protein S 40.4 1E+02 0.0035 25.3 7.4 31 95-125 115-147 (208)
116 3pdi_A Nitrogenase MOFE cofact 40.3 50 0.0017 31.4 6.4 29 91-122 397-425 (483)
117 2xxa_A Signal recognition part 40.1 64 0.0022 30.1 7.1 48 3-50 107-163 (433)
118 2ywr_A Phosphoribosylglycinami 39.9 1.6E+02 0.0054 24.3 10.1 39 12-50 14-58 (216)
119 1mio_B Nitrogenase molybdenum 39.3 1.3E+02 0.0043 28.3 9.1 29 91-122 381-409 (458)
120 3bch_A 40S ribosomal protein S 39.3 1.1E+02 0.0036 26.1 7.5 31 95-125 151-183 (253)
121 3afo_A NADH kinase POS5; alpha 39.1 22 0.00075 32.7 3.6 57 301-374 109-170 (388)
122 4gud_A Imidazole glycerol phos 39.0 1E+02 0.0035 25.0 7.6 65 240-333 3-79 (211)
123 2gk4_A Conserved hypothetical 38.4 24 0.00082 29.8 3.4 37 241-277 154-190 (232)
124 1wek_A Hypothetical protein TT 38.0 1.4E+02 0.0046 24.8 8.0 96 232-334 61-170 (217)
125 1vmd_A MGS, methylglyoxal synt 38.0 1.3E+02 0.0044 24.0 7.4 82 12-122 41-135 (178)
126 3qjg_A Epidermin biosynthesis 37.9 18 0.00062 29.0 2.5 33 6-38 14-46 (175)
127 1j6u_A UDP-N-acetylmuramate-al 37.4 1.3E+02 0.0044 28.3 8.8 35 13-47 25-61 (469)
128 3gem_A Short chain dehydrogena 37.0 1.1E+02 0.0038 25.8 7.8 38 13-50 40-79 (260)
129 2yvk_A Methylthioribose-1-phos 36.8 1.1E+02 0.0036 27.9 7.7 17 108-124 278-294 (374)
130 3fwz_A Inner membrane protein 36.7 33 0.0011 25.9 3.9 37 13-49 19-56 (140)
131 3qua_A Putative uncharacterize 36.5 1.7E+02 0.0059 23.8 10.4 97 232-334 45-155 (199)
132 3u7q_A Nitrogenase molybdenum- 36.3 1E+02 0.0036 29.2 8.0 27 94-123 416-442 (492)
133 1qgu_B Protein (nitrogenase mo 36.2 2E+02 0.0069 27.4 10.0 27 93-122 432-465 (519)
134 3pfn_A NAD kinase; structural 35.3 31 0.0011 31.3 3.9 54 303-373 105-162 (365)
135 1t9k_A Probable methylthioribo 35.0 1.1E+02 0.0038 27.5 7.5 39 12-50 168-215 (347)
136 2phj_A 5'-nucleotidase SURE; S 35.0 31 0.0011 29.4 3.6 23 11-34 15-37 (251)
137 2xdq_B Light-independent proto 33.5 1.5E+02 0.0051 28.3 8.6 27 94-123 371-397 (511)
138 2zkq_b 40S ribosomal protein S 33.5 1.3E+02 0.0044 26.2 7.3 32 95-126 118-151 (295)
139 2a0u_A Initiation factor 2B; S 33.0 1.2E+02 0.004 27.8 7.3 39 12-50 197-244 (383)
140 2lpm_A Two-component response 32.8 76 0.0026 23.4 5.2 31 94-124 52-87 (123)
141 3llv_A Exopolyphosphatase-rela 32.7 48 0.0016 24.8 4.2 37 13-49 18-55 (141)
142 3av3_A Phosphoribosylglycinami 32.5 2.1E+02 0.0071 23.5 11.0 39 12-50 16-60 (212)
143 3ezx_A MMCP 1, monomethylamine 32.5 1.4E+02 0.0048 24.6 7.3 48 2-49 98-149 (215)
144 3j20_B 30S ribosomal protein S 32.2 1.6E+02 0.0053 24.1 7.2 32 95-126 111-144 (202)
145 3bq9_A Predicted rossmann fold 31.7 1.6E+02 0.0055 27.5 8.0 43 291-333 228-285 (460)
146 2i2x_B MTAC, methyltransferase 31.7 49 0.0017 28.3 4.4 49 2-50 129-181 (258)
147 3io3_A DEHA2D07832P; chaperone 31.3 1.1E+02 0.0037 27.5 6.9 31 4-34 26-58 (348)
148 3kl4_A SRP54, signal recogniti 31.3 74 0.0025 29.7 5.9 34 2-35 103-136 (433)
149 1p9o_A Phosphopantothenoylcyst 31.3 29 0.00098 30.8 2.9 21 13-33 68-88 (313)
150 3lqk_A Dipicolinate synthase s 31.2 37 0.0013 27.9 3.4 33 5-37 15-48 (201)
151 1z0s_A Probable inorganic poly 31.1 73 0.0025 27.6 5.4 77 259-373 42-121 (278)
152 3i7m_A XAA-Pro dipeptidase; st 30.7 34 0.0012 25.8 3.0 32 8-39 1-32 (140)
153 2xzm_B RPS0E; ribosome, transl 30.6 1.3E+02 0.0045 25.3 6.7 31 95-125 114-146 (241)
154 1g63_A Epidermin modifying enz 30.5 20 0.00069 28.9 1.7 35 6-40 11-45 (181)
155 3ib6_A Uncharacterized protein 29.7 1.6E+02 0.0054 23.2 7.2 32 13-44 39-76 (189)
156 1j9j_A Stationary phase surviV 29.7 39 0.0013 28.8 3.3 22 13-35 16-37 (247)
157 3l8h_A Putative haloacid dehal 29.6 1.9E+02 0.0066 22.2 9.1 22 13-34 32-53 (179)
158 3i83_A 2-dehydropantoate 2-red 29.5 52 0.0018 29.1 4.5 34 14-48 15-48 (320)
159 2e6c_A 5'-nucleotidase SURE; S 29.2 36 0.0012 28.9 3.1 21 13-34 16-36 (244)
160 3hn2_A 2-dehydropantoate 2-red 29.0 61 0.0021 28.5 4.8 34 14-48 15-48 (312)
161 3mcu_A Dipicolinate synthase, 28.6 36 0.0012 28.0 2.9 31 6-36 14-45 (207)
162 2obn_A Hypothetical protein; s 28.5 3.2E+02 0.011 24.5 11.3 28 6-33 163-190 (349)
163 3zqu_A Probable aromatic acid 28.5 47 0.0016 27.4 3.6 33 10-42 17-49 (209)
164 1sbz_A Probable aromatic acid 28.4 44 0.0015 27.3 3.4 32 9-40 12-44 (197)
165 1p3d_A UDP-N-acetylmuramate--a 28.3 2.2E+02 0.0076 26.7 8.9 35 13-47 31-67 (475)
166 2eo2_A Adult MALE hypothalamus 28.3 73 0.0025 20.8 3.6 29 341-371 33-61 (71)
167 3e8x_A Putative NAD-dependent 28.2 87 0.003 25.8 5.5 37 14-50 35-73 (236)
168 3bfj_A 1,3-propanediol oxidore 28.2 3.3E+02 0.011 24.6 9.8 36 15-50 23-70 (387)
169 3ox4_A Alcohol dehydrogenase 2 28.2 1.2E+02 0.0042 27.5 6.8 38 13-50 19-66 (383)
170 1zu4_A FTSY; GTPase, signal re 28.0 1.9E+02 0.0063 25.6 7.8 31 4-34 113-143 (320)
171 3u5c_A 40S ribosomal protein S 27.8 77 0.0026 26.9 4.8 32 95-126 117-150 (252)
172 2q5c_A NTRC family transcripti 27.6 25 0.00085 28.7 1.8 43 305-348 50-93 (196)
173 2ekp_A 2-deoxy-D-gluconate 3-d 27.6 2.6E+02 0.0087 23.0 8.4 35 14-49 16-50 (239)
174 3igf_A ALL4481 protein; two-do 27.5 1.1E+02 0.0039 27.7 6.4 28 5-32 11-38 (374)
175 3ih5_A Electron transfer flavo 27.3 2.5E+02 0.0085 23.1 8.0 28 95-122 91-121 (217)
176 3auf_A Glycinamide ribonucleot 27.1 2.7E+02 0.0093 23.1 10.4 39 12-50 35-79 (229)
177 1mio_A Nitrogenase molybdenum 27.1 2.5E+02 0.0086 26.9 9.0 29 91-122 452-480 (533)
178 3u7q_B Nitrogenase molybdenum- 27.0 4.2E+02 0.014 25.3 13.6 27 93-122 436-469 (523)
179 2bru_C NAD(P) transhydrogenase 26.8 68 0.0023 25.3 3.9 47 3-49 35-93 (186)
180 3lyu_A Putative hydrogenase; t 26.8 52 0.0018 25.0 3.4 21 10-30 30-50 (142)
181 3c01_A Surface presentation of 26.6 1.1E+02 0.0037 18.4 4.2 30 361-390 2-32 (48)
182 1j8m_F SRP54, signal recogniti 26.2 2E+02 0.0067 25.0 7.5 47 3-49 105-159 (297)
183 2ejb_A Probable aromatic acid 26.0 58 0.002 26.3 3.7 44 4-48 9-53 (189)
184 2j37_W Signal recognition part 25.9 1.4E+02 0.0046 28.5 6.8 48 2-49 107-162 (504)
185 2obb_A Hypothetical protein; s 25.7 69 0.0024 24.5 3.9 38 12-49 28-71 (142)
186 3ew7_A LMO0794 protein; Q8Y8U8 25.5 94 0.0032 25.1 5.2 45 4-50 6-50 (221)
187 1u7z_A Coenzyme A biosynthesis 25.5 56 0.0019 27.3 3.6 21 13-33 37-57 (226)
188 3tqi_A GMP synthase [glutamine 25.5 71 0.0024 30.7 4.8 31 240-277 11-41 (527)
189 2bon_A Lipid kinase; DAG kinas 24.9 34 0.0012 30.6 2.3 68 257-335 44-119 (332)
190 1qv9_A F420-dependent methylen 24.8 59 0.002 27.3 3.4 32 93-124 62-99 (283)
191 3dfu_A Uncharacterized protein 24.7 1.5E+02 0.0051 24.8 6.1 34 361-394 186-219 (232)
192 3k5i_A Phosphoribosyl-aminoimi 24.6 4E+02 0.014 24.2 10.5 106 259-371 36-158 (403)
193 1jkx_A GART;, phosphoribosylgl 24.5 2.9E+02 0.0099 22.6 10.8 90 12-125 13-110 (212)
194 3sc4_A Short chain dehydrogena 24.2 3.3E+02 0.011 23.1 9.4 20 14-33 23-42 (285)
195 1p3y_1 MRSD protein; flavoprot 23.9 30 0.001 28.2 1.6 34 6-39 17-50 (194)
196 1pno_A NAD(P) transhydrogenase 23.6 83 0.0028 24.7 3.8 40 10-49 40-86 (180)
197 1q57_A DNA primase/helicase; d 23.4 3.8E+02 0.013 25.2 9.6 33 3-35 249-282 (503)
198 2pju_A Propionate catabolism o 23.4 32 0.0011 28.8 1.7 29 306-335 63-91 (225)
199 1qkk_A DCTD, C4-dicarboxylate 23.3 1.1E+02 0.0038 22.8 4.9 46 325-373 74-119 (155)
200 1rrm_A Lactaldehyde reductase; 23.2 2.9E+02 0.0099 25.0 8.4 36 15-50 21-66 (386)
201 1d4o_A NADP(H) transhydrogenas 23.1 86 0.0029 24.8 3.8 39 10-48 39-84 (184)
202 2bw0_A 10-FTHFDH, 10-formyltet 23.0 95 0.0033 27.7 4.8 37 14-50 35-79 (329)
203 3bgw_A DNAB-like replicative h 23.0 4.6E+02 0.016 24.3 10.0 33 2-34 203-235 (444)
204 3l4e_A Uncharacterized peptida 22.9 1.9E+02 0.0064 23.6 6.3 85 232-333 18-120 (206)
205 2qv7_A Diacylglycerol kinase D 22.9 56 0.0019 29.2 3.4 82 242-335 28-115 (337)
206 4as2_A Phosphorylcholine phosp 22.8 60 0.0021 28.9 3.5 23 11-33 146-168 (327)
207 3ecs_A Translation initiation 22.6 1.6E+02 0.0055 26.0 6.1 44 7-50 128-179 (315)
208 2lnd_A De novo designed protei 22.5 54 0.0019 21.9 2.3 48 324-373 49-99 (112)
209 2h3h_A Sugar ABC transporter, 22.5 3E+02 0.01 23.5 8.2 24 95-118 182-207 (313)
210 4b4o_A Epimerase family protei 22.4 58 0.002 28.2 3.4 29 3-33 5-33 (298)
211 1y80_A Predicted cobalamin bin 22.3 85 0.0029 25.6 4.2 29 3-31 95-123 (210)
212 1t5o_A EIF2BD, translation ini 22.1 2.1E+02 0.0073 25.6 7.0 16 109-124 251-266 (351)
213 3twe_A Alpha4H; unknown functi 22.1 83 0.0028 15.4 3.3 14 377-390 13-26 (27)
214 1meo_A Phosophoribosylglycinam 21.9 3.3E+02 0.011 22.2 10.8 39 12-50 13-57 (209)
215 4iin_A 3-ketoacyl-acyl carrier 21.7 3.6E+02 0.012 22.6 8.5 21 13-33 42-62 (271)
216 3bzy_A ESCU; auto cleavage pro 21.7 1.5E+02 0.0052 18.3 4.2 31 360-390 7-38 (54)
217 3hwr_A 2-dehydropantoate 2-red 21.4 67 0.0023 28.3 3.6 34 14-47 32-65 (318)
218 2ozl_B PDHE1-B, pyruvate dehyd 21.4 4.3E+02 0.015 23.4 9.7 50 313-373 280-339 (341)
219 3qi7_A Putative transcriptiona 21.1 3.3E+02 0.011 24.6 8.0 25 95-119 225-251 (371)
220 2gmw_A D,D-heptose 1,7-bisphos 21.0 2.6E+02 0.0089 22.4 7.0 22 13-34 55-76 (211)
221 4hn9_A Iron complex transport 20.9 64 0.0022 28.7 3.3 31 93-123 114-144 (335)
222 3ghy_A Ketopantoate reductase 20.9 76 0.0026 28.2 3.8 35 14-48 16-50 (335)
223 2fsv_C NAD(P) transhydrogenase 20.8 98 0.0034 24.9 3.8 40 10-49 63-109 (203)
224 1id1_A Putative potassium chan 20.8 1.4E+02 0.0047 22.6 4.9 24 8-33 12-35 (153)
225 3oti_A CALG3; calicheamicin, T 20.7 1.5E+02 0.0052 26.7 6.0 27 95-122 299-325 (398)
226 3gv0_A Transcriptional regulat 20.6 2.4E+02 0.0084 23.8 7.1 22 12-33 114-136 (288)
227 1djl_A Transhydrogenase DIII; 20.5 1E+02 0.0034 25.0 3.8 40 10-49 62-108 (207)
228 2ixd_A LMBE-related protein; h 20.5 3.8E+02 0.013 22.4 9.0 19 13-31 20-38 (242)
229 3uhj_A Probable glycerol dehyd 20.5 2.5E+02 0.0086 25.5 7.3 32 95-126 106-140 (387)
230 3kkj_A Amine oxidase, flavin-c 20.5 56 0.0019 27.2 2.8 17 14-30 15-31 (336)
231 3tl4_X Glutaminyl-tRNA synthet 20.4 83 0.0029 25.4 3.5 30 338-373 101-130 (187)
232 3evn_A Oxidoreductase, GFO/IDH 20.1 2.2E+02 0.0074 25.0 6.7 54 298-351 57-120 (329)
No 1
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.3e-46 Score=357.14 Aligned_cols=392 Identities=24% Similarity=0.377 Sum_probs=271.4
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccCCCCCCCCCchh-hHHHHHHHHHHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNKGFLPSGPSEIP-VQRNQMKEIIYSL 79 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (435)
|+++|+.||++|+++||++|+++||+|+|++++...+.+...|++|+.++....... ........ .....+.......
T Consensus 5 ~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 83 (415)
T 1iir_A 5 LATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPI-QRAKPLTAEDVRRFTTEAIATQ 83 (415)
T ss_dssp EECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC--------CCSCCCHHHHHHHHHHHHHHH
T ss_pred EEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcCCeeeeCCCCHHHHh-hcccccchHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999998888888889999999973211110 00001111 0111111111111
Q ss_pred HhhccCCCccCCcccCcCEEEeCC-cchh--HHHHHHHcCCCEEEeeccC-CCCCCCCCCCCcccCCC---ccchHHHHH
Q 013835 80 LPACRDPDLDSGIAFKADAIIANP-PAYG--HVHVAEALKIPIHIFFTMP-WTPTSEFPHPLSRVKQP---AGYRLSYQI 152 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~pDlVi~d~-~~~~--~~~~A~~~~iP~v~~~~~~-~~~~~~~p~~~~~~~~~---~~~~~~~~~ 152 (435)
+.... + ...+||+||+|. +..+ +..+|+.+|||+|.+++.+ +.....+|++......+ ..++.....
T Consensus 84 ~~~l~----~--~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~~~~~~ 157 (415)
T 1iir_A 84 FDEIP----A--AAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWER 157 (415)
T ss_dssp HHHHH----H--HTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC---------CHHHHHHHH
T ss_pred HHHHH----H--HhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCcccCCccCCccccchHHHHHHHHHH
Confidence 11111 0 135899999996 6677 8899999999999988766 33333444433211010 112222222
Q ss_pred HHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCCCCchHH
Q 013835 153 VDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESL 232 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~l 232 (435)
.+...+..+...++.+++ .++++....+.... ... ..+..+++.+.+.+.... ++.++||+.... .+..++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~--~~~-~~l~~~~~~l~~~~~~~~-~~~~vG~~~~~~--~~~~~~~~ 230 (415)
T 1iir_A 158 NNQSAYQRYGGLLNSHRD-AIGLPPVEDIFTFG--YTD-HPWVAADPVLAPLQPTDL-DAVQTGAWILPD--ERPLSPEL 230 (415)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTTCCCCCCHHHHH--HCS-SCEECSCTTTSCCCCCSS-CCEECCCCCCCC--CCCCCHHH
T ss_pred HHHHHHHHhHHHHHHHHH-HcCCCCCCcccccc--CCC-CEEEeeChhhcCCCcccC-CeEeeCCCccCc--ccCCCHHH
Confidence 333333334455566654 36655432111000 011 233334444433122222 899999986542 23567789
Q ss_pred HHHHHcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEEE
Q 013835 233 VKWLEAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVH 312 (435)
Q Consensus 233 ~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~ 312 (435)
.+|++.++++|||++||.. .+.+.++.++++++..+.+++|++|+.+.+ ....++|+++.+|+|+.+++++||+|||
T Consensus 231 ~~~l~~~~~~v~v~~Gs~~--~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-~~~~~~~v~~~~~~~~~~~l~~~d~~v~ 307 (415)
T 1iir_A 231 AAFLDAGPPPVYLGFGSLG--APADAVRVAIDAIRAHGRRVILSRGWADLV-LPDDGADCFAIGEVNHQVLFGRVAAVIH 307 (415)
T ss_dssp HHHHHTSSCCEEEECC-----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC-CSSCGGGEEECSSCCHHHHGGGSSEEEE
T ss_pred HHHHhhCCCeEEEeCCCCC--CcHHHHHHHHHHHHHCCCeEEEEeCCCccc-ccCCCCCEEEeCcCChHHHHhhCCEEEe
Confidence 9999877789999999986 356678889999999999999988765432 2456789999999999999999999999
Q ss_pred eCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHhhccC
Q 013835 313 HGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKVKERAVELAEAMEKED 392 (435)
Q Consensus 313 hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 392 (435)
|||+||++||+++|+|+|++|...||..||+++++.|+|+ .++.++++.++|.++|+++-|++++++++++++++...+
T Consensus 308 ~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 386 (415)
T 1iir_A 308 HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGV-AHDGPIPTFDSLSAALATALTPETHARATAVAGTIRTDG 386 (415)
T ss_dssp CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEE-ECSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHSCSCH
T ss_pred CCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcc-cCCcCCCCHHHHHHHHHHHcCHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999997 888778899999999999856899999999999998889
Q ss_pred cHHHHHHHHHHhccccCC
Q 013835 393 GVTGAVKAFFKHYSRSKT 410 (435)
Q Consensus 393 ~~~~~~~~i~~~l~~~~~ 410 (435)
+++++++.|++++++.+.
T Consensus 387 ~~~~~~~~i~~~~~~~~~ 404 (415)
T 1iir_A 387 AAVAARLLLDAVSREKPT 404 (415)
T ss_dssp HHHHHHHHHHHHHTC---
T ss_pred hHHHHHHHHHHHHhcccH
Confidence 999999999999876553
No 2
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.3e-45 Score=351.37 Aligned_cols=391 Identities=25% Similarity=0.350 Sum_probs=276.0
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccCCCCCCCCCchh-hHHHHHHHHHHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNKGFLPSGPSEIP-VQRNQMKEIIYSL 79 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (435)
|+++|+.||++|+++||++|+++||+|+|++++...+.+...|+++++++................ .....+.......
T Consensus 5 ~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (416)
T 1rrv_A 5 LSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMTVEMQ 84 (416)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred EEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCeeeecCCCHHHHHhhccccchhHHHHHHHHHHHHHH
Confidence 458899999999999999999999999999998888888899999999974311111000001111 1111111111222
Q ss_pred HhhccCCCccCCcccCcCEEEeCC-cchh--HHHHHHHcCCCEEEeeccC-CCCCCCCCCCCcccC---CCccchHHHHH
Q 013835 80 LPACRDPDLDSGIAFKADAIIANP-PAYG--HVHVAEALKIPIHIFFTMP-WTPTSEFPHPLSRVK---QPAGYRLSYQI 152 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~pDlVi~d~-~~~~--~~~~A~~~~iP~v~~~~~~-~~~~~~~p~~~~~~~---~~~~~~~~~~~ 152 (435)
+.... +. ..+||+||+|. ..++ +..+|+.+|||++.+.+.+ +.....+| +....+ ....++.....
T Consensus 85 ~~~l~----~~--~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~p-~~~~~~~~~~r~~n~~~~~~ 157 (416)
T 1rrv_A 85 FDAVP----GA--AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLP-PAYDEPTTPGVTDIRVLWEE 157 (416)
T ss_dssp HHHHH----HH--TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSC-CCBCSCCCTTCCCHHHHHHH
T ss_pred HHHHH----HH--hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcccC-CCCCCCCCchHHHHHHHHHH
Confidence 22211 00 35899999995 5666 7889999999999887665 33333344 211111 00123333333
Q ss_pred HHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCCCCchHH
Q 013835 153 VDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESL 232 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~l 232 (435)
.+...+..+...++.+++ .++++....+.. . .... ..+..+++.+.+....+ ++.++||+..+. .+..++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~-~-~~~~-~~l~~~~~~l~~~~~~~--~~~~vG~~~~~~--~~~~~~~~ 229 (416)
T 1rrv_A 158 RAARFADRYGPTLNRRRA-EIGLPPVEDVFG-Y-GHGE-RPLLAADPVLAPLQPDV--DAVQTGAWLLSD--ERPLPPEL 229 (416)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTTCCCCSCHHH-H-TTCS-SCEECSCTTTSCCCSSC--CCEECCCCCCCC--CCCCCHHH
T ss_pred HHHHHHHHhHHHHHHHHH-HcCCCCCCchhh-h-ccCC-CeEEccCccccCCCCCC--CeeeECCCccCc--cCCCCHHH
Confidence 344444444556666665 366654321110 0 0112 23443444443322222 789999986542 24457889
Q ss_pred HHHHHcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEEE
Q 013835 233 VKWLEAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVH 312 (435)
Q Consensus 233 ~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~ 312 (435)
.+|++.++++|||++||.......+.++.++++++..+.+++|.+|+.+.+ ....++|+.+.+|+|+.+++++||+|||
T Consensus 230 ~~~l~~~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-~~~~~~~v~~~~~~~~~~ll~~~d~~v~ 308 (416)
T 1rrv_A 230 EAFLAAGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV-LPDDRDDCFAIDEVNFQALFRRVAAVIH 308 (416)
T ss_dssp HHHHHSSSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC-CSCCCTTEEEESSCCHHHHGGGSSEEEE
T ss_pred HHHHhcCCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcccc-ccCCCCCEEEeccCChHHHhccCCEEEe
Confidence 999987778999999998643466778889999999999999988766433 3457889999999999999999999999
Q ss_pred eCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHhhccC
Q 013835 313 HGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKVKERAVELAEAMEKED 392 (435)
Q Consensus 313 hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 392 (435)
|||+||++||+++|+|+|++|...||..||+++++.|+|+ .++.++.+.++|.++|+++-|++++++++++++++...+
T Consensus 309 ~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 387 (416)
T 1rrv_A 309 HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGV-AHDGPTPTFESLSAALTTVLAPETRARAEAVAGMVLTDG 387 (416)
T ss_dssp CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEE-ECSSSCCCHHHHHHHHHHHTSHHHHHHHHHHTTTCCCCH
T ss_pred cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCcc-CCCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999997 888778899999999999866899999999999999888
Q ss_pred cHHHHHHHH-HHhccccC
Q 013835 393 GVTGAVKAF-FKHYSRSK 409 (435)
Q Consensus 393 ~~~~~~~~i-~~~l~~~~ 409 (435)
++ ++++.| |++++..+
T Consensus 388 ~~-~~~~~i~e~~~~~~~ 404 (416)
T 1rrv_A 388 AA-AAADLVLAAVGREKP 404 (416)
T ss_dssp HH-HHHHHHHHHHHC---
T ss_pred cH-HHHHHHHHHHhccCC
Confidence 99 999999 99887665
No 3
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.4e-44 Score=346.58 Aligned_cols=375 Identities=28% Similarity=0.405 Sum_probs=279.2
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccC--CCCCCCCCchh-hHHHHHHHHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNK--GFLPSGPSEIP-VQRNQMKEIIY 77 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~ 77 (435)
|++.|+.||++|+++||++|+++||+|+|++++.+.+.++..|++|++++..... .........+. .....+.....
T Consensus 5 i~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (404)
T 3h4t_A 5 ITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVAEWFD 84 (404)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHHHHHH
T ss_pred EEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999732111 00001111111 11122222222
Q ss_pred HHHhhccCCCccCCcccCcCEEEeCCcchh---HHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCccchHHHHHHH
Q 013835 78 SLLPACRDPDLDSGIAFKADAIIANPPAYG---HVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVD 154 (435)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~pDlVi~d~~~~~---~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 154 (435)
.+...+ .+||+||+|..... +..+|+.+|||++.++.+++..... ..+..+...+
T Consensus 85 ~l~~~~----------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~------------~~~~~~~~~~ 142 (404)
T 3h4t_A 85 KVPAAI----------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE------------QSQAERDMYN 142 (404)
T ss_dssp HHHHHH----------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG------------SCHHHHHHHH
T ss_pred HHHHHh----------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh------------hHHHHHHHHH
Confidence 222221 16999998844333 2689999999999987766532110 0123334455
Q ss_pred HHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCCCCchHHHH
Q 013835 155 SLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVK 234 (435)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~l~~ 234 (435)
...+..+...+++++. .+++++........ ..+.+ ...+++.+.+ ..++++++.++|++..+. ....++++.+
T Consensus 143 ~~~~~~~~~~~~~~~~-~lgl~~~~~~~~~~--~~~~~-l~~~~~~l~p-~~~~~~~~~~~G~~~~~~--~~~~~~~l~~ 215 (404)
T 3h4t_A 143 QGADRLFGDAVNSHRA-SIGLPPVEHLYDYG--YTDQP-WLAADPVLSP-LRPTDLGTVQTGAWILPD--QRPLSAELEG 215 (404)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCCCCCCHHHHH--HCSSC-EECSCTTTSC-CCTTCCSCCBCCCCCCCC--CCCCCHHHHH
T ss_pred HHHHHHhHHHHHHHHH-HcCCCCCcchhhcc--ccCCe-EEeeCcceeC-CCCCCCCeEEeCccccCC--CCCCCHHHHH
Confidence 5666677777888876 47877654321100 01111 2223344433 335677899999875543 3456788999
Q ss_pred HHHcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEEEeC
Q 013835 235 WLEAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVHHG 314 (435)
Q Consensus 235 ~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~hg 314 (435)
|++.++++|||++||... +.++++.+++++++.+.+++|.+|+.+.+. ...++|+++.+|+|+.++++++|+|||||
T Consensus 216 ~l~~~~~~Vlv~~Gs~~~--~~~~~~~~~~al~~~~~~vv~~~g~~~~~~-~~~~~~v~~~~~~~~~~ll~~~d~~v~~g 292 (404)
T 3h4t_A 216 FLRAGSPPVYVGFGSGPA--PAEAARVAIEAVRAQGRRVVLSSGWAGLGR-IDEGDDCLVVGEVNHQVLFGRVAAVVHHG 292 (404)
T ss_dssp HHHTSSCCEEECCTTSCC--CTTHHHHHHHHHHHTTCCEEEECTTTTCCC-SSCCTTEEEESSCCHHHHGGGSSEEEECC
T ss_pred HHhcCCCeEEEECCCCCC--cHHHHHHHHHHHHhCCCEEEEEeCCccccc-ccCCCCEEEecCCCHHHHHhhCcEEEECC
Confidence 998778899999999875 455778899999999999999988765333 24578999999999999999999999999
Q ss_pred CchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCcH
Q 013835 315 GAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKVKERAVELAEAMEKEDGV 394 (435)
Q Consensus 315 G~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~ 394 (435)
|+||+.||+++|+|+|++|...||..||+++++.|+|+ .++.++++.++|.++|+++++++++++++++++.+.+ +++
T Consensus 293 G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~-~l~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~-~~~ 370 (404)
T 3h4t_A 293 GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGV-AHDGPTPTVESLSAALATALTPGIRARAAAVAGTIRT-DGT 370 (404)
T ss_dssp CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEE-ECSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHTTCCC-CHH
T ss_pred cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEe-ccCcCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHhh-hHH
Confidence 99999999999999999999999999999999999997 8888888999999999999998999999999999999 999
Q ss_pred HHHHHHHHHhccccC
Q 013835 395 TGAVKAFFKHYSRSK 409 (435)
Q Consensus 395 ~~~~~~i~~~l~~~~ 409 (435)
+++++.|++.++..+
T Consensus 371 ~~~~~~i~~~~~~~~ 385 (404)
T 3h4t_A 371 TVAAKLLLEAISRQR 385 (404)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhhCC
Confidence 999999999987554
No 4
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=8.3e-45 Score=347.69 Aligned_cols=376 Identities=14% Similarity=0.168 Sum_probs=244.8
Q ss_pred CcccCCccchhHHHHHHHHHHHCC--CeEEEEeCCCcHHHHHh------cCceeEEccccccCCCCC-CCCC-chhhHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYG--HRVRLATHSNFKDFVLT------AGLEFYPLDMVKNKGFLP-SGPS-EIPVQRN 70 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rG--h~V~~~~~~~~~~~~~~------~g~~~~~i~~~~~~~~~~-~~~~-~~~~~~~ 70 (435)
++|+|++||++||+.||+.|+++| +.|||++++.....+.. .+++|+.++.....+... ..+. .+.....
T Consensus 18 ~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~~~~~~~~~~ 97 (454)
T 3hbf_A 18 VLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGNPREPIFLFIK 97 (454)
T ss_dssp EECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSCTTHHHHHHHH
T ss_pred EEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCChHHHHHHHHH
Confidence 579999999999999999999999 99999987643333322 358888886211111110 0010 1111111
Q ss_pred HHHHHHHHHHhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCC-------------------
Q 013835 71 QMKEIIYSLLPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTS------------------- 131 (435)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~------------------- 131 (435)
.....+...+...... ...+||+||+|.+..|+..+|+++|||.+.+++++.....
T Consensus 98 ~~~~~~~~~l~~~~~~-----~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~~~ 172 (454)
T 3hbf_A 98 AMQENFKHVIDEAVAE-----TGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHD 172 (454)
T ss_dssp HHHHHHHHHHHHHHHH-----HCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHHTT
T ss_pred HHHHHHHHHHHHHHhh-----cCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCcccc
Confidence 1111112222211100 0137999999999999999999999999999886542100
Q ss_pred -----CCCCCCc-ccCCCccchHHHHHHHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCC
Q 013835 132 -----EFPHPLS-RVKQPAGYRLSYQIVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKP 205 (435)
Q Consensus 132 -----~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (435)
.+|.... ...+....... ..+......+....+...+ ......++...++.+
T Consensus 173 ~~~~~~iPg~p~~~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~~--------------------~~~vl~ns~~eLE~~ 230 (454)
T 3hbf_A 173 VKSIDVLPGFPELKASDLPEGVIK--DIDVPFATMLHKMGLELPR--------------------ANAVAINSFATIHPL 230 (454)
T ss_dssp SSCBCCSTTSCCBCGGGSCTTSSS--CTTSHHHHHHHHHHHHGGG--------------------SSCEEESSCGGGCHH
T ss_pred ccccccCCCCCCcChhhCchhhcc--CCchHHHHHHHHHHHhhcc--------------------CCEEEECChhHhCHH
Confidence 0111100 00000000000 0000000111111111111 011222332222221
Q ss_pred -----CCCCCCCeeeecccccCCCC-CCCchHHHHHHHcC--CCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEc
Q 013835 206 -----KDWGPKVDVVGFCFLDLASN-YEPPESLVKWLEAG--SKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINK 277 (435)
Q Consensus 206 -----~~~~~~~~~vG~~~~~~~~~-~~~~~~l~~~~~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 277 (435)
++..+++.++||+....... ...++++.+|++.+ +++|||++||......++ +..++.+++..+++++|++
T Consensus 231 ~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~-~~el~~~l~~~~~~flw~~ 309 (454)
T 3hbf_A 231 IENELNSKFKLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHE-LTALAESLEECGFPFIWSF 309 (454)
T ss_dssp HHHHHHTTSSCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHH-HHHHHHHHHHHCCCEEEEC
T ss_pred HHHHHHhcCCCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHH-HHHHHHHHHhCCCeEEEEe
Confidence 33457899999997643321 23356799999964 369999999997766554 5779999999999999998
Q ss_pred CCCCCCCCC-----CCCCceEEcCCCChhhhccccc--EEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHc-C
Q 013835 278 GWGGLGNLA-----EPKDSIYLLDNIPHDWLFLQCK--AVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHAR-G 349 (435)
Q Consensus 278 ~~~~~~~~~-----~~~~~v~~~~~~p~~~~l~~~~--l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~-g 349 (435)
++...+.++ ..++|+++++|+||.+++++++ +|||||||||++||+++|||+|++|.+.||..||+++++. |
T Consensus 310 ~~~~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g 389 (454)
T 3hbf_A 310 RGDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLE 389 (454)
T ss_dssp CSCHHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSC
T ss_pred CCcchhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhC
Confidence 764322222 2467999999999999977666 9999999999999999999999999999999999999995 9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHhc-CH---HHHHHHHHHHHHhhcc---Cc-HHHHHHHHHHhc
Q 013835 350 VGPPPIPVDEFSLPKLINAINFML-DP---KVKERAVELAEAMEKE---DG-VTGAVKAFFKHY 405 (435)
Q Consensus 350 ~G~~~l~~~~~~~~~l~~~i~~ll-~~---~~~~~~~~~~~~~~~~---~~-~~~~~~~i~~~l 405 (435)
+|+ .++...++.++|.++|++++ |+ +||++++++++.+++. +| ..+..+.+.+.+
T Consensus 390 ~Gv-~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i 452 (454)
T 3hbf_A 390 IGV-GVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIV 452 (454)
T ss_dssp SEE-ECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred eeE-EecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHH
Confidence 998 88877889999999999999 86 8999999999998753 33 445665555444
No 5
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.4e-44 Score=345.28 Aligned_cols=361 Identities=19% Similarity=0.247 Sum_probs=231.4
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccCC--CCC------CCCCchhhHHHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNKG--FLP------SGPSEIPVQRNQM 72 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~~--~~~------~~~~~~~~~~~~~ 72 (435)
|+++|+.||++|+++||++|++|||+|+|++++.+.. +.+.|+.++++....... ... ............+
T Consensus 27 ~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (400)
T 4amg_A 27 FITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA-VAEAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSEGLGEGFF 105 (400)
T ss_dssp EECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH-HHTTTCEEEESSTTCCSHHHHSCCC------------CHHHH
T ss_pred EECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh-HHhcCCeeEecCCchhHhhhccccccccccccchhhhhHHHH
Confidence 5789999999999999999999999999999988766 456799998875211100 000 0000000001111
Q ss_pred HHHHHHHHhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCccchHHHHH
Q 013835 73 KEIIYSLLPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQI 152 (435)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 152 (435)
...+..........+.+.+++++||+||+|...+++.++|+.+|||.+.+...+... ....
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~----------------~~~~--- 166 (400)
T 4amg_A 106 AEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADS----------------EPGL--- 166 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTC----------------CHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeeccccccc----------------ccch---
Confidence 111112222222223345667799999999988888999999999998865432211 0000
Q ss_pred HHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCCCCchHH
Q 013835 153 VDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESL 232 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~l 232 (435)
.....+.+..... .+++........ ......+......+.....+..++ ..+... ..+..+
T Consensus 167 -----~~~~~~~l~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~------~~~~~~ 227 (400)
T 4amg_A 167 -----GALIRRAMSKDYE-RHGVTGEPTGSV--RLTTTPPSVEALLPEDRRSPGAWP-----MRYVPY------NGGAVL 227 (400)
T ss_dssp -----HHHHHHHTHHHHH-HTTCCCCCSCEE--EEECCCHHHHHTSCGGGCCTTCEE-----CCCCCC------CCCEEC
T ss_pred -----hhHHHHHHHHHHH-HhCCCcccccch--hhcccCchhhccCcccccCCcccC-----cccccc------cccccC
Confidence 0111122222222 133221111000 000000000001111111111111 111100 001111
Q ss_pred HHHHHc--CCCcEEEeeCCCCCCCh-HHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccE
Q 013835 233 VKWLEA--GSKPIYIGFGSLPVQEP-EKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKA 309 (435)
Q Consensus 233 ~~~~~~--~~~~v~v~~Gs~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l 309 (435)
.+|++. ++++|||++||...... ...+..+++++++.+.+++|..++.+.+....+++|+.+.+|+||.++++++|+
T Consensus 228 ~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~ 307 (400)
T 4amg_A 228 PDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWIPLGALLETCDA 307 (400)
T ss_dssp CTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCCCHHHHHTTCSE
T ss_pred cccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeecCHHHHhhhhhh
Confidence 224432 45699999999854322 234566889999999999999877766666778999999999999999999999
Q ss_pred EEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHh
Q 013835 310 VVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELAEAM 388 (435)
Q Consensus 310 ~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~ 388 (435)
||||||+||++||+++|||+|++|...||..||+++++.|+|+ .++..+.+. ++|+++| |++||++++++++++
T Consensus 308 ~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~-~l~~~~~~~----~al~~lL~d~~~r~~a~~l~~~~ 382 (400)
T 4amg_A 308 IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGF-DAEAGSLGA----EQCRRLLDDAGLREAALRVRQEM 382 (400)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEE-ECCTTTCSH----HHHHHHHHCHHHHHHHHHHHHHH
T ss_pred eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEE-EcCCCCchH----HHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 887766654 4677899 999999999999999
Q ss_pred hccCcHHHHHHHHHHhc
Q 013835 389 EKEDGVTGAVKAFFKHY 405 (435)
Q Consensus 389 ~~~~~~~~~~~~i~~~l 405 (435)
++.+++.++++.||++.
T Consensus 383 ~~~~~~~~~a~~le~lA 399 (400)
T 4amg_A 383 SEMPPPAETAAXLVALA 399 (400)
T ss_dssp HTSCCHHHHHHHHHHHC
T ss_pred HcCCCHHHHHHHHHHhh
Confidence 99999999999999863
No 6
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.9e-43 Score=344.16 Aligned_cols=380 Identities=14% Similarity=0.093 Sum_probs=238.0
Q ss_pred CcccCCccchhHHHHHHHHHHHC-CCeEEEEeCCC--cHHHHHh------cCceeEEccccccCCCCCCCCCchhh-HHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDY-GHRVRLATHSN--FKDFVLT------AGLEFYPLDMVKNKGFLPSGPSEIPV-QRN 70 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~r-Gh~V~~~~~~~--~~~~~~~------~g~~~~~i~~~~~~~~~~~~~~~~~~-~~~ 70 (435)
|+|+|++||++|+++||++|++| ||+|||+++.. +...+.. .+++|+.++....... ........ ...
T Consensus 11 ~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~--~~~~~~~~~~~~ 88 (480)
T 2vch_A 11 IIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDL--SSSTRIESRISL 88 (480)
T ss_dssp EECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTS--CTTCCHHHHHHH
T ss_pred EecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCC--CCchhHHHHHHH
Confidence 57899999999999999999998 99999998765 3333332 5899999873211110 11111111 000
Q ss_pred HH---HHHHHHHHhhccCCCccCCcccCc-CEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCC----------------
Q 013835 71 QM---KEIIYSLLPACRDPDLDSGIAFKA-DAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPT---------------- 130 (435)
Q Consensus 71 ~~---~~~~~~~~~~~~~~~~~~~~~~~p-DlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~---------------- 130 (435)
.. ...+..++.... ...++ |+||+|.+..++..+|+++|||.+.+++++....
T Consensus 89 ~~~~~~~~l~~ll~~~~-------~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 89 TVTRSNPELRKVFDSFV-------EGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHTTHHHHHHHHHHHH-------HTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHhhhHHHHHHHHHhc-------cCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 00 111111111110 12367 9999999888889999999999999987653210
Q ss_pred ----CCCCCCCcccCCCc--cchHHHHHHHHHHHHHHhHHHHHHHHhccCCC--CCCCCCCCCCCCCCCCeeEeeCCCCc
Q 013835 131 ----SEFPHPLSRVKQPA--GYRLSYQIVDSLIWLGIRDMINDVRKKKLKLR--PVTYLSGSQGFDSDVPHGYIWSPHLV 202 (435)
Q Consensus 131 ----~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (435)
...+..++..+.+. .....+...+. .+..+....+.+++ ..++. ....+. -+....+..
T Consensus 162 ~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~-~~g~~~nt~~ele--------~~~~~~l~~--- 228 (480)
T 2vch_A 162 FRELTEPLMLPGCVPVAGKDFLDPAQDRKDD-AYKWLLHNTKRYKE-AEGILVNTFFELE--------PNAIKALQE--- 228 (480)
T ss_dssp GGGCSSCBCCTTCCCBCGGGSCGGGSCTTSH-HHHHHHHHHHHGGG-CSEEEESCCTTTS--------HHHHHHHHS---
T ss_pred ccccCCcccCCCCCCCChHHCchhhhcCCch-HHHHHHHHHHhccc-CCEEEEcCHHHHh--------HHHHHHHHh---
Confidence 00000111100000 00000000000 11112222222222 11110 000000 000000000
Q ss_pred CCCCCCCCCCeeeecccccCCCC--CCCchHHHHHHHcC--CCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcC
Q 013835 203 PKPKDWGPKVDVVGFCFLDLASN--YEPPESLVKWLEAG--SKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKG 278 (435)
Q Consensus 203 ~~~~~~~~~~~~vG~~~~~~~~~--~~~~~~l~~~~~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~ 278 (435)
+.+..+++.++||+....... ...++++.+|++.+ +++|||++||......+ .+..++++++..+++++|+++
T Consensus 229 --~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~-~~~~~~~al~~~~~~~lw~~~ 305 (480)
T 2vch_A 229 --PGLDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCE-QLNELALGLADSEQRFLWVIR 305 (480)
T ss_dssp --CCTTCCCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHH-HHHHHHHHHHHTTCEEEEEEC
T ss_pred --cccCCCcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHH-HHHHHHHHHHhcCCcEEEEEC
Confidence 111136899999987543211 23466799999874 46999999999766554 557799999999999999987
Q ss_pred CCCC------------CCC-CCCCCce---------EEcCCCChhhhccccc--EEEEeCCchHHHHHHHhCCCEEeecC
Q 013835 279 WGGL------------GNL-AEPKDSI---------YLLDNIPHDWLFLQCK--AVVHHGGAGTTAAGLRAACPTTIVPF 334 (435)
Q Consensus 279 ~~~~------------~~~-~~~~~~v---------~~~~~~p~~~~l~~~~--l~I~hgG~~s~~Eal~~G~P~l~~P~ 334 (435)
+... ..+ ..+|+|+ ++.+|+||.+++++++ +||||||+||++||+++|||+|++|.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 306 SPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp CCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccc
Confidence 6431 122 2367774 4556999999975555 99999999999999999999999999
Q ss_pred CCChhhHHHHH-HHcCCCCCCCCCC---CCCHHHHHHHHHHhc-C---HHHHHHHHHHHHHhhc---cCcH-HHHHHHHH
Q 013835 335 FGDQPFWGERV-HARGVGPPPIPVD---EFSLPKLINAINFML-D---PKVKERAVELAEAMEK---EDGV-TGAVKAFF 402 (435)
Q Consensus 335 ~~dQ~~na~~v-~~~g~G~~~l~~~---~~~~~~l~~~i~~ll-~---~~~~~~~~~~~~~~~~---~~~~-~~~~~~i~ 402 (435)
+.||..||+++ ++.|+|+ .++.. .++.++|+++|++++ + ++||++++++++++++ .+|. .+.++.+.
T Consensus 386 ~~DQ~~na~~l~~~~G~g~-~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v 464 (480)
T 2vch_A 386 YAEQKMNAVLLSEDIRAAL-RPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVA 464 (480)
T ss_dssp STTHHHHHHHHHHTTCCEE-CCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHH
T ss_pred cccchHHHHHHHHHhCeEE-EeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999999997 7999998 78765 689999999999999 3 6899999999999887 6664 45555555
Q ss_pred Hhcc
Q 013835 403 KHYS 406 (435)
Q Consensus 403 ~~l~ 406 (435)
+.+.
T Consensus 465 ~~~~ 468 (480)
T 2vch_A 465 LKWK 468 (480)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 7
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.7e-43 Score=341.81 Aligned_cols=389 Identities=18% Similarity=0.171 Sum_probs=264.1
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccCCCCC-C-CCCchhhHHHHHHHHHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNKGFLP-S-GPSEIPVQRNQMKEIIYS 78 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 78 (435)
|+++|+.||++|+++||++|+++||+|+|++++.+.+.+...|++|++++......... . ...+.......+..
T Consensus 17 ~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (424)
T 2iya_A 17 FFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILPKESNPEESWPEDQESAMGLFLD---- 92 (424)
T ss_dssp EECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCCCSCCTTCTTCCCCSSHHHHHHHHHH----
T ss_pred EEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCccccccccchhhcchhHHHHHHHHHH----
Confidence 46889999999999999999999999999999988888889999999987321111000 0 01122111111111
Q ss_pred HHhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCCC--CCCC-CcccC-------CCc--cc
Q 013835 79 LLPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTSE--FPHP-LSRVK-------QPA--GY 146 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~--~p~~-~~~~~-------~~~--~~ 146 (435)
......+.+.+.+++++||+||+|.+.+++..+|+.+|||++.+++.+...... .+.. ...+. .+. ..
T Consensus 93 ~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (424)
T 2iya_A 93 EAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGD 172 (424)
T ss_dssp HHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC--------------
T ss_pred HHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccccccccccccccccc
Confidence 111222223345566799999999887888899999999999988765421110 0000 00000 000 00
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCC
Q 013835 147 RLSYQIVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNY 226 (435)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~ 226 (435)
........ ..+..+...++.++++ ++++. ... . .....+. .+..+++.+.+....+++++.++||+.....
T Consensus 173 ~~~~~~~~-~~~~~~~~~~~~~~~~-~g~~~-~~~-~-~~~~~~~-~l~~~~~~l~~~~~~~~~~~~~vGp~~~~~~--- 243 (424)
T 2iya_A 173 AEEGAEAE-DGLVRFFTRLSAFLEE-HGVDT-PAT-E-FLIAPNR-CIVALPRTFQIKGDTVGDNYTFVGPTYGDRS--- 243 (424)
T ss_dssp -------H-HHHHHHHHHHHHHHHH-TTCCS-CHH-H-HHHCCSS-EEESSCTTTSTTGGGCCTTEEECCCCCCCCG---
T ss_pred chhhhccc-hhHHHHHHHHHHHHHH-cCCCC-CHH-H-hccCCCc-EEEEcchhhCCCccCCCCCEEEeCCCCCCcc---
Confidence 00000000 0111222445555553 55541 110 0 0001111 2222334443333457788999999643211
Q ss_pred CCchHHHHHHH--cCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCC-CCCCCCCCCceEEcCCCChhhh
Q 013835 227 EPPESLVKWLE--AGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGG-LGNLAEPKDSIYLLDNIPHDWL 303 (435)
Q Consensus 227 ~~~~~l~~~~~--~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~-~~~~~~~~~~v~~~~~~p~~~~ 303 (435)
...+|++ .++++|||++||... ...+.+..+++++++.+.++++++|+.. .+.+..+++|+.+.+|+|+.++
T Consensus 244 ----~~~~~~~~~~~~~~v~v~~Gs~~~-~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~ 318 (424)
T 2iya_A 244 ----HQGTWEGPGDGRPVLLIALGSAFT-DHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQLDI 318 (424)
T ss_dssp ----GGCCCCCCCSSCCEEEEECCSSSC-CCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHHHH
T ss_pred ----cCCCCCccCCCCCEEEEEcCCCCc-chHHHHHHHHHHHhcCCcEEEEEECCcCChHHhccCCCCeEEecCCCHHHH
Confidence 0123433 245799999999873 3455677788999888889988887643 2334457889999999999999
Q ss_pred cccccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHH
Q 013835 304 FLQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAV 382 (435)
Q Consensus 304 l~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~ 382 (435)
++++|+||||||+||++||+++|+|+|++|...||..||+++++.|+|+ .++.++++.++|.++|++++ |++++++++
T Consensus 319 l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~-~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~ 397 (424)
T 2iya_A 319 LTKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGR-HIPRDQVTAEKLREAVLAVASDPGVAERLA 397 (424)
T ss_dssp HTTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEE-ECCGGGCCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HhhCCEEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEE-EcCcCCCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999997 78777789999999999999 999999999
Q ss_pred HHHHHhhccCcHHHHHHHHHHhcccc
Q 013835 383 ELAEAMEKEDGVTGAVKAFFKHYSRS 408 (435)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~i~~~l~~~ 408 (435)
++++++.+.++.+++++.|++++++.
T Consensus 398 ~~~~~~~~~~~~~~~~~~i~~~~~~~ 423 (424)
T 2iya_A 398 AVRQEIREAGGARAAADILEGILAEA 423 (424)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHhcc
Confidence 99999999999999999999987643
No 8
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.4e-42 Score=339.17 Aligned_cols=383 Identities=15% Similarity=0.168 Sum_probs=241.9
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHh----------cCceeEEccccccCCC-CCCCCCchhhHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLT----------AGLEFYPLDMVKNKGF-LPSGPSEIPVQR 69 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~----------~g~~~~~i~~~~~~~~-~~~~~~~~~~~~ 69 (435)
|+++|++||++|++.||++|++|||+|||++++.....+.. .+++|+.++....... ......++....
T Consensus 13 ~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~~~~~~~ 92 (482)
T 2pq6_A 13 MIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQDVPTLC 92 (482)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CCHHHHH
T ss_pred EecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcchhHHHHH
Confidence 57899999999999999999999999999987765444422 3899998872100000 000011111111
Q ss_pred HHH----HHHHHHHHhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCC------------CCCC
Q 013835 70 NQM----KEIIYSLLPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTP------------TSEF 133 (435)
Q Consensus 70 ~~~----~~~~~~~~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~------------~~~~ 133 (435)
..+ ...+..++..+.+. -...+||+||+|++..|+..+|+++|||.+.+++++... ....
T Consensus 93 ~~~~~~~~~~l~~ll~~l~~~----~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (482)
T 2pq6_A 93 QSVRKNFLKPYCELLTRLNHS----TNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGII 168 (482)
T ss_dssp HHHTTSSHHHHHHHHHHHHTC----SSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTCS
T ss_pred HHHHHHhhHHHHHHHHHHhhh----ccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCCC
Confidence 111 11111111111000 002489999999988898999999999999998765321 0112
Q ss_pred CCCCcc---------cC--CCccchHHHHHHHHHHH-----HHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEee
Q 013835 134 PHPLSR---------VK--QPAGYRLSYQIVDSLIW-----LGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIW 197 (435)
Q Consensus 134 p~~~~~---------~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 197 (435)
|..... .. .+............... ......+..... . .........+
T Consensus 169 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~vl~n 232 (482)
T 2pq6_A 169 PFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVAD--R--------------VNKDTTILLN 232 (482)
T ss_dssp SCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHH--T--------------CCTTCCEEES
T ss_pred CCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHH--h--------------hccCCEEEEc
Confidence 211100 00 00000000000000000 000000001111 0 0011123334
Q ss_pred CCCCcCCC-----CCCCCCCeeeeccccc--CC-----------CCCCCchHHHHHHHcC--CCcEEEeeCCCCCCChHH
Q 013835 198 SPHLVPKP-----KDWGPKVDVVGFCFLD--LA-----------SNYEPPESLVKWLEAG--SKPIYIGFGSLPVQEPEK 257 (435)
Q Consensus 198 ~~~~~~~~-----~~~~~~~~~vG~~~~~--~~-----------~~~~~~~~l~~~~~~~--~~~v~v~~Gs~~~~~~~~ 257 (435)
+...++.+ ++..+++.++||+... .. ..+..+.++.+|++.+ +++|||++||.......+
T Consensus 233 t~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 312 (482)
T 2pq6_A 233 TFNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQ 312 (482)
T ss_dssp SCGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHH
T ss_pred ChHHHhHHHHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHH
Confidence 43333322 3333789999998753 21 0112334688999864 369999999987655655
Q ss_pred HHHHHHHHHHHhCCeEEEEcCCCCC-C---CCCC-----CCCceEEcCCCChhhhc--ccccEEEEeCCchHHHHHHHhC
Q 013835 258 MTQIIVEAFEQTGQRGIINKGWGGL-G---NLAE-----PKDSIYLLDNIPHDWLF--LQCKAVVHHGGAGTTAAGLRAA 326 (435)
Q Consensus 258 ~~~~~~~~~~~~~~~~iv~~~~~~~-~---~~~~-----~~~~v~~~~~~p~~~~l--~~~~l~I~hgG~~s~~Eal~~G 326 (435)
+..++++++..+.+++|+++.... . .+++ .++|+++++|+||.+++ +++++||||||+||++||+++|
T Consensus 313 -~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~G 391 (482)
T 2pq6_A 313 -LLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAG 391 (482)
T ss_dssp -HHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHT
T ss_pred -HHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcC
Confidence 577899999999999999864321 0 1221 35799999999999996 5677899999999999999999
Q ss_pred CCEEeecCCCChhhHHHHHH-HcCCCCCCCCCCCCCHHHHHHHHHHhc-CH---HHHHHHHHHHHHhhcc---Cc-HHHH
Q 013835 327 CPTTIVPFFGDQPFWGERVH-ARGVGPPPIPVDEFSLPKLINAINFML-DP---KVKERAVELAEAMEKE---DG-VTGA 397 (435)
Q Consensus 327 ~P~l~~P~~~dQ~~na~~v~-~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~---~~~~~~~~~~~~~~~~---~~-~~~~ 397 (435)
||+|++|...||..||++++ +.|+|+ .++ .+++.++|.++|++++ |+ +||++++++++.+++. +| ..+.
T Consensus 392 vP~i~~P~~~dQ~~na~~~~~~~G~g~-~l~-~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~ 469 (482)
T 2pq6_A 392 VPMLCWPFFADQPTDCRFICNEWEIGM-EID-TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMN 469 (482)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTSCCEE-ECC-SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHH
T ss_pred CCEEecCcccchHHHHHHHHHHhCEEE-EEC-CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 99999999999999999997 789998 787 6789999999999999 88 6999999999998863 34 5678
Q ss_pred HHHHHHhcc
Q 013835 398 VKAFFKHYS 406 (435)
Q Consensus 398 ~~~i~~~l~ 406 (435)
++.+.+.+.
T Consensus 470 l~~~v~~~~ 478 (482)
T 2pq6_A 470 LNKVIKDVL 478 (482)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 887777664
No 9
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.2e-42 Score=333.35 Aligned_cols=383 Identities=17% Similarity=0.189 Sum_probs=236.7
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCe--EEEEeCCCcHHHHH-------hcCceeEEccccccCCCCCC-CCCc-hhhHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHR--VRLATHSNFKDFVL-------TAGLEFYPLDMVKNKGFLPS-GPSE-IPVQR 69 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~--V~~~~~~~~~~~~~-------~~g~~~~~i~~~~~~~~~~~-~~~~-~~~~~ 69 (435)
++|+|++||++|+++||+.|++|||+ ||+++.+.....+. ..++.|+.++.......... .... +....
T Consensus 12 ~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~~~~~~~~ 91 (456)
T 2c1x_A 12 VLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQEDIELFT 91 (456)
T ss_dssp EECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTHHHHHHH
T ss_pred EEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChHHHHHHHH
Confidence 57999999999999999999999765 57777653222221 14788888862111110000 1100 11111
Q ss_pred HHHHHHHHHHHhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCC------------CCCC---
Q 013835 70 NQMKEIIYSLLPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPT------------SEFP--- 134 (435)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~------------~~~p--- 134 (435)
......+...+.... +.. ..+||+||+|.+..++..+|+++|||.+.+++.+.... ...+
T Consensus 92 ~~~~~~~~~~l~~l~----~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (456)
T 2c1x_A 92 RAAPESFRQGMVMAV----AET-GRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQ 166 (456)
T ss_dssp HHHHHHHHHHHHHHH----HHH-TCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCCT
T ss_pred HHhHHHHHHHHHHHH----hcc-CCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcccc
Confidence 111111111222111 000 24899999998888889999999999999987632100 0000
Q ss_pred ----CCCcccCCCccchHH---HHHHHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCC--
Q 013835 135 ----HPLSRVKQPAGYRLS---YQIVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKP-- 205 (435)
Q Consensus 135 ----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 205 (435)
......+.....+.. ...........+.....++... . +. ......++...++.+
T Consensus 167 ~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~-~--~~-------------~~~vl~ns~~~le~~~~ 230 (456)
T 2c1x_A 167 GREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQV-L--PK-------------ATAVFINSFEELDDSLT 230 (456)
T ss_dssp TCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHH-G--GG-------------SSCEEESSCGGGCHHHH
T ss_pred cccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHh-h--hh-------------CCEEEECChHHHhHHHH
Confidence 000000000000000 0000000000001111111110 0 00 011222332222221
Q ss_pred ---CCCCCCCeeeecccccCCCC-CCCchHHHHHHHcC--CCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCC
Q 013835 206 ---KDWGPKVDVVGFCFLDLASN-YEPPESLVKWLEAG--SKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGW 279 (435)
Q Consensus 206 ---~~~~~~~~~vG~~~~~~~~~-~~~~~~l~~~~~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~ 279 (435)
++..+++.++||+....... ...+.++.+|++.+ +++|||++||...... +.++.++++++..+.+++|++++
T Consensus 231 ~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~-~~~~~~~~~l~~~~~~~lw~~~~ 309 (456)
T 2c1x_A 231 NDLKSKLKTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPP-AEVVALSEALEASRVPFIWSLRD 309 (456)
T ss_dssp HHHHHHSSCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCH-HHHHHHHHHHHHHTCCEEEECCG
T ss_pred HHHHhcCCCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCH-HHHHHHHHHHHhcCCeEEEEECC
Confidence 22236899999987543221 12234588999864 4699999999976554 45677889999899999999876
Q ss_pred CCCCCCCC-----CCCceEEcCCCChhhhcc--cccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHc-CCC
Q 013835 280 GGLGNLAE-----PKDSIYLLDNIPHDWLFL--QCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHAR-GVG 351 (435)
Q Consensus 280 ~~~~~~~~-----~~~~v~~~~~~p~~~~l~--~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~-g~G 351 (435)
...+.+++ .++|+++++|+||.++++ ++|+||||||+||++||+++|||+|++|...||..||+++++. |+|
T Consensus 310 ~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g 389 (456)
T 2c1x_A 310 KARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIG 389 (456)
T ss_dssp GGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCE
T ss_pred cchhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeE
Confidence 53222322 257899999999999965 8999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhc-CH---HHHHHHHHHHHHhhcc---Cc-HHHHHHHHHHhcc
Q 013835 352 PPPIPVDEFSLPKLINAINFML-DP---KVKERAVELAEAMEKE---DG-VTGAVKAFFKHYS 406 (435)
Q Consensus 352 ~~~l~~~~~~~~~l~~~i~~ll-~~---~~~~~~~~~~~~~~~~---~~-~~~~~~~i~~~l~ 406 (435)
+ .++..+++.++|.++|++++ |+ +||++++++++.+++. +| ..+.++.+.+.+.
T Consensus 390 ~-~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 390 V-RIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp E-ECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred E-EecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 8 78777889999999999999 87 8999999999998763 44 4566666665553
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.2e-41 Score=328.09 Aligned_cols=379 Identities=16% Similarity=0.157 Sum_probs=261.8
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccCCCCC---CCCCchhhHHHHHHH-HH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNKGFLP---SGPSEIPVQRNQMKE-II 76 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~-~~ 76 (435)
|++.++.||++|+++||++|+++||+|+|++++.+.+.+...|++++.++......... .....+. .+.. +.
T Consensus 25 ~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 100 (415)
T 3rsc_A 25 IVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGV----RPHLMYL 100 (415)
T ss_dssp EECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCH----HHHHHHH
T ss_pred EEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccccccccccchhhccccHHH----HHHHHHH
Confidence 46789999999999999999999999999999989999999999999987321100000 0000000 0111 11
Q ss_pred HHHHhhccCCCccCCcccCcCEEEeC-CcchhHHHHHHHcCCCEEEeeccCCCCCCCCCCC--CcccCCCccchHHHHHH
Q 013835 77 YSLLPACRDPDLDSGIAFKADAIIAN-PPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHP--LSRVKQPAGYRLSYQIV 153 (435)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~pDlVi~d-~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~ 153 (435)
. ........+.+.+++++||+||+| +..+++.++|+.+|||++.+.+...... .++.. ...........
T Consensus 101 ~-~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~-~~~~~~~~~~~~~~~~p~------ 172 (415)
T 3rsc_A 101 R-ENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE-HYSFSQDMVTLAGTIDPL------ 172 (415)
T ss_dssp H-HHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-SCCHHHHHHHHHTCCCGG------
T ss_pred H-HHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-ccccccccccccccCChh------
Confidence 1 111111223345667899999999 8888889999999999998764433211 11110 00000000000
Q ss_pred HHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCCCCchHHH
Q 013835 154 DSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESLV 233 (435)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~l~ 233 (435)
.+......++.++. .++++...... .....+. ....+++.+.+....++.++.++||+..... ...
T Consensus 173 ---~~~~~~~~~~~~~~-~~g~~~~~~~~--~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~-------~~~ 238 (415)
T 3rsc_A 173 ---DLPVFRDTLRDLLA-EHGLSRSVVDC--WNHVEQL-NLVFVPKAFQIAGDTFDDRFVFVGPCFDDRR-------FLG 238 (415)
T ss_dssp ---GCHHHHHHHHHHHH-HTTCCCCHHHH--HTCCCSE-EEESSCTTTSTTGGGCCTTEEECCCCCCCCG-------GGC
T ss_pred ---hHHHHHHHHHHHHH-HcCCCCChhhh--hcCCCCe-EEEEcCcccCCCcccCCCceEEeCCCCCCcc-------cCc
Confidence 01112233444444 25544211100 0001011 2222344443433445677899998753221 111
Q ss_pred HHH--HcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCC-CCCCCCCCCCceEEcCCCChhhhcccccEE
Q 013835 234 KWL--EAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWG-GLGNLAEPKDSIYLLDNIPHDWLFLQCKAV 310 (435)
Q Consensus 234 ~~~--~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~-~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~ 310 (435)
+|. ..++++|||++||..... .+++..+++++++.+.++++.+|.. +.+.+..+++|+++.+|+|+.+++++||+|
T Consensus 239 ~~~~~~~~~~~v~v~~Gs~~~~~-~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~ 317 (415)
T 3rsc_A 239 EWTRPADDLPVVLVSLGTTFNDR-PGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVLEQATVC 317 (415)
T ss_dssp CCCCCSSCCCEEEEECTTTSCCC-HHHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCCTTEEEESCCCHHHHHHHEEEE
T ss_pred CccccCCCCCEEEEECCCCCCCh-HHHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCCCcEEEEecCCHHHHHhhCCEE
Confidence 222 234579999999986544 3567888999988888999888765 334455678999999999999999999999
Q ss_pred EEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHhh
Q 013835 311 VHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELAEAME 389 (435)
Q Consensus 311 I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~ 389 (435)
|||||+||++||+++|+|+|++|...||..||+++++.|+|+ .+..+++++++|.++|++++ |++++++++++++++.
T Consensus 318 v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~-~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~ 396 (415)
T 3rsc_A 318 VTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGA-VLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVR 396 (415)
T ss_dssp EESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEE-ECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred EECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEE-EcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997 88888889999999999999 9999999999999999
Q ss_pred ccCcHHHHHHHHHHhccc
Q 013835 390 KEDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 390 ~~~~~~~~~~~i~~~l~~ 407 (435)
+.++++++++.|++++.+
T Consensus 397 ~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 397 RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HSCHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHhhc
Confidence 999999999999998753
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3.7e-41 Score=323.30 Aligned_cols=383 Identities=16% Similarity=0.135 Sum_probs=262.2
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccCCCCCCCCCchhhHHHHHHH-HHHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKE-IIYSL 79 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (435)
|+++++.||++|+++||++|+++||+|+|++++.+.+.+...|++++.++............. .......+.. +.. .
T Consensus 9 ~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~ 86 (402)
T 3ia7_A 9 FANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVK-QEDAETQLHLVYVR-E 86 (402)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSC-CTTHHHHHHHHHHH-H
T ss_pred EEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEeccccccccccccccc-ccchHHHHHHHHHH-H
Confidence 467899999999999999999999999999998888889999999999973221111000000 0011111111 111 1
Q ss_pred HhhccCCCccCCcccCcCEEEeC-CcchhHHHHHHHcCCCEEEeeccCCCCCCCCCC-CCcccCCCccchHHHHHHHHHH
Q 013835 80 LPACRDPDLDSGIAFKADAIIAN-PPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPH-PLSRVKQPAGYRLSYQIVDSLI 157 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~pDlVi~d-~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
.......+.+.+++++||+||+| +..+++..+|+.+|||+|.+.+..+......+. ...........+ .
T Consensus 87 ~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 157 (402)
T 3ia7_A 87 NVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPA---------D 157 (402)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCCCGG---------G
T ss_pred HHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccccccccccccccChh---------h
Confidence 11112223345566799999999 788888899999999999886443322111110 000000000000 0
Q ss_pred HHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCCCCchHHHHHH-
Q 013835 158 WLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWL- 236 (435)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~l~~~~- 236 (435)
+..+...++.++. .++++...... .....+. ....+++.+.+....++.++.++||+...... ...|.
T Consensus 158 ~~~~~~~~~~~~~-~~g~~~~~~~~--~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~~-------~~~~~~ 226 (402)
T 3ia7_A 158 VEAVHSVLVDLLG-KYGVDTPVKEY--WDEIEGL-TIVFLPKSFQPFAETFDERFAFVGPTLTGRDG-------QPGWQP 226 (402)
T ss_dssp SHHHHHHHHHHHH-TTTCCSCHHHH--HTCCCSC-EEESSCGGGSTTGGGCCTTEEECCCCCCC-----------CCCCC
T ss_pred HHHHHHHHHHHHH-HcCCCCChhhh--hcCCCCe-EEEEcChHhCCccccCCCCeEEeCCCCCCccc-------CCCCcc
Confidence 1112333444444 24543211100 0001111 22223343333333456788999986532211 11222
Q ss_pred -HcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCC-CCCCCCCCCCceEEcCCCChhhhcccccEEEEeC
Q 013835 237 -EAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWG-GLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVHHG 314 (435)
Q Consensus 237 -~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~-~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~hg 314 (435)
..++++|||++||...... +.+..+++++++.+.++++.+|.. ..+.+.+.++|+++.+|+|+.+++++||++||||
T Consensus 227 ~~~~~~~v~v~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll~~ad~~v~~~ 305 (402)
T 3ia7_A 227 PRPDAPVLLVSLGNQFNEHP-EFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVLAHARACLTHG 305 (402)
T ss_dssp SSTTCCEEEEECCSCSSCCH-HHHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESCCCHHHHHTTEEEEEECC
T ss_pred cCCCCCEEEEECCCCCcchH-HHHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecCCCHHHHHhhCCEEEECC
Confidence 2345799999999965543 567888899988888999888765 3344556789999999999999999999999999
Q ss_pred CchHHHHHHHhCCCEEeecC-CCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHhhccC
Q 013835 315 GAGTTAAGLRAACPTTIVPF-FGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELAEAMEKED 392 (435)
Q Consensus 315 G~~s~~Eal~~G~P~l~~P~-~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~~~ 392 (435)
|+||++||+++|+|+|++|. ..||..|++.+++.|+|+ .+..+++++++|.+++.+++ |++++++++++++++.+.+
T Consensus 306 G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~-~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 384 (402)
T 3ia7_A 306 TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGS-VLRPDQLEPASIREAVERLAADSAVRERVRRMQRDILSSG 384 (402)
T ss_dssp CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEE-ECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEE-EccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999 999999999999999997 88888889999999999999 9999999999999999999
Q ss_pred cHHHHHHHHHHhccc
Q 013835 393 GVTGAVKAFFKHYSR 407 (435)
Q Consensus 393 ~~~~~~~~i~~~l~~ 407 (435)
+++++++.|+++++.
T Consensus 385 ~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 385 GPARAADEVEAYLGR 399 (402)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhh
Confidence 999999999998864
No 12
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.4e-41 Score=329.70 Aligned_cols=369 Identities=12% Similarity=0.145 Sum_probs=236.7
Q ss_pred CcccCCccchhHHHHHHHHHHHC--CCeEEEEeCCCc-----HHHHHh-----cCceeEEccccccCCCCCCC--CCchh
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDY--GHRVRLATHSNF-----KDFVLT-----AGLEFYPLDMVKNKGFLPSG--PSEIP 66 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~r--Gh~V~~~~~~~~-----~~~~~~-----~g~~~~~i~~~~~~~~~~~~--~~~~~ 66 (435)
++|+|++||++|+++||+.|++| ||+|||+++... ...+.. .+++|+.++... .+.. .....
T Consensus 14 ~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~~~~~~~~~~~ 89 (463)
T 2acv_A 14 FIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVE----PPPQELLKSPE 89 (463)
T ss_dssp EECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCC----CCCGGGGGSHH
T ss_pred EEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCC----CCcccccCCcc
Confidence 57999999999999999999999 999999986653 333433 589999987321 0110 00111
Q ss_pred hHHHHHHHHHHHHHhhccCCCccCC---cccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCC--------C----
Q 013835 67 VQRNQMKEIIYSLLPACRDPDLDSG---IAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPT--------S---- 131 (435)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~--------~---- 131 (435)
.. +..... .....+.+.+ +..+||+||+|.+..++..+|+++|||.+++++++.... .
T Consensus 90 ~~---~~~~~~----~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (463)
T 2acv_A 90 FY---ILTFLE----SLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEE 162 (463)
T ss_dssp HH---HHHHHH----HTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTC
T ss_pred HH---HHHHHH----hhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccC
Confidence 00 111111 1111111122 225899999999888889999999999999886533110 0
Q ss_pred -----C----CCCCCcccCCCccc-hHHHHHHHH-HHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeC-C
Q 013835 132 -----E----FPHPLSRVKQPAGY-RLSYQIVDS-LIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWS-P 199 (435)
Q Consensus 132 -----~----~p~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~ 199 (435)
. .+..++ +..+... .+.....++ ..+..+....+.+++ ... ...++ .
T Consensus 163 ~~~~~~~~~~~~~~pg-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~-------------~l~nt~~ 221 (463)
T 2acv_A 163 VFDDSDRDHQLLNIPG-ISNQVPSNVLPDACFNKDGGYIAYYKLAERFRD-------TKG-------------IIVNTFS 221 (463)
T ss_dssp CCCCSSGGGCEECCTT-CSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTT-------SSE-------------EEESCCH
T ss_pred CCCCccccCceeECCC-CCCCCChHHCchhhcCCchHHHHHHHHHHhccc-------CCE-------------EEECCHH
Confidence 0 000000 0000000 000000000 011111111111111 000 00011 0
Q ss_pred CCcCC--------CCCCCCCCeeeecccccCC-CC-C---CCchHHHHHHHcC--CCcEEEeeCCCC-CCChHHHHHHHH
Q 013835 200 HLVPK--------PKDWGPKVDVVGFCFLDLA-SN-Y---EPPESLVKWLEAG--SKPIYIGFGSLP-VQEPEKMTQIIV 263 (435)
Q Consensus 200 ~~~~~--------~~~~~~~~~~vG~~~~~~~-~~-~---~~~~~l~~~~~~~--~~~v~v~~Gs~~-~~~~~~~~~~~~ 263 (435)
++.+. ..+ ++++.++||+..... .. . ..++++.+|++.+ +++|||++||.. .... +.++.++
T Consensus 222 ele~~~~~~l~~~~~p-~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~-~~~~~~~ 299 (463)
T 2acv_A 222 DLEQSSIDALYDHDEK-IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGP-SQIREIA 299 (463)
T ss_dssp HHHHHHHHHHHHHCTT-SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCH-HHHHHHH
T ss_pred HHhHHHHHHHHhcccc-CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCH-HHHHHHH
Confidence 01000 001 568999999865431 10 1 2346789999864 369999999997 5544 4567789
Q ss_pred HHHHHhCCeEEEEcCCCCCCCCCC-----C--CCceEEcCCCChhhhc--ccccEEEEeCCchHHHHHHHhCCCEEeecC
Q 013835 264 EAFEQTGQRGIINKGWGGLGNLAE-----P--KDSIYLLDNIPHDWLF--LQCKAVVHHGGAGTTAAGLRAACPTTIVPF 334 (435)
Q Consensus 264 ~~~~~~~~~~iv~~~~~~~~~~~~-----~--~~~v~~~~~~p~~~~l--~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~ 334 (435)
++++..+++++|++++.. +.+++ . ++|+++++|+||.+++ +++++||||||+||++||+++|||+|++|.
T Consensus 300 ~~l~~~~~~~l~~~~~~~-~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~ 378 (463)
T 2acv_A 300 LGLKHSGVRFLWSNSAEK-KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPI 378 (463)
T ss_dssp HHHHHHTCEEEEECCCCG-GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCC
T ss_pred HHHHhCCCcEEEEECCCc-ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccc
Confidence 999999999999997630 11211 2 6789999999999995 589999999999999999999999999999
Q ss_pred CCChhhHHHHH-HHcCCCCCCC-C---CC--CCCHHHHHHHHHHhc-C-HHHHHHHHHHHHHhhc---cCc-HHHHHHHH
Q 013835 335 FGDQPFWGERV-HARGVGPPPI-P---VD--EFSLPKLINAINFML-D-PKVKERAVELAEAMEK---EDG-VTGAVKAF 401 (435)
Q Consensus 335 ~~dQ~~na~~v-~~~g~G~~~l-~---~~--~~~~~~l~~~i~~ll-~-~~~~~~~~~~~~~~~~---~~~-~~~~~~~i 401 (435)
..||..||+++ ++.|+|+ .+ + .. .++.++|.++|++++ + ++||++++++++.+++ .+| ..+.++.+
T Consensus 379 ~~dQ~~Na~~lv~~~g~g~-~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~ 457 (463)
T 2acv_A 379 YAEQQLNAFRLVKEWGVGL-GLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKL 457 (463)
T ss_dssp STTHHHHHHHHHHTSCCEE-ESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHcCeEE-EEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 99999999995 8999998 77 2 34 679999999999999 4 7999999999999886 455 45666666
Q ss_pred HHhc
Q 013835 402 FKHY 405 (435)
Q Consensus 402 ~~~l 405 (435)
.+.+
T Consensus 458 v~~~ 461 (463)
T 2acv_A 458 IDDI 461 (463)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=3.8e-41 Score=326.82 Aligned_cols=377 Identities=16% Similarity=0.186 Sum_probs=245.3
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccC-CCC-C-----------CC-----C
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNK-GFL-P-----------SG-----P 62 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~-~-----------~~-----~ 62 (435)
|+++|+.||++|+++||++|+++||+|+|++++.+.+.+...|++|++++...+. ... . .. +
T Consensus 25 ~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (441)
T 2yjn_A 25 FSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSLDFSERDP 104 (441)
T ss_dssp EECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTTCCCTTCCG
T ss_pred EEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCCCceeecCCccchHHHhhhhhcccccccccccccccCc
Confidence 4678999999999999999999999999999988888888999999999732100 000 0 00 0
Q ss_pred CchhhHHHHHHH---HHHHHHh-----h-ccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCC-C
Q 013835 63 SEIPVQRNQMKE---IIYSLLP-----A-CRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTS-E 132 (435)
Q Consensus 63 ~~~~~~~~~~~~---~~~~~~~-----~-~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~-~ 132 (435)
.. .....+.. .....+. . ....+.+.+++++||+||+|...+++.++|+.+|||+|.+...+..... .
T Consensus 105 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~~~~~~~~ 182 (441)
T 2yjn_A 105 AT--LTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHARLLWGPDITTRAR 182 (441)
T ss_dssp GG--GSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEEEECSSCCHHHHHH
T ss_pred ch--hhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEEEEecCCCcchhhh
Confidence 00 00111111 1111101 0 1122233456779999999987778899999999999987421100000 0
Q ss_pred --CCCCCcccCCCccchHHHHHHHHHHHHHHhHHHHHHHHhccCC-CCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCC
Q 013835 133 --FPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMINDVRKKKLKL-RPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWG 209 (435)
Q Consensus 133 --~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (435)
++....+.+... .+..+.+.++.++. .+++ +....+. ..+. ....+++.+.+ +..++
T Consensus 183 ~~~~~~~~~~~~~~------------~~~~~~~~l~~~~~-~~g~~~~~~~~~-----~~~~-~l~~~~~~~~~-~~~~~ 242 (441)
T 2yjn_A 183 QNFLGLLPDQPEEH------------REDPLAEWLTWTLE-KYGGPAFDEEVV-----VGQW-TIDPAPAAIRL-DTGLK 242 (441)
T ss_dssp HHHHHHGGGSCTTT------------CCCHHHHHHHHHHH-HTTCCCCCGGGT-----SCSS-EEECSCGGGSC-CCCCC
T ss_pred hhhhhhcccccccc------------ccchHHHHHHHHHH-HcCCCCCCcccc-----CCCe-EEEecCccccC-CCCCC
Confidence 000000000000 00012233444444 3555 3222110 0111 11212222221 22221
Q ss_pred C-CCeeeecccccCCCCCCCchHHHHHHHc--CCCcEEEeeCCCCCC--ChHHHHHHHHHHHHHhCCeEEEEcCCCCCCC
Q 013835 210 P-KVDVVGFCFLDLASNYEPPESLVKWLEA--GSKPIYIGFGSLPVQ--EPEKMTQIIVEAFEQTGQRGIINKGWGGLGN 284 (435)
Q Consensus 210 ~-~~~~vG~~~~~~~~~~~~~~~l~~~~~~--~~~~v~v~~Gs~~~~--~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~ 284 (435)
. .+.++++ ..+.++.+|++. ++++|||++||.... ...+.+..++++++..+.+++|.+++...+.
T Consensus 243 ~~~~~~~~~---------~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~ 313 (441)
T 2yjn_A 243 TVGMRYVDY---------NGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEG 313 (441)
T ss_dssp EEECCCCCC---------CSSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSS
T ss_pred CCceeeeCC---------CCCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhh
Confidence 1 1222211 112224467753 346899999998643 1233556678888888899998887665555
Q ss_pred CCCCCCceEEcCCCChhhhcccccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHH
Q 013835 285 LAEPKDSIYLLDNIPHDWLFLQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPK 364 (435)
Q Consensus 285 ~~~~~~~v~~~~~~p~~~~l~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~ 364 (435)
+...++|+++.+|+|+.+++++||+||||||+||++||+++|+|+|++|...||..||+++++.|+|+ .++.++++.++
T Consensus 314 l~~~~~~v~~~~~~~~~~ll~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~-~~~~~~~~~~~ 392 (441)
T 2yjn_A 314 VANIPDNVRTVGFVPMHALLPTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGI-ALPVPELTPDQ 392 (441)
T ss_dssp CSSCCSSEEECCSCCHHHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEE-ECCTTTCCHHH
T ss_pred hccCCCCEEEecCCCHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEE-EcccccCCHHH
Confidence 55678899999999999999999999999999999999999999999999999999999999999997 88888889999
Q ss_pred HHHHHHHhc-CHHHHHHHHHHHHHhhccCcHHHHHHHHHHhccccC
Q 013835 365 LINAINFML-DPKVKERAVELAEAMEKEDGVTGAVKAFFKHYSRSK 409 (435)
Q Consensus 365 l~~~i~~ll-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 409 (435)
|.++|++++ |++++++++++++++.+.++++++++.|+++++...
T Consensus 393 l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 438 (441)
T 2yjn_A 393 LRESVKRVLDDPAHRAGAARMRDDMLAEPSPAEVVGICEELAAGRR 438 (441)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcc
Confidence 999999999 999999999999999999999999999999886543
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=6.7e-41 Score=319.53 Aligned_cols=360 Identities=16% Similarity=0.128 Sum_probs=246.7
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccc--cC-CC----CCCCC-CchhhHHHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVK--NK-GF----LPSGP-SEIPVQRNQM 72 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~--~~-~~----~~~~~-~~~~~~~~~~ 72 (435)
|++.++.||++|+++||++|+++||+|++++++...+.+...|++++.++... .. .. .+... ... .....+
T Consensus 5 ~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 83 (384)
T 2p6p_A 5 FVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDP-VAQARF 83 (384)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSH-HHHHHH
T ss_pred EEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhcccCccccCcch-HHHHHH
Confidence 45788999999999999999999999999998888788888999999986321 00 00 00000 000 101111
Q ss_pred -HHHHHHHHhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCccchHHHH
Q 013835 73 -KEIIYSLLPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQ 151 (435)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 151 (435)
..++..........+.+.+++++||+||+|...+++..+|+.+|||++.+...+.. + .. ..
T Consensus 84 ~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-----~---~~------~~---- 145 (384)
T 2p6p_A 84 TGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-----A---DG------IH---- 145 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-----C---TT------TH----
T ss_pred HHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-----c---ch------hh----
Confidence 11111111111222234456679999999977777789999999999987532211 0 00 00
Q ss_pred HHHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCC-CCCeeeecccccCCCCCCCch
Q 013835 152 IVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWG-PKVDVVGFCFLDLASNYEPPE 230 (435)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~ 230 (435)
..+...++.++. .++++.... .+ ......+..+..+.+++ .++.++++ . .+.
T Consensus 146 -------~~~~~~~~~~~~-~~g~~~~~~--------~~--~~l~~~~~~~~~~~~~~~~~~~~~~~---~------~~~ 198 (384)
T 2p6p_A 146 -------PGADAELRPELS-ELGLERLPA--------PD--LFIDICPPSLRPANAAPARMMRHVAT---S------RQC 198 (384)
T ss_dssp -------HHHHHHTHHHHH-HTTCSSCCC--------CS--EEEECSCGGGSCTTSCCCEECCCCCC---C------CCC
T ss_pred -------HHHHHHHHHHHH-HcCCCCCCC--------CC--eEEEECCHHHCCCCCCCCCceEecCC---C------CCC
Confidence 011223344443 245432211 01 11112222222222222 23333321 0 112
Q ss_pred HHHHHHHc--CCCcEEEeeCCCCCC---C-hHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhc
Q 013835 231 SLVKWLEA--GSKPIYIGFGSLPVQ---E-PEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLF 304 (435)
Q Consensus 231 ~l~~~~~~--~~~~v~v~~Gs~~~~---~-~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l 304 (435)
++.+|++. ++++|||++||.... + +.+.+..+++++++.+.+++|.+|+...+.+..+++|+.+ +|+|+.+++
T Consensus 199 ~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~~~~l 277 (384)
T 2p6p_A 199 PLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARV-GWTPLDVVA 277 (384)
T ss_dssp BCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTSEE-ECCCHHHHG
T ss_pred CCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCCCCceEE-cCCCHHHHH
Confidence 34467764 346899999998653 1 2345677889998888999988765322222235789999 999999999
Q ss_pred ccccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHH
Q 013835 305 LQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVE 383 (435)
Q Consensus 305 ~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~ 383 (435)
+++|+||||||+||++||+++|+|+|++|...||..|++++++.|+|+ .++.++.+.++|.++|++++ |+++++++++
T Consensus 278 ~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~-~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 356 (384)
T 2p6p_A 278 PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAI-ALLPGEDSTEAIADSCQELQAKDTYARRAQD 356 (384)
T ss_dssp GGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEE-ECCTTCCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeE-ecCcCCCCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999997 78877789999999999999 9999999999
Q ss_pred HHHHhhccCcHHHHHHHHHHhcccc
Q 013835 384 LAEAMEKEDGVTGAVKAFFKHYSRS 408 (435)
Q Consensus 384 ~~~~~~~~~~~~~~~~~i~~~l~~~ 408 (435)
+++++.+.++++++++.|++++.++
T Consensus 357 ~~~~~~~~~~~~~~~~~i~~~~~~~ 381 (384)
T 2p6p_A 357 LSREISGMPLPATVVTALEQLAHHH 381 (384)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHhhhc
Confidence 9999999999999999999998654
No 15
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=8.7e-40 Score=313.27 Aligned_cols=359 Identities=19% Similarity=0.198 Sum_probs=230.0
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccC-----CCCCCC----CCchhhHHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNK-----GFLPSG----PSEIPVQRNQ 71 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~-----~~~~~~----~~~~~~~~~~ 71 (435)
|++.++.||++|+++||++|+++||+|++++++.+.+.+...|++++.++...+. ...... ..........
T Consensus 20 ~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (398)
T 4fzr_A 20 VIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTMPREEKPLLEH 99 (398)
T ss_dssp EECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCCCSSHHHHHHH
T ss_pred EEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCcccccccchhhHHHH
Confidence 4678899999999999999999999999999988889999999999998621000 000000 0011111111
Q ss_pred HHHHHHHHHhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCccchHHHH
Q 013835 72 MKEIIYSLLPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQ 151 (435)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 151 (435)
....+..........+.+.+++++||+|++|+..+++.++|+.+|||++.+...... ...
T Consensus 100 ~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~-----------------~~~--- 159 (398)
T 4fzr_A 100 IGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLAS-----------------PEL--- 159 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-----------------CHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCC-----------------chh---
Confidence 222222222222333445567789999999987788889999999999986532110 000
Q ss_pred HHHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCCCCchH
Q 013835 152 IVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPES 231 (435)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 231 (435)
.. ......++.... .++++.... .+ .....+++.+..........+.++++. ..+..
T Consensus 160 -~~----~~~~~~l~~~~~-~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 216 (398)
T 4fzr_A 160 -IK----SAGVGELAPELA-ELGLTDFPD--------PL-LSIDVCPPSMEAQPKPGTTKMRYVPYN--------GRNDQ 216 (398)
T ss_dssp -HH----HHHHHHTHHHHH-TTTCSSCCC--------CS-EEEECSCGGGC----CCCEECCCCCCC--------CSSCC
T ss_pred -hh----HHHHHHHHHHHH-HcCCCCCCC--------CC-eEEEeCChhhCCCCCCCCCCeeeeCCC--------CCCCC
Confidence 00 011222333333 345442211 01 011111221111100000111222220 01122
Q ss_pred HHHHHHc--CCCcEEEeeCCCCCCC-------hHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhh
Q 013835 232 LVKWLEA--GSKPIYIGFGSLPVQE-------PEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDW 302 (435)
Q Consensus 232 l~~~~~~--~~~~v~v~~Gs~~~~~-------~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~ 302 (435)
+.+|+.. ++++|||++|+..... ..+.+..+++++++.+.++++.+++...+.+..+++|+++.+|+|+.+
T Consensus 217 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ 296 (398)
T 4fzr_A 217 VPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPLSA 296 (398)
T ss_dssp CCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC--------CCTTEEEESCCCHHH
T ss_pred CchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhccCCCcEEEeCcCCHHH
Confidence 3345543 4579999999985432 344677788999888999998887765555667789999999999999
Q ss_pred hcccccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHH
Q 013835 303 LFLQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERA 381 (435)
Q Consensus 303 ~l~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~ 381 (435)
++++||+||||||.||+.||+++|+|+|++|...||..|++++++.|+|+ .++.+++++++|.++|.+++ |+++++++
T Consensus 297 ll~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~-~~~~~~~~~~~l~~ai~~ll~~~~~~~~~ 375 (398)
T 4fzr_A 297 IMPACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGV-EVPWEQAGVESVLAACARIRDDSSYVGNA 375 (398)
T ss_dssp HGGGCSEEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEE-ECC-------CHHHHHHHHHHCTHHHHHH
T ss_pred HHhhCCEEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEE-ecCcccCCHHHHHHHHHHHHhCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997 88888888999999999999 99999999
Q ss_pred HHHHHHhhccCcHHHHHHHHHH
Q 013835 382 VELAEAMEKEDGVTGAVKAFFK 403 (435)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~i~~ 403 (435)
++.++++.+.++++++++.+++
T Consensus 376 ~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 376 RRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHcCCCHHHHHHHHhc
Confidence 9999999999999999998864
No 16
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.8e-38 Score=305.04 Aligned_cols=381 Identities=18% Similarity=0.152 Sum_probs=250.1
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccCCCCCC--CCCchhhHHHHHHHHHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNKGFLPS--GPSEIPVQRNQMKEIIYS 78 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 78 (435)
|+++++.||++|+++||++|+++||+|++++++...+.+...|++++.++.......... ....+......+...
T Consensus 12 ~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 88 (430)
T 2iyf_A 12 MFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLND--- 88 (430)
T ss_dssp EECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHHHHH---
T ss_pred EEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCccccccccccchhhHHHHHHHHHH---
Confidence 357889999999999999999999999999998887778889999998873211111000 001111111111111
Q ss_pred HHhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCccchHHHHHH-HHHH
Q 013835 79 LLPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIV-DSLI 157 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~ 157 (435)
.......+.+.+++++||+||+|+..+++..+|+.+|||+|.+++..+... .++ .. + ... .+... +...
T Consensus 89 -~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~-~~~---~~---~-~~~-~~~~~~~~~~ 158 (430)
T 2iyf_A 89 -AIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWK-GYE---EE---V-AEP-MWREPRQTER 158 (430)
T ss_dssp -HHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCT-THH---HH---T-HHH-HHHHHHHSHH
T ss_pred -HHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccc-ccc---cc---c-ccc-hhhhhccchH
Confidence 111112233445667999999997777778999999999998875443110 000 00 0 000 00000 0000
Q ss_pred HHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCC-CCCCCC-CeeeecccccCCCCCCCchHHHHH
Q 013835 158 WLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKP-KDWGPK-VDVVGFCFLDLASNYEPPESLVKW 235 (435)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~vG~~~~~~~~~~~~~~~l~~~ 235 (435)
...+...++++..+ ++++. .. .. .....+. ...+++..+..+ ..++++ +.++||....... ..+|
T Consensus 159 ~~~~~~~~~~~~~~-~g~~~-~~-~~-~~~~~~~--~l~~~~~~~~~~~~~~~~~~v~~vG~~~~~~~~-------~~~~ 225 (430)
T 2iyf_A 159 GRAYYARFEAWLKE-NGITE-HP-DT-FASHPPR--SLVLIPKALQPHADRVDEDVYTFVGACQGDRAE-------EGGW 225 (430)
T ss_dssp HHHHHHHHHHHHHH-TTCCS-CH-HH-HHHCCSS--EEECSCGGGSTTGGGSCTTTEEECCCCC------------CCCC
T ss_pred HHHHHHHHHHHHHH-hCCCC-CH-HH-HhcCCCc--EEEeCcHHhCCCcccCCCccEEEeCCcCCCCCC-------CCCC
Confidence 11112334444442 44431 10 00 0001111 222222222222 345567 8999975322110 0112
Q ss_pred HH--cCCCcEEEeeCCCCCCChHHHHHHHHHHHHHh-CCeEEEEcCCCC-CCCCCCCCCceEEcCCCChhhhcccccEEE
Q 013835 236 LE--AGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQT-GQRGIINKGWGG-LGNLAEPKDSIYLLDNIPHDWLFLQCKAVV 311 (435)
Q Consensus 236 ~~--~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-~~~~iv~~~~~~-~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I 311 (435)
.. .++++||+++||.. ....+.+..++++++.. +.++++.+|... .+.+.++++|+.+.+|+|+.++++++|+||
T Consensus 226 ~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~~~l~~ad~~v 304 (430)
T 2iyf_A 226 QRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQADLFV 304 (430)
T ss_dssp CCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEESSCCHHHHHTTCSEEE
T ss_pred ccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEecCCHHHHhhccCEEE
Confidence 22 23468999999987 44556777788888875 778887776543 334445678999999999999999999999
Q ss_pred EeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHhhc
Q 013835 312 HHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELAEAMEK 390 (435)
Q Consensus 312 ~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~ 390 (435)
+|||+||++||+++|+|+|++|..+||..|++.+++.|+|+ .++.++++.++|.++|.+++ |++++++++++++++.+
T Consensus 305 ~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~-~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 305 THAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVAR-KLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQ 383 (430)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEE-ECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEE-EcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999997 88877789999999999999 99999999999999988
Q ss_pred cCcHHHHHHHHHHhccccC
Q 013835 391 EDGVTGAVKAFFKHYSRSK 409 (435)
Q Consensus 391 ~~~~~~~~~~i~~~l~~~~ 409 (435)
.++++++++.+++++.+..
T Consensus 384 ~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 384 EGGTRRAADLIEAELPARH 402 (430)
T ss_dssp HCHHHHHHHHHHTTSCC--
T ss_pred cCcHHHHHHHHHHHhhccc
Confidence 8899999999999887653
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5.5e-38 Score=300.09 Aligned_cols=362 Identities=15% Similarity=0.190 Sum_probs=240.1
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEc-cccccCCCC----CCCC------CchhhHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPL-DMVKNKGFL----PSGP------SEIPVQR 69 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i-~~~~~~~~~----~~~~------~~~~~~~ 69 (435)
|++.++.||++|+.+||++|+++||+|++++.+...+.+...|++++.+ +........ .... .......
T Consensus 6 ~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (391)
T 3tsa_A 6 VVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQRDTEAGR 85 (391)
T ss_dssp EECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGGGCTTSHHHH
T ss_pred EEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhcccccccccccccchhHH
Confidence 4677899999999999999999999999999888888889999999998 421110000 0000 0001111
Q ss_pred HHHHHHHHHH---HhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCccc
Q 013835 70 NQMKEIIYSL---LPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGY 146 (435)
Q Consensus 70 ~~~~~~~~~~---~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~~~ 146 (435)
..+......+ +......+.+.+++++||+|++|...+++.++|+.+|||++.+........ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~---------------~ 150 (391)
T 3tsa_A 86 QLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTA---------------G 150 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTT---------------T
T ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccc---------------c
Confidence 1111111111 000123334556778999999998778788999999999988753221100 0
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCC
Q 013835 147 RLSYQIVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNY 226 (435)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~ 226 (435)
. . .......++.... .++++..... +. .....++.+..........+.+++.
T Consensus 151 ~-----~----~~~~~~~~~~~~~-~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~p~--------- 202 (391)
T 3tsa_A 151 P-----F----SDRAHELLDPVCR-HHGLTGLPTP--------EL-ILDPCPPSLQASDAPQGAPVQYVPY--------- 202 (391)
T ss_dssp H-----H----HHHHHHHHHHHHH-HTTSSSSCCC--------SE-EEECSCGGGSCTTSCCCEECCCCCC---------
T ss_pred c-----c----cchHHHHHHHHHH-HcCCCCCCCC--------ce-EEEecChhhcCCCCCccCCeeeecC---------
Confidence 0 0 0112222333333 2444322110 00 1111111111111001111222211
Q ss_pred CCchHHHHHHH--cCCCcEEEeeCCCCC--CChHHHHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCCCCceEEcCCCChh
Q 013835 227 EPPESLVKWLE--AGSKPIYIGFGSLPV--QEPEKMTQIIVEAFEQT-GQRGIINKGWGGLGNLAEPKDSIYLLDNIPHD 301 (435)
Q Consensus 227 ~~~~~l~~~~~--~~~~~v~v~~Gs~~~--~~~~~~~~~~~~~~~~~-~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~ 301 (435)
..+.....|+. .++++|++++||... ..+..+++.++++ ++. +.++++.+++...+.+...++|+++.+|+|+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~ 281 (391)
T 3tsa_A 203 NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLN 281 (391)
T ss_dssp CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGG
T ss_pred CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHH
Confidence 01111223443 234699999999832 2225677888888 777 77888887765545556678999999999999
Q ss_pred hhcccccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCC--CCCCHHHHHHHHHHhc-CHHHH
Q 013835 302 WLFLQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPV--DEFSLPKLINAINFML-DPKVK 378 (435)
Q Consensus 302 ~~l~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~--~~~~~~~l~~~i~~ll-~~~~~ 378 (435)
+++++||+||+|||.||++||+++|+|+|++|...||..|++.+++.|+|+ .++. ++.+.++|.+++.+++ |++++
T Consensus 282 ~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~-~~~~~~~~~~~~~l~~ai~~ll~~~~~~ 360 (391)
T 3tsa_A 282 LFLRTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGI-CLPDEQAQSDHEQFTDSIATVLGDTGFA 360 (391)
T ss_dssp GTGGGCSEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEE-ECCSHHHHTCHHHHHHHHHHHHTCTHHH
T ss_pred HHHhhCCEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEE-ecCcccccCCHHHHHHHHHHHHcCHHHH
Confidence 999999999999999999999999999999999999999999999999997 8877 6678999999999999 99999
Q ss_pred HHHHHHHHHhhccCcHHHHHHHHHHhccc
Q 013835 379 ERAVELAEAMEKEDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 407 (435)
++++++++++.+.++++++++.|+++++.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 389 (391)
T 3tsa_A 361 AAAIKLSDEITAMPHPAALVRTLENTAAI 389 (391)
T ss_dssp HHHHHHHHHHHTSCCHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999987753
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.8e-38 Score=304.01 Aligned_cols=351 Identities=19% Similarity=0.205 Sum_probs=236.9
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccCCCC--------C--------CCCCc
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNKGFL--------P--------SGPSE 64 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~--------~--------~~~~~ 64 (435)
|++.++.||++|+++||++|+++||+|+++++ .+.+.+...|++++.++...+.... . .....
T Consensus 25 ~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (398)
T 3oti_A 25 FVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPAID 103 (398)
T ss_dssp EECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHTGGGSCCCS
T ss_pred EEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCCccccccccCChhhh
Confidence 46778999999999999999999999999999 8888999999999998722110000 0 00011
Q ss_pred hhhHHHHHHHHHHHHHhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCc
Q 013835 65 IPVQRNQMKEIIYSLLPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPA 144 (435)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~ 144 (435)
.... ...+..........+.+.+++++||+||+|+..+++.++|+.+|||+|......... ..
T Consensus 104 ~~~~----~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~--------~~----- 166 (398)
T 3oti_A 104 LEEW----GVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT--------RG----- 166 (398)
T ss_dssp GGGG----HHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC--------TT-----
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc--------cc-----
Confidence 1111 111111222222333445667799999999888888899999999998765321100 00
Q ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCC
Q 013835 145 GYRLSYQIVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLAS 224 (435)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~ 224 (435)
. .. .....++.+.. .++++ ... .+ .....+++.+..........+.++..
T Consensus 167 -~-------~~----~~~~~l~~~~~-~~~~~-~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------- 216 (398)
T 3oti_A 167 -M-------HR----SIASFLTDLMD-KHQVS-LPE--------PV-ATIESFPPSLLLEAEPEGWFMRWVPY------- 216 (398)
T ss_dssp -H-------HH----HHHTTCHHHHH-HTTCC-CCC--------CS-EEECSSCGGGGTTSCCCSBCCCCCCC-------
T ss_pred -h-------hh----HHHHHHHHHHH-HcCCC-CCC--------CC-eEEEeCCHHHCCCCCCCCCCccccCC-------
Confidence 0 00 11111222222 24433 110 00 01111111111110000001112110
Q ss_pred CCCCchHHHHHHH--cCCCcEEEeeCCCCCC-ChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChh
Q 013835 225 NYEPPESLVKWLE--AGSKPIYIGFGSLPVQ-EPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHD 301 (435)
Q Consensus 225 ~~~~~~~l~~~~~--~~~~~v~v~~Gs~~~~-~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~ 301 (435)
..+....+|+. .++++|||++||.... ...+.+..+++++++.+.+++|++++.+.+.+...++|+++.+|+|+.
T Consensus 217 --~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~ 294 (398)
T 3oti_A 217 --GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLH 294 (398)
T ss_dssp --CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESSCCHH
T ss_pred --CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEccCCHH
Confidence 00111112322 2457999999998432 123456778899988899999998876655566788999999999999
Q ss_pred hhcccccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHH--HHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHH
Q 013835 302 WLFLQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWG--ERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVK 378 (435)
Q Consensus 302 ~~l~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na--~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~ 378 (435)
+++++||+||||||+||++||+++|+|+|++|...||..|+ +++++.|+|+ .++.++.+.+.|. +++ |++++
T Consensus 295 ~ll~~ad~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~-~~~~~~~~~~~l~----~ll~~~~~~ 369 (398)
T 3oti_A 295 TLLRTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGL-VSTSDKVDADLLR----RLIGDESLR 369 (398)
T ss_dssp HHHTTCSEEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEE-ECCGGGCCHHHHH----HHHHCHHHH
T ss_pred HHHhhCCEEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEE-eeCCCCCCHHHHH----HHHcCHHHH
Confidence 99999999999999999999999999999999999999999 9999999997 8887777777776 788 99999
Q ss_pred HHHHHHHHHhhccCcHHHHHHHHHHhcc
Q 013835 379 ERAVELAEAMEKEDGVTGAVKAFFKHYS 406 (435)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 406 (435)
++++++++++.+.++++++++.|+++++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 370 TAAREVREEMVALPTPAETVRRIVERIS 397 (398)
T ss_dssp HHHHHHHHHHHTSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999998764
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1.1e-35 Score=286.12 Aligned_cols=365 Identities=19% Similarity=0.223 Sum_probs=244.7
Q ss_pred CcccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEcccc--cc--------CCCCCCCCCchhhHHH
Q 013835 1 MLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMV--KN--------KGFLPSGPSEIPVQRN 70 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~--~~--------~~~~~~~~~~~~~~~~ 70 (435)
|++.++.||++|+++||++|+++||+|++++.+.+.+.+...|++++.++.. .. ................
T Consensus 25 ~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (412)
T 3otg_A 25 FASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSE 104 (412)
T ss_dssp EECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTCCHHHHTT
T ss_pred EEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhhcccCCccCChhHhhH
Confidence 4677899999999999999999999999999888888888999999998720 00 0000000000000000
Q ss_pred HHHHHHHHH-HhhccCCCccCCcccCcCEEEeCCcchhHHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCccchHH
Q 013835 71 QMKEIIYSL-LPACRDPDLDSGIAFKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLS 149 (435)
Q Consensus 71 ~~~~~~~~~-~~~~~~~~~~~~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 149 (435)
.+...+... .......+.+.+++++||+||+|...+++.++|+.+|||+|......... ...
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~----------------~~~- 167 (412)
T 3otg_A 105 LPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP----------------DDL- 167 (412)
T ss_dssp SHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC----------------SHH-
T ss_pred HHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc----------------hhh-
Confidence 111111111 11111222344566799999999777777899999999998864321100 000
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCC-CCCC---CCeeeecccccCCCC
Q 013835 150 YQIVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPK-DWGP---KVDVVGFCFLDLASN 225 (435)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~vG~~~~~~~~~ 225 (435)
...+...++.+.. .++++...... ....+. ....++... .... .+.. .+.++++
T Consensus 168 --------~~~~~~~~~~~~~-~~g~~~~~~~~---~~~~d~-~i~~~~~~~-~~~~~~~~~~~~~~~~~~~-------- 225 (412)
T 3otg_A 168 --------TRSIEEEVRGLAQ-RLGLDLPPGRI---DGFGNP-FIDIFPPSL-QEPEFRARPRRHELRPVPF-------- 225 (412)
T ss_dssp --------HHHHHHHHHHHHH-HTTCCCCSSCC---GGGGCC-EEECSCGGG-SCHHHHTCTTEEECCCCCC--------
T ss_pred --------hHHHHHHHHHHHH-HcCCCCCcccc---cCCCCe-EEeeCCHHh-cCCcccCCCCcceeeccCC--------
Confidence 0112223344443 25554322111 001111 111111111 1100 0000 0111111
Q ss_pred CCCchHHHHH--H-HcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCC-CCCCCCCCCceEEcCCCChh
Q 013835 226 YEPPESLVKW--L-EAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGG-LGNLAEPKDSIYLLDNIPHD 301 (435)
Q Consensus 226 ~~~~~~l~~~--~-~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~-~~~~~~~~~~v~~~~~~p~~ 301 (435)
.......+| . ..++++|++++|+.. ......+..+++++++.+.++++.+|+.. .+.+.++++|+.+.+|+|+.
T Consensus 226 -~~~~~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~ 303 (412)
T 3otg_A 226 -AEQGDLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQA 303 (412)
T ss_dssp -CCCCCCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHH
T ss_pred -CCCCCCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHH
Confidence 111112233 2 234579999999986 34456777788999888889998887665 45566678999999999999
Q ss_pred hhcccccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHH
Q 013835 302 WLFLQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKER 380 (435)
Q Consensus 302 ~~l~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~ 380 (435)
++++.||+||+|||+||++||+++|+|+|++|...||..|++.+++.|+|+ .++.++.++++|.++|.+++ |++++++
T Consensus 304 ~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~-~~~~~~~~~~~l~~ai~~ll~~~~~~~~ 382 (412)
T 3otg_A 304 ALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGD-HLLPDNISPDSVSGAAKRLLAEESYRAG 382 (412)
T ss_dssp HHGGGCSEEEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEE-ECCGGGCCHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHhcCcEEEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEE-ecCcccCCHHHHHHHHHHHHhCHHHHHH
Confidence 999999999999999999999999999999999999999999999999997 88877789999999999999 9999999
Q ss_pred HHHHHHHhhccCcHHHHHHHHHHhccc
Q 013835 381 AVELAEAMEKEDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~i~~~l~~ 407 (435)
+.+.++++.+.++++++++.+++++++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 383 ARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 999999999999999999999998864
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.4e-34 Score=269.24 Aligned_cols=333 Identities=17% Similarity=0.099 Sum_probs=214.9
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeCCCc--HHHHHhcCceeEEccccccCCCCCCCCCchhhHHHHHHHHHHHH
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNF--KDFVLTAGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKEIIYSL 79 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~--~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (435)
.+.||.||++|+++||++|+++||+|+|++..+. .+.+...|+++..++...-. .... ... ......+....
T Consensus 8 ~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~---~~~~--~~~-~~~~~~~~~~~ 81 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLR---GKGL--KSL-VKAPLELLKSL 81 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------------CHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcC---CCCH--HHH-HHHHHHHHHHH
Confidence 4567889999999999999999999999986543 35667889999988731110 0000 000 00011111111
Q ss_pred HhhccCCCccCCcccCcCEEEeC--CcchhHHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCccchHHHHHHHHHH
Q 013835 80 LPACRDPDLDSGIAFKADAIIAN--PPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLI 157 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~pDlVi~d--~~~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
... .+.+++++||+||++ +.+..+.++|+.+|||+++.-. .. +| .
T Consensus 82 ~~~-----~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~-n~-----~~----------G------------ 128 (365)
T 3s2u_A 82 FQA-----LRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ-NA-----VA----------G------------ 128 (365)
T ss_dssp HHH-----HHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-SS-----SC----------C------------
T ss_pred HHH-----HHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-ch-----hh----------h------------
Confidence 111 234667799999987 4445567899999999986321 00 00 0
Q ss_pred HHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCCCCchHHHHHHH
Q 013835 158 WLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWLE 237 (435)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~l~~~~~ 237 (435)
..+++..+ +. +. +...+.. ..+..++..++|........ .... ....++
T Consensus 129 ------~~nr~l~~-~a----~~------------v~~~~~~-----~~~~~~k~~~~g~pvr~~~~--~~~~-~~~~~~ 177 (365)
T 3s2u_A 129 ------TANRSLAP-IA----RR------------VCEAFPD-----TFPASDKRLTTGNPVRGELF--LDAH-ARAPLT 177 (365)
T ss_dssp ------HHHHHHGG-GC----SE------------EEESSTT-----SSCC---CEECCCCCCGGGC--CCTT-SSCCCT
T ss_pred ------hHHHhhcc-cc----ce------------eeecccc-----cccCcCcEEEECCCCchhhc--cchh-hhcccC
Confidence 01111111 10 00 0000110 11123456666753222111 0000 001122
Q ss_pred cCCCcEEEeeCCCCCCChHHHHHHHHHHHHHh----CCeEEEEcCCCCCCCC----CCCCCceEEcCCCChh-hhccccc
Q 013835 238 AGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQT----GQRGIINKGWGGLGNL----AEPKDSIYLLDNIPHD-WLFLQCK 308 (435)
Q Consensus 238 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~----~~~~iv~~~~~~~~~~----~~~~~~v~~~~~~p~~-~~l~~~~ 308 (435)
.+++.|+|..||..... +.+.+.+++... +..+++.+|..+.+.+ .+.+.++.+.+|+++. ++++.||
T Consensus 178 ~~~~~ilv~gGs~g~~~---~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD 254 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEP---LNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWAD 254 (365)
T ss_dssp TSCCEEEECCTTTTCSH---HHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCS
T ss_pred CCCcEEEEECCcCCccc---cchhhHHHHHhcccccceEEEEecCccccccccceecccccccccccchhhhhhhhccce
Confidence 34568899999986433 445566666554 3466766765442222 2356789999999875 5699999
Q ss_pred EEEEeCCchHHHHHHHhCCCEEeecCC----CChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHH
Q 013835 309 AVVHHGGAGTTAAGLRAACPTTIVPFF----GDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVE 383 (435)
Q Consensus 309 l~I~hgG~~s~~Eal~~G~P~l~~P~~----~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~ 383 (435)
++|+|+|.+|++|++++|+|+|++|.. .+|..||+.+++.|+|+ .++.+++++++|.++|.+++ |++.++++.+
T Consensus 255 lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~-~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~ 333 (365)
T 3s2u_A 255 LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGR-LLPQKSTGAAELAAQLSEVLMHPETLRSMAD 333 (365)
T ss_dssp EEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEE-ECCTTTCCHHHHHHHHHHHHHCTHHHHHHHH
T ss_pred EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEE-EeecCCCCHHHHHHHHHHHHCCHHHHHHHHH
Confidence 999999999999999999999999864 57999999999999997 89989999999999999999 9999999999
Q ss_pred HHHHhhccCcHHHHHHHHHHhcccc
Q 013835 384 LAEAMEKEDGVTGAVKAFFKHYSRS 408 (435)
Q Consensus 384 ~~~~~~~~~~~~~~~~~i~~~l~~~ 408 (435)
.++++...++++++++.++++.+..
T Consensus 334 ~a~~~~~~~aa~~ia~~i~~larG~ 358 (365)
T 3s2u_A 334 QARSLAKPEATRTVVDACLEVARGL 358 (365)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHC---
T ss_pred HHHhcCCccHHHHHHHHHHHHHccc
Confidence 9999988899999999999887543
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.3e-27 Score=198.87 Aligned_cols=159 Identities=22% Similarity=0.335 Sum_probs=137.0
Q ss_pred CCchHHHHHHHcC--CCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhc
Q 013835 227 EPPESLVKWLEAG--SKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLF 304 (435)
Q Consensus 227 ~~~~~l~~~~~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l 304 (435)
.+|+++.+|++.. +++|||++||.....+.+.+..+++++++.+.+++|.+++... ..+++|+++.+|+|+.+++
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~---~~~~~~v~~~~~~~~~~~l 82 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP---DTLGLNTRLYKWIPQNDLL 82 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC---TTCCTTEEEESSCCHHHHH
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc---ccCCCcEEEecCCCHHHHh
Confidence 5688899999753 3699999999864445667788999998888899988865432 2357899999999998887
Q ss_pred --ccccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHH
Q 013835 305 --LQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERA 381 (435)
Q Consensus 305 --~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~ 381 (435)
++||+||||||+||++||+++|+|+|++|...||..||+++++.|+|+ .++.++++.++|.++|.+++ |+++++++
T Consensus 83 ~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~-~~~~~~~~~~~l~~~i~~ll~~~~~~~~a 161 (170)
T 2o6l_A 83 GHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAV-RVDFNTMSSTDLLNALKRVINDPSYKENV 161 (170)
T ss_dssp TSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEE-ECCTTTCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred cCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeE-EeccccCCHHHHHHHHHHHHcCHHHHHHH
Confidence 999999999999999999999999999999999999999999999997 88888889999999999999 99999999
Q ss_pred HHHHHHhh
Q 013835 382 VELAEAME 389 (435)
Q Consensus 382 ~~~~~~~~ 389 (435)
+++++.++
T Consensus 162 ~~~~~~~~ 169 (170)
T 2o6l_A 162 MKLSRIQH 169 (170)
T ss_dssp HHHC----
T ss_pred HHHHHHhh
Confidence 99888765
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.90 E-value=2.5e-22 Score=189.54 Aligned_cols=334 Identities=17% Similarity=0.103 Sum_probs=208.2
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeCCCc--HHHHHhcCceeEEccccccCCCCCCCCCchhhHHHHHHHHHHHH
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNF--KDFVLTAGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKEIIYSL 79 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~--~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (435)
++.+..||..++..||++|.++||+|++++.... ...+...|++++.++.... . ....... ...........
T Consensus 12 ~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~---~--~~~~~~~-~~~~~~~~~~~ 85 (364)
T 1f0k_A 12 MAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGL---R--GKGIKAL-IAAPLRIFNAW 85 (364)
T ss_dssp ECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCC---T--TCCHHHH-HTCHHHHHHHH
T ss_pred EeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCcc---C--cCccHHH-HHHHHHHHHHH
Confidence 4456679999999999999999999999987543 2344556898888762110 0 0000100 00000000000
Q ss_pred HhhccCCCccCCcccCcCEEEeCCc--chhHHHHHHHcCCCEEEeeccCCCCCCCCCCCCcccCCCccchHHHHHHHHHH
Q 013835 80 LPACRDPDLDSGIAFKADAIIANPP--AYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLI 157 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~pDlVi~d~~--~~~~~~~A~~~~iP~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
..+.+.+++.+||+|+++.. ...+..+++..|+|+|......+ + ..
T Consensus 86 -----~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------~-----------~~---------- 133 (364)
T 1f0k_A 86 -----RQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------A-----------GL---------- 133 (364)
T ss_dssp -----HHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------C-----------CH----------
T ss_pred -----HHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------C-----------cH----------
Confidence 00122345569999999743 33456788899999986432110 0 00
Q ss_pred HHHHhHHHHHHHHhccCCCCCCCCCCCCCCCCCCCeeEeeCCCCcCCCCCCCCCCeeeecccccCCCCCCCchHHHHH-H
Q 013835 158 WLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPHGYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKW-L 236 (435)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~l~~~-~ 236 (435)
.+++..+ ..+. ....++.. ++ ++.++|....... ...+.....+ +
T Consensus 134 -------~~~~~~~-----~~d~-------------v~~~~~~~------~~-~~~~i~n~v~~~~--~~~~~~~~~~~~ 179 (364)
T 1f0k_A 134 -------TNKWLAK-----IATK-------------VMQAFPGA------FP-NAEVVGNPVRTDV--LALPLPQQRLAG 179 (364)
T ss_dssp -------HHHHHTT-----TCSE-------------EEESSTTS------SS-SCEECCCCCCHHH--HTSCCHHHHHTT
T ss_pred -------HHHHHHH-----hCCE-------------EEecChhh------cC-CceEeCCccchhh--cccchhhhhccc
Confidence 0111110 0000 01011111 11 3455553211000 0011111122 1
Q ss_pred HcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHh--CCeEEEEcCCCCCCCCC----CC-CCceEEcCCCC-hhhhccccc
Q 013835 237 EAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQT--GQRGIINKGWGGLGNLA----EP-KDSIYLLDNIP-HDWLFLQCK 308 (435)
Q Consensus 237 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~--~~~~iv~~~~~~~~~~~----~~-~~~v~~~~~~p-~~~~l~~~~ 308 (435)
..+++++++..|+... .+..+.++++++.. +.++++..|..+.+.+. +. .++|.+.+|++ ..++++.||
T Consensus 180 ~~~~~~il~~~g~~~~---~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 256 (364)
T 1f0k_A 180 REGPVRVLVVGGSQGA---RILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD 256 (364)
T ss_dssp CCSSEEEEEECTTTCC---HHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS
T ss_pred CCCCcEEEEEcCchHh---HHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHHHhCC
Confidence 2233467777788753 34455566777665 46666666654422221 12 25899999993 355699999
Q ss_pred EEEEeCCchHHHHHHHhCCCEEeecCC---CChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHH
Q 013835 309 AVVHHGGAGTTAAGLRAACPTTIVPFF---GDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKVKERAVELA 385 (435)
Q Consensus 309 l~I~hgG~~s~~Eal~~G~P~l~~P~~---~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 385 (435)
++|+++|.+++.||+++|+|+|+.+.. .||..|++.+.+.|.|+ .++..+.+.++++++|.++ |++.++++.+.+
T Consensus 257 ~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~-~~~~~d~~~~~la~~i~~l-~~~~~~~~~~~~ 334 (364)
T 1f0k_A 257 VVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAK-IIEQPQLSVDAVANTLAGW-SRETLLTMAERA 334 (364)
T ss_dssp EEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEE-ECCGGGCCHHHHHHHHHTC-CHHHHHHHHHHH
T ss_pred EEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEE-EeccccCCHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 999999999999999999999999987 68999999999999997 8887767799999999999 999999999998
Q ss_pred HHhhccCcHHHHHHHHHHhccccCCCC
Q 013835 386 EAMEKEDGVTGAVKAFFKHYSRSKTQP 412 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~l~~~~~~~ 412 (435)
++.....+++++++.++++++....++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 335 RAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp HHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred HHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 888877899999999999998776553
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.75 E-value=3.3e-17 Score=146.45 Aligned_cols=110 Identities=11% Similarity=0.097 Sum_probs=84.5
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCC--CCCC---CCCCceEEcCCCChhh-hcccccEEEEeC
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGL--GNLA---EPKDSIYLLDNIPHDW-LFLQCKAVVHHG 314 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~--~~~~---~~~~~v~~~~~~p~~~-~l~~~~l~I~hg 314 (435)
+.|+|++|+..... +...+++++.... ++.++.|.... +.+. +...|+.+.+|++... +++.||++|++|
T Consensus 158 ~~ILv~~GG~d~~~---l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~g 233 (282)
T 3hbm_A 158 YDFFICMGGTDIKN---LSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISA 233 (282)
T ss_dssp EEEEEECCSCCTTC---HHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEES
T ss_pred CeEEEEECCCchhh---HHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEECC
Confidence 48999999764333 5566777776544 56666655432 1111 1224899999997764 599999999999
Q ss_pred CchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCC
Q 013835 315 GAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIP 356 (435)
Q Consensus 315 G~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~ 356 (435)
| +|++|++++|+|+|++|...+|..||+.+++.|+++ .+.
T Consensus 234 G-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~-~~~ 273 (282)
T 3hbm_A 234 S-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEV-EYK 273 (282)
T ss_dssp S-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEE-ECG
T ss_pred c-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEE-Ecc
Confidence 9 799999999999999999999999999999999996 554
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.67 E-value=1.4e-16 Score=136.51 Aligned_cols=126 Identities=15% Similarity=0.104 Sum_probs=94.5
Q ss_pred CCCcEEEeeCCCCCCChHHHHHHH-----HHHHHHhC-CeEEEEcCCCCCCCCCC-------------CC----------
Q 013835 239 GSKPIYIGFGSLPVQEPEKMTQII-----VEAFEQTG-QRGIINKGWGGLGNLAE-------------PK---------- 289 (435)
Q Consensus 239 ~~~~v~v~~Gs~~~~~~~~~~~~~-----~~~~~~~~-~~~iv~~~~~~~~~~~~-------------~~---------- 289 (435)
+++.|||+.||... ..+++..+ ++++.+.+ .++++.+|....+...+ +|
T Consensus 27 ~~~~VlVtgGS~~~--~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 27 EEKALFVTCGATVP--FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CSCCEEEECCSCCS--CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCEEEEEcCCchH--HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 45799999999732 23344434 37777666 78888888664311110 11
Q ss_pred ---------CceEEcCCCChh-hhcc-cccEEEEeCCchHHHHHHHhCCCEEeecCC----CChhhHHHHHHHcCCCCCC
Q 013835 290 ---------DSIYLLDNIPHD-WLFL-QCKAVVHHGGAGTTAAGLRAACPTTIVPFF----GDQPFWGERVHARGVGPPP 354 (435)
Q Consensus 290 ---------~~v~~~~~~p~~-~~l~-~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~----~dQ~~na~~v~~~g~G~~~ 354 (435)
-++.+.+|+++. ++++ .||++|||||+||++|++++|+|+|++|.. .||..||+++++.|+|+ .
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~-~ 183 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVW-S 183 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCC-E
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEE-E
Confidence 256778888775 5699 999999999999999999999999999974 36999999999999996 5
Q ss_pred CCCCCCCHHHHHHHHHHh
Q 013835 355 IPVDEFSLPKLINAINFM 372 (435)
Q Consensus 355 l~~~~~~~~~l~~~i~~l 372 (435)
+ ++++|.++|.++
T Consensus 184 ~-----~~~~L~~~i~~l 196 (224)
T 2jzc_A 184 C-----APTETGLIAGLR 196 (224)
T ss_dssp E-----CSCTTTHHHHHH
T ss_pred c-----CHHHHHHHHHHH
Confidence 5 456677777665
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.53 E-value=1.2e-13 Score=130.53 Aligned_cols=155 Identities=10% Similarity=0.057 Sum_probs=106.5
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh-----CCeEEEEcCCCC--CCCCC---CCCCceEEcCCCChhh---hccc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT-----GQRGIINKGWGG--LGNLA---EPKDSIYLLDNIPHDW---LFLQ 306 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-----~~~~iv~~~~~~--~~~~~---~~~~~v~~~~~~p~~~---~l~~ 306 (435)
++.|+++.|+..... -++.++++++.. +.++++..|... .+.+. ...++|.+.++++..+ +++.
T Consensus 198 ~~~vl~~~gr~~~~k---~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ 274 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP---LLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRA 274 (376)
T ss_dssp SCEEEECCCCGGGGG---GHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHT
T ss_pred CCEEEEEeCcccchH---HHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHh
Confidence 456777777653221 123355555432 456666555332 11111 1235899997776654 4999
Q ss_pred ccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHH
Q 013835 307 CKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELA 385 (435)
Q Consensus 307 ~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~ 385 (435)
||+||+++| |.+.||+++|+|+|+.+..+++.. +.+.|.|+ .++ .++++|++++.+++ |++.++++.+.+
T Consensus 275 ad~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~-lv~---~d~~~la~~i~~ll~d~~~~~~~~~~~ 345 (376)
T 1v4v_A 275 SLLLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILK-LAG---TDPEGVYRVVKGLLENPEELSRMRKAK 345 (376)
T ss_dssp EEEEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEE-ECC---SCHHHHHHHHHHHHTCHHHHHHHHHSC
T ss_pred CcEEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceE-ECC---CCHHHHHHHHHHHHhChHhhhhhcccC
Confidence 999999984 457799999999999876666544 34567886 564 27899999999999 998888887655
Q ss_pred HHhhccCcHHHHHHHHHHhcc
Q 013835 386 EAMEKEDGVTGAVKAFFKHYS 406 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~l~ 406 (435)
+.+...+.++++++.+++++.
T Consensus 346 ~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 346 NPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp CSSCCSCHHHHHHHHHHHHTT
T ss_pred CCCCCChHHHHHHHHHHHHhc
Confidence 555455678899999998875
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.53 E-value=1.2e-12 Score=126.37 Aligned_cols=159 Identities=16% Similarity=0.106 Sum_probs=102.1
Q ss_pred CCcEEEeeCCCCCC-ChHHHHHHHHHHHHHh---CCeEEEEcC----CCCCCCCC------CCCCceEEcCCCChhhh--
Q 013835 240 SKPIYIGFGSLPVQ-EPEKMTQIIVEAFEQT---GQRGIINKG----WGGLGNLA------EPKDSIYLLDNIPHDWL-- 303 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~-~~~~~~~~~~~~~~~~---~~~~iv~~~----~~~~~~~~------~~~~~v~~~~~~p~~~~-- 303 (435)
++.+++..|++... ..+.+++.+....+.. +.++++++. +...+.+. .+.++|.+.++++..++
T Consensus 242 ~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 321 (438)
T 3c48_A 242 HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVA 321 (438)
T ss_dssp SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHH
T ss_pred CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHH
Confidence 45677888887532 2333333322222221 356666654 11111111 24579999999998776
Q ss_pred -cccccEEEEeC----CchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHH
Q 013835 304 -FLQCKAVVHHG----GAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKV 377 (435)
Q Consensus 304 -l~~~~l~I~hg----G~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~ 377 (435)
++.+|++|... ..+++.||+++|+|+|+.+. ......+++.+.|+ .++.. +.++++++|.+++ |++.
T Consensus 322 ~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~-~~~~~--d~~~la~~i~~l~~~~~~ 394 (438)
T 3c48_A 322 VYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEGETGL-LVDGH--SPHAWADALATLLDDDET 394 (438)
T ss_dssp HHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBTTTEE-EESSC--CHHHHHHHHHHHHHCHHH
T ss_pred HHHhCCEEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCCCcEE-ECCCC--CHHHHHHHHHHHHcCHHH
Confidence 89999999765 24689999999999997653 45667777777886 66544 7899999999999 9887
Q ss_pred HHHHHHHHHHhhccCcHHHHHHHHHHhc
Q 013835 378 KERAVELAEAMEKEDGVTGAVKAFFKHY 405 (435)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l 405 (435)
++++.+.+++....-.++..++.+++++
T Consensus 395 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 422 (438)
T 3c48_A 395 RIRMGEDAVEHARTFSWAATAAQLSSLY 422 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 7776655555443344444444444443
No 27
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.52 E-value=1.1e-13 Score=131.30 Aligned_cols=152 Identities=12% Similarity=0.102 Sum_probs=102.9
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh-----CCeEEEEcCCCC--CCCCC---CCCCceEEcCCCChhhh---ccc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT-----GQRGIINKGWGG--LGNLA---EPKDSIYLLDNIPHDWL---FLQ 306 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-----~~~~iv~~~~~~--~~~~~---~~~~~v~~~~~~p~~~~---l~~ 306 (435)
++.|+++.+...+... . ++.++++++.. +.++++..+.++ .+.+. ...+++.+.+++++.++ ++.
T Consensus 230 ~~~vlv~~hR~~~~~~-~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ 307 (396)
T 3dzc_A 230 KKLILVTGHRRESFGG-G-FERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDR 307 (396)
T ss_dssp SEEEEEECSCBCCCTT-H-HHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHH
T ss_pred CCEEEEEECCcccchh-H-HHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHh
Confidence 4566676643222211 1 34456665543 456666555332 11111 23468999998875544 899
Q ss_pred ccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHH
Q 013835 307 CKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELA 385 (435)
Q Consensus 307 ~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~ 385 (435)
||++|+.+| |...||+++|+|+|+....+++. . +.+.|.++ .+.. +.++|.+++.+++ |++.++++.+..
T Consensus 308 ad~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~---e-~v~~G~~~-lv~~---d~~~l~~ai~~ll~d~~~~~~m~~~~ 378 (396)
T 3dzc_A 308 AHIILTDSG-GIQEEAPSLGKPVLVMRETTERP---E-AVAAGTVK-LVGT---NQQQICDALSLLLTDPQAYQAMSQAH 378 (396)
T ss_dssp CSEEEESCS-GGGTTGGGGTCCEEECCSSCSCH---H-HHHHTSEE-ECTT---CHHHHHHHHHHHHHCHHHHHHHHTSC
T ss_pred cCEEEECCc-cHHHHHHHcCCCEEEccCCCcch---H-HHHcCceE-EcCC---CHHHHHHHHHHHHcCHHHHHHHhhcc
Confidence 999999998 66689999999999986555543 2 34567775 5542 6899999999999 999999888776
Q ss_pred HHhhccCcHHHHHHHHH
Q 013835 386 EAMEKEDGVTGAVKAFF 402 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~i~ 402 (435)
+.+.+.++++++++.|+
T Consensus 379 ~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 379 NPYGDGKACQRIADILA 395 (396)
T ss_dssp CTTCCSCHHHHHHHHHH
T ss_pred CCCcCChHHHHHHHHHh
Confidence 66666677788888775
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.52 E-value=4.8e-13 Score=127.08 Aligned_cols=159 Identities=12% Similarity=0.043 Sum_probs=110.3
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh-----CCeEEEEcCCCCCCCC----CCCCCceEEcCCCChhhh---cccc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT-----GQRGIINKGWGGLGNL----AEPKDSIYLLDNIPHDWL---FLQC 307 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-----~~~~iv~~~~~~~~~~----~~~~~~v~~~~~~p~~~~---l~~~ 307 (435)
++.+++..|++.... -++.++++++.. +.++++++.+...+.+ ..+.++|.+.+++|.+++ +..+
T Consensus 197 ~~~~i~~~G~~~~~K---g~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 273 (394)
T 3okp_A 197 TTPVIACNSRLVPRK---GQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAA 273 (394)
T ss_dssp TCCEEEEESCSCGGG---CHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHC
T ss_pred CceEEEEEecccccc---CHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhC
Confidence 347888889874322 223344444332 5677776543322222 124579999999998887 8999
Q ss_pred cEEEE-----------eCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CH
Q 013835 308 KAVVH-----------HGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DP 375 (435)
Q Consensus 308 ~l~I~-----------hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~ 375 (435)
|++|. -|..+++.||+++|+|+|+.+..+ ....+.+. .|+ .++.. +.++++++|.+++ |+
T Consensus 274 d~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i~~~-~g~-~~~~~--d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 274 DIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETVTPA-TGL-VVEGS--DVDKLSELLIELLDDP 345 (394)
T ss_dssp SEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGCCTT-TEE-ECCTT--CHHHHHHHHHHHHTCH
T ss_pred CEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHHhcC-Cce-EeCCC--CHHHHHHHHHHHHhCH
Confidence 99997 555689999999999999866432 33444444 775 55544 6899999999999 99
Q ss_pred HHHHHHHHHHHHhhcc-CcHHHHHHHHHHhccccC
Q 013835 376 KVKERAVELAEAMEKE-DGVTGAVKAFFKHYSRSK 409 (435)
Q Consensus 376 ~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~~ 409 (435)
+.++++.+.+++.... -.++..++.+.++++...
T Consensus 346 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 346 IRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 8888877776665543 578888887777776554
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.51 E-value=2.2e-13 Score=129.09 Aligned_cols=161 Identities=8% Similarity=0.042 Sum_probs=110.1
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh-----CCeEEEEcCCCC--CCCCC---CCCCceEEcCCCChhhh---ccc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT-----GQRGIINKGWGG--LGNLA---EPKDSIYLLDNIPHDWL---FLQ 306 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-----~~~~iv~~~~~~--~~~~~---~~~~~v~~~~~~p~~~~---l~~ 306 (435)
++.++++.|+..... +-++.+++++... +.++++..|... .+.+. ...++|.+.++++..++ ++.
T Consensus 205 ~~~vl~~~gr~~~~~--kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ 282 (384)
T 1vgv_A 205 KKMILVTGHRRESFG--RGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNH 282 (384)
T ss_dssp SEEEEEECCCBSSCC--HHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHH
T ss_pred CCEEEEEeCCccccc--hHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHh
Confidence 346788888765331 1233445555432 456666544321 11111 12368999888876555 899
Q ss_pred ccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHH
Q 013835 307 CKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELA 385 (435)
Q Consensus 307 ~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~ 385 (435)
||++|+.+|. ++.||+++|+|+|+.+..++.. .+.+.|.|+ .++. +.++++++|.+++ |++.++++.+.+
T Consensus 283 ad~~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~g~g~-lv~~---d~~~la~~i~~ll~d~~~~~~~~~~~ 353 (384)
T 1vgv_A 283 AWLILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTAGTVR-LVGT---DKQRIVEEVTRLLKDENEYQAMSRAH 353 (384)
T ss_dssp CSEEEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHHTSEE-EECS---SHHHHHHHHHHHHHCHHHHHHHHSSC
T ss_pred CcEEEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhCCceE-EeCC---CHHHHHHHHHHHHhChHHHhhhhhcc
Confidence 9999999865 5899999999999998644332 234457886 6643 7899999999999 998888887766
Q ss_pred HHhhccCcHHHHHHHHHHhccccCCC
Q 013835 386 EAMEKEDGVTGAVKAFFKHYSRSKTQ 411 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~l~~~~~~ 411 (435)
+++.....++++++.++++++....+
T Consensus 354 ~~~~~~~~~~~i~~~~~~~~~~~~~~ 379 (384)
T 1vgv_A 354 NPYGDGQACSRILEALKNNRISLGSH 379 (384)
T ss_dssp CTTCCSCHHHHHHHHHHHTCCCC---
T ss_pred CCCcCCCHHHHHHHHHHHHHHhhccc
Confidence 66665678899999999988765543
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.49 E-value=3e-14 Score=135.35 Aligned_cols=158 Identities=11% Similarity=0.065 Sum_probs=107.9
Q ss_pred CCCcEEEeeCCCCCCChHHHHHHHHHHHHHh-----CCeEEEEcCCCC--CCCCC---CCCCceEEcCCCChhhh---cc
Q 013835 239 GSKPIYIGFGSLPVQEPEKMTQIIVEAFEQT-----GQRGIINKGWGG--LGNLA---EPKDSIYLLDNIPHDWL---FL 305 (435)
Q Consensus 239 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-----~~~~iv~~~~~~--~~~~~---~~~~~v~~~~~~p~~~~---l~ 305 (435)
+++.++++.|...... +.++.++++++.. +.++++..+++. .+.+. ...+++.+.+++++.++ ++
T Consensus 223 ~~~~vlv~~~r~~~~~--~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~ 300 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG--EPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLR 300 (403)
T ss_dssp TCEEEEECCCCHHHHT--THHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred CCCEEEEEeCcccccC--cHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHH
Confidence 3456777766432111 1123344444432 456666655432 11111 13368999999976554 89
Q ss_pred cccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHH
Q 013835 306 QCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVEL 384 (435)
Q Consensus 306 ~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~ 384 (435)
.||++|+.+|..+ .||+++|+|+|+++..+++.. +.+.|.|+ .+.. +.++|.+++.+++ |++.++++.+.
T Consensus 301 ~ad~vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~-lv~~---d~~~l~~ai~~ll~~~~~~~~m~~~ 371 (403)
T 3ot5_A 301 KSYLVFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEAGTLK-LIGT---NKENLIKEALDLLDNKESHDKMAQA 371 (403)
T ss_dssp HEEEEEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHHTSEE-ECCS---CHHHHHHHHHHHHHCHHHHHHHHHS
T ss_pred hcCEEEECCccHH-HHHHHhCCCEEEecCCCcchh----heeCCcEE-EcCC---CHHHHHHHHHHHHcCHHHHHHHHhh
Confidence 9999999986433 799999999999976666543 24678775 5542 7899999999999 99999888776
Q ss_pred HHHhhccCcHHHHHHHHHHhccc
Q 013835 385 AEAMEKEDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 385 ~~~~~~~~~~~~~~~~i~~~l~~ 407 (435)
.+.+.+.+.++++++.|.+.+..
T Consensus 372 ~~~~g~~~aa~rI~~~l~~~l~~ 394 (403)
T 3ot5_A 372 ANPYGDGFAANRILAAIKSHFEE 394 (403)
T ss_dssp CCTTCCSCHHHHHHHHHHHHHTC
T ss_pred cCcccCCcHHHHHHHHHHHHhCC
Confidence 66666667889999999988753
No 31
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.46 E-value=6.7e-13 Score=124.96 Aligned_cols=158 Identities=11% Similarity=0.048 Sum_probs=106.2
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh----CCeEEEEcCCCCCC---CC---CCCCCceEEcCCCChhhh---ccc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT----GQRGIINKGWGGLG---NL---AEPKDSIYLLDNIPHDWL---FLQ 306 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~----~~~~iv~~~~~~~~---~~---~~~~~~v~~~~~~p~~~~---l~~ 306 (435)
++.++++.|+.......+.++.+++++... +..+++..++...+ .. ....+++.+.+.+++.++ ++.
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ 282 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMN 282 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHh
Confidence 467888888754333223445566666543 56677655432111 11 112368999888776544 999
Q ss_pred ccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHH
Q 013835 307 CKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELA 385 (435)
Q Consensus 307 ~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~ 385 (435)
||++|+.+|. ...||.++|+|+|.++...+..+ ..+.|.++ .+. .+.++|.+++.+++ |+..++++.+..
T Consensus 283 adlvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~-lv~---~d~~~i~~ai~~ll~d~~~~~~m~~~~ 353 (385)
T 4hwg_A 283 AFCILSDSGT-ITEEASILNLPALNIREAHERPE----GMDAGTLI-MSG---FKAERVLQAVKTITEEHDNNKRTQGLV 353 (385)
T ss_dssp CSEEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCE-ECC---SSHHHHHHHHHHHHTTCBTTBCCSCCC
T ss_pred CcEEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhcCceE-EcC---CCHHHHHHHHHHHHhChHHHHHhhccC
Confidence 9999999987 46999999999999987665322 24567775 453 26899999999999 876665554444
Q ss_pred HHh-hccCcHHHHHHHHHHhcc
Q 013835 386 EAM-EKEDGVTGAVKAFFKHYS 406 (435)
Q Consensus 386 ~~~-~~~~~~~~~~~~i~~~l~ 406 (435)
+.+ .+.+.++++++.|.+.+.
T Consensus 354 ~~~~g~g~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 354 PDYNEAGLVSKKILRIVLSYVD 375 (385)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHHHhh
Confidence 556 677788999999988764
No 32
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.45 E-value=8e-13 Score=125.71 Aligned_cols=159 Identities=13% Similarity=0.099 Sum_probs=104.2
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHH----hCCeEEEEcCCCCCCCCC------CCCCceEEcCCCCh-hhhccccc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQ----TGQRGIINKGWGGLGNLA------EPKDSIYLLDNIPH-DWLFLQCK 308 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~----~~~~~iv~~~~~~~~~~~------~~~~~v~~~~~~p~-~~~l~~~~ 308 (435)
++.+++..|++.... -++.++++++. .+.++++++.+...+.+. .+.++|.+.++... ..++..+|
T Consensus 210 ~~~~i~~~G~~~~~K---g~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~ad 286 (394)
T 2jjm_A 210 SEKILIHISNFRKVK---RVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSD 286 (394)
T ss_dssp --CEEEEECCCCGGG---THHHHHHHHHHHHHSSCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCS
T ss_pred CCeEEEEeecccccc---CHHHHHHHHHHHHhhCCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCC
Confidence 346777888875322 23334444443 256777665333211111 13578988887432 33499999
Q ss_pred EEE----EeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHH
Q 013835 309 AVV----HHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVE 383 (435)
Q Consensus 309 l~I----~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~ 383 (435)
++| .-|..+++.||+++|+|+|+.+..+ ....+++.+.|+ .++.. +.++++++|.+++ |++.++++.+
T Consensus 287 v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~-~~~~~--d~~~la~~i~~l~~~~~~~~~~~~ 359 (394)
T 2jjm_A 287 LMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGY-LCEVG--DTTGVADQAIQLLKDEELHRNMGE 359 (394)
T ss_dssp EEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEE-EECTT--CHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceE-EeCCC--CHHHHHHHHHHHHcCHHHHHHHHH
Confidence 999 4455689999999999999876542 334455556775 56544 7899999999999 9988887777
Q ss_pred HHHHhh-ccCcHHHHHHHHHHhcccc
Q 013835 384 LAEAME-KEDGVTGAVKAFFKHYSRS 408 (435)
Q Consensus 384 ~~~~~~-~~~~~~~~~~~i~~~l~~~ 408 (435)
.+++.. +.-+++..++.++++++.-
T Consensus 360 ~~~~~~~~~~s~~~~~~~~~~~~~~~ 385 (394)
T 2jjm_A 360 RARESVYEQFRSEKIVSQYETIYYDV 385 (394)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 666655 5567777777777766543
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.44 E-value=7.1e-12 Score=123.05 Aligned_cols=111 Identities=5% Similarity=0.015 Sum_probs=83.9
Q ss_pred CCCceEEcCCCChhhh---cccc----cEEEEeC---C-chHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCC
Q 013835 288 PKDSIYLLDNIPHDWL---FLQC----KAVVHHG---G-AGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIP 356 (435)
Q Consensus 288 ~~~~v~~~~~~p~~~~---l~~~----~l~I~hg---G-~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~ 356 (435)
+.++|.+.+++|..++ ++++ |++|.-. | .+++.||+++|+|+|+.. .......+...+.|+ .++
T Consensus 333 l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~~~g~-l~~ 407 (499)
T 2r60_A 333 CRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGGKYGV-LVD 407 (499)
T ss_dssp CBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGGTSSE-EEC
T ss_pred CCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCCceEE-EeC
Confidence 4578999999988877 8999 9999654 2 368999999999999765 345677777777886 665
Q ss_pred CCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHhhcc-CcHHHHHHHHHHhc
Q 013835 357 VDEFSLPKLINAINFML-DPKVKERAVELAEAMEKE-DGVTGAVKAFFKHY 405 (435)
Q Consensus 357 ~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l 405 (435)
.. +.++++++|.+++ |++.++++.+.+++.... -+++..++.+++++
T Consensus 408 ~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y 456 (499)
T 2r60_A 408 PE--DPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVI 456 (499)
T ss_dssp TT--CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 54 7899999999999 998887776666554443 45555555554444
No 34
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.43 E-value=1.4e-11 Score=117.48 Aligned_cols=155 Identities=10% Similarity=0.074 Sum_probs=109.9
Q ss_pred CcEEEeeCCC-CCCChHHHHHHHHHHHHHh-----CCeEEEEcCCCCCCCCC----CCCCceEEcCCCChhhh---cccc
Q 013835 241 KPIYIGFGSL-PVQEPEKMTQIIVEAFEQT-----GQRGIINKGWGGLGNLA----EPKDSIYLLDNIPHDWL---FLQC 307 (435)
Q Consensus 241 ~~v~v~~Gs~-~~~~~~~~~~~~~~~~~~~-----~~~~iv~~~~~~~~~~~----~~~~~v~~~~~~p~~~~---l~~~ 307 (435)
+.+++..|++ .... -++.+++++... +.++++++.+.. +.+. ++.++|.+.++++..++ +..+
T Consensus 208 ~~~i~~~G~~~~~~K---g~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 283 (406)
T 2gek_A 208 GRTVLFLGRYDEPRK---GMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSA 283 (406)
T ss_dssp SCEEEEESCTTSGGG---CHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHS
T ss_pred CeEEEEEeeeCcccc---CHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHC
Confidence 3677888887 4322 233355555543 567776654333 2221 22579999999998765 8999
Q ss_pred cEEEEeCC-----chHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHH
Q 013835 308 KAVVHHGG-----AGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERA 381 (435)
Q Consensus 308 ~l~I~hgG-----~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~ 381 (435)
|++|.... .+++.||+++|+|+|+.+ .......+++.+.|+ .++.. +.+++.++|.+++ |++.+.++
T Consensus 284 dv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i~~~~~g~-~~~~~--d~~~l~~~i~~l~~~~~~~~~~ 356 (406)
T 2gek_A 284 DVYCAPHLGGESFGIVLVEAMAAGTAVVASD----LDAFRRVLADGDAGR-LVPVD--DADGMAAALIGILEDDQLRAGY 356 (406)
T ss_dssp SEEEECCCSCCSSCHHHHHHHHHTCEEEECC----CHHHHHHHTTTTSSE-ECCTT--CHHHHHHHHHHHHHCHHHHHHH
T ss_pred CEEEecCCCCCCCchHHHHHHHcCCCEEEec----CCcHHHHhcCCCceE-EeCCC--CHHHHHHHHHHHHcCHHHHHHH
Confidence 99997643 469999999999999654 456777888778886 66544 7899999999999 99888887
Q ss_pred HHHHHHhhccCcHHHHHHHHHHhcc
Q 013835 382 VELAEAMEKEDGVTGAVKAFFKHYS 406 (435)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~i~~~l~ 406 (435)
.+.+++....-+++..++.+++++.
T Consensus 357 ~~~~~~~~~~~s~~~~~~~~~~~~~ 381 (406)
T 2gek_A 357 VARASERVHRYDWSVVSAQIMRVYE 381 (406)
T ss_dssp HHHHHHHGGGGBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 7777766665567666666665554
No 35
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.42 E-value=2.2e-12 Score=124.23 Aligned_cols=160 Identities=12% Similarity=0.039 Sum_probs=108.4
Q ss_pred CcEEEeeCCCC-CC-ChHHHHHHHHHHHHH----hCCeEEEEcCCCCC--CCCC----CCCCceEEcCCCChhhh---cc
Q 013835 241 KPIYIGFGSLP-VQ-EPEKMTQIIVEAFEQ----TGQRGIINKGWGGL--GNLA----EPKDSIYLLDNIPHDWL---FL 305 (435)
Q Consensus 241 ~~v~v~~Gs~~-~~-~~~~~~~~~~~~~~~----~~~~~iv~~~~~~~--~~~~----~~~~~v~~~~~~p~~~~---l~ 305 (435)
..+++..|++. .. ..+.+++.+ +.+.. .+.++++++.+... +.+. +.++++.+.+|++.+++ ++
T Consensus 251 ~~~i~~~G~~~~~~Kg~~~li~a~-~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 329 (439)
T 3fro_A 251 GVTFMFIGRFDRGQKGVDVLLKAI-EILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYG 329 (439)
T ss_dssp CEEEEEECCSSCTTBCHHHHHHHH-HHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred CcEEEEEcccccccccHHHHHHHH-HHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHH
Confidence 37888899987 43 333333322 33322 35566666543321 1111 24467778899999877 89
Q ss_pred cccEEEEeC----CchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc--CHHHHH
Q 013835 306 QCKAVVHHG----GAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML--DPKVKE 379 (435)
Q Consensus 306 ~~~l~I~hg----G~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll--~~~~~~ 379 (435)
.+|++|.-. -.+++.||+++|+|+|+.. .......++. |.|+ .++.. +.++++++|.+++ |++.++
T Consensus 330 ~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~~~-~~g~-~~~~~--d~~~la~~i~~ll~~~~~~~~ 401 (439)
T 3fro_A 330 SVDFVIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDIITN-ETGI-LVKAG--DPGELANAILKALELSRSDLS 401 (439)
T ss_dssp TCSEEEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHCCT-TTCE-EECTT--CHHHHHHHHHHHHHHTTTTTH
T ss_pred HCCEEEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeEEc-CceE-EeCCC--CHHHHHHHHHHHHhcCHHHHH
Confidence 999999654 2379999999999999764 3445555544 5886 66544 7899999999988 677777
Q ss_pred HHHHHHHHhhccCcHHHHHHHHHHhccccC
Q 013835 380 RAVELAEAMEKEDGVTGAVKAFFKHYSRSK 409 (435)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 409 (435)
++.+.+++..+.-.++..++.++++++.--
T Consensus 402 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 402 KFRENCKKRAMSFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 777777666666788888888877776543
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.41 E-value=1.1e-11 Score=117.02 Aligned_cols=156 Identities=9% Similarity=0.077 Sum_probs=105.5
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh-----CCeEEEEcCCCC--CCCCC---CCCCceEEcCCCChhhh---ccc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT-----GQRGIINKGWGG--LGNLA---EPKDSIYLLDNIPHDWL---FLQ 306 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-----~~~~iv~~~~~~--~~~~~---~~~~~v~~~~~~p~~~~---l~~ 306 (435)
++.++++.|+..... +-++.++++++.. +.++++..++.. .+.+. ...++|.+.++++..++ ++.
T Consensus 205 ~~~vl~~~gr~~~~~--K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 282 (375)
T 3beo_A 205 NRLVLMTAHRRENLG--EPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAAR 282 (375)
T ss_dssp SEEEEEECCCGGGTT--HHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHT
T ss_pred CCeEEEEecccccch--hHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHh
Confidence 456777888754221 2345566666543 345544322211 01111 12369999898887665 899
Q ss_pred ccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHH
Q 013835 307 CKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELA 385 (435)
Q Consensus 307 ~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~ 385 (435)
||++|+.+| +++.||+++|+|+|+....+.. .. +.+.|.|+ .++. +.++++++|.+++ |++.++++.+.+
T Consensus 283 ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e-~v~~g~g~-~v~~---d~~~la~~i~~ll~~~~~~~~~~~~~ 353 (375)
T 3beo_A 283 SYLMLTDSG-GVQEEAPSLGVPVLVLRDTTER---PE-GIEAGTLK-LAGT---DEETIFSLADELLSDKEAHDKMSKAS 353 (375)
T ss_dssp CSEEEECCH-HHHHHHHHHTCCEEECSSCCSC---HH-HHHTTSEE-ECCS---CHHHHHHHHHHHHHCHHHHHHHCCCC
T ss_pred CcEEEECCC-ChHHHHHhcCCCEEEecCCCCC---ce-eecCCceE-EcCC---CHHHHHHHHHHHHhChHhHhhhhhcC
Confidence 999999985 4699999999999988543332 23 34567886 5542 7899999999999 999888877666
Q ss_pred HHhhccCcHHHHHHHHHHhcc
Q 013835 386 EAMEKEDGVTGAVKAFFKHYS 406 (435)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~l~ 406 (435)
+++.+...++++++.++++++
T Consensus 354 ~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 354 NPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp CTTCCSCHHHHHHHHHHHHTT
T ss_pred CCCCCCcHHHHHHHHHHHHhh
Confidence 666556688899999988764
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.40 E-value=9.9e-13 Score=122.53 Aligned_cols=151 Identities=9% Similarity=0.001 Sum_probs=100.8
Q ss_pred cEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCC----CCCCceEEcCCCChhhh---cccccEEEEeC
Q 013835 242 PIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLA----EPKDSIYLLDNIPHDWL---FLQCKAVVHHG 314 (435)
Q Consensus 242 ~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~----~~~~~v~~~~~~p~~~~---l~~~~l~I~hg 314 (435)
.+++..|++.. .+-++.++++++..+.++++++.+...+.+. ++.++|.+.++++..++ +.++|++|...
T Consensus 163 ~~i~~vG~~~~---~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps 239 (342)
T 2iuy_A 163 DFLLFMGRVSP---HKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMS 239 (342)
T ss_dssp SCEEEESCCCG---GGTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECC
T ss_pred CEEEEEecccc---ccCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECC
Confidence 35666788753 3344567788887888888876543222211 12379999999999865 99999999543
Q ss_pred C--------------chHHHHHHHhCCCEEeecCCCChhhHHHHHHH--cCCCCCCCCCCCCCHHHHHHHHHHhcCHHHH
Q 013835 315 G--------------AGTTAAGLRAACPTTIVPFFGDQPFWGERVHA--RGVGPPPIPVDEFSLPKLINAINFMLDPKVK 378 (435)
Q Consensus 315 G--------------~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~--~g~G~~~l~~~~~~~~~l~~~i~~ll~~~~~ 378 (435)
- .+++.||+++|+|+|+... ..+...+++ .+.|+ .++. +.++++++|.++++ .
T Consensus 240 ~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~~~g~-~~~~---d~~~l~~~i~~l~~---~ 308 (342)
T 2iuy_A 240 QAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGEVVGY-GTDF---APDEARRTLAGLPA---S 308 (342)
T ss_dssp CCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEEECCS-SSCC---CHHHHHHHHHTSCC---H
T ss_pred cccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCCCceE-EcCC---CHHHHHHHHHHHHH---H
Confidence 3 3789999999999996654 457788888 77886 5543 78999999999988 4
Q ss_pred HHHHHHH-HHhhccCcHHHHHHHHHHhcc
Q 013835 379 ERAVELA-EAMEKEDGVTGAVKAFFKHYS 406 (435)
Q Consensus 379 ~~~~~~~-~~~~~~~~~~~~~~~i~~~l~ 406 (435)
+++++.. +.+....-+++..+.++++++
T Consensus 309 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 309 DEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp HHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 4444333 233222233444444444443
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.34 E-value=3.7e-11 Score=114.98 Aligned_cols=159 Identities=10% Similarity=0.042 Sum_probs=108.9
Q ss_pred CCcEEEeeCCCCCC-ChHHHHHHHHHHHHHh-CCeEEEEcCCCCC-----CCCC------CCCCceEEcCCCC---hhhh
Q 013835 240 SKPIYIGFGSLPVQ-EPEKMTQIIVEAFEQT-GQRGIINKGWGGL-----GNLA------EPKDSIYLLDNIP---HDWL 303 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~-~~~~~~~~~~~~~~~~-~~~~iv~~~~~~~-----~~~~------~~~~~v~~~~~~p---~~~~ 303 (435)
++.+++..|++... ..+.+++.+....+.. +.++++++.+... +.+. .+.++|.+.+|++ +.++
T Consensus 230 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 230 EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREV 309 (416)
T ss_dssp TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHH
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHH
Confidence 34677888887543 3333444332222222 5677777654321 0111 2457999998765 4444
Q ss_pred ---cccccEEEEeC----CchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CH
Q 013835 304 ---FLQCKAVVHHG----GAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DP 375 (435)
Q Consensus 304 ---l~~~~l~I~hg----G~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~ 375 (435)
++.+|++|..+ ..+++.||+++|+|+|+.+. ..+...+++.+.|+ .++ +.++++++|.+++ |+
T Consensus 310 ~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~-l~~----d~~~la~~i~~ll~~~ 380 (416)
T 2x6q_A 310 NAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGF-LVR----DANEAVEVVLYLLKHP 380 (416)
T ss_dssp HHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEE-EES----SHHHHHHHHHHHHHCH
T ss_pred HHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeE-EEC----CHHHHHHHHHHHHhCH
Confidence 89999999876 35789999999999997653 45677777777886 554 7899999999999 99
Q ss_pred HHHHHHHHHHHHhhc-cCcHHHHHHHHHHhccc
Q 013835 376 KVKERAVELAEAMEK-EDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 376 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~ 407 (435)
+.++++.+.+++... .-.++..++.+++++.+
T Consensus 381 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 381 EVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 988887776666543 46788888888777653
No 39
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.28 E-value=5.7e-12 Score=118.75 Aligned_cols=156 Identities=10% Similarity=0.065 Sum_probs=103.8
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh------CCeEEEEcCCCCCCCCC------CCCCceEEcCCCCh-hhhccc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT------GQRGIINKGWGGLGNLA------EPKDSIYLLDNIPH-DWLFLQ 306 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~------~~~~iv~~~~~~~~~~~------~~~~~v~~~~~~p~-~~~l~~ 306 (435)
++.+++..|+..... -++.++++++.. +.++++++.+ ..+.+. .+.++|.+.++... .++++.
T Consensus 195 ~~~~i~~~G~~~~~K---~~~~li~a~~~l~~~~~~~~~l~i~G~g-~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 270 (374)
T 2iw1_A 195 QQNLLLQVGSDFGRK---GVDRSIEALASLPESLRHNTLLFVVGQD-KPRKFEALAEKLGVRSNVHFFSGRNDVSELMAA 270 (374)
T ss_dssp TCEEEEEECSCTTTT---THHHHHHHHHTSCHHHHHTEEEEEESSS-CCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHH
T ss_pred CCeEEEEeccchhhc---CHHHHHHHHHHhHhccCCceEEEEEcCC-CHHHHHHHHHHcCCCCcEEECCCcccHHHHHHh
Confidence 457788888875432 233455666543 4566666543 222221 13579999998533 334999
Q ss_pred ccEEEE----eCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHH
Q 013835 307 CKAVVH----HGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERA 381 (435)
Q Consensus 307 ~~l~I~----hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~ 381 (435)
+|++|. -|..+++.||+++|+|+|+.+.. .+...+++.+.|+ .++. ..+.++++++|.+++ |++.++++
T Consensus 271 ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~-~~~~-~~~~~~l~~~i~~l~~~~~~~~~~ 344 (374)
T 2iw1_A 271 ADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADANCGT-VIAE-PFSQEQLNEVLRKALTQSPLRMAW 344 (374)
T ss_dssp CSEEEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHHTCEE-EECS-SCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred cCEEEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccCCceE-EeCC-CCCHHHHHHHHHHHHcChHHHHHH
Confidence 999997 34568999999999999987653 4567888888996 6641 237899999999999 99888877
Q ss_pred HHHHHHhhccCcHHHHHHHHHHhc
Q 013835 382 VELAEAMEKEDGVTGAVKAFFKHY 405 (435)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~i~~~l 405 (435)
.+.+++......+...++.+++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~l 368 (374)
T 2iw1_A 345 AENARHYADTQDLYSLPEKAADII 368 (374)
T ss_dssp HHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 777666655443333333333333
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.18 E-value=1.1e-09 Score=106.84 Aligned_cols=154 Identities=18% Similarity=0.207 Sum_probs=103.6
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHH---hCCeEEEEcCCCC--CCCCC----CCCCceE-EcCCCChhh---hcccc
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQ---TGQRGIINKGWGG--LGNLA----EPKDSIY-LLDNIPHDW---LFLQC 307 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~---~~~~~iv~~~~~~--~~~~~----~~~~~v~-~~~~~p~~~---~l~~~ 307 (435)
..+++..|++..... ++.+++++.. .+.++++++.+.. .+.+. +.+++|. +.++ +.+. +++.+
T Consensus 291 ~~~i~~vGrl~~~Kg---~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~a 366 (485)
T 1rzu_A 291 SPLFCVISRLTWQKG---IDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAGC 366 (485)
T ss_dssp SCEEEEESCBSTTTT---HHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHHC
T ss_pred CeEEEEEccCccccC---HHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhcC
Confidence 458888999864332 2334444443 3678887764421 11111 2457887 6888 5554 38999
Q ss_pred cEEEEeCC----chHHHHHHHhCCCEEeecCCCChhhHHHHHHHc---------CCCCCCCCCCCCCHHHHHHHHHHhc-
Q 013835 308 KAVVHHGG----AGTTAAGLRAACPTTIVPFFGDQPFWGERVHAR---------GVGPPPIPVDEFSLPKLINAINFML- 373 (435)
Q Consensus 308 ~l~I~hgG----~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~---------g~G~~~l~~~~~~~~~l~~~i~~ll- 373 (435)
|++|.-+- .++++||+++|+|+|+... ....+.+++. +.|+ .++.. +.++++++|.+++
T Consensus 367 dv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~-l~~~~--d~~~la~~i~~ll~ 439 (485)
T 1rzu_A 367 DAIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGV-QFSPV--TLDGLKQAIRRTVR 439 (485)
T ss_dssp SEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBE-EESSC--SHHHHHHHHHHHHH
T ss_pred CEEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcce-EeCCC--CHHHHHHHHHHHHH
Confidence 99996542 4789999999999997653 4566667665 7886 66544 6899999999987
Q ss_pred ---CHHHHHHHHHHHHHhhccCcHHHHHHHHHHhccc
Q 013835 374 ---DPKVKERAVELAEAMEKEDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 374 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 407 (435)
|++.++++.+.+++ +.-+++..++.++++++.
T Consensus 440 ~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 440 YYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHH
Confidence 77777776655542 445777777777776654
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.13 E-value=5.3e-10 Score=113.93 Aligned_cols=158 Identities=11% Similarity=-0.029 Sum_probs=108.4
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh-----CCeEEEEcCCCCC-----------CCC------CCCCCceEEcCC
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT-----GQRGIINKGWGGL-----------GNL------AEPKDSIYLLDN 297 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-----~~~~iv~~~~~~~-----------~~~------~~~~~~v~~~~~ 297 (435)
++.+++..|++..... ++.+++++... +.++++++++.+. +.+ ..+.++|.+.++
T Consensus 571 ~~~vIl~vGRl~~~KG---id~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~ 647 (816)
T 3s28_A 571 KKPILFTMARLDRVKN---LSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISS 647 (816)
T ss_dssp TSCEEEEECCCCTTTT---HHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECC
T ss_pred CCeEEEEEccCcccCC---HHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccC
Confidence 3578888999864332 34455555543 4677777654420 001 124589999986
Q ss_pred CC----hhhh---cc-cccEEEEeC----CchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHH
Q 013835 298 IP----HDWL---FL-QCKAVVHHG----GAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKL 365 (435)
Q Consensus 298 ~p----~~~~---l~-~~~l~I~hg----G~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l 365 (435)
.+ ..++ +. ++|++|.-. -..++.||+++|+|+|+. +.......++..+.|+ .++.. +.+++
T Consensus 648 ~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg~~Gl-lv~p~--D~e~L 720 (816)
T 3s28_A 648 QMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHGKSGF-HIDPY--HGDQA 720 (816)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBTTTBE-EECTT--SHHHH
T ss_pred ccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccCCcEE-EeCCC--CHHHH
Confidence 54 4556 44 689999664 237999999999999965 4455677777777886 66654 67889
Q ss_pred HHHHH----Hhc-CHHHHHHHHHHHHHhh-ccCcHHHHHHHHHHhccc
Q 013835 366 INAIN----FML-DPKVKERAVELAEAME-KEDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 366 ~~~i~----~ll-~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ 407 (435)
+++|. .++ |++.++++.+.+++.. +.-+++..++.+.++++.
T Consensus 721 A~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 721 ADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp HHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99884 455 8888888887777765 556888888888777653
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.07 E-value=5.8e-09 Score=101.82 Aligned_cols=157 Identities=15% Similarity=0.097 Sum_probs=104.8
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh---CCeEEEEcCCCC--CCCC----CCCCCceE-EcCCCChhh---hccc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT---GQRGIINKGWGG--LGNL----AEPKDSIY-LLDNIPHDW---LFLQ 306 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~---~~~~iv~~~~~~--~~~~----~~~~~~v~-~~~~~p~~~---~l~~ 306 (435)
++.+++..|++.... -++.+++++... +.++++++.+.. .+.+ .+.++++. +.++ +.+. +++.
T Consensus 291 ~~~~i~~vGrl~~~K---g~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~ 366 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQK---GLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIMGG 366 (485)
T ss_dssp TSCEEEEEEEESGGG---CHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHHHH
T ss_pred CCeEEEEeccCcccc---CHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHHHh
Confidence 447777888875322 233345555443 677777764321 1111 12447886 7888 5554 3899
Q ss_pred ccEEEEeC----CchHHHHHHHhCCCEEeecCCCChhhHHHHHHHc---------CCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 307 CKAVVHHG----GAGTTAAGLRAACPTTIVPFFGDQPFWGERVHAR---------GVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 307 ~~l~I~hg----G~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~---------g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
+|++|.-+ ..++++||+++|+|+|+.. -..+...+++. +.|+ .++.. +.++++++|.+++
T Consensus 367 adv~v~pS~~E~~g~~~lEAma~G~PvI~s~----~gg~~e~v~~~~~~~~~~~~~~G~-l~~~~--d~~~la~~i~~ll 439 (485)
T 2qzs_A 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRR----TGGLADTVSDCSLENLADGVASGF-VFEDS--NAWSLLRAIRRAF 439 (485)
T ss_dssp CSEEEECCSCCSSCSHHHHHHHHTCEEEEES----SHHHHHHCCBCCHHHHHTTCCCBE-EECSS--SHHHHHHHHHHHH
T ss_pred CCEEEECCccCCCcHHHHHHHHCCCCEEECC----CCCccceeccCccccccccccceE-EECCC--CHHHHHHHHHHHH
Confidence 99999655 2468999999999999764 34566667665 6886 66544 7899999999987
Q ss_pred ----CHHHHHHHHHHHHHhhccCcHHHHHHHHHHhccccC
Q 013835 374 ----DPKVKERAVELAEAMEKEDGVTGAVKAFFKHYSRSK 409 (435)
Q Consensus 374 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 409 (435)
|++.++++.+.+++ +.-+++..++.++++++.-.
T Consensus 440 ~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 440 VLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp HHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhh
Confidence 77777776655543 45578888888777776543
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.02 E-value=2.8e-08 Score=99.00 Aligned_cols=162 Identities=10% Similarity=0.081 Sum_probs=105.6
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHh-CCeEEEEcCCCC-CCCCC------CCC-CceEEcCCCChhhh---ccccc
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQT-GQRGIINKGWGG-LGNLA------EPK-DSIYLLDNIPHDWL---FLQCK 308 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-~~~~iv~~~~~~-~~~~~------~~~-~~v~~~~~~p~~~~---l~~~~ 308 (435)
++|+ ..|+........+++.+.+..+.. +.+++++++... .+.+. .+. ++|.+.++++..++ +..+|
T Consensus 377 ~~v~-~~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~ad 455 (568)
T 2vsy_A 377 GVVL-CCFNNSYKLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHAD 455 (568)
T ss_dssp SCEE-EECCCGGGCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCS
T ss_pred CEEE-EeCCccccCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCC
Confidence 3444 667764433344555444433333 456665552221 11111 233 79999999987666 89999
Q ss_pred EEEEe---CCchHHHHHHHhCCCEEeecCCCC-hhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHH
Q 013835 309 AVVHH---GGAGTTAAGLRAACPTTIVPFFGD-QPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVE 383 (435)
Q Consensus 309 l~I~h---gG~~s~~Eal~~G~P~l~~P~~~d-Q~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~ 383 (435)
+||.- |+.++++||+++|+|+|+.|-..- -..-+..+...|+.- .+.. +.+++++++.+++ |++.++++.+
T Consensus 456 v~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e-~v~~---~~~~la~~i~~l~~~~~~~~~~~~ 531 (568)
T 2vsy_A 456 LFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDE-MNVA---DDAAFVAKAVALASDPAALTALHA 531 (568)
T ss_dssp EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGG-GBCS---SHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChh-hhcC---CHHHHHHHHHHHhcCHHHHHHHHH
Confidence 99933 556799999999999999764311 112245566667763 4432 7899999999999 9999888887
Q ss_pred HHHHhh---ccCcHHHHHHHHHHhccc
Q 013835 384 LAEAME---KEDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 384 ~~~~~~---~~~~~~~~~~~i~~~l~~ 407 (435)
.+++.. ..-.++..++.+++++..
T Consensus 532 ~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 532 RVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp HHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred HHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 776655 445777777777766643
No 44
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.00 E-value=3.8e-10 Score=94.27 Aligned_cols=135 Identities=16% Similarity=0.240 Sum_probs=96.3
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHh-CCeEEEEcCCCCCCCCC--------CCCCceEEcCCCChhhh---ccccc
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQT-GQRGIINKGWGGLGNLA--------EPKDSIYLLDNIPHDWL---FLQCK 308 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-~~~~iv~~~~~~~~~~~--------~~~~~v~~~~~~p~~~~---l~~~~ 308 (435)
+.+++..|++.. .+-++.++++++.. +.++++++.+...+.+. .+++||.+.++++..++ +..+|
T Consensus 23 ~~~i~~~G~~~~---~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad 99 (177)
T 2f9f_A 23 GDFWLSVNRIYP---EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK 99 (177)
T ss_dssp CSCEEEECCSSG---GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCEEEEEecccc---ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence 455677788753 23345577888776 56777776544333221 14569999999998666 89999
Q ss_pred EEEE---eCC-chHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHH-HHHHH
Q 013835 309 AVVH---HGG-AGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKV-KERAV 382 (435)
Q Consensus 309 l~I~---hgG-~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~-~~~~~ 382 (435)
++|. +.| .+++.||+++|+|+|+.. ...+...+++.+.|+ .+ . .+.++++++|.+++ |++. +++++
T Consensus 100 i~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~~~g~-~~-~--~d~~~l~~~i~~l~~~~~~~~~~~~ 171 (177)
T 2f9f_A 100 GLLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINEKTGY-LV-N--ADVNEIIDAMKKVSKNPDKFKKDCF 171 (177)
T ss_dssp EEEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBTTTEE-EE-C--SCHHHHHHHHHHHHHCTTTTHHHHH
T ss_pred EEEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCCCccE-Ee-C--CCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9997 223 359999999999999764 456677777777886 55 3 37899999999999 8775 66665
Q ss_pred HHHH
Q 013835 383 ELAE 386 (435)
Q Consensus 383 ~~~~ 386 (435)
+.++
T Consensus 172 ~~a~ 175 (177)
T 2f9f_A 172 RRAK 175 (177)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
No 45
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.64 E-value=4.5e-08 Score=80.52 Aligned_cols=144 Identities=9% Similarity=0.021 Sum_probs=89.4
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHh----CCeEEEEcCCCCCCCCC----CCCCceEEcCCCChhhh---cccccE
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQT----GQRGIINKGWGGLGNLA----EPKDSIYLLDNIPHDWL---FLQCKA 309 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~----~~~~iv~~~~~~~~~~~----~~~~~v~~~~~~p~~~~---l~~~~l 309 (435)
+++++..|++..... ++.+++++... +.++++++.+...+.+. +.+.++.+ ++++..++ +.++|+
T Consensus 2 ~~~i~~~G~~~~~Kg---~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKN---QSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTL 77 (166)
T ss_dssp CEEEEEESCCSTTTT---HHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSE
T ss_pred ceEEEEEeccchhcC---HHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCE
Confidence 467888888854332 34466666554 34566554332212221 12338888 99998777 899999
Q ss_pred EEEeC----CchHHHHHHHhCC-CEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHH
Q 013835 310 VVHHG----GAGTTAAGLRAAC-PTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVE 383 (435)
Q Consensus 310 ~I~hg----G~~s~~Eal~~G~-P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~ 383 (435)
+|.-. ..+++.||+++|+ |+|+....+ .....+.+.+.. ++.. +.+++.++|.+++ |++.++++.+
T Consensus 78 ~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~~~~---~~~~--~~~~l~~~i~~l~~~~~~~~~~~~ 149 (166)
T 3qhp_A 78 YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDERSL---FEPN--NAKDLSAKIDWWLENKLERERMQN 149 (166)
T ss_dssp EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSGGGE---ECTT--CHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCCceE---EcCC--CHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99743 2469999999997 999843221 111122222222 3333 7899999999999 9988887777
Q ss_pred HHHHhhccCcHHH
Q 013835 384 LAEAMEKEDGVTG 396 (435)
Q Consensus 384 ~~~~~~~~~~~~~ 396 (435)
.+++..+.-.++.
T Consensus 150 ~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 150 EYAKSALNYTLEN 162 (166)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHCChhh
Confidence 6666544334443
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.64 E-value=1e-07 Score=90.78 Aligned_cols=158 Identities=10% Similarity=0.058 Sum_probs=104.5
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHh-----CCeEEEEcCCCCCC------CCC------CCCCc-------eEEc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQT-----GQRGIINKGWGGLG------NLA------EPKDS-------IYLL 295 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~-----~~~~iv~~~~~~~~------~~~------~~~~~-------v~~~ 295 (435)
++.+++..|++.... -++.+++++... +.++++++++.... .+. .+.++ +.+.
T Consensus 183 ~~~~il~vGr~~~~K---g~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~ 259 (413)
T 3oy2_A 183 DDVLFLNMNRNTARK---RLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINR 259 (413)
T ss_dssp TSEEEECCSCSSGGG---THHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEEC
T ss_pred CceEEEEcCCCchhc---CcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeecc
Confidence 457888889874322 233345554442 56777776544321 111 14444 8888
Q ss_pred CCCChhhh---cccccEEEEeC----CchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCC---------------CC-
Q 013835 296 DNIPHDWL---FLQCKAVVHHG----GAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGV---------------GP- 352 (435)
Q Consensus 296 ~~~p~~~~---l~~~~l~I~hg----G~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~---------------G~- 352 (435)
++++.+++ +++||++|.-+ ..+++.||+++|+|+|+.. .......+.+... |+
T Consensus 260 g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~ 335 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSGDCVYKIKPSAWISVDDRDGIG 335 (413)
T ss_dssp SCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCTTTSEEECCCEEEECTTTCSSC
T ss_pred CcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHccCcccccccccccccccccCcc
Confidence 99998777 89999999644 2368999999999999754 3345555554332 31
Q ss_pred CCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHhhc-cCcHHHHHHHHHHhccc
Q 013835 353 PPIPVDEFSLPKLINAINFML-DPKVKERAVELAEAMEK-EDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 353 ~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~ 407 (435)
..++.. +.++++++| +++ |++.++++.+.+++... .-.++..++.++++++.
T Consensus 336 gl~~~~--d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 336 GIEGII--DVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp CEEEEC--CHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred eeeCCC--CHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 023323 789999999 999 99998888877777653 44777777766666643
No 47
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.47 E-value=1.2e-06 Score=74.34 Aligned_cols=139 Identities=12% Similarity=0.042 Sum_probs=90.9
Q ss_pred CCcEEEeeCCCC-CCC-hHHHHHHHHHHH---HHh-CCeEEEEcCCC--CCCCCC----CCCCceEE-cCCCChhhh---
Q 013835 240 SKPIYIGFGSLP-VQE-PEKMTQIIVEAF---EQT-GQRGIINKGWG--GLGNLA----EPKDSIYL-LDNIPHDWL--- 303 (435)
Q Consensus 240 ~~~v~v~~Gs~~-~~~-~~~~~~~~~~~~---~~~-~~~~iv~~~~~--~~~~~~----~~~~~v~~-~~~~p~~~~--- 303 (435)
+..+++..|++. ... ...+++.+ ..+ +.. +.++++++.+. ..+.+. +.+ +|.+ .++++..++
T Consensus 35 ~~~~i~~~G~~~~~~K~~~~li~a~-~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~ 112 (200)
T 2bfw_A 35 EGVTFMFIGRFDRGQKGVDVLLKAI-EILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVREL 112 (200)
T ss_dssp SCEEEEEESCBCSSSSCHHHHHHHH-HHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHH
T ss_pred CCCEEEEeeccccccCCHHHHHHHH-HHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHH
Confidence 335777888876 433 33333322 323 221 45666665432 111111 233 9999 999997766
Q ss_pred cccccEEEEeC---C-chHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc--CHHH
Q 013835 304 FLQCKAVVHHG---G-AGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML--DPKV 377 (435)
Q Consensus 304 l~~~~l~I~hg---G-~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll--~~~~ 377 (435)
+..+|++|... | .+++.||+++|+|+|+.. -..+...+ ..+.|+ .++.. +.++++++|.+++ |++.
T Consensus 113 ~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~~-~~~~g~-~~~~~--~~~~l~~~i~~l~~~~~~~ 184 (200)
T 2bfw_A 113 YGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-TNETGI-LVKAG--DPGELANAILKALELSRSD 184 (200)
T ss_dssp HTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEES----CHHHHHHC-CTTTCE-EECTT--CHHHHHHHHHHHHHCCHHH
T ss_pred HHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeC----CCChHHHc-CCCceE-EecCC--CHHHHHHHHHHHHhcCHHH
Confidence 89999999755 2 468999999999999764 34566667 667786 56544 7899999999987 7777
Q ss_pred HHHHHHHHHHh
Q 013835 378 KERAVELAEAM 388 (435)
Q Consensus 378 ~~~~~~~~~~~ 388 (435)
++++.+.+++.
T Consensus 185 ~~~~~~~a~~~ 195 (200)
T 2bfw_A 185 LSKFRENCKKR 195 (200)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77666555443
No 48
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.22 E-value=2.1e-07 Score=88.57 Aligned_cols=101 Identities=3% Similarity=-0.193 Sum_probs=69.8
Q ss_pred CeEEEEcCCCCCCCCCCCCCceEEcCCCChhhh---cccccEEEEeC---C-chHHHHHHHhCCCEEeecCCCChhhHHH
Q 013835 271 QRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWL---FLQCKAVVHHG---G-AGTTAAGLRAACPTTIVPFFGDQPFWGE 343 (435)
Q Consensus 271 ~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~---l~~~~l~I~hg---G-~~s~~Eal~~G~P~l~~P~~~dQ~~na~ 343 (435)
.++++++.+.....+ ...++|.+.++++.+++ +++||+||..+ | .++++||+++|+|+|+ ...+ ...
T Consensus 277 ~~l~ivG~~~~~~~l-~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e 350 (413)
T 2x0d_A 277 WKIISVGEKHKDIAL-GKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKD 350 (413)
T ss_dssp CEEEEEESCCCCEEE-ETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBC
T ss_pred eEEEEEcCCchhhhc-CCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cch
Confidence 467666543332222 23468999999999887 89999999654 3 3578999999999997 3332 124
Q ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHH
Q 013835 344 RVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKER 380 (435)
Q Consensus 344 ~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~ 380 (435)
.++....|+ .++.. ++++++++|.+++ |++.+++
T Consensus 351 ~v~~~~~G~-lv~~~--d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 351 LSNWHSNIV-SLEQL--NPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp GGGTBTTEE-EESSC--SHHHHHHHHHHHHHHTC----
T ss_pred hhhcCCCEE-EeCCC--CHHHHHHHHHHHHcCHHHHHH
Confidence 555556785 56654 7899999999999 8777665
No 49
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.16 E-value=7.8e-06 Score=77.54 Aligned_cols=138 Identities=9% Similarity=-0.008 Sum_probs=96.1
Q ss_pred cEEEeeCCCCCCChHHHHHHHHHHHHH--hCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhh---cccccEEEEeC--
Q 013835 242 PIYIGFGSLPVQEPEKMTQIIVEAFEQ--TGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWL---FLQCKAVVHHG-- 314 (435)
Q Consensus 242 ~v~v~~Gs~~~~~~~~~~~~~~~~~~~--~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~---l~~~~l~I~hg-- 314 (435)
.+++..|++.... .+ +..+.+ .+.++++++.+ +... ..+.++|.+.+++|.+++ ++++|++|.-.
T Consensus 223 ~~i~~vGrl~~~K--g~----~~~l~~~~~~~~l~ivG~g-~~~~-~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~ 294 (406)
T 2hy7_A 223 IHAVAVGSMLFDP--EF----FVVASKAFPQVTFHVIGSG-MGRH-PGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYAS 294 (406)
T ss_dssp EEEEEECCTTBCH--HH----HHHHHHHCTTEEEEEESCS-SCCC-TTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSC
T ss_pred cEEEEEecccccc--CH----HHHHHHhCCCeEEEEEeCc-hHHh-cCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCc
Confidence 6778889886432 22 233332 24567766433 2111 235689999999998877 89999999532
Q ss_pred -C-chHHHHHH-------HhCCCEEeecCCCChhhHHHHHHHcCCCCCC-CCCCCCCHHHHHHHHHHhc-CHHHHHHHHH
Q 013835 315 -G-AGTTAAGL-------RAACPTTIVPFFGDQPFWGERVHARGVGPPP-IPVDEFSLPKLINAINFML-DPKVKERAVE 383 (435)
Q Consensus 315 -G-~~s~~Eal-------~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~-l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~ 383 (435)
| .+++.||+ ++|+|+|+... +.....|+ . ++.. +.++++++|.+++ |++ +
T Consensus 295 E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~-l~v~~~--d~~~la~ai~~ll~~~~-~----- 355 (406)
T 2hy7_A 295 EQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSR-FGYTPG--NADSVIAAITQALEAPR-V----- 355 (406)
T ss_dssp SCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSE-EEECTT--CHHHHHHHHHHHHHCCC-C-----
T ss_pred ccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceE-EEeCCC--CHHHHHHHHHHHHhCcc-h-----
Confidence 3 36799999 99999998754 55566785 5 5554 7899999999999 776 0
Q ss_pred HHHHhhccCcHHHHHHHHHHh--ccccC
Q 013835 384 LAEAMEKEDGVTGAVKAFFKH--YSRSK 409 (435)
Q Consensus 384 ~~~~~~~~~~~~~~~~~i~~~--l~~~~ 409 (435)
+..+...++..++.++++ .....
T Consensus 356 ---~~~~~~sw~~~a~~~~~~~~y~~~~ 380 (406)
T 2hy7_A 356 ---RYRQCLNWSDTTDRVLDPRAYPETR 380 (406)
T ss_dssp ---CCSCCCBHHHHHHHHHCGGGSGGGB
T ss_pred ---hhhhcCCHHHHHHHHHHhhcccccC
Confidence 233456899999998888 54443
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.11 E-value=7.1e-06 Score=75.37 Aligned_cols=142 Identities=11% Similarity=-0.019 Sum_probs=96.5
Q ss_pred cEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhh---cccccEEEEe-CC--
Q 013835 242 PIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWL---FLQCKAVVHH-GG-- 315 (435)
Q Consensus 242 ~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~---l~~~~l~I~h-gG-- 315 (435)
.+++..|+++.. +.++.+ ..+.++++++.+... +++ ||.+.+|+|.+++ +.++|..+.. -|
T Consensus 179 ~~i~yaG~l~k~---~~L~~l-----~~~~~f~ivG~G~~~----~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~ 245 (339)
T 3rhz_A 179 REIHFPGNPERF---SFVKEW-----KYDIPLKVYTWQNVE----LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKD 245 (339)
T ss_dssp EEEEECSCTTTC---GGGGGC-----CCSSCEEEEESCCCC----CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGG
T ss_pred cEEEEeCCcchh---hHHHhC-----CCCCeEEEEeCCccc----CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCch
Confidence 567888888742 122222 236778877654432 355 9999999999998 6555544443 22
Q ss_pred --------chHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-C--HHHHHHHHHH
Q 013835 316 --------AGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-D--PKVKERAVEL 384 (435)
Q Consensus 316 --------~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~--~~~~~~~~~~ 384 (435)
-+-+.|+|++|+|+|+.+ ...++..+++.|+|+ .++ +.+++.+++.++. + .++++++++.
T Consensus 246 ~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~-~~~----~~~e~~~~i~~l~~~~~~~m~~na~~~ 316 (339)
T 3rhz_A 246 KEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGW-IVK----DVEEAIMKVKNVNEDEYIELVKNVRSF 316 (339)
T ss_dssp HHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEE-EES----SHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEE-EeC----CHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 246899999999999755 456889999999997 664 4789999998876 3 4566677777
Q ss_pred HHHhhccCcH-HHHHHHHHHhc
Q 013835 385 AEAMEKEDGV-TGAVKAFFKHY 405 (435)
Q Consensus 385 ~~~~~~~~~~-~~~~~~i~~~l 405 (435)
+++++...-. +.+.+.+.+++
T Consensus 317 a~~~~~~~f~k~~l~~~~~~~~ 338 (339)
T 3rhz_A 317 NPILRKGFFTRRLLTESVFQAI 338 (339)
T ss_dssp THHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhc
Confidence 6776665433 45555565544
No 51
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.10 E-value=1.8e-06 Score=80.98 Aligned_cols=95 Identities=16% Similarity=0.138 Sum_probs=69.0
Q ss_pred CceEEcCCCC-hhhhcccccEEEEe-----CCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHH
Q 013835 290 DSIYLLDNIP-HDWLFLQCKAVVHH-----GGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLP 363 (435)
Q Consensus 290 ~~v~~~~~~p-~~~~l~~~~l~I~h-----gG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~ 363 (435)
.++.+.++.. ...+++.+|+++.- +|..+++||+++|+|+|+-|..++..+....+.+.|.++ . .. +.+
T Consensus 260 ~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~-~--~~--d~~ 334 (374)
T 2xci_A 260 GDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGF-E--VK--NET 334 (374)
T ss_dssp SSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEE-E--CC--SHH
T ss_pred CcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEE-E--eC--CHH
Confidence 4677777543 34449999996652 234789999999999998776666666666665667664 2 23 689
Q ss_pred HHHHHHHHhc-CHHHHHHHHHHHHHhhc
Q 013835 364 KLINAINFML-DPKVKERAVELAEAMEK 390 (435)
Q Consensus 364 ~l~~~i~~ll-~~~~~~~~~~~~~~~~~ 390 (435)
+|+++|.+++ | +.++++.+.+++...
T Consensus 335 ~La~ai~~ll~d-~~r~~mg~~ar~~~~ 361 (374)
T 2xci_A 335 ELVTKLTELLSV-KKEIKVEEKSREIKG 361 (374)
T ss_dssp HHHHHHHHHHHS-CCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhH-HHHHHHHHHHHHHHH
Confidence 9999999999 9 888777776666543
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.95 E-value=6.2e-05 Score=73.51 Aligned_cols=144 Identities=6% Similarity=-0.059 Sum_probs=97.1
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEE--cCCCC-C-CCC-C-----CCCCceEEcCCCChhhh---cccc
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIIN--KGWGG-L-GNL-A-----EPKDSIYLLDNIPHDWL---FLQC 307 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~--~~~~~-~-~~~-~-----~~~~~v~~~~~~p~~~~---l~~~ 307 (435)
.++|.++++..+..+ .+++...+++++.+...+|. .|... . ..+ . .+.+++.+.+.+|..+. +..+
T Consensus 441 ~v~Fg~fn~~~Ki~p-~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~a 519 (631)
T 3q3e_A 441 VVNIGIASTTMKLNP-YFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNC 519 (631)
T ss_dssp EEEEEEEECSTTCCH-HHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTC
T ss_pred eEEEEECCccccCCH-HHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcC
Confidence 478888888776654 47777888888877665542 33221 1 000 0 13468999999998775 7999
Q ss_pred cEEEEe---CCchHHHHHHHhCCCEEeecCCCCh-hhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHH
Q 013835 308 KAVVHH---GGAGTTAAGLRAACPTTIVPFFGDQ-PFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAV 382 (435)
Q Consensus 308 ~l~I~h---gG~~s~~Eal~~G~P~l~~P~~~dQ-~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~ 382 (435)
|+++.- +|.+|++|||++|+|+|..+-..=. ..-+-.+...|+.- .+-.. +.++..+...++. |++.+++++
T Consensus 520 DIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE-~LIA~--d~eeYv~~Av~La~D~~~l~~LR 596 (631)
T 3q3e_A 520 DMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPE-WLIAN--TVDEYVERAVRLAENHQERLELR 596 (631)
T ss_dssp SEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCG-GGEES--SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred cEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCc-ceecC--CHHHHHHHHHHHhCCHHHHHHHH
Confidence 999943 6789999999999999998744211 12223344556651 11112 6899999999999 998888776
Q ss_pred HHHHHh
Q 013835 383 ELAEAM 388 (435)
Q Consensus 383 ~~~~~~ 388 (435)
+-.++.
T Consensus 597 ~~Lr~~ 602 (631)
T 3q3e_A 597 RYIIEN 602 (631)
T ss_dssp HHHHHS
T ss_pred HHHHHH
Confidence 655443
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.92 E-value=0.00018 Score=73.15 Aligned_cols=161 Identities=12% Similarity=0.068 Sum_probs=110.4
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCC--CC-------CCCCCceEEcCCCChhhh---ccccc
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLG--NL-------AEPKDSIYLLDNIPHDWL---FLQCK 308 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~--~~-------~~~~~~v~~~~~~p~~~~---l~~~~ 308 (435)
.++|.++....+..++ .+....+++++.+.-.+|........ .+ .-.++++.+.+..|..+. +..+|
T Consensus 523 ~v~f~~fN~~~Ki~p~-~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~D 601 (723)
T 4gyw_A 523 AIVYCNFNQLYKIDPS-TLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLAD 601 (723)
T ss_dssp SEEEECCSCGGGCCHH-HHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCS
T ss_pred CEEEEeCCccccCCHH-HHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCe
Confidence 4788888887776665 67878899999887777665433211 01 113578999999988765 78999
Q ss_pred EEEE---eCCchHHHHHHHhCCCEEeecCC-CChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc-CHHHHHHHHH
Q 013835 309 AVVH---HGGAGTTAAGLRAACPTTIVPFF-GDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVE 383 (435)
Q Consensus 309 l~I~---hgG~~s~~Eal~~G~P~l~~P~~-~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll-~~~~~~~~~~ 383 (435)
+++- .+|.+|.+|||++|||+|.++-. +--..-+-.+..+|+.- .+ .. +.++-.+...++- |++.+...++
T Consensus 602 i~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e-~i-a~--~~~~Y~~~a~~la~d~~~l~~lr~ 677 (723)
T 4gyw_A 602 VCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLE-LI-AK--NRQEYEDIAVKLGTDLEYLKKVRG 677 (723)
T ss_dssp EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGG-GB-CS--SHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcc-cc-cC--CHHHHHHHHHHHhcCHHHHHHHHH
Confidence 9995 78889999999999999999833 22333444666667773 33 22 6788888888888 9877766654
Q ss_pred HHHH-hhcc--CcHHHHHHHHHHhcc
Q 013835 384 LAEA-MEKE--DGVTGAVKAFFKHYS 406 (435)
Q Consensus 384 ~~~~-~~~~--~~~~~~~~~i~~~l~ 406 (435)
--+. .... -..++-+..+|+.++
T Consensus 678 ~l~~~~~~s~l~d~~~~~~~le~a~~ 703 (723)
T 4gyw_A 678 KVWKQRISSPLFNTKQYTMELERLYL 703 (723)
T ss_dssp HHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCcCHHHHHHHHHHHHH
Confidence 3322 2221 245566666666664
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.82 E-value=3.4e-05 Score=75.71 Aligned_cols=155 Identities=11% Similarity=0.056 Sum_probs=97.0
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHh---CCeEEEEcCCCCCC--CC----CCCCCceEEcCCCChhhh---ccccc
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQT---GQRGIINKGWGGLG--NL----AEPKDSIYLLDNIPHDWL---FLQCK 308 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~---~~~~iv~~~~~~~~--~~----~~~~~~v~~~~~~p~~~~---l~~~~ 308 (435)
.++++..|++.... -++.+++++..+ +.++++...+.... .+ ...+.++.+....+...+ ++.||
T Consensus 327 ~p~i~~vgRl~~~K---g~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 403 (536)
T 3vue_A 327 IPLIAFIGRLEEQK---GPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGAD 403 (536)
T ss_dssp SCEEEEECCBSGGG---CHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCS
T ss_pred CcEEEEEeeccccC---ChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhh
Confidence 47788888886433 334456666543 56677665432210 11 125789999998887665 89999
Q ss_pred EEEEeCC----chHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCC--------CCCCCHHHHHHHHHHhc---
Q 013835 309 AVVHHGG----AGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIP--------VDEFSLPKLINAINFML--- 373 (435)
Q Consensus 309 l~I~hgG----~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~--------~~~~~~~~l~~~i~~ll--- 373 (435)
+||.-+= ..+++||+++|+|+|+.. .....+.+++...|. ... .+..+.++|.++|++++
T Consensus 404 ~~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~dg~~G~-~~~~~~~~g~l~~~~d~~~la~ai~ral~~~ 478 (536)
T 3vue_A 404 VLAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIEGKTGF-HMGRLSVDCKVVEPSDVKKVAATLKRAIKVV 478 (536)
T ss_dssp EEEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCBTTTEE-ECCCCCSCTTCCCHHHHHHHHHHHHHHHHHT
T ss_pred eeecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeCCCCcc-ccccCCCceeEECCCCHHHHHHHHHHHHHhc
Confidence 9997642 258999999999999654 444566666544442 111 12225789999997755
Q ss_pred -CHHHHHHHHHHHHHhhc-cCcHHHHHHHHHHhccc
Q 013835 374 -DPKVKERAVELAEAMEK-EDGVTGAVKAFFKHYSR 407 (435)
Q Consensus 374 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~ 407 (435)
++++++. +++.++ .-+++++++..+++++.
T Consensus 479 ~~~~~~~~----~~~am~~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 479 GTPAYEEM----VRNCMNQDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp TSHHHHHH----HHHHHHSCCSSHHHHHHHHHHHHT
T ss_pred CcHHHHHH----HHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3444332 222233 34788888888887755
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.58 E-value=0.003 Score=58.27 Aligned_cols=132 Identities=15% Similarity=0.154 Sum_probs=75.7
Q ss_pred CCCcEEEeeCCC--CCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCC----CCCCCc-eEEcCCCChhhh---ccccc
Q 013835 239 GSKPIYIGFGSL--PVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNL----AEPKDS-IYLLDNIPHDWL---FLQCK 308 (435)
Q Consensus 239 ~~~~v~v~~Gs~--~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~----~~~~~~-v~~~~~~p~~~~---l~~~~ 308 (435)
+++.|.+..|+. ...-+.+.+..+++.+.+.+.++++..++.+.+.. ...+.+ +.+.+-.+..++ +++||
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~ 263 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCN 263 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCC
Confidence 346788888875 22333445566778787778888875543332111 112223 444555555554 89999
Q ss_pred EEEEe-CCchHHHHHHHhCCCEEee--cCC-------CCh------hhHHHHHHH---cCCCC-CCCCCCCCCHHHHHHH
Q 013835 309 AVVHH-GGAGTTAAGLRAACPTTIV--PFF-------GDQ------PFWGERVHA---RGVGP-PPIPVDEFSLPKLINA 368 (435)
Q Consensus 309 l~I~h-gG~~s~~Eal~~G~P~l~~--P~~-------~dQ------~~na~~v~~---~g~G~-~~l~~~~~~~~~l~~~ 368 (435)
++|+. +|. +.=|.+.|+|+|++ |.. +++ ...+. +.. ..|.. ..-=..+++++++.++
T Consensus 264 ~~i~~DsG~--~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~vl~~~~~C~-C~~~~~~~C~~~~~~Cm~~I~~~~V~~a 340 (349)
T 3tov_A 264 LLITNDSGP--MHVGISQGVPIVALYGPSNPFFYGPYQAHAIVLETMDSYE-IGKSMKKIIKEGNYKGLSVISEEQVIKA 340 (349)
T ss_dssp EEEEESSHH--HHHHHTTTCCEEEECSSCCHHHHSCTTCSEEEECHHHHHH-HHHHTTCCCCGGGCSTTTTSCHHHHHHH
T ss_pred EEEECCCCH--HHHHHhcCCCEEEEECCCCccccCCCCCCeEEEeCCCCcC-ccCCccCCCCCCccchhhcCCHHHHHHH
Confidence 99998 444 33488999999996 221 111 11222 333 22310 0011346788999998
Q ss_pred HHHhc
Q 013835 369 INFML 373 (435)
Q Consensus 369 i~~ll 373 (435)
++++|
T Consensus 341 ~~~lL 345 (349)
T 3tov_A 341 AETLL 345 (349)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88876
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.41 E-value=0.001 Score=61.38 Aligned_cols=93 Identities=13% Similarity=0.094 Sum_probs=57.9
Q ss_pred CCCcEEEeeCC-C--CCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCC---CCC-CC----Cce-EEcCCCChhhh---
Q 013835 239 GSKPIYIGFGS-L--PVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGN---LAE-PK----DSI-YLLDNIPHDWL--- 303 (435)
Q Consensus 239 ~~~~v~v~~Gs-~--~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~---~~~-~~----~~v-~~~~~~p~~~~--- 303 (435)
+++.|.+..|+ . ...-+.+.+..+++.+.+.+.++++..++.+.+. +.+ .+ .++ .+.+..+..++
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~al 258 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVIL 258 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHH
Confidence 34678888887 3 1223334455577777766888887654332111 111 22 234 44555655554
Q ss_pred cccccEEEEeCCchHHHHHHHhCCCEEee
Q 013835 304 FLQCKAVVHHGGAGTTAAGLRAACPTTIV 332 (435)
Q Consensus 304 l~~~~l~I~hgG~~s~~Eal~~G~P~l~~ 332 (435)
+++||++|+.- .|+++-|.+.|+|+|++
T Consensus 259 i~~a~l~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 259 IAACKAIVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHTSSEEEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHhCCEEEecC-CHHHHHHHHcCCCEEEE
Confidence 89999999984 33566699999999987
No 57
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=97.33 E-value=0.0045 Score=59.64 Aligned_cols=105 Identities=10% Similarity=0.050 Sum_probs=74.3
Q ss_pred eE-EcCCCChhhh---cccccEEEEeC---Cc-hHHHHHHHhCC-----CEEeecCCC--ChhhHHHHHHHcCCCCCCCC
Q 013835 292 IY-LLDNIPHDWL---FLQCKAVVHHG---GA-GTTAAGLRAAC-----PTTIVPFFG--DQPFWGERVHARGVGPPPIP 356 (435)
Q Consensus 292 v~-~~~~~p~~~~---l~~~~l~I~hg---G~-~s~~Eal~~G~-----P~l~~P~~~--dQ~~na~~v~~~g~G~~~l~ 356 (435)
++ +.+++++.++ ++.||+||.-+ |+ .++.||+++|+ |+|+....+ ++. ..|+ .++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---------~~g~-lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---------TSAL-IVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---------TTSE-EEC
T ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---------CCeE-EEC
Confidence 55 4688999887 89999999766 44 58999999998 666554332 232 2465 566
Q ss_pred CCCCCHHHHHHHHHHhc-C-HHHHHHHHHHHHHhhccCcHHHHHHHHHHhcccc
Q 013835 357 VDEFSLPKLINAINFML-D-PKVKERAVELAEAMEKEDGVTGAVKAFFKHYSRS 408 (435)
Q Consensus 357 ~~~~~~~~l~~~i~~ll-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 408 (435)
+. +.++++++|.++| + ++.+++..+..++......++..++.+.+.++..
T Consensus 403 p~--d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 PY--DRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp TT--CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 54 6899999999999 4 5555555444444444467888888888877654
No 58
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=96.68 E-value=0.006 Score=60.20 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=70.2
Q ss_pred eEEc-CCCChh---------hhcccccEEEEeCC----chHHHHHHHhCCCEEeecCCCChhhHHHHHHHc-------CC
Q 013835 292 IYLL-DNIPHD---------WLFLQCKAVVHHGG----AGTTAAGLRAACPTTIVPFFGDQPFWGERVHAR-------GV 350 (435)
Q Consensus 292 v~~~-~~~p~~---------~~l~~~~l~I~hgG----~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~-------g~ 350 (435)
|++. .|++.. ++++.||+||..+= ..+.+||+++|+|+|+.-.. .....+.+. +.
T Consensus 494 VIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g----G~~d~V~dg~~~~~~~~t 569 (725)
T 3nb0_A 494 MIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS----GFGSYMEDLIETNQAKDY 569 (725)
T ss_dssp EEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB----HHHHHHHTTSCHHHHHHT
T ss_pred EEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC----ChhhhhhccccccCCCCc
Confidence 3444 588764 34899999998762 26999999999999965543 344444432 35
Q ss_pred CCCCCC-CCCCCHHH----HHHHHHHhc--CHHHHHHHHHHHHHhhccCcHHHHHHHHHHhcc
Q 013835 351 GPPPIP-VDEFSLPK----LINAINFML--DPKVKERAVELAEAMEKEDGVTGAVKAFFKHYS 406 (435)
Q Consensus 351 G~~~l~-~~~~~~~~----l~~~i~~ll--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 406 (435)
|+ .+. .+..+.++ |.+++..++ ++..+.++++.+++....-.+++.++..++.++
T Consensus 570 G~-lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye 631 (725)
T 3nb0_A 570 GI-YIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQ 631 (725)
T ss_dssp TE-EEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHH
T ss_pred eE-EEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 75 453 23334444 455555444 567777777777777666677777766655543
No 59
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.46 E-value=0.022 Score=51.83 Aligned_cols=127 Identities=14% Similarity=0.033 Sum_probs=70.0
Q ss_pred CCcEEEeeCCCC--CCChHHHHHHHHHHHHHhCCeEEEEcCCCCCC----CCCCCCCceEEcCCCChhhh---cccccEE
Q 013835 240 SKPIYIGFGSLP--VQEPEKMTQIIVEAFEQTGQRGIINKGWGGLG----NLAEPKDSIYLLDNIPHDWL---FLQCKAV 310 (435)
Q Consensus 240 ~~~v~v~~Gs~~--~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~----~~~~~~~~v~~~~~~p~~~~---l~~~~l~ 310 (435)
++.|.+..|+.. ..-+.+.+..+++.+.+.+.++++..|...+. .+.+...++.+.+..+..++ +++||++
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~l~ 257 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFV 257 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCSEE
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCCEE
Confidence 456777777642 22233344556666655577777653332111 11111234555665555555 8999999
Q ss_pred EEe-CCchHHHHHHHhCCCEEee--cCCCChh----hHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 311 VHH-GGAGTTAAGLRAACPTTIV--PFFGDQP----FWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 311 I~h-gG~~s~~Eal~~G~P~l~~--P~~~dQ~----~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
|+. .|..-+ |.+.|+|+|++ |...... .+...+. |- .--.++++++++.+++.+++
T Consensus 258 I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~----~~-~~cm~~I~~~~V~~~i~~~l 320 (326)
T 2gt1_A 258 VSVDTGLSHL--TAALDRPNITVYGPTDPGLIGGYGKNQMVCR----AP-GNELSQLTANAVKQFIEENA 320 (326)
T ss_dssp EEESSHHHHH--HHHTTCCEEEEESSSCHHHHCCCSSSEEEEE----CG-GGCGGGCCHHHHHHHHHHTT
T ss_pred EecCCcHHHH--HHHcCCCEEEEECCCChhhcCCCCCCceEec----CC-cccccCCCHHHHHHHHHHHH
Confidence 999 555333 77799999998 3211100 0000000 10 01124668999999999987
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=96.09 E-value=0.032 Score=53.43 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=69.4
Q ss_pred ceEEcCCCChhhh---cccccEEEEeC---Cch-HHHHHHHhC---CCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCC
Q 013835 291 SIYLLDNIPHDWL---FLQCKAVVHHG---GAG-TTAAGLRAA---CPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEF 360 (435)
Q Consensus 291 ~v~~~~~~p~~~~---l~~~~l~I~hg---G~~-s~~Eal~~G---~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~ 360 (435)
.|++.+.+++.++ +..||+++.-+ |+| +..||+++| .|+|+--..+ .+..+. ..|+ .+++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~--~~al-lVnP~-- 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG--EYCR-SVNPF-- 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG--GGSE-EECTT--
T ss_pred CEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC--CCEE-EECCC--
Confidence 5888888888777 89999999766 665 569999996 6766554443 223331 2466 67655
Q ss_pred CHHHHHHHHHHhc-C-H-HHHHHHHHHHHHhhccCcHHHHHHHHHHhc
Q 013835 361 SLPKLINAINFML-D-P-KVKERAVELAEAMEKEDGVTGAVKAFFKHY 405 (435)
Q Consensus 361 ~~~~l~~~i~~ll-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 405 (435)
+.++++++|.++| + + +.+++.+++.+... ......-++.+.+.|
T Consensus 424 D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~-~~d~~~W~~~fl~~L 470 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGPRQRAEAAARRRDAAR-PWTLEAWVQAQLDGL 470 (496)
T ss_dssp BHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT-TCBHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHH
Confidence 7899999999998 4 3 44555555555554 455554444444444
No 61
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=92.70 E-value=3.3 Score=33.39 Aligned_cols=129 Identities=17% Similarity=0.090 Sum_probs=67.5
Q ss_pred HHHHHHcCCCcEEEeeCC-CCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCCh-hhh-ccccc
Q 013835 232 LVKWLEAGSKPIYIGFGS-LPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPH-DWL-FLQCK 308 (435)
Q Consensus 232 l~~~~~~~~~~v~v~~Gs-~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~-~~~-l~~~~ 308 (435)
+.+++. +....+|+.|. .. +-....++..+.+-+++-+....+.+...+.-+...+++..+. +.+ ...+|
T Consensus 37 lg~~La-~~g~~lVsGGg~~G------im~aa~~gAl~~gG~tigVlP~~~~~~~~~~~~~~i~~~~~~~Rk~~m~~~sd 109 (176)
T 2iz6_A 37 LGKQIA-THGWILLTGGRSLG------VMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPIVTGLGSARDNINALSSN 109 (176)
T ss_dssp HHHHHH-HTTCEEEEECSSSS------HHHHHHHHHHHTTCCEEEEECC-----CCTTCSEEEECCCCSSSCCCCGGGCS
T ss_pred HHHHHH-HCCCEEEECCCccC------HhHHHHHHHHHcCCEEEEEeCchhhhhhccCCceeEEcCCHHHHHHHHHHhCC
Confidence 344443 35677888776 43 2233445554555555544432221111111233455565543 333 56677
Q ss_pred EEE-EeCCchHHH---HHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 309 AVV-HHGGAGTTA---AGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 309 l~I-~hgG~~s~~---Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
.|| --||.||+. |++.+++|++++|.+. .....+...-... ..-.+ +++++.+.+.+.+
T Consensus 110 a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~-i~~~~--~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 110 VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGL-VHVAA--DVAGAIAAVKQLL 172 (176)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTT-EEEES--SHHHHHHHHHHHH
T ss_pred EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCe-EEEcC--CHHHHHHHHHHHH
Confidence 655 456677755 4577999999999832 2223444433332 22222 6788887777653
No 62
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=90.81 E-value=0.68 Score=47.06 Aligned_cols=114 Identities=9% Similarity=-0.078 Sum_probs=79.9
Q ss_pred CCCceE-EcCCCChhhhcccccEEEEeCCchHHHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCC-------
Q 013835 288 PKDSIY-LLDNIPHDWLFLQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDE------- 359 (435)
Q Consensus 288 ~~~~v~-~~~~~p~~~~l~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~------- 359 (435)
..+.+. +.++.+..+++..+|++||--.. .+.|.+..++|+|.+..-.|+..+ + --|. ..+..+
T Consensus 596 ~~~~~~~~~~~~di~~ll~~aD~lITDySS-v~fD~~~l~kPiif~~~D~~~Y~~-----~-~rg~-y~d~~~~~pg~~~ 667 (729)
T 3l7i_A 596 YENFAIDVSNYNDVSELFLISDCLITDYSS-VMFDYGILKRPQFFFAYDIDKYDK-----G-LRGF-YMNYMEDLPGPIY 667 (729)
T ss_dssp CTTTEEECTTCSCHHHHHHTCSEEEESSCT-HHHHHGGGCCCEEEECTTTTTTTS-----S-CCSB-SSCTTSSSSSCEE
T ss_pred cCCcEEeCCCCcCHHHHHHHhCEEEeechH-HHHhHHhhCCCEEEecCCHHHHhh-----c-cCCc-ccChhHhCCCCeE
Confidence 334444 34466777889999999999877 999999999999998765555432 1 1222 222211
Q ss_pred CCHHHHHHHHHHhc--CHHHHHHHHHHHHHhhc---cCcHHHHHHHHHHhccccC
Q 013835 360 FSLPKLINAINFML--DPKVKERAVELAEAMEK---EDGVTGAVKAFFKHYSRSK 409 (435)
Q Consensus 360 ~~~~~l~~~i~~ll--~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~~ 409 (435)
-+.++|.++|.... +..++++.++..+++.. ..+++++++.|.+......
T Consensus 668 ~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~~~~~ 722 (729)
T 3l7i_A 668 TEPYGLAKELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDIKEQL 722 (729)
T ss_dssp SSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHhhhhccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcCcCcc
Confidence 26899999998877 46778888888888753 3467899999887665444
No 63
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=86.35 E-value=7 Score=34.92 Aligned_cols=165 Identities=10% Similarity=-0.007 Sum_probs=74.6
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccc----cEEEEeCCc
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQC----KAVVHHGGA 316 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~----~l~I~hgG~ 316 (435)
+++++. |.........+.+.+++..++.+.+-+++.++-....-..-|..|.....- .++.+.. .-..-.||.
T Consensus 103 ~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~~~~phtrp~~V~~~at~--~~l~~~~~~~~~~~~ipggi 179 (319)
T 2p90_A 103 PFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAPMTVPHTRPTVVTAHGNS--TDRLKDQVSLDTRMTVPGSA 179 (319)
T ss_dssp EEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEESCCTTSCCCEEEEESS--GGGCSSCCCCCCCEEECCCH
T ss_pred eEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCccCCCCCCCCCCeEEEeCC--HHHHhhhhccccCcEEeccH
Confidence 344444 565556667888888888889999888877654321101123344433322 2221111 111223555
Q ss_pred hH--HHHHHHhCCCEEee----c---CCCChhhHHH-HHHHcC--CCCCCCCCCCC--CHHHHHHHHHHhc--CHHHHHH
Q 013835 317 GT--TAAGLRAACPTTIV----P---FFGDQPFWGE-RVHARG--VGPPPIPVDEF--SLPKLINAINFML--DPKVKER 380 (435)
Q Consensus 317 ~s--~~Eal~~G~P~l~~----P---~~~dQ~~na~-~v~~~g--~G~~~l~~~~~--~~~~l~~~i~~ll--~~~~~~~ 380 (435)
+. ..++...|.|.+++ | .....+.-|. .++... .|+ .++.+++ ..+++.+.|.++. +++..+-
T Consensus 180 ~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl-~id~~~L~e~A~~~e~~i~~l~~~~~e~~~~ 258 (319)
T 2p90_A 180 SLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADL-NLPLLALERDAEKVHRQLMEQTEESSEIQRV 258 (319)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 44 45567899999996 4 2233343333 333221 354 4554433 3466677777776 5665553
Q ss_pred HHHHHHHhhc-------------------cCcHHHHHHHHHHhccccC
Q 013835 381 AVELAEAMEK-------------------EDGVTGAVKAFFKHYSRSK 409 (435)
Q Consensus 381 ~~~~~~~~~~-------------------~~~~~~~~~~i~~~l~~~~ 409 (435)
.+.+-++.-. ....+.++..+|++|++.+
T Consensus 259 V~~LE~~~D~~~~~~~~~~~~~~~~~~~~~ps~d~i~~efE~fL~~~~ 306 (319)
T 2p90_A 259 VGALEQQYDSELERYRNRHPQAVMPGESELPSGDEIGAEFEKFLADLD 306 (319)
T ss_dssp HHHHHHHHHHHHHHCC--------------------------------
T ss_pred HHHHHhhhhhhhhhhcccccccccccccCCCCHHHHHHHHHHHHHhcC
Confidence 3333322211 1136789999999998664
No 64
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=84.14 E-value=4.9 Score=36.32 Aligned_cols=165 Identities=13% Similarity=0.094 Sum_probs=86.3
Q ss_pred cEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhccc----ccEEEEeCCch
Q 013835 242 PIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQ----CKAVVHHGGAG 317 (435)
Q Consensus 242 ~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~----~~l~I~hgG~~ 317 (435)
.+++-.|-........+...+++..++.+.+-+++.++-....-..-|..|..... ..++.+. ..-+-.-+|.+
T Consensus 143 ~~LlL~G~eP~~~w~~fa~~vl~~a~~~gV~~vvtLgglp~~vphtRp~~V~~~at--~~el~~~~~~~~~~~~gp~Gis 220 (351)
T 2wam_A 143 PFLLLAGLEPDLKWERFITAVRLLAERLGVRQTIGLGTVPMAVPHTRPITMTAHSN--NRELISDFQPSISEIQVPGSAS 220 (351)
T ss_dssp EEEEEEEECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEESCCTTSCCCEEEEES--SGGGGTTSCCCCCSEEEECCHH
T ss_pred cEEEEECCCChhHHHHHHHHHHHHHHHhCCCEEEEEecccCCCCCccCcceEEEEC--CHHHHHhcCCccCcccccccHH
Confidence 34444455555566778888888889999998888765432111112334443332 2222111 11133455644
Q ss_pred H--HHHHHHhCCCEEee----cCC---CChhhHHH-HHHHcC--CCCCCCCCCCC--CHHHHHHHHHHhc--CHHHHHHH
Q 013835 318 T--TAAGLRAACPTTIV----PFF---GDQPFWGE-RVHARG--VGPPPIPVDEF--SLPKLINAINFML--DPKVKERA 381 (435)
Q Consensus 318 s--~~Eal~~G~P~l~~----P~~---~dQ~~na~-~v~~~g--~G~~~l~~~~~--~~~~l~~~i~~ll--~~~~~~~~ 381 (435)
. ..++...|.|.+++ |.- ..-+.-|. .++... .|+ .++.+++ ..+++.+.|.++. +++..+-.
T Consensus 221 glL~~~~~~~Gi~a~~l~~~vP~Yla~~pdP~AA~alL~~L~~llgl-~ip~~~L~e~Ae~ie~~i~el~~~~~e~~~~V 299 (351)
T 2wam_A 221 NLLEYRMAQHGHEVVGFTVHVPHYLTQTDYPAAAQALLEQVAKTGSL-QLPLAVLAEAAAEVQAKIDEQVQASAEVAQVV 299 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEeCCccccCCCCHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 4 45667889999997 432 12233333 333321 354 4554443 3467777787777 66655543
Q ss_pred HHHHHHhhc----------------cCcHHHHHHHHHHhccccC
Q 013835 382 VELAEAMEK----------------EDGVTGAVKAFFKHYSRSK 409 (435)
Q Consensus 382 ~~~~~~~~~----------------~~~~~~~~~~i~~~l~~~~ 409 (435)
+.+-++.-. ....+.++..+|++|++.+
T Consensus 300 ~~LE~qyD~~~~~~~~~~l~~~~~~~ps~dei~~efErfL~~~~ 343 (351)
T 2wam_A 300 AALERQYDAFIDAQENRSLLTRDEDLPSGDELGAEFERFLAQQA 343 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTC-------------CHHHHHHHHHHH
T ss_pred HHHHhhhchhhhhcccccccccccCCCCHHHHHHHHHHHHHhcC
Confidence 333333211 1346789999999998654
No 65
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=81.58 E-value=13 Score=30.37 Aligned_cols=49 Identities=14% Similarity=0.232 Sum_probs=35.0
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeCCCc------HHHHHhcCceeEEcc
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNF------KDFVLTAGLEFYPLD 50 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~------~~~~~~~g~~~~~i~ 50 (435)
.+.++.|=..-.+.+|-+...+|++|.|+..-.. ...++.-++++...+
T Consensus 34 ~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L~v~~~~~g 88 (196)
T 1g5t_A 34 FTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMA 88 (196)
T ss_dssp EESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGTCEEEECC
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhCCcEEEEcc
Confidence 3556788888888888888899999999953221 234445567777776
No 66
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=77.76 E-value=3 Score=36.47 Aligned_cols=53 Identities=11% Similarity=0.154 Sum_probs=40.0
Q ss_pred ccccEEEEeCCchHHHHHHHh------CCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcC
Q 013835 305 LQCKAVVHHGGAGTTAAGLRA------ACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLD 374 (435)
Q Consensus 305 ~~~~l~I~hgG~~s~~Eal~~------G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll~ 374 (435)
..+|++|+-||=||+++++.. ++|++.+|.. -+|. + .++.++++.+++..+++
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-------------~lgf--l--~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-------------HLGF--Y--ADWRPAEADKLVKLLAK 92 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-------------SCCS--S--CCBCGGGHHHHHHHHHT
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-------------CCCc--C--CcCCHHHHHHHHHHHHc
Confidence 468999999999999999875 8999999851 1332 2 23357788888888773
No 67
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=77.47 E-value=31 Score=28.99 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=23.0
Q ss_pred CcCEEEe-CCcc-hhHHHHHHHcCCCEEEeecc
Q 013835 95 KADAIIA-NPPA-YGHVHVAEALKIPIHIFFTM 125 (435)
Q Consensus 95 ~pDlVi~-d~~~-~~~~~~A~~~~iP~v~~~~~ 125 (435)
.||+||+ |+.. ..++.=|.++|||+|.+.-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 5999975 6532 34567799999999998643
No 68
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=76.98 E-value=13 Score=33.27 Aligned_cols=73 Identities=16% Similarity=0.251 Sum_probs=46.6
Q ss_pred HHHHHHHHHHCCCeEEEEeC---CCcHHHHHhcCceeEEccccccCCCCCCCCCchhhHHHHHHHHHHHHHhhccCCCcc
Q 013835 13 FVAIGKRLQDYGHRVRLATH---SNFKDFVLTAGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKEIIYSLLPACRDPDLD 89 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~---~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
|..+|+.|.++||+|+..=. +...+.+++.|+++.. +. .+..+.
T Consensus 17 ms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~-g~---------~~~~l~----------------------- 63 (326)
T 3eag_A 17 MGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYE-GF---------DAAQLD----------------------- 63 (326)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEE-SC---------CGGGGG-----------------------
T ss_pred HHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEEC-CC---------CHHHcC-----------------------
Confidence 55789999999999998832 2234556677877653 20 000000
Q ss_pred CCcccCcCEEEeCCcc---hhHHHHHHHcCCCEEE
Q 013835 90 SGIAFKADAIIANPPA---YGHVHVAEALKIPIHI 121 (435)
Q Consensus 90 ~~~~~~pDlVi~d~~~---~~~~~~A~~~~iP~v~ 121 (435)
...+|+||..+-. .+-+..|+..|+|++.
T Consensus 64 ---~~~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~ 95 (326)
T 3eag_A 64 ---EFKADVYVIGNVAKRGMDVVEAILNLGLPYIS 95 (326)
T ss_dssp ---SCCCSEEEECTTCCTTCHHHHHHHHTTCCEEE
T ss_pred ---CCCCCEEEECCCcCCCCHHHHHHHHcCCcEEe
Confidence 0157999986433 3446788999999986
No 69
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=74.42 E-value=21 Score=28.19 Aligned_cols=125 Identities=10% Similarity=0.022 Sum_probs=62.5
Q ss_pred CcEEEeeCCCCCCChHH-HHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCC--CceEEcCCCChh--hhcccccEEEEeC-
Q 013835 241 KPIYIGFGSLPVQEPEK-MTQIIVEAFEQTGQRGIINKGWGGLGNLAEPK--DSIYLLDNIPHD--WLFLQCKAVVHHG- 314 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~-~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~--~~v~~~~~~p~~--~~l~~~~l~I~hg- 314 (435)
..||++.. +....... .++.+.+.+++.+ .++ ............. +... ...+-.. ..+..||++|--.
T Consensus 12 ~kVYLAGp-~~~~~~~~~~~~~i~~~l~~~G-~V~--~~~~~~p~~~~~g~~~~~~-~~~i~~~d~~~i~~aD~vva~~~ 86 (165)
T 2khz_A 12 CSVYFCGS-IRGGREDQALYARIVSRLRRYG-KVL--TEHVADAELEPLGEEAAGG-DQFIHEQDLNWLQQADVVVAEVT 86 (165)
T ss_dssp CEEEEECC-CSSCSHHHHHHHHHHHHHHHHS-EES--GGGTTTTSSSCCSTTSTTC-HHHHHHHHHHHHHHCSEEEEECS
T ss_pred eEEEEECC-CCCcHHHHHHHHHHHHHHHhcC-Ccc--cccccCchhhccccccccC-HHHHHHHHHHHHHhCCEEEEECC
Confidence 47898844 33333333 5677888888888 554 2111101111110 0000 0001111 2289999998766
Q ss_pred --CchHHHHH---HHhCCCEEeecCCCC-hhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHh
Q 013835 315 --GAGTTAAG---LRAACPTTIVPFFGD-QPFWGERVHARGVGPPPIPVDEFSLPKLINAINFM 372 (435)
Q Consensus 315 --G~~s~~Ea---l~~G~P~l~~P~~~d-Q~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~l 372 (435)
..|+..|. .+.|+|++++-...+ ...|+- ++..... ..+.....+.+++.+.|.+.
T Consensus 87 ~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M-~~g~~~~-~~~~~~~y~~~el~~~l~~~ 148 (165)
T 2khz_A 87 QPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAM-IRGAADG-SRFQVWDYAEGEVETMLDRY 148 (165)
T ss_dssp SCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHH-HHHTCCS-SSEEEEECCTTTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhh-hcccCcc-ceeEEEecCHHHHHHHHHHH
Confidence 46898885 788999999832222 333443 4332221 12222122445665555554
No 70
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=73.45 E-value=3.6 Score=32.16 Aligned_cols=127 Identities=13% Similarity=0.141 Sum_probs=65.1
Q ss_pred CcEEEeeCCCCC-CChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCC--CChhhh--cccccEEEEeC-
Q 013835 241 KPIYIGFGSLPV-QEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDN--IPHDWL--FLQCKAVVHHG- 314 (435)
Q Consensus 241 ~~v~v~~Gs~~~-~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~--~p~~~~--l~~~~l~I~hg- 314 (435)
..||++ |++.. ......++.+.+.+++.+ .++ . -+-....+.+..+.. ...| +=..++ +.+||++|--.
T Consensus 3 mkIYlA-GP~f~~~e~~~~~~~i~~~L~~~G-~Vl-~-~hv~~~~l~~~g~~~-~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 3 RSVYFC-GSIRGGREDQALYARIVSRLRRYG-KVL-T-EHVADAELEPLGEEA-AGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp CEEEEE-CCSTTCCTTHHHHHHHHHHHTTTS-EEC-C-CC--------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred ceEEEE-CCCCCcHHHHHHHHHHHHHHHHcC-ccc-c-cccCchhhhhccccc-cCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 468887 45543 333367788999998888 432 1 111111111110000 0111 111222 89999999765
Q ss_pred --CchHHHH---HHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 315 --GAGTTAA---GLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 315 --G~~s~~E---al~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
..||..| |.+.|+|++++-.......-+..+....-|- .+...+...++|.+-|.+.+
T Consensus 78 ~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~-~~~~~~Y~~~el~~il~~f~ 140 (152)
T 4fyk_A 78 QPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGS-RFQVWDYAEGEVETMLDRYF 140 (152)
T ss_dssp SCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSS-SEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCC-eEEEEEecHHHHHHHHHHHH
Confidence 3588777 5889999999753222222334444443321 33322222377777777765
No 71
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=73.07 E-value=8.7 Score=29.67 Aligned_cols=86 Identities=17% Similarity=0.295 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEccccccCCCCCCCCCchhhHHHHHHHHHHHHHhhccCCCccCC
Q 013835 12 PFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKEIIYSLLPACRDPDLDSG 91 (435)
Q Consensus 12 p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
-+..+|+.|.+.|+++ +.|.+ -.+.+++.|+++..+....+.+ ..... +.+... +
T Consensus 38 ~l~~~a~~l~~lGf~i-~AT~G-Ta~~L~~~Gi~v~~v~k~~egg----~~~~~----~~i~d~---------------i 92 (143)
T 2yvq_A 38 RFLGVAEQLHNEGFKL-FATEA-TSDWLNANNVPATPVAWPSQEG----QNPSL----SSIRKL---------------I 92 (143)
T ss_dssp HHHHHHHHHHTTTCEE-EEEHH-HHHHHHHTTCCCEEECCGGGC---------C----BCHHHH---------------H
T ss_pred HHHHHHHHHHHCCCEE-EECch-HHHHHHHcCCeEEEEEeccCCC----ccccc----ccHHHH---------------H
Confidence 3788999999999974 34443 3467788999888875211110 00000 112221 2
Q ss_pred cccCcCEEEeCCcc--------hhHHHHHHHcCCCEEEe
Q 013835 92 IAFKADAIIANPPA--------YGHVHVAEALKIPIHIF 122 (435)
Q Consensus 92 ~~~~pDlVi~d~~~--------~~~~~~A~~~~iP~v~~ 122 (435)
++.+.|+||..+.. +.-.-+|-.++||+++.
T Consensus 93 ~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 93 RDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp HTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred HCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 23388999985432 22345788899999873
No 72
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=73.01 E-value=38 Score=28.16 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=23.3
Q ss_pred CcCEEE-eCCcc-hhHHHHHHHcCCCEEEeeccC
Q 013835 95 KADAII-ANPPA-YGHVHVAEALKIPIHIFFTMP 126 (435)
Q Consensus 95 ~pDlVi-~d~~~-~~~~~~A~~~~iP~v~~~~~~ 126 (435)
.||+|| .|+.. ..++.=|.++|||+|.+.-+.
T Consensus 149 ~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 149 LPDALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp CCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred CCCeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 699986 46543 345677899999999987443
No 73
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=70.62 E-value=20 Score=30.11 Aligned_cols=86 Identities=12% Similarity=0.074 Sum_probs=58.4
Q ss_pred chHHHHHHHcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhccccc
Q 013835 229 PESLVKWLEAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCK 308 (435)
Q Consensus 229 ~~~l~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 308 (435)
.+.+.+|+...+++++|..|+.. ...+..++.+.++|++.+..+.++.-. + ...+.+..+|
T Consensus 21 ~~~l~~~~~~~~~i~iI~~a~~~-~~~~~~~~~~~~al~~lG~~~~~v~~~----------~--------d~~~~l~~ad 81 (229)
T 1fy2_A 21 LPLIANQLNGRRSAVFIPFAGVT-QTWDEYTDKTAEVLAPLGVNVTGIHRV----------A--------DPLAAIEKAE 81 (229)
T ss_dssp HHHHHHHHTTCCEEEEECTTCCS-SCHHHHHHHHHHHHGGGTCEEEETTSS----------S--------CHHHHHHHCS
T ss_pred HHHHHHHhcCCCeEEEEECCCCC-CCHHHHHHHHHHHHHHCCCEEEEEecc----------c--------cHHHHHhcCC
Confidence 34567777644568899988742 236667788899999988876643210 0 0124467889
Q ss_pred EEEEeCCc--------------hHHHHHHHhCCCEEeec
Q 013835 309 AVVHHGGA--------------GTTAAGLRAACPTTIVP 333 (435)
Q Consensus 309 l~I~hgG~--------------~s~~Eal~~G~P~l~~P 333 (435)
.++--||. ..+.|++..|+|++.+-
T Consensus 82 ~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~s 120 (229)
T 1fy2_A 82 IIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWS 120 (229)
T ss_dssp EEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEET
T ss_pred EEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEEC
Confidence 88888885 23566777899999875
No 74
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=69.84 E-value=5.2 Score=34.57 Aligned_cols=54 Identities=15% Similarity=0.213 Sum_probs=41.8
Q ss_pred cccccEEEEeCCchHHHHHHHh---CCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcC
Q 013835 304 FLQCKAVVHHGGAGTTAAGLRA---ACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLD 374 (435)
Q Consensus 304 l~~~~l~I~hgG~~s~~Eal~~---G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll~ 374 (435)
-..+|++|+-||=||+++++.. ++|++.++... +|. +. ++.++++.++++.+++
T Consensus 39 ~~~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G~-------------~Gf--l~--~~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 39 RVTADLIVVVGGDGTVLKAAKKAADGTPMVGFKAGR-------------LGF--LT--SYTLDEIDRFLEDLRN 95 (258)
T ss_dssp CBCCSEEEEEECHHHHHHHHTTBCTTCEEEEEESSS-------------CCS--SC--CBCGGGHHHHHHHHHT
T ss_pred cCCCCEEEEEeCcHHHHHHHHHhCCCCCEEEEECCC-------------CCc--cC--cCCHHHHHHHHHHHHc
Confidence 3578999999999999999887 89999998421 353 22 3467889999988873
No 75
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=69.64 E-value=50 Score=28.20 Aligned_cols=31 Identities=29% Similarity=0.307 Sum_probs=23.4
Q ss_pred CcCEEEe-CCcc-hhHHHHHHHcCCCEEEeecc
Q 013835 95 KADAIIA-NPPA-YGHVHVAEALKIPIHIFFTM 125 (435)
Q Consensus 95 ~pDlVi~-d~~~-~~~~~~A~~~~iP~v~~~~~ 125 (435)
.||+||+ |+.. ..++.=|.++|||+|.+.-+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 7999975 6532 34577899999999998643
No 76
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=67.77 E-value=13 Score=35.10 Aligned_cols=26 Identities=27% Similarity=0.303 Sum_probs=21.8
Q ss_pred cCcCEEEeCCcchhHHHHHHHcCCCEEEe
Q 013835 94 FKADAIIANPPAYGHVHVAEALKIPIHIF 122 (435)
Q Consensus 94 ~~pDlVi~d~~~~~~~~~A~~~~iP~v~~ 122 (435)
.+||++|.+... ..+|+++|||++.+
T Consensus 374 ~~pDllig~~~~---~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 374 GQAQLVIGNSHA---LASARRLGVPLLRA 399 (458)
T ss_dssp HTCSEEEECTTH---HHHHHHTTCCEEEC
T ss_pred cCCCEEEEChhH---HHHHHHcCCCEEEe
Confidence 389999998653 67999999999875
No 77
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=66.73 E-value=9.2 Score=33.34 Aligned_cols=22 Identities=9% Similarity=0.028 Sum_probs=18.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCc
Q 013835 13 FVAIGKRLQDYGHRVRLATHSNF 35 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~~ 35 (435)
..+|+++|++.| +|+++++..-
T Consensus 16 i~aL~~aL~~~g-~V~VVAP~~~ 37 (280)
T 1l5x_A 16 LRLLYQFALSLG-DVDVVAPESP 37 (280)
T ss_dssp HHHHHHHHGGGS-EEEEEEESSC
T ss_pred HHHHHHHHHhCC-CEEEEecCCC
Confidence 678899999888 9999987653
No 78
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=66.70 E-value=28 Score=31.34 Aligned_cols=28 Identities=25% Similarity=0.517 Sum_probs=20.8
Q ss_pred CcCEEEeCCcchhHHHHHHHcCCCEEEeec
Q 013835 95 KADAIIANPPAYGHVHVAEALKIPIHIFFT 124 (435)
Q Consensus 95 ~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~ 124 (435)
+-|++|+.- .+.+.+|..+|+|+|+++.
T Consensus 261 ~a~~~i~~D--sG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 261 RCNLLITND--SGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp TCSEEEEES--SHHHHHHHTTTCCEEEECS
T ss_pred hCCEEEECC--CCHHHHHHhcCCCEEEEEC
Confidence 569998731 3346789999999999863
No 79
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=65.91 E-value=23 Score=33.79 Aligned_cols=27 Identities=15% Similarity=0.289 Sum_probs=20.0
Q ss_pred CcCEEEeCCcc---hhHHHHHHHcCCCEEE
Q 013835 95 KADAIIANPPA---YGHVHVAEALKIPIHI 121 (435)
Q Consensus 95 ~pDlVi~d~~~---~~~~~~A~~~~iP~v~ 121 (435)
.+|+||..+-. .+-+..|+..|||++.
T Consensus 81 ~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~ 110 (494)
T 4hv4_A 81 DASVVVVSTAISADNPEIVAAREARIPVIR 110 (494)
T ss_dssp TCSEEEECTTSCTTCHHHHHHHHTTCCEEE
T ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCEEc
Confidence 57999987433 3446778999999876
No 80
>3e35_A Uncharacterized protein SCO1997; alpha/beta/alpha structure, actinobacteria-specific protein, conserved protein, unknown function; 2.20A {Streptomyces coelicolor}
Probab=64.95 E-value=30 Score=30.82 Aligned_cols=165 Identities=13% Similarity=0.078 Sum_probs=73.6
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEE----EeCCc
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVV----HHGGA 316 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I----~hgG~ 316 (435)
+++++ .|-.-....+.+.+.+++..++.+.+-+++.++-....-...|-.|..... ..++++..+... .-+|.
T Consensus 106 ~~llL-~G~eP~~~w~~f~~avl~~a~~~gV~~vv~Lggip~~vpHtRP~~V~~~at--~~el~~~~~~~~~~~~gp~Gi 182 (325)
T 3e35_A 106 PFLFL-SGPEPDVEWERFAAAVGQIVERLGVRLSVSFHGIPMGVPHTRPVGITPHGS--RTDLVPGHRSPFEEAQVPGSA 182 (325)
T ss_dssp EEEEE-EEECCSSCHHHHHHHHHHHHHHTTEEEEEEEEEEEESCCTTSCCCEEEEES--CGGGCC-----CCCCCCCCCH
T ss_pred cEEEE-ECCCCcchHHHHHHHHHHHHHHcCCCEEEEEeCccCCCCCCCCceeEEEeC--CHHHHHhhccccccCCCcccH
Confidence 34444 455555566778888888888999998888765432211122333433332 233322222111 23343
Q ss_pred h--HHHHHHHhCCCEEee----cC---CCChhhHHH-HHHHc--CCCCCCCC--CCCC--CHHHHHHHHHHhc-C--HHH
Q 013835 317 G--TTAAGLRAACPTTIV----PF---FGDQPFWGE-RVHAR--GVGPPPIP--VDEF--SLPKLINAINFML-D--PKV 377 (435)
Q Consensus 317 ~--s~~Eal~~G~P~l~~----P~---~~dQ~~na~-~v~~~--g~G~~~l~--~~~~--~~~~l~~~i~~ll-~--~~~ 377 (435)
. ...++...|.|.+++ |. ....+.-|. .++.. =.|+ .++ .+++ ..+++.+.|.++. + ++.
T Consensus 183 ~glL~~~~~~~Gi~a~~l~~~vPhYla~~p~P~AA~alL~~L~~~~gl-~vp~~~~~L~e~Ae~~e~~i~el~~~~~~E~ 261 (325)
T 3e35_A 183 EALVEYRLAQAGHDVLGVAAHVPHYVARSAYPDAALTVLEAITAATGL-VLPGIAHSLRTDAHRTQTEIDRQIQEGDEEL 261 (325)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHCCCCeEEEEEEcCccccCCCCHHHHHHHHHHHHHHhCC-CCCcchHHHHHHHHHHHHHHHHHHhccCHHH
Confidence 3 456678899999986 43 122233333 33322 2444 344 3222 3456666666665 3 555
Q ss_pred HHHHHHHHHHhhcc----------------CcHHHHHHHHHHhccccC
Q 013835 378 KERAVELAEAMEKE----------------DGVTGAVKAFFKHYSRSK 409 (435)
Q Consensus 378 ~~~~~~~~~~~~~~----------------~~~~~~~~~i~~~l~~~~ 409 (435)
.+-.+.+-++.-.. ...+.++..+|++|++.+
T Consensus 262 ~~~V~~LE~~yD~~~~~~~~~~~l~~~~~~ps~del~~efErfL~~~~ 309 (325)
T 3e35_A 262 IALVQGLEHQYDAAAGAETRGNMLAEPVEIPSADEIGREFERFLAERE 309 (325)
T ss_dssp HHHHHHHHHHHHHCC---------------------------------
T ss_pred HHHHHHHHHHHhhhhhhccccccccccCCCCCHHHHHHHHHHHHHhcC
Confidence 55555544443221 235778888999998754
No 81
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=63.97 E-value=57 Score=26.42 Aligned_cols=96 Identities=13% Similarity=0.012 Sum_probs=50.7
Q ss_pred HHHHHcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCC-CCCCCC-CCCCceEEcCCC-Chhhh-ccccc
Q 013835 233 VKWLEAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWG-GLGNLA-EPKDSIYLLDNI-PHDWL-FLQCK 308 (435)
Q Consensus 233 ~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~-~~~~~~-~~~~~v~~~~~~-p~~~~-l~~~~ 308 (435)
-+++. .....+|+.|... .+.+.+.++..+.+-+++=+.... ...+.. ..-+...+++.. ..+.+ ...+|
T Consensus 37 g~~la-~~g~~lv~GGG~~-----GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~~~~~i~~~~~~~Rk~~m~~~sd 110 (189)
T 3sbx_A 37 GAAIA-ARGWTLVWGGGHV-----SAMGAVSSAARAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVMEDRAN 110 (189)
T ss_dssp HHHHH-HTTCEEEECCBCS-----HHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCTTCSEEEEESSHHHHHHHHHHHCS
T ss_pred HHHHH-HCCCEEEECCCcc-----CHHHHHHHHHHHcCCcEEEEcCchhhhcccCCCCCCeeEEcCCHHHHHHHHHHHCC
Confidence 34443 3456677765431 134555566555555544332221 111111 122344445543 33333 68888
Q ss_pred EEEE-eCCchHHHHHHH---------hCCCEEeecC
Q 013835 309 AVVH-HGGAGTTAAGLR---------AACPTTIVPF 334 (435)
Q Consensus 309 l~I~-hgG~~s~~Eal~---------~G~P~l~~P~ 334 (435)
.||. .||.||+-|... +++|++++-.
T Consensus 111 a~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 111 AFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 7765 567899888752 5899999853
No 82
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=62.20 E-value=41 Score=32.34 Aligned_cols=73 Identities=8% Similarity=-0.002 Sum_probs=46.3
Q ss_pred HHHHHHHHHHCCCeEEEEeC---CCcHHHHHhcCceeEEccccccCCCCCCCCCchhhHHHHHHHHHHHHHhhccCCCcc
Q 013835 13 FVAIGKRLQDYGHRVRLATH---SNFKDFVLTAGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKEIIYSLLPACRDPDLD 89 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~---~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
|..+|+.|.++|++|+..=. +...+.+++.|+++..=. .+..+
T Consensus 32 ms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~----------~~~~~------------------------ 77 (524)
T 3hn7_A 32 MGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGY----------LIAHL------------------------ 77 (524)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESC----------CGGGG------------------------
T ss_pred HHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCC----------CHHHc------------------------
Confidence 66789999999999988722 223455667787764311 00000
Q ss_pred CCcccCcCEEEeCCcc---hhHHHHHHHcCCCEEEe
Q 013835 90 SGIAFKADAIIANPPA---YGHVHVAEALKIPIHIF 122 (435)
Q Consensus 90 ~~~~~~pDlVi~d~~~---~~~~~~A~~~~iP~v~~ 122 (435)
...+|+||..+.. .+.+..|+..|||++.-
T Consensus 78 ---~~~~d~vV~Spgi~~~~p~l~~a~~~gi~v~~~ 110 (524)
T 3hn7_A 78 ---QPAPDLVVVGNAMKRGMDVIEYMLDTGLRYTSG 110 (524)
T ss_dssp ---CSCCSEEEECTTCCTTSHHHHHHHHHTCCEEEH
T ss_pred ---CCCCCEEEECCCcCCCCHHHHHHHHCCCcEEEH
Confidence 0157999987433 34467788899999863
No 83
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=61.29 E-value=14 Score=30.19 Aligned_cols=42 Identities=5% Similarity=-0.032 Sum_probs=28.4
Q ss_pred cchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEcc
Q 013835 8 GDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLD 50 (435)
Q Consensus 8 GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~ 50 (435)
|.+.-..++|+.+ ..|.+|.+..+....-.-+..+++++.++
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRGgta~~lr~~~~iPVV~I~ 77 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRGATSDYIKKSVSIPSISIK 77 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEHHHHHHHHTTCSSCEEEEC
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECChHHHHHHHhCCCCEEEEc
Confidence 4556678889999 88999766655443333333578888876
No 84
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=61.14 E-value=61 Score=28.79 Aligned_cols=28 Identities=36% Similarity=0.577 Sum_probs=20.8
Q ss_pred CcCEEEeCCcchhHHHHHHHcCCCEEEeec
Q 013835 95 KADAIIANPPAYGHVHVAEALKIPIHIFFT 124 (435)
Q Consensus 95 ~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~ 124 (435)
+-|++|+.- .+.+.+|..+|+|+|.++.
T Consensus 261 ~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 261 ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 569999742 3446678889999999864
No 85
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=61.06 E-value=8.9 Score=28.13 Aligned_cols=65 Identities=15% Similarity=0.073 Sum_probs=46.0
Q ss_pred cccccEEEEeCCchH---------HHHHHHhCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcC
Q 013835 304 FLQCKAVVHHGGAGT---------TAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLD 374 (435)
Q Consensus 304 l~~~~l~I~hgG~~s---------~~Eal~~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll~ 374 (435)
++.++++|--.|..| +..|...|+|++++=-.+.+ .-...+++.+..+ + ..+.+.+.++|+..+|
T Consensus 36 I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~-~~P~~l~~~a~~i-V----~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 36 PEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLE-NVPPELEAVSSEV-V----GWNPHCIRDALEDALD 109 (111)
T ss_dssp SSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSS-CCCTTHHHHCSEE-E----CSCHHHHHHHHHHHHC
T ss_pred cccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCC-cCCHHHHhhCcee-c----cCCHHHHHHHHHhccC
Confidence 588999999999877 77788899999998434333 1223366555432 1 2378999999988653
No 86
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=60.35 E-value=4.2 Score=39.45 Aligned_cols=27 Identities=26% Similarity=0.410 Sum_probs=21.5
Q ss_pred CCccchhHHHHHHHHHHHCCCeEEEEeCC
Q 013835 5 GTRGDVQPFVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 5 ~~~GH~~p~~~la~~L~~rGh~V~~~~~~ 33 (435)
||.|. -+.+|+++|+++||+|+++++.
T Consensus 26 GGLad--vv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 26 GGLGD--VLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp SHHHH--HHHHHHHHHHTTTCEEEEEEEC
T ss_pred CcHHH--HHHHHHHHHHHcCCeEEEEecC
Confidence 44444 4678999999999999999854
No 87
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=60.23 E-value=28 Score=32.60 Aligned_cols=48 Identities=10% Similarity=0.231 Sum_probs=35.3
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHH--------HHHhcCceeEEc
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKD--------FVLTAGLEFYPL 49 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~--------~~~~~g~~~~~i 49 (435)
+..++.|=...+..||..|+++|++|.+++.+.++. .....|++++..
T Consensus 106 vG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~gvpv~~~ 161 (443)
T 3dm5_A 106 VGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGN 161 (443)
T ss_dssp ECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGTCEEECC
T ss_pred ECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhcCCcEEec
Confidence 345788889999999999999999999998664422 223456666554
No 88
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=58.90 E-value=34 Score=31.08 Aligned_cols=27 Identities=30% Similarity=0.410 Sum_probs=21.2
Q ss_pred CccchhHHHHHHHHHHHCCCeEEEEeCC
Q 013835 6 TRGDVQPFVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 6 ~~GH~~p~~~la~~L~~rGh~V~~~~~~ 33 (435)
+.|-..-+.+|+++|.++| +|.+.+..
T Consensus 49 s~G~~~~~~~L~~~L~~~~-~v~v~~~~ 75 (374)
T 2xci_A 49 SIGEFNTFLPILKELKREH-RILLTYFS 75 (374)
T ss_dssp SHHHHHHHHHHHHHHHHHS-CEEEEESC
T ss_pred CHHHHHHHHHHHHHHHhcC-CEEEEEcC
Confidence 4466777889999999999 89877643
No 89
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=58.24 E-value=20 Score=30.04 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=25.1
Q ss_pred CcccCCccchhHHHHHH------HHHHHCC-CeEEEEeCCC
Q 013835 1 MLIVGTRGDVQPFVAIG------KRLQDYG-HRVRLATHSN 34 (435)
Q Consensus 1 ~~~~~~~GH~~p~~~la------~~L~~rG-h~V~~~~~~~ 34 (435)
|++.|+.+.++.++..+ ++|.+.| .+|++.+...
T Consensus 32 lVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~ 72 (224)
T 2jzc_A 32 FVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRN 72 (224)
T ss_dssp EEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSS
T ss_pred EEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCC
Confidence 46778887678877655 8888888 6888887643
No 90
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=56.92 E-value=50 Score=25.94 Aligned_cols=81 Identities=15% Similarity=0.110 Sum_probs=48.0
Q ss_pred EEEeeCCCCCCCh-HHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhh--cccccEEEEe-----C
Q 013835 243 IYIGFGSLPVQEP-EKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWL--FLQCKAVVHH-----G 314 (435)
Q Consensus 243 v~v~~Gs~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~--l~~~~l~I~h-----g 314 (435)
+|...|.++.... ....+.+.+.+++.+..++. +.+ +. .+ ....+-+.++ +..||++|-- |
T Consensus 12 ~~y~a~~~F~~~e~~~~~~~l~~~l~~~G~~v~~---P~~-~~---~~----~~~~i~~~d~~~i~~aD~vVA~ldpf~g 80 (161)
T 2f62_A 12 IYIAGPAVFNPDMGASYYNKVRELLKKENVMPLI---PTD-NE---AT----EALDIRQKNIQMIKDCDAVIADLSPFRG 80 (161)
T ss_dssp EEEESGGGGSTTTTHHHHHHHHHHHHTTTCEEEC---TTT-TC---CS----SHHHHHHHHHHHHHHCSEEEEECCCCSS
T ss_pred eEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEC---CCc-cC---cc----hHHHHHHHHHHHHHhCCEEEEEecCCCC
Confidence 3334444544455 66778888888887765432 221 11 11 0111222223 8999999876 2
Q ss_pred ---CchHHHHH---HHhCCCEEeecC
Q 013835 315 ---GAGTTAAG---LRAACPTTIVPF 334 (435)
Q Consensus 315 ---G~~s~~Ea---l~~G~P~l~~P~ 334 (435)
-.||..|. .+.|||++++-.
T Consensus 81 ~~~D~GTafEiGyA~AlgKPVi~l~~ 106 (161)
T 2f62_A 81 HEPDCGTAFEVGCAAALNKMVLTFTS 106 (161)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCcHHHHHHHHHHCCCEEEEEEc
Confidence 25888885 789999999853
No 91
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=56.70 E-value=50 Score=25.86 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=37.7
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeCC----CcHHHHHhcCceeEEcc
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATHS----NFKDFVLTAGLEFYPLD 50 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~----~~~~~~~~~g~~~~~i~ 50 (435)
.+.++-+|-....-++..|...|++|.++... .+.+.+.+.+...+.+.
T Consensus 24 a~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS 76 (161)
T 2yxb_A 24 AKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVS 76 (161)
T ss_dssp EEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEE
T ss_pred EeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEE
Confidence 35677889999999999999999999988532 34455666777777775
No 92
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=54.10 E-value=8.5 Score=34.20 Aligned_cols=54 Identities=19% Similarity=0.218 Sum_probs=38.2
Q ss_pred hcccccEEEEeCCchHHHHHHHh----CCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 303 LFLQCKAVVHHGGAGTTAAGLRA----ACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 303 ~l~~~~l~I~hgG~~s~~Eal~~----G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
....+|++|.-||=||+++++.. ++|++.++... +|. +. ++.++++.+++..++
T Consensus 72 ~~~~~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~-------------~gf--l~--~~~~~~~~~~~~~i~ 129 (307)
T 1u0t_A 72 AADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGR-------------IGF--LA--EAEAEAIDAVLEHVV 129 (307)
T ss_dssp ----CCCEEEEECHHHHHHHHHHHHHHTCCEEEEECSS-------------CCS--SC--SEEGGGHHHHHHHHH
T ss_pred cccCCCEEEEEeCCHHHHHHHHHhccCCCCEEEEeCCC-------------Ccc--Cc--ccCHHHHHHHHHHHH
Confidence 45678999999999999999754 89999998431 343 22 235678888888876
No 93
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=53.80 E-value=4.3 Score=37.89 Aligned_cols=24 Identities=4% Similarity=0.110 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCC
Q 013835 11 QPFVAIGKRLQDYGHRVRLATHSN 34 (435)
Q Consensus 11 ~p~~~la~~L~~rGh~V~~~~~~~ 34 (435)
+.+..+|++|+++||+|++++...
T Consensus 66 ~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 66 STALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp HHHHHHHTTSCTTTCEEEEEESSC
T ss_pred HHHHHHHHHHHHcCCceEEEEecC
Confidence 568999999999999999998753
No 94
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=53.59 E-value=9.9 Score=33.41 Aligned_cols=93 Identities=13% Similarity=0.127 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEEEeCCchHHHHHHHh----CCCEEee
Q 013835 257 KMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVHHGGAGTTAAGLRA----ACPTTIV 332 (435)
Q Consensus 257 ~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~hgG~~s~~Eal~~----G~P~l~~ 332 (435)
+.++.+.+.+++.+..+.+...... .+. .++ . ........-..+|++|.-||=||+++++.. ++|++.+
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~~~--~~~-~~~-~---~~~~~~~~~~~~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI 93 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQIAH--ELQ-LKN-V---PTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGI 93 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHHHH--HTT-CSS-C---CEECHHHHHHHCSEEEECSCHHHHHHHHHHHTTSSCEEEEB
T ss_pred HHHHHHHHHHHHCCCEEEEecchhh--hcc-ccc-c---cccchhhcccCCCEEEEEcCcHHHHHHHHHhhcCCCCEEEE
Confidence 3456677778887887765431100 000 000 0 011223345678999999999999999853 7899988
Q ss_pred cCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 333 PFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 333 P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
+.. -+|. +. ++.++++.+++..++
T Consensus 94 ~~G-------------t~gf--la--~~~~~~~~~al~~i~ 117 (292)
T 2an1_A 94 NRG-------------NLGF--LT--DLDPDNALQQLSDVL 117 (292)
T ss_dssp CSS-------------SCCS--SC--CBCTTSHHHHHHHHH
T ss_pred ECC-------------Cccc--CC--cCCHHHHHHHHHHHH
Confidence 732 1342 21 123567777887776
No 95
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=53.41 E-value=8.8 Score=35.59 Aligned_cols=20 Identities=20% Similarity=0.165 Sum_probs=15.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCC
Q 013835 13 FVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~ 33 (435)
...+++.|+++| +|++++..
T Consensus 33 ~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 33 IHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp HHHHHHHHHHHS-CEEEEECS
T ss_pred HhHHHHHHHhCC-ceEEEEec
Confidence 345788899999 99999643
No 96
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=51.31 E-value=24 Score=29.19 Aligned_cols=32 Identities=22% Similarity=-0.004 Sum_probs=23.8
Q ss_pred HHHHhCCCEEeecCC----CChhhHHHHHHHcCCCC
Q 013835 321 AGLRAACPTTIVPFF----GDQPFWGERVHARGVGP 352 (435)
Q Consensus 321 Eal~~G~P~l~~P~~----~dQ~~na~~v~~~g~G~ 352 (435)
.++..++|++++|.. .....|-..+.+.|+=+
T Consensus 116 ~~L~~~~plvlaPamn~~m~~h~~Nm~~L~~~G~~i 151 (207)
T 3mcu_A 116 ATLRNGKPVVLAVSTNDALGLNGVNLMRLMATKNIY 151 (207)
T ss_dssp HHHHTTCCEEEEEEETTTTTTTHHHHHHHHHBTTEE
T ss_pred HHHhcCCCEEEEECCChhHHHHHHHHHHHHHCCCEE
Confidence 467889999999842 23357888888888653
No 97
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=50.31 E-value=97 Score=25.31 Aligned_cols=109 Identities=12% Similarity=-0.075 Sum_probs=56.9
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCC-------------CCceEEcCCCChhhh--c
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEP-------------KDSIYLLDNIPHDWL--F 304 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~--l 304 (435)
+++++.-.|+.... ++..+ +++.+.+.+..+-++........+... .++-.+.++.....+ -
T Consensus 8 k~I~lgiTGs~aa~--~k~~~-ll~~L~~~g~eV~vv~T~~A~~~i~~~~~~~~~~~~l~~l~g~~v~~~~~~~~hi~~s 84 (201)
T 3lqk_A 8 KHVGFGLTGSHCTY--HEVLP-QMERLVELGAKVTPFVTHTVQTTDTKFGESSEWINKIKQITEEPIVDSMVKAEPFGPK 84 (201)
T ss_dssp CEEEEECCSCGGGG--GGTHH-HHHHHHHTTCEEEEECSSCSCCTTCCTTCSCHHHHHHHHHCCSCCBCSHHHHGGGTTT
T ss_pred CEEEEEEEChHHHH--HHHHH-HHHHHhhCCCEEEEEEChhHHHHHHHhhchhHHHHHHHHHhCCCeEeecCcccccccc
Confidence 44666666775433 01222 566666677766655544332211111 111111111111222 3
Q ss_pred ccccE-EEEeCCchHH----------------HHHHHhCCCEEeecCC----CChhhHHHHHHHcCCC
Q 013835 305 LQCKA-VVHHGGAGTT----------------AAGLRAACPTTIVPFF----GDQPFWGERVHARGVG 351 (435)
Q Consensus 305 ~~~~l-~I~hgG~~s~----------------~Eal~~G~P~l~~P~~----~dQ~~na~~v~~~g~G 351 (435)
..+|+ +|.-|-+||+ ..++..++|++++|.. .....|-..+.+.|+=
T Consensus 85 ~~aD~mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~G~~ 152 (201)
T 3lqk_A 85 TPLDCMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMATKNI 152 (201)
T ss_dssp SCCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHTSTTE
T ss_pred cccCEEEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHHCCCE
Confidence 56775 4555655442 2335579999999843 4566699999888865
No 98
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=49.63 E-value=22 Score=28.06 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=24.3
Q ss_pred cccccEEEE--eCC---chHHHH---HHHhCCCEEeec
Q 013835 304 FLQCKAVVH--HGG---AGTTAA---GLRAACPTTIVP 333 (435)
Q Consensus 304 l~~~~l~I~--hgG---~~s~~E---al~~G~P~l~~P 333 (435)
+..||++|- .|. .||..| |.+.|+|++++-
T Consensus 67 i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~ 104 (162)
T 3ehd_A 67 VLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALY 104 (162)
T ss_dssp HHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 899999887 333 688887 588999999984
No 99
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=48.86 E-value=65 Score=27.08 Aligned_cols=55 Identities=16% Similarity=0.189 Sum_probs=36.3
Q ss_pred HHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhh-------cccccEEEEeCCc
Q 013835 260 QIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWL-------FLQCKAVVHHGGA 316 (435)
Q Consensus 260 ~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~-------l~~~~l~I~hgG~ 316 (435)
..+.+++...|..++++.++..... ..+.++.+.+.-.-.++ +..+|++|+..+-
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~~~~~~--~~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAAv 94 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTKRALKP--EPHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAV 94 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECTTSCCC--CCCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSBC
T ss_pred HHHHHHHHHCCCEEEEEeCCccccc--cCCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCcc
Confidence 4478888889999998887543211 12456666666544333 4678999988874
No 100
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=48.37 E-value=16 Score=28.08 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcC
Q 013835 10 VQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAG 43 (435)
Q Consensus 10 ~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g 43 (435)
+--.+-++..|+++||+|++.+.+.....++.+.
T Consensus 22 ~p~~lYl~~~Lk~~G~~v~VA~npAAlkLlevaD 55 (157)
T 1kjn_A 22 IPLAIYTSHKLKKKGFRVTVTANPAALRLVQVAD 55 (157)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHhcCCeeEEecCHHHHhheeccC
Confidence 3446778999999999999999887777766543
No 101
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=48.08 E-value=46 Score=29.23 Aligned_cols=81 Identities=11% Similarity=-0.050 Sum_probs=49.2
Q ss_pred cEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEEEeCCchHHHH
Q 013835 242 PIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVHHGGAGTTAA 321 (435)
Q Consensus 242 ~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~hgG~~s~~E 321 (435)
.++++--|. .....+.++.+...++..+..+.+.......+ ..++ -.++....|++|.-||-||+.|
T Consensus 12 ~vi~Np~sG-~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~-a~~~-----------~~~~~~~~d~vv~~GGDGTl~~ 78 (304)
T 3s40_A 12 LLIVNPKAG-QGDLHTNLTKIVPPLAAAFPDLHILHTKEQGD-ATKY-----------CQEFASKVDLIIVFGGDGTVFE 78 (304)
T ss_dssp EEEECTTCS-SSCHHHHHHHHHHHHHHHCSEEEEEECCSTTH-HHHH-----------HHHHTTTCSEEEEEECHHHHHH
T ss_pred EEEECcccC-CCchHHHHHHHHHHHHHcCCeEEEEEccCcch-HHHH-----------HHHhhcCCCEEEEEccchHHHH
Confidence 344554333 22345567778888888887766543221100 0000 0111246799999999999999
Q ss_pred HHH------hCCCEEeecCC
Q 013835 322 GLR------AACPTTIVPFF 335 (435)
Q Consensus 322 al~------~G~P~l~~P~~ 335 (435)
++. .++|+.++|..
T Consensus 79 v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 79 CTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp HHHHHTTCSSCCEEEEEECS
T ss_pred HHHHHhhCCCCCcEEEecCC
Confidence 865 46899999965
No 102
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=47.52 E-value=46 Score=25.22 Aligned_cols=82 Identities=21% Similarity=0.225 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHC--CCeEEEEeCCCcHHHHHh-cCceeEEccccccCCCCCCCCCchhhHHHHHHHHHHHHHhhccCCCc
Q 013835 12 PFVAIGKRLQDY--GHRVRLATHSNFKDFVLT-AGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKEIIYSLLPACRDPDL 88 (435)
Q Consensus 12 p~~~la~~L~~r--Gh~V~~~~~~~~~~~~~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (435)
-++.+|+.|.+. ||++. +|.. -...+++ .|+++..+.. .+ + .-.+.+...+
T Consensus 17 ~~v~~a~~~~~ll~Gf~l~-AT~g-Ta~~L~e~~Gl~v~~v~k---------~~--~-eG~p~I~d~I------------ 70 (134)
T 2xw6_A 17 EMVAFCQRHREVLARFPLV-ATGT-TGRRIEEATGLTVEKLLS---------GP--L-GGDQQMGARV------------ 70 (134)
T ss_dssp HHHHHHHHTHHHHTTSCEE-ECHH-HHHHHHHHHCCCCEECSC---------GG--G-THHHHHHHHH------------
T ss_pred HHHHHHHHHHHHhCCCEEE-EccH-HHHHHHHhhCceEEEEEe---------cC--C-CCcchHHHHH------------
Confidence 478899999998 99653 4443 3456666 8998877641 00 0 0112222222
Q ss_pred cCCcccCcCEEEe--CCcc--------hhHHHHHHHcCCCEEEe
Q 013835 89 DSGIAFKADAIIA--NPPA--------YGHVHVAEALKIPIHIF 122 (435)
Q Consensus 89 ~~~~~~~pDlVi~--d~~~--------~~~~~~A~~~~iP~v~~ 122 (435)
++-+.|+||. |+.. ..-.-+|-.++||+++.
T Consensus 71 ---~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 71 ---AEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp ---HTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred ---HCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 2237899986 3211 22356889999999873
No 103
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=46.90 E-value=18 Score=33.15 Aligned_cols=28 Identities=21% Similarity=0.137 Sum_probs=22.5
Q ss_pred CccchhHHHHHHHHHHHCCCeEEEEeCCC
Q 013835 6 TRGDVQPFVAIGKRLQDYGHRVRLATHSN 34 (435)
Q Consensus 6 ~~GH~~p~~~la~~L~~rGh~V~~~~~~~ 34 (435)
..|.-.-+..|+++|.++ |+|++++...
T Consensus 13 ~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 13 PSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 345566688999999999 9999997544
No 104
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=46.75 E-value=63 Score=28.46 Aligned_cols=28 Identities=21% Similarity=0.296 Sum_probs=20.4
Q ss_pred CcCEEEeCCcchhHHHHHHHcCCCEEEeec
Q 013835 95 KADAIIANPPAYGHVHVAEALKIPIHIFFT 124 (435)
Q Consensus 95 ~pDlVi~d~~~~~~~~~A~~~~iP~v~~~~ 124 (435)
+-|++|+.- .+.+.+|..+|+|+|.++.
T Consensus 253 ~a~l~I~~D--SG~~HlAaa~g~P~v~lfg 280 (326)
T 2gt1_A 253 GAKFVVSVD--TGLSHLTAALDRPNITVYG 280 (326)
T ss_dssp TCSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred hCCEEEecC--CcHHHHHHHcCCCEEEEEC
Confidence 569998742 2335678889999999863
No 105
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=45.23 E-value=17 Score=31.12 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=17.2
Q ss_pred HHHHHHHHHHCCCeEEEEeCCC
Q 013835 13 FVAIGKRLQDYGHRVRLATHSN 34 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~ 34 (435)
..+|+++|.+.| +|+++++..
T Consensus 17 i~~L~~~l~~~g-~V~VvAP~~ 37 (251)
T 2wqk_A 17 INALREALKSLG-RVVVVAPDR 37 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESS
T ss_pred HHHHHHHHHhCC-CEEEEeeCC
Confidence 678899999988 599888754
No 106
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=45.12 E-value=79 Score=26.43 Aligned_cols=53 Identities=13% Similarity=0.018 Sum_probs=33.2
Q ss_pred HHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhh-------cccccEEEEeCCc
Q 013835 260 QIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWL-------FLQCKAVVHHGGA 316 (435)
Q Consensus 260 ~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~-------l~~~~l~I~hgG~ 316 (435)
..+.+.+...|.+++++.+..... .+.++.+.+.-...++ +..+|++|+..|.
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~~~l~----~~~g~~~~dv~~~~~~~~~v~~~~~~~Dili~~Aav 97 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGPVSLP----TPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAV 97 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECSCCCC----CCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBC
T ss_pred HHHHHHHHHCCCEEEEEECCcccc----cCCCCeEEccCcHHHHHHHHHHhcCCCCEEEECCcc
Confidence 447788888999998876543211 2344555554433333 4678888888774
No 107
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=44.84 E-value=69 Score=29.99 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=23.1
Q ss_pred HHHHHHHHCCCeEEEEeCC-----CcHHHHHhcCceeE
Q 013835 15 AIGKRLQDYGHRVRLATHS-----NFKDFVLTAGLEFY 47 (435)
Q Consensus 15 ~la~~L~~rGh~V~~~~~~-----~~~~~~~~~g~~~~ 47 (435)
++|+.|+++||+|+..=.. ...+.+++.|+++.
T Consensus 23 s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~ 60 (451)
T 3lk7_A 23 AAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV 60 (451)
T ss_dssp HHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE
T ss_pred HHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE
Confidence 4699999999999988321 23345666777665
No 108
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=44.19 E-value=99 Score=23.97 Aligned_cols=82 Identities=18% Similarity=0.161 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHC--CCeEEEEeCCCcHHHHHh-cCceeEEccccccCCCCCCCCCchhhHHHHHHHHHHHHHhhccCCCc
Q 013835 12 PFVAIGKRLQDY--GHRVRLATHSNFKDFVLT-AGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKEIIYSLLPACRDPDL 88 (435)
Q Consensus 12 p~~~la~~L~~r--Gh~V~~~~~~~~~~~~~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (435)
-++.+|+.|.+. ||++. +|.+.. ..+++ .|+++..+... +.+ -.+.+...+
T Consensus 25 ~~v~~ak~~~~ll~Gf~l~-AT~gTa-~~L~e~~Gl~v~~v~k~---------~eG---G~p~I~d~I------------ 78 (152)
T 1b93_A 25 MLMSWVERHQPLLEQHVLY-ATGTTG-NLISRATGMNVNAMLSG---------PMG---GDQQVGALI------------ 78 (152)
T ss_dssp HHHHHHHHTHHHHTTSEEE-EETTHH-HHHHHHHCCCCEEECCG---------GGT---HHHHHHHHH------------
T ss_pred HHHHHHHHHHHHhCCCEEE-EccHHH-HHHHHHhCceeEEEEec---------CCC---CCchHHHHH------------
Confidence 378899999998 99653 565543 55666 89988777410 000 112222222
Q ss_pred cCCcccCcCEEEeCCc--ch--------hHHHHHHHcCCCEEEe
Q 013835 89 DSGIAFKADAIIANPP--AY--------GHVHVAEALKIPIHIF 122 (435)
Q Consensus 89 ~~~~~~~pDlVi~d~~--~~--------~~~~~A~~~~iP~v~~ 122 (435)
++-+.|+||..+- .. .-.-+|-.++||+++.
T Consensus 79 ---~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 79 ---SEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp ---HTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred ---HCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeC
Confidence 2238899986322 21 1245789999999873
No 109
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=42.73 E-value=38 Score=26.85 Aligned_cols=92 Identities=13% Similarity=0.050 Sum_probs=48.2
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCC---CCCCCCCc-eEEcCC---CChhhh--cccccEEE
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLG---NLAEPKDS-IYLLDN---IPHDWL--FLQCKAVV 311 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~---~~~~~~~~-v~~~~~---~p~~~~--l~~~~l~I 311 (435)
+.||++.. +.........+.+.+.++..+.-+-+........ ...+.+.. ..-..| +=+.++ +..||++|
T Consensus 8 ~kIYLAGP-~F~~~~~~~~~~~~~~L~~~~~g~~v~~P~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~D~~~i~~aD~vV 86 (167)
T 1s2d_A 8 GKIYLGSP-FYSDAQRERAAKAKELLAKNPSIAHVFFPFDDGFTDPDEKNPEIGGIRSMVWRDATYQNDLTGISNATCGV 86 (167)
T ss_dssp EEEEEECC-CSSHHHHHHHHHHHHHHTTCTTEEEEECTTC-CCCCTTCC-CCTTSCCCHHHHHHHHHHHHHHHHHCSEEE
T ss_pred cEEEEECC-CCCHHHHHHHHHHHHHHHhCCCcCEEECCccccccccccccccccccCChHHHHHHHHHHHHHHHhCCEEE
Confidence 37888865 5443334566667777766643333333221110 01110111 000001 112222 89999998
Q ss_pred E--eC---CchHHHH---HHHhCCCEEeec
Q 013835 312 H--HG---GAGTTAA---GLRAACPTTIVP 333 (435)
Q Consensus 312 ~--hg---G~~s~~E---al~~G~P~l~~P 333 (435)
- .| ..||..| |.+.|+|++++.
T Consensus 87 A~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 87 FLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp EEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred EECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 7 33 3588777 588999999995
No 110
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=41.98 E-value=20 Score=27.24 Aligned_cols=49 Identities=8% Similarity=0.048 Sum_probs=38.3
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeC----CCcHHHHHhcCceeEEcc
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATH----SNFKDFVLTAGLEFYPLD 50 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~----~~~~~~~~~~g~~~~~i~ 50 (435)
.+.++-+|-....-++..|..+|++|..+.. +.+.+.+.+.+...+.+.
T Consensus 9 a~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS 61 (137)
T 1ccw_A 9 GVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVS 61 (137)
T ss_dssp EEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEE
T ss_pred EeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEE
Confidence 3567779999999999999999999998853 334556667788877775
No 111
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=41.86 E-value=45 Score=26.36 Aligned_cols=21 Identities=19% Similarity=0.249 Sum_probs=18.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCC
Q 013835 13 FVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~ 33 (435)
+.++.+.|+++|+.+.++|..
T Consensus 47 ~~e~L~~L~~~G~~l~i~Tn~ 67 (176)
T 2fpr_A 47 VIPQLLKLQKAGYKLVMITNQ 67 (176)
T ss_dssp HHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 678899999999999999875
No 112
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=41.13 E-value=1.1e+02 Score=29.23 Aligned_cols=25 Identities=16% Similarity=0.375 Sum_probs=20.7
Q ss_pred CcCEEEeCCcchhHHHHHHHcCCCEEEe
Q 013835 95 KADAIIANPPAYGHVHVAEALKIPIHIF 122 (435)
Q Consensus 95 ~pDlVi~d~~~~~~~~~A~~~~iP~v~~ 122 (435)
+||++|.+.. ...+|+++|||++.+
T Consensus 349 ~pDL~ig~~~---~~~~a~~~giP~~~i 373 (525)
T 3aek_B 349 APELILGTQM---ERNIAKKLGLPCAVI 373 (525)
T ss_dssp CCSEEEECHH---HHHHHHHHTCCEEEC
T ss_pred CCCEEEecch---hHHHHHHcCCCEEEe
Confidence 8999999853 366889999999874
No 113
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=40.81 E-value=47 Score=26.98 Aligned_cols=17 Identities=6% Similarity=0.139 Sum_probs=13.8
Q ss_pred HHHHHHHcCCCEEEeec
Q 013835 108 HVHVAEALKIPIHIFFT 124 (435)
Q Consensus 108 ~~~~A~~~~iP~v~~~~ 124 (435)
..++|+.+++|++....
T Consensus 77 ~Al~Ak~~~vPf~V~a~ 93 (191)
T 1w2w_B 77 LAVICKQFGIKFFVVAP 93 (191)
T ss_dssp HHHHHHHHTCEEEEECC
T ss_pred HHHHHHHcCCCEEEecc
Confidence 35789999999998754
No 114
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=40.64 E-value=1.5e+02 Score=24.11 Aligned_cols=93 Identities=12% Similarity=0.052 Sum_probs=49.8
Q ss_pred HHHHHHcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEc--CCCC-hhhh-cccc
Q 013835 232 LVKWLEAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLL--DNIP-HDWL-FLQC 307 (435)
Q Consensus 232 l~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~--~~~p-~~~~-l~~~ 307 (435)
+.+++. +....+|+.|... +-....++..+.+-+++-+... . ....+. ....+. ...+ .+.+ ...+
T Consensus 50 lg~~LA-~~G~~vVsGg~~G------iM~aa~~gAl~~GG~~iGVlP~-e-~~~~~~-~~~~~~~~~~f~~Rk~~m~~~s 119 (195)
T 1rcu_A 50 LGRTLA-KKGYLVFNGGRDG------VMELVSQGVREAGGTVVGILPD-E-EAGNPY-LSVAVKTGLDFQMRSFVLLRNA 119 (195)
T ss_dssp HHHHHH-HTTCEEEECCSSH------HHHHHHHHHHHTTCCEEEEEST-T-CCCCTT-CSEEEECCCCHHHHHHHHHTTC
T ss_pred HHHHHH-HCCCEEEeCCHHH------HHHHHHHHHHHcCCcEEEEeCC-c-ccCCCC-cceeeecCCCHHHHHHHHHHhC
Confidence 344454 3456677744322 3344555555555566655533 2 111122 334443 2333 3444 5667
Q ss_pred cEEE-EeCCchHHHH---HHHhCCCEEeecC
Q 013835 308 KAVV-HHGGAGTTAA---GLRAACPTTIVPF 334 (435)
Q Consensus 308 ~l~I-~hgG~~s~~E---al~~G~P~l~~P~ 334 (435)
|.|| --||.||+.| |+.+++|+++++.
T Consensus 120 da~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 120 DVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp SEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred CEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 7555 5667777555 6789999999963
No 115
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=40.40 E-value=1e+02 Score=25.33 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=23.4
Q ss_pred CcCEEEe-CCcc-hhHHHHHHHcCCCEEEeecc
Q 013835 95 KADAIIA-NPPA-YGHVHVAEALKIPIHIFFTM 125 (435)
Q Consensus 95 ~pDlVi~-d~~~-~~~~~~A~~~~iP~v~~~~~ 125 (435)
.||+||+ |+.. ..++.=|.++|||+|.+.-+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 6999975 6533 34567799999999998743
No 116
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=40.31 E-value=50 Score=31.38 Aligned_cols=29 Identities=21% Similarity=0.192 Sum_probs=22.4
Q ss_pred CcccCcCEEEeCCcchhHHHHHHHcCCCEEEe
Q 013835 91 GIAFKADAIIANPPAYGHVHVAEALKIPIHIF 122 (435)
Q Consensus 91 ~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~ 122 (435)
+++.+||++|..... ..+|+++|||++-+
T Consensus 397 i~~~~pDL~ig~~~~---~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 397 VDEYQADILIAGGRN---MYTALKGRVPFLDI 425 (483)
T ss_dssp HHHTTCSEEECCGGG---HHHHHHTTCCBCCC
T ss_pred HHhcCCCEEEECCch---hHHHHHcCCCEEEe
Confidence 334599999997543 56899999999754
No 117
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=40.12 E-value=64 Score=30.08 Aligned_cols=48 Identities=19% Similarity=0.414 Sum_probs=34.7
Q ss_pred ccCCccchhHHHHHHHHHHHC-CCeEEEEeCCCcH----H----HHHhcCceeEEcc
Q 013835 3 IVGTRGDVQPFVAIGKRLQDY-GHRVRLATHSNFK----D----FVLTAGLEFYPLD 50 (435)
Q Consensus 3 ~~~~~GH~~p~~~la~~L~~r-Gh~V~~~~~~~~~----~----~~~~~g~~~~~i~ 50 (435)
..++.|=..-+..||..|+++ |++|.++..+.+. + .....|+.+++.+
T Consensus 107 G~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~~a~~ql~~~~~~~~l~v~~~~ 163 (433)
T 2xxa_A 107 GLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSD 163 (433)
T ss_dssp CSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSSTTHHHHHHHHHHHHTCEECCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCccHHHHHHhhcccCCeeEEeCC
Confidence 456888899999999999999 9999999755432 1 1234566665543
No 118
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=39.90 E-value=1.6e+02 Score=24.29 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHCCC--eEEEE-eCC-C--cHHHHHhcCceeEEcc
Q 013835 12 PFVAIGKRLQDYGH--RVRLA-THS-N--FKDFVLTAGLEFYPLD 50 (435)
Q Consensus 12 p~~~la~~L~~rGh--~V~~~-~~~-~--~~~~~~~~g~~~~~i~ 50 (435)
-+.++.++|.+.+| +|..+ |.. . ..+..++.|++++.++
T Consensus 14 ~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 58 (216)
T 2ywr_A 14 NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQ 58 (216)
T ss_dssp HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeC
Confidence 47788888988888 77555 432 2 3456778899998765
No 119
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=39.28 E-value=1.3e+02 Score=28.26 Aligned_cols=29 Identities=24% Similarity=0.211 Sum_probs=23.0
Q ss_pred CcccCcCEEEeCCcchhHHHHHHHcCCCEEEe
Q 013835 91 GIAFKADAIIANPPAYGHVHVAEALKIPIHIF 122 (435)
Q Consensus 91 ~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~ 122 (435)
+++.+||++|.++.. ..+|++.|+|++.+
T Consensus 381 i~~~~pDl~ig~~~~---~~~a~k~gip~~~~ 409 (458)
T 1mio_B 381 IKNEGVDLLISNTYG---KFIAREENIPFVRF 409 (458)
T ss_dssp HHHSCCSEEEESGGG---HHHHHHHTCCEEEC
T ss_pred HHhcCCCEEEeCcch---HHHHHHcCCCEEEe
Confidence 334599999998653 56889999999976
No 120
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=39.25 E-value=1.1e+02 Score=26.10 Aligned_cols=31 Identities=13% Similarity=0.254 Sum_probs=23.5
Q ss_pred CcCEEEe-CCcc-hhHHHHHHHcCCCEEEeecc
Q 013835 95 KADAIIA-NPPA-YGHVHVAEALKIPIHIFFTM 125 (435)
Q Consensus 95 ~pDlVi~-d~~~-~~~~~~A~~~~iP~v~~~~~ 125 (435)
.||+||+ |+.. ..++.=|.++|||+|.+.-+
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 183 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 183 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcC
Confidence 6999975 6543 34567899999999998743
No 121
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=39.09 E-value=22 Score=32.67 Aligned_cols=57 Identities=16% Similarity=0.260 Sum_probs=41.9
Q ss_pred hhhcccccEEEEeCCchHHHHHHHh----CC-CEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcC
Q 013835 301 DWLFLQCKAVVHHGGAGTTAAGLRA----AC-PTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLD 374 (435)
Q Consensus 301 ~~~l~~~~l~I~hgG~~s~~Eal~~----G~-P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll~ 374 (435)
.++...+|++|+-||=||++.|+.. ++ |+|.+... -+|. +. +++.+++.+++..+++
T Consensus 109 ~~~~~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-------------~lGF--Lt--~~~~~~~~~al~~il~ 170 (388)
T 3afo_A 109 QDIVNRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALG-------------TLGF--LS--PFDFKEHKKVFQEVIS 170 (388)
T ss_dssp HHHHHHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEECS-------------SCCS--SC--CEEGGGHHHHHHHHHT
T ss_pred hhcccCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEECC-------------Cccc--CC--cCChHHHHHHHHHHhc
Confidence 4456789999999999999999764 57 79988742 2453 32 3456888888888873
No 122
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=38.99 E-value=1e+02 Score=25.04 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=41.6
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEEEeCCch--
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVHHGGAG-- 317 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~hgG~~-- 317 (435)
++++.|-.|+.. +..+.+++++.+..+.++.. .+.+..+|.+|-.||..
T Consensus 3 ~~I~iiD~g~~n-------~~si~~al~~~G~~~~v~~~----------------------~~~l~~~D~lilPG~g~~~ 53 (211)
T 4gud_A 3 QNVVIIDTGCAN-------ISSVKFAIERLGYAVTISRD----------------------PQVVLAADKLFLPGVGTAS 53 (211)
T ss_dssp CCEEEECCCCTT-------HHHHHHHHHHTTCCEEEECC----------------------HHHHHHCSEEEECCCSCHH
T ss_pred CEEEEEECCCCh-------HHHHHHHHHHCCCEEEEECC----------------------HHHHhCCCEEEECCCCCHH
Confidence 357788887642 34477888889988876521 12235667777666421
Q ss_pred ----------HHHHHHHhCCCEEeec
Q 013835 318 ----------TTAAGLRAACPTTIVP 333 (435)
Q Consensus 318 ----------s~~Eal~~G~P~l~~P 333 (435)
.+-++...|+|++.+=
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~PvlGIC 79 (211)
T 4gud_A 54 EAMKNLTERDLIELVKRVEKPLLGIC 79 (211)
T ss_dssp HHHHHHHHTTCHHHHHHCCSCEEEET
T ss_pred HHHHHHHhcChHHHHHHcCCCEEEEc
Confidence 1344567899999875
No 123
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=38.40 E-value=24 Score=29.76 Aligned_cols=37 Identities=19% Similarity=0.194 Sum_probs=24.8
Q ss_pred CcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEc
Q 013835 241 KPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINK 277 (435)
Q Consensus 241 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 277 (435)
..++|.|--......+.+++..-+.+.+.+..+|+.-
T Consensus 154 ~~~lVGFaaEt~~~~~~l~~~A~~kL~~k~~D~IvaN 190 (232)
T 2gk4_A 154 TIHLIGFKLLVDVTEDHLVDIARKSLIKNQADLIIAN 190 (232)
T ss_dssp TSEEEEEEEESSCCHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcEEEEEEeccCCchhHHHHHHHHHHHHhCCCEEEEe
Confidence 3566766433333345678888888888899888763
No 124
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=38.02 E-value=1.4e+02 Score=24.79 Aligned_cols=96 Identities=13% Similarity=-0.066 Sum_probs=48.9
Q ss_pred HHHHHHcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCC-CCCCceEEcCCCCh-hhh-ccccc
Q 013835 232 LVKWLEAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLA-EPKDSIYLLDNIPH-DWL-FLQCK 308 (435)
Q Consensus 232 l~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~-~~~~~v~~~~~~p~-~~~-l~~~~ 308 (435)
+.+++. +....+|+.|..+ +-....++..+.+-+++-+...-+..... ...+....+...+. +.+ ...+|
T Consensus 61 lg~~La-~~g~~lVsGGg~G------iM~aa~~gAl~~gG~~iGV~~~~P~~~~~~~~~t~~~~~~~f~~Rk~~m~~~sd 133 (217)
T 1wek_A 61 LGRALA-EAGFGVVTGGGPG------VMEAVNRGAYEAGGVSVGLNIELPHEQKPNPYQTHALSLRYFFVRKVLFVRYAV 133 (217)
T ss_dssp HHHHHH-HHTCEEEECSCSH------HHHHHHHHHHHTTCCEEEEEECCTTCCCCCSCCSEEEEESCHHHHHHHHHHTEE
T ss_pred HHHHHH-HCCCEEEeCChhh------HHHHHHHHHHHcCCCEEEEeeCCcchhhccccCCcCcccCCHHHHHHHHHHhCC
Confidence 344443 3467888877632 33445555555554544331111111111 11122333444433 333 56677
Q ss_pred EEE-EeCCchHHHHHH---H-------hCCCEEeecC
Q 013835 309 AVV-HHGGAGTTAAGL---R-------AACPTTIVPF 334 (435)
Q Consensus 309 l~I-~hgG~~s~~Eal---~-------~G~P~l~~P~ 334 (435)
.|| -.||.||+-|.. . +++|++++..
T Consensus 134 a~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~ 170 (217)
T 1wek_A 134 GFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDR 170 (217)
T ss_dssp EEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECH
T ss_pred EEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCc
Confidence 655 567789977763 3 4799999863
No 125
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=37.99 E-value=1.3e+02 Score=24.00 Aligned_cols=82 Identities=21% Similarity=0.199 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHC--CCeEEEEeCCCcHHHHHh-cCceeEEccccccCCCCCCCCCchhhHHHHHHHHHHHHHhhccCCCc
Q 013835 12 PFVAIGKRLQDY--GHRVRLATHSNFKDFVLT-AGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKEIIYSLLPACRDPDL 88 (435)
Q Consensus 12 p~~~la~~L~~r--Gh~V~~~~~~~~~~~~~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (435)
-++.+|+.|.+. ||++. +|.. -...+++ .|+++..+.. .+.+ -.+.+...+
T Consensus 41 ~lv~~ak~~~~lL~Gf~L~-AT~g-Ta~~L~e~~Gl~v~~v~k---------~~eG---G~pqI~d~I------------ 94 (178)
T 1vmd_A 41 DLLEWVSFNLGTLSKHELY-ATGT-TGALLQEKLGLKVHRLKS---------GPLG---GDQQIGAMI------------ 94 (178)
T ss_dssp HHHHHHHHSHHHHTTSEEE-ECHH-HHHHHHHHHCCCCEECSC---------GGGT---HHHHHHHHH------------
T ss_pred HHHHHHHHHHHHhcCCEEE-EchH-HHHHHHHHhCceeEEEee---------cCCC---CCchHHHHH------------
Confidence 378899999998 99653 4443 3456666 8998877641 0000 112222222
Q ss_pred cCCcccCcCEEEeCCc--c--------hhHHHHHHHcCCCEEEe
Q 013835 89 DSGIAFKADAIIANPP--A--------YGHVHVAEALKIPIHIF 122 (435)
Q Consensus 89 ~~~~~~~pDlVi~d~~--~--------~~~~~~A~~~~iP~v~~ 122 (435)
++-+.|+||..+- . ..-.-+|-.++||+++.
T Consensus 95 ---~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tn 135 (178)
T 1vmd_A 95 ---AEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAIT 135 (178)
T ss_dssp ---HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESS
T ss_pred ---HCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeC
Confidence 2237899986321 1 22356899999999874
No 126
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=37.86 E-value=18 Score=28.96 Aligned_cols=33 Identities=12% Similarity=0.013 Sum_probs=25.1
Q ss_pred CccchhHHHHHHHHHHHCCCeEEEEeCCCcHHH
Q 013835 6 TRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDF 38 (435)
Q Consensus 6 ~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~ 38 (435)
+.....-...+.+.|+++|++|.++.++...+.
T Consensus 14 Gs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~~f 46 (175)
T 3qjg_A 14 GSVNSINISHYIIELKSKFDEVNVIASTNGRKF 46 (175)
T ss_dssp SSGGGGGHHHHHHHHTTTCSEEEEEECTGGGGG
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEECcCHHHH
Confidence 344555688999999999999999976654443
No 127
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=37.43 E-value=1.3e+02 Score=28.32 Aligned_cols=35 Identities=11% Similarity=0.197 Sum_probs=21.6
Q ss_pred HHHHHHHHHHCCCeEEEEeC--CCcHHHHHhcCceeE
Q 013835 13 FVAIGKRLQDYGHRVRLATH--SNFKDFVLTAGLEFY 47 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~--~~~~~~~~~~g~~~~ 47 (435)
|-.+|+.|.++|++|+..=. ....+.+++.|+.+.
T Consensus 25 ~sglA~~l~~~G~~V~g~D~~~~~~~~~L~~~gi~~~ 61 (469)
T 1j6u_A 25 MSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIF 61 (469)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEE
Confidence 45679999999999987621 112233445565544
No 128
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=37.03 E-value=1.1e+02 Score=25.84 Aligned_cols=38 Identities=24% Similarity=0.166 Sum_probs=26.3
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCc--HHHHHhcCceeEEcc
Q 013835 13 FVAIGKRLQDYGHRVRLATHSNF--KDFVLTAGLEFYPLD 50 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~~--~~~~~~~g~~~~~i~ 50 (435)
-.++|++|.++|++|.++..... .+.+...++.++..+
T Consensus 40 G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D 79 (260)
T 3gem_A 40 GLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGD 79 (260)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECC
Confidence 35789999999999999875432 344455566666554
No 129
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=36.77 E-value=1.1e+02 Score=27.92 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=13.8
Q ss_pred HHHHHHHcCCCEEEeec
Q 013835 108 HVHVAEALKIPIHIFFT 124 (435)
Q Consensus 108 ~~~~A~~~~iP~v~~~~ 124 (435)
..++|+.+|||+++...
T Consensus 278 lAl~Ak~~~vPfyV~ap 294 (374)
T 2yvk_A 278 LAILANAFDIPFFVAAP 294 (374)
T ss_dssp HHHHHHHTTCCEEEECC
T ss_pred HHHHHHHcCCCEEEecc
Confidence 35789999999998754
No 130
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=36.69 E-value=33 Score=25.89 Aligned_cols=37 Identities=14% Similarity=-0.002 Sum_probs=26.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCCC-cHHHHHhcCceeEEc
Q 013835 13 FVAIGKRLQDYGHRVRLATHSN-FKDFVLTAGLEFYPL 49 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~-~~~~~~~~g~~~~~i 49 (435)
-..+|+.|.++||+|+++..+. ..+.+...|+.++.-
T Consensus 19 G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~g 56 (140)
T 3fwz_A 19 GSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLG 56 (140)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEES
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEEC
Confidence 4578999999999999997653 334455678776554
No 131
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=36.47 E-value=1.7e+02 Score=23.76 Aligned_cols=97 Identities=12% Similarity=0.047 Sum_probs=51.5
Q ss_pred HHHHHHcCCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCC-CCCCCC-CCCCceEEcCCC-Chhhh-cccc
Q 013835 232 LVKWLEAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWG-GLGNLA-EPKDSIYLLDNI-PHDWL-FLQC 307 (435)
Q Consensus 232 l~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~-~~~~~~-~~~~~v~~~~~~-p~~~~-l~~~ 307 (435)
+-+++. .....+|+.|... .+...+.++..+.+-+++=+.... ...... +.-+...+++.. ..+.+ ...+
T Consensus 45 lg~~La-~~g~~lV~GGG~~-----GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~~~~~~i~~~~~~~Rk~~m~~~s 118 (199)
T 3qua_A 45 VGSSIA-ARGWTLVSGGGNV-----SAMGAVAQAARAKGGHTVGVIPKALVHRELADVDAAELIVTDTMRERKREMEHRS 118 (199)
T ss_dssp HHHHHH-HTTCEEEECCBCS-----HHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCTTSSEEEEESSHHHHHHHHHHHC
T ss_pred HHHHHH-HCCCEEEECCCcc-----CHHHHHHHHHHHcCCcEEEEeCchhhhccccCCCCCeeEEcCCHHHHHHHHHHhc
Confidence 334443 3456667765431 134445566656655555333221 111111 122344555543 33333 6788
Q ss_pred cEEEE-eCCchHHHHHHH---------hCCCEEeecC
Q 013835 308 KAVVH-HGGAGTTAAGLR---------AACPTTIVPF 334 (435)
Q Consensus 308 ~l~I~-hgG~~s~~Eal~---------~G~P~l~~P~ 334 (435)
|.||. .||.||+-|... +++|++++-.
T Consensus 119 da~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 119 DAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp SEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred CccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 87765 567899877743 5999999864
No 132
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=36.33 E-value=1e+02 Score=29.22 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=21.7
Q ss_pred cCcCEEEeCCcchhHHHHHHHcCCCEEEee
Q 013835 94 FKADAIIANPPAYGHVHVAEALKIPIHIFF 123 (435)
Q Consensus 94 ~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~ 123 (435)
.+||++|.+... ..+|+++|||++-++
T Consensus 416 ~~pDL~ig~~~~---~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 416 IKPDLIGSGIKE---KFIFQKMGIPFREMH 442 (492)
T ss_dssp HCCSEEEECHHH---HHHHHHTTCCEEESS
T ss_pred cCCcEEEeCcch---hHHHHHcCCCEEecc
Confidence 499999998543 678999999998643
No 133
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=36.24 E-value=2e+02 Score=27.43 Aligned_cols=27 Identities=15% Similarity=0.276 Sum_probs=20.9
Q ss_pred ccCcCEEEeCCcchhHHHHHHHc-------CCCEEEe
Q 013835 93 AFKADAIIANPPAYGHVHVAEAL-------KIPIHIF 122 (435)
Q Consensus 93 ~~~pDlVi~d~~~~~~~~~A~~~-------~iP~v~~ 122 (435)
+.+||++|.++.. ..+|++. |||++-+
T Consensus 432 ~~~pDLiig~~~~---~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 432 TRQPDFMIGNSYG---KFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHCCSEEEECGGG---HHHHHHHHHHCGGGCCCEEEC
T ss_pred hcCCCEEEECcch---HHHHHHhhcccccCCCCeEEe
Confidence 3489999999653 5577788 9999865
No 134
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=35.33 E-value=31 Score=31.30 Aligned_cols=54 Identities=17% Similarity=0.202 Sum_probs=39.2
Q ss_pred hcccccEEEEeCCchHHHHHHHh----CCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 303 LFLQCKAVVHHGGAGTTAAGLRA----ACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 303 ~l~~~~l~I~hgG~~s~~Eal~~----G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
+-..+|++|+=||=||++.|... ++|++.+-.. .+|. .. +++.+++.+++.+++
T Consensus 105 ~~~~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~G-------------~LGF-Lt---~~~~~~~~~~l~~vl 162 (365)
T 3pfn_A 105 ISNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLG-------------SLGF-LT---PFSFENFQSQVTQVI 162 (365)
T ss_dssp CTTTCSEEEEESSTTHHHHHHHHCSSSCCCEEEEESS-------------SCTT-TC---CEESTTHHHHHHHHH
T ss_pred cccCCCEEEEEcChHHHHHHHHHhccCCCCEEEEcCC-------------CCcc-ce---eecHHHHHHHHHHHH
Confidence 34789999999999999999873 5899987541 3454 22 334567777777776
No 135
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=35.01 E-value=1.1e+02 Score=27.47 Aligned_cols=39 Identities=15% Similarity=0.335 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHCCCeEEEEe---CCCcH------HHHHhcCceeEEcc
Q 013835 12 PFVAIGKRLQDYGHRVRLAT---HSNFK------DFVLTAGLEFYPLD 50 (435)
Q Consensus 12 p~~~la~~L~~rGh~V~~~~---~~~~~------~~~~~~g~~~~~i~ 50 (435)
..+.+.+..+++|..+.+++ .+... ..+.+.|+++.-+.
T Consensus 168 tvl~~l~~A~~~gk~~~V~v~EtRP~~qG~rlta~eL~~~GI~vtlI~ 215 (347)
T 1t9k_A 168 TALGVIRAAVESGKRIRVFADETRPYLQGARLTAWELMKDGIEVYVIT 215 (347)
T ss_dssp SHHHHHHHHHHTTCCEEEEEECCTTTTHHHHTHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCccccHHHHHHHHHhCCCCEEEEe
Confidence 34466666677887776664 23322 23345788877775
No 136
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=34.99 E-value=31 Score=29.39 Aligned_cols=23 Identities=22% Similarity=0.330 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCC
Q 013835 11 QPFVAIGKRLQDYGHRVRLATHSN 34 (435)
Q Consensus 11 ~p~~~la~~L~~rGh~V~~~~~~~ 34 (435)
--..+|+++|.+.| +|+++++..
T Consensus 15 pGi~aL~~~l~~~g-~V~VVAP~~ 37 (251)
T 2phj_A 15 PGINALREALKSLG-RVVVVAPDR 37 (251)
T ss_dssp HHHHHHHHHHTTTS-EEEEEEESS
T ss_pred HHHHHHHHHHHhcC-CEEEEecCC
Confidence 34678899999888 999998764
No 137
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=33.53 E-value=1.5e+02 Score=28.29 Aligned_cols=27 Identities=26% Similarity=0.393 Sum_probs=21.5
Q ss_pred cCcCEEEeCCcchhHHHHHHHcCCCEEEee
Q 013835 94 FKADAIIANPPAYGHVHVAEALKIPIHIFF 123 (435)
Q Consensus 94 ~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~ 123 (435)
.+||++|.+.. ...+|+++|||++.+.
T Consensus 371 ~~pDl~ig~~~---~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 371 VEPAAIFGTQM---ERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HCCSEEEECHH---HHHHHHHHTCCEEECS
T ss_pred cCCCEEEeccc---hHHHHHhcCCCeEecc
Confidence 39999999854 3568899999998754
No 138
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=33.52 E-value=1.3e+02 Score=26.22 Aligned_cols=32 Identities=13% Similarity=0.239 Sum_probs=23.8
Q ss_pred CcCEEEe-CCcc-hhHHHHHHHcCCCEEEeeccC
Q 013835 95 KADAIIA-NPPA-YGHVHVAEALKIPIHIFFTMP 126 (435)
Q Consensus 95 ~pDlVi~-d~~~-~~~~~~A~~~~iP~v~~~~~~ 126 (435)
.||+||+ |+.. .-++.=|.++|||+|.++-+.
T Consensus 118 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 151 (295)
T 2zkq_b 118 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 151 (295)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCeEEEeCCCcchhHHHHHHHhCCCEEEEecCC
Confidence 6999975 6533 345678999999999987543
No 139
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=32.97 E-value=1.2e+02 Score=27.76 Aligned_cols=39 Identities=8% Similarity=-0.049 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHCCCeEEEEeC---CCcH------HHHHhcCceeEEcc
Q 013835 12 PFVAIGKRLQDYGHRVRLATH---SNFK------DFVLTAGLEFYPLD 50 (435)
Q Consensus 12 p~~~la~~L~~rGh~V~~~~~---~~~~------~~~~~~g~~~~~i~ 50 (435)
..+.+.+...++|-.+.+++. +... ..+...|+++.-+.
T Consensus 197 Tal~~l~~A~~~gk~~~V~v~EtRP~~qGarltA~eL~~~GIpvtlI~ 244 (383)
T 2a0u_A 197 TALGVVRQLFYDGKLERVYACETRPWNQGARLTVYECVQEDIPCTLIC 244 (383)
T ss_dssp SHHHHHHHHHHTTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEEC
T ss_pred hHHHHHHHHHHcCCeEEEEEeCCCCccchHHHHHHHHHHcCCCEEEEe
Confidence 356777778888987777753 2222 23345788777775
No 140
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=32.79 E-value=76 Score=23.45 Aligned_cols=31 Identities=16% Similarity=0.014 Sum_probs=19.9
Q ss_pred cCcCEEEeCCcch--hHHHHH---HHcCCCEEEeec
Q 013835 94 FKADAIIANPPAY--GHVHVA---EALKIPIHIFFT 124 (435)
Q Consensus 94 ~~pDlVi~d~~~~--~~~~~A---~~~~iP~v~~~~ 124 (435)
.+||+|+.|...+ -|+.++ +..++|+|.++.
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 3899999994433 234443 345799877653
No 141
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=32.73 E-value=48 Score=24.85 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=26.0
Q ss_pred HHHHHHHHHHCCCeEEEEeCCC-cHHHHHhcCceeEEc
Q 013835 13 FVAIGKRLQDYGHRVRLATHSN-FKDFVLTAGLEFYPL 49 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~-~~~~~~~~g~~~~~i 49 (435)
-..+|+.|.++||+|+++..+. ..+.....++.++..
T Consensus 18 G~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~g 55 (141)
T 3llv_A 18 GVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIA 55 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEEC
Confidence 4678999999999999996543 223445567766554
No 142
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=32.49 E-value=2.1e+02 Score=23.48 Aligned_cols=39 Identities=15% Similarity=0.109 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHC--CCeEEEEeCC--C--cHHHHHhcCceeEEcc
Q 013835 12 PFVAIGKRLQDY--GHRVRLATHS--N--FKDFVLTAGLEFYPLD 50 (435)
Q Consensus 12 p~~~la~~L~~r--Gh~V~~~~~~--~--~~~~~~~~g~~~~~i~ 50 (435)
-+.++.++|.+. +|+|..+..+ + ..+..++.|++++.++
T Consensus 16 ~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~ 60 (212)
T 3av3_A 16 NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFS 60 (212)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeC
Confidence 367788888877 6898766432 2 3456778999998765
No 143
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=32.47 E-value=1.4e+02 Score=24.56 Aligned_cols=48 Identities=10% Similarity=-0.089 Sum_probs=30.9
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeCC----CcHHHHHhcCceeEEc
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATHS----NFKDFVLTAGLEFYPL 49 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~----~~~~~~~~~g~~~~~i 49 (435)
.+.++-.|-....-++..|..+|++|+.+..+ .+.+.+.+.+...+.+
T Consensus 98 ~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l 149 (215)
T 3ezx_A 98 FVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLL 149 (215)
T ss_dssp EECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEE
T ss_pred EeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEE
Confidence 35566777777777777888888888777432 2334445556555555
No 144
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.20 E-value=1.6e+02 Score=24.12 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=23.7
Q ss_pred CcCEEEe-CCcc-hhHHHHHHHcCCCEEEeeccC
Q 013835 95 KADAIIA-NPPA-YGHVHVAEALKIPIHIFFTMP 126 (435)
Q Consensus 95 ~pDlVi~-d~~~-~~~~~~A~~~~iP~v~~~~~~ 126 (435)
.||++|+ |+.. ..++.=|.++|||+|.++-+.
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DTn 144 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALVDTE 144 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEEcCC
Confidence 7999965 6543 345677899999999987543
No 145
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=31.75 E-value=1.6e+02 Score=27.46 Aligned_cols=43 Identities=23% Similarity=0.301 Sum_probs=27.7
Q ss_pred ceEEcCCC-Chhhh-cccccEEE-EeCCchHHHHHH---H---------hCCCEEeec
Q 013835 291 SIYLLDNI-PHDWL-FLQCKAVV-HHGGAGTTAAGL---R---------AACPTTIVP 333 (435)
Q Consensus 291 ~v~~~~~~-p~~~~-l~~~~l~I-~hgG~~s~~Eal---~---------~G~P~l~~P 333 (435)
...+++.. ....+ ...+|.|| -.||.||+-|.. . +++|++++-
T Consensus 228 elIiv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg 285 (460)
T 3bq9_A 228 ELVILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTG 285 (460)
T ss_dssp EEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEE
T ss_pred eEEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEe
Confidence 34455543 22333 67778666 567789987763 3 589999984
No 146
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=31.65 E-value=49 Score=28.33 Aligned_cols=49 Identities=8% Similarity=-0.155 Sum_probs=38.8
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeC----CCcHHHHHhcCceeEEcc
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATH----SNFKDFVLTAGLEFYPLD 50 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~----~~~~~~~~~~g~~~~~i~ 50 (435)
.+.++-.|-....-++..|..+|++|.++.. +.+.+.+.+.+...+.+.
T Consensus 129 a~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS 181 (258)
T 2i2x_B 129 HVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGT 181 (258)
T ss_dssp EECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEE
T ss_pred EeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEE
Confidence 4677889999999999999999999998852 334456667787877775
No 147
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=31.34 E-value=1.1e+02 Score=27.50 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=26.5
Q ss_pred cCCccchhHHHHHHHHHH--HCCCeEEEEeCCC
Q 013835 4 VGTRGDVQPFVAIGKRLQ--DYGHRVRLATHSN 34 (435)
Q Consensus 4 ~~~~GH~~p~~~la~~L~--~rGh~V~~~~~~~ 34 (435)
-|+-|=..-...+|..|+ ++|++|.++..+.
T Consensus 26 kGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 26 KGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 367788888999999999 8999999997654
No 148
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=31.33 E-value=74 Score=29.67 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=28.4
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeCCCc
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNF 35 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~ 35 (435)
+..++.|=..-+..||..|+.+|++|.+++.+.+
T Consensus 103 vG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 103 VGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred ECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 3456888999999999999999999999975543
No 149
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=31.25 E-value=29 Score=30.79 Aligned_cols=21 Identities=10% Similarity=-0.031 Sum_probs=17.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCC
Q 013835 13 FVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~ 33 (435)
-.++|+++.++|++|++++.+
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHHCCCEEEEEecC
Confidence 357899999999999999753
No 150
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=31.20 E-value=37 Score=27.85 Aligned_cols=33 Identities=12% Similarity=0.077 Sum_probs=25.4
Q ss_pred CCccchh-HHHHHHHHHHHCCCeEEEEeCCCcHH
Q 013835 5 GTRGDVQ-PFVAIGKRLQDYGHRVRLATHSNFKD 37 (435)
Q Consensus 5 ~~~GH~~-p~~~la~~L~~rGh~V~~~~~~~~~~ 37 (435)
.|.+..+ -...+.+.|+++|++|+++.++...+
T Consensus 15 TGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~ 48 (201)
T 3lqk_A 15 TGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQT 48 (201)
T ss_dssp CSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCC
T ss_pred EChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHH
Confidence 3445566 78999999999999999997665433
No 151
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=31.12 E-value=73 Score=27.63 Aligned_cols=77 Identities=18% Similarity=0.053 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEEEeCCchHHHHHHHh--C-CCEEeecCC
Q 013835 259 TQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVHHGGAGTTAAGLRA--A-CPTTIVPFF 335 (435)
Q Consensus 259 ~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~hgG~~s~~Eal~~--G-~P~l~~P~~ 335 (435)
.+.+.+.+++.+..+.+... .. + .+..+|++|+=||=||++.|+.. + +|++.+...
T Consensus 42 ~~~l~~~L~~~g~~v~~~~~--~~----~---------------~~~~~DlvIvlGGDGT~L~aa~~~~~~~PilGIN~G 100 (278)
T 1z0s_A 42 VKRIEEALKRLEVEVELFNQ--PS----E---------------ELENFDFIVSVGGDGTILRILQKLKRCPPIFGINTG 100 (278)
T ss_dssp HHHHHHHHHHTTCEEEEESS--CC----G---------------GGGGSSEEEEEECHHHHHHHHTTCSSCCCEEEEECS
T ss_pred HHHHHHHHHHCCCEEEEccc--cc----c---------------ccCCCCEEEEECCCHHHHHHHHHhCCCCcEEEECCC
Confidence 45577777888887765321 10 0 12479999999999999999865 4 899988753
Q ss_pred CChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 336 GDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 336 ~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
-+|. ..+ .+++++.++|..++
T Consensus 101 -------------~lGF-Lt~---~~~~~~~~~l~~l~ 121 (278)
T 1z0s_A 101 -------------RVGL-LTH---ASPENFEVELKKAV 121 (278)
T ss_dssp -------------SSCT-TCC---BBTTBCHHHHHHHH
T ss_pred -------------CCcc-ccc---cCHHHHHHHHHHHH
Confidence 4564 332 34566666666653
No 152
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=30.68 E-value=34 Score=25.81 Aligned_cols=32 Identities=6% Similarity=0.158 Sum_probs=24.0
Q ss_pred cchhHHHHHHHHHHHCCCeEEEEeCCCcHHHH
Q 013835 8 GDVQPFVAIGKRLQDYGHRVRLATHSNFKDFV 39 (435)
Q Consensus 8 GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~ 39 (435)
||+++...+-+.|.++|.+..+++.+....++
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~Yl 32 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYL 32 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHH
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceee
Confidence 78999999999999999999999976544443
No 153
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=30.64 E-value=1.3e+02 Score=25.31 Aligned_cols=31 Identities=16% Similarity=0.408 Sum_probs=23.1
Q ss_pred CcCEEEe-CCcc-hhHHHHHHHcCCCEEEeecc
Q 013835 95 KADAIIA-NPPA-YGHVHVAEALKIPIHIFFTM 125 (435)
Q Consensus 95 ~pDlVi~-d~~~-~~~~~~A~~~~iP~v~~~~~ 125 (435)
.||+||+ |+.. ..++.=|.++|||+|.+.-+
T Consensus 114 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 146 (241)
T 2xzm_B 114 EPRVLIVTDPRSDFQAIKEASYVNIPVIALCDS 146 (241)
T ss_dssp CCSEEEESCTTTTHHHHHHHTTTTCCEEECCCS
T ss_pred CCCEEEEECCCcchHHHHHHHHhCCCEEEEecC
Confidence 6999975 6543 34567789999999998643
No 154
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=30.54 E-value=20 Score=28.90 Aligned_cols=35 Identities=14% Similarity=0.039 Sum_probs=26.7
Q ss_pred CccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHH
Q 013835 6 TRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVL 40 (435)
Q Consensus 6 ~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~ 40 (435)
|.....-...+.+.|+++|++|.++.++...+.+.
T Consensus 11 Gs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 11 ASINVININHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp SCGGGGGHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 44455578899999999999999998776554443
No 155
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=29.74 E-value=1.6e+02 Score=23.20 Aligned_cols=32 Identities=9% Similarity=0.216 Sum_probs=23.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCc------HHHHHhcCc
Q 013835 13 FVAIGKRLQDYGHRVRLATHSNF------KDFVLTAGL 44 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~~------~~~~~~~g~ 44 (435)
+..+.+.|+++|+.+.++|.... ...++..|+
T Consensus 39 ~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl 76 (189)
T 3ib6_A 39 AKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGI 76 (189)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCc
Confidence 56888999999999999986432 344556665
No 156
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=29.66 E-value=39 Score=28.79 Aligned_cols=22 Identities=9% Similarity=0.134 Sum_probs=18.2
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCc
Q 013835 13 FVAIGKRLQDYGHRVRLATHSNF 35 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~~ 35 (435)
..+|+++|++.| +|+++++..-
T Consensus 16 i~aL~~~l~~~g-~V~VVAP~~~ 37 (247)
T 1j9j_A 16 IIVLAELLSEEH-EVFVVAPDKE 37 (247)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSC
T ss_pred HHHHHHHHHhCC-CEEEEecCCC
Confidence 678899999888 8999987643
No 157
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=29.57 E-value=1.9e+02 Score=22.22 Aligned_cols=22 Identities=27% Similarity=0.187 Sum_probs=19.1
Q ss_pred HHHHHHHHHHCCCeEEEEeCCC
Q 013835 13 FVAIGKRLQDYGHRVRLATHSN 34 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~ 34 (435)
+..+.++|+++|+.+.++|...
T Consensus 32 ~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 32 SLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp HHHHHHHHHHTTCEEEEEEECT
T ss_pred HHHHHHHHHHCCCEEEEEECCC
Confidence 6788899999999999998654
No 158
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=29.53 E-value=52 Score=29.06 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=27.2
Q ss_pred HHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEE
Q 013835 14 VAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYP 48 (435)
Q Consensus 14 ~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~ 48 (435)
..+|..|.+.||+|+++..+. .+.+.+.|+....
T Consensus 15 ~~~a~~L~~~g~~V~~~~r~~-~~~i~~~Gl~~~~ 48 (320)
T 3i83_A 15 SFYGALLAKTGHCVSVVSRSD-YETVKAKGIRIRS 48 (320)
T ss_dssp HHHHHHHHHTTCEEEEECSTT-HHHHHHHCEEEEE
T ss_pred HHHHHHHHhCCCeEEEEeCCh-HHHHHhCCcEEee
Confidence 357888999999999998776 4777788877665
No 159
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=29.16 E-value=36 Score=28.89 Aligned_cols=21 Identities=19% Similarity=0.360 Sum_probs=17.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCCC
Q 013835 13 FVAIGKRLQDYGHRVRLATHSN 34 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~ 34 (435)
..+|+++|++.| +|+++++..
T Consensus 16 i~aL~~~l~~~g-~V~VVAP~~ 36 (244)
T 2e6c_A 16 LWALAEAASQFG-EVFVAAPDT 36 (244)
T ss_dssp HHHHHHHHTTTS-EEEEEEECS
T ss_pred HHHHHHHHHhCC-CEEEEecCC
Confidence 678899999888 899998754
No 160
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=29.01 E-value=61 Score=28.49 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=26.9
Q ss_pred HHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEE
Q 013835 14 VAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYP 48 (435)
Q Consensus 14 ~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~ 48 (435)
..+|..|.+.||+|+++..+. .+.+.+.|+....
T Consensus 15 ~~~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~ 48 (312)
T 3hn2_A 15 LYYGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFS 48 (312)
T ss_dssp HHHHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEE
T ss_pred HHHHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEc
Confidence 356888999999999998776 4777788877654
No 161
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=28.61 E-value=36 Score=28.05 Aligned_cols=31 Identities=13% Similarity=0.028 Sum_probs=22.9
Q ss_pred CccchhH-HHHHHHHHHHCCCeEEEEeCCCcH
Q 013835 6 TRGDVQP-FVAIGKRLQDYGHRVRLATHSNFK 36 (435)
Q Consensus 6 ~~GH~~p-~~~la~~L~~rGh~V~~~~~~~~~ 36 (435)
|.+..+- ...+.+.|+++|++|.++.++...
T Consensus 14 Gsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 14 GSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp SCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred ChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 3355554 789999999999999999776654
No 162
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=28.50 E-value=3.2e+02 Score=24.45 Aligned_cols=28 Identities=11% Similarity=0.141 Sum_probs=23.9
Q ss_pred CccchhHHHHHHHHHHHCCCeEEEEeCC
Q 013835 6 TRGDVQPFVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 6 ~~GH~~p~~~la~~L~~rGh~V~~~~~~ 33 (435)
+-|-...+..|.++|+++|+++.|+.+.
T Consensus 163 ~VGK~~ts~~L~~~l~~~G~~a~~~~tg 190 (349)
T 2obn_A 163 AIGKMSTSLELHWAAKLRGWRSKFLATG 190 (349)
T ss_dssp SSSHHHHHHHHHHHHHHTTCCEEEECCS
T ss_pred cccceeHHHHHHHHHHhcCCcEEEEecc
Confidence 4566788999999999999999998754
No 163
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=28.49 E-value=47 Score=27.42 Aligned_cols=33 Identities=12% Similarity=-0.045 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhc
Q 013835 10 VQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTA 42 (435)
Q Consensus 10 ~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~ 42 (435)
..-...+.+.|+++|++|.++.++.....+...
T Consensus 17 a~k~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 17 AQYGLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 334789999999999999999887766666543
No 164
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=28.39 E-value=44 Score=27.29 Aligned_cols=32 Identities=16% Similarity=0.042 Sum_probs=26.2
Q ss_pred chhHHHHHHHHHHHC-CCeEEEEeCCCcHHHHH
Q 013835 9 DVQPFVAIGKRLQDY-GHRVRLATHSNFKDFVL 40 (435)
Q Consensus 9 H~~p~~~la~~L~~r-Gh~V~~~~~~~~~~~~~ 40 (435)
...-...+.+.|+++ |++|.++.++...+.+.
T Consensus 12 aa~k~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 12 GAPLGVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 344589999999999 99999998877766665
No 165
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=28.33 E-value=2.2e+02 Score=26.66 Aligned_cols=35 Identities=17% Similarity=0.231 Sum_probs=21.5
Q ss_pred HHHHHHHHHHCCCeEEEEeC--CCcHHHHHhcCceeE
Q 013835 13 FVAIGKRLQDYGHRVRLATH--SNFKDFVLTAGLEFY 47 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~--~~~~~~~~~~g~~~~ 47 (435)
|.++|+.|.++|++|+..=. ....+.+...|+.+.
T Consensus 31 ~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~ 67 (475)
T 1p3d_A 31 MSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIY 67 (475)
T ss_dssp HHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEE
Confidence 45588888888998887622 222234555666553
No 166
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=28.31 E-value=73 Score=20.82 Aligned_cols=29 Identities=7% Similarity=0.041 Sum_probs=22.9
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHHHH
Q 013835 341 WGERVHARGVGPPPIPVDEFSLPKLINAINF 371 (435)
Q Consensus 341 na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ 371 (435)
.-++++++|+- .-++++++++++.+.++-
T Consensus 33 ql~RL~kLGI~--ktdP~~LT~eEi~~FaRL 61 (71)
T 2eo2_A 33 QLSRLKKLGIH--KTDPSTLTEEEVRKFARL 61 (71)
T ss_dssp HHHHHHHHTCC--CCSTTTCCHHHHHHHHHT
T ss_pred HHHHHHHcCCC--CCCcccCCHHHHhhceec
Confidence 34688888887 588999999998877654
No 167
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=28.24 E-value=87 Score=25.82 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=26.1
Q ss_pred HHHHHHHHHCCCeEEEEeCCC-cHHHHHhcCc-eeEEcc
Q 013835 14 VAIGKRLQDYGHRVRLATHSN-FKDFVLTAGL-EFYPLD 50 (435)
Q Consensus 14 ~~la~~L~~rGh~V~~~~~~~-~~~~~~~~g~-~~~~i~ 50 (435)
..++++|.++||+|+.++... ..+.+...++ .++..+
T Consensus 35 ~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~D 73 (236)
T 3e8x_A 35 RYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVAN 73 (236)
T ss_dssp HHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcc
Confidence 478899999999999998543 2234445577 776654
No 168
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=28.21 E-value=3.3e+02 Score=24.62 Aligned_cols=36 Identities=31% Similarity=0.512 Sum_probs=22.2
Q ss_pred HHHHHHHHCC-CeEEEEeCCCc-------HH----HHHhcCceeEEcc
Q 013835 15 AIGKRLQDYG-HRVRLATHSNF-------KD----FVLTAGLEFYPLD 50 (435)
Q Consensus 15 ~la~~L~~rG-h~V~~~~~~~~-------~~----~~~~~g~~~~~i~ 50 (435)
.+.+.+.+.| .+|.+++.+.. .+ .++..|+.+..++
T Consensus 23 ~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~ 70 (387)
T 3bfj_A 23 VVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFD 70 (387)
T ss_dssp GHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEEC
Confidence 4566666667 78888875432 22 2345788876554
No 169
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=28.17 E-value=1.2e+02 Score=27.55 Aligned_cols=38 Identities=16% Similarity=0.228 Sum_probs=23.6
Q ss_pred HHHHHHHHHHCC-CeEEEEeCCCcH---------HHHHhcCceeEEcc
Q 013835 13 FVAIGKRLQDYG-HRVRLATHSNFK---------DFVLTAGLEFYPLD 50 (435)
Q Consensus 13 ~~~la~~L~~rG-h~V~~~~~~~~~---------~~~~~~g~~~~~i~ 50 (435)
...+.+.+.+.| .+|.+++.+... +.+++.|+.+..++
T Consensus 19 ~~~l~~~~~~~g~~~~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~~~ 66 (383)
T 3ox4_A 19 LEKAIKDLNGSGFKNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYD 66 (383)
T ss_dssp HHHHHHTTTTSCCCEEEEEEEHHHHHTTHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEECCchhhCchHHHHHHHHHHcCCeEEEEC
Confidence 445677777777 578888754322 23445688776654
No 170
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=27.97 E-value=1.9e+02 Score=25.57 Aligned_cols=31 Identities=16% Similarity=0.329 Sum_probs=26.5
Q ss_pred cCCccchhHHHHHHHHHHHCCCeEEEEeCCC
Q 013835 4 VGTRGDVQPFVAIGKRLQDYGHRVRLATHSN 34 (435)
Q Consensus 4 ~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~ 34 (435)
.++.|=..-+..||..|+..|.+|.++..+.
T Consensus 113 ~~G~GKTT~~~~LA~~l~~~g~kVllid~D~ 143 (320)
T 1zu4_A 113 VNGTGKTTSLAKMANYYAELGYKVLIAAADT 143 (320)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4677888889999999999999999997554
No 171
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=27.78 E-value=77 Score=26.93 Aligned_cols=32 Identities=16% Similarity=0.331 Sum_probs=23.7
Q ss_pred CcCEEEe-CCcc-hhHHHHHHHcCCCEEEeeccC
Q 013835 95 KADAIIA-NPPA-YGHVHVAEALKIPIHIFFTMP 126 (435)
Q Consensus 95 ~pDlVi~-d~~~-~~~~~~A~~~~iP~v~~~~~~ 126 (435)
.||+||+ |+.. ..++.=|.++|||+|.++-+.
T Consensus 117 ~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial~DTn 150 (252)
T 3u5c_A 117 EPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLD 150 (252)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEEEECTT
T ss_pred CCceEEEeCCccchHHHHHHHHcCCCEEEEEcCC
Confidence 7999975 6543 345667899999999987543
No 172
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=27.60 E-value=25 Score=28.72 Aligned_cols=43 Identities=9% Similarity=-0.015 Sum_probs=31.2
Q ss_pred ccccEEEEeCCchHHHHHHHhCCCEEeecCC-CChhhHHHHHHHc
Q 013835 305 LQCKAVVHHGGAGTTAAGLRAACPTTIVPFF-GDQPFWGERVHAR 348 (435)
Q Consensus 305 ~~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~-~dQ~~na~~v~~~ 348 (435)
..+|++|++||....+..- .++|+|-++.. +|=...-..+.+.
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~al~~a~~~ 93 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRAVYNAKRF 93 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHHGGG
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHHHHHHHhh
Confidence 5789999999998888875 68999999866 3444333344433
No 173
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=27.57 E-value=2.6e+02 Score=22.98 Aligned_cols=35 Identities=26% Similarity=0.239 Sum_probs=22.7
Q ss_pred HHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEc
Q 013835 14 VAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPL 49 (435)
Q Consensus 14 ~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i 49 (435)
.++|++|.++|++|+++...... ..+..++.++..
T Consensus 16 ~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~ 50 (239)
T 2ekp_A 16 RAIAEALVARGYRVAIASRNPEE-AAQSLGAVPLPT 50 (239)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHH-HHHHHTCEEEEC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHH-HHHhhCcEEEec
Confidence 57899999999999988754322 222234444443
No 174
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=27.46 E-value=1.1e+02 Score=27.72 Aligned_cols=28 Identities=29% Similarity=0.233 Sum_probs=24.2
Q ss_pred CCccchhHHHHHHHHHHHCCCeEEEEeC
Q 013835 5 GTRGDVQPFVAIGKRLQDYGHRVRLATH 32 (435)
Q Consensus 5 ~~~GH~~p~~~la~~L~~rGh~V~~~~~ 32 (435)
|+-|-..-...+|..|+++|++|.++..
T Consensus 11 GG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 11 SGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp BHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 5667778889999999999999999965
No 175
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=27.33 E-value=2.5e+02 Score=23.08 Aligned_cols=28 Identities=14% Similarity=0.146 Sum_probs=20.8
Q ss_pred CcCEEEeCCcchh---HHHHHHHcCCCEEEe
Q 013835 95 KADAIIANPPAYG---HVHVAEALKIPIHIF 122 (435)
Q Consensus 95 ~pDlVi~d~~~~~---~~~~A~~~~iP~v~~ 122 (435)
+||+|+......+ +..+|.++++|.++-
T Consensus 91 ~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 91 QPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp CCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred CCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 8999998644333 356889999998763
No 176
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=27.08 E-value=2.7e+02 Score=23.13 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHC--CCeEEEE-eC-CC--cHHHHHhcCceeEEcc
Q 013835 12 PFVAIGKRLQDY--GHRVRLA-TH-SN--FKDFVLTAGLEFYPLD 50 (435)
Q Consensus 12 p~~~la~~L~~r--Gh~V~~~-~~-~~--~~~~~~~~g~~~~~i~ 50 (435)
-+.++.++|.+. +++|..+ |. ++ ..+..++.|+++..++
T Consensus 35 ~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~ 79 (229)
T 3auf_A 35 NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMD 79 (229)
T ss_dssp HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEEC
Confidence 467788888876 6788666 43 22 2356778999998765
No 177
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=27.08 E-value=2.5e+02 Score=26.90 Aligned_cols=29 Identities=14% Similarity=0.006 Sum_probs=22.6
Q ss_pred CcccCcCEEEeCCcchhHHHHHHHcCCCEEEe
Q 013835 91 GIAFKADAIIANPPAYGHVHVAEALKIPIHIF 122 (435)
Q Consensus 91 ~~~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~ 122 (435)
+++.+||+++.... ...+|+++|||++-+
T Consensus 452 i~~~~pDl~ig~~~---~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 452 LEKLKPDMFFAGIK---EKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHCCSEEEECHH---HHHHHHHTTCEEEET
T ss_pred HHhcCCCEEEcccc---hhHHHHhcCCCEEEe
Confidence 44559999998854 357889999999865
No 178
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=27.02 E-value=4.2e+02 Score=25.27 Aligned_cols=27 Identities=19% Similarity=0.268 Sum_probs=20.2
Q ss_pred ccCcCEEEeCCcchhHHHHHHHc-------CCCEEEe
Q 013835 93 AFKADAIIANPPAYGHVHVAEAL-------KIPIHIF 122 (435)
Q Consensus 93 ~~~pDlVi~d~~~~~~~~~A~~~-------~iP~v~~ 122 (435)
+.+||++|.+... ..+|++. |||++-+
T Consensus 436 ~~~pDLlig~s~~---k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 436 TDKPDFMIGNSYG---KFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HTCCSEEEECTTH---HHHHHHHHHHCGGGCCCEEEC
T ss_pred hcCCCEEEECccH---HHHHHHhhcccccCCCceEEe
Confidence 3489999999754 3466666 9999875
No 179
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=26.83 E-value=68 Score=25.33 Aligned_cols=47 Identities=21% Similarity=0.349 Sum_probs=33.4
Q ss_pred ccCCcc-----chhHHHHHHHHHHHCCCeEEEEeCC-------CcHHHHHhcCceeEEc
Q 013835 3 IVGTRG-----DVQPFVAIGKRLQDYGHRVRLATHS-------NFKDFVLTAGLEFYPL 49 (435)
Q Consensus 3 ~~~~~G-----H~~p~~~la~~L~~rGh~V~~~~~~-------~~~~~~~~~g~~~~~i 49 (435)
..|++| --.+...|++.|.++|.+|.|..++ ...-.+.++++++-.+
T Consensus 35 IVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVAGRMPGhMNVLLAEA~VPYd~v 93 (186)
T 2bru_C 35 ITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIV 93 (186)
T ss_dssp EECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSSSSSSSSTHHHHHHHHTCCTTTE
T ss_pred EECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccccCCCcceEEEEecCCCHHHH
Confidence 345565 2357889999999999999999643 3445667777775443
No 180
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=26.80 E-value=52 Score=25.00 Aligned_cols=21 Identities=24% Similarity=0.314 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHHCCCeEEEE
Q 013835 10 VQPFVAIGKRLQDYGHRVRLA 30 (435)
Q Consensus 10 ~~p~~~la~~L~~rGh~V~~~ 30 (435)
+.|++.+++.|.++|.+|+++
T Consensus 30 iaPl~sm~~~l~~~~~~v~l~ 50 (142)
T 3lyu_A 30 IVEVYPIAKAWQEIGNDVTTL 50 (142)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEE
Confidence 689999999999999999988
No 181
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=26.62 E-value=1.1e+02 Score=18.40 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHhc-CHHHHHHHHHHHHHhhc
Q 013835 361 SLPKLINAINFML-DPKVKERAVELAEAMEK 390 (435)
Q Consensus 361 ~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~ 390 (435)
|.+++.+..++.. ||.++.+.+.+++.+..
T Consensus 2 skqEvK~E~Ke~EGdP~iK~~~R~~~~e~a~ 32 (48)
T 3c01_A 2 DKEEVKREMKEQEGNPEVKSKRREVHMEILS 32 (48)
T ss_pred CHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 5688999999999 99999999988888765
No 182
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=26.23 E-value=2e+02 Score=25.05 Aligned_cols=47 Identities=15% Similarity=0.174 Sum_probs=34.0
Q ss_pred ccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcH--------HHHHhcCceeEEc
Q 013835 3 IVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFK--------DFVLTAGLEFYPL 49 (435)
Q Consensus 3 ~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~--------~~~~~~g~~~~~i 49 (435)
..++.|-..-+..||..+..+|.+|.++..+... ...+..|+++++.
T Consensus 105 G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r~~a~~ql~~~~~~~~v~v~~~ 159 (297)
T 1j8m_F 105 GVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGE 159 (297)
T ss_dssp CSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSSSHHHHHHHHHHHHHTCCEECC
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCHHHHHHHHHHhccCCeEEEec
Confidence 3567888899999999999999999999765321 1233456766653
No 183
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=26.04 E-value=58 Score=26.34 Aligned_cols=44 Identities=23% Similarity=0.234 Sum_probs=28.7
Q ss_pred cCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHh-cCceeEE
Q 013835 4 VGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLT-AGLEFYP 48 (435)
Q Consensus 4 ~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~-~g~~~~~ 48 (435)
.|+.| ..=...+.++|+++|++|.++.++...+.+.. .++.+-.
T Consensus 9 TGs~a-a~k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~e~~~~~~~ 53 (189)
T 2ejb_A 9 TGASG-VIYGIKLLQVLEELDFSVDLVISRNAKVVLKEEHSLTFEE 53 (189)
T ss_dssp CSSTT-HHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHC-------
T ss_pred ECHHH-HHHHHHHHHHHHHCCCEEEEEEChhHHHHhhHHhCCCHHH
Confidence 34445 34578899999999999999988877777665 3444433
No 184
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=25.93 E-value=1.4e+02 Score=28.55 Aligned_cols=48 Identities=17% Similarity=0.215 Sum_probs=34.6
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHH--------HHHhcCceeEEc
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKD--------FVLTAGLEFYPL 49 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~--------~~~~~g~~~~~i 49 (435)
+..++.|=..-+..||..|+++|++|.+++.+.+.. .....+++++..
T Consensus 107 vG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r~aa~~qL~~~~~~~~i~v~~~ 162 (504)
T 2j37_W 107 VGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162 (504)
T ss_dssp ECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHTCCEEEC
T ss_pred ECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccchhHHHHHHHHhhccCceEEcc
Confidence 345678888889999999999999999997643321 123456776664
No 185
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=25.69 E-value=69 Score=24.48 Aligned_cols=38 Identities=32% Similarity=0.314 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHCCCeEEEEeCCC------cHHHHHhcCceeEEc
Q 013835 12 PFVAIGKRLQDYGHRVRLATHSN------FKDFVLTAGLEFYPL 49 (435)
Q Consensus 12 p~~~la~~L~~rGh~V~~~~~~~------~~~~~~~~g~~~~~i 49 (435)
......+.|.++||.|.++|... ..+.+...|+.+..+
T Consensus 28 ~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I 71 (142)
T 2obb_A 28 FAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAA 71 (142)
T ss_dssp THHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEE
Confidence 35778888999999999999754 233445667766544
No 186
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=25.52 E-value=94 Score=25.09 Aligned_cols=45 Identities=18% Similarity=0.201 Sum_probs=28.9
Q ss_pred cCCccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEEcc
Q 013835 4 VGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLD 50 (435)
Q Consensus 4 ~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~i~ 50 (435)
+|+.|.+- ..++++|.++||+|+.++...........+++++..+
T Consensus 6 tGatG~iG--~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D 50 (221)
T 3ew7_A 6 IGATGRAG--SRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKD 50 (221)
T ss_dssp ETTTSHHH--HHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECC
T ss_pred EcCCchhH--HHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEecc
Confidence 45555543 5788999999999999986542211111567766654
No 187
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=25.52 E-value=56 Score=27.35 Aligned_cols=21 Identities=24% Similarity=0.180 Sum_probs=17.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCC
Q 013835 13 FVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~ 33 (435)
-.++|++|.++|++|+++..+
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 467899999999999998654
No 188
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=25.47 E-value=71 Score=30.71 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=22.2
Q ss_pred CCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEc
Q 013835 240 SKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINK 277 (435)
Q Consensus 240 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 277 (435)
++++.+-+|+... +.+.+.+++.+..+.+..
T Consensus 11 ~~I~IlD~g~~~~-------~~i~r~lr~~Gv~~~i~p 41 (527)
T 3tqi_A 11 HRILILDFGSQYA-------QLIARRVREIGVYCELMP 41 (527)
T ss_dssp SEEEEEECSCTTH-------HHHHHHHHHHTCEEEEEE
T ss_pred CeEEEEECCCccH-------HHHHHHHHHCCCeEEEEE
Confidence 4588899988642 336777888898877664
No 189
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=24.92 E-value=34 Score=30.61 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEEEeCCchHHHHHHH--------hCCC
Q 013835 257 KMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVHHGGAGTTAAGLR--------AACP 328 (435)
Q Consensus 257 ~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~hgG~~s~~Eal~--------~G~P 328 (435)
+.++.+.+.++..+..+.+...... +.. ... ..+..-..+|++|.-||=||+.|++. .++|
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~~--------~~~--~~~-~~~~~~~~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~p 112 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWEK--------GDA--ARY-VEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPA 112 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCST--------THH--HHH-HHHHHHHTCSEEEEEESHHHHHHHHHHHHHCCSSCCCE
T ss_pred chHHHHHHHHHHcCCcEEEEEecCc--------chH--HHH-HHHHHhcCCCEEEEEccchHHHHHHHHHhhcccCCCCe
Confidence 3556677888877777665432111 000 000 11122356899999999999999853 4679
Q ss_pred EEeecCC
Q 013835 329 TTIVPFF 335 (435)
Q Consensus 329 ~l~~P~~ 335 (435)
+.++|..
T Consensus 113 lgiiP~G 119 (332)
T 2bon_A 113 LGILPLG 119 (332)
T ss_dssp EEEEECS
T ss_pred EEEecCc
Confidence 8899965
No 190
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=24.81 E-value=59 Score=27.26 Aligned_cols=32 Identities=25% Similarity=0.223 Sum_probs=20.0
Q ss_pred ccCcCEEEeC-Cc-chhHHHHH----HHcCCCEEEeec
Q 013835 93 AFKADAIIAN-PP-AYGHVHVA----EALKIPIHIFFT 124 (435)
Q Consensus 93 ~~~pDlVi~d-~~-~~~~~~~A----~~~~iP~v~~~~ 124 (435)
+|+||+||+- +. ..++.-.| ...|+|+|+++-
T Consensus 62 ~~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D 99 (283)
T 1qv9_A 62 DFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGD 99 (283)
T ss_dssp HHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEE
T ss_pred hcCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcC
Confidence 3599999874 22 22233334 336899999864
No 191
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=24.69 E-value=1.5e+02 Score=24.84 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCcH
Q 013835 361 SLPKLINAINFMLDPKVKERAVELAEAMEKEDGV 394 (435)
Q Consensus 361 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~ 394 (435)
+.+++..+-..+-||.++..-.+++|+..+..+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 219 (232)
T 3dfu_A 186 SLDEVIAQYDSINNPGRQRLFRDLARRQAEISRA 219 (232)
T ss_dssp CHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHhcccChhHHHHHHHHHHHHHhhhcc
Confidence 4567776666666777777777777766654433
No 192
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=24.59 E-value=4e+02 Score=24.19 Aligned_cols=106 Identities=10% Similarity=0.025 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCC--ceEEcCCCChhhh---cccccEEEE---eCCchHHHHHHHhCCCEE
Q 013835 259 TQIIVEAFEQTGQRGIINKGWGGLGNLAEPKD--SIYLLDNIPHDWL---FLQCKAVVH---HGGAGTTAAGLRAACPTT 330 (435)
Q Consensus 259 ~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~--~v~~~~~~p~~~~---l~~~~l~I~---hgG~~s~~Eal~~G~P~l 330 (435)
-..++.++++.+.++++.. ..+ .......+ ...+.++.....+ ...+|+++. |-+.. +.+.+..|+|
T Consensus 36 g~~l~~aa~~lG~~v~~~d-~~~-~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~e~e~~~~~-~l~~l~~g~~-- 110 (403)
T 3k5i_A 36 GRMLVESANRLNIQVNVLD-ADN-SPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTAEIEHVDTY-ALEEVASEVK-- 110 (403)
T ss_dssp HHHHHHHHHHHTCEEEEEE-STT-CTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEESSSCSCHH-HHHHHTTTSE--
T ss_pred HHHHHHHHHHCCCEEEEEE-CCC-CcHHHhccccceeecCCCCHHHHHHHHHhCCEEEECCCCCCHH-HHHHHHcCCc--
Confidence 3457888888999988776 322 12222223 4566677776666 577888764 44443 4455555888
Q ss_pred eecC------CCChhhHHHHHHHcCCCCCCCCCCC-C--CHHHHHHHHHH
Q 013835 331 IVPF------FGDQPFWGERVHARGVGPPPIPVDE-F--SLPKLINAINF 371 (435)
Q Consensus 331 ~~P~------~~dQ~~na~~v~~~g~G~~~l~~~~-~--~~~~l~~~i~~ 371 (435)
+.|. ..|...-.+.+++.|+-+ .+... . +.+++.+.+.+
T Consensus 111 v~p~~~a~~~~~dK~~~k~~l~~~Gip~--p~~~~~~~~~~~~~~~~~~~ 158 (403)
T 3k5i_A 111 IEPSWQAIRTIQNKFNQKEHLRKYGIPM--AEHRELVENTPAELAKVGEQ 158 (403)
T ss_dssp ESSCHHHHHHHTSHHHHHHHHHTTTCCB--CCEEEESSCCHHHHHHHHHH
T ss_pred cCcCHHHHHHhcCHHHHHHHHHHCCcCC--CCEEEEcCCCHHHHHHHHHH
Confidence 3342 246666666777766653 21111 1 45666666554
No 193
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=24.51 E-value=2.9e+02 Score=22.59 Aligned_cols=90 Identities=11% Similarity=0.010 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHC--CCeEEEEe-CC-C--cHHHHHhcCceeEEccccccCCCCCCCCCchhhHHHHHHHHHHHHHhhccC
Q 013835 12 PFVAIGKRLQDY--GHRVRLAT-HS-N--FKDFVLTAGLEFYPLDMVKNKGFLPSGPSEIPVQRNQMKEIIYSLLPACRD 85 (435)
Q Consensus 12 p~~~la~~L~~r--Gh~V~~~~-~~-~--~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (435)
-+.+|.+++.+. +|+|..+. .. + ..+..++.|++++.++.. .+.. ...+.. ....
T Consensus 13 nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~-----------~~~~-r~~~~~---~~~~---- 73 (212)
T 1jkx_A 13 NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIAS-----------AFDS-REAYDR---ELIH---- 73 (212)
T ss_dssp HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGG-----------GCSS-HHHHHH---HHHH----
T ss_pred HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcc-----------cccc-hhhccH---HHHH----
Confidence 477788888765 68887664 32 2 345677899999886410 0100 111111 1111
Q ss_pred CCccCCcccCcCEEEeCCcc--hhHHHHHHHcCCCEEEeecc
Q 013835 86 PDLDSGIAFKADAIIANPPA--YGHVHVAEALKIPIHIFFTM 125 (435)
Q Consensus 86 ~~~~~~~~~~pDlVi~d~~~--~~~~~~A~~~~iP~v~~~~~ 125 (435)
.+++.+||+||.-.+. .. ..+-....-.++.+++.
T Consensus 74 ----~l~~~~~Dliv~agy~~il~-~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 74 ----EIDMYAPDVVVLAGFMRILS-PAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ----HHGGGCCSEEEESSCCSCCC-HHHHHHTTTSEEEEESS
T ss_pred ----HHHhcCCCEEEEeChhhhCC-HHHHhhccCCEEEEccC
Confidence 1334599999875332 22 23335556678888753
No 194
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=24.23 E-value=3.3e+02 Score=23.13 Aligned_cols=20 Identities=40% Similarity=0.526 Sum_probs=17.0
Q ss_pred HHHHHHHHHCCCeEEEEeCC
Q 013835 14 VAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 14 ~~la~~L~~rGh~V~~~~~~ 33 (435)
.++|++|.++|++|.++...
T Consensus 23 ~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 23 LAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp HHHHHHHHTTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57899999999999988643
No 195
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=23.94 E-value=30 Score=28.18 Aligned_cols=34 Identities=6% Similarity=0.058 Sum_probs=25.4
Q ss_pred CccchhHHHHHHHHHHHCCCeEEEEeCCCcHHHH
Q 013835 6 TRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFV 39 (435)
Q Consensus 6 ~~GH~~p~~~la~~L~~rGh~V~~~~~~~~~~~~ 39 (435)
|.....-...+.+.|.++|++|.++.++...+.+
T Consensus 17 Gs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 17 GSISSVGISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp SCGGGGGTHHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 3344455789999999999999999876655443
No 196
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=23.57 E-value=83 Score=24.74 Aligned_cols=40 Identities=15% Similarity=0.269 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHHCCCeEEEEeCC-------CcHHHHHhcCceeEEc
Q 013835 10 VQPFVAIGKRLQDYGHRVRLATHS-------NFKDFVLTAGLEFYPL 49 (435)
Q Consensus 10 ~~p~~~la~~L~~rGh~V~~~~~~-------~~~~~~~~~g~~~~~i 49 (435)
-.+...|++.|.++|.+|.|.-++ ...-.+.++++++-.+
T Consensus 40 Q~~v~el~~~L~~~G~~V~faIHPVAGRMPGhmNVLLAEA~VPYd~v 86 (180)
T 1pno_A 40 QHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEV 86 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCTTSTTHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHCCCeEEEEeccccccCCCcceEEEEeeCCCHHHH
Confidence 357889999999999999999754 2334556777765443
No 197
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=23.45 E-value=3.8e+02 Score=25.16 Aligned_cols=33 Identities=12% Similarity=-0.119 Sum_probs=26.6
Q ss_pred ccCCccchhHHHHHHHHHHHC-CCeEEEEeCCCc
Q 013835 3 IVGTRGDVQPFVAIGKRLQDY-GHRVRLATHSNF 35 (435)
Q Consensus 3 ~~~~~GH~~p~~~la~~L~~r-Gh~V~~~~~~~~ 35 (435)
..|+.|=..-++.+|..+..+ |..|.+++.+.-
T Consensus 249 G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s 282 (503)
T 1q57_A 249 SGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEES 282 (503)
T ss_dssp ESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSC
T ss_pred ecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCC
Confidence 456777788889999998877 999999987654
No 198
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.43 E-value=32 Score=28.79 Aligned_cols=29 Identities=17% Similarity=0.400 Sum_probs=25.0
Q ss_pred cccEEEEeCCchHHHHHHHhCCCEEeecCC
Q 013835 306 QCKAVVHHGGAGTTAAGLRAACPTTIVPFF 335 (435)
Q Consensus 306 ~~~l~I~hgG~~s~~Eal~~G~P~l~~P~~ 335 (435)
.+|++|+.||....+..- .++|+|-++..
T Consensus 63 ~~dVIISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 63 RCDAIIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CCSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CCeEEEeCChHHHHHHhh-CCCCEEEecCC
Confidence 589999999998888875 68999999865
No 199
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=23.31 E-value=1.1e+02 Score=22.84 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=29.9
Q ss_pred hCCCEEeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 325 AACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 325 ~G~P~l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
..+|+|++....+. .......+.|+-- .+. +..+.++|.+.|+.++
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~~g~~~-~l~-kP~~~~~L~~~i~~~~ 119 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQDGAYD-FIA-KPFAADRLVQSARRAE 119 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHHTTCCE-EEE-SSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHhcCCCe-EEe-CCCCHHHHHHHHHHHH
Confidence 47899988755443 3344444566542 343 3558899999999987
No 200
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=23.24 E-value=2.9e+02 Score=24.98 Aligned_cols=36 Identities=22% Similarity=0.364 Sum_probs=20.5
Q ss_pred HHHHHHHHCC-CeEEEEeCCCc---------HHHHHhcCceeEEcc
Q 013835 15 AIGKRLQDYG-HRVRLATHSNF---------KDFVLTAGLEFYPLD 50 (435)
Q Consensus 15 ~la~~L~~rG-h~V~~~~~~~~---------~~~~~~~g~~~~~i~ 50 (435)
.+.+.+.+.| .+|.+++.+.. .+.++..|+.+..++
T Consensus 21 ~l~~~l~~~g~~~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~ 66 (386)
T 1rrm_A 21 ALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYD 66 (386)
T ss_dssp GHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHcCCCEEEEEECcchhhchHHHHHHHHHHHcCCeEEEEC
Confidence 4555565556 67877775432 122345678776554
No 201
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=23.09 E-value=86 Score=24.76 Aligned_cols=39 Identities=23% Similarity=0.435 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHHCCCeEEEEeCC-------CcHHHHHhcCceeEE
Q 013835 10 VQPFVAIGKRLQDYGHRVRLATHS-------NFKDFVLTAGLEFYP 48 (435)
Q Consensus 10 ~~p~~~la~~L~~rGh~V~~~~~~-------~~~~~~~~~g~~~~~ 48 (435)
-.+...|++.|.++|.+|.|.-++ ...-.+.++++++-.
T Consensus 39 Q~~v~el~~~L~~~G~~V~faIHPVAGRMPGhMNVLLAEA~VPYd~ 84 (184)
T 1d4o_A 39 QYPIADLVKMLSEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDI 84 (184)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCSSSTTHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHCCCeEEEEeccccccCCCcceEEEEEecCCHHH
Confidence 357889999999999999999754 233455667776543
No 202
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=23.03 E-value=95 Score=27.65 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=26.4
Q ss_pred HHHHHHHHHCCCeEEEE-eC-------CCcHHHHHhcCceeEEcc
Q 013835 14 VAIGKRLQDYGHRVRLA-TH-------SNFKDFVLTAGLEFYPLD 50 (435)
Q Consensus 14 ~~la~~L~~rGh~V~~~-~~-------~~~~~~~~~~g~~~~~i~ 50 (435)
..+.++|.++||+|..+ |. +...+...+.|++++...
T Consensus 35 ~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~ 79 (329)
T 2bw0_A 35 QEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYS 79 (329)
T ss_dssp HHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECS
T ss_pred HHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecC
Confidence 35678898999998766 42 223456678899988875
No 203
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=22.96 E-value=4.6e+02 Score=24.29 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=27.7
Q ss_pred cccCCccchhHHHHHHHHHHHCCCeEEEEeCCC
Q 013835 2 LIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSN 34 (435)
Q Consensus 2 ~~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~~ 34 (435)
..-|+.|=..-++.+|...+.+|..|.|++.+.
T Consensus 203 aG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEm 235 (444)
T 3bgw_A 203 AARPSMGKTAFALKQAKNMSDNDDVVNLHSLEM 235 (444)
T ss_dssp EECSSSSHHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EeCCCCChHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 345788888899999999988899999998654
No 204
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=22.92 E-value=1.9e+02 Score=23.61 Aligned_cols=85 Identities=12% Similarity=-0.056 Sum_probs=54.0
Q ss_pred HHHHHHc--CCCcEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChh--hhcccc
Q 013835 232 LVKWLEA--GSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHD--WLFLQC 307 (435)
Q Consensus 232 l~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~--~~l~~~ 307 (435)
+.+|+.. +++++||..++... ..++.++.+.++|++.+..+.+..-. . .-+.+ +.+..+
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~-~~~~~~~s~~~a~~~lG~~v~~~~i~-------~---------~~~~~~~~~l~~a 80 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVE-EVTFYVEAGKKALESLGLLVEELDIA-------T---------ESLGEITTKLRKN 80 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGC-SCCHHHHHHHHHHHHTTCEEEECCTT-------T---------SCHHHHHHHHHHS
T ss_pred HHHHHHHcCCCEEEEECCCCCCC-CHHHHHHHHHHHHHHcCCeEEEEEec-------C---------CChHHHHHHHHhC
Confidence 4555422 34588998877532 23456777899999999876643100 0 00111 336788
Q ss_pred cEEEEeCCc--------------hHHHHHHHhCCCEEeec
Q 013835 308 KAVVHHGGA--------------GTTAAGLRAACPTTIVP 333 (435)
Q Consensus 308 ~l~I~hgG~--------------~s~~Eal~~G~P~l~~P 333 (435)
|.++--||. ..+.|++..|+|++.+-
T Consensus 81 d~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 81 DFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGES 120 (206)
T ss_dssp SEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEET
T ss_pred CEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEEC
Confidence 888888874 34667778899999875
No 205
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=22.87 E-value=56 Score=29.19 Aligned_cols=82 Identities=11% Similarity=-0.006 Sum_probs=49.1
Q ss_pred cEEEeeCCCCCCChHHHHHHHHHHHHHhCCeEEEEcCCCCCCCCCCCCCceEEcCCCChhhhcccccEEEEeCCchHHHH
Q 013835 242 PIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIYLLDNIPHDWLFLQCKAVVHHGGAGTTAA 321 (435)
Q Consensus 242 ~v~v~~Gs~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~l~I~hgG~~s~~E 321 (435)
.|+++-.+.. ....+.++.+.+.++..+..+.+........ ..+ +..+..-..+|++|.-||=||+.|
T Consensus 28 ~vI~NP~sg~-~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~-a~~----------~~~~~~~~~~d~vvv~GGDGTv~~ 95 (337)
T 2qv7_A 28 RIIYNPTSGK-EQFKRELPDALIKLEKAGYETSAYATEKIGD-ATL----------EAERAMHENYDVLIAAGGDGTLNE 95 (337)
T ss_dssp EEEECTTSTT-SCHHHHHHHHHHHHHHTTEEEEEEECCSTTH-HHH----------HHHHHTTTTCSEEEEEECHHHHHH
T ss_pred EEEECCCCCC-CchHHHHHHHHHHHHHcCCeEEEEEecCcch-HHH----------HHHHHhhcCCCEEEEEcCchHHHH
Confidence 3445543332 2344567778888888777666543221100 000 001112356799999999999999
Q ss_pred HHH------hCCCEEeecCC
Q 013835 322 GLR------AACPTTIVPFF 335 (435)
Q Consensus 322 al~------~G~P~l~~P~~ 335 (435)
++. .++|+.++|..
T Consensus 96 v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 96 VVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp HHHHHTTCSSCCEEEEEECS
T ss_pred HHHHHHhCCCCCcEEEecCC
Confidence 864 36799999965
No 206
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=22.79 E-value=60 Score=28.93 Aligned_cols=23 Identities=13% Similarity=0.144 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCC
Q 013835 11 QPFVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 11 ~p~~~la~~L~~rGh~V~~~~~~ 33 (435)
-++..|.+.|+++|++|.++|..
T Consensus 146 ~~~~~l~~~l~~~G~~v~ivSas 168 (327)
T 4as2_A 146 SGQRELYNKLMENGIEVYVISAA 168 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999999999999999999754
No 207
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=22.55 E-value=1.6e+02 Score=25.98 Aligned_cols=44 Identities=2% Similarity=-0.040 Sum_probs=25.4
Q ss_pred ccchhHHHHHHHHHHHCCCeEEEEe---CCCc-----HHHHHhcCceeEEcc
Q 013835 7 RGDVQPFVAIGKRLQDYGHRVRLAT---HSNF-----KDFVLTAGLEFYPLD 50 (435)
Q Consensus 7 ~GH~~p~~~la~~L~~rGh~V~~~~---~~~~-----~~~~~~~g~~~~~i~ 50 (435)
+|+-.....+.+..+++|.++.+++ .+.. ...+.+.|+++.-+.
T Consensus 128 h~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~ 179 (315)
T 3ecs_A 128 HAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVL 179 (315)
T ss_dssp CSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEEC
T ss_pred cCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEe
Confidence 4444556666667777787666664 2222 223445677776665
No 208
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.54 E-value=54 Score=21.89 Aligned_cols=48 Identities=15% Similarity=0.052 Sum_probs=30.8
Q ss_pred HhCCCEEeecCCCChhhHHHH---HHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 324 RAACPTTIVPFFGDQPFWGER---VHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 324 ~~G~P~l~~P~~~dQ~~na~~---v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
-.|+|++++-....|...-.. ..+.|+.. .+- +..++++|-+.+++.|
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsy-dvl-kstdpeeltqrvrefl 99 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSY-DVL-KSTDPEELTQRVREFL 99 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEE-EEE-ECCCHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcch-hhh-ccCCHHHHHHHHHHHH
Confidence 368999998777666543332 23446663 222 3447899988888865
No 209
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=22.51 E-value=3e+02 Score=23.50 Aligned_cols=24 Identities=13% Similarity=0.004 Sum_probs=17.9
Q ss_pred CcCEEEe--CCcchhHHHHHHHcCCC
Q 013835 95 KADAIIA--NPPAYGHVHVAEALKIP 118 (435)
Q Consensus 95 ~pDlVi~--d~~~~~~~~~A~~~~iP 118 (435)
+||.|++ |..+.+++.+.+..|+|
T Consensus 182 ~~~ai~~~~d~~a~g~~~al~~~G~p 207 (313)
T 2h3h_A 182 DLDAFFGVYAYNGPAQALVVKNAGKV 207 (313)
T ss_dssp TCCEEEECSTTHHHHHHHHHHHTTCT
T ss_pred CceEEEEcCCCccHHHHHHHHHcCCC
Confidence 6799987 45556666778888877
No 210
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=22.39 E-value=58 Score=28.15 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=22.2
Q ss_pred ccCCccchhHHHHHHHHHHHCCCeEEEEeCC
Q 013835 3 IVGTRGDVQPFVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 3 ~~~~~GH~~p~~~la~~L~~rGh~V~~~~~~ 33 (435)
-.|+.|.+- ..|+++|.++||+|+.++..
T Consensus 5 VTGatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 5 VGGGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp EETTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred EECCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 456667654 45789999999999999753
No 211
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=22.31 E-value=85 Score=25.64 Aligned_cols=29 Identities=14% Similarity=-0.129 Sum_probs=17.5
Q ss_pred ccCCccchhHHHHHHHHHHHCCCeEEEEe
Q 013835 3 IVGTRGDVQPFVAIGKRLQDYGHRVRLAT 31 (435)
Q Consensus 3 ~~~~~GH~~p~~~la~~L~~rGh~V~~~~ 31 (435)
+.++-.|-....-++..|..+|++|.++.
T Consensus 95 ~~~gd~H~iG~~~va~~l~~~G~~v~~LG 123 (210)
T 1y80_A 95 TVKGDLHDIGKNLVAMMLESGGFTVYNLG 123 (210)
T ss_dssp EBTTCCCCHHHHHHHHHHHHTTCEEEECC
T ss_pred eCCCcccHHHHHHHHHHHHHCCCEEEECC
Confidence 44555566666666666666666666654
No 212
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=22.13 E-value=2.1e+02 Score=25.64 Aligned_cols=16 Identities=25% Similarity=0.233 Sum_probs=13.5
Q ss_pred HHHHHHcCCCEEEeec
Q 013835 109 VHVAEALKIPIHIFFT 124 (435)
Q Consensus 109 ~~~A~~~~iP~v~~~~ 124 (435)
.++|+.+|||+++...
T Consensus 251 Al~Ak~~~vPfyV~a~ 266 (351)
T 1t5o_A 251 SVVAKHHNIPFYVAAP 266 (351)
T ss_dssp HHHHHHTTCCEEEECC
T ss_pred HHHHHHcCCCEEEeCc
Confidence 4789999999998764
No 213
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=22.07 E-value=83 Score=15.43 Aligned_cols=14 Identities=21% Similarity=0.408 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHhhc
Q 013835 377 VKERAVELAEAMEK 390 (435)
Q Consensus 377 ~~~~~~~~~~~~~~ 390 (435)
++++.+++.+++++
T Consensus 13 lqerlrklrkklrs 26 (27)
T 3twe_A 13 LQERLRKLRKKLRS 26 (27)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 67777777777653
No 214
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=21.91 E-value=3.3e+02 Score=22.23 Aligned_cols=39 Identities=10% Similarity=0.077 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHC--CCeEEEEeCC--C--cHHHHHhcCceeEEcc
Q 013835 12 PFVAIGKRLQDY--GHRVRLATHS--N--FKDFVLTAGLEFYPLD 50 (435)
Q Consensus 12 p~~~la~~L~~r--Gh~V~~~~~~--~--~~~~~~~~g~~~~~i~ 50 (435)
.+.+|.+++.+. +++|..+.+. . ..+...+.|++++.++
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 57 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVIN 57 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEEC
Confidence 455666776654 7898777432 2 2355778899988765
No 215
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=21.71 E-value=3.6e+02 Score=22.61 Aligned_cols=21 Identities=29% Similarity=0.305 Sum_probs=17.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCC
Q 013835 13 FVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~ 33 (435)
-.++|++|.++|++|.++...
T Consensus 42 G~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 42 GAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 357899999999999988763
No 216
>3bzy_A ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3bzl_A 3bzv_A 3bzx_A 3bzo_A 3bzz_A 3c03_B 3c00_A
Probab=21.67 E-value=1.5e+02 Score=18.30 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=27.5
Q ss_pred CCHHHHHHHHHHhc-CHHHHHHHHHHHHHhhc
Q 013835 360 FSLPKLINAINFML-DPKVKERAVELAEAMEK 390 (435)
Q Consensus 360 ~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~ 390 (435)
.|.+++.+..++.. ||.++.+.+.+++.+..
T Consensus 7 MskqEvK~E~Ke~EGdP~iK~r~R~~~re~a~ 38 (54)
T 3bzy_A 7 MSKDEVKREAKDTDGNPEIKGERRRLHSEIQS 38 (54)
T ss_pred CCHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 47899999999999 99999999988888765
No 217
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=21.44 E-value=67 Score=28.35 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=24.7
Q ss_pred HHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeE
Q 013835 14 VAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFY 47 (435)
Q Consensus 14 ~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~ 47 (435)
..+|..|.+.||+|+++..+...+.+.+.|+...
T Consensus 32 ~~~a~~L~~~G~~V~l~~~~~~~~~i~~~g~~~~ 65 (318)
T 3hwr_A 32 CYYGGMLARAGHEVILIARPQHVQAIEATGLRLE 65 (318)
T ss_dssp HHHHHHHHHTTCEEEEECCHHHHHHHHHHCEEEE
T ss_pred HHHHHHHHHCCCeEEEEEcHhHHHHHHhCCeEEE
Confidence 4678899999999999944444566667776654
No 218
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=21.39 E-value=4.3e+02 Score=23.42 Aligned_cols=50 Identities=18% Similarity=0.095 Sum_probs=28.2
Q ss_pred eCCchH-HHHHHHh-------CCCE--EeecCCCChhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 313 HGGAGT-TAAGLRA-------ACPT--TIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 313 hgG~~s-~~Eal~~-------G~P~--l~~P~~~dQ~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
.||+++ +.+.+.. ..|+ +.+|..+-.... .++ .-.|+ +.+.+.+++++++
T Consensus 280 ~Gg~g~~v~~~l~~~~~~~~l~~~v~~ig~~d~~~~~g~--~l~-~~~g~--------~~~~I~~~i~~~l 339 (341)
T 2ozl_B 280 QFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAK--ILE-DNSIP--------QVKDIIFAIKKTL 339 (341)
T ss_dssp TTCHHHHHHHHHHHSTTGGGCSSCCEEECCCSSCCCSSH--HHH-HTTSC--------CHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHhhhcccccCCCEEEEecCCcCCCCcH--HHH-HHhCc--------CHHHHHHHHHHHh
Confidence 478765 5555554 3677 444443322222 232 34454 7899999998865
No 219
>3qi7_A Putative transcriptional regulator; periplasmic binding protein-like, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.86A {Clostridium difficile}
Probab=21.15 E-value=3.3e+02 Score=24.61 Aligned_cols=25 Identities=16% Similarity=-0.041 Sum_probs=19.2
Q ss_pred CcCEEEe--CCcchhHHHHHHHcCCCE
Q 013835 95 KADAIIA--NPPAYGHVHVAEALKIPI 119 (435)
Q Consensus 95 ~pDlVi~--d~~~~~~~~~A~~~~iP~ 119 (435)
+||.|++ |..+.+++.++..+|+.+
T Consensus 225 ~~TAIFatND~mAiG~ikal~e~Gi~V 251 (371)
T 3qi7_A 225 KDINVFGVNEYMDEVILTKALELKYIV 251 (371)
T ss_dssp SCCEEEESSHHHHHHHHHHHHHHCCBB
T ss_pred CCcEEEECCHHHHHHHHHHHHHcCCcc
Confidence 6799997 466677778889998655
No 220
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=21.05 E-value=2.6e+02 Score=22.42 Aligned_cols=22 Identities=14% Similarity=0.303 Sum_probs=19.3
Q ss_pred HHHHHHHHHHCCCeEEEEeCCC
Q 013835 13 FVAIGKRLQDYGHRVRLATHSN 34 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~~~~ 34 (435)
+..+.++|+++|+.+.++|...
T Consensus 55 ~~e~L~~L~~~G~~~~ivTn~~ 76 (211)
T 2gmw_A 55 VIDAMRELKKMGFALVVVTNQS 76 (211)
T ss_dssp HHHHHHHHHHTTCEEEEEEECT
T ss_pred HHHHHHHHHHCCCeEEEEECcC
Confidence 7788899999999999998665
No 221
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.88 E-value=64 Score=28.67 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=20.0
Q ss_pred ccCcCEEEeCCcchhHHHHHHHcCCCEEEee
Q 013835 93 AFKADAIIANPPAYGHVHVAEALKIPIHIFF 123 (435)
Q Consensus 93 ~~~pDlVi~d~~~~~~~~~A~~~~iP~v~~~ 123 (435)
..+||+||..........--+..|+|++.+.
T Consensus 114 al~PDLIi~~~~~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 114 AATPDVVFLPMKLKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp HTCCSEEEEEGGGHHHHHHHHHTTCCEEEEC
T ss_pred hcCCCEEEEeCcchhHHHHHHHcCCCEEEEc
Confidence 4599999986432222223356789999863
No 222
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=20.86 E-value=76 Score=28.21 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=26.4
Q ss_pred HHHHHHHHHCCCeEEEEeCCCcHHHHHhcCceeEE
Q 013835 14 VAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYP 48 (435)
Q Consensus 14 ~~la~~L~~rGh~V~~~~~~~~~~~~~~~g~~~~~ 48 (435)
..+|..|.+.||+|+++..+...+.+.+.|+....
T Consensus 16 ~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~ 50 (335)
T 3ghy_A 16 GYLGARLALAGEAINVLARGATLQALQTAGLRLTE 50 (335)
T ss_dssp HHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEec
Confidence 45788999999999999875444566677877653
No 223
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=20.84 E-value=98 Score=24.94 Aligned_cols=40 Identities=15% Similarity=0.269 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHCCCeEEEEeCC-------CcHHHHHhcCceeEEc
Q 013835 10 VQPFVAIGKRLQDYGHRVRLATHS-------NFKDFVLTAGLEFYPL 49 (435)
Q Consensus 10 ~~p~~~la~~L~~rGh~V~~~~~~-------~~~~~~~~~g~~~~~i 49 (435)
-.+...|++.|.++|.+|.|.-++ ...-.+.++++++-.+
T Consensus 63 Q~~v~el~~~L~~~G~~V~faIHPVAGRMPGhMNVLLAEA~VPYd~v 109 (203)
T 2fsv_C 63 QHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEV 109 (203)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCSSSTTHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHcCCeEEEEecccccCCCCCccEEEEEecCCHHHH
Confidence 357889999999999999999754 2334556777765443
No 224
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=20.80 E-value=1.4e+02 Score=22.65 Aligned_cols=24 Identities=13% Similarity=0.169 Sum_probs=19.6
Q ss_pred cchhHHHHHHHHHHHCCCeEEEEeCC
Q 013835 8 GDVQPFVAIGKRLQDYGHRVRLATHS 33 (435)
Q Consensus 8 GH~~p~~~la~~L~~rGh~V~~~~~~ 33 (435)
|++- ..+++.|.++||+|+++...
T Consensus 12 G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 12 SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 5444 67899999999999999874
No 225
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=20.67 E-value=1.5e+02 Score=26.68 Aligned_cols=27 Identities=22% Similarity=0.202 Sum_probs=19.9
Q ss_pred CcCEEEeCCcchhHHHHHHHcCCCEEEe
Q 013835 95 KADAIIANPPAYGHVHVAEALKIPIHIF 122 (435)
Q Consensus 95 ~pDlVi~d~~~~~~~~~A~~~~iP~v~~ 122 (435)
..|++|+..- ..+..-|-.+|+|+|.+
T Consensus 299 ~ad~~v~~~G-~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 299 TCTAVVHHGG-GGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp TCSEEEECCC-HHHHHHHHHHTCCEEEC
T ss_pred hCCEEEECCC-HHHHHHHHHhCCCEEEc
Confidence 3599997633 23467788999999986
No 226
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=20.61 E-value=2.4e+02 Score=23.76 Aligned_cols=22 Identities=18% Similarity=0.217 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHCCC-eEEEEeCC
Q 013835 12 PFVAIGKRLQDYGH-RVRLATHS 33 (435)
Q Consensus 12 p~~~la~~L~~rGh-~V~~~~~~ 33 (435)
-...+++.|.++|| +|.+++..
T Consensus 114 ~g~~a~~~L~~~G~~~I~~i~~~ 136 (288)
T 3gv0_A 114 YAYEAVERLAQCGRKRIAVIVPP 136 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHCCCCeEEEEcCC
Confidence 35667888999998 56777543
No 227
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=20.55 E-value=1e+02 Score=24.98 Aligned_cols=40 Identities=23% Similarity=0.438 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHHCCCeEEEEeCC-------CcHHHHHhcCceeEEc
Q 013835 10 VQPFVAIGKRLQDYGHRVRLATHS-------NFKDFVLTAGLEFYPL 49 (435)
Q Consensus 10 ~~p~~~la~~L~~rGh~V~~~~~~-------~~~~~~~~~g~~~~~i 49 (435)
-.+...|++.|.++|.+|.|.-++ ...-.+.++++++-.+
T Consensus 62 Q~~v~el~~~L~~~G~~V~faIHPVAGRMPGhMNVLLAEA~VPYd~v 108 (207)
T 1djl_A 62 QYPIADLVKMLTEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIV 108 (207)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCSSSTTHHHHHHHHTTCCGGGE
T ss_pred hHHHHHHHHHHHHCCCeEEEEeCccCCCCCCCCcEEEEEeCCCHHHH
Confidence 356889999999999999999754 2334566777775433
No 228
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=20.52 E-value=3.8e+02 Score=22.40 Aligned_cols=19 Identities=11% Similarity=0.155 Sum_probs=14.0
Q ss_pred HHHHHHHHHHCCCeEEEEe
Q 013835 13 FVAIGKRLQDYGHRVRLAT 31 (435)
Q Consensus 13 ~~~la~~L~~rGh~V~~~~ 31 (435)
+-.....++++|++|++++
T Consensus 20 ~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 20 MAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEE
Confidence 3445566778999998884
No 229
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=20.52 E-value=2.5e+02 Score=25.55 Aligned_cols=32 Identities=22% Similarity=0.058 Sum_probs=22.6
Q ss_pred CcCEEEeC---CcchhHHHHHHHcCCCEEEeeccC
Q 013835 95 KADAIIAN---PPAYGHVHVAEALKIPIHIFFTMP 126 (435)
Q Consensus 95 ~pDlVi~d---~~~~~~~~~A~~~~iP~v~~~~~~ 126 (435)
++|+||.= ...=.+..+|...++|+|.+-++.
T Consensus 106 ~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTTa 140 (387)
T 3uhj_A 106 GSDILVGVGGGKTADTAKIVAIDTGARIVIAPTIA 140 (387)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred CCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCcc
Confidence 78999862 222234677888999999986653
No 230
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.52 E-value=56 Score=27.21 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=15.5
Q ss_pred HHHHHHHHHCCCeEEEE
Q 013835 14 VAIGKRLQDYGHRVRLA 30 (435)
Q Consensus 14 ~~la~~L~~rGh~V~~~ 30 (435)
+.+|..|+++|++|+++
T Consensus 15 L~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLF 31 (336)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 57889999999999999
No 231
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=20.39 E-value=83 Score=25.37 Aligned_cols=30 Identities=17% Similarity=0.059 Sum_probs=22.9
Q ss_pred hhhHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhc
Q 013835 338 QPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML 373 (435)
Q Consensus 338 Q~~na~~v~~~g~G~~~l~~~~~~~~~l~~~i~~ll 373 (435)
....+.+=++.|+|+ .+ |++++.+++.+.+
T Consensus 101 ~id~~~Fe~~cGVGV-~V-----T~EqI~~~V~~~i 130 (187)
T 3tl4_X 101 ASTKMGMNENSGVGI-EI-----TEDQVRNYVMQYI 130 (187)
T ss_dssp GCCHHHHHHTTTTTC-CC-----CHHHHHHHHHHHH
T ss_pred CCCHHHHHHHCCCCe-Ee-----CHHHHHHHHHHHH
Confidence 344455666779998 55 8899999999988
No 232
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=20.13 E-value=2.2e+02 Score=25.01 Aligned_cols=54 Identities=9% Similarity=-0.117 Sum_probs=33.9
Q ss_pred CChhhhcc--cccEEEEeCCc----hHHHHHHHhCCCEEee-cCCCChh---hHHHHHHHcCCC
Q 013835 298 IPHDWLFL--QCKAVVHHGGA----GTTAAGLRAACPTTIV-PFFGDQP---FWGERVHARGVG 351 (435)
Q Consensus 298 ~p~~~~l~--~~~l~I~hgG~----~s~~Eal~~G~P~l~~-P~~~dQ~---~na~~v~~~g~G 351 (435)
-..++++. .+|+++-..-. ..+.+|+.+|+++++= |...+-. .-.+.+++.|+-
T Consensus 57 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~ 120 (329)
T 3evn_A 57 DKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLF 120 (329)
T ss_dssp SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCE
Confidence 45566665 78988865443 4578899999998874 7654322 223344555544
Done!