Query 013836
Match_columns 435
No_of_seqs 122 out of 1419
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 18:01:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013836.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013836hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 6.5E-67 2.2E-71 511.5 33.2 409 12-434 11-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.9E-62 2E-66 485.7 35.2 416 12-435 6-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 2.3E-58 7.9E-63 458.4 41.3 409 13-434 5-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 4.4E-59 1.5E-63 460.6 33.7 408 13-434 6-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 5.1E-56 1.7E-60 439.9 36.2 401 13-433 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 7.6E-43 2.6E-47 343.5 25.9 380 11-433 9-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.9E-42 6.4E-47 338.0 24.9 342 13-431 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1E-39 3.5E-44 320.1 22.1 362 15-432 1-399 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 3.2E-38 1.1E-42 309.6 26.3 367 6-434 12-414 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 3.8E-39 1.3E-43 316.3 19.2 361 15-432 1-400 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 1.6E-37 5.3E-42 303.2 27.1 361 12-434 2-399 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 3.1E-38 1.1E-42 308.3 16.2 357 15-433 1-382 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2.8E-36 9.7E-41 298.0 28.8 359 10-433 16-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 9.6E-36 3.3E-40 293.3 24.9 363 12-432 5-398 (430)
15 2p6p_A Glycosyl transferase; X 100.0 4.6E-35 1.6E-39 284.2 25.2 335 15-432 1-378 (384)
16 4fzr_A SSFS6; structural genom 100.0 6.9E-34 2.4E-38 277.2 19.9 340 10-429 11-396 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 2.7E-33 9.4E-38 273.0 20.9 338 11-433 17-397 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 9.2E-32 3.2E-36 261.5 21.6 339 14-433 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 8.6E-30 3E-34 249.2 22.7 346 7-433 13-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 99.9 3E-26 1E-30 220.0 21.8 118 305-432 232-355 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 3.6E-23 1.2E-27 176.7 12.8 143 266-412 8-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 7.6E-18 2.6E-22 161.5 21.8 115 308-434 237-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.4 1.8E-12 6.1E-17 118.3 16.1 66 308-377 208-274 (282)
24 3c48_A Predicted glycosyltrans 99.4 9E-11 3.1E-15 115.0 27.2 97 307-411 305-409 (438)
25 3okp_A GDP-mannose-dependent a 99.3 1.8E-10 6E-15 111.0 22.2 114 306-435 251-379 (394)
26 3fro_A GLGA glycogen synthase; 99.3 8.8E-10 3E-14 107.6 25.3 112 306-434 309-429 (439)
27 2gek_A Phosphatidylinositol ma 99.2 3.8E-10 1.3E-14 109.2 19.3 113 307-434 262-382 (406)
28 2jzc_A UDP-N-acetylglucosamine 99.2 2.7E-12 9.1E-17 112.5 2.5 76 309-391 115-196 (224)
29 2r60_A Glycosyl transferase, g 99.1 2.5E-08 8.7E-13 99.3 24.8 80 307-394 334-424 (499)
30 2jjm_A Glycosyl transferase, g 99.1 2.6E-08 8.9E-13 96.0 23.9 113 307-434 266-384 (394)
31 3ot5_A UDP-N-acetylglucosamine 99.1 1.5E-09 5E-14 105.1 13.7 108 308-432 282-392 (403)
32 2iw1_A Lipopolysaccharide core 99.0 2.1E-07 7.3E-12 88.6 26.8 88 307-404 252-344 (374)
33 1vgv_A UDP-N-acetylglucosamine 99.0 1.6E-09 5.3E-14 104.1 11.7 110 308-434 263-375 (384)
34 1v4v_A UDP-N-acetylglucosamine 98.9 4.7E-09 1.6E-13 100.5 12.3 108 308-432 255-365 (376)
35 3beo_A UDP-N-acetylglucosamine 98.9 3.3E-09 1.1E-13 101.5 9.8 109 308-433 263-374 (375)
36 3dzc_A UDP-N-acetylglucosamine 98.9 7.9E-09 2.7E-13 99.7 12.1 105 307-428 287-394 (396)
37 2iuy_A Avigt4, glycosyltransfe 98.9 6.2E-09 2.1E-13 98.3 10.9 81 304-393 208-307 (342)
38 2x6q_A Trehalose-synthase TRET 98.9 1E-07 3.5E-12 92.4 19.0 112 307-435 292-414 (416)
39 3s28_A Sucrose synthase 1; gly 98.6 1.7E-06 5.7E-11 90.1 19.1 81 307-395 639-735 (816)
40 3oy2_A Glycosyltransferase B73 98.3 1.8E-05 6.3E-10 76.3 17.3 109 310-434 256-389 (413)
41 2hy7_A Glucuronosyltransferase 98.2 8.3E-05 2.8E-09 71.7 19.9 76 306-395 263-353 (406)
42 1rzu_A Glycogen synthase 1; gl 98.2 4.3E-05 1.5E-09 75.5 18.3 110 306-433 344-473 (485)
43 2f9f_A First mannosyl transfer 98.0 7.8E-06 2.7E-10 69.1 7.0 93 306-409 76-175 (177)
44 3qhp_A Type 1 capsular polysac 97.3 0.00051 1.8E-08 56.8 7.3 94 306-409 54-156 (166)
45 2bfw_A GLGA glycogen synthase; 97.3 0.00071 2.4E-08 57.8 8.0 77 309-394 96-181 (200)
46 2xci_A KDO-transferase, 3-deox 97.3 0.00081 2.8E-08 63.9 9.0 97 309-412 261-364 (374)
47 3rhz_A GTF3, nucleotide sugar 97.2 0.00066 2.3E-08 63.5 7.5 109 309-430 215-335 (339)
48 2vsy_A XCC0866; transferase, g 97.2 0.0014 4.6E-08 66.0 10.4 116 308-433 434-557 (568)
49 4hwg_A UDP-N-acetylglucosamine 97.0 0.00021 7.2E-09 68.2 2.3 108 308-432 263-374 (385)
50 2qzs_A Glycogen synthase; glyc 96.1 0.036 1.2E-06 54.3 11.2 111 306-433 345-474 (485)
51 4gyw_A UDP-N-acetylglucosamine 95.8 0.054 1.9E-06 55.9 11.6 117 307-433 579-703 (723)
52 2x0d_A WSAF; GT4 family, trans 94.8 0.012 4.1E-07 56.6 2.7 85 307-403 294-385 (413)
53 3q3e_A HMW1C-like glycosyltran 94.3 0.08 2.7E-06 52.9 7.2 91 306-404 497-595 (631)
54 3tov_A Glycosyl transferase fa 92.9 0.5 1.7E-05 44.0 9.9 107 11-145 5-115 (349)
55 1psw_A ADP-heptose LPS heptosy 91.2 0.41 1.4E-05 44.3 7.1 103 15-145 1-106 (348)
56 3vue_A GBSS-I, granule-bound s 90.5 0.17 5.7E-06 50.3 3.9 82 305-393 379-476 (536)
57 2phj_A 5'-nucleotidase SURE; S 89.2 6.5 0.00022 34.3 12.4 38 15-54 2-39 (251)
58 1uqt_A Alpha, alpha-trehalose- 88.7 2.8 9.5E-05 40.8 10.9 108 310-434 333-453 (482)
59 2x0d_A WSAF; GT4 family, trans 87.4 0.28 9.5E-06 46.9 2.8 39 13-51 45-88 (413)
60 3vue_A GBSS-I, granule-bound s 86.6 2.7 9.2E-05 41.6 9.6 39 12-52 7-53 (536)
61 2qzs_A Glycogen synthase; glyc 85.0 0.74 2.5E-05 44.7 4.6 37 15-51 1-43 (485)
62 1j9j_A Stationary phase surviV 83.7 14 0.00049 32.1 11.6 37 15-54 1-38 (247)
63 1ccw_A Protein (glutamate muta 81.6 2.1 7.2E-05 33.7 5.1 40 12-51 1-40 (137)
64 3t5t_A Putative glycosyltransf 81.6 12 0.00041 36.4 11.4 109 309-433 353-471 (496)
65 3fgn_A Dethiobiotin synthetase 79.2 1.3 4.4E-05 39.0 3.4 38 13-50 24-63 (251)
66 4hwg_A UDP-N-acetylglucosamine 77.5 2.5 8.5E-05 39.8 5.1 113 14-146 9-123 (385)
67 2wqk_A 5'-nucleotidase SURE; S 77.4 13 0.00044 32.5 9.3 37 15-54 2-39 (251)
68 2gt1_A Lipopolysaccharide hept 76.3 3.9 0.00013 37.2 6.0 49 15-63 1-51 (326)
69 3nb0_A Glycogen [starch] synth 76.3 10 0.00035 38.4 9.2 46 308-355 490-551 (725)
70 4dzz_A Plasmid partitioning pr 76.0 24 0.00082 29.1 10.6 38 15-52 1-40 (206)
71 3zzm_A Bifunctional purine bio 74.4 2.7 9.2E-05 40.4 4.3 104 9-127 4-110 (523)
72 3mc3_A DSRE/DSRF-like family p 71.7 5.7 0.00019 31.0 5.0 37 14-50 15-54 (134)
73 3zqu_A Probable aromatic acid 71.2 5.9 0.0002 33.6 5.3 38 13-51 3-40 (209)
74 4b4o_A Epimerase family protei 71.1 4 0.00014 36.5 4.6 32 15-50 1-32 (298)
75 3auf_A Glycinamide ribonucleot 69.6 25 0.00087 30.1 9.1 104 14-149 22-132 (229)
76 1g5t_A COB(I)alamin adenosyltr 69.1 13 0.00045 31.1 6.9 99 14-130 28-131 (196)
77 3bfv_A CAPA1, CAPB2, membrane 69.1 34 0.0012 30.1 10.2 40 14-53 81-122 (271)
78 1evy_A Glycerol-3-phosphate de 69.0 2.5 8.4E-05 39.4 2.8 45 1-50 1-46 (366)
79 1mvl_A PPC decarboxylase athal 69.0 6.4 0.00022 33.4 5.0 40 11-52 16-55 (209)
80 1id1_A Putative potassium chan 68.5 4 0.00014 32.4 3.6 35 12-51 1-35 (153)
81 3la6_A Tyrosine-protein kinase 68.2 31 0.0011 30.6 9.8 40 14-53 91-132 (286)
82 1sbz_A Probable aromatic acid 68.0 6.5 0.00022 33.0 4.9 36 15-51 1-37 (197)
83 3lqk_A Dipicolinate synthase s 67.6 6.6 0.00022 33.1 4.8 40 12-52 5-45 (201)
84 2yxb_A Coenzyme B12-dependent 67.1 5.4 0.00018 32.3 4.1 39 13-51 17-55 (161)
85 3qjg_A Epidermin biosynthesis 66.3 7.8 0.00027 31.8 4.9 37 15-52 6-42 (175)
86 4gi5_A Quinone reductase; prot 65.8 9.4 0.00032 34.0 5.7 46 5-50 13-61 (280)
87 3vot_A L-amino acid ligase, BL 65.3 53 0.0018 30.8 11.5 35 13-52 4-38 (425)
88 3cio_A ETK, tyrosine-protein k 64.8 29 0.001 31.0 9.0 40 14-53 103-144 (299)
89 3mcu_A Dipicolinate synthase, 64.7 7.2 0.00025 33.0 4.5 39 12-51 3-42 (207)
90 1p3y_1 MRSD protein; flavoprot 64.4 6.5 0.00022 32.9 4.1 39 12-51 6-44 (194)
91 3gpi_A NAD-dependent epimerase 64.0 7.8 0.00027 34.3 5.0 35 12-51 1-35 (286)
92 1hdo_A Biliverdin IX beta redu 62.8 17 0.00059 29.8 6.8 36 12-51 1-36 (206)
93 1kjn_A MTH0777; hypotethical p 60.9 12 0.00041 29.5 4.7 38 14-51 6-45 (157)
94 2i2x_B MTAC, methyltransferase 60.1 13 0.00045 32.6 5.6 40 12-51 121-160 (258)
95 3ty2_A 5'-nucleotidase SURE; s 59.4 14 0.00048 32.4 5.5 42 11-54 8-49 (261)
96 1y80_A Predicted cobalamin bin 59.4 11 0.00037 31.8 4.8 39 13-51 87-125 (210)
97 3q0i_A Methionyl-tRNA formyltr 58.8 15 0.00052 33.3 5.9 37 12-53 5-41 (318)
98 2g1u_A Hypothetical protein TM 58.5 11 0.00039 29.8 4.6 33 14-51 19-51 (155)
99 1qkk_A DCTD, C4-dicarboxylate 58.5 32 0.0011 26.6 7.3 64 345-413 74-137 (155)
100 2vsy_A XCC0866; transferase, g 58.3 13 0.00046 36.5 6.0 42 10-51 201-246 (568)
101 4ds3_A Phosphoribosylglycinami 57.6 31 0.0011 29.1 7.3 108 11-149 4-117 (209)
102 2bw0_A 10-FTHFDH, 10-formyltet 57.1 17 0.00059 33.1 6.0 104 12-150 20-131 (329)
103 2ywr_A Phosphoribosylglycinami 56.5 32 0.0011 29.2 7.2 103 15-149 2-111 (216)
104 1ehi_A LMDDL2, D-alanine:D-lac 56.2 10 0.00035 35.3 4.5 40 12-51 1-45 (377)
105 2r85_A PURP protein PF1517; AT 55.8 11 0.00037 34.2 4.5 32 14-51 2-33 (334)
106 1qzu_A Hypothetical protein MD 55.0 12 0.0004 31.7 4.2 40 12-52 17-57 (206)
107 3dm5_A SRP54, signal recogniti 54.6 39 0.0013 32.2 8.2 40 14-53 100-139 (443)
108 2vo1_A CTP synthase 1; pyrimid 54.3 13 0.00046 32.5 4.4 45 9-53 17-64 (295)
109 3e8x_A Putative NAD-dependent 53.8 14 0.00048 31.4 4.7 38 10-51 17-54 (236)
110 2lnd_A De novo designed protei 53.6 35 0.0012 23.4 5.5 48 345-393 50-100 (112)
111 2r8r_A Sensor protein; KDPD, P 53.5 19 0.00066 30.8 5.3 40 13-52 5-44 (228)
112 2ejb_A Probable aromatic acid 52.3 25 0.00085 29.2 5.7 36 15-51 2-37 (189)
113 3ezx_A MMCP 1, monomethylamine 52.1 19 0.00063 30.6 5.0 40 12-51 90-129 (215)
114 3av3_A Phosphoribosylglycinami 51.8 57 0.002 27.4 8.1 103 15-149 4-113 (212)
115 2vqe_B 30S ribosomal protein S 51.0 25 0.00084 30.7 5.6 34 118-151 157-192 (256)
116 1z82_A Glycerol-3-phosphate de 51.0 10 0.00036 34.6 3.5 42 3-50 4-45 (335)
117 1lss_A TRK system potassium up 50.7 14 0.00047 28.2 3.8 33 13-50 3-35 (140)
118 1e4e_A Vancomycin/teicoplanin 50.0 12 0.00041 34.3 3.8 40 12-51 1-44 (343)
119 1vkz_A Phosphoribosylamine--gl 49.3 7.7 0.00026 36.7 2.4 41 2-48 3-44 (412)
120 3kcq_A Phosphoribosylglycinami 48.9 36 0.0012 28.9 6.2 101 13-149 7-113 (215)
121 2iz6_A Molybdenum cofactor car 48.8 21 0.00071 29.3 4.6 77 313-394 94-174 (176)
122 2hy5_A Putative sulfurtransfer 48.8 23 0.00079 27.1 4.7 37 15-51 1-41 (130)
123 1bg6_A N-(1-D-carboxylethyl)-L 48.8 12 0.00041 34.4 3.6 34 12-50 2-35 (359)
124 3kjh_A CO dehydrogenase/acetyl 47.1 14 0.00049 31.6 3.6 39 15-53 1-39 (254)
125 2i87_A D-alanine-D-alanine lig 46.6 10 0.00036 35.0 2.8 40 12-51 1-44 (364)
126 2ew2_A 2-dehydropantoate 2-red 46.2 13 0.00046 33.2 3.5 33 13-50 2-34 (316)
127 3ghy_A Ketopantoate reductase 46.1 12 0.00041 34.2 3.1 34 12-50 1-34 (335)
128 3kkl_A Probable chaperone prot 45.9 34 0.0012 29.6 5.8 40 12-51 1-51 (244)
129 3dhn_A NAD-dependent epimerase 45.8 16 0.00054 30.8 3.7 33 15-51 5-37 (227)
130 2pn1_A Carbamoylphosphate synt 45.2 26 0.00087 31.6 5.2 34 12-51 2-37 (331)
131 1e2b_A Enzyme IIB-cellobiose; 45.2 37 0.0013 25.0 5.1 40 12-51 1-40 (106)
132 2raf_A Putative dinucleotide-b 45.0 31 0.001 28.9 5.3 32 14-50 19-50 (209)
133 2q5c_A NTRC family transcripti 44.5 26 0.00089 29.2 4.7 43 99-151 129-171 (196)
134 1g63_A Epidermin modifying enz 44.2 19 0.00066 29.6 3.7 37 15-52 3-39 (181)
135 3i6i_A Putative leucoanthocyan 44.0 18 0.00062 32.9 4.0 37 11-51 7-43 (346)
136 3pdi_B Nitrogenase MOFE cofact 44.0 97 0.0033 29.6 9.2 87 14-146 313-399 (458)
137 3l7i_A Teichoic acid biosynthe 43.7 11 0.00037 38.7 2.7 108 315-433 606-719 (729)
138 3of5_A Dethiobiotin synthetase 43.4 23 0.00079 30.3 4.3 38 13-50 2-41 (228)
139 1jkx_A GART;, phosphoribosylgl 43.4 1.2E+02 0.004 25.5 8.7 103 15-149 1-110 (212)
140 3qvo_A NMRA family protein; st 41.9 39 0.0013 28.6 5.7 34 15-51 23-57 (236)
141 2bgk_A Rhizome secoisolaricire 41.6 37 0.0013 29.5 5.5 47 1-50 1-48 (278)
142 2jk1_A HUPR, hydrogenase trans 41.1 79 0.0027 23.6 6.9 62 345-410 71-132 (139)
143 1yrb_A ATP(GTP)binding protein 40.9 53 0.0018 28.2 6.5 53 1-54 1-53 (262)
144 3i12_A D-alanine-D-alanine lig 40.6 18 0.00062 33.5 3.4 40 12-51 1-44 (364)
145 1jx7_A Hypothetical protein YC 40.2 24 0.00082 26.1 3.5 26 26-51 16-43 (117)
146 1qyd_A Pinoresinol-lariciresin 40.0 27 0.00093 31.0 4.5 34 14-51 4-37 (313)
147 1mio_A Nitrogenase molybdenum 39.9 83 0.0028 30.8 8.1 35 14-53 335-369 (533)
148 2b8t_A Thymidine kinase; deoxy 39.9 1.7E+02 0.0058 24.7 9.3 37 15-51 12-49 (223)
149 3qxc_A Dethiobiotin synthetase 39.9 28 0.00096 30.1 4.3 40 11-50 17-58 (242)
150 3eag_A UDP-N-acetylmuramate:L- 39.3 30 0.001 31.4 4.6 33 14-50 4-36 (326)
151 2gk4_A Conserved hypothetical 38.4 53 0.0018 28.1 5.7 26 25-52 28-53 (232)
152 2i2c_A Probable inorganic poly 37.8 13 0.00045 32.9 1.9 53 324-394 35-93 (272)
153 2xj4_A MIPZ; replication, cell 37.7 34 0.0012 30.2 4.7 41 12-52 1-43 (286)
154 3hwr_A 2-dehydropantoate 2-red 37.6 22 0.00076 32.1 3.5 33 11-48 16-48 (318)
155 2bon_A Lipid kinase; DAG kinas 37.6 33 0.0011 31.2 4.6 46 5-50 19-65 (332)
156 1rw7_A YDR533CP; alpha-beta sa 37.2 59 0.002 27.9 6.0 38 14-51 3-51 (243)
157 4eg0_A D-alanine--D-alanine li 37.2 44 0.0015 29.9 5.4 39 12-50 11-53 (317)
158 3e5n_A D-alanine-D-alanine lig 36.9 22 0.00076 33.2 3.4 41 11-51 19-63 (386)
159 1gsa_A Glutathione synthetase; 36.2 32 0.0011 30.5 4.3 37 15-51 2-41 (316)
160 2d1p_A TUSD, hypothetical UPF0 36.2 57 0.0019 25.4 5.1 37 14-50 12-52 (140)
161 3llv_A Exopolyphosphatase-rela 36.1 22 0.00076 27.3 2.8 33 14-51 6-38 (141)
162 2pzm_A Putative nucleotide sug 35.8 38 0.0013 30.4 4.8 36 11-50 17-52 (330)
163 3tqr_A Phosphoribosylglycinami 35.6 82 0.0028 26.6 6.4 107 13-149 4-114 (215)
164 3dfu_A Uncharacterized protein 35.4 27 0.00092 30.0 3.4 33 13-50 5-37 (232)
165 4dll_A 2-hydroxy-3-oxopropiona 35.4 42 0.0014 30.2 5.0 33 13-50 30-62 (320)
166 3ew7_A LMO0794 protein; Q8Y8U8 35.2 37 0.0013 28.1 4.4 33 15-51 1-33 (221)
167 2q62_A ARSH; alpha/beta, flavo 35.1 54 0.0019 28.3 5.4 44 7-50 27-73 (247)
168 1u0t_A Inorganic polyphosphate 34.9 16 0.00056 32.9 2.1 32 321-354 72-107 (307)
169 1oi4_A Hypothetical protein YH 34.8 1.2E+02 0.004 24.8 7.3 38 14-52 23-60 (193)
170 3h2s_A Putative NADH-flavin re 34.7 38 0.0013 28.2 4.4 33 15-51 1-33 (224)
171 1p9o_A Phosphopantothenoylcyst 34.7 29 0.00098 31.4 3.6 23 30-52 67-89 (313)
172 3orf_A Dihydropteridine reduct 34.3 40 0.0014 29.0 4.5 33 15-50 22-54 (251)
173 1yt5_A Inorganic polyphosphate 34.3 15 0.0005 32.3 1.6 54 323-394 40-96 (258)
174 2qs7_A Uncharacterized protein 34.3 48 0.0016 25.9 4.5 35 17-51 11-45 (144)
175 2w36_A Endonuclease V; hypoxan 34.2 26 0.00089 29.9 3.0 32 118-149 102-140 (225)
176 3end_A Light-independent proto 34.0 42 0.0014 29.9 4.7 39 15-53 42-80 (307)
177 3k9g_A PF-32 protein; ssgcid, 33.8 39 0.0013 29.3 4.4 46 7-53 19-66 (267)
178 2x4g_A Nucleoside-diphosphate- 33.8 40 0.0014 30.3 4.6 36 12-51 11-46 (342)
179 4g65_A TRK system potassium up 33.7 12 0.00042 36.0 1.1 34 13-51 2-35 (461)
180 3k96_A Glycerol-3-phosphate de 33.6 25 0.00087 32.4 3.2 34 13-51 28-61 (356)
181 3kcn_A Adenylate cyclase homol 33.6 93 0.0032 23.6 6.3 63 345-412 75-139 (151)
182 1meo_A Phosophoribosylglycinam 33.4 1.5E+02 0.0053 24.7 7.8 103 15-149 1-110 (209)
183 4fu0_A D-alanine--D-alanine li 33.3 28 0.00095 32.0 3.4 39 12-50 1-43 (357)
184 4huj_A Uncharacterized protein 33.2 18 0.00062 30.6 2.0 34 12-50 21-54 (220)
185 2vrn_A Protease I, DR1199; cys 33.2 92 0.0032 25.2 6.4 40 11-51 6-45 (190)
186 3da8_A Probable 5'-phosphoribo 32.7 94 0.0032 26.2 6.3 115 267-408 79-195 (215)
187 1iow_A DD-ligase, DDLB, D-ALA\ 32.5 55 0.0019 28.9 5.2 38 14-51 2-43 (306)
188 2gkg_A Response regulator homo 32.4 57 0.002 23.6 4.6 47 345-394 79-125 (127)
189 1e6u_A GDP-fucose synthetase; 32.4 29 0.001 30.9 3.4 35 12-50 1-35 (321)
190 2an1_A Putative kinase; struct 32.4 19 0.00065 32.1 2.1 32 321-354 60-95 (292)
191 2pju_A Propionate catabolism o 32.3 45 0.0015 28.5 4.3 40 99-148 141-180 (225)
192 3l77_A Short-chain alcohol deh 32.2 50 0.0017 27.8 4.7 33 15-50 2-34 (235)
193 3to5_A CHEY homolog; alpha(5)b 32.1 69 0.0024 24.6 5.1 47 345-393 86-132 (134)
194 3rfo_A Methionyl-tRNA formyltr 31.8 61 0.0021 29.3 5.3 36 13-53 3-38 (317)
195 2iz1_A 6-phosphogluconate dehy 31.7 27 0.00091 33.7 3.1 35 11-50 2-36 (474)
196 3lrx_A Putative hydrogenase; a 31.7 40 0.0014 26.8 3.7 34 14-50 23-56 (158)
197 1qyc_A Phenylcoumaran benzylic 31.7 36 0.0012 30.1 3.8 32 15-50 5-36 (308)
198 4e5v_A Putative THUA-like prot 31.6 54 0.0019 29.0 4.9 39 12-51 2-43 (281)
199 3ruf_A WBGU; rossmann fold, UD 31.6 41 0.0014 30.4 4.3 34 14-51 25-58 (351)
200 4e3z_A Putative oxidoreductase 31.5 52 0.0018 28.6 4.8 37 11-50 22-58 (272)
201 3rkr_A Short chain oxidoreduct 31.5 57 0.0019 28.2 5.0 32 16-50 30-61 (262)
202 2zyd_A 6-phosphogluconate dehy 31.5 24 0.00084 34.1 2.8 40 6-50 7-46 (480)
203 3doj_A AT3G25530, dehydrogenas 31.5 39 0.0013 30.3 4.0 33 13-50 20-52 (310)
204 4gbj_A 6-phosphogluconate dehy 31.2 69 0.0024 28.5 5.6 34 11-50 3-36 (297)
205 1fmt_A Methionyl-tRNA FMet for 31.1 45 0.0015 30.1 4.3 35 13-52 2-36 (314)
206 4hb9_A Similarities with proba 31.0 31 0.0011 31.8 3.5 31 15-50 2-32 (412)
207 3sju_A Keto reductase; short-c 31.0 48 0.0017 29.0 4.5 37 11-50 20-56 (279)
208 3m6m_D Sensory/regulatory prot 30.5 65 0.0022 24.4 4.8 39 8-50 8-46 (143)
209 3enk_A UDP-glucose 4-epimerase 30.5 45 0.0015 30.0 4.3 33 14-50 5-37 (341)
210 1vl8_A Gluconate 5-dehydrogena 30.5 54 0.0018 28.5 4.7 33 15-50 21-53 (267)
211 2a33_A Hypothetical protein; s 30.3 64 0.0022 27.3 4.9 39 12-50 10-53 (215)
212 2zat_A Dehydrogenase/reductase 30.3 54 0.0019 28.2 4.7 36 11-50 11-46 (260)
213 4e21_A 6-phosphogluconate dehy 30.3 36 0.0012 31.4 3.6 34 12-50 20-53 (358)
214 2vns_A Metalloreductase steap3 30.2 32 0.0011 28.9 3.1 36 10-50 24-59 (215)
215 4id9_A Short-chain dehydrogena 30.2 33 0.0011 31.0 3.3 34 14-51 19-52 (347)
216 2bru_C NAD(P) transhydrogenase 30.1 54 0.0018 26.5 4.0 38 14-51 30-70 (186)
217 2c5m_A CTP synthase; cytidine 30.0 36 0.0012 29.6 3.2 40 13-52 21-63 (294)
218 3dqp_A Oxidoreductase YLBE; al 29.8 45 0.0015 27.7 4.0 33 15-51 1-33 (219)
219 3ono_A Ribose/galactose isomer 29.7 49 0.0017 27.9 3.9 38 13-50 2-41 (214)
220 3ftp_A 3-oxoacyl-[acyl-carrier 29.7 62 0.0021 28.2 4.9 33 15-50 28-60 (270)
221 2rhc_B Actinorhodin polyketide 29.6 74 0.0025 27.7 5.5 32 16-50 23-54 (277)
222 2a5l_A Trp repressor binding p 29.6 65 0.0022 26.3 4.9 39 12-50 3-42 (200)
223 3bul_A Methionine synthase; tr 29.6 54 0.0018 32.4 4.8 39 13-51 97-135 (579)
224 3qrx_B Melittin; calcium-bindi 29.6 11 0.00038 19.3 -0.0 17 335-351 1-17 (26)
225 3sty_A Methylketone synthase 1 29.6 62 0.0021 27.1 5.0 37 13-50 11-47 (267)
226 3fwz_A Inner membrane protein 29.5 32 0.0011 26.5 2.7 33 14-51 7-39 (140)
227 2c5a_A GDP-mannose-3', 5'-epim 29.5 1.2E+02 0.0041 27.7 7.2 34 14-51 29-62 (379)
228 2wm3_A NMRA-like family domain 29.5 39 0.0013 29.8 3.6 33 15-51 6-39 (299)
229 2z1m_A GDP-D-mannose dehydrata 29.5 46 0.0016 29.9 4.2 35 12-50 1-35 (345)
230 1rkx_A CDP-glucose-4,6-dehydra 29.5 46 0.0016 30.2 4.3 36 12-51 7-42 (357)
231 4hn9_A Iron complex transport 29.5 90 0.0031 28.1 6.2 38 105-149 109-146 (335)
232 3f67_A Putative dienelactone h 29.4 67 0.0023 26.5 5.1 37 14-50 31-67 (241)
233 1ks9_A KPA reductase;, 2-dehyd 29.4 37 0.0013 29.8 3.5 31 15-50 1-31 (291)
234 3ius_A Uncharacterized conserv 29.1 49 0.0017 28.8 4.2 32 15-51 6-37 (286)
235 3l4b_C TRKA K+ channel protien 29.1 23 0.00078 29.8 1.9 32 15-51 1-32 (218)
236 3c1o_A Eugenol synthase; pheny 29.0 56 0.0019 29.1 4.7 33 15-51 5-37 (321)
237 1mkz_A Molybdenum cofactor bio 28.4 1E+02 0.0036 24.7 5.8 41 10-50 6-49 (172)
238 1uzm_A 3-oxoacyl-[acyl-carrier 28.3 85 0.0029 26.7 5.6 43 4-50 5-47 (247)
239 2b69_A UDP-glucuronate decarbo 28.3 54 0.0018 29.5 4.5 35 12-50 25-59 (343)
240 1dhr_A Dihydropteridine reduct 28.3 63 0.0022 27.4 4.7 35 13-50 5-39 (241)
241 3lyu_A Putative hydrogenase; t 28.3 49 0.0017 25.7 3.6 34 14-50 18-51 (142)
242 2rjn_A Response regulator rece 27.9 25 0.00086 27.2 1.9 62 345-411 78-140 (154)
243 1meo_A Phosophoribosylglycinam 27.9 1.2E+02 0.004 25.4 6.1 112 269-407 71-184 (209)
244 2lpm_A Two-component response 27.9 61 0.0021 24.5 4.0 40 101-147 42-86 (123)
245 3r5x_A D-alanine--D-alanine li 27.8 31 0.0011 30.7 2.7 39 13-51 2-44 (307)
246 2a3d_A Protein (de novo three- 27.7 78 0.0027 20.0 3.6 32 397-432 4-35 (73)
247 3i83_A 2-dehydropantoate 2-red 27.7 41 0.0014 30.3 3.5 32 15-51 3-34 (320)
248 3hn2_A 2-dehydropantoate 2-red 27.7 45 0.0015 29.9 3.7 32 15-51 3-34 (312)
249 2fb6_A Conserved hypothetical 27.6 49 0.0017 24.9 3.3 36 15-50 8-47 (117)
250 3guy_A Short-chain dehydrogena 27.6 49 0.0017 27.9 3.8 33 15-50 1-33 (230)
251 2ixd_A LMBE-related protein; h 27.4 56 0.0019 28.2 4.1 39 12-51 1-40 (242)
252 2bi7_A UDP-galactopyranose mut 27.4 43 0.0015 31.1 3.7 35 12-51 1-35 (384)
253 3k3p_A D-alanine--D-alanine li 26.8 40 0.0014 31.4 3.3 42 10-51 33-78 (383)
254 3r6d_A NAD-dependent epimerase 26.8 73 0.0025 26.4 4.8 34 15-51 5-39 (221)
255 3o1l_A Formyltetrahydrofolate 26.7 2.2E+02 0.0076 25.3 8.0 105 13-149 104-212 (302)
256 3tqq_A Methionyl-tRNA formyltr 26.7 70 0.0024 28.8 4.7 35 14-53 2-36 (314)
257 2rir_A Dipicolinate synthase, 26.6 73 0.0025 28.3 4.9 33 12-49 5-37 (300)
258 3dtt_A NADP oxidoreductase; st 26.5 51 0.0018 28.3 3.8 37 9-50 14-50 (245)
259 3dqz_A Alpha-hydroxynitrIle ly 26.4 42 0.0015 28.1 3.2 35 16-50 5-39 (258)
260 3ab1_A Ferredoxin--NADP reduct 26.3 39 0.0013 30.7 3.2 45 1-50 1-45 (360)
261 2l2q_A PTS system, cellobiose- 26.2 83 0.0028 23.1 4.4 37 14-50 4-40 (109)
262 3sbx_A Putative uncharacterize 26.2 94 0.0032 25.6 5.1 36 14-50 13-52 (189)
263 1ydh_A AT5G11950; structural g 26.2 81 0.0028 26.6 4.8 38 13-50 7-49 (216)
264 1zi8_A Carboxymethylenebutenol 26.0 85 0.0029 25.7 5.1 37 14-50 27-63 (236)
265 1fjh_A 3alpha-hydroxysteroid d 25.9 70 0.0024 27.3 4.6 33 15-50 1-33 (257)
266 3cky_A 2-hydroxymethyl glutara 25.9 70 0.0024 28.2 4.7 33 13-50 3-35 (301)
267 3qha_A Putative oxidoreductase 25.8 39 0.0013 30.0 2.9 32 14-50 15-46 (296)
268 2gdz_A NAD+-dependent 15-hydro 25.7 88 0.003 26.9 5.2 32 16-50 8-39 (267)
269 2e6c_A 5'-nucleotidase SURE; S 25.6 1E+02 0.0034 26.6 5.3 52 15-69 1-57 (244)
270 1rpn_A GDP-mannose 4,6-dehydra 25.6 62 0.0021 28.9 4.4 39 9-51 9-47 (335)
271 3g0o_A 3-hydroxyisobutyrate de 25.6 38 0.0013 30.2 2.8 33 13-50 6-38 (303)
272 2pju_A Propionate catabolism o 25.4 66 0.0023 27.4 4.1 35 325-362 64-98 (225)
273 3gl9_A Response regulator; bet 25.4 1.2E+02 0.004 22.0 5.3 47 345-393 75-121 (122)
274 3md9_A Hemin-binding periplasm 25.3 70 0.0024 27.4 4.5 36 105-147 52-89 (255)
275 2gas_A Isoflavone reductase; N 25.3 58 0.002 28.6 4.0 32 15-50 3-34 (307)
276 3hv2_A Response regulator/HD d 25.2 1.5E+02 0.005 22.5 6.1 46 1-50 1-46 (153)
277 4fbl_A LIPS lipolytic enzyme; 25.1 47 0.0016 28.8 3.4 33 18-50 54-86 (281)
278 3goc_A Endonuclease V; alpha-b 25.1 69 0.0024 27.5 4.1 32 118-149 106-144 (237)
279 1xgk_A Nitrogen metabolite rep 25.1 64 0.0022 29.4 4.4 34 13-50 4-37 (352)
280 4g6h_A Rotenone-insensitive NA 25.1 39 0.0013 32.8 2.9 34 13-51 41-74 (502)
281 1pno_A NAD(P) transhydrogenase 25.1 77 0.0026 25.5 4.0 38 14-51 23-63 (180)
282 2nm0_A Probable 3-oxacyl-(acyl 25.0 78 0.0027 27.2 4.7 33 15-50 21-53 (253)
283 3gg2_A Sugar dehydrogenase, UD 25.0 49 0.0017 31.6 3.6 32 15-51 3-34 (450)
284 4dim_A Phosphoribosylglycinami 24.9 65 0.0022 29.9 4.4 34 12-50 5-38 (403)
285 1f0y_A HCDH, L-3-hydroxyacyl-C 24.8 46 0.0016 29.6 3.2 32 14-50 15-46 (302)
286 2etv_A Iron(III) ABC transport 24.6 56 0.0019 29.7 3.8 37 105-148 89-126 (346)
287 1d4o_A NADP(H) transhydrogenas 24.5 80 0.0027 25.5 4.0 38 14-51 22-62 (184)
288 1u0t_A Inorganic polyphosphate 24.5 69 0.0024 28.7 4.3 36 15-50 5-41 (307)
289 3rp8_A Flavoprotein monooxygen 24.5 50 0.0017 30.6 3.6 40 6-50 15-54 (407)
290 3i4f_A 3-oxoacyl-[acyl-carrier 24.4 76 0.0026 27.2 4.5 34 14-50 6-39 (264)
291 3h1g_A Chemotaxis protein CHEY 24.2 1.5E+02 0.005 21.6 5.7 47 346-394 81-127 (129)
292 1sny_A Sniffer CG10964-PA; alp 24.0 73 0.0025 27.3 4.4 35 14-51 20-57 (267)
293 2h78_A Hibadh, 3-hydroxyisobut 24.0 61 0.0021 28.7 3.9 32 14-50 3-34 (302)
294 1oc2_A DTDP-glucose 4,6-dehydr 23.9 52 0.0018 29.6 3.4 32 15-50 5-38 (348)
295 3n7t_A Macrophage binding prot 23.8 1.4E+02 0.0047 25.8 5.9 37 15-51 10-57 (247)
296 1zmt_A Haloalcohol dehalogenas 23.7 70 0.0024 27.4 4.1 33 15-50 1-33 (254)
297 1psw_A ADP-heptose LPS heptosy 23.7 39 0.0013 30.6 2.5 31 319-352 256-286 (348)
298 1vl0_A DTDP-4-dehydrorhamnose 23.7 52 0.0018 28.7 3.4 34 13-50 11-44 (292)
299 3afo_A NADH kinase POS5; alpha 23.7 43 0.0015 31.3 2.8 36 317-354 107-147 (388)
300 2pk3_A GDP-6-deoxy-D-LYXO-4-he 23.6 65 0.0022 28.5 4.0 35 14-51 11-45 (321)
301 2q8p_A Iron-regulated surface 23.6 74 0.0025 27.3 4.3 37 105-148 53-90 (260)
302 2q1w_A Putative nucleotide sug 23.4 76 0.0026 28.4 4.5 34 13-50 20-53 (333)
303 2rcy_A Pyrroline carboxylate r 23.4 37 0.0013 29.4 2.2 34 12-50 2-39 (262)
304 2nwq_A Probable short-chain de 23.3 76 0.0026 27.7 4.3 32 16-50 22-53 (272)
305 3gk3_A Acetoacetyl-COA reducta 23.2 82 0.0028 27.2 4.5 35 13-50 23-57 (269)
306 3m3p_A Glutamine amido transfe 23.1 2E+02 0.0067 24.8 6.8 55 12-69 1-55 (250)
307 3qua_A Putative uncharacterize 23.1 1.2E+02 0.0041 25.2 5.2 37 13-50 21-61 (199)
308 3iqw_A Tail-anchored protein t 23.0 89 0.003 28.4 4.8 39 14-52 15-54 (334)
309 2fsv_C NAD(P) transhydrogenase 23.0 86 0.0029 25.8 4.0 38 14-51 46-86 (203)
310 1wcv_1 SOJ, segregation protei 23.0 72 0.0025 27.4 4.1 39 14-52 5-45 (257)
311 3i42_A Response regulator rece 22.9 1.1E+02 0.0039 22.1 4.8 35 12-50 1-35 (127)
312 4h3k_B RNA polymerase II subun 22.9 3.3E+02 0.011 22.7 10.4 39 11-52 22-60 (214)
313 1n7h_A GDP-D-mannose-4,6-dehyd 22.9 66 0.0023 29.4 4.0 33 16-51 29-61 (381)
314 2dkn_A 3-alpha-hydroxysteroid 22.7 97 0.0033 26.1 4.9 33 15-50 1-33 (255)
315 3auf_A Glycinamide ribonucleot 22.6 92 0.0032 26.5 4.5 112 269-407 93-206 (229)
316 1jay_A Coenzyme F420H2:NADP+ o 22.6 66 0.0022 26.6 3.6 32 15-50 1-32 (212)
317 4e12_A Diketoreductase; oxidor 22.6 68 0.0023 28.2 3.9 33 13-50 3-35 (283)
318 3hdg_A Uncharacterized protein 22.5 1.6E+02 0.0055 21.6 5.7 48 345-394 78-125 (137)
319 2r6j_A Eugenol synthase 1; phe 22.4 73 0.0025 28.3 4.1 32 16-51 13-44 (318)
320 1xq6_A Unknown protein; struct 22.4 1.1E+02 0.0037 25.7 5.1 35 12-50 2-38 (253)
321 3slg_A PBGP3 protein; structur 22.4 65 0.0022 29.4 3.8 37 11-51 21-58 (372)
322 1djl_A Transhydrogenase DIII; 22.4 90 0.0031 25.8 4.0 38 14-51 45-85 (207)
323 3nbm_A PTS system, lactose-spe 22.4 79 0.0027 23.3 3.5 38 13-50 5-42 (108)
324 3obb_A Probable 3-hydroxyisobu 22.3 91 0.0031 27.8 4.6 31 15-50 4-34 (300)
325 3ppi_A 3-hydroxyacyl-COA dehyd 22.3 1E+02 0.0036 26.7 5.1 33 15-50 30-62 (281)
326 1y1p_A ARII, aldehyde reductas 22.3 1.1E+02 0.0037 27.2 5.3 35 12-50 9-43 (342)
327 3se7_A VANA; alpha-beta struct 22.3 52 0.0018 29.9 3.1 39 13-51 2-44 (346)
328 2x5n_A SPRPN10, 26S proteasome 22.2 1.3E+02 0.0044 24.7 5.3 37 15-51 107-144 (192)
329 3ego_A Probable 2-dehydropanto 22.1 47 0.0016 29.7 2.7 32 14-51 2-33 (307)
330 1xjc_A MOBB protein homolog; s 22.0 1.2E+02 0.004 24.5 4.8 39 14-52 3-42 (169)
331 1u7z_A Coenzyme A biosynthesis 22.0 65 0.0022 27.5 3.4 21 31-51 37-57 (226)
332 1txg_A Glycerol-3-phosphate de 22.0 49 0.0017 29.8 2.8 31 15-50 1-31 (335)
333 3l18_A Intracellular protease 22.0 1.8E+02 0.0063 22.7 6.1 37 14-51 2-38 (168)
334 1yb4_A Tartronic semialdehyde 21.9 63 0.0022 28.4 3.5 31 14-49 3-33 (295)
335 3pfb_A Cinnamoyl esterase; alp 21.9 1.3E+02 0.0043 25.2 5.5 36 15-50 46-83 (270)
336 2zki_A 199AA long hypothetical 21.8 86 0.0029 25.5 4.2 36 14-50 4-40 (199)
337 1l5x_A SurviVal protein E; str 21.8 1.2E+02 0.0042 26.7 5.2 37 15-54 1-38 (280)
338 3f9i_A 3-oxoacyl-[acyl-carrier 21.8 1.3E+02 0.0043 25.5 5.4 35 13-50 12-46 (249)
339 3kkj_A Amine oxidase, flavin-c 21.8 48 0.0017 27.9 2.7 19 32-50 15-33 (336)
340 3c85_A Putative glutathione-re 21.8 60 0.002 26.1 3.1 35 12-51 37-72 (183)
341 2fx5_A Lipase; alpha-beta hydr 21.7 65 0.0022 27.4 3.5 37 14-50 48-84 (258)
342 2wtm_A EST1E; hydrolase; 1.60A 21.7 1.2E+02 0.004 25.4 5.2 36 15-50 27-64 (251)
343 2ehd_A Oxidoreductase, oxidore 21.7 70 0.0024 26.8 3.7 32 16-50 6-37 (234)
344 3d3j_A Enhancer of mRNA-decapp 21.7 72 0.0025 28.6 3.8 34 15-51 133-168 (306)
345 2v4n_A Multifunctional protein 21.7 1.4E+02 0.0046 26.0 5.4 38 15-54 2-39 (254)
346 4egf_A L-xylulose reductase; s 21.7 98 0.0034 26.7 4.7 33 15-50 20-52 (266)
347 4em8_A Ribose 5-phosphate isom 21.5 1.4E+02 0.0048 23.4 4.9 38 11-50 4-41 (148)
348 3tfo_A Putative 3-oxoacyl-(acy 21.5 1.1E+02 0.0036 26.6 4.8 33 15-50 4-36 (264)
349 3dkr_A Esterase D; alpha beta 21.4 86 0.0029 25.8 4.2 36 15-50 22-57 (251)
350 2g36_A Tryptophanyl-tRNA synth 21.4 69 0.0024 29.3 3.7 37 15-51 15-53 (340)
351 3nrc_A Enoyl-[acyl-carrier-pro 21.3 78 0.0027 27.6 4.0 34 16-51 27-61 (280)
352 1wma_A Carbonyl reductase [NAD 21.2 1.1E+02 0.0038 26.1 5.0 34 14-50 3-37 (276)
353 3ea0_A ATPase, para family; al 21.1 76 0.0026 26.8 3.8 41 13-53 2-45 (245)
354 1xrs_B D-lysine 5,6-aminomutas 21.1 50 0.0017 28.9 2.5 39 13-51 119-166 (262)
355 3psh_A Protein HI_1472; substr 21.1 92 0.0032 27.8 4.5 37 105-148 77-114 (326)
356 3d3k_A Enhancer of mRNA-decapp 21.0 78 0.0027 27.6 3.8 34 15-51 86-121 (259)
357 3ug7_A Arsenical pump-driving 21.0 1.2E+02 0.004 27.7 5.2 38 15-52 26-64 (349)
358 2q5c_A NTRC family transcripti 21.0 54 0.0019 27.2 2.7 36 324-362 51-86 (196)
359 3oid_A Enoyl-[acyl-carrier-pro 21.0 1E+02 0.0036 26.4 4.7 36 12-50 1-36 (258)
360 1udb_A Epimerase, UDP-galactos 20.9 94 0.0032 27.7 4.6 32 15-50 1-32 (338)
361 3ic5_A Putative saccharopine d 20.9 81 0.0028 22.7 3.5 33 14-51 5-38 (118)
362 3zq6_A Putative arsenical pump 20.9 1.1E+02 0.0036 27.6 4.9 38 15-52 14-52 (324)
363 1u9c_A APC35852; structural ge 20.7 1.7E+02 0.0057 24.4 5.9 37 15-51 6-51 (224)
364 2r7a_A Bacterial heme binding 20.7 98 0.0033 26.4 4.5 36 105-147 52-89 (256)
365 3o1l_A Formyltetrahydrofolate 20.7 1.4E+02 0.0047 26.7 5.4 115 266-407 170-286 (302)
366 4f0j_A Probable hydrolytic enz 20.7 1.1E+02 0.0037 26.2 4.9 35 16-50 47-81 (315)
367 1kjq_A GART 2, phosphoribosylg 20.6 1.7E+02 0.0059 26.7 6.5 34 13-51 10-43 (391)
368 1jzt_A Hypothetical 27.5 kDa p 20.6 66 0.0023 27.8 3.2 33 15-50 59-93 (246)
369 1qo0_D AMIR; binding protein, 20.6 2.4E+02 0.0082 22.4 6.8 48 345-394 78-125 (196)
370 3gem_A Short chain dehydrogena 20.5 81 0.0028 27.2 3.9 32 16-50 28-59 (260)
371 3qsg_A NAD-binding phosphogluc 20.5 53 0.0018 29.4 2.7 33 13-50 23-56 (312)
372 1jfr_A Lipase; serine hydrolas 20.5 72 0.0025 27.1 3.5 37 14-50 53-89 (262)
373 1eiw_A Hypothetical protein MT 20.4 1.8E+02 0.0063 21.5 5.2 67 320-393 34-109 (111)
374 1rcu_A Conserved hypothetical 20.4 1.4E+02 0.0047 24.7 5.0 36 12-47 21-63 (195)
375 3osu_A 3-oxoacyl-[acyl-carrier 20.3 1.3E+02 0.0045 25.4 5.2 34 14-50 3-36 (246)
376 1mv8_A GMD, GDP-mannose 6-dehy 20.3 94 0.0032 29.4 4.5 31 15-50 1-31 (436)
377 3g79_A NDP-N-acetyl-D-galactos 20.2 1.1E+02 0.0037 29.5 4.9 36 13-53 17-54 (478)
378 3ga2_A Endonuclease V; alpha-b 20.2 85 0.0029 27.1 3.7 31 118-148 108-145 (246)
379 3o26_A Salutaridine reductase; 20.2 1.1E+02 0.0037 26.8 4.8 36 13-51 10-45 (311)
380 1o5i_A 3-oxoacyl-(acyl carrier 20.0 1.3E+02 0.0045 25.5 5.1 34 14-50 18-51 (249)
381 2d1p_B TUSC, hypothetical UPF0 20.0 1.2E+02 0.0043 22.4 4.4 33 19-51 7-41 (119)
382 3t6k_A Response regulator rece 20.0 1.6E+02 0.0056 21.7 5.2 47 346-394 78-124 (136)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=6.5e-67 Score=511.55 Aligned_cols=409 Identities=26% Similarity=0.459 Sum_probs=328.5
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCCCCCCCC-----CCCCCceEEEccCCCCCCCCCCCCCCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEG--FSITIIHTTLNSPNS-----CNYPHFEFCSFSDDGFSETYQPSKVAD 84 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (435)
.+++||+++|+|++||++|++.||+.|++|| +.|||++++.+.... ...++++|..+| ++++++.++ ..
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip-dglp~~~~~---~~ 86 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH-DGLPKGYVS---SG 86 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC-CCCCTTCCC---CS
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC-CCCCCCccc---cC
Confidence 3578999999999999999999999999999 999999996332111 113579999999 889887332 22
Q ss_pred CHHHHHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhhhhh
Q 013836 85 DIPALLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFPILR 164 (435)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 164 (435)
+....+..+.+.+...+++.++++.++.+ .++||||+|.++.|+..+|+++|||++.+++++++..+.+++.+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 162 (454)
T 3hbf_A 87 NPREPIFLFIKAMQENFKHVIDEAVAETG----KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIR 162 (454)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHH
Confidence 33344555555566667777777654322 57999999999999999999999999999999999988877655433
Q ss_pred hc-CCCCCCCCCCcccccCCCCCCcCCCCcccc-CCCchHHHHHHHHhhhcccccEEEecchhhhchHHHHHhhhhccCC
Q 013836 165 EK-GYLPIQDFQLEAPVIEFPPLRVKDIPLLKT-QDSNNADKVLSLRDSQIMASSGIIWNSFEDLEQVELTAVHQQYYLS 242 (435)
Q Consensus 165 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~ 242 (435)
.. ......+......+|+++.++.++++.... +....+...+.+..+....++.+++||+++||+++++.+++. +
T Consensus 163 ~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~--~- 239 (454)
T 3hbf_A 163 EKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK--F- 239 (454)
T ss_dssp HTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT--S-
T ss_pred hhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc--C-
Confidence 22 110111111223478888889999886543 344456777777788888999999999999999999999987 2
Q ss_pred CCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccccC-------------------------ccccCC
Q 013836 243 IPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLARG-------------------------AEWLEP 297 (435)
Q Consensus 243 ~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~-------------------------~~~~~~ 297 (435)
+++++|||++..... ...+.+.++.+||+.+++++|||||||++.. .+..+.
T Consensus 240 ~~v~~vGPl~~~~~~---~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~ 316 (454)
T 3hbf_A 240 KLLLNVGPFNLTTPQ---RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEK 316 (454)
T ss_dssp SCEEECCCHHHHSCC---SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHH
T ss_pred CCEEEECCccccccc---ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhc
Confidence 359999999875432 2233345699999998889999999993211 111223
Q ss_pred CchhhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC
Q 013836 298 LPKGILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG 377 (435)
Q Consensus 298 l~~~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 377 (435)
+|+++.++.++|+++++|+||.++|+|+++++|||||||||++||+++|||||++|++.||+.||+++++.+|+|+.++.
T Consensus 317 lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~ 396 (454)
T 3hbf_A 317 LPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN 396 (454)
T ss_dssp SCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG
T ss_pred CCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC
Confidence 67788788889999999999999999999999999999999999999999999999999999999999984599999987
Q ss_pred -cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 378 -KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 378 -~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
.+++++|.++|+++|+|+++++||++|+++++++++|+++||++++.+++|++.|.+
T Consensus 397 ~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 397 GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 899999999999999984456999999999999999999999999999999998863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.9e-62 Score=485.71 Aligned_cols=416 Identities=28% Similarity=0.583 Sum_probs=315.7
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC---------CCCceEEEccCCCCCCCCCCCCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCN---------YPHFEFCSFSDDGFSETYQPSKV 82 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 82 (435)
|+++||+++|+|++||++|++.||++|++|||+|||++++.+...... .++++|+.++ +++++...+...
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-~~lp~~~~~~~~ 84 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-DGLTPMEGDGDV 84 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-CCCC--------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-CCCCCcccccCc
Confidence 567899999999999999999999999999999999999743211111 1489999999 777652000112
Q ss_pred CCCHHHHHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhhh
Q 013836 83 ADDIPALLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFPI 162 (435)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 162 (435)
..+...++..+...+...++++++.+..+.+. .+|||||+|.++.|+..+|+++|||++.++++++.....+.+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~---~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 161 (482)
T 2pq6_A 85 SQDVPTLCQSVRKNFLKPYCELLTRLNHSTNV---PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRS 161 (482)
T ss_dssp -CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSS---CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHhhhccC---CCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHH
Confidence 23455555555567777888888877632000 579999999999999999999999999999999988777665666
Q ss_pred hhhcCCCCCCCC---------CCcccccCCCCCCcCCCCccccC--CCchHHHHHHHHhhhcccccEEEecchhhhchHH
Q 013836 163 LREKGYLPIQDF---------QLEAPVIEFPPLRVKDIPLLKTQ--DSNNADKVLSLRDSQIMASSGIIWNSFEDLEQVE 231 (435)
Q Consensus 163 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~ 231 (435)
+...++.|.... ...+.+++++.++.++++..... ........+....+...+++.+++||+++||+++
T Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 162 FVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 656666665431 11223456655666666533321 1234455555666777889999999999999999
Q ss_pred HHHhhhhccCCCCeeeeCCCccC--CCC------C-CCCCCcccchhhhhhhcCCCCcEEEEEeccccC-----------
Q 013836 232 LTAVHQQYYLSIPVFPIGPFHKC--FPA------S-SSSLLSQDQSSISWLDKQAPRSVIYVSFGLARG----------- 291 (435)
Q Consensus 232 ~~~~~~~~~~~~pv~~vGp~~~~--~~~------~-~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~----------- 291 (435)
++.+++. + +++++|||++.. ... . ....++.+.++.+||++++++++||||||++..
T Consensus 242 ~~~~~~~--~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 318 (482)
T 2pq6_A 242 INALSST--I-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAW 318 (482)
T ss_dssp HHHHHTT--C-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHH
T ss_pred HHHHHHh--C-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHH
Confidence 9999997 4 459999999863 210 0 012234555689999998888999999993211
Q ss_pred --------------ccc----cCCCchhhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeecc
Q 013836 292 --------------AEW----LEPLPKGILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQP 353 (435)
Q Consensus 292 --------------~~~----~~~l~~~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P 353 (435)
.+. ...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|
T Consensus 319 ~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P 398 (482)
T 2pq6_A 319 GLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWP 398 (482)
T ss_dssp HHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecC
Confidence 000 01267777777889999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHH-hhhccEEEeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 013836 354 YFGDQMVNSRYVS-HAWRVGLQLEGKLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHI 432 (435)
Q Consensus 354 ~~~DQ~~na~~v~-~~~G~g~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 432 (435)
++.||+.||++++ + +|+|+.++..+++++|.++|+++|+|+++.+||++|+++++++++|+++||+++++++.|++.+
T Consensus 399 ~~~dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 477 (482)
T 2pq6_A 399 FFADQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 477 (482)
T ss_dssp CSTTHHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 9999999999997 6 7999999867999999999999999833337999999999999999999999999999999988
Q ss_pred HcC
Q 013836 433 MSL 435 (435)
Q Consensus 433 ~~~ 435 (435)
.++
T Consensus 478 ~~~ 480 (482)
T 2pq6_A 478 LLK 480 (482)
T ss_dssp TCC
T ss_pred Hhc
Confidence 653
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.3e-58 Score=458.40 Aligned_cols=409 Identities=24% Similarity=0.386 Sum_probs=298.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCCC-CCC-C----C-CCCceEEEccCCCCCCCCCCCCCCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSE-GFSITIIHTTLNS-PNS-C----N-YPHFEFCSFSDDGFSETYQPSKVAD 84 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~r-GH~Vt~~~~~~~~-~~~-~----~-~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (435)
+++||+++|+|++||++|+++||++|++| ||+|||++++.+. ... . . ..+++|+.++ +..... .....
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~-~~~~~~---~~~~~ 80 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLP-PVDLTD---LSSST 80 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECC-CCCCTT---SCTTC
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcC-CCCCCC---CCCch
Confidence 46899999999999999999999999998 9999999996531 211 1 0 2589999999 432111 11122
Q ss_pred CHHHHHHHHHHhcchHHHHHHHHHHhccCCcCCCCc-cEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhhhh
Q 013836 85 DIPALLLSLNAKCIVPFRDCLANKLMSNAQESKDSF-ACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFPIL 163 (435)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (435)
+....+......+...++++++.+... .++ ||||+|.+..|+..+|+++|||++.++++++...+.+.+++..
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~------~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEG------GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL 154 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHT------TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccC------CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHH
Confidence 343333334455556677777666421 468 9999999988999999999999999999998877666554433
Q ss_pred hhcCCCCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHhhhcccccEEEecchhhhchHHHHHhhhhccCCC
Q 013836 164 REKGYLPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRDSQIMASSGIIWNSFEDLEQVELTAVHQQYYLSI 243 (435)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~ 243 (435)
......+..+......+|+++++...+++.....+.......+......++.++++++|++.++|++.+..+++.....+
T Consensus 155 ~~~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~ 234 (480)
T 2vch_A 155 DETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKP 234 (480)
T ss_dssp HHHCCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCC
T ss_pred HhcCCCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCC
Confidence 22222121111111234566656555555433222223444445555667788899999999999987776653100013
Q ss_pred CeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccc--------------------------cCcc----
Q 013836 244 PVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLA--------------------------RGAE---- 293 (435)
Q Consensus 244 pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v--------------------------~~~~---- 293 (435)
++++|||++...... ...+.+.++.+||++++++++||||||++ ....
T Consensus 235 ~v~~vGpl~~~~~~~--~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~ 312 (480)
T 2vch_A 235 PVYPVGPLVNIGKQE--AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIAN 312 (480)
T ss_dssp CEEECCCCCCCSCSC--C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTT
T ss_pred cEEEEeccccccccc--cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccc
Confidence 599999998654210 00223456999999988889999999921 1110
Q ss_pred ----------cc-CCCchhhHhhhcCCceEEe-ecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHH
Q 013836 294 ----------WL-EPLPKGILEMVDGRGYIVK-WAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVN 361 (435)
Q Consensus 294 ----------~~-~~l~~~~~~~~~~~~~~~~-~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~n 361 (435)
.. ..+|+++.+++.++.+++. |+||.+||+|++|++||||||+||++||+++|||||++|++.||+.|
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~n 392 (480)
T 2vch_A 313 SSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMN 392 (480)
T ss_dssp TTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred ccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHH
Confidence 01 2366777777777767775 99999999999999999999999999999999999999999999999
Q ss_pred HHHH-HhhhccEEEeCC----cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 362 SRYV-SHAWRVGLQLEG----KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 362 a~~v-~~~~G~g~~~~~----~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
|+++ ++ +|+|+.++. .+++++|+++|+++|+++++++||++|+++++++++|+++||++..++++|++.+++
T Consensus 393 a~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 393 AVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 9997 67 799999975 489999999999999844348999999999999999999999999999999998763
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4.4e-59 Score=460.62 Aligned_cols=408 Identities=26% Similarity=0.443 Sum_probs=302.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCe--EEEEeCCCCC----CC-CC-CCCCceEEEccCCCCCCCCCCCCCCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFS--ITIIHTTLNS----PN-SC-NYPHFEFCSFSDDGFSETYQPSKVAD 84 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~--Vt~~~~~~~~----~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (435)
+++||+++|+|++||++|+++||++|++|||+ ||+++++.+. .. .. ...+++|+.++ +++++..+. ..
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~-~glp~~~~~---~~ 81 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS-DGVPEGYVF---AG 81 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECC-CCCCTTCCC---CC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC-CCCCCcccc---cC
Confidence 46899999999999999999999999999755 5778875211 10 11 12589999999 778766321 12
Q ss_pred CHHHHHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhhhhh
Q 013836 85 DIPALLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFPILR 164 (435)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 164 (435)
+....+..+...+...++++++++.++.+ .+|||||+|.++.|+..+|+++|||+|.++++++.....+.+.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (456)
T 2c1x_A 82 RPQEDIELFTRAAPESFRQGMVMAVAETG----RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIR 157 (456)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHT----CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ChHHHHHHHHHHhHHHHHHHHHHHHhccC----CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHH
Confidence 33334444444444556666666553222 58999999999899999999999999999999887766544333211
Q ss_pred hc-CCCCC-C-CCCCcccccCCCCCCcCCCCcccc--CCCchHHHHHHHHhhhcccccEEEecchhhhchHHHHHhhhhc
Q 013836 165 EK-GYLPI-Q-DFQLEAPVIEFPPLRVKDIPLLKT--QDSNNADKVLSLRDSQIMASSGIIWNSFEDLEQVELTAVHQQY 239 (435)
Q Consensus 165 ~~-~~~~~-~-~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~ 239 (435)
.. +..+. . .......+|+++.++.++++.... .....+...+.+..+...+++.+++||+++||+++++.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~- 236 (456)
T 2c1x_A 158 EKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK- 236 (456)
T ss_dssp HHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH-
T ss_pred hccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc-
Confidence 11 11111 0 011122356666666666664221 112234445555555667889999999999999999999987
Q ss_pred cCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEecccc-------------------------Cccc
Q 013836 240 YLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLAR-------------------------GAEW 294 (435)
Q Consensus 240 ~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~-------------------------~~~~ 294 (435)
+ +++++|||++..... ..++.+.++.+||+.++++++||||||++. +...
T Consensus 237 -~-~~~~~vGpl~~~~~~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~ 311 (456)
T 2c1x_A 237 -L-KTYLNIGPFNLITPP---PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA 311 (456)
T ss_dssp -S-SCEEECCCHHHHC------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG
T ss_pred -C-CCEEEecCcccCccc---ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 3 349999999875432 123444568999999888999999999321 1111
Q ss_pred cCCCchhhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEE
Q 013836 295 LEPLPKGILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQ 374 (435)
Q Consensus 295 ~~~l~~~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~ 374 (435)
...+|+++.+++++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.+|+|+.
T Consensus 312 ~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~ 391 (456)
T 2c1x_A 312 RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVR 391 (456)
T ss_dssp GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEE
T ss_pred hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEE
Confidence 22366677677788999999999999999999999999999999999999999999999999999999999993499999
Q ss_pred eCC-cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 375 LEG-KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 375 ~~~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
++. .+++++|.++|+++|+|+++++||++|+++++.+++|+++||++.+.+++|++.+.+
T Consensus 392 l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 392 IEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp CGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred ecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 987 799999999999999984344899999999999999999999999999999998854
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=5.1e-56 Score=439.90 Aligned_cols=401 Identities=24% Similarity=0.424 Sum_probs=299.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---------CCCCCCceEEEccCCC-CCCCCCCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPN---------SCNYPHFEFCSFSDDG-FSETYQPS 80 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (435)
+++||+++|+|++||++|+++||++|++| ||+|||++++.+... .....+++|..++ ++ ++..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp-~~~~~~~---- 82 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLP-EVEPPPQ---- 82 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECC-CCCCCCG----
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECC-CCCCCcc----
Confidence 46899999999999999999999999999 999999999765321 0112589999999 54 3321
Q ss_pred CCCCCHHHHHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHHhhh
Q 013836 81 KVADDIPALLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSYAAF 160 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 160 (435)
....+....+......+...++++++.+ . . .+|||||+|.++.|+..+|+++|||++.++++++.....+.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~--~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 155 (463)
T 2acv_A 83 ELLKSPEFYILTFLESLIPHVKATIKTI-L--S----NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSL 155 (463)
T ss_dssp GGGGSHHHHHHHHHHHTHHHHHHHHHHH-C--C----TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHG
T ss_pred cccCCccHHHHHHHHhhhHHHHHHHHhc-c--C----CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHH
Confidence 1111111113233345555667777665 1 1 5799999999999999999999999999999998887766554
Q ss_pred hhhhhcCCCCCCCCCC---cccccCC-CCCCcCCCCccccCCCchHHHHHHHHhhhcccccEEEecchhhhchHHHHHhh
Q 013836 161 PILREKGYLPIQDFQL---EAPVIEF-PPLRVKDIPLLKTQDSNNADKVLSLRDSQIMASSGIIWNSFEDLEQVELTAVH 236 (435)
Q Consensus 161 ~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~ 236 (435)
+..... .+..+... ...+|++ +.+..++++.....+ ......+.+.....+.++.+++||+.++|++..+.++
T Consensus 156 ~~~~~~--~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~ 232 (463)
T 2acv_A 156 KNRQIE--EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALY 232 (463)
T ss_dssp GGSCTT--CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHH
T ss_pred Hhhccc--CCCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHH
Confidence 432211 11111111 2235666 555555555322222 2344444555566778889999999999999887777
Q ss_pred hhccC--CCCeeeeCCCccCCC-CCCCCCCcccchhhhhhhcCCCCcEEEEEecccc-Ccc-------------------
Q 013836 237 QQYYL--SIPVFPIGPFHKCFP-ASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLAR-GAE------------------- 293 (435)
Q Consensus 237 ~~~~~--~~pv~~vGp~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~-~~~------------------- 293 (435)
+. . .+++++|||++.... ......++.+.++.+||+.++++++||||||++. ...
T Consensus 233 ~~--~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 233 DH--DEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp HH--CTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred hc--cccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 64 2 245999999986542 1000001334568999999888999999999543 210
Q ss_pred c-c----CCCchhhHhhh--cCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHH-
Q 013836 294 W-L----EPLPKGILEMV--DGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYV- 365 (435)
Q Consensus 294 ~-~----~~l~~~~~~~~--~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v- 365 (435)
+ . +.+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++
T Consensus 311 ~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv 390 (463)
T 2acv_A 311 WSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV 390 (463)
T ss_dssp EECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH
T ss_pred EEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHH
Confidence 0 0 13667776666 78999999999999999999999999999999999999999999999999999999995
Q ss_pred HhhhccEEEe-C----C--cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 366 SHAWRVGLQL-E----G--KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 366 ~~~~G~g~~~-~----~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
++ +|+|+.+ . . .+++++|.++|+++|++. ++||++|+++++++++|+++||+++.++++|++.+.
T Consensus 391 ~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 391 KE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 78 7999999 2 2 489999999999999731 699999999999999999999999999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.6e-43 Score=343.47 Aligned_cols=380 Identities=16% Similarity=0.186 Sum_probs=247.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCCCCCCC-CCCCHHHH
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSETYQPSK-VADDIPAL 89 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (435)
+|.+|||+|+++++.||++|+++||++|++|||+|++++++...... ...|++|+.++ .+++....... ...+....
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~-~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 86 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQV-KAAGATPVVYD-SILPKESNPEESWPEDQESA 86 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HHHTCEEEECC-CCSCCTTCTTCCCCSSHHHH
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHH-HhCCCEEEecC-ccccccccchhhcchhHHHH
Confidence 57789999999999999999999999999999999999995432221 22588999998 65554311101 12233333
Q ss_pred HHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhhhhhhcCCC
Q 013836 90 LLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFPILREKGYL 169 (435)
Q Consensus 90 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
+..+........+++.+.+.+ .+||+||+|.+..|+..+|+++|||++.+++.+..........+. ....+.
T Consensus 87 ~~~~~~~~~~~~~~l~~~l~~-------~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (424)
T 2iya_A 87 MGLFLDEAVRVLPQLEDAYAD-------DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPA-VQDPTA 158 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-------SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGG-GSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-------cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccc-cccccc
Confidence 333333333333333333332 689999999988899999999999999998776421111000000 000000
Q ss_pred CCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHh----------hhcccccEEEecchhhhchHHHHHhhhhc
Q 013836 170 PIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRD----------SQIMASSGIIWNSFEDLEQVELTAVHQQY 239 (435)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~ns~~~le~~~~~~~~~~~ 239 (435)
..... ...+...... ..+.... .........+.... .....++.+++++.+.++++ ...
T Consensus 159 ~~~~~---~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~- 227 (424)
T 2iya_A 159 DRGEE---AAAPAGTGDA-EEGAEAE-DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDT- 227 (424)
T ss_dssp -------------------------H-HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GGG-
T ss_pred ccccc---cccccccccc-hhhhccc-hhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----ccC-
Confidence 00000 0000000000 0000000 00000001111111 11125678899999988865 333
Q ss_pred cCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccccCc---------cccCCCchhh--------
Q 013836 240 YLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLARGA---------EWLEPLPKGI-------- 302 (435)
Q Consensus 240 ~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~~---------~~~~~l~~~~-------- 302 (435)
++.++++|||+..... . ..+|++.++++++|||+||..... +++...+..+
T Consensus 228 -~~~~~~~vGp~~~~~~---------~--~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~ 295 (424)
T 2iya_A 228 -VGDNYTFVGPTYGDRS---------H--QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFV 295 (424)
T ss_dssp -CCTTEEECCCCCCCCG---------G--GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTS
T ss_pred -CCCCEEEeCCCCCCcc---------c--CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcC
Confidence 4455999999754211 0 235776656778999999943211 0111111111
Q ss_pred ----HhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC-
Q 013836 303 ----LEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG- 377 (435)
Q Consensus 303 ----~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~- 377 (435)
....++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ .|+|+.+..
T Consensus 296 ~~~~~~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~ 372 (424)
T 2iya_A 296 DPADLGEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGRHIPRD 372 (424)
T ss_dssp CGGGGCSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCGG
T ss_pred ChHHhccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCCEEEcCcC
Confidence 1124678999999999999999998 99999999999999999999999999999999999999 699999987
Q ss_pred cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 378 KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 378 ~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
.+++++|.++|+++|+| +++++++++++++++ ..++..++++.+++.+.
T Consensus 373 ~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 373 QVTAEKLREAVLAVASD---PGVAERLAAVRQEIR----EAGGARAAADILEGILA 421 (424)
T ss_dssp GCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHHh
Confidence 78999999999999999 899999999999998 56788888888887664
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.9e-42 Score=337.96 Aligned_cols=342 Identities=15% Similarity=0.127 Sum_probs=211.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCC-------CCCCC----
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSET-------YQPSK---- 81 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---- 81 (435)
+.|||+|+++|+.||++|+++||++|++|||+|||++++.. .... ..++.+..+. .+.... .....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~-~~~~-~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 97 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDI-RAVA-EAGLCAVDVS-PGVNYAKLFVPDDTDVTDPMHS 97 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSST-HHHH-TTTCEEEESS-TTCCSHHHHSCCC---------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcch-hhHH-hcCCeeEecC-CchhHhhhccccccccccccch
Confidence 36999999999999999999999999999999999998532 2222 2578888776 332111 00000
Q ss_pred CCCCHHHHHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhh
Q 013836 82 VADDIPALLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFP 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 161 (435)
...........+.......+.++++.+.+ .+||+||+|.+..++..+|+.+|||++.+...+...........
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~ 170 (400)
T 4amg_A 98 EGLGEGFFAEMFARVSAVAVDGALRTARS-------WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGALI 170 (400)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhHH
Confidence 00111111222222233333344444444 57999999999999999999999999987655432211111000
Q ss_pred hhhhcCCCCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHhhh-cccccEEEecchhhhchHHHHHhhhhcc
Q 013836 162 ILREKGYLPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRDSQ-IMASSGIIWNSFEDLEQVELTAVHQQYY 240 (435)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ns~~~le~~~~~~~~~~~~ 240 (435)
. ........+..-. .......+......+... .+..
T Consensus 171 ~-------------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~- 207 (400)
T 4amg_A 171 R-------------------------------------RAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL-----LPED- 207 (400)
T ss_dssp H-------------------------------------HHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT-----SCGG-
T ss_pred H-------------------------------------HHHHHHHHHhCCCcccccchhhcccCchhhcc-----Cccc-
Confidence 0 0000000000000 011111222221111100 1100
Q ss_pred CCCC-eeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccccCcc-ccCCC----------chhh------
Q 013836 241 LSIP-VFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLARGAE-WLEPL----------PKGI------ 302 (435)
Q Consensus 241 ~~~p-v~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~~~-~~~~l----------~~~~------ 302 (435)
...+ .+.+.+.... ....+.+|++..+.+++||||||.+...+ ....+ +..+
T Consensus 208 ~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~ 277 (400)
T 4amg_A 208 RRSPGAWPMRYVPYN----------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGG 277 (400)
T ss_dssp GCCTTCEECCCCCCC----------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCT
T ss_pred ccCCcccCccccccc----------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecC
Confidence 0111 3333322211 11124568888888999999999543211 01111 1111
Q ss_pred -----HhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC
Q 013836 303 -----LEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG 377 (435)
Q Consensus 303 -----~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 377 (435)
...+++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.||+++++ +|+|+.++.
T Consensus 278 ~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G~g~~l~~ 354 (400)
T 4amg_A 278 GDLALLGELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-LGIGFDAEA 354 (400)
T ss_dssp TCCCCCCCCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-HTSEEECCT
T ss_pred ccccccccCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-CCCEEEcCC
Confidence 1124679999999999999999998 99999999999999999999999999999999999999 699999987
Q ss_pred -cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013836 378 -KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDH 431 (435)
Q Consensus 378 -~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 431 (435)
+++++ +|+++|+| ++||++|+++++++++ -.+..++++.+++.
T Consensus 355 ~~~~~~----al~~lL~d---~~~r~~a~~l~~~~~~----~~~~~~~a~~le~l 398 (400)
T 4amg_A 355 GSLGAE----QCRRLLDD---AGLREAALRVRQEMSE----MPPPAETAAXLVAL 398 (400)
T ss_dssp TTCSHH----HHHHHHHC---HHHHHHHHHHHHHHHT----SCCHHHHHHHHHHH
T ss_pred CCchHH----HHHHHHcC---HHHHHHHHHHHHHHHc----CCCHHHHHHHHHHh
Confidence 66654 56788999 9999999999999994 45667777777653
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1e-39 Score=320.13 Aligned_cols=362 Identities=14% Similarity=0.104 Sum_probs=232.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCCCCCCCCCCCHHHHHHHHH
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSETYQPSKVADDIPALLLSLN 94 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
|||+|++.|+.||++|+++||++|++|||+|+|++++... ......|++|+.++ .......+... ......+ .
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~-~~v~~~g~~~~~i~-~~~~~~~~~~~--~~~~~~~---~ 73 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCA-ERLAEVGVPHVPVG-PSARAPIQRAK--PLTAEDV---R 73 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHTTCCEEECC-C-------CCS--CCCHHHH---H
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHH-HHHHHcCCeeeeCC-CCHHHHhhccc--ccchHHH---H
Confidence 7999999999999999999999999999999999995422 11123589999998 44322211111 1111111 1
Q ss_pred HhcchHHHHHHHHHHhccCCcCCCCccEEEEcC-chhh--HHHHHHHcCCCeEEEcccchHHHHHHhhhhhhhhcCCCCC
Q 013836 95 AKCIVPFRDCLANKLMSNAQESKDSFACLITDA-AWFI--ALSVANDFKLPTIVLLTDSIAASLSYAAFPILREKGYLPI 171 (435)
Q Consensus 95 ~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (435)
..+...+.+.++.+.+.. .+||+||+|. +..| +..+|+++|||++.+++.+..... .+.|.
T Consensus 74 ~~~~~~~~~~~~~l~~~~-----~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~~p~ 137 (415)
T 1iir_A 74 RFTTEAIATQFDEIPAAA-----EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PYYPP 137 (415)
T ss_dssp HHHHHHHHHHHHHHHHHT-----TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSCC
T ss_pred HHHHHHHHHHHHHHHHHh-----cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cccCC
Confidence 122222344455554311 6899999997 6788 899999999999998877644211 01111
Q ss_pred CCCCCcccccCCCCCCcCCCCccccCC--CchHHHHHHHHh------------hhcccccEEEecchhhhch-HHHHHhh
Q 013836 172 QDFQLEAPVIEFPPLRVKDIPLLKTQD--SNNADKVLSLRD------------SQIMASSGIIWNSFEDLEQ-VELTAVH 236 (435)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~------------~~~~~~~~~l~ns~~~le~-~~~~~~~ 236 (435)
..... .+++ ....+.+....... .......+.... +..... .+++|+++.|++ + +
T Consensus 138 ~~~~~--~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~ 207 (415)
T 1iir_A 138 PPLGE--PSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----P 207 (415)
T ss_dssp CC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----C
T ss_pred ccCCc--cccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----c
Confidence 00000 0000 00000000000000 000000001110 111122 578899998886 4 4
Q ss_pred hhccCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEecccc-Ccc-------ccCCCchhhH-----
Q 013836 237 QQYYLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLAR-GAE-------WLEPLPKGIL----- 303 (435)
Q Consensus 237 ~~~~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~-~~~-------~~~~l~~~~~----- 303 (435)
+. .++++|||+..... ++.+.++.+|++++ +++||||||.+. ..+ ++..++..+.
T Consensus 208 ~~----~~~~~vG~~~~~~~------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~al~~~~~~~v~~~g~ 275 (415)
T 1iir_A 208 TD----LDAVQTGAWILPDE------RPLSPELAAFLDAG--PPPVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGW 275 (415)
T ss_dssp CS----SCCEECCCCCCCCC------CCCCHHHHHHHHTS--SCCEEEECC---CCHHHHHHHHHHHHHTTCCEEECTTC
T ss_pred cc----CCeEeeCCCccCcc------cCCCHHHHHHHhhC--CCeEEEeCCCCCCcHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 43 26999999986532 22334589999864 469999999642 111 1111111111
Q ss_pred -----hhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC-
Q 013836 304 -----EMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG- 377 (435)
Q Consensus 304 -----~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~- 377 (435)
...++|+.+.+|+||.++|+.+++ ||||||+||+.||+++|||+|++|...||+.||+++++ .|+|+.++.
T Consensus 276 ~~~~~~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~ 352 (415)
T 1iir_A 276 ADLVLPDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDGP 352 (415)
T ss_dssp TTCCCSSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSSS
T ss_pred CcccccCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH-CCCcccCCcC
Confidence 123468889999999999988888 99999999999999999999999999999999999999 699999986
Q ss_pred cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 013836 378 KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHI 432 (435)
Q Consensus 378 ~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 432 (435)
.++.++|.++|+++ +| ++|++++++++++++ ..++..++++.+++.+
T Consensus 353 ~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 353 IPTFDSLSAALATA-LT---PETHARATAVAGTIR----TDGAAVAARLLLDAVS 399 (415)
T ss_dssp SCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC----SCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh----hcChHHHHHHHHHHHH
Confidence 78999999999999 88 899999999999987 4556666666666554
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=3.2e-38 Score=309.58 Aligned_cols=367 Identities=14% Similarity=0.107 Sum_probs=239.2
Q ss_pred CCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCCCCC-CCCCC
Q 013836 6 DPCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSETYQP-SKVAD 84 (435)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 84 (435)
++.+-..++|||+|++.++.||++|+++|+++|.++||+|++++++..... ....|+.+..++ ..++..... .....
T Consensus 12 ~~~~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~-~~~~G~~~~~~~-~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 12 SGHIEGRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEP-VRAAGATVVPYQ-SEIIDADAAEVFGSD 89 (415)
T ss_dssp -------CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHH-HHHTTCEEEECC-CSTTTCCHHHHHHSS
T ss_pred cCCcCcccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHH-HHhcCCEEEecc-ccccccccchhhccc
Confidence 344444557999999999999999999999999999999999998432222 223689999998 444322000 00001
Q ss_pred CHHHHHHH-HHHhcchHHHHHHHHHHhccCCcCCCCccEEEEc-CchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhhh
Q 013836 85 DIPALLLS-LNAKCIVPFRDCLANKLMSNAQESKDSFACLITD-AAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFPI 162 (435)
Q Consensus 85 ~~~~~~~~-~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 162 (435)
+....+.. +.......+.++.+.+.+ .+||+||+| ....++..+|+.+|||++.+.+....... +...+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~ 161 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDG-------DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQD 161 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSS-------SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhc-------cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccc
Confidence 11112222 223333333444444433 689999999 77888999999999999987754321100 000000
Q ss_pred hhhcCCCCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHh----------hhcccc-cEEEecchhhhchHH
Q 013836 163 LREKGYLPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRD----------SQIMAS-SGIIWNSFEDLEQVE 231 (435)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~l~ns~~~le~~~ 231 (435)
...... ...+. ........+.... ...... +..+....+.+++.
T Consensus 162 ~~~~~~---------~~~p~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~- 216 (415)
T 3rsc_A 162 MVTLAG---------TIDPL---------------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA- 216 (415)
T ss_dssp HHHHHT---------CCCGG---------------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-
T ss_pred cccccc---------cCChh---------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-
Confidence 000000 00000 0000011111110 111112 55666666666544
Q ss_pred HHHhhhhccCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccccCc---------cccCCCch--
Q 013836 232 LTAVHQQYYLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLARGA---------EWLEPLPK-- 300 (435)
Q Consensus 232 ~~~~~~~~~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~~---------~~~~~l~~-- 300 (435)
+.. ++.++.++||+...... ..+|....+.+++|||++|..... +++..++.
T Consensus 217 ----~~~--~~~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~ 279 (415)
T 3rsc_A 217 ----GDT--FDDRFVFVGPCFDDRRF-----------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHV 279 (415)
T ss_dssp ----GGG--CCTTEEECCCCCCCCGG-----------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEE
T ss_pred ----ccc--CCCceEEeCCCCCCccc-----------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEE
Confidence 444 44559999997653211 234555445678999999943211 01111211
Q ss_pred ----------hhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhc
Q 013836 301 ----------GILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWR 370 (435)
Q Consensus 301 ----------~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G 370 (435)
......++|+.+.+|+|+.++|+++++ +|||||.||+.||+++|+|+|++|...||+.||+++++ .|
T Consensus 280 v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~g 356 (415)
T 3rsc_A 280 VMTLGGQVDPAALGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-LG 356 (415)
T ss_dssp EEECTTTSCGGGGCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-HT
T ss_pred EEEeCCCCChHHhcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-cC
Confidence 111234679999999999999999999 99999999999999999999999999999999999999 59
Q ss_pred cEEEeCC-cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 371 VGLQLEG-KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 371 ~g~~~~~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
+|+.+.. .++++.|.++|.++|+| ++++++++++++++. ..++..++++.+++.+.+
T Consensus 357 ~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 357 LGAVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVR----RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp CEEECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHH
T ss_pred CEEEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhc
Confidence 9999987 78999999999999999 899999999999998 578888999988887764
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.8e-39 Score=316.27 Aligned_cols=361 Identities=13% Similarity=0.090 Sum_probs=233.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCCCCCCCCCCCHHHHHHHHH
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSETYQPSKVADDIPALLLSLN 94 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
|||+|++.++.||++|+++||++|+++||+|+|++++... ......|++|+.++ .......... ........+..+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~-~~v~~~g~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~- 76 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAE-ERLAEVGVPHVPVG-LPQHMMLQEG-MPPPPPEEEQRL- 76 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHTCCEEECS-CCGGGCCCTT-SCCCCHHHHHHH-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHH-HHHHHcCCeeeecC-CCHHHHHhhc-cccchhHHHHHH-
Confidence 7999999999999999999999999999999999995322 11123589999998 4432211100 011111111111
Q ss_pred HhcchHHHHHHHHHHhccCCcCCCCccEEEEcC-chhh--HHHHHHHcCCCeEEEcccchHHHHHHhhhhhhhhcCCCCC
Q 013836 95 AKCIVPFRDCLANKLMSNAQESKDSFACLITDA-AWFI--ALSVANDFKLPTIVLLTDSIAASLSYAAFPILREKGYLPI 171 (435)
Q Consensus 95 ~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (435)
....+.+.++.+.+.. .+||+||+|. +..+ +..+|+.+|||++.+.+.+..... .++|
T Consensus 77 --~~~~~~~~~~~l~~~~-----~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~~p- 137 (416)
T 1rrv_A 77 --AAMTVEMQFDAVPGAA-----EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PHLP- 137 (416)
T ss_dssp --HHHHHHHHHHHHHHHT-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSC-
T ss_pred --HHHHHHHHHHHHHHHh-----cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------cccC-
Confidence 1122234444444211 6899999996 5567 889999999999998776543210 0111
Q ss_pred CCCCCcccccCCCCCCcCCCCccccC--CCchHHHHHHHH------------hhhcccccEEEecchhhhchHHHHHhhh
Q 013836 172 QDFQLEAPVIEFPPLRVKDIPLLKTQ--DSNNADKVLSLR------------DSQIMASSGIIWNSFEDLEQVELTAVHQ 237 (435)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~------------~~~~~~~~~~l~ns~~~le~~~~~~~~~ 237 (435)
.. .. ++..+....+.+...... ........+... .+..... .+++|+++.++++ ++
T Consensus 138 ~~--~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-----~~ 207 (416)
T 1rrv_A 138 PA--YD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-----QP 207 (416)
T ss_dssp CC--BC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----CS
T ss_pred CC--CC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----CC
Confidence 00 00 000000000000000000 000000000111 1111233 6888999988865 44
Q ss_pred hccCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccccC--c--------cccCCCchhhH----
Q 013836 238 QYYLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLARG--A--------EWLEPLPKGIL---- 303 (435)
Q Consensus 238 ~~~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~--~--------~~~~~l~~~~~---- 303 (435)
. .++++|||++.+.. ++.+.++.+|++++ +++|||++|.+.. . +++..++..+.
T Consensus 208 ~----~~~~~vG~~~~~~~------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g 275 (416)
T 1rrv_A 208 D----VDAVQTGAWLLSDE------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRG 275 (416)
T ss_dssp S----CCCEECCCCCCCCC------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred C----CCeeeECCCccCcc------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeC
Confidence 3 26899999986532 22344588999864 4699999994421 0 00111111111
Q ss_pred ------hhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC
Q 013836 304 ------EMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG 377 (435)
Q Consensus 304 ------~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 377 (435)
...++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ .|+|+.++.
T Consensus 276 ~~~~~~~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~ 352 (416)
T 1rrv_A 276 WTELVLPDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDG 352 (416)
T ss_dssp TTTCCCSCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH-HTSEEECSS
T ss_pred CccccccCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH-CCCccCCCC
Confidence 224578999999999999988888 99999999999999999999999999999999999999 699999986
Q ss_pred -cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH-HHHH
Q 013836 378 -KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRL-TDHI 432 (435)
Q Consensus 378 -~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~-~~~~ 432 (435)
.++.++|.++|+++ +| ++|+++++++++++. ..++. ++++.+ ++.+
T Consensus 353 ~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 353 PTPTFESLSAALTTV-LA---PETRARAEAVAGMVL----TDGAA-AAADLVLAAVG 400 (416)
T ss_dssp SCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCC----CCHHH-HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHh----hcCcH-HHHHHHHHHHh
Confidence 79999999999999 88 899999999999888 45555 777777 5443
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.6e-37 Score=303.17 Aligned_cols=361 Identities=18% Similarity=0.196 Sum_probs=239.4
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCCCCC-CCCCCCHHHHH
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSETYQP-SKVADDIPALL 90 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 90 (435)
|++|||+|++.++.||++|++.|+++|+++||+|++++++..... ....|+.+..++ ..++..... .....+....+
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~-~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADE-VKAAGAEVVLYK-SEFDTFHVPEVVKQEDAETQL 79 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHH-HHHTTCEEEECC-CGGGTSSSSSSSCCTTHHHHH
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHH-HHHcCCEEEecc-cccccccccccccccchHHHH
Confidence 555799999999999999999999999999999999998432222 223689999988 433322000 11223334444
Q ss_pred HH-HHHhcchHHHHHHHHHHhccCCcCCCCccEEEEc-CchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhhhhhhcCC
Q 013836 91 LS-LNAKCIVPFRDCLANKLMSNAQESKDSFACLITD-AAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFPILREKGY 168 (435)
Q Consensus 91 ~~-~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 168 (435)
.. +.......+.++.+.+.+ .+||+||+| .+..++..+|+.+|||++.+.+....... +...+.......
T Consensus 80 ~~~~~~~~~~~~~~l~~~l~~-------~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~~~ 151 (402)
T 3ia7_A 80 HLVYVRENVAILRAAEEALGD-------NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKELWKSNG 151 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-------CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhc-------cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccccccccccc
Confidence 33 333333344444444443 789999999 77888999999999999987654332100 000000000000
Q ss_pred CCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHh----------hhcccc-cEEEecchhhhchHHHHHhhh
Q 013836 169 LPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRD----------SQIMAS-SGIIWNSFEDLEQVELTAVHQ 237 (435)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~l~ns~~~le~~~~~~~~~ 237 (435)
...+. ........+.+.. ...... +..+......+++. ..
T Consensus 152 ---------~~~~~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~ 202 (402)
T 3ia7_A 152 ---------QRHPA---------------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AE 202 (402)
T ss_dssp ---------CCCGG---------------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GG
T ss_pred ---------ccChh---------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cc
Confidence 00000 0000011111110 111111 45555555555543 44
Q ss_pred hccCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccccCcc---------ccCCCch--------
Q 013836 238 QYYLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLARGAE---------WLEPLPK-------- 300 (435)
Q Consensus 238 ~~~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~~~---------~~~~l~~-------- 300 (435)
. ++.++.+|||+...... ...|+...+.+++|||++|...... ++..++.
T Consensus 203 ~--~~~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 269 (402)
T 3ia7_A 203 T--FDERFAFVGPTLTGRDG-----------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGG 269 (402)
T ss_dssp G--CCTTEEECCCCCCC---------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCT
T ss_pred c--CCCCeEEeCCCCCCccc-----------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 4 34559999997654321 2235544456789999999432110 1111111
Q ss_pred ----hhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccC-CCchhHHHHHHHhhhccEEEe
Q 013836 301 ----GILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPY-FGDQMVNSRYVSHAWRVGLQL 375 (435)
Q Consensus 301 ----~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~-~~DQ~~na~~v~~~~G~g~~~ 375 (435)
......++|+.+.+|+|+.++|+++++ +|||||.||+.|++++|+|+|++|. ..||+.||.++++ .|+|+.+
T Consensus 270 ~~~~~~~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~g~~~ 346 (402)
T 3ia7_A 270 FLDPAVLGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGSVL 346 (402)
T ss_dssp TSCGGGGCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTSEEEC
T ss_pred cCChhhhCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCCEEEc
Confidence 111234678999999999999999999 9999999999999999999999999 9999999999999 5999999
Q ss_pred CC-cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 376 EG-KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 376 ~~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
.. .++++.|.++|.++|+| ++++++++++++++. +.++..++++.+++.+.+
T Consensus 347 ~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 347 RPDQLEPASIREAVERLAAD---SAVRERVRRMQRDIL----SSGGPARAADEVEAYLGR 399 (402)
T ss_dssp CGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHh----hCChHHHHHHHHHHHHhh
Confidence 87 78999999999999999 899999999999998 678888888888887653
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3.1e-38 Score=308.31 Aligned_cols=357 Identities=13% Similarity=0.102 Sum_probs=225.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCCCCCCCCCCCHHHHHHHHH
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSETYQPSKVADDIPALLLSLN 94 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
|||+|++.++.||++|+++|+++|.+|||+|++++++ .........|+.|..++ ...... . .............+.
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~-~~~~~v~~~g~~~~~l~-~~~~~~-~-~~~~~~~~~~~~~~~ 76 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPP-DYVERCAEVGVPMVPVG-RAVRAG-A-REPGELPPGAAEVVT 76 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECG-GGHHHHHHTTCCEEECS-SCSSGG-G-SCTTCCCTTCGGGHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCH-HHHHHHHHcCCceeecC-CCHHHH-h-ccccCCHHHHHHHHH
Confidence 7999999999999999999999999999999999984 33222233689999998 332211 0 000001111111111
Q ss_pred HhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhH---HHHHHHcCCCeEEEcccchHHHHHHhh-hhhhhhcCCCC
Q 013836 95 AKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIA---LSVANDFKLPTIVLLTDSIAASLSYAA-FPILREKGYLP 170 (435)
Q Consensus 95 ~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~-~~~~~~~~~~~ 170 (435)
. .+.+.++.+.+.. .+||+||+|.....+ ..+|+++|||++.+..++....+.... .....+.
T Consensus 77 ~----~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~---- 143 (404)
T 3h4t_A 77 E----VVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQ---- 143 (404)
T ss_dssp H----HHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHH----
T ss_pred H----HHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHH----
Confidence 1 1222222222211 469999998654333 789999999999888776531110000 0000000
Q ss_pred CCCCCCcccccCCC-CC-CcCCCCccccCCCchHHHHHHHHhhhcccccEEEecchhhhchHHHHHhhhhccCCCCeeee
Q 013836 171 IQDFQLEAPVIEFP-PL-RVKDIPLLKTQDSNNADKVLSLRDSQIMASSGIIWNSFEDLEQVELTAVHQQYYLSIPVFPI 248 (435)
Q Consensus 171 ~~~~~~~~~~~~~~-~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~pv~~v 248 (435)
..+..+.... .+ ....++. ... .. .. ...+..+.+..+.+.+. ++ ++..++++
T Consensus 144 ----~~~~~~~~~~~~~~~~lgl~~----~~~-~~-------~~-~~~~~~l~~~~~~l~p~-----~~---~~~~~~~~ 198 (404)
T 3h4t_A 144 ----GADRLFGDAVNSHRASIGLPP----VEH-LY-------DY-GYTDQPWLAADPVLSPL-----RP---TDLGTVQT 198 (404)
T ss_dssp ----HHHHHHHHHHHHHHHHTTCCC----CCC-HH-------HH-HHCSSCEECSCTTTSCC-----CT---TCCSCCBC
T ss_pred ----HHHHHhHHHHHHHHHHcCCCC----Ccc-hh-------hc-cccCCeEEeeCcceeCC-----CC---CCCCeEEe
Confidence 0000000000 00 0000000 000 00 00 01122355666666544 33 22338899
Q ss_pred CCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEecccc-Ccc-------ccCCCchhhHh----------hhcCCc
Q 013836 249 GPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLAR-GAE-------WLEPLPKGILE----------MVDGRG 310 (435)
Q Consensus 249 Gp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~-~~~-------~~~~l~~~~~~----------~~~~~~ 310 (435)
|++..+.. ... ++++.+|++. .+++||||||.+. ..+ ++..++..++. ..++|+
T Consensus 199 G~~~~~~~----~~~--~~~l~~~l~~--~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v 270 (404)
T 3h4t_A 199 GAWILPDQ----RPL--SAELEGFLRA--GSPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDC 270 (404)
T ss_dssp CCCCCCCC----CCC--CHHHHHHHHT--SSCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTE
T ss_pred CccccCCC----CCC--CHHHHHHHhc--CCCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCE
Confidence 98876532 223 3448899985 4579999999553 111 01111111110 125789
Q ss_pred eEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC-cCCHHHHHHHHH
Q 013836 311 YIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG-KLERKEIERAIL 389 (435)
Q Consensus 311 ~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~~~~~l~~~i~ 389 (435)
.+.+|+||.++|+++++ ||||||+||+.|++++|||+|++|+..||+.||+++++ .|+|+.+.. .+++++|.++|.
T Consensus 271 ~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~ 347 (404)
T 3h4t_A 271 LVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHDGPTPTVESLSAALA 347 (404)
T ss_dssp EEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSSSSCCHHHHHHHHH
T ss_pred EEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccCcCCCCHHHHHHHHH
Confidence 99999999999999888 99999999999999999999999999999999999999 699999987 789999999999
Q ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 390 RVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 390 ~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
++|+ ++|+++++++++.+. . .+..++++.+++.+.
T Consensus 348 ~ll~----~~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 348 TALT----PGIRARAAAVAGTIR----T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHTS----HHHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHH
T ss_pred HHhC----HHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHh
Confidence 9997 489999999999988 6 778888888877764
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.8e-36 Score=298.01 Aligned_cols=359 Identities=13% Similarity=0.094 Sum_probs=227.2
Q ss_pred CCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCC--CCCCC--------
Q 013836 10 LPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFS--ETYQP-------- 79 (435)
Q Consensus 10 ~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------- 79 (435)
..+..|||+|++.++.||++|+++|+++|+++||+|+|++++.. .......|+.|+.++ .... .....
T Consensus 16 ~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~-~~~v~~~G~~~~~i~-~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 16 PRGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPAL-TEDITAAGLTAVPVG-TDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp ---CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGG-HHHHHTTTCCEEECS-CCCCHHHHHHHTTHHHHHH
T ss_pred ccCCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchh-HHHHHhCCCceeecC-CccchHHHhhhhhcccccc
Confidence 34456999999999999999999999999999999999999542 222224689999998 4321 00000
Q ss_pred ---CC-----CC-CCHH---HHHHHHHHhcc-----h-HHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCC
Q 013836 80 ---SK-----VA-DDIP---ALLLSLNAKCI-----V-PFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKL 141 (435)
Q Consensus 80 ---~~-----~~-~~~~---~~~~~~~~~~~-----~-~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~gi 141 (435)
.. .. .... ..+..+...+. . .+.++++.+.+ .+||+||+|.+..++..+|+.+||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 94 VRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-------WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-------HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred cccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-------cCCCEEEecCcchhHHHHHHHcCC
Confidence 00 00 0111 11111211111 2 45555555544 579999999977889999999999
Q ss_pred CeEEEcccchHHHHHHhhhhhhhhcCCCCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHhhhcc-------
Q 013836 142 PTIVLLTDSIAASLSYAAFPILREKGYLPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRDSQIM------- 214 (435)
Q Consensus 142 P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------- 214 (435)
|++.+...+.........+.. ...+.+.. .......+.+........
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~--~~~~~~~~------------------------~~~~~~~~~l~~~~~~~g~~~~~~~ 220 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLG--LLPDQPEE------------------------HREDPLAEWLTWTLEKYGGPAFDEE 220 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHH--HGGGSCTT------------------------TCCCHHHHHHHHHHHHTTCCCCCGG
T ss_pred CEEEEecCCCcchhhhhhhhh--hccccccc------------------------cccchHHHHHHHHHHHcCCCCCCcc
Confidence 999986655332111110010 00010000 000111122222211110
Q ss_pred --cccEEEecchhhhchHHHHHhhhhccCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccccCc
Q 013836 215 --ASSGIIWNSFEDLEQVELTAVHQQYYLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLARGA 292 (435)
Q Consensus 215 --~~~~~l~ns~~~le~~~~~~~~~~~~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~~ 292 (435)
..+..+..+.+.++++ .. + +-..+++.... ...++.+|++..+++++|||++|.+...
T Consensus 221 ~~~~~~~l~~~~~~~~~~-----~~---~--~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~ 280 (441)
T 2yjn_A 221 VVVGQWTIDPAPAAIRLD-----TG---L--KTVGMRYVDYN----------GPSVVPEWLHDEPERRRVCLTLGISSRE 280 (441)
T ss_dssp GTSCSSEEECSCGGGSCC-----CC---C--CEEECCCCCCC----------SSCCCCGGGSSCCSSCEEEEEC------
T ss_pred ccCCCeEEEecCccccCC-----CC---C--CCCceeeeCCC----------CCcccchHhhcCCCCCEEEEECCCCccc
Confidence 1233444443444321 11 1 10112221111 1112567887656678999999964321
Q ss_pred -----cccCCCch-------hhH-----------hhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCe
Q 013836 293 -----EWLEPLPK-------GIL-----------EMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPM 349 (435)
Q Consensus 293 -----~~~~~l~~-------~~~-----------~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~ 349 (435)
+.+..+-+ .++ ...++|+.+.+|+||.++|+.+++ ||||||+||++||+++|||+
T Consensus 281 ~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~ 358 (441)
T 2yjn_A 281 NSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQ 358 (441)
T ss_dssp ----CCSTTTTHHHHHTSSSEEEECCCTTTTSSCSSCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCE
T ss_pred ccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhccCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCE
Confidence 11111111 111 123568899999999999999888 99999999999999999999
Q ss_pred eeccCCCchhHHHHHHHhhhccEEEeCC-cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 013836 350 ICQPYFGDQMVNSRYVSHAWRVGLQLEG-KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRL 428 (435)
Q Consensus 350 v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 428 (435)
|++|...||+.||+++++ .|+|+.++. ++++++|.++|.++|+| ++++++++++++++. ...+..++++.+
T Consensus 359 i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i 430 (441)
T 2yjn_A 359 VILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDML----AEPSPAEVVGIC 430 (441)
T ss_dssp EECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHH
T ss_pred EEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHH
Confidence 999999999999999999 599999987 78999999999999999 899999999999998 577788888888
Q ss_pred HHHHH
Q 013836 429 TDHIM 433 (435)
Q Consensus 429 ~~~~~ 433 (435)
++.+.
T Consensus 431 ~~~~~ 435 (441)
T 2yjn_A 431 EELAA 435 (441)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87664
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=9.6e-36 Score=293.32 Aligned_cols=363 Identities=14% Similarity=0.141 Sum_probs=233.5
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCCCCCCC-CCCCHHHHH
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSETYQPSK-VADDIPALL 90 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 90 (435)
|.+|||+|++.++.||++|++.|+++|.++||+|+++++...... ....|+.++.++ ..++....... ...+....+
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~-~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 82 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADK-VAATGPRPVLYH-STLPGPDADPEAWGSTLLDNV 82 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHH-HHTTSCEEEECC-CCSCCTTSCGGGGCSSHHHHH
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHH-HHhCCCEEEEcC-CcCccccccccccchhhHHHH
Confidence 566899999999999999999999999999999999999543211 123588999888 54433311100 012333333
Q ss_pred HHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhhhhhhcCCCC
Q 013836 91 LSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFPILREKGYLP 170 (435)
Q Consensus 91 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (435)
..+...+...+..+.+.+.+ .+||+||+|.+..++..+|+.+|||+|.+.+.+............+.
T Consensus 83 ~~~~~~~~~~~~~l~~~l~~-------~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~------ 149 (430)
T 2iyf_A 83 EPFLNDAIQALPQLADAYAD-------DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPM------ 149 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-------SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHH------
T ss_pred HHHHHHHHHHHHHHHHHhhc-------cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccch------
Confidence 33333333333444444433 68999999987778899999999999998765531100000000000
Q ss_pred CCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHH------HhhhcccccEEEecchhhhchHHHHHhhhhccCCCC
Q 013836 171 IQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSL------RDSQIMASSGIIWNSFEDLEQVELTAVHQQYYLSIP 244 (435)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~p 244 (435)
+.++.+.+... .. .....+...+ ..+....++.+++++.+.+++. ... ++.+
T Consensus 150 ------~~~~~~~~~~~------~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~--~~~~ 207 (430)
T 2iyf_A 150 ------WREPRQTERGR------AY---YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADR--VDED 207 (430)
T ss_dssp ------HHHHHHSHHHH------HH---HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGG--SCTT
T ss_pred ------hhhhccchHHH------HH---HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----ccc--CCCc
Confidence 00000000000 00 0000000000 0011124678899988887754 222 4456
Q ss_pred -eeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccccCc---------cccCCC-chhh-----------
Q 013836 245 -VFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLARGA---------EWLEPL-PKGI----------- 302 (435)
Q Consensus 245 -v~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~~---------~~~~~l-~~~~----------- 302 (435)
+++|||....... ..+|.+..+++++|||++|.+... +++..+ +..+
T Consensus 208 ~v~~vG~~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~ 276 (430)
T 2iyf_A 208 VYTFVGACQGDRAE-----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPA 276 (430)
T ss_dssp TEEECCCCC----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGG
T ss_pred cEEEeCCcCCCCCC-----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChH
Confidence 9999986532110 123554445678999999944310 112222 1111
Q ss_pred -HhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC-cCC
Q 013836 303 -LEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG-KLE 380 (435)
Q Consensus 303 -~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~~ 380 (435)
.+..++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||..|+.++++ .|+|+.+.. .++
T Consensus 277 ~l~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~ 353 (430)
T 2iyf_A 277 ELGELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKLATEEAT 353 (430)
T ss_dssp GGCSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCCC-CC
T ss_pred HhccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEEcCCCCCC
Confidence 1124578999999999999999999 99999999999999999999999999999999999999 599999987 689
Q ss_pred HHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 013836 381 RKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHI 432 (435)
Q Consensus 381 ~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 432 (435)
+++|.++|.++|+| ++++++++++++++.+ .++..++++.+++.+
T Consensus 354 ~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 354 ADLLRETALALVDD---PEVARRLRRIQAEMAQ----EGGTRRAADLIEAEL 398 (430)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HCHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHh
Confidence 99999999999999 8999999999998884 346666666665543
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=4.6e-35 Score=284.16 Aligned_cols=335 Identities=13% Similarity=0.088 Sum_probs=227.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCC-CCCCC----C-CCC-C--C
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFS-ETYQP----S-KVA-D--D 85 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~-~~~-~--~ 85 (435)
|||++++.++.||++|+++|+++|.++||+|++++++.. .......|+.++.++ .... ..... . ... . .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 78 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDM-GPVVTGVGLPAVATT-DLPIRHFITTDREGRPEAIPSDPV 78 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHTTCCEEESC-SSCHHHHHHBCTTSCBCCCCCSHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHH-HHHHHhCCCEEEEeC-CcchHHHHhhhcccCccccCcchH
Confidence 799999999999999999999999999999999998532 111123578888887 4320 00000 0 000 1 1
Q ss_pred HHHHH-HH-HHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHHhhhhhh
Q 013836 86 IPALL-LS-LNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSYAAFPIL 163 (435)
Q Consensus 86 ~~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (435)
....+ .. +...+...+.++.+.+.+ .+||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~---------- 141 (384)
T 2p6p_A 79 AQARFTGRWFARMAASSLPRMLDFSRA-------WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA---------- 141 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC----------
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhc-------cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc----------
Confidence 11111 21 112222334444444444 579999999877888899999999999876432100
Q ss_pred hhcCCCCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHhhh-----cccccEEEecchhhhchHHHHHhhhh
Q 013836 164 REKGYLPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRDSQ-----IMASSGIIWNSFEDLEQVELTAVHQQ 238 (435)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~ns~~~le~~~~~~~~~~ 238 (435)
. .. .......+.+.... ...++.+++++.+.++++ ++.
T Consensus 142 ------~----~~----------------------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~~ 184 (384)
T 2p6p_A 142 ------D----GI----------------------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPA-----NAA 184 (384)
T ss_dssp ------T----TT----------------------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----TSC
T ss_pred ------c----hh----------------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----CCC
Confidence 0 00 00000111111111 112567888888877754 221
Q ss_pred ccCC-CCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccccCc-------c-------ccCCCchhhH
Q 013836 239 YYLS-IPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLARGA-------E-------WLEPLPKGIL 303 (435)
Q Consensus 239 ~~~~-~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~~~-------~-------~~~~l~~~~~ 303 (435)
+ .++.+++. .. + .++.+|++.++++++|||++|.+... + ++..++..+.
T Consensus 185 ---~~~~~~~~~~---~~--------~--~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 248 (384)
T 2p6p_A 185 ---PARMMRHVAT---SR--------Q--CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELI 248 (384)
T ss_dssp ---CCEECCCCCC---CC--------C--CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEE
T ss_pred ---CCCceEecCC---CC--------C--CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEE
Confidence 1 12444421 10 1 12567887655678999999965321 1 1111111110
Q ss_pred -----------hhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccE
Q 013836 304 -----------EMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVG 372 (435)
Q Consensus 304 -----------~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g 372 (435)
...++|+.+ +|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||.++++ .|+|
T Consensus 249 ~~~g~~~~~~l~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~-~g~g 324 (384)
T 2p6p_A 249 VAAPDTVAEALRAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD-YGAA 324 (384)
T ss_dssp EECCHHHHHHHHHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSE
T ss_pred EEeCCCCHHhhCCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHH-CCCe
Confidence 124689999 99999999999888 99999999999999999999999999999999999999 5999
Q ss_pred EEeCC-cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 013836 373 LQLEG-KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHI 432 (435)
Q Consensus 373 ~~~~~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 432 (435)
+.++. .+++++|.++|.++|+| ++++++++++++++. ...+..++++.+++++
T Consensus 325 ~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 325 IALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREIS----GMPLPATVVTALEQLA 378 (384)
T ss_dssp EECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred EecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHh
Confidence 99986 78999999999999999 899999999999999 5778888888888765
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=6.9e-34 Score=277.21 Aligned_cols=340 Identities=13% Similarity=0.104 Sum_probs=206.8
Q ss_pred CCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCC--------CCCCCC
Q 013836 10 LPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSE--------TYQPSK 81 (435)
Q Consensus 10 ~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 81 (435)
.+.++|||+|++.++.||++|++.|+++|.++||+|++++++. ........|+.+..++ ..... ......
T Consensus 11 ~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~-~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~ 88 (398)
T 4fzr_A 11 PRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASEN-MGPTVTGAGLPFAPTC-PSLDMPEVLSWDREGNRTT 88 (398)
T ss_dssp ----CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGG-GHHHHHHTTCCEEEEE-SSCCHHHHHSBCTTSCBCC
T ss_pred CCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHhCCCeeEecC-CccchHhhhhhhccCcccc
Confidence 3445799999999999999999999999999999999999842 2222223678888887 31110 000000
Q ss_pred CCCCHHHHH----HHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHHH
Q 013836 82 VADDIPALL----LSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLSY 157 (435)
Q Consensus 82 ~~~~~~~~~----~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 157 (435)
........+ ..+.......++++.+.+.+ .+||+|++|....++..+|+.+|||++.+...........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 89 MPREEKPLLEHIGRGYGRLVLRMRDEALALAER-------WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 011111111 22222222333344444443 5799999998778899999999999998765532111000
Q ss_pred hhhhhhhhcCCCCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHhh-----hcccccEEEecchhhhchHHH
Q 013836 158 AAFPILREKGYLPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRDS-----QIMASSGIIWNSFEDLEQVEL 232 (435)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~ns~~~le~~~~ 232 (435)
.. ..+.+..... .....+..+......+...
T Consensus 162 ~~------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 197 (398)
T 4fzr_A 162 SA------------------------------------------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ-- 197 (398)
T ss_dssp HH------------------------------------------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----
T ss_pred HH------------------------------------------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC--
Confidence 00 0000000000 0112233444443444322
Q ss_pred HHhhhhccCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEecccc----------Ccc-------cc
Q 013836 233 TAVHQQYYLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLAR----------GAE-------WL 295 (435)
Q Consensus 233 ~~~~~~~~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~----------~~~-------~~ 295 (435)
... ...++.++++.. ...++.+|+...+.+++|||++|.+. ..+ ++
T Consensus 198 ---~~~--~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al 260 (398)
T 4fzr_A 198 ---PKP--GTTKMRYVPYNG------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQEL 260 (398)
T ss_dssp -----C--CCEECCCCCCCC------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHG
T ss_pred ---CCC--CCCCeeeeCCCC------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHH
Confidence 110 001122222110 11124567765556789999999652 111 11
Q ss_pred CCCchhh-----------HhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHH
Q 013836 296 EPLPKGI-----------LEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRY 364 (435)
Q Consensus 296 ~~l~~~~-----------~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~ 364 (435)
..++..+ ....++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||+.|+.+
T Consensus 261 ~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~ 338 (398)
T 4fzr_A 261 PKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARL 338 (398)
T ss_dssp GGGTCEEEECCCC--------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHH
T ss_pred HhCCCEEEEEeCCcchhhhccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHH
Confidence 1111111 1234678999999999999999999 99999999999999999999999999999999999
Q ss_pred HHhhhccEEEeCC-cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013836 365 VSHAWRVGLQLEG-KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLT 429 (435)
Q Consensus 365 v~~~~G~g~~~~~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 429 (435)
+++ .|+|+.+.. .++++.|.++|.++|+| +++++++++.++++. +..+..+.++.++
T Consensus 339 ~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 339 LHA-AGAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMA----TLPTPADIVRLIE 396 (398)
T ss_dssp HHH-TTSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHT----TSCCHHHHHHHHT
T ss_pred HHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHh
Confidence 999 599999987 78999999999999999 899999999999998 5666666666554
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.7e-33 Score=272.97 Aligned_cols=338 Identities=15% Similarity=0.153 Sum_probs=216.7
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCC--C-----------
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSET--Y----------- 77 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------- 77 (435)
+.++|||+|++.++.||++|+++|+++|.++||+|+++++ . ........|+.+..++ ...... +
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~-~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 93 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-E-HADRAAAAGLEVVDVA-PDYSAVKVFEQVAKDNPRFA 93 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-S-CHHHHHTTTCEEEESS-TTCCHHHHHHHHHHHCHHHH
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-c-hHHHHHhCCCeeEecC-CccCHHHHhhhcccCCcccc
Confidence 3356999999999999999999999999999999999998 3 2222234689999988 321100 0
Q ss_pred -----CCCCCCCCHHHHHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchH
Q 013836 78 -----QPSKVADDIPALLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIA 152 (435)
Q Consensus 78 -----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~ 152 (435)
............+ .......+.++.+.+.+ .+||+||+|....++..+|+.+|||++.+......
T Consensus 94 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~-------~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~ 163 (398)
T 3oti_A 94 ETVATRPAIDLEEWGVQI---AAVNRPLVDGTMALVDD-------YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR 163 (398)
T ss_dssp HTGGGSCCCSGGGGHHHH---HHHHGGGHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC
T ss_pred ccccCChhhhHHHHHHHH---HHHHHHHHHHHHHHHHH-------cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC
Confidence 0001111112222 22223334444444444 57999999988888999999999999986543211
Q ss_pred HHHHHhhhhhhhhcCCCCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHhhhcccccEEEecchhhhchHHH
Q 013836 153 ASLSYAAFPILREKGYLPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRDSQIMASSGIIWNSFEDLEQVEL 232 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~ 232 (435)
.... .... .........+..-.....+..+......+..+
T Consensus 164 ~~~~----~~~~----------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 203 (398)
T 3oti_A 164 TRGM----HRSI----------------------------------ASFLTDLMDKHQVSLPEPVATIESFPPSLLLE-- 203 (398)
T ss_dssp CTTH----HHHH----------------------------------HTTCHHHHHHTTCCCCCCSEEECSSCGGGGTT--
T ss_pred ccch----hhHH----------------------------------HHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC--
Confidence 0000 0000 00000011111000112233444333333321
Q ss_pred HHhhhhccCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEeccc----cCcc-------ccCCCch-
Q 013836 233 TAVHQQYYLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLA----RGAE-------WLEPLPK- 300 (435)
Q Consensus 233 ~~~~~~~~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v----~~~~-------~~~~l~~- 300 (435)
... ...|+.++ |. . ....+.+|+...+.+++|||++|.+ ...+ ++..++.
T Consensus 204 ---~~~--~~~~~~~~-~~--~----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (398)
T 3oti_A 204 ---AEP--EGWFMRWV-PY--G----------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDAD 265 (398)
T ss_dssp ---SCC--CSBCCCCC-CC--C----------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSE
T ss_pred ---CCC--CCCCcccc-CC--C----------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCE
Confidence 100 00112221 10 0 0111445666555678999999944 1111 0111111
Q ss_pred ----------hhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHH--HHHHhh
Q 013836 301 ----------GILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNS--RYVSHA 368 (435)
Q Consensus 301 ----------~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na--~~v~~~ 368 (435)
......++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||+.|| .++++
T Consensus 266 ~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~- 342 (398)
T 3oti_A 266 FVLALGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR- 342 (398)
T ss_dssp EEEECTTSCCGGGCSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH-
T ss_pred EEEEECCcChhhhccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH-
Confidence 111234679999999999999999999 999999999999999999999999999999999 99999
Q ss_pred hccEEEeCC-cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 369 WRVGLQLEG-KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 369 ~G~g~~~~~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
.|+|+.++. .++++.|. ++|+| ++++++++++++++. ...+..++++.+++.+.
T Consensus 343 ~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 343 RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMV----ALPTPAETVRRIVERIS 397 (398)
T ss_dssp HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHHC
T ss_pred CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHhc
Confidence 599999987 77888877 88899 999999999999998 67888888888877653
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=9.2e-32 Score=261.50 Aligned_cols=339 Identities=15% Similarity=0.164 Sum_probs=216.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEc-cCCCC--CCCCCC-----C--CCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSF-SDDGF--SETYQP-----S--KVA 83 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~-----~--~~~ 83 (435)
+|||+|++.++.||++|++.|+++|.++||+|++++++. ........|+.+..+ + ... ...... . ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~-~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 78 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPE-LQATAHGAGLTTAGIRG-NDRTGDTGGTTQLRFPNPAFGQ 78 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHH-HHHHHHHBTCEEEEC---------------CCSCCGGGGC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChh-hHHHHHhCCCceeeecC-Cccchhhhhhhccccccccccc
Confidence 599999999999999999999999999999999999842 111112357888888 4 211 100000 0 000
Q ss_pred CCHHHHHHHHHHhcchH-------HHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchHHHHH
Q 013836 84 DDIPALLLSLNAKCIVP-------FRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIAASLS 156 (435)
Q Consensus 84 ~~~~~~~~~~~~~~~~~-------l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 156 (435)
.........+....... +.++.+.+.+ .+||+|++|.+.+++..+|+.+|||++.+..........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~ 151 (391)
T 3tsa_A 79 RDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-------WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAGP 151 (391)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTTH
T ss_pred ccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-------cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccccc
Confidence 00011111111111122 3444444444 579999999877888899999999999876443211000
Q ss_pred HhhhhhhhhcCCCCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHhhhc-----ccccEEEecchhhhchHH
Q 013836 157 YAAFPILREKGYLPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRDSQI-----MASSGIIWNSFEDLEQVE 231 (435)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~ns~~~le~~~ 231 (435)
. .......+....... ...+..+.....+++..
T Consensus 152 ~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (391)
T 3tsa_A 152 F-----------------------------------------SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS- 189 (391)
T ss_dssp H-----------------------------------------HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-
T ss_pred c-----------------------------------------cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-
Confidence 0 000111111111111 11244454444444322
Q ss_pred HHHhhhhccCCCCeeeeCCCccCCCCCCCCCCcccchhhhhhhcCCCCcEEEEEecccc----C-c-------cccCCCc
Q 013836 232 LTAVHQQYYLSIPVFPIGPFHKCFPASSSSLLSQDQSSISWLDKQAPRSVIYVSFGLAR----G-A-------EWLEPLP 299 (435)
Q Consensus 232 ~~~~~~~~~~~~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G~v~----~-~-------~~~~~l~ 299 (435)
... ...++.++ |.. ....+..|+...+.+++|+|++|... . . +. ..+|
T Consensus 190 ----~~~--~~~~~~~~-p~~------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p 249 (391)
T 3tsa_A 190 ----DAP--QGAPVQYV-PYN------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELP 249 (391)
T ss_dssp ----TSC--CCEECCCC-CCC------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTST
T ss_pred ----CCC--ccCCeeee-cCC------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCC
Confidence 111 00113333 110 01113467765556789999999541 1 1 11 2232
Q ss_pred h-hh-----------HhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHh
Q 013836 300 K-GI-----------LEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSH 367 (435)
Q Consensus 300 ~-~~-----------~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~ 367 (435)
+ .+ ....++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||+.|+.++++
T Consensus 250 ~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~ 327 (391)
T 3tsa_A 250 GVEAVIAVPPEHRALLTDLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA 327 (391)
T ss_dssp TEEEEEECCGGGGGGCTTCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH
T ss_pred CeEEEEEECCcchhhcccCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHH
Confidence 1 11 0123578999999999999999988 99999999999999999999999999999999999999
Q ss_pred hhccEEEeCC---cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 368 AWRVGLQLEG---KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 368 ~~G~g~~~~~---~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
.|+|+.+.. ..+++.|.++|.++|+| ++++++++++++++. +..+..++++.+++.+.
T Consensus 328 -~g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 328 -AGAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEIT----AMPHPAALVRTLENTAA 388 (391)
T ss_dssp -TTSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHH----TSCCHHHHHHHHHHC--
T ss_pred -cCCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHh
Confidence 599999874 48999999999999999 899999999999998 67888888888876554
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=8.6e-30 Score=249.24 Aligned_cols=346 Identities=16% Similarity=0.162 Sum_probs=217.5
Q ss_pred CCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCC--------CC
Q 013836 7 PCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSET--------YQ 78 (435)
Q Consensus 7 ~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 78 (435)
.++..-++|||+|++.++.||++|++.|+++|.++||+|++++++. ........|+.+..++ ..+... +.
T Consensus 13 ~~~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~-~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 13 SGHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEG-FAGTLRKLGFEPVATG-MPVFDGFLAALRIRFD 90 (412)
T ss_dssp -----CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGG-GHHHHHHTTCEEEECC-CCHHHHHHHHHHHHHS
T ss_pred cCCcccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHH-HHHHHHhcCCceeecC-cccccchhhhhhhhhc
Confidence 3344446899999999999999999999999999999999999853 2111223588888888 310000 00
Q ss_pred C-CCCCCCHHHH----HHHHHHh-cchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccchH
Q 013836 79 P-SKVADDIPAL----LLSLNAK-CIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSIA 152 (435)
Q Consensus 79 ~-~~~~~~~~~~----~~~~~~~-~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~~ 152 (435)
. .......... ...+... ....+..+.+.+.+ .+||+||+|....++..+|+.+|||+|.+......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 163 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-------LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT 163 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-------cCCCEEEECchhhHHHHHHHHcCCCEEEecccccC
Confidence 0 0000111111 1111111 11122333444443 57999999987777888999999999986544221
Q ss_pred HHHHHhhhhhhhhcCCCCCCCCCCcccccCCCCCCcCCCCccccCCCchHHHHHHHHhhh----------cccccEEEec
Q 013836 153 ASLSYAAFPILREKGYLPIQDFQLEAPVIEFPPLRVKDIPLLKTQDSNNADKVLSLRDSQ----------IMASSGIIWN 222 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~n 222 (435)
...... .....+.+.... ...++.++..
T Consensus 164 ~~~~~~------------------------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~ 201 (412)
T 3otg_A 164 PDDLTR------------------------------------------SIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDI 201 (412)
T ss_dssp CSHHHH------------------------------------------HHHHHHHHHHHHTTCCCCSSCCGGGGCCEEEC
T ss_pred chhhhH------------------------------------------HHHHHHHHHHHHcCCCCCcccccCCCCeEEee
Confidence 000000 000000100000 1234455555
Q ss_pred chhhhchHHHHHhhhhccCC---CCeeeeCCCccCCCCCCCCCCcccchhhhh-hhcCCCCcEEEEEeccccCc--c---
Q 013836 223 SFEDLEQVELTAVHQQYYLS---IPVFPIGPFHKCFPASSSSLLSQDQSSISW-LDKQAPRSVIYVSFGLARGA--E--- 293 (435)
Q Consensus 223 s~~~le~~~~~~~~~~~~~~---~pv~~vGp~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vV~vs~G~v~~~--~--- 293 (435)
+...++.. ... +. .|+.++++- . ..+..+| ....+.+++|++++|..... +
T Consensus 202 ~~~~~~~~-----~~~--~~~~~~~~~~~~~~---~----------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~ 261 (412)
T 3otg_A 202 FPPSLQEP-----EFR--ARPRRHELRPVPFA---E----------QGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLR 261 (412)
T ss_dssp SCGGGSCH-----HHH--TCTTEEECCCCCCC---C----------CCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHH
T ss_pred CCHHhcCC-----ccc--CCCCcceeeccCCC---C----------CCCCCCccccccCCCCEEEEEcCCCCcCcHHHHH
Confidence 54444422 111 00 112222211 0 0113345 22224567899999943110 0
Q ss_pred ----ccCCCc------------hhhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCc
Q 013836 294 ----WLEPLP------------KGILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGD 357 (435)
Q Consensus 294 ----~~~~l~------------~~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~D 357 (435)
.+...+ .+..+..++|+.+.+|+|+.++|+++++ ||+|||.||+.||+++|+|+|++|...|
T Consensus 262 ~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~ 339 (412)
T 3otg_A 262 AAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGD 339 (412)
T ss_dssp HHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred HHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchh
Confidence 000000 0111134578999999999999999999 9999999999999999999999999999
Q ss_pred hhHHHHHHHhhhccEEEeCC-cCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 358 QMVNSRYVSHAWRVGLQLEG-KLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 358 Q~~na~~v~~~~G~g~~~~~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
|..|+.++++ .|+|..+.. .++++.|.++|.++|+| +++++++.+.+.++. +..+..+.++.+++.+.
T Consensus 340 q~~~~~~v~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 340 SFANAQAVAQ-AGAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIA----AMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHHHHHHH-HTSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HSCCHHHHHTTHHHHHC
T ss_pred HHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHhc
Confidence 9999999999 599999987 78999999999999999 899999999999988 46688888888877664
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=3e-26 Score=220.03 Aligned_cols=118 Identities=12% Similarity=0.129 Sum_probs=92.3
Q ss_pred hhcCCceEEeecchh-hhhcCCccceEeeccCccchHHHHhhCCCeeeccC----CCchhHHHHHHHhhhccEEEeCC-c
Q 013836 305 MVDGRGYIVKWAPQQ-QVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPY----FGDQMVNSRYVSHAWRVGLQLEG-K 378 (435)
Q Consensus 305 ~~~~~~~~~~~~p~~-~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~----~~DQ~~na~~v~~~~G~g~~~~~-~ 378 (435)
..+.++.+.+|+++. ++|+.+++ +|||+|.+|+.|++++|+|+|++|+ ..+|..||+.+++ .|+|+.+.. .
T Consensus 232 ~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~-~G~a~~l~~~~ 308 (365)
T 3s2u_A 232 TVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR-SGAGRLLPQKS 308 (365)
T ss_dssp HTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT-TTSEEECCTTT
T ss_pred ccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH-CCCEEEeecCC
Confidence 345788899999975 89999999 9999999999999999999999997 3589999999999 599999987 8
Q ss_pred CCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 013836 379 LERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHI 432 (435)
Q Consensus 379 ~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 432 (435)
++++.|.++|.++|+| ++.+++..+-+.++. ...+..+.++.+++..
T Consensus 309 ~~~~~L~~~i~~ll~d---~~~~~~m~~~a~~~~----~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 309 TGAAELAAQLSEVLMH---PETLRSMADQARSLA----KPEATRTVVDACLEVA 355 (365)
T ss_dssp CCHHHHHHHHHHHHHC---THHHHHHHHHHHHTC----CTTHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHCC---HHHHHHHHHHHHhcC----CccHHHHHHHHHHHHH
Confidence 9999999999999999 454443333333332 3344455555555443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.89 E-value=3.6e-23 Score=176.67 Aligned_cols=143 Identities=24% Similarity=0.408 Sum_probs=114.9
Q ss_pred cchhhhhhhcCCCCcEEEEEeccccC--c--------cccCCCchhhH--------hhhcCCceEEeecchhhhhcCCcc
Q 013836 266 DQSSISWLDKQAPRSVIYVSFGLARG--A--------EWLEPLPKGIL--------EMVDGRGYIVKWAPQQQVLAHPAV 327 (435)
Q Consensus 266 ~~~l~~~l~~~~~~~vV~vs~G~v~~--~--------~~~~~l~~~~~--------~~~~~~~~~~~~~p~~~ll~~~~v 327 (435)
+.++.+|++..+++++|||++|.... . +++..++..+. +.+++|+.+.+|+||.++|.|+.+
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~a 87 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKT 87 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHHHTSTTE
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHHhcCCCc
Confidence 34599999876667899999995421 1 11222222222 124568999999999999966666
Q ss_pred ceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC-cCCHHHHHHHHHHHHcCCchHHHHHHHHH
Q 013836 328 GCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG-KLERKEIERAILRVMVKADSQEMRERATY 406 (435)
Q Consensus 328 ~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~ 406 (435)
.+||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.++. .++.++|.++|.++++| ++|++++++
T Consensus 88 d~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~a~~ 163 (170)
T 2o6l_A 88 RAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKRVIND---PSYKENVMK 163 (170)
T ss_dssp EEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHH
T ss_pred CEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHHHHcC---HHHHHHHHH
Confidence 6699999999999999999999999999999999999999 599999987 78999999999999999 899999999
Q ss_pred HHHHHH
Q 013836 407 LNEKVD 412 (435)
Q Consensus 407 l~~~~~ 412 (435)
+++.++
T Consensus 164 ~~~~~~ 169 (170)
T 2o6l_A 164 LSRIQH 169 (170)
T ss_dssp HC----
T ss_pred HHHHhh
Confidence 999886
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.79 E-value=7.6e-18 Score=161.47 Aligned_cols=115 Identities=12% Similarity=0.114 Sum_probs=93.2
Q ss_pred CCceEEeecch-hhhhcCCccceEeeccCccchHHHHhhCCCeeeccCC---CchhHHHHHHHhhhccEEEeCC-cCCHH
Q 013836 308 GRGYIVKWAPQ-QQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYF---GDQMVNSRYVSHAWRVGLQLEG-KLERK 382 (435)
Q Consensus 308 ~~~~~~~~~p~-~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~g~~~~~-~~~~~ 382 (435)
+|+.+.+|+++ .++++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..++. .++.+
T Consensus 237 ~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~~d~~~~ 313 (364)
T 1f0k_A 237 PQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQPQLSVD 313 (364)
T ss_dssp TTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCGGGCCHH
T ss_pred CceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEeccccCCHH
Confidence 58999999954 589999999 99999989999999999999999987 7999999999994 99998887 67799
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 383 EIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 383 ~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
+|.++|.++ | ++.+++..+-+.++. +..+..+.++.+++..++
T Consensus 314 ~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 314 AVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHH
Confidence 999999998 6 566655554444433 445566777777766554
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.45 E-value=1.8e-12 Score=118.35 Aligned_cols=66 Identities=5% Similarity=-0.017 Sum_probs=61.3
Q ss_pred CCceEEeecchh-hhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC
Q 013836 308 GRGYIVKWAPQQ-QVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG 377 (435)
Q Consensus 308 ~~~~~~~~~p~~-~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 377 (435)
.|+.+.+|+++. ++|..+++ +|++|| +|++|+++.|+|+|++|...+|..||+.+++ .|++..+..
T Consensus 208 ~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 208 NNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp SSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred CCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 488889999877 89999999 999999 8999999999999999999999999999999 599998875
No 24
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.42 E-value=9e-11 Score=114.97 Aligned_cols=97 Identities=16% Similarity=0.133 Sum_probs=71.3
Q ss_pred cCCceEEeecchh---hhhcCCccceEeec----cCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcC
Q 013836 307 DGRGYIVKWAPQQ---QVLAHPAVGCFWTH----SGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKL 379 (435)
Q Consensus 307 ~~~~~~~~~~p~~---~ll~~~~v~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~ 379 (435)
.+++.+.+|+|+. +++..+++ +|.- |.-+++.||+++|+|+|+.+. ......+.+. +.|+.++. -
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-~ 376 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-H 376 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS-C
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC-C
Confidence 4689999999865 67788998 7754 334589999999999999764 3445566663 68888876 7
Q ss_pred CHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHH
Q 013836 380 ERKEIERAILRVMVKAD-SQEMRERATYLNEKV 411 (435)
Q Consensus 380 ~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~ 411 (435)
+.++|.++|.++++|.+ ...+.+++++..+++
T Consensus 377 d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 409 (438)
T 3c48_A 377 SPHAWADALATLLDDDETRIRMGEDAVEHARTF 409 (438)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC
Confidence 89999999999999832 234445555555443
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.32 E-value=1.8e-10 Score=111.02 Aligned_cols=114 Identities=20% Similarity=0.146 Sum_probs=79.1
Q ss_pred hcCCceEEeecchh---hhhcCCccceEee-----------ccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhcc
Q 013836 306 VDGRGYIVKWAPQQ---QVLAHPAVGCFWT-----------HSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRV 371 (435)
Q Consensus 306 ~~~~~~~~~~~p~~---~ll~~~~v~~~I~-----------HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 371 (435)
+.+++.+.+|+|+. +++..+++ +|. -|.-+++.||+++|+|+|+.+..+ ....+.+ |.
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i~~--~~ 322 (394)
T 3okp_A 251 VSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETVTP--AT 322 (394)
T ss_dssp GGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGCCT--TT
T ss_pred ccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHHhc--CC
Confidence 35789999999866 46788998 776 566678999999999999977532 2223333 57
Q ss_pred EEEeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHH-HHHHHHHHHhcCCChHHHHHHHHHHHHcC
Q 013836 372 GLQLEGKLERKEIERAILRVMVKADSQEMRERATY-LNEKVDICLQQGGSSYQSLGRLTDHIMSL 435 (435)
Q Consensus 372 g~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~-l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 435 (435)
|+.++. -+.++|.++|.++++| ++.+++..+ ..+.+. +.-+....++.+.+.++++
T Consensus 323 g~~~~~-~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 323 GLVVEG-SDVDKLSELLIELLDD---PIRRAAMGAAGRAHVE----AEWSWEIMGERLTNILQSE 379 (394)
T ss_dssp EEECCT-TCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHH----HHTBHHHHHHHHHHHHHSC
T ss_pred ceEeCC-CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHHHh
Confidence 887776 7899999999999998 443332222 222222 2234677777777777664
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.29 E-value=8.8e-10 Score=107.65 Aligned_cols=112 Identities=14% Similarity=0.111 Sum_probs=78.6
Q ss_pred hcCCceEEeecchh---hhhcCCccceEee----ccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCc
Q 013836 306 VDGRGYIVKWAPQQ---QVLAHPAVGCFWT----HSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGK 378 (435)
Q Consensus 306 ~~~~~~~~~~~p~~---~ll~~~~v~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~ 378 (435)
.++++.+.+|+|+. +++..+++ +|. -|--+++.||+++|+|+|+... ......+.. |.|..++.
T Consensus 309 ~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~- 379 (439)
T 3fro_A 309 HGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKA- 379 (439)
T ss_dssp CTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEECT-
T ss_pred cCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC-
Confidence 34444556889886 46788888 773 2444689999999999999754 334444434 78888886
Q ss_pred CCHHHHHHHHHHHHc-CCc-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 379 LERKEIERAILRVMV-KAD-SQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 379 ~~~~~l~~~i~~vl~-~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
-+.+++.++|.++++ |.+ ...+.+++++..+. -+....++.+++.+++
T Consensus 380 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~--------~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 380 GDPGELANAILKALELSRSDLSKFRENCKKRAMS--------FSWEKSAERYVKAYTG 429 (439)
T ss_dssp TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT--------SCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh--------CcHHHHHHHHHHHHHH
Confidence 789999999999998 643 45566666555543 3456777777776665
No 27
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.24 E-value=3.8e-10 Score=109.16 Aligned_cols=113 Identities=7% Similarity=0.093 Sum_probs=78.2
Q ss_pred cCCceEEeecchh---hhhcCCccceEee----ccCcc-chHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCc
Q 013836 307 DGRGYIVKWAPQQ---QVLAHPAVGCFWT----HSGWN-STLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGK 378 (435)
Q Consensus 307 ~~~~~~~~~~p~~---~ll~~~~v~~~I~----HGG~g-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~ 378 (435)
.+++.+.+++++. +++..+++ +|. +.|.| ++.||+++|+|+|+.+. ......+.+. +.|+..+.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-
Confidence 5788889999875 77888998 773 44544 89999999999999765 5556667763 78888876
Q ss_pred CCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 379 LERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 379 ~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
-+.+++.++|.++++| ++.+++..+-+.+.. . .-+....++.+++.+++
T Consensus 334 ~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~---~-~~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 334 DDADGMAAALIGILED---DQLRAGYVARASERV---H-RYDWSVVSAQIMRVYET 382 (406)
T ss_dssp TCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHG---G-GGBHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH---H-hCCHHHHHHHHHHHHHH
Confidence 7899999999999998 554433322222221 1 23445555555555543
No 28
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.22 E-value=2.7e-12 Score=112.46 Aligned_cols=76 Identities=12% Similarity=0.020 Sum_probs=65.2
Q ss_pred CceEEeecchh-hhhc-CCccceEeeccCccchHHHHhhCCCeeeccCC----CchhHHHHHHHhhhccEEEeCCcCCHH
Q 013836 309 RGYIVKWAPQQ-QVLA-HPAVGCFWTHSGWNSTLESICEGIPMICQPYF----GDQMVNSRYVSHAWRVGLQLEGKLERK 382 (435)
Q Consensus 309 ~~~~~~~~p~~-~ll~-~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~~G~g~~~~~~~~~~ 382 (435)
++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++++ .|+++.+ +++
T Consensus 115 ~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~-~G~~~~~----~~~ 187 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE-LGYVWSC----APT 187 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH-HSCCCEE----CSC
T ss_pred eEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH-CCCEEEc----CHH
Confidence 34456888775 8999 9999 99999999999999999999999974 469999999999 5998765 557
Q ss_pred HHHHHHHHH
Q 013836 383 EIERAILRV 391 (435)
Q Consensus 383 ~l~~~i~~v 391 (435)
.|.++|.++
T Consensus 188 ~L~~~i~~l 196 (224)
T 2jzc_A 188 ETGLIAGLR 196 (224)
T ss_dssp TTTHHHHHH
T ss_pred HHHHHHHHH
Confidence 788888777
No 29
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.09 E-value=2.5e-08 Score=99.28 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=62.1
Q ss_pred cCCceEEeecchh---hhhcCC----ccceEeec----cCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEe
Q 013836 307 DGRGYIVKWAPQQ---QVLAHP----AVGCFWTH----SGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQL 375 (435)
Q Consensus 307 ~~~~~~~~~~p~~---~ll~~~----~v~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~ 375 (435)
.++|.+.+++|+. +++..+ ++ +|.- |--.++.||+++|+|+|+... ......+.+. ..|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 4689999999765 567788 88 7732 334588999999999999864 3444556663 578888
Q ss_pred CCcCCHHHHHHHHHHHHcC
Q 013836 376 EGKLERKEIERAILRVMVK 394 (435)
Q Consensus 376 ~~~~~~~~l~~~i~~vl~~ 394 (435)
+. -+.++|+++|.++++|
T Consensus 407 ~~-~d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 407 DP-EDPEDIARGLLKAFES 424 (499)
T ss_dssp CT-TCHHHHHHHHHHHHSC
T ss_pred CC-CCHHHHHHHHHHHHhC
Confidence 76 7899999999999998
No 30
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.08 E-value=2.6e-08 Score=95.97 Aligned_cols=113 Identities=15% Similarity=0.152 Sum_probs=75.7
Q ss_pred cCCceEEeecch-hhhhcCCccceEe----eccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCH
Q 013836 307 DGRGYIVKWAPQ-QQVLAHPAVGCFW----THSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLER 381 (435)
Q Consensus 307 ~~~~~~~~~~p~-~~ll~~~~v~~~I----~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~ 381 (435)
.+++.+.++..+ .+++..+++ +| .-|.-+++.||+++|+|+|+.+..+ ....+.+. +.|+..+. -+.
T Consensus 266 ~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~-~~g~~~~~-~d~ 337 (394)
T 2jjm_A 266 EDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHG-DTGYLCEV-GDT 337 (394)
T ss_dssp GGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBT-TTEEEECT-TCH
T ss_pred CCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcC-CceEEeCC-CCH
Confidence 367777776543 378889999 88 5566779999999999999987532 22334442 67888776 789
Q ss_pred HHHHHHHHHHHcCCchHHHHHHH-HHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 382 KEIERAILRVMVKADSQEMRERA-TYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 382 ~~l~~~i~~vl~~~~~~~~~~~a-~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
++|.++|.++++| ++.+++. +..++.+. +.-+....++.+++.+++
T Consensus 338 ~~la~~i~~l~~~---~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 338 TGVADQAIQLLKD---EELHRNMGERARESVY----EQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp HHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC---HHHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHHH
Confidence 9999999999998 4433322 22222221 223456666666666654
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.05 E-value=1.5e-09 Score=105.06 Aligned_cols=108 Identities=13% Similarity=0.143 Sum_probs=79.5
Q ss_pred CCceEEeecch---hhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHH
Q 013836 308 GRGYIVKWAPQ---QQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEI 384 (435)
Q Consensus 308 ~~~~~~~~~p~---~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l 384 (435)
+++.+.+++++ ..+++.+++ +|+-.|.. +.||.++|+|+|++|-..+++. +.+. |.|+.+. .++++|
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~--~d~~~l 351 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG--TNKENL 351 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC--SCHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC--CCHHHH
Confidence 58888888864 368888998 99887532 2699999999999976666554 2353 8887765 389999
Q ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 013836 385 ERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHI 432 (435)
Q Consensus 385 ~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 432 (435)
.+++.++++| ++.+++..+.+..+ +.|+++.+.++.+.+.+
T Consensus 352 ~~ai~~ll~~---~~~~~~m~~~~~~~----g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 352 IKEALDLLDN---KESHDKMAQAANPY----GDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHC---HHHHHHHHHSCCTT----CCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC---HHHHHHHHhhcCcc----cCCcHHHHHHHHHHHHh
Confidence 9999999998 66665554433333 36777788877777665
No 32
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.01 E-value=2.1e-07 Score=88.58 Aligned_cols=88 Identities=11% Similarity=0.243 Sum_probs=67.9
Q ss_pred cCCceEEeecch-hhhhcCCccceEee----ccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCH
Q 013836 307 DGRGYIVKWAPQ-QQVLAHPAVGCFWT----HSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLER 381 (435)
Q Consensus 307 ~~~~~~~~~~p~-~~ll~~~~v~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~ 381 (435)
.+|+.+.++..+ .+++..+++ +|. -|.-+++.||+++|+|+|+.... .+...+.+. +.|..++..-+.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~~~~~ 324 (374)
T 2iw1_A 252 RSNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADA-NCGTVIAEPFSQ 324 (374)
T ss_dssp GGGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHH-TCEEEECSSCCH
T ss_pred CCcEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccC-CceEEeCCCCCH
Confidence 468888887544 378888998 775 56777899999999999998763 345567774 889988733789
Q ss_pred HHHHHHHHHHHcCCchHHHHHHH
Q 013836 382 KEIERAILRVMVKADSQEMRERA 404 (435)
Q Consensus 382 ~~l~~~i~~vl~~~~~~~~~~~a 404 (435)
+++.++|.++++| ++.+++.
T Consensus 325 ~~l~~~i~~l~~~---~~~~~~~ 344 (374)
T 2iw1_A 325 EQLNEVLRKALTQ---SPLRMAW 344 (374)
T ss_dssp HHHHHHHHHHHHC---HHHHHHH
T ss_pred HHHHHHHHHHHcC---hHHHHHH
Confidence 9999999999998 5544433
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.01 E-value=1.6e-09 Score=104.15 Aligned_cols=110 Identities=13% Similarity=0.133 Sum_probs=76.3
Q ss_pred CCceEEeecch---hhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHH
Q 013836 308 GRGYIVKWAPQ---QQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEI 384 (435)
Q Consensus 308 ~~~~~~~~~p~---~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l 384 (435)
+++.+.+++++ .++++.+++ ||+.+| |++.||+++|+|+|+.+...+... +.+. |.|+.++. ++++|
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~--d~~~l 332 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT--DKQRI 332 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS--SHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC--CHHHH
Confidence 58888766664 467889999 999985 448899999999999997544433 3453 88888865 89999
Q ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 385 ERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 385 ~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
.++|.++++| ++.+++..+-+.++. ...+..+.++.+.+.+++
T Consensus 333 a~~i~~ll~d---~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~ 375 (384)
T 1vgv_A 333 VEEVTRLLKD---ENEYQAMSRAHNPYG----DGQACSRILEALKNNRIS 375 (384)
T ss_dssp HHHHHHHHHC---HHHHHHHHSSCCTTC----CSCHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHhC---hHHHhhhhhccCCCc----CCCHHHHHHHHHHHHHHh
Confidence 9999999998 554443322222221 345555556666555443
No 34
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.94 E-value=4.7e-09 Score=100.51 Aligned_cols=108 Identities=10% Similarity=0.074 Sum_probs=76.1
Q ss_pred CCceEEeecch---hhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHH
Q 013836 308 GRGYIVKWAPQ---QQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEI 384 (435)
Q Consensus 308 ~~~~~~~~~p~---~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l 384 (435)
+++.+.+++++ .++++.+++ ||+.+| |.+.||+++|+|+|+.+...++... .+. |.|+.+. .++++|
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~--~d~~~l 324 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG--TDPEGV 324 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC--SCHHHH
T ss_pred CCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC--CCHHHH
Confidence 58888855554 488999999 999884 4466999999999999876666652 353 8887775 489999
Q ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 013836 385 ERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHI 432 (435)
Q Consensus 385 ~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 432 (435)
.++|.++++| ++.+++..+.+..+ ..++++.+.++.+.+.+
T Consensus 325 a~~i~~ll~d---~~~~~~~~~~~~~~----~~~~~~~~i~~~i~~~~ 365 (376)
T 1v4v_A 325 YRVVKGLLEN---PEELSRMRKAKNPY----GDGKAGLMVARGVAWRL 365 (376)
T ss_dssp HHHHHHHHTC---HHHHHHHHHSCCSS----CCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhC---hHhhhhhcccCCCC----CCChHHHHHHHHHHHHh
Confidence 9999999998 65554444322222 24455556566555543
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.91 E-value=3.3e-09 Score=101.47 Aligned_cols=109 Identities=15% Similarity=0.122 Sum_probs=74.8
Q ss_pred CCceEEeecchh---hhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHH
Q 013836 308 GRGYIVKWAPQQ---QVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEI 384 (435)
Q Consensus 308 ~~~~~~~~~p~~---~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l 384 (435)
+++.+.+++++. .+++.+++ +|+..| +.+.||+++|+|+|+.......+. +.+. |.|+.++. ++++|
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e----~v~~-g~g~~v~~--d~~~l 332 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPE----GIEA-GTLKLAGT--DEETI 332 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHH----HHHT-TSEEECCS--CHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCce----eecC-CceEEcCC--CHHHH
Confidence 688887777654 67889999 998864 458899999999999864333322 3453 88887763 89999
Q ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 385 ERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 385 ~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
.++|.++++| ++.+++..+-+.++. +..+..+.++.+.+.++
T Consensus 333 a~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 333 FSLADELLSD---KEAHDKMSKASNPYG----DGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHC---HHHHHHHCCCCCTTC----CSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC---hHhHhhhhhcCCCCC----CCcHHHHHHHHHHHHhh
Confidence 9999999998 655544322222221 34555666666665543
No 36
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.90 E-value=7.9e-09 Score=99.74 Aligned_cols=105 Identities=10% Similarity=0.068 Sum_probs=72.4
Q ss_pred cCCceEEeecc---hhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHH
Q 013836 307 DGRGYIVKWAP---QQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKE 383 (435)
Q Consensus 307 ~~~~~~~~~~p---~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~ 383 (435)
.+++.+.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|+..-..+++. +.+. |.++.+. .++++
T Consensus 287 ~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~--~d~~~ 356 (396)
T 3dzc_A 287 VSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVG--TNQQQ 356 (396)
T ss_dssp CTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECT--TCHHH
T ss_pred CCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcC--CCHHH
Confidence 35788877765 3478889999 999987 666799999999999865555432 3453 8776554 37999
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 013836 384 IERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRL 428 (435)
Q Consensus 384 l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 428 (435)
|.+++.++++| ++.+++..+.+..+. .|+++.+.++.+
T Consensus 357 l~~ai~~ll~d---~~~~~~m~~~~~~~~----~~~aa~ri~~~l 394 (396)
T 3dzc_A 357 ICDALSLLLTD---PQAYQAMSQAHNPYG----DGKACQRIADIL 394 (396)
T ss_dssp HHHHHHHHHHC---HHHHHHHHTSCCTTC----CSCHHHHHHHHH
T ss_pred HHHHHHHHHcC---HHHHHHHhhccCCCc----CChHHHHHHHHH
Confidence 99999999999 666554444333332 445544444433
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.89 E-value=6.2e-09 Score=98.32 Aligned_cols=81 Identities=12% Similarity=0.047 Sum_probs=60.5
Q ss_pred hhhcCCceEEeecchh---hhhcCCccceEee-------------ccC-ccchHHHHhhCCCeeeccCCCchhHHHHHHH
Q 013836 304 EMVDGRGYIVKWAPQQ---QVLAHPAVGCFWT-------------HSG-WNSTLESICEGIPMICQPYFGDQMVNSRYVS 366 (435)
Q Consensus 304 ~~~~~~~~~~~~~p~~---~ll~~~~v~~~I~-------------HGG-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~ 366 (435)
...++|+.+.+|+++. +++..+++ +|. +-| -+++.||+++|+|+|+.... .....+.
T Consensus 208 ~~~~~~v~~~g~~~~~~l~~~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~ 281 (342)
T 2iuy_A 208 RRYGSTVEPIGEVGGERRLDLLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVP 281 (342)
T ss_dssp HHHTTTEEECCCCCHHHHHHHHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGG
T ss_pred HHhCCCEEEeccCCHHHHHHHHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhc
Confidence 3445899999999976 67888998 773 233 35799999999999998763 3445555
Q ss_pred h--hhccEEEeCCcCCHHHHHHHHHHHHc
Q 013836 367 H--AWRVGLQLEGKLERKEIERAILRVMV 393 (435)
Q Consensus 367 ~--~~G~g~~~~~~~~~~~l~~~i~~vl~ 393 (435)
+ . +.|+.++. +.+++.++|.++++
T Consensus 282 ~~~~-~~g~~~~~--d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 282 SVGE-VVGYGTDF--APDEARRTLAGLPA 307 (342)
T ss_dssp GGEE-ECCSSSCC--CHHHHHHHHHTSCC
T ss_pred ccCC-CceEEcCC--CHHHHHHHHHHHHH
Confidence 5 3 45655553 99999999999887
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.87 E-value=1e-07 Score=92.43 Aligned_cols=112 Identities=15% Similarity=0.113 Sum_probs=76.9
Q ss_pred cCCceEEeecc---hh---hhhcCCccceEeecc----CccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeC
Q 013836 307 DGRGYIVKWAP---QQ---QVLAHPAVGCFWTHS----GWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLE 376 (435)
Q Consensus 307 ~~~~~~~~~~p---~~---~ll~~~~v~~~I~HG----G~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 376 (435)
.++|.+.+|++ +. +++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+.+. +.|...+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 47899999876 22 67888888 77543 45689999999999999764 4455666663 6788776
Q ss_pred CcCCHHHHHHHHHHHHcCCchHHHHHHHHH-HHHHHHHHHhcCCChHHHHHHHHHHHHcC
Q 013836 377 GKLERKEIERAILRVMVKADSQEMRERATY-LNEKVDICLQQGGSSYQSLGRLTDHIMSL 435 (435)
Q Consensus 377 ~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~-l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 435 (435)
+.++|.++|.++++| ++.+++..+ .++.+. +.-+....++.+++.++++
T Consensus 365 ---d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~----~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKH---PEVSKEMGAKAKERVR----KNFIITKHMERYLDILNSL 414 (416)
T ss_dssp ---SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HHTBHHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHH----HHcCHHHHHHHHHHHHHHh
Confidence 889999999999998 554333222 222222 2234566677777766653
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.61 E-value=1.7e-06 Score=90.13 Aligned_cols=81 Identities=9% Similarity=0.167 Sum_probs=58.0
Q ss_pred cCCceEEe----ecchhhhhc----CCccceEeec----cCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEE
Q 013836 307 DGRGYIVK----WAPQQQVLA----HPAVGCFWTH----SGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQ 374 (435)
Q Consensus 307 ~~~~~~~~----~~p~~~ll~----~~~v~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~ 374 (435)
.++|.+.+ ++|+.++.. .+++ ||.= |--.++.||+++|+|+|+.. -......+.+. +.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccC-CcEEE
Confidence 46888887 445555544 4567 7732 44458999999999999964 34455566663 68888
Q ss_pred eCCcCCHHHHHHHHHHHH----cCC
Q 013836 375 LEGKLERKEIERAILRVM----VKA 395 (435)
Q Consensus 375 ~~~~~~~~~l~~~i~~vl----~~~ 395 (435)
++. -+.++++++|.+++ .|.
T Consensus 712 v~p-~D~e~LA~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 712 IDP-YHGDQAADTLADFFTKCKEDP 735 (816)
T ss_dssp ECT-TSHHHHHHHHHHHHHHHHHCT
T ss_pred eCC-CCHHHHHHHHHHHHHHhccCH
Confidence 886 78999999997776 673
No 40
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.32 E-value=1.8e-05 Score=76.31 Aligned_cols=109 Identities=11% Similarity=0.013 Sum_probs=69.5
Q ss_pred ceEEeecchh---hhhcCCccceEee----ccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhcc-----------
Q 013836 310 GYIVKWAPQQ---QVLAHPAVGCFWT----HSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRV----------- 371 (435)
Q Consensus 310 ~~~~~~~p~~---~ll~~~~v~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~----------- 371 (435)
+.+.+|+|+. +++..+++ +|. -|.-.++.||+++|+|+|+... ......+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHcc--Ccccccccccccc
Confidence 5556999855 56778888 773 3344589999999999999654 333444444 22
Q ss_pred -----EE--EeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 372 -----GL--QLEGKLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 372 -----g~--~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
|+ .+.. -+.++|.++| ++++| ++.+++..+-+.+.. .+.=+....++.+++.+++
T Consensus 328 ~~~~~G~~gl~~~-~d~~~la~~i-~l~~~---~~~~~~~~~~a~~~~---~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-IDVDDLVEAF-TFFKD---EKNRKEYGKRVQDFV---KTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp CTTTCSSCCEEEE-CCHHHHHHHH-HHTTS---HHHHHHHHHHHHHHH---TTSCCHHHHHHHHHHHHHH
T ss_pred cccccCcceeeCC-CCHHHHHHHH-HHhcC---HHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHH
Confidence 44 4443 5899999999 99998 555443332222221 1344566666666666554
No 41
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.24 E-value=8.3e-05 Score=71.73 Aligned_cols=76 Identities=11% Similarity=0.015 Sum_probs=59.5
Q ss_pred hcCCceEEeecchh---hhhcCCccceEee---ccCc-cchHHHH-------hhCCCeeeccCCCchhHHHHHHHhhhcc
Q 013836 306 VDGRGYIVKWAPQQ---QVLAHPAVGCFWT---HSGW-NSTLESI-------CEGIPMICQPYFGDQMVNSRYVSHAWRV 371 (435)
Q Consensus 306 ~~~~~~~~~~~p~~---~ll~~~~v~~~I~---HGG~-gs~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 371 (435)
+.+||.+.+++|++ +++..+++ +|. +.|. +++.||+ ++|+|+|+... +.+. ..
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~ 329 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YK 329 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cc
Confidence 35788899999865 56788998 764 3344 5688999 99999999866 5553 56
Q ss_pred EEE-eCCcCCHHHHHHHHHHHHcCC
Q 013836 372 GLQ-LEGKLERKEIERAILRVMVKA 395 (435)
Q Consensus 372 g~~-~~~~~~~~~l~~~i~~vl~~~ 395 (435)
|.. ++. -+.++|+++|.++++|+
T Consensus 330 G~l~v~~-~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 330 SRFGYTP-GNADSVIAAITQALEAP 353 (406)
T ss_dssp SEEEECT-TCHHHHHHHHHHHHHCC
T ss_pred eEEEeCC-CCHHHHHHHHHHHHhCc
Confidence 777 665 78999999999999873
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.24 E-value=4.3e-05 Score=75.47 Aligned_cols=110 Identities=14% Similarity=0.020 Sum_probs=71.1
Q ss_pred hcCCce-EEeecchh---hhhcCCccceEee----ccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhh--------
Q 013836 306 VDGRGY-IVKWAPQQ---QVLAHPAVGCFWT----HSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAW-------- 369 (435)
Q Consensus 306 ~~~~~~-~~~~~p~~---~ll~~~~v~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~-------- 369 (435)
.++++. +.++ +.+ +++..+++ +|. -|.-.++.||+++|+|+|+... ......+.+ -
T Consensus 344 ~~~~v~~~~g~-~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~ 415 (485)
T 1rzu_A 344 HHGRVGVAIGY-NEPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASK 415 (485)
T ss_dssp TTTTEEEEESC-CHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTT
T ss_pred CCCcEEEecCC-CHHHHHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-ccccccccc
Confidence 356887 5677 443 57888998 773 3445689999999999999765 334444444 2
Q ss_pred -ccEEEeCCcCCHHHHHHHHHHHH---cCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 370 -RVGLQLEGKLERKEIERAILRVM---VKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 370 -G~g~~~~~~~~~~~l~~~i~~vl---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
+.|+.++. -+.++|+++|.+++ +| ++.+++..+- .. ++.-+-...++++++..+
T Consensus 416 ~~~G~l~~~-~d~~~la~~i~~ll~~~~~---~~~~~~~~~~---~~---~~~fs~~~~~~~~~~~y~ 473 (485)
T 1rzu_A 416 AATGVQFSP-VTLDGLKQAIRRTVRYYHD---PKLWTQMQKL---GM---KSDVSWEKSAGLYAALYS 473 (485)
T ss_dssp CCCBEEESS-CSHHHHHHHHHHHHHHHTC---HHHHHHHHHH---HH---TCCCBHHHHHHHHHHHHH
T ss_pred CCcceEeCC-CCHHHHHHHHHHHHHHhCC---HHHHHHHHHH---HH---HHhCChHHHHHHHHHHHH
Confidence 47787775 78999999999999 67 5544332221 11 134444555555555443
No 43
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.04 E-value=7.8e-06 Score=69.08 Aligned_cols=93 Identities=11% Similarity=0.149 Sum_probs=70.4
Q ss_pred hcCCceEEeecchh---hhhcCCccceEee---ccCcc-chHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCc
Q 013836 306 VDGRGYIVKWAPQQ---QVLAHPAVGCFWT---HSGWN-STLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGK 378 (435)
Q Consensus 306 ~~~~~~~~~~~p~~---~ll~~~~v~~~I~---HGG~g-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~ 378 (435)
+.+|+.+.+|+++. +++..+++ +|. +.|.| ++.||+++|+|+|+... ..+...+.+. +.|+.+ .
T Consensus 76 l~~~v~~~g~~~~~e~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~- 146 (177)
T 2f9f_A 76 APDNVKFLGSVSEEELIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N- 146 (177)
T ss_dssp SCTTEEEEESCCHHHHHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-
Confidence 45799999999973 67888998 776 34555 99999999999999754 4556666663 788888 4
Q ss_pred CCHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 013836 379 LERKEIERAILRVMVKADSQEMRERATYLNE 409 (435)
Q Consensus 379 ~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~ 409 (435)
-+.+++.++|.++++|. +.+++++++.++
T Consensus 147 ~d~~~l~~~i~~l~~~~--~~~~~~~~~~a~ 175 (177)
T 2f9f_A 147 ADVNEIIDAMKKVSKNP--DKFKKDCFRRAK 175 (177)
T ss_dssp SCHHHHHHHHHHHHHCT--TTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCH--HHHHHHHHHHHh
Confidence 78999999999999884 222555554443
No 44
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.31 E-value=0.00051 Score=56.78 Aligned_cols=94 Identities=15% Similarity=0.190 Sum_probs=60.2
Q ss_pred hcCCceEEeecchh---hhhcCCccceEee----ccCccchHHHHhhCC-CeeeccCCCchhHHHHHHHhhhccEEEeCC
Q 013836 306 VDGRGYIVKWAPQQ---QVLAHPAVGCFWT----HSGWNSTLESICEGI-PMICQPYFGDQMVNSRYVSHAWRVGLQLEG 377 (435)
Q Consensus 306 ~~~~~~~~~~~p~~---~ll~~~~v~~~I~----HGG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 377 (435)
.+.++.+ +|+|+. +++..+++ +|. -|.-.++.||+++|+ |+|+......- ...+.+. +. .+..
T Consensus 54 ~~~~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~---~~~~~~~-~~--~~~~ 124 (166)
T 3qhp_A 54 LGVKAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSAT---RQFALDE-RS--LFEP 124 (166)
T ss_dssp HTCEEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGG---GGGCSSG-GG--EECT
T ss_pred cCCeEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCch---hhhccCC-ce--EEcC
Confidence 3457777 999865 57788888 775 344459999999996 99994322211 1122231 33 3333
Q ss_pred cCCHHHHHHHHHHHHcCCc-hHHHHHHHHHHHH
Q 013836 378 KLERKEIERAILRVMVKAD-SQEMRERATYLNE 409 (435)
Q Consensus 378 ~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~ 409 (435)
-+.+++.++|.++++|.+ ...+.+++++..+
T Consensus 125 -~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 125 -NNAKDLSAKIDWWLENKLERERMQNEYAKSAL 156 (166)
T ss_dssp -TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 689999999999999832 2334444444443
No 45
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.27 E-value=0.00071 Score=57.82 Aligned_cols=77 Identities=14% Similarity=0.163 Sum_probs=60.3
Q ss_pred CceE-Eeecchh---hhhcCCccceEeecc---C-ccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCC
Q 013836 309 RGYI-VKWAPQQ---QVLAHPAVGCFWTHS---G-WNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLE 380 (435)
Q Consensus 309 ~~~~-~~~~p~~---~ll~~~~v~~~I~HG---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~ 380 (435)
++.+ .+++++. +++..+++ +|.-. | -.++.||+++|+|+|+... ......+ +. +.|..++. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-CC
Confidence 8988 8999854 67888888 77432 3 4578999999999998754 3444555 53 78888876 78
Q ss_pred HHHHHHHHHHHHc-C
Q 013836 381 RKEIERAILRVMV-K 394 (435)
Q Consensus 381 ~~~l~~~i~~vl~-~ 394 (435)
.+++.++|.++++ |
T Consensus 167 ~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 167 PGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcC
Confidence 9999999999999 8
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.25 E-value=0.00081 Score=63.94 Aligned_cols=97 Identities=14% Similarity=0.229 Sum_probs=71.9
Q ss_pred CceEEeecch-hhhhcCCccceEeec-----cCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHH
Q 013836 309 RGYIVKWAPQ-QQVLAHPAVGCFWTH-----SGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERK 382 (435)
Q Consensus 309 ~~~~~~~~p~-~~ll~~~~v~~~I~H-----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~ 382 (435)
++++.++..+ ..+++.+++ ++.- +|..++.||+++|+|+|+-|...+.+.....+.+. |.++... +.+
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~---d~~ 334 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK---NET 334 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC---SHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC---CHH
Confidence 4555554433 368888887 6642 24478999999999999888777777776666563 8777653 678
Q ss_pred HHHHHHHHHHcCCc-hHHHHHHHHHHHHHHH
Q 013836 383 EIERAILRVMVKAD-SQEMRERATYLNEKVD 412 (435)
Q Consensus 383 ~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~ 412 (435)
+|.++|.++++| + ...|.+++++..++-.
T Consensus 335 ~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 335 ELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 999999999988 5 6788888887766544
No 47
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.20 E-value=0.00066 Score=63.47 Aligned_cols=109 Identities=17% Similarity=0.225 Sum_probs=79.2
Q ss_pred CceEEeecchhhhh---cCCccceEeeccCc---------cchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeC
Q 013836 309 RGYIVKWAPQQQVL---AHPAVGCFWTHSGW---------NSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLE 376 (435)
Q Consensus 309 ~~~~~~~~p~~~ll---~~~~v~~~I~HGG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 376 (435)
||.+.+|+|..++. ..++++.+..-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|+..+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 89999999998654 44555444433322 24789999999999855 45677788885 9999987
Q ss_pred CcCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013836 377 GKLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTD 430 (435)
Q Consensus 377 ~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 430 (435)
. .+++.+++..+..+ +..+|++++++.++++. .|--..+++.+.+.
T Consensus 290 ~---~~e~~~~i~~l~~~-~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~ 335 (339)
T 3rhz_A 290 D---VEEAIMKVKNVNED-EYIELVKNVRSFNPILR----KGFFTRRLLTESVF 335 (339)
T ss_dssp S---HHHHHHHHHHCCHH-HHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHH
Confidence 3 67888888876433 45789999999999988 56555555555443
No 48
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.20 E-value=0.0014 Score=66.01 Aligned_cols=116 Identities=7% Similarity=-0.027 Sum_probs=74.2
Q ss_pred CCceEEeecchh---hhhcCCccceEe---eccCccchHHHHhhCCCeeeccCCCchhHH-HHHHHhhhccEEEeCCcCC
Q 013836 308 GRGYIVKWAPQQ---QVLAHPAVGCFW---THSGWNSTLESICEGIPMICQPYFGDQMVN-SRYVSHAWRVGLQLEGKLE 380 (435)
Q Consensus 308 ~~~~~~~~~p~~---~ll~~~~v~~~I---~HGG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~~v~~~~G~g~~~~~~~~ 380 (435)
++|.+.+++|+. +++..+++ || ..|+-+++.||+++|+|+|++|-..=.-.. +..+.. .|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 788899999854 56788888 76 236677899999999999998753211112 344555 466544443 8
Q ss_pred HHHHHHHHHHHHcCCchHHHHHHHHHH-HHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 381 RKEIERAILRVMVKADSQEMRERATYL-NEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 381 ~~~l~~~i~~vl~~~~~~~~~~~a~~l-~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
.+++.+++.++++| ++.+++..+- ++.+.. .+.-+....++.+++..+
T Consensus 509 ~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~~--~~~f~~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 509 DAAFVAKAVALASD---PAALTALHARVDVLRRA--SGVFHMDGFADDFGALLQ 557 (568)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHH--SSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---HHHHHHHHHHHHHhhhc--CCCCCHHHHHHHHHHHHH
Confidence 99999999999998 5544433222 222200 133455555566555544
No 49
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.02 E-value=0.00021 Score=68.23 Aligned_cols=108 Identities=10% Similarity=0.031 Sum_probs=74.3
Q ss_pred CCceEEeec---chhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHH
Q 013836 308 GRGYIVKWA---PQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEI 384 (435)
Q Consensus 308 ~~~~~~~~~---p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l 384 (435)
+|+++.+.+ ....+++++++ +|+-.|. .+.||.++|+|+|+++-..+.+. ..+. |.++.+. .++++|
T Consensus 263 ~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~--~d~~~i 332 (385)
T 4hwg_A 263 DKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG--FKAERV 332 (385)
T ss_dssp GGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC--SSHHHH
T ss_pred CCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC--CCHHHH
Confidence 467776544 44578899999 9999875 46899999999999987655222 2453 8776654 489999
Q ss_pred HHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 013836 385 ERAILRVMVKAD-SQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHI 432 (435)
Q Consensus 385 ~~~i~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 432 (435)
.+++.++|+|+. ...+++++. .+- +.|+++.+.++.+.+.+
T Consensus 333 ~~ai~~ll~d~~~~~~m~~~~~----~~~---g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 333 LQAVKTITEEHDNNKRTQGLVP----DYN---EAGLVSKKILRIVLSYV 374 (385)
T ss_dssp HHHHHHHHTTCBTTBCCSCCCH----HHH---TCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhChHHHHHhhccCC----CCC---CCChHHHHHHHHHHHHh
Confidence 999999999842 112222222 230 37788888777776654
No 50
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.06 E-value=0.036 Score=54.26 Aligned_cols=111 Identities=12% Similarity=0.004 Sum_probs=71.9
Q ss_pred hcCCce-EEeecchh--hhhcCCccceEee----ccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhh---------
Q 013836 306 VDGRGY-IVKWAPQQ--QVLAHPAVGCFWT----HSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAW--------- 369 (435)
Q Consensus 306 ~~~~~~-~~~~~p~~--~ll~~~~v~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~--------- 369 (435)
.++++. +.++.... +++..+++ +|. -|.-.++.||+++|+|+|+... ......+.+ -
T Consensus 345 ~~~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~ 417 (485)
T 2qzs_A 345 YPGQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGV 417 (485)
T ss_dssp STTTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTC
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-Cccccccccc
Confidence 346786 56773332 67888998 773 2444578899999999999854 334444444 2
Q ss_pred ccEEEeCCcCCHHHHHHHHHHHH---cCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 370 RVGLQLEGKLERKEIERAILRVM---VKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 370 G~g~~~~~~~~~~~l~~~i~~vl---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
+.|..++. -+.++|+++|.+++ +| ++.+++..+-+ .+ +.-+-...++.+++..+
T Consensus 418 ~~G~l~~~-~d~~~la~~i~~ll~~~~~---~~~~~~~~~~~---~~---~~fs~~~~~~~~~~ly~ 474 (485)
T 2qzs_A 418 ASGFVFED-SNAWSLLRAIRRAFVLWSR---PSLWRFVQRQA---MA---MDFSWQVAAKSYRELYY 474 (485)
T ss_dssp CCBEEECS-SSHHHHHHHHHHHHHHHTS---HHHHHHHHHHH---HH---CCCCHHHHHHHHHHHHH
T ss_pred cceEEECC-CCHHHHHHHHHHHHHHcCC---HHHHHHHHHHH---Hh---hcCCHHHHHHHHHHHHH
Confidence 47887776 78999999999999 67 55443332221 11 44555566666665554
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=95.79 E-value=0.054 Score=55.93 Aligned_cols=117 Identities=14% Similarity=0.104 Sum_probs=71.2
Q ss_pred cCCceEEeecchhhhh---cCCccceEee---ccCccchHHHHhhCCCeeeccCCC-chhHHHHHHHhhhccEEEeCCcC
Q 013836 307 DGRGYIVKWAPQQQVL---AHPAVGCFWT---HSGWNSTLESICEGIPMICQPYFG-DQMVNSRYVSHAWRVGLQLEGKL 379 (435)
Q Consensus 307 ~~~~~~~~~~p~~~ll---~~~~v~~~I~---HGG~gs~~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~g~~~~~~~ 379 (435)
.+++.+.+..|..+.| ..+++ +.- .+|..|+.|||+.|||+|.++-.. =...-+..+.. +|+.-.+. -
T Consensus 579 ~~r~~f~~~~~~~~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia--~ 653 (723)
T 4gyw_A 579 QNRIIFSPVAPKEEHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA--K 653 (723)
T ss_dssp GGGEEEEECCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC--S
T ss_pred cCeEEECCCCCHHHHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc--C
Confidence 3678888888876544 45776 754 899999999999999999999422 22333455555 57654443 4
Q ss_pred CHHHHHHHHHHHHcCCchHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 380 ERKEIERAILRVMVKADSQEMRERAT-YLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 380 ~~~~l~~~i~~vl~~~~~~~~~~~a~-~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
|.++-.+.-.++-+| ++..+..+ ++++.+... .---....++.|++..+
T Consensus 654 ~~~~Y~~~a~~la~d---~~~l~~lr~~l~~~~~~s--~l~d~~~~~~~le~a~~ 703 (723)
T 4gyw_A 654 NRQEYEDIAVKLGTD---LEYLKKVRGKVWKQRISS--PLFNTKQYTMELERLYL 703 (723)
T ss_dssp SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHS--STTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHhC--cCcCHHHHHHHHHHHHH
Confidence 555555555566666 45444332 344443321 12334555666665544
No 52
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.82 E-value=0.012 Score=56.60 Aligned_cols=85 Identities=13% Similarity=0.084 Sum_probs=59.0
Q ss_pred cCCceEEeecchh---hhhcCCccceEeec---cCc-cchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcC
Q 013836 307 DGRGYIVKWAPQQ---QVLAHPAVGCFWTH---SGW-NSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKL 379 (435)
Q Consensus 307 ~~~~~~~~~~p~~---~ll~~~~v~~~I~H---GG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~ 379 (435)
.+++.+.+++|+. +++..+++ ||.- =|. .++.||+++|+|+|+ -..+ ....+.+. ..|+.++. -
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~ 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-L 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-C
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-C
Confidence 3578888999876 56778998 7742 244 467999999999998 3222 11234442 57887876 7
Q ss_pred CHHHHHHHHHHHHcCCchHHHHHH
Q 013836 380 ERKEIERAILRVMVKADSQEMRER 403 (435)
Q Consensus 380 ~~~~l~~~i~~vl~~~~~~~~~~~ 403 (435)
++++|+++|.++++| ++.+++
T Consensus 365 d~~~la~ai~~ll~~---~~~~~~ 385 (413)
T 2x0d_A 365 NPENIAETLVELCMS---FNNRDV 385 (413)
T ss_dssp SHHHHHHHHHHHHHH---TC----
T ss_pred CHHHHHHHHHHHHcC---HHHHHH
Confidence 899999999999998 455444
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=94.27 E-value=0.08 Score=52.89 Aligned_cols=91 Identities=10% Similarity=0.105 Sum_probs=61.5
Q ss_pred hcCCceEEeecchhhhh---cCCccceEee---ccCccchHHHHhhCCCeeeccCCCch-hHHHHHHHhhhccEEE-eCC
Q 013836 306 VDGRGYIVKWAPQQQVL---AHPAVGCFWT---HSGWNSTLESICEGIPMICQPYFGDQ-MVNSRYVSHAWRVGLQ-LEG 377 (435)
Q Consensus 306 ~~~~~~~~~~~p~~~ll---~~~~v~~~I~---HGG~gs~~eal~~GvP~v~~P~~~DQ-~~na~~v~~~~G~g~~-~~~ 377 (435)
+.+++.+.+.+|..+.+ ..+++ |+. .+|..|+.||+++|||+|+.+-..=. ..-+..+.. .|+.-. +.
T Consensus 497 I~~Rv~F~g~~p~~e~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA- 572 (631)
T 3q3e_A 497 LGDSATAHPHSPYHQYLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA- 572 (631)
T ss_dssp HGGGEEEECCCCHHHHHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE-
T ss_pred CCccEEEcCCCCHHHHHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec-
Confidence 34688888988877554 67887 543 37889999999999999998854322 222233444 465432 22
Q ss_pred cCCHHHHHHHHHHHHcCCchHHHHHHH
Q 013836 378 KLERKEIERAILRVMVKADSQEMRERA 404 (435)
Q Consensus 378 ~~~~~~l~~~i~~vl~~~~~~~~~~~a 404 (435)
-+.++..+...++.+| ++.+++.
T Consensus 573 -~d~eeYv~~Av~La~D---~~~l~~L 595 (631)
T 3q3e_A 573 -NTVDEYVERAVRLAEN---HQERLEL 595 (631)
T ss_dssp -SSHHHHHHHHHHHHHC---HHHHHHH
T ss_pred -CCHHHHHHHHHHHhCC---HHHHHHH
Confidence 4688888888899988 5554443
No 54
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=92.88 E-value=0.5 Score=43.97 Aligned_cols=107 Identities=9% Similarity=-0.012 Sum_probs=75.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCce-EEEccCCCCCCCCCCCCCCCCHH
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPNSCNYPHFE-FCSFSDDGFSETYQPSKVADDIP 87 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 87 (435)
+.+.+||+++-..+.|++.-..++.+.|.++ +.+|++++.+...+.....++++ ++.++ .. ...
T Consensus 5 ~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~-~~------------~~~ 71 (349)
T 3tov_A 5 ELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVD-KK------------GRH 71 (349)
T ss_dssp CCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEEC-CS------------SHH
T ss_pred CCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeC-cc------------ccc
Confidence 5678999999998889999999999999998 99999999976555555556664 55555 10 111
Q ss_pred HHHHHHHHhcchHHHHHHHHHHhccCCcCCCCc-cEEEEcCchhhHHHHHHHcCCCeEE
Q 013836 88 ALLLSLNAKCIVPFRDCLANKLMSNAQESKDSF-ACLITDAAWFIALSVANDFKLPTIV 145 (435)
Q Consensus 88 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-Dlvi~D~~~~~~~~~A~~~giP~v~ 145 (435)
..+. .+..++.++.+ .++ |++|.=.-..-...++...|+|..+
T Consensus 72 ~~~~--------~~~~l~~~Lr~-------~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 72 NSIS--------GLNEVAREINA-------KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHHH--------HHHHHHHHHHH-------HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ccHH--------HHHHHHHHHhh-------CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1111 12234566665 579 9999654445566788889999754
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=91.23 E-value=0.41 Score=44.31 Aligned_cols=103 Identities=13% Similarity=0.042 Sum_probs=64.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCc-eEEEccCCCCCCCCCCCCCCCCHHHHHH
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPNSCNYPHF-EFCSFSDDGFSETYQPSKVADDIPALLL 91 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
|||+++.....|++.-..++.+.|.++ +.+|++++.+...+.....+.+ +++.++ . ... ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~-~--~~~------~~~------ 65 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMP-L--GHG------ALE------ 65 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC----------------C------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEec-C--Ccc------ccc------
Confidence 789999987779999999999999997 9999999996433322333444 333333 1 000 000
Q ss_pred HHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEE
Q 013836 92 SLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIV 145 (435)
Q Consensus 92 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~ 145 (435)
...+..+.+.+.+ .+||++|.=.-...+..++...|+|..+
T Consensus 66 ------~~~~~~l~~~l~~-------~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 66 ------IGERRKLGHSLRE-------KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ------HHHHHHHHHHTTT-------TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ------hHHHHHHHHHHHh-------cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0122344555654 6899999322234556778888999743
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=90.54 E-value=0.17 Score=50.32 Aligned_cols=82 Identities=15% Similarity=0.153 Sum_probs=55.6
Q ss_pred hhcCCceEEeecchh---hhhcCCccceEeec---cCcc-chHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCC
Q 013836 305 MVDGRGYIVKWAPQQ---QVLAHPAVGCFWTH---SGWN-STLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEG 377 (435)
Q Consensus 305 ~~~~~~~~~~~~p~~---~ll~~~~v~~~I~H---GG~g-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 377 (435)
..++++.+..+.+.. .+++.+++ ||.= =|.| +++||+++|+|+|+... .-....|.+. .-|.....
T Consensus 379 ~~~~~v~~~~~~~~~~~~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~ 451 (536)
T 3vue_A 379 KYPGKVRAVVKFNAPLAHLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGR 451 (536)
T ss_dssp HSTTTEEEECSCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCC
T ss_pred hcCCceEEEEeccHHHHHHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCcccccc
Confidence 356788887776654 46788888 7742 2444 88999999999998654 3344455553 45553321
Q ss_pred ---------cCCHHHHHHHHHHHHc
Q 013836 378 ---------KLERKEIERAILRVMV 393 (435)
Q Consensus 378 ---------~~~~~~l~~~i~~vl~ 393 (435)
..+++.|.++|+++++
T Consensus 452 ~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 452 LSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp CCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCceeEECCCCHHHHHHHHHHHHH
Confidence 2467899999998875
No 57
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=89.24 E-value=6.5 Score=34.31 Aligned_cols=38 Identities=16% Similarity=0.059 Sum_probs=28.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNS 54 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~ 54 (435)
||||+.--=+. |--=+..|+++|.+.| +|+++.|..+.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~ 39 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCc
Confidence 88888775443 3334778899999888 99999997544
No 58
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=88.69 E-value=2.8 Score=40.83 Aligned_cols=108 Identities=12% Similarity=0.108 Sum_probs=66.8
Q ss_pred ceE-Eeecchhh---hhcCCccceEee---ccCcc-chHHHHhhCC-----CeeeccCCCchhHHHHHHHhhhccEEEeC
Q 013836 310 GYI-VKWAPQQQ---VLAHPAVGCFWT---HSGWN-STLESICEGI-----PMICQPYFGDQMVNSRYVSHAWRVGLQLE 376 (435)
Q Consensus 310 ~~~-~~~~p~~~---ll~~~~v~~~I~---HGG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 376 (435)
+.+ .+++++.+ ++..++| ||. .=|+| +..||+++|+ |+|+--..+--.. +.-|+.+.
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~--------l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE--------LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT--------CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH--------hCCeEEEC
Confidence 443 47888774 5667888 664 44666 7899999998 6665443221111 12355666
Q ss_pred CcCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 013836 377 GKLERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIMS 434 (435)
Q Consensus 377 ~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 434 (435)
. .+.++++++|.++|++.. ++-+++.++..+.+. + -+.....+.+++.+++
T Consensus 403 p-~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 403 P-YDRDEVAAALDRALTMSL-AERISRHAEMLDVIV----K-NDINHWQECFISDLKQ 453 (482)
T ss_dssp T-TCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHh
Confidence 5 789999999999998521 223444444444444 2 2456666666666553
No 59
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=87.38 E-value=0.28 Score=46.94 Aligned_cols=39 Identities=28% Similarity=0.373 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCCc-----cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQ-----GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~-----GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++|||++++.... |=......|+++|+++||+|+++++.
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 4799998885422 33356889999999999999999985
No 60
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=86.63 E-value=2.7 Score=41.55 Aligned_cols=39 Identities=13% Similarity=0.166 Sum_probs=29.6
Q ss_pred CCCCEEEEEcC--------CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 12 RNGRRVILFPL--------PFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 12 ~~~~~il~~~~--------~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
.++|||+++++ |+-|+ ..-+|.++|+++||+|++++|..
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLad--vv~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGD--VLGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHH--HHHHHHHHHHTTTCEEEEEEECC
T ss_pred CCCcEEEEEEEeccchhccCcHHH--HHHHHHHHHHHcCCeEEEEecCc
Confidence 36899999963 22233 35688999999999999999854
No 61
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=85.02 E-value=0.74 Score=44.68 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=29.7
Q ss_pred CEEEEEcCC------CccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLP------FQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~------~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||++++.. ..|=-.-...|+++|.++||+|+++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPA 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 789998752 2344566788999999999999999974
No 62
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=83.73 E-value=14 Score=32.09 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCCCCC
Q 013836 15 RRVILFPLPFQGHINP-MLQLGSILYSEGFSITIIHTTLNS 54 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p-~l~La~~L~~rGH~Vt~~~~~~~~ 54 (435)
||||+.--=+. .-| +..|+++|.+.| +|+++.|..+.
T Consensus 1 M~ILlTNDDGi--~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (247)
T 1j9j_A 1 MRILVTNDDGI--QSKGIIVLAELLSEEH-EVFVVAPDKER 38 (247)
T ss_dssp CEEEEECSSCT--TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCCCC--CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 56666654333 334 778899998888 89999997553
No 63
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=81.63 E-value=2.1 Score=33.66 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=36.6
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|++.+|++.+.++.+|-....=++..|..+|++|+.+...
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 5678999999999999999999999999999999988873
No 64
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=81.58 E-value=12 Score=36.35 Aligned_cols=109 Identities=12% Similarity=0.029 Sum_probs=67.7
Q ss_pred CceEEeecchhh---hhcCCccceEee---ccCccc-hHHHHhhC---CCeeeccCCCchhHHHHHHHhhhccEEEeCCc
Q 013836 309 RGYIVKWAPQQQ---VLAHPAVGCFWT---HSGWNS-TLESICEG---IPMICQPYFGDQMVNSRYVSHAWRVGLQLEGK 378 (435)
Q Consensus 309 ~~~~~~~~p~~~---ll~~~~v~~~I~---HGG~gs-~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~ 378 (435)
+|.+.+.+|+.+ ++..++| ||. .=|+|- ..|++++| .|+|+--+.+= +..+. .-|+.+..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa----~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA----AEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT----HHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC----HHHhC---CCEEEECC-
Confidence 577778888764 5556777 553 468885 58999996 66655544331 12221 24677776
Q ss_pred CCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 379 LERKEIERAILRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 379 ~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
.+.+.++++|.++|++.. ++-+++.+++.+.+.. -....-.+.+++.+.
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAARP-----WTLEAWVQAQLDGLA 471 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHh
Confidence 899999999999998632 3455555555555542 334444555555443
No 65
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=79.22 E-value=1.3 Score=39.01 Aligned_cols=38 Identities=11% Similarity=0.124 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQ--GHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++|+.+|++.... |=-.-...|++.|.++|++|.++-+
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 4577666665443 8888999999999999999999865
No 66
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=77.52 E-value=2.5 Score=39.80 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=59.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCCCCCCCCCCCHHHHHHHH
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSETYQPSKVADDIPALLLSL 93 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (435)
..|++++ .|++-.+.=+-+|.++|.++ ++..++.|. ++... ....+-|..+. ..-+.. .......++......+
T Consensus 9 ~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tg-qh~~~-~~~~~~~~~~~-i~~~~~-~l~~~~~~~~~~~~~~ 82 (385)
T 4hwg_A 9 MLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTG-QNYAY-ELNQVFFDDMG-IRKPDY-FLEVAADNTAKSIGLV 82 (385)
T ss_dssp CCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECS-CHHHH-HHTHHHHC-CC-CCCCSE-ECCCCCCCSHHHHHHH
T ss_pred hhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeC-CCCCh-hHHHHHHhhCC-CCCCce-ecCCCCCCHHHHHHHH
Confidence 3566555 48999999999999999888 998888883 32110 00111111111 000100 0001112222222211
Q ss_pred HHhcchHHHHHHHHHHhccCCcCCCCccEEEE--cCchhhHHHHHHHcCCCeEEE
Q 013836 94 NAKCIVPFRDCLANKLMSNAQESKDSFACLIT--DAAWFIALSVANDFKLPTIVL 146 (435)
Q Consensus 94 ~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~--D~~~~~~~~~A~~~giP~v~~ 146 (435)
...+++.+++ .+||+|++ |..+.++..+|.++|||.+.+
T Consensus 83 ----~~~l~~~l~~----------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 83 ----IEKVDEVLEK----------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp ----HHHHHHHHHH----------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred ----HHHHHHHHHh----------cCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 2223333433 57999986 334444578899999997654
No 67
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=77.37 E-value=13 Score=32.50 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCCCCC
Q 013836 15 RRVILFPLPFQGHINP-MLQLGSILYSEGFSITIIHTTLNS 54 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p-~l~La~~L~~rGH~Vt~~~~~~~~ 54 (435)
+|||+.--= |---| +..|+++|.+.| +|+++.|..+.
T Consensus 2 p~ILlTNDD--Gi~apGi~~L~~~l~~~g-~V~VvAP~~~~ 39 (251)
T 2wqk_A 2 PTFLLVNDD--GYFSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp CEEEEECSS--CTTCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CEEEEEcCC--CCCcHHHHHHHHHHHhCC-CEEEEeeCCCC
Confidence 456665532 33344 667889998888 59999996543
No 68
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=76.29 E-value=3.9 Score=37.23 Aligned_cols=49 Identities=10% Similarity=-0.010 Sum_probs=39.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCc
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPNSCNYPHF 63 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~ 63 (435)
|||+++-..+-||+.-..++.+.|.++ +.+|++++.+...+.....+++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~v 51 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAV 51 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTSTTE
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcCCCC
Confidence 689999988889999999999999998 9999999996543333333444
No 69
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=76.29 E-value=10 Score=38.39 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=33.6
Q ss_pred CCceEE---eecchh---------hhhcCCccceEeec---cCcc-chHHHHhhCCCeeeccCC
Q 013836 308 GRGYIV---KWAPQQ---------QVLAHPAVGCFWTH---SGWN-STLESICEGIPMICQPYF 355 (435)
Q Consensus 308 ~~~~~~---~~~p~~---------~ll~~~~v~~~I~H---GG~g-s~~eal~~GvP~v~~P~~ 355 (435)
++|.++ .|++.. ++++.+++ ||.= =|+| +.+||+++|+|+|+.-..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 455543 787764 57888888 7743 3454 889999999999997664
No 70
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=75.95 E-value=24 Score=29.05 Aligned_cols=38 Identities=21% Similarity=0.395 Sum_probs=30.4
Q ss_pred CEEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 15 RRVILFP--LPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 15 ~~il~~~--~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
||++.+. -|+.|=-.-...||..|+++|++|.++-.++
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 4555554 3455888999999999999999999998864
No 71
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=74.37 E-value=2.7 Score=40.45 Aligned_cols=104 Identities=14% Similarity=0.094 Sum_probs=59.6
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccC-CCCCCCCCCCCCCCCHH
Q 013836 9 KLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSD-DGFSETYQPSKVADDIP 87 (435)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 87 (435)
++.+++||-+|++. +|=.-++.+++.|.+.|.++.--... ...-...|+.+..+.. .++|+.+.-...+.++.
T Consensus 4 ~~~~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~ATgGT---ak~L~e~GI~v~~V~~vTgfPEil~GRVKTLHP~ 77 (523)
T 3zzm_A 4 DDGRRPIRRALISV---YDKTGLVDLAQGLSAAGVEIISTGST---AKTIADTGIPVTPVEQLTGFPEVLDGRVKTLHPR 77 (523)
T ss_dssp CCCCCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEEECHHH---HHHHHTTTCCCEEHHHHHSCCCCTTTTSSSCSHH
T ss_pred ccccccccEEEEEE---eccccHHHHHHHHHHCCCEEEEcchH---HHHHHHcCCceeeccccCCCchhhCCccccCCch
Confidence 45566677777776 45556889999999999998632221 1111235777777765 56776633234444543
Q ss_pred HHHHHHHH--hcchHHHHHHHHHHhccCCcCCCCccEEEEcC
Q 013836 88 ALLLSLNA--KCIVPFRDCLANKLMSNAQESKDSFACLITDA 127 (435)
Q Consensus 88 ~~~~~~~~--~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~ 127 (435)
...-+.. ..... ++++.+..- .+.|+||++.
T Consensus 78 -ihgGiLa~r~~~~h----~~~l~~~~i----~~iDlVvvNL 110 (523)
T 3zzm_A 78 -VHAGLLADLRKSEH----AAALEQLGI----EAFELVVVNL 110 (523)
T ss_dssp -HHHHHHCCTTSHHH----HHHHHHHTC----CCCSEEEEEC
T ss_pred -hhhhhccCCCCHHH----HHHHHHCCC----CceeEEEEeC
Confidence 3333322 22222 233333222 6799999994
No 72
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=71.74 E-value=5.7 Score=30.96 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=27.6
Q ss_pred CCEEEEEcC-C--CccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPL-P--FQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~-~--~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+|++|+.. + +.......+.+|...++.||+|+++.+
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~ 54 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFM 54 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
Confidence 345554433 3 346777888899999999999999988
No 73
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=71.24 E-value=5.9 Score=33.61 Aligned_cols=38 Identities=18% Similarity=0.117 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+++||++--.|+.|-+. ...|.+.|.++|++|.++.++
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECc
Confidence 34688888888887777 899999999999999999995
No 74
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=71.06 E-value=4 Score=36.54 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|||++. |+.|-+- ..|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 786654 5666654 4578999999999999875
No 75
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=69.64 E-value=25 Score=30.12 Aligned_cols=104 Identities=3% Similarity=-0.069 Sum_probs=61.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEEccCCCCCCCCCCCCCCCCHHH
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPN---SCNYPHFEFCSFSDDGFSETYQPSKVADDIPA 88 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (435)
+|||+|+.+|+.+ .+.++.++|.+. +++|..+.+...... .+...|+.+..+++..+ .+-
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~----------~~r-- 86 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAY----------PSR-- 86 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGS----------SSH--
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccc----------cch--
Confidence 5799999876642 477788888877 789877776432111 12235777766551111 110
Q ss_pred HHHHHHHhcchHHH-HHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEccc
Q 013836 89 LLLSLNAKCIVPFR-DCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 89 ~~~~~~~~~~~~l~-~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (435)
..+. ++++.+.+ .+||+||+-.+. .-...+-+.+...++-++++
T Consensus 87 ----------~~~~~~~~~~l~~-------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 87 ----------TAFDAALAERLQA-------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ----------HHHHHHHHHHHHH-------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ----------hhccHHHHHHHHh-------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 1121 23444544 579999987653 54556667777777777664
No 76
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=69.13 E-value=13 Score=31.08 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=60.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-----CCCCCCceEEEccCCCCCCCCCCCCCCCCHHH
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPN-----SCNYPHFEFCSFSDDGFSETYQPSKVADDIPA 88 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (435)
+-.|++++..+.|--.-.+.+|-+.+.+|++|.++........ ..+.-++.+.... .++. ....+...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L~v~~~~~g-~gf~------~~~~~~~~ 100 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMA-TGFT------WETQNREA 100 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGTCEEEECC-TTCC------CCGGGHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhCCcEEEEcc-cccc------cCCCCcHH
Confidence 4578888888899999999999999999999999976432101 0011247777777 4332 11111111
Q ss_pred HHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchh
Q 013836 89 LLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWF 130 (435)
Q Consensus 89 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~ 130 (435)
- .......+....+.+.+ .++|+||.|-+..
T Consensus 101 ~----~~~a~~~l~~a~~~l~~-------~~yDlvILDEi~~ 131 (196)
T 1g5t_A 101 D----TAACMAVWQHGKRMLAD-------PLLDMVVLDELTY 131 (196)
T ss_dssp H----HHHHHHHHHHHHHHTTC-------TTCSEEEEETHHH
T ss_pred H----HHHHHHHHHHHHHHHhc-------CCCCEEEEeCCCc
Confidence 1 11123333334444433 6799999998654
No 77
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=69.09 E-value=34 Score=30.07 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=32.2
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 14 GRRVILFPL--PFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 14 ~~~il~~~~--~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
++++++++. |+.|--.-...||..|+++|.+|.++-.+..
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 456666654 5668889999999999999999999988643
No 78
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=69.02 E-value=2.5 Score=39.42 Aligned_cols=45 Identities=20% Similarity=0.175 Sum_probs=30.3
Q ss_pred CCccCCCCCCCCCCC-EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 1 METQQDPCKLPRNGR-RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 1 ~~~~~~~~~~~~~~~-~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|+|.++.++.+|-+| ||.|+=.|..| ..+|..|.++||+|+++..
T Consensus 1 ~~~~~~~~~~~~m~M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r 46 (366)
T 1evy_A 1 MSTKQHSAKDELLYLNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHM 46 (366)
T ss_dssp --------CCCCCCEEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECS
T ss_pred CccchhhhhhHhhccCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 567778788887666 89998776666 4678999999999999866
No 79
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=68.97 E-value=6.4 Score=33.37 Aligned_cols=40 Identities=15% Similarity=0.052 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
.++++||++...|+.+-+. ...|.+.|.++| +|.++.++.
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~ 55 (209)
T 1mvl_A 16 TPRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKS 55 (209)
T ss_dssp ---CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTG
T ss_pred ccCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcch
Confidence 3557899999989988776 899999999999 999999963
No 80
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=68.48 E-value=4 Score=32.45 Aligned_cols=35 Identities=14% Similarity=0.183 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|++.||+++= .|++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 5678888883 35544 78899999999999999883
No 81
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=68.23 E-value=31 Score=30.62 Aligned_cols=40 Identities=13% Similarity=0.213 Sum_probs=31.4
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 14 GRRVILFPL--PFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 14 ~~~il~~~~--~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
+.|+++++. |+.|--.-...||..|+++|.+|.++-.+..
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 345555544 4558899999999999999999999988654
No 82
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=68.01 E-value=6.5 Score=32.96 Aligned_cols=36 Identities=11% Similarity=-0.002 Sum_probs=31.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSE-GFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~r-GH~Vt~~~~~ 51 (435)
|||++-..|+.|-+. ...|.+.|.++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 688888888877766 89999999999 9999999995
No 83
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=67.63 E-value=6.6 Score=33.09 Aligned_cols=40 Identities=18% Similarity=-0.042 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEeCCC
Q 013836 12 RNGRRVILFPLPFQGHIN-PMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~-p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
++++||++--.|+ +..+ =.+.|.+.|.++|++|.++.++.
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 4567898888877 4455 78999999999999999999953
No 84
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=67.08 E-value=5.4 Score=32.26 Aligned_cols=39 Identities=15% Similarity=0.252 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++.+|++.+.++..|-....-++..|..+|++|+.....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 578999999999999999999999999999999998763
No 85
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=66.34 E-value=7.8 Score=31.80 Aligned_cols=37 Identities=19% Similarity=0.061 Sum_probs=31.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
+||++.-.|+.|=+. ...|.+.|.++|++|.++.++.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~ 42 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTN 42 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcC
Confidence 678887777766654 8899999999999999999953
No 86
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=65.77 E-value=9.4 Score=34.02 Aligned_cols=46 Identities=15% Similarity=0.055 Sum_probs=25.0
Q ss_pred CCCCCCCCCCCEEEEEc-CCCccChHH--HHHHHHHHHhCCCeEEEEeC
Q 013836 5 QDPCKLPRNGRRVILFP-LPFQGHINP--MLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 5 ~~~~~~~~~~~~il~~~-~~~~GHv~p--~l~La~~L~~rGH~Vt~~~~ 50 (435)
+......|+.|||+++- .|-..-++- .-.+.+.|.++||+|+++--
T Consensus 13 ~~t~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 13 LGTENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp ---------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred cCCCcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 34455678899998664 343333333 23456888889999999865
No 87
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=65.31 E-value=53 Score=30.84 Aligned_cols=35 Identities=6% Similarity=-0.012 Sum_probs=23.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
++.||+++.. ++.+ . .+.++..+.|++|+++.+..
T Consensus 4 ~~k~l~Il~~-~~~~-~---~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 4 RNKNLAIICQ-NKHL-P---FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp CCCEEEEECC-CTTC-C---HHHHHHHHTTCEEEEEEETT
T ss_pred CCcEEEEECC-ChhH-H---HHHHHHHHCCCEEEEEECCC
Confidence 4567777764 3322 2 24677778899999998743
No 88
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=64.79 E-value=29 Score=31.03 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=31.8
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 14 GRRVILFPL--PFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 14 ~~~il~~~~--~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
++++++++. |+.|--.-...||..|+++|.+|.++-.+..
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r 144 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLR 144 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 455555554 4668899999999999999999999988643
No 89
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=64.67 E-value=7.2 Score=32.99 Aligned_cols=39 Identities=13% Similarity=0.026 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINP-MLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p-~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++++||++--.|+ +..+- ...|.+.|.++|++|.++.++
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 4567888887776 44554 789999999999999999995
No 90
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=64.37 E-value=6.5 Score=32.92 Aligned_cols=39 Identities=8% Similarity=-0.047 Sum_probs=32.8
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++++||++...|+.|=+. ...|.+.|.++|++|.++.++
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~ 44 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTK 44 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEch
Confidence 345788888888877665 789999999999999999995
No 91
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=63.99 E-value=7.8 Score=34.28 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=26.3
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|++|+|++. |+ |-+ -..|+++|.++||+|+.++-.
T Consensus 1 M~~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIA--GC-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 566788877 44 633 457899999999999999873
No 92
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=62.77 E-value=17 Score=29.81 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|+.|+|+++ |+.|-+ -..|+++|.++||+|+.++-.
T Consensus 1 M~~~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 344676655 555544 357889999999999998864
No 93
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=60.91 E-value=12 Score=29.51 Aligned_cols=38 Identities=13% Similarity=0.133 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQ--GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.||++++-.-=. ..+--.+=++..|.++||+|++.+++
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCH
Confidence 577776653322 44444677899999999999999995
No 94
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=60.07 E-value=13 Score=32.55 Aligned_cols=40 Identities=10% Similarity=0.070 Sum_probs=36.9
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.++.+|++.+.++..|-....-++..|..+|++|+.++..
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4578999999999999999999999999999999999874
No 95
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=59.43 E-value=14 Score=32.36 Aligned_cols=42 Identities=12% Similarity=-0.022 Sum_probs=29.3
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNS 54 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~ 54 (435)
.+++||||+.--=+. |--=...|+++|.+ +|+|+++.|..+.
T Consensus 8 ~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNR 49 (261)
T ss_dssp ---CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred cCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCC
Confidence 345799998875544 33446778888876 8999999997544
No 96
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=59.38 E-value=11 Score=31.83 Aligned_cols=39 Identities=15% Similarity=0.085 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++.+|++.+.++..|-....-++..|..+|++|+.+...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467999999999999999999999999999999998873
No 97
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=58.76 E-value=15 Score=33.33 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=27.2
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
|++|||+|+-.+ .......++|.++||+|..+.+.+.
T Consensus 5 ~~~mrivf~Gt~-----~fa~~~L~~L~~~~~~v~~Vvt~pd 41 (318)
T 3q0i_A 5 SQSLRIVFAGTP-----DFAARHLAALLSSEHEIIAVYTQPE 41 (318)
T ss_dssp --CCEEEEECCS-----HHHHHHHHHHHTSSSEEEEEECCCC
T ss_pred ccCCEEEEEecC-----HHHHHHHHHHHHCCCcEEEEEcCCC
Confidence 678999998654 3445667889999999998888543
No 98
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=58.55 E-value=11 Score=29.78 Aligned_cols=33 Identities=15% Similarity=0.468 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.++|+++=. |.+- ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 588888843 4433 56789999999999999874
No 99
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=58.49 E-value=32 Score=26.57 Aligned_cols=64 Identities=13% Similarity=0.077 Sum_probs=42.8
Q ss_pred hCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Q 013836 345 EGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVKADSQEMRERATYLNEKVDI 413 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 413 (435)
..+|+|++--..+ ........+ .|+--.+.+.++.++|.++|++++.. ..+++..+++++.+.+
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~~ 137 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK---RRLVMENRSLRRAAEA 137 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 4788888866555 334445555 47755555569999999999999987 5665555555555443
No 100
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=58.31 E-value=13 Score=36.45 Aligned_cols=42 Identities=14% Similarity=0.066 Sum_probs=32.4
Q ss_pred CCCCCCEEEEEcCCCccC--hHHHHHHHHH--HHhCCCeEEEEeCC
Q 013836 10 LPRNGRRVILFPLPFQGH--INPMLQLGSI--LYSEGFSITIIHTT 51 (435)
Q Consensus 10 ~~~~~~~il~~~~~~~GH--v~p~l~La~~--L~~rGH~Vt~~~~~ 51 (435)
.+.++|||+++.....+| -.-+..|++. |.++||+|++++..
T Consensus 201 ~~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 201 RSKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp CSSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 346789999998765544 3456788999 67779999999973
No 101
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=57.62 E-value=31 Score=29.06 Aligned_cols=108 Identities=9% Similarity=0.002 Sum_probs=60.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEEccCCCCCCCCCCCCCCCC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPN---SCNYPHFEFCSFSDDGFSETYQPSKVADD 85 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (435)
.|.|+||+++.+|..+- +.+|.+++.+. .++|..+.+...... .+...|+.+..++...+ .+
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~----------~~ 70 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDF----------AS 70 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGS----------SS
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCcccc----------CC
Confidence 38889999988766433 55666777654 378888887432111 12235677666651111 11
Q ss_pred HHHHHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEccc
Q 013836 86 IPALLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (435)
. ..... ++++.+.+ .++|+||+-.+. .-...+-+.+.-.++-++++
T Consensus 71 -r-------~~~d~---~~~~~l~~-------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 -K-------EAHED---AILAALDV-------LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -H-------HHHHH---HHHHHHHH-------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -H-------HHHHH---HHHHHHHh-------cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 0 01111 23444444 469999987654 44556666666667776664
No 102
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=57.07 E-value=17 Score=33.15 Aligned_cols=104 Identities=11% Similarity=0.103 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-------CCCCceEEEccCCCCCCCCCCCCCCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSC-------NYPHFEFCSFSDDGFSETYQPSKVAD 84 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (435)
|.+|||+|+ |--+....+.++|.++||+|..+.+.+..+... ...|+.+.... . +.. .
T Consensus 20 ~~~mrIvf~-----G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~-~-~~~--------~ 84 (329)
T 2bw0_A 20 FQSMKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYS-R-WRA--------K 84 (329)
T ss_dssp -CCCEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECS-C-CEE--------T
T ss_pred CCCCEEEEE-----cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecC-c-ccc--------c
Confidence 556999999 222444457899999999998877743322110 11234443333 1 100 0
Q ss_pred CHHHHHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEcccc
Q 013836 85 DIPALLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTDS 150 (435)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~~ 150 (435)
... ..++++.+.. .++|++|+-.+. +-...+-+.....++-++++.
T Consensus 85 ----------~~~---~~~~~~~l~~-------~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 85 ----------GQA---LPDVVAKYQA-------LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp ----------TEE---CHHHHHHHHT-------TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred ----------ccc---cHHHHHHHHh-------cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 001 1234455554 579999987654 444455566666777777663
No 103
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=56.50 E-value=32 Score=29.17 Aligned_cols=103 Identities=8% Similarity=0.032 Sum_probs=59.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCC--eEEEEeCCCCCCC---CCCCCCceEEEccCCCCCCCCCCCCCCCCHHHH
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGF--SITIIHTTLNSPN---SCNYPHFEFCSFSDDGFSETYQPSKVADDIPAL 89 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH--~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
|||+|+..|+.+ .+.++.++|.+.+| +|..+.+...... .+...|+.+..++ . .. ..+
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~-~---~~------~~~---- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQ-R---KE------FPS---- 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECC-G---GG------SSS----
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeC-c---cc------ccc----
Confidence 689988776543 47788888988888 8776666432111 1122466665554 1 01 011
Q ss_pred HHHHHHhcchHHH-HHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEccc
Q 013836 90 LLSLNAKCIVPFR-DCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 90 ~~~~~~~~~~~l~-~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (435)
...+. ++++.+.+ .++|+||+-.+. .-...+-+.+...++-++++
T Consensus 65 --------r~~~~~~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 --------KKEFEERMALELKK-------KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --------HHHHHHHHHHHHHH-------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --------hhhhhHHHHHHHHh-------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 11111 23444544 579999987653 44555666666677777665
No 104
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=56.20 E-value=10 Score=35.32 Aligned_cols=40 Identities=10% Similarity=0.070 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCCCccC----hHHHHHHHHHH-HhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGH----INPMLQLGSIL-YSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GH----v~p~l~La~~L-~~rGH~Vt~~~~~ 51 (435)
|+||||+++..|-.+- +.....++++| .++||+|+.+...
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 5689999998654453 34578899999 9999999999763
No 105
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=55.78 E-value=11 Score=34.22 Aligned_cols=32 Identities=19% Similarity=0.214 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+|+|+++..+ ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 5899998876 5678999999999999999874
No 106
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=55.04 E-value=12 Score=31.67 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYS-EGFSITIIHTTL 52 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~-rGH~Vt~~~~~~ 52 (435)
++++||++...|+.+=+. ...|.++|.+ +|++|.++.++.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~ 57 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTER 57 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHh
Confidence 456789888888877444 5899999999 899999999953
No 107
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=54.61 E-value=39 Score=32.18 Aligned_cols=40 Identities=8% Similarity=0.236 Sum_probs=33.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
+..|+++-.++.|--.-...||..|.++|++|.++..+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~ 139 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTW 139 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCS
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 4566666667779999999999999999999999998654
No 108
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=54.25 E-value=13 Score=32.53 Aligned_cols=45 Identities=24% Similarity=0.166 Sum_probs=35.0
Q ss_pred CCCCCCCEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 9 KLPRNGRRVILFPLPFQ---GHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 9 ~~~~~~~~il~~~~~~~---GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
..-|..||.+|++.|.- |-=.-.-+|+..|..||++||..--++.
T Consensus 17 ~~~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 17 NLYFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp ----CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred ccccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 44577899999998855 5567788999999999999999988643
No 109
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=53.79 E-value=14 Score=31.44 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=25.5
Q ss_pred CCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 10 LPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 10 ~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
..++.|+|++. |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 17 ~~l~~~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 17 LYFQGMRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp ----CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred cCcCCCeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECC
Confidence 44556787655 4555443 46889999999999999863
No 110
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=53.56 E-value=35 Score=23.38 Aligned_cols=48 Identities=10% Similarity=0.118 Sum_probs=35.5
Q ss_pred hCCCeeeccCCCchhHHH---HHHHhhhccEEEeCCcCCHHHHHHHHHHHHc
Q 013836 345 EGIPMICQPYFGDQMVNS---RYVSHAWRVGLQLEGKLERKEIERAILRVMV 393 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na---~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~ 393 (435)
.|+|++++--...|.+.- ....+. |+...+-+.-++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-CcchhhhccCCHHHHHHHHHHHHH
Confidence 689999988888886643 234443 777766667899999999987764
No 111
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=53.50 E-value=19 Score=30.83 Aligned_cols=40 Identities=20% Similarity=0.153 Sum_probs=36.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
-+++|++.--|+.|--.-++.+|.+|+++|++|.++..++
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3688999999999999999999999999999999888854
No 112
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=52.33 E-value=25 Score=29.15 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=31.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+||++...|+.|-+ =...|.++|.++|++|.++.++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECh
Confidence 47888888888855 5789999999999999999995
No 113
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=52.09 E-value=19 Score=30.62 Aligned_cols=40 Identities=18% Similarity=0.093 Sum_probs=35.9
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.++.+|++.+.++..|-....=++..|..+|++|+.++..
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 4578999999999999999999999999999999999874
No 114
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=51.78 E-value=57 Score=27.44 Aligned_cols=103 Identities=7% Similarity=0.056 Sum_probs=60.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEEccCCCCCCCCCCCCCCCCHHHH
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPN---SCNYPHFEFCSFSDDGFSETYQPSKVADDIPAL 89 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
|||+++-.|+.+ .+.++.++|.+. +|+|..+.+...... .+...|+.+..++ . .. ..+
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~-~---~~------~~~---- 66 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFS-P---KD------YPS---- 66 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECC-G---GG------SSS----
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeC-c---cc------ccc----
Confidence 688888776643 467778888887 799988877432111 1123566666555 1 01 011
Q ss_pred HHHHHHhcchHHH-HHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEccc
Q 013836 90 LLSLNAKCIVPFR-DCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 90 ~~~~~~~~~~~l~-~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (435)
...+. ++++.+.+ .+||+||+-.+. .-...+-+.+.-.++-++++
T Consensus 67 --------~~~~~~~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 --------KAAFESEILRELKG-------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp --------HHHHHHHHHHHHHH-------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred --------hhhhHHHHHHHHHh-------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 11112 23444544 579999987653 54556667777777777665
No 115
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=51.03 E-value=25 Score=30.71 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=24.9
Q ss_pred CCccEEE-EcCch-hhHHHHHHHcCCCeEEEcccch
Q 013836 118 DSFACLI-TDAAW-FIALSVANDFKLPTIVLLTDSI 151 (435)
Q Consensus 118 ~~~Dlvi-~D~~~-~~~~~~A~~~giP~v~~~~~~~ 151 (435)
..||+|| +|+.. ..+..=|.++|||+|.+.-+..
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 3688887 56544 5667788999999999866533
No 116
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=51.02 E-value=10 Score=34.59 Aligned_cols=42 Identities=10% Similarity=0.066 Sum_probs=27.3
Q ss_pred ccCCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 3 TQQDPCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 3 ~~~~~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++++-+++-| .|||.|+=.|..| ..+|..|.+.||+|+++..
T Consensus 4 ~~~~~~~~~~-~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 4 DKIHHHHHHM-EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp -----------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cccccccccc-CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 3444444443 6899999777766 5789999999999999876
No 117
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=50.75 E-value=14 Score=28.24 Aligned_cols=33 Identities=24% Similarity=0.465 Sum_probs=24.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+.|+|+++ |+ |.+- ..+++.|.++||+|+++..
T Consensus 3 ~~m~i~Ii--G~-G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIA--GI-GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp --CEEEEE--CC-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEE--CC-CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 45898888 33 6553 4578999999999999876
No 118
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=50.02 E-value=12 Score=34.31 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=29.4
Q ss_pred CCCCEEEEEcCCCccChH----HHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHIN----PMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~----p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|+||||+++..|..+-.. ....++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 568999999854333322 4677899999999999998763
No 119
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=49.30 E-value=7.7 Score=36.70 Aligned_cols=41 Identities=10% Similarity=0.050 Sum_probs=21.0
Q ss_pred CccCCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEE
Q 013836 2 ETQQDPCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSE-GFSITII 48 (435)
Q Consensus 2 ~~~~~~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~r-GH~Vt~~ 48 (435)
+++++-+++-|++|+|+++-.+++.| +++..|++. | +|.++
T Consensus 3 ~~~~~~~~~~~~~~~vlviG~Ggr~~-----a~a~~~a~~~g-~v~~~ 44 (412)
T 1vkz_A 3 SDKIHHHHHHMKAVRVHILGSGGREH-----AIGWAFAKQGY-EVHFY 44 (412)
T ss_dssp -------------CEEEEEECSHHHH-----HHHHHHHHTTC-EEEEE
T ss_pred ccccccchhccccCEEEEECCCHHHH-----HHHHHHHhCCC-CEEEE
Confidence 46788889999999999999886664 467776554 7 87777
No 120
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=48.87 E-value=36 Score=28.86 Aligned_cols=101 Identities=8% Similarity=-0.023 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEEccCCCCCCCCCCCCCCCCHH
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPN---SCNYPHFEFCSFSDDGFSETYQPSKVADDIP 87 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (435)
+++||+++-+|+.+ . +.+|.+++.+. +++|..+.+...... .+...|+.+..++ . .. ..+
T Consensus 7 ~~~ri~vl~SG~gs-n--l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~-~---~~------~~~-- 71 (215)
T 3kcq_A 7 KELRVGVLISGRGS-N--LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVK-R---KP------LDI-- 71 (215)
T ss_dssp CCEEEEEEESSCCH-H--HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECC-B---TT------BCH--
T ss_pred CCCEEEEEEECCcH-H--HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeC-c---cc------CCh--
Confidence 35689888876543 2 55666666554 378888887432111 1123567766665 1 01 000
Q ss_pred HHHHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEccc
Q 013836 88 ALLLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 88 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (435)
.++++.+.+ .++|+||+-.+. .-...+-+.+.-.++-++++
T Consensus 72 --------------~~~~~~L~~-------~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 --------------EHISTVLRE-------HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp --------------HHHHHHHHH-------TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --------------HHHHHHHHH-------hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 334455554 579999987653 54556666777777777665
No 121
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=48.84 E-value=21 Score=29.26 Aligned_cols=77 Identities=10% Similarity=0.052 Sum_probs=42.4
Q ss_pred Eeecchh-hhhcCCccceEeeccCccchHHH---HhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHH
Q 013836 313 VKWAPQQ-QVLAHPAVGCFWTHSGWNSTLES---ICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAI 388 (435)
Q Consensus 313 ~~~~p~~-~ll~~~~v~~~I~HGG~gs~~ea---l~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i 388 (435)
++..+.. .++..-+-..++-=||.||+.|+ +.+++|++++|.+. .....+... -.....- .-+++++.+.+
T Consensus 94 ~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~-~~~~~e~~~~l 168 (176)
T 2iz6_A 94 TGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHV-AADVAGAIAAV 168 (176)
T ss_dssp CCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEE-ESSHHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEE-cCCHHHHHHHH
Confidence 4555544 33332222346667899986654 67999999999832 111222221 1111111 35778888877
Q ss_pred HHHHcC
Q 013836 389 LRVMVK 394 (435)
Q Consensus 389 ~~vl~~ 394 (435)
.+.+.+
T Consensus 169 ~~~~~~ 174 (176)
T 2iz6_A 169 KQLLAK 174 (176)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 766543
No 122
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=48.79 E-value=23 Score=27.11 Aligned_cols=37 Identities=11% Similarity=0.058 Sum_probs=26.0
Q ss_pred CEEEEE-cCCCcc--ChHHHHHHHHHHHhCCCeE-EEEeCC
Q 013836 15 RRVILF-PLPFQG--HINPMLQLGSILYSEGFSI-TIIHTT 51 (435)
Q Consensus 15 ~~il~~-~~~~~G--Hv~p~l~La~~L~~rGH~V-t~~~~~ 51 (435)
||++|+ +.+-+| .....+.+|..+.+.||+| .++-..
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 445443 333344 3556788999999999999 888873
No 123
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=48.76 E-value=12 Score=34.38 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=25.5
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|++|||+++=.|..| ..+|..|.++||+|+++..
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 556899999665555 3478889999999998865
No 124
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=47.05 E-value=14 Score=31.60 Aligned_cols=39 Identities=13% Similarity=-0.030 Sum_probs=33.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
|||+|..-|+-|=-.-...||..|+++|++|.++-.+.+
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 688887666678899999999999999999999988653
No 125
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=46.62 E-value=10 Score=35.04 Aligned_cols=40 Identities=8% Similarity=-0.002 Sum_probs=29.0
Q ss_pred CCCCEEEEEcCCCccCh----HHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHI----NPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv----~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|+||||+++..|..+.. .....++++|.++||+|+.+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 66899999985443333 34577899999999999999863
No 126
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=46.22 E-value=13 Score=33.18 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++|||+|+=.|..| ..+|..|.++||+|+++..
T Consensus 2 ~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 45899998665555 4678999999999999876
No 127
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=46.14 E-value=12 Score=34.20 Aligned_cols=34 Identities=21% Similarity=0.185 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|+.|||+++=.|+.| ..+|..|+++||+|+++..
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLAR 34 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 456899999776666 4578999999999999986
No 128
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=45.94 E-value=34 Score=29.62 Aligned_cols=40 Identities=15% Similarity=0.344 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCcc-----------ChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQG-----------HINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~G-----------Hv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|.++||+++.....+ ...=++.....|.+.|++|+++++.
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344688887765322 2234666778999999999999984
No 129
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=45.85 E-value=16 Score=30.79 Aligned_cols=33 Identities=18% Similarity=0.382 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|+|+++ |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 5 ~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 565544 5566554 57889999999999998874
No 130
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=45.24 E-value=26 Score=31.65 Aligned_cols=34 Identities=6% Similarity=0.021 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhC-C-CeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSE-G-FSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~r-G-H~Vt~~~~~ 51 (435)
|++|+|+++..+.. .+|++.|.+. | ++|.++...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 78899999865554 4789999886 7 888888663
No 131
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=45.15 E-value=37 Score=25.00 Aligned_cols=40 Identities=8% Similarity=-0.028 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|+++||+++|..+.|--.-.-.+=+.+.++|.++.+-..+
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 5668999999888866666668888999999998877664
No 132
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=45.05 E-value=31 Score=28.92 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|+|.|+=.|..| ..+|+.|.++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 6899988665555 5678999999999998865
No 133
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=44.50 E-value=26 Score=29.16 Aligned_cols=43 Identities=5% Similarity=-0.039 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcccch
Q 013836 99 VPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTDSI 151 (435)
Q Consensus 99 ~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~~~ 151 (435)
......++++.+ .+.|+||.|. .+..+|+++|+|.+.+.++.-
T Consensus 129 ~e~~~~i~~l~~-------~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 129 DEITTLISKVKT-------ENIKIVVSGK---TVTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp GGHHHHHHHHHH-------TTCCEEEECH---HHHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHHHHHH-------CCCeEEECCH---HHHHHHHHcCCcEEEEecCHH
Confidence 456677888887 6899999985 357899999999998776543
No 134
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=44.23 E-value=19 Score=29.59 Aligned_cols=37 Identities=8% Similarity=-0.000 Sum_probs=29.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
+||++.-.|+.+=+ =...+.+.|.++|++|.++.++.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 39 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPS 39 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchh
Confidence 35666666666555 67899999999999999999953
No 135
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=44.01 E-value=18 Score=32.93 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=25.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+|.+|+|++. |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 7 ~M~~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 7 PSPKGRVLIA--GATGFIG--QFVATASLDAHRPTYILARP 43 (346)
T ss_dssp ----CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECS
T ss_pred CCCCCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4777787665 5666544 46789999999999998874
No 136
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=43.97 E-value=97 Score=29.58 Aligned_cols=87 Identities=15% Similarity=0.128 Sum_probs=51.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEccCCCCCCCCCCCCCCCCHHHHHHHH
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFSDDGFSETYQPSKVADDIPALLLSL 93 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (435)
..|++++.- -.-.+++++-|.+-|.+|+.+.+........+ .+.. ....
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~-------------~~~~---~v~~---------- 361 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVD-------------SPLP---SVRV---------- 361 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTT-------------TTSS---CEEE----------
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhh-------------CccC---cEEe----------
Confidence 467777532 34557888999888999999988542111110 0000 0000
Q ss_pred HHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEE
Q 013836 94 NAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVL 146 (435)
Q Consensus 94 ~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~ 146 (435)
..+.+ ++++.+. .+||++|.+.. ...+|+++|||++.+
T Consensus 362 -----~D~~~-le~~i~~------~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 362 -----GDLED-LEHAARA------GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp -----SHHHH-HHHHHHH------HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred -----CCHHH-HHHHHHh------cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 11111 2222222 47999999863 567999999999874
No 137
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=43.74 E-value=11 Score=38.72 Aligned_cols=108 Identities=9% Similarity=0.014 Sum_probs=76.0
Q ss_pred ecchhhhhcCCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeC-----C-cCCHHHHHHHH
Q 013836 315 WAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLE-----G-KLERKEIERAI 388 (435)
Q Consensus 315 ~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~-----~-~~~~~~l~~~i 388 (435)
+.+-.++|..+++ +||- =...+.|.+..++|+|....-.|+... .. .|.=.... . --+.++|.++|
T Consensus 606 ~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~----~~-rg~y~d~~~~~pg~~~~~~~eL~~~i 677 (729)
T 3l7i_A 606 YNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDK----GL-RGFYMNYMEDLPGPIYTEPYGLAKEL 677 (729)
T ss_dssp CSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTS----SC-CSBSSCTTSSSSSCEESSHHHHHHHH
T ss_pred CcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhh----cc-CCcccChhHhCCCCeECCHHHHHHHH
Confidence 3444578888888 9988 356788999999999999877776543 11 14333221 1 46789999999
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 013836 389 LRVMVKADSQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHIM 433 (435)
Q Consensus 389 ~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 433 (435)
.....+. ..|+++.+++.+++.. ..+|.++.+.++.+.+...
T Consensus 678 ~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 678 KNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp TTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHHH
T ss_pred hhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcCc
Confidence 9887632 6788888888888853 2367777777777776543
No 138
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=43.39 E-value=23 Score=30.26 Aligned_cols=38 Identities=8% Similarity=-0.011 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQ--GHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++||.+|++.... |--.-...|++.|.++|.+|.++-+
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 4577666665533 8899999999999999999999764
No 139
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=43.38 E-value=1.2e+02 Score=25.52 Aligned_cols=103 Identities=3% Similarity=0.022 Sum_probs=60.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEEccCCCCCCCCCCCCCCCCHHHH
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPN---SCNYPHFEFCSFSDDGFSETYQPSKVADDIPAL 89 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
|||+++.++..+ -+.+|.+++.+. +|+|..+.+...... .+...|+.+..+++..+ .+
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~----------~~---- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAF----------DS---- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGC----------SS----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccc----------cc----
Confidence 578888876654 467778887776 689987777432211 12235777766551111 11
Q ss_pred HHHHHHhcchHHH-HHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEccc
Q 013836 90 LLSLNAKCIVPFR-DCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 90 ~~~~~~~~~~~l~-~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (435)
...+. ++++.+.+ .++|+||+-.+. .-...+-+.+...++-++++
T Consensus 64 --------r~~~~~~~~~~l~~-------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 64 --------REAYDRELIHEIDM-------YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp --------HHHHHHHHHHHHGG-------GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --------hhhccHHHHHHHHh-------cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 01122 23455544 579999987653 44556667777777777665
No 140
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=41.85 E-value=39 Score=28.60 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEG-FSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rG-H~Vt~~~~~ 51 (435)
|+.++++ |+.|-+- ..|+++|.++| |+|+++.-.
T Consensus 23 mk~vlVt-GatG~iG--~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 23 MKNVLIL-GAGGQIA--RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CEEEEEE-TTTSHHH--HHHHHHHTTCTTEEEEEEESS
T ss_pred ccEEEEE-eCCcHHH--HHHHHHHHhCCCceEEEEEcC
Confidence 5555666 4455443 57889999999 999998764
No 141
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=41.56 E-value=37 Score=29.54 Aligned_cols=47 Identities=15% Similarity=0.169 Sum_probs=24.6
Q ss_pred CCccCCCCCCCCC-CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 1 METQQDPCKLPRN-GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 1 ~~~~~~~~~~~~~-~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|..++-|....|+ +.|.++++.+ .|-+ -..++++|+++|++|+++..
T Consensus 1 m~~~~~~~~~~~~l~~k~vlITGa-sggi--G~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 1 MGSTSTPDSSTNRLQDKVAIITGG-AGGI--GETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp ----------CCTTTTCEEEEEST-TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCCCCcccccCCEEEEECC-CCHH--HHHHHHHHHHCCCEEEEEcC
Confidence 4444545544443 2345566644 4422 35789999999999998865
No 142
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=41.11 E-value=79 Score=23.61 Aligned_cols=62 Identities=6% Similarity=-0.055 Sum_probs=36.0
Q ss_pred hCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q 013836 345 EGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVKADSQEMRERATYLNEK 410 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~ 410 (435)
..+|+|++--..|.......+.. .|+---+.+.++.++|..+|++++.. ...++..+++...
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~ 132 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLTKPWHPEQLLSSARNAARM---FTLARENERLSLE 132 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhccCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 35677776655554333344444 24533343459999999999999876 4444444444333
No 143
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=40.92 E-value=53 Score=28.18 Aligned_cols=53 Identities=9% Similarity=0.117 Sum_probs=44.9
Q ss_pred CCccCCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013836 1 METQQDPCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNS 54 (435)
Q Consensus 1 ~~~~~~~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~ 54 (435)
|.-+-++++..++...+++.-.|+-|=-.-...|+..|. +|.+|.++..++..
T Consensus 1 ~~~~~~~~~~~~~~~i~~~~GkgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~~ 53 (262)
T 1yrb_A 1 MRGSHHHHHHGMASMIVVFVGTAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTGV 53 (262)
T ss_dssp CTTCCCCCCTTCCCEEEEEECSTTSSHHHHHHHHHHHHT-TTSCEEEEECCSSC
T ss_pred CCCccccccCCcceEEEEEeCCCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCCc
Confidence 444567788888888888888889999999999999999 99999999986543
No 144
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=40.65 E-value=18 Score=33.46 Aligned_cols=40 Identities=8% Similarity=-0.033 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCCccChHHH----HHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPM----LQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~----l~La~~L~~rGH~Vt~~~~~ 51 (435)
|+||||+++..|..+--.-. ..++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 67899999997766554444 48889998899999999874
No 145
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=40.21 E-value=24 Score=26.13 Aligned_cols=26 Identities=12% Similarity=0.144 Sum_probs=21.9
Q ss_pred cChHHHHHHHHHHHhC-CC-eEEEEeCC
Q 013836 26 GHINPMLQLGSILYSE-GF-SITIIHTT 51 (435)
Q Consensus 26 GHv~p~l~La~~L~~r-GH-~Vt~~~~~ 51 (435)
......+.+|..+.+. || +|+++...
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 4566789999999999 99 99998883
No 146
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=40.01 E-value=27 Score=30.99 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+|+|+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 3565554 5666663 46789999999999988763
No 147
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=39.94 E-value=83 Score=30.79 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
..|++++.-+. + .+.+++.|.+-|-+|..+.+...
T Consensus 335 GKrv~i~~~~~--~---~~~l~~~l~ElGm~vv~~~t~~~ 369 (533)
T 1mio_A 335 GKTACLYVGGS--R---SHTYMNMLKSFGVDSLVAGFEFA 369 (533)
T ss_dssp TCEEEEEESSS--H---HHHHHHHHHHHTCEEEEEEESSC
T ss_pred CCEEEEECCch--H---HHHHHHHHHHCCCEEEEEEeccC
Confidence 46788766442 3 55667777778999999987543
No 148
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=39.91 E-value=1.7e+02 Score=24.68 Aligned_cols=37 Identities=11% Similarity=0.157 Sum_probs=31.0
Q ss_pred CEEEEEcCC-CccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLP-FQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~-~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
-.+.+++.+ +.|=-.-++.++..+..+|..|.++.+.
T Consensus 12 G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~ 49 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPK 49 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEec
Confidence 356666666 7799999999999999999999999874
No 149
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=39.87 E-value=28 Score=30.10 Aligned_cols=40 Identities=8% Similarity=0.049 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 11 PRNGRRVILFPLPFQ--GHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 11 ~~~~~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
-+++++.+|++.... |=-.-...|++.|.++|.+|.++=+
T Consensus 17 ~~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 17 LYFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp --CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred HhhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 344567776665544 8888999999999999999999865
No 150
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=39.33 E-value=30 Score=31.42 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=28.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+||.|+=.+..| +-.+|+.|.++||+|+..-.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4789999998888 44699999999999998766
No 151
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=38.39 E-value=53 Score=28.13 Aligned_cols=26 Identities=27% Similarity=0.473 Sum_probs=20.9
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 25 QGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 25 ~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
.|.+ -.++|++|.++|++|+++..+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 5543 4578999999999999999853
No 152
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=37.82 E-value=13 Score=32.88 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=37.4
Q ss_pred CCccceEeeccCccchHHHHhh------CCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcC
Q 013836 324 HPAVGCFWTHSGWNSTLESICE------GIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVK 394 (435)
Q Consensus 324 ~~~v~~~I~HGG~gs~~eal~~------GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~ 394 (435)
.+++ +|.=||=||+.+++.. ++|++.+|... +|. +. .+.++++.+++++++++
T Consensus 35 ~~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~------------lgf---l~-~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 35 EPEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH------------LGF---YA-DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SCSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS------------CCS---SC-CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC------------CCc---CC-cCCHHHHHHHHHHHHcC
Confidence 3555 9999999999999875 89999998611 231 11 24566777777777764
No 153
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=37.69 E-value=34 Score=30.21 Aligned_cols=41 Identities=22% Similarity=0.213 Sum_probs=31.0
Q ss_pred CCCCEEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 12 RNGRRVILFPL--PFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 12 ~~~~~il~~~~--~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
|+.+|++.+.. |+.|--.-...||..|+++|++|.++-.+.
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 34455665543 455888999999999999999999998865
No 154
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=37.63 E-value=22 Score=32.09 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=25.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITII 48 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~ 48 (435)
..++|||+++=.|+.| ..+|..|++.||+|+++
T Consensus 16 ~~~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp ----CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred hccCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 3458999999777777 46788999999999999
No 155
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=37.57 E-value=33 Score=31.18 Aligned_cols=46 Identities=15% Similarity=0.044 Sum_probs=27.2
Q ss_pred CCCCCCCCCC-CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 5 QDPCKLPRNG-RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 5 ~~~~~~~~~~-~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.......|.+ +|++++..|..|.-.-.-.+.+.|.++|+++.+..+
T Consensus 19 ~~~~~~~m~~~~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t 65 (332)
T 2bon_A 19 ETLYIQGMAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVT 65 (332)
T ss_dssp -----------CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEEC
T ss_pred cchhhhhhhhcceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEe
Confidence 3334445553 367777777776545556788889999999988776
No 156
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=37.25 E-value=59 Score=27.89 Aligned_cols=38 Identities=18% Similarity=0.315 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCc-----------cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQ-----------GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~-----------GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++||+|+..... -...=+....+.|.+.|++|+++++.
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 357888776422 13455667778899999999999984
No 157
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=37.16 E-value=44 Score=29.95 Aligned_cols=39 Identities=8% Similarity=-0.071 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGH----INPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GH----v~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
..++||+++..|..+. +.....++++|.++||+|+.+.+
T Consensus 11 ~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~ 53 (317)
T 4eg0_A 11 KRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDP 53 (317)
T ss_dssp GGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred hhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3468899888654432 34678899999999999999985
No 158
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=36.88 E-value=22 Score=33.19 Aligned_cols=41 Identities=15% Similarity=-0.043 Sum_probs=31.1
Q ss_pred CCCCCEEEEEcCCCccChHHH----HHHHHHHHhCCCeEEEEeCC
Q 013836 11 PRNGRRVILFPLPFQGHINPM----LQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~----l~La~~L~~rGH~Vt~~~~~ 51 (435)
.|+||||+++..|..+--.-. ..++++|.+.||+|+.+...
T Consensus 19 ~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 19 HMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp --CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 477899999987766554444 47889998889999999874
No 159
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=36.19 E-value=32 Score=30.53 Aligned_cols=37 Identities=5% Similarity=0.069 Sum_probs=28.7
Q ss_pred CEEEEEcCCCccC---hHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGH---INPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GH---v~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 6999999875321 234577999999999999999873
No 160
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=36.17 E-value=57 Score=25.42 Aligned_cols=37 Identities=16% Similarity=0.312 Sum_probs=26.5
Q ss_pred CCEEEEEc-CCCccChHH--HHHHHHHHHhCCCeE-EEEeC
Q 013836 14 GRRVILFP-LPFQGHINP--MLQLGSILYSEGFSI-TIIHT 50 (435)
Q Consensus 14 ~~~il~~~-~~~~GHv~p--~l~La~~L~~rGH~V-t~~~~ 50 (435)
.||++|+- .+-+|.-.. .+.+|+.+.+.||+| .++-.
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~ 52 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFY 52 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEe
Confidence 36776554 444566555 567799999999999 77776
No 161
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=36.14 E-value=22 Score=27.30 Aligned_cols=33 Identities=12% Similarity=0.053 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++||+++=. |.+ -..+++.|.++||+|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 357777643 443 467899999999999999874
No 162
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=35.83 E-value=38 Score=30.41 Aligned_cols=36 Identities=17% Similarity=0.219 Sum_probs=26.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++++|+|++. |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 17 ~~~~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 17 RGSHMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TTTCCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred cCCCCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 3446776654 5555543 5688999999999999876
No 163
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=35.60 E-value=82 Score=26.58 Aligned_cols=107 Identities=3% Similarity=-0.067 Sum_probs=0.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCC---CCCCCceEEEccCCCCCCCCCCCCCCCCHHHH
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNS---CNYPHFEFCSFSDDGFSETYQPSKVADDIPAL 89 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
+++||+++.+|..+-+.-++.-.+.= .+++|..+.+....... +...|+.+..++ .....+-...
T Consensus 4 ~~~riavl~SG~Gsnl~all~~~~~~--~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~----------~~~~~~r~~~ 71 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAIIGAIQKG--LAIEIRAVISNRADAYGLKRAQQADIPTHIIP----------HEEFPSRTDF 71 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHTT--CSEEEEEEEESCTTCHHHHHHHHTTCCEEECC----------GGGSSSHHHH
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHcC--CCCEEEEEEeCCcchHHHHHHHHcCCCEEEeC----------ccccCchhHh
Q ss_pred HHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEccc
Q 013836 90 LLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 90 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (435)
-..+.+.... .++|+||+-.+. .-...+-+.+.-.++-++++
T Consensus 72 d~~~~~~l~~------------------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 72 ESTLQKTIDH------------------YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp HHHHHHHHHT------------------TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred HHHHHHHHHh------------------cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
No 164
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=35.43 E-value=27 Score=30.04 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+|||.|+=.|..|- +||+.|.++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 468999999988874 589999999999998776
No 165
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=35.38 E-value=42 Score=30.24 Aligned_cols=33 Identities=15% Similarity=0.379 Sum_probs=27.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+.|||.|+=.|..| ..+|+.|.++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 45899999777767 6788999999999998865
No 166
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=35.15 E-value=37 Score=28.10 Aligned_cols=33 Identities=12% Similarity=0.137 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 565443 5556553 57899999999999998873
No 167
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=35.14 E-value=54 Score=28.34 Aligned_cols=44 Identities=7% Similarity=0.107 Sum_probs=29.8
Q ss_pred CCCCCCCCCEEEEEcCCCc--cChHHHHH-HHHHHHhCCCeEEEEeC
Q 013836 7 PCKLPRNGRRVILFPLPFQ--GHINPMLQ-LGSILYSEGFSITIIHT 50 (435)
Q Consensus 7 ~~~~~~~~~~il~~~~~~~--GHv~p~l~-La~~L~~rGH~Vt~~~~ 50 (435)
+...++.+|||+++....+ |.-.-+.. +++.|.+.|++|.++--
T Consensus 27 ~~~~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 27 RPAFSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCCCCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred hhhccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 4566777899998876554 44434433 56677778999988765
No 168
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=34.91 E-value=16 Score=32.88 Aligned_cols=32 Identities=13% Similarity=0.063 Sum_probs=24.8
Q ss_pred hhcCCccceEeeccCccchHHHHhh----CCCeeeccC
Q 013836 321 VLAHPAVGCFWTHSGWNSTLESICE----GIPMICQPY 354 (435)
Q Consensus 321 ll~~~~v~~~I~HGG~gs~~eal~~----GvP~v~~P~ 354 (435)
....+++ +|.-||-||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4445677 9999999999999865 899999885
No 169
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=34.77 E-value=1.2e+02 Score=24.80 Aligned_cols=38 Identities=5% Similarity=0.049 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
.+||+|+..++.. ..-+....+.|.+.|++|+++++..
T Consensus 23 ~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 23 SKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4789998886554 3445667788888999999999853
No 170
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=34.73 E-value=38 Score=28.19 Aligned_cols=33 Identities=6% Similarity=0.117 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||+++ |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 564443 5556553 57889999999999999763
No 171
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=34.66 E-value=29 Score=31.38 Aligned_cols=23 Identities=4% Similarity=0.132 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 013836 30 PMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 30 p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
.-.++|+++.++|++||+++.+.
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHHCCCEEEEEecCC
Confidence 45678999999999999999864
No 172
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=34.34 E-value=40 Score=28.97 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|.++++.++. -+ -.+++++|+++|++|+++.-
T Consensus 22 ~k~vlITGas~-gI--G~~la~~l~~~G~~V~~~~r 54 (251)
T 3orf_A 22 SKNILVLGGSG-AL--GAEVVKFFKSKSWNTISIDF 54 (251)
T ss_dssp CCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 36677775554 22 36889999999999988876
No 173
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=34.33 E-value=15 Score=32.27 Aligned_cols=54 Identities=15% Similarity=0.069 Sum_probs=39.0
Q ss_pred cCCccceEeeccCccchHHHHhh---CCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcC
Q 013836 323 AHPAVGCFWTHSGWNSTLESICE---GIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVK 394 (435)
Q Consensus 323 ~~~~v~~~I~HGG~gs~~eal~~---GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~ 394 (435)
..+++ +|.=||=||+.++++. ++|+++++... +|.-. .+.++++.+++++++++
T Consensus 40 ~~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G~------------~Gfl~----~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 40 VTADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAGR------------LGFLT----SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp BCCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESSS------------CCSSC----CBCGGGHHHHHHHHHTT
T ss_pred CCCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECCC------------CCccC----cCCHHHHHHHHHHHHcC
Confidence 35666 9999999999999887 88988887421 12111 24577888888888765
No 174
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=34.32 E-value=48 Score=25.92 Aligned_cols=35 Identities=17% Similarity=0.159 Sum_probs=28.1
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 17 VILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 17 il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.+++..+..-.+.+.+.+|...++.|++|+++.+-
T Consensus 11 ~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 11 SIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 33444455678889999999999999999999993
No 175
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=34.16 E-value=26 Score=29.90 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=22.2
Q ss_pred CCccEEEEcCchhh---HHHH----HHHcCCCeEEEccc
Q 013836 118 DSFACLITDAAWFI---ALSV----ANDFKLPTIVLLTD 149 (435)
Q Consensus 118 ~~~Dlvi~D~~~~~---~~~~----A~~~giP~v~~~~~ 149 (435)
.+||+|++|..... ...+ .-.+|+|+|.+.=.
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 47999999985533 3344 44458999997543
No 176
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=33.96 E-value=42 Score=29.89 Aligned_cols=39 Identities=10% Similarity=0.015 Sum_probs=31.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
+.|+|..-|+-|=-.-...||..|+++|++|.++-.+.+
T Consensus 42 ~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 80 (307)
T 3end_A 42 KVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPK 80 (307)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESSS
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 344555555568889999999999999999999988643
No 177
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=33.81 E-value=39 Score=29.26 Aligned_cols=46 Identities=13% Similarity=0.213 Sum_probs=31.7
Q ss_pred CCCCCCCCCEEEEEcCC--CccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 7 PCKLPRNGRRVILFPLP--FQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 7 ~~~~~~~~~~il~~~~~--~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
+...+.++++++.+..+ +.|=-.-...||..|+ +|++|.++-.+..
T Consensus 19 ~~~~~~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 19 PGSMDNKKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp -------CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred cccCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 33444457788777554 4488888999999999 9999999988643
No 178
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=33.78 E-value=40 Score=30.29 Aligned_cols=36 Identities=11% Similarity=0.243 Sum_probs=25.5
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.++|+|++. |+.|-+- ..|+++|.++||+|+.++-.
T Consensus 11 ~~~M~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 11 GAHVKYAVL--GATGLLG--HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp -CCCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEECT
T ss_pred ccCCEEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 345776655 5556543 56789999999999998763
No 179
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=33.70 E-value=12 Score=35.97 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+.|||+++=.|-.| ..||+.|.+.||+|+++-..
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 57999888665545 46899999999999999874
No 180
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=33.62 E-value=25 Score=32.40 Aligned_cols=34 Identities=12% Similarity=0.119 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.+|||.|+=.|..| ..+|..|++.||+|++....
T Consensus 28 ~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 46899999877776 46899999999999998874
No 181
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=33.58 E-value=93 Score=23.62 Aligned_cols=63 Identities=11% Similarity=-0.002 Sum_probs=37.0
Q ss_pred hCCCeeeccCCCchhHHHHHHHhhhc-cEEEeCCcCCHHHHHHHHHHHHcCCchHHH-HHHHHHHHHHHH
Q 013836 345 EGIPMICQPYFGDQMVNSRYVSHAWR-VGLQLEGKLERKEIERAILRVMVKADSQEM-RERATYLNEKVD 412 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~~~~~l~~~i~~vl~~~~~~~~-~~~a~~l~~~~~ 412 (435)
..+|+|++--..|... .....+ .| +---+.+.++.++|.++|++++.. ..+ ++..+.+++.+.
T Consensus 75 ~~~~ii~~s~~~~~~~-~~~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~---~~~~~~~~~~~~~~~~ 139 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTT-AMEAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQ---YDLVTSKEELLKKTFA 139 (151)
T ss_dssp SSCEEEEEECGGGHHH-HHHHHH-HTCCSEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHC--
T ss_pred CCcEEEEEECCCCHHH-HHHHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHh
Confidence 3667777665555433 334444 37 533344459999999999999987 343 344444444444
No 182
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=33.43 E-value=1.5e+02 Score=24.69 Aligned_cols=103 Identities=8% Similarity=-0.040 Sum_probs=56.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCC---CCCCCceEEEccCCCCCCCCCCCCCCCCHHHH
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLNSPNS---CNYPHFEFCSFSDDGFSETYQPSKVADDIPAL 89 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
+||+++.++..+- +.+|.+.+.+. +|+|..+.+....... +...|+.+..++ .. . ..+-
T Consensus 1 ~riaVl~SG~Gs~---L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~-~~---~------~~~r--- 64 (209)
T 1meo_A 1 ARVAVLISGTGSN---LQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVIN-HK---L------YKNR--- 64 (209)
T ss_dssp CEEEEEESSSCTT---HHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECC-GG---G------SSSH---
T ss_pred CeEEEEEECCchH---HHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEEC-cc---c------cCch---
Confidence 4788888766653 44455565554 7999888874422111 122466655544 10 0 0110
Q ss_pred HHHHHHhcchHHH-HHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEccc
Q 013836 90 LLSLNAKCIVPFR-DCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 90 ~~~~~~~~~~~l~-~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (435)
..+. ++++.+.+ .++|+||+-.+. .-...+-+.+...++-++++
T Consensus 65 ---------~~~~~~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 65 ---------VEFDSAIDLVLEE-------FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp ---------HHHHHHHHHHHHH-------TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---------hhhhHHHHHHHHh-------cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 1111 23344444 579999977653 44455666677777777664
No 183
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=33.25 E-value=28 Score=32.03 Aligned_cols=39 Identities=8% Similarity=0.018 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCCcc-C---hHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQG-H---INPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~G-H---v~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|+|.||+++..|..+ | +.....++++|.+.||+|+.+..
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 788899988654433 2 33455688999999999999865
No 184
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=33.19 E-value=18 Score=30.64 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=25.9
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|+.|||.|+=.|..| ..+++.|.++||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 346899988655545 4688999999999998555
No 185
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=33.18 E-value=92 Score=25.21 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=30.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.|+++||+|+..++.. ..-+....+.|.+.|++|+++++.
T Consensus 6 ~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 6 DLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 4667899999875553 445666778888899999999984
No 186
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=32.68 E-value=94 Score=26.21 Aligned_cols=115 Identities=12% Similarity=0.117 Sum_probs=67.5
Q ss_pred chhhhhhhcCCCCcEEEEEeccccCccccCCCchhhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhC
Q 013836 267 QSSISWLDKQAPRSVIYVSFGLARGAEWLEPLPKGILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEG 346 (435)
Q Consensus 267 ~~l~~~l~~~~~~~vV~vs~G~v~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~G 346 (435)
.++.++|.+...+=+|.++||-+ +|..+.+..+.+++=. |+++ .=...|...+..|+.+|
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~~i--------L~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~G 138 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFMRI--------LGPQFLSRFYGRTLNT----------HPAL--LPAFPGTHGVADALAYG 138 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECCSC--------CCHHHHHHHTTTEEEE----------ESSC--TTSSCSTTHHHHHHHHT
T ss_pred HHHHHHHHhhCCCEEEEcCchhh--------CCHHHHhhccCCeEEe----------Cccc--ccCCCCchHHHHHHHcC
Confidence 44778888766665565555422 5667766655544422 2222 22345889999999999
Q ss_pred CCeeeccCC--CchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q 013836 347 IPMICQPYF--GDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVKADSQEMRERATYLN 408 (435)
Q Consensus 347 vP~v~~P~~--~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~ 408 (435)
+...++-++ .+..|.+..+.+ ..+.+...-|.++|.+.+..+-. .-|.+..+.+.
T Consensus 139 ~~~tGvTvh~v~~~lD~G~Ii~Q---~~v~I~~~dt~~~L~~rl~~~~~----~ll~~~l~~~~ 195 (215)
T 3da8_A 139 VKVTGATVHLVDAGTDTGPILAQ---QPVPVLDGDDEETLHERIKVTER----RLLVAAVAALA 195 (215)
T ss_dssp CSEEEEEEEECCSSSSCSCEEEE---EEEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCCEEEE---EEeecCCCCCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 999877752 233343333322 22333336788888888765433 35555555443
No 187
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=32.50 E-value=55 Score=28.85 Aligned_cols=38 Identities=5% Similarity=-0.088 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCc-cChH---HHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQ-GHIN---PMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~-GHv~---p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+|||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478998875433 2222 3467999999999999998874
No 188
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=32.41 E-value=57 Score=23.64 Aligned_cols=47 Identities=2% Similarity=-0.041 Sum_probs=33.4
Q ss_pred hCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcC
Q 013836 345 EGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVK 394 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~ 394 (435)
..+|+|++ ..+.........+ .|+--.+.+.++.++|.++|++++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLK-AHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHST-TCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHH-hCcchheeCCCCHHHHHHHHHHHHcC
Confidence 46888888 4444555555556 47755555569999999999998864
No 189
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=32.41 E-value=29 Score=30.91 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|..|+|++. |+.|.+- ..|+++|.++||+|+++..
T Consensus 1 M~~~~ilVt--GatG~iG--~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 1 MAKQRVFIA--GHRGMVG--SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp -CCEEEEEE--TTTSHHH--HHHHHHHTTCTTEEEECCC
T ss_pred CCCCEEEEE--CCCcHHH--HHHHHHHHhCCCeEEEEec
Confidence 445676554 5666554 4578999999999887653
No 190
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=32.37 E-value=19 Score=32.07 Aligned_cols=32 Identities=13% Similarity=0.008 Sum_probs=26.0
Q ss_pred hhcCCccceEeeccCccchHHHHhh----CCCeeeccC
Q 013836 321 VLAHPAVGCFWTHSGWNSTLESICE----GIPMICQPY 354 (435)
Q Consensus 321 ll~~~~v~~~I~HGG~gs~~eal~~----GvP~v~~P~ 354 (435)
+-..+++ +|.=||=||+.+++.. ++|++.++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3345677 9999999999999854 889999984
No 191
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=32.25 E-value=45 Score=28.46 Aligned_cols=40 Identities=8% Similarity=0.141 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEcc
Q 013836 99 VPFRDCLANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLT 148 (435)
Q Consensus 99 ~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~ 148 (435)
......++++.+ .+.|+||.|. .+..+|+++|+|.+.+..
T Consensus 141 ee~~~~i~~l~~-------~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKA-------NGTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHH-------TTCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHH-------CCCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 455667788877 6799999985 357899999999998763
No 192
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=32.25 E-value=50 Score=27.83 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+|.++++.++.| + -.+++++|+++|++|+++.-
T Consensus 2 ~k~vlITGas~g-I--G~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG-I--GEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 577778765543 2 35789999999999988765
No 193
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=32.06 E-value=69 Score=24.55 Aligned_cols=47 Identities=4% Similarity=0.015 Sum_probs=34.7
Q ss_pred hCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHc
Q 013836 345 EGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMV 393 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~ 393 (435)
..+|+|++--..+... ..+..+ .|+---+.+.++.++|.++|+++++
T Consensus 86 ~~ipvI~lTa~~~~~~-~~~~~~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQ-IIEAAQ-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHH-HHHHHH-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHH-HHHHHH-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 4678888887766544 445555 4876666666999999999999875
No 194
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=31.77 E-value=61 Score=29.26 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=27.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
++|||+|+-.|.. .+...++|.++||+|..+.+.+.
T Consensus 3 ~mmrIvf~Gtp~f-----a~~~L~~L~~~~~~v~~Vvt~pd 38 (317)
T 3rfo_A 3 AMIKVVFMGTPDF-----SVPVLRRLIEDGYDVIGVVTQPD 38 (317)
T ss_dssp TTSEEEEECCSTT-----HHHHHHHHHHTTCEEEEEECCCC
T ss_pred CceEEEEEeCCHH-----HHHHHHHHHHCCCcEEEEEeCCC
Confidence 4599999876644 34567888889999999988543
No 195
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=31.70 E-value=27 Score=33.72 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=27.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+|++|+|.|+=.|..| ..+|+.|.++||+|+++..
T Consensus 2 ~m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 2 HMAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp -CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 3777899999776666 4578899999999988765
No 196
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=31.66 E-value=40 Score=26.78 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
..+++++.-|+ | +.|++++++.|.++|.+|+++ .
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g 56 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-H 56 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-E
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-E
Confidence 45788777544 4 999999999999999999999 5
No 197
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=31.65 E-value=36 Score=30.09 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=22.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++|+++ |+.|.+- ..|+++|.++||+|+.++-
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R 36 (308)
T 1qyc_A 5 SRILLI--GATGYIG--RHVAKASLDLGHPTFLLVR 36 (308)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECC
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEEC
Confidence 455443 5566654 4678999999999988765
No 198
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=31.61 E-value=54 Score=29.02 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCCccChHHH--HHHHHHHHhCC-CeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPM--LQLGSILYSEG-FSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~--l~La~~L~~rG-H~Vt~~~~~ 51 (435)
.++.|+|++. +..+|-.+. -.|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 3678999994 555897554 57788888888 999999874
No 199
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=31.59 E-value=41 Score=30.45 Aligned_cols=34 Identities=12% Similarity=0.049 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+|+|++. |+.|-+- ..|+++|.++||+|+.+.-.
T Consensus 25 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 25 PKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4666554 5666554 57889999999999998863
No 200
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=31.54 E-value=52 Score=28.57 Aligned_cols=37 Identities=11% Similarity=0.100 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+|.+.|+++++.++. -+ =.+++++|+++|++|+++..
T Consensus 22 ~m~~~k~vlITGas~-gI--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 22 SMSDTPVVLVTGGSR-GI--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp --CCSCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred hccCCCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 455678888886554 22 36889999999999988755
No 201
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.48 E-value=57 Score=28.16 Aligned_cols=32 Identities=16% Similarity=0.092 Sum_probs=24.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|.++++.++.| -=.+++++|+++|++|.++.-
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 67777765543 346789999999999988765
No 202
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=31.48 E-value=24 Score=34.05 Aligned_cols=40 Identities=13% Similarity=0.243 Sum_probs=27.6
Q ss_pred CCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 6 DPCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+-+++-|.|++|.|+=.|..| ..+|+.|+++||+|++...
T Consensus 7 ~~~~~~~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 7 HHHHHHMSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNR 46 (480)
T ss_dssp --------CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred cccccccCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 345677899999999887776 4689999999999998765
No 203
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=31.47 E-value=39 Score=30.29 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+.|||.|+=.|..| ..+|+.|+++||+|+++..
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 45899998665555 5789999999999998765
No 204
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=31.23 E-value=69 Score=28.49 Aligned_cols=34 Identities=15% Similarity=0.380 Sum_probs=26.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|.+ ||.|+=.|..|. ++|+.|.++||+|++.-.
T Consensus 3 ~Ms~-kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 3 AMSE-KIAFLGLGNLGT-----PIAEILLEAGYELVVWNR 36 (297)
T ss_dssp -CCC-EEEEECCSTTHH-----HHHHHHHHTTCEEEEC--
T ss_pred CCCC-cEEEEecHHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 4543 799998888874 689999999999998754
No 205
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=31.05 E-value=45 Score=30.09 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
++|||+|+-.+. ......++|.++||+|..+.+.+
T Consensus 2 ~~mrIvf~Gt~~-----fa~~~L~~L~~~~~~i~~Vvt~p 36 (314)
T 1fmt_A 2 ESLRIIFAGTPD-----FAARHLDALLSSGHNVVGVFTQP 36 (314)
T ss_dssp CCCEEEEEECSH-----HHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEeCC
Confidence 469999987643 33556678888899999888753
No 206
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=31.05 E-value=31 Score=31.84 Aligned_cols=31 Identities=23% Similarity=0.210 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|||+|+=-|-.| +.+|..|+++||+|+++--
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 788887544335 7788999999999999853
No 207
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=30.95 E-value=48 Score=29.02 Aligned_cols=37 Identities=11% Similarity=0.027 Sum_probs=25.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|.+.|+++++.++.| ==.++|++|+++|++|+++.-
T Consensus 20 ~m~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp -----CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3445678888866653 235789999999999988765
No 208
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=30.54 E-value=65 Score=24.41 Aligned_cols=39 Identities=13% Similarity=0.203 Sum_probs=20.4
Q ss_pred CCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 8 CKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 8 ~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
....+++++|+++- .|-.-...|.+.|.+.|++|+.+.+
T Consensus 8 ~~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 46 (143)
T 3m6m_D 8 HRARVRSMRMLVAD----DHEANRMVLQRLLEKAGHKVLCVNG 46 (143)
T ss_dssp -------CEEEEEC----SSHHHHHHHHHHHHC--CEEEEESS
T ss_pred cccccccceEEEEe----CCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 34455678988874 3555555667777777988876544
No 209
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=30.50 E-value=45 Score=29.98 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+|+| +++ |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 5 ~~~v-lVT-GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTI-LVT-GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEE-EEE-TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEE-EEe-cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 3454 444 4555443 5789999999999998865
No 210
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=30.46 E-value=54 Score=28.47 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|+++++.++. -+ =.+++++|+++|++|+++.-
T Consensus 21 ~k~~lVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 21 GRVALVTGGSR-GL--GFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 46677775443 33 35789999999999998865
No 211
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=30.32 E-value=64 Score=27.25 Aligned_cols=39 Identities=21% Similarity=0.247 Sum_probs=26.3
Q ss_pred CCCC-EEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGR-RVILFPLPFQGH----INPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~-~il~~~~~~~GH----v~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.++| +|.+++....+- ..-...|++.|+++|+.|+.-..
T Consensus 10 ~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg 53 (215)
T 2a33_A 10 KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGG 53 (215)
T ss_dssp CCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 3455 588886555542 23467888999999998876554
No 212
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=30.29 E-value=54 Score=28.20 Aligned_cols=36 Identities=19% Similarity=0.267 Sum_probs=24.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+++. |.++++. +.|-+ =.+++++|+++|++|+++.-
T Consensus 11 ~l~~-k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 11 PLEN-KVALVTA-STDGI--GLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp TTTT-CEEEESS-CSSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCC-CEEEEEC-CCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3443 4556664 44433 45789999999999998865
No 213
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=30.28 E-value=36 Score=31.42 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|++|+|.|+=.|..| ..+|+.|.++||+|+++..
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 346899999665555 4778999999999998865
No 214
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=30.19 E-value=32 Score=28.90 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=23.5
Q ss_pred CCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 10 LPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 10 ~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|++.|+|+|+=.|..| ..+++.|.+.||+|+++..
T Consensus 24 ~~~~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 24 VPDEAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp -----CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCCCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 34456899988543333 4578889999999998765
No 215
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=30.16 E-value=33 Score=31.04 Aligned_cols=34 Identities=9% Similarity=0.158 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+|+|++. |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 19 ~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 19 SHMILVT--GSAGRVG--RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp --CEEEE--TTTSHHH--HHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEE--CCCChHH--HHHHHHHHhCCCEEEEEeCC
Confidence 4565544 5666554 46789999999999998763
No 216
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=30.14 E-value=54 Score=26.45 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=30.1
Q ss_pred CCEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQ---GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~---GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
..+|+|+|.-+. -=..+...|++.|.++|.+|.|...|
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 367888874432 24678999999999999999999984
No 217
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=29.98 E-value=36 Score=29.65 Aligned_cols=40 Identities=25% Similarity=0.210 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 13 NGRRVILFPLPFQ---GHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 13 ~~~~il~~~~~~~---GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
++||..|++.|.- |-=.-.-+|+..|.+||++||.+--++
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDP 63 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEEC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCC
Confidence 4799999998854 555778899999999999999987754
No 218
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=29.80 E-value=45 Score=27.72 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||++. |+.|-+- ..|+++|.++||+|+.+.-.
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 565544 4455443 57899999999999999874
No 219
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=29.67 E-value=49 Score=27.87 Aligned_cols=38 Identities=21% Similarity=0.219 Sum_probs=28.6
Q ss_pred CCCEEEEEcCCCccChHHHH--HHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPML--QLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l--~La~~L~~rGH~Vt~~~~ 50 (435)
++|||++-+-.++.--+.++ .|.+.|.++||+|+=+++
T Consensus 2 ~~MkIaigsDha~~lK~~~i~~~l~~~L~~~G~eV~D~G~ 41 (214)
T 3ono_A 2 NAMKIALMMENSQAAKNAMVAGELNSVAGGLGHDVFNVGM 41 (214)
T ss_dssp CCCEEEECCCGGGGGGHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred CccEEEEECCCcHHHHChhHHHHHHHHHHHCCCEEEEcCC
Confidence 57899988766633333444 789999999999988775
No 220
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=29.65 E-value=62 Score=28.19 Aligned_cols=33 Identities=15% Similarity=0.039 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
-|+++++-++. -+ =.++|++|+++|++|+++.-
T Consensus 28 ~k~~lVTGas~-GI--G~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 28 KQVAIVTGASR-GI--GRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp TCEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 46778886554 22 35789999999999988765
No 221
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=29.63 E-value=74 Score=27.73 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=23.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|.++++-++ |-+ =.+++++|+++|++|+++.-
T Consensus 23 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGAT-SGI--GLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 567777544 322 35789999999999998765
No 222
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=29.63 E-value=65 Score=26.27 Aligned_cols=39 Identities=13% Similarity=0.193 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCccChHHHH-HHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPML-QLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l-~La~~L~~rGH~Vt~~~~ 50 (435)
|..|||+++-....|+..-+. .+++.|.+.|++|.++.-
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 555788877655567655433 456777778999998876
No 223
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=29.61 E-value=54 Score=32.45 Aligned_cols=39 Identities=10% Similarity=0.117 Sum_probs=36.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++.+|++.+.++..|-....-++..|..+|++|+.++..
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 578999999999999999999999999999999999884
No 224
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=29.60 E-value=11 Score=19.28 Aligned_cols=17 Identities=24% Similarity=0.603 Sum_probs=14.1
Q ss_pred CccchHHHHhhCCCeee
Q 013836 335 GWNSTLESICEGIPMIC 351 (435)
Q Consensus 335 G~gs~~eal~~GvP~v~ 351 (435)
|.|++...++.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888999988765
No 225
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=29.56 E-value=62 Score=27.15 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=27.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+..|++ ..|..|+..-+..+++.|.++|++|..+--
T Consensus 11 ~~~~vvl-lHG~~~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 11 VKKHFVL-VHAAFHGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CCCEEEE-ECCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCCeEEE-ECCCCCCcchHHHHHHHHHhcCCeEEEecc
Confidence 3444444 456667777788999999999999887765
No 226
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=29.50 E-value=32 Score=26.48 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+.||+++=.|..| ..+++.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4677777554334 57899999999999999985
No 227
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=29.50 E-value=1.2e+02 Score=27.67 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.|+|++. |+.|-+- ..|+++|.++||+|+.+.-.
T Consensus 29 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISIT--GAGGFIA--SHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEE--CCccHHH--HHHHHHHHHCCCeEEEEECC
Confidence 4565544 5555443 56789999999999998763
No 228
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=29.50 E-value=39 Score=29.81 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEG-FSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rG-H~Vt~~~~~ 51 (435)
++|++ + |+.|.+- ..|+++|.++| |+|+.++-.
T Consensus 6 ~~ilV-t-GatG~iG--~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 6 KLVVV-F-GGTGAQG--GSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp CEEEE-E-TTTSHHH--HHHHHHHHHHCSSEEEEEESC
T ss_pred CEEEE-E-CCCchHH--HHHHHHHHhcCCceEEEEEcC
Confidence 45444 3 5666553 56789999999 999998763
No 229
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=29.49 E-value=46 Score=29.86 Aligned_cols=35 Identities=17% Similarity=0.381 Sum_probs=24.0
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|+.|+|++. |+.|.+- ..|+++|.++||+|+.+.-
T Consensus 1 m~~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADR 35 (345)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEEC
Confidence 345666554 5555543 5678999999999998875
No 230
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=29.49 E-value=46 Score=30.18 Aligned_cols=36 Identities=22% Similarity=0.189 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|+.|+|++. |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 7 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 7 WQGKRVFVT--GHTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp HTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred hCCCEEEEE--CCCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 445676554 5666554 46789999999999998763
No 231
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=29.46 E-value=90 Score=28.12 Aligned_cols=38 Identities=3% Similarity=-0.004 Sum_probs=26.2
Q ss_pred HHHHHhccCCcCCCCccEEEEcCchhhHHHHHHHcCCCeEEEccc
Q 013836 105 LANKLMSNAQESKDSFACLITDAAWFIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 105 l~~l~~~~~~~~~~~~Dlvi~D~~~~~~~~~A~~~giP~v~~~~~ 149 (435)
++.+.. -+||+||..........--++.|||++.+...
T Consensus 109 ~E~i~a-------l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 109 TEACVA-------ATPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp HHHHHH-------TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHh-------cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 566666 68999998754333334446789999987644
No 232
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=29.42 E-value=67 Score=26.52 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=30.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+..++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3557777778888888899999999999998877765
No 233
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=29.37 E-value=37 Score=29.77 Aligned_cols=31 Identities=10% Similarity=0.050 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|||+|+=.|..| ..+|..|.++||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEc
Confidence 578877665555 3688999999999999866
No 234
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=29.12 E-value=49 Score=28.80 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||++. |+ |.+- ..|+++|.++||+|+.++-.
T Consensus 6 ~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSF--GH-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEE--TC-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEE--CC-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 677666 45 6554 46789999999999999863
No 235
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=29.11 E-value=23 Score=29.80 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||+++=. |.+ -..+++.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 56666643 432 457899999999999999874
No 236
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=29.01 E-value=56 Score=29.07 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|+|+++ |+.|.+- ..|+++|.++||+|++++-.
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 5 EKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECC
T ss_pred cEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECC
Confidence 455544 5667664 46789999999999998763
No 237
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=28.44 E-value=1e+02 Score=24.74 Aligned_cols=41 Identities=10% Similarity=0.033 Sum_probs=30.6
Q ss_pred CCCCCCEEEEEcCCCc-cChH--HHHHHHHHHHhCCCeEEEEeC
Q 013836 10 LPRNGRRVILFPLPFQ-GHIN--PMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 10 ~~~~~~~il~~~~~~~-GHv~--p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+.+++++.+++.+.. |.+. -.--|++.|.+.|++|.....
T Consensus 6 ~~~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~i 49 (172)
T 1mkz_A 6 TEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAI 49 (172)
T ss_dssp SSCCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEE
Confidence 4467899999999876 5432 233488999999999987554
No 238
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=28.35 E-value=85 Score=26.72 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=26.3
Q ss_pred cCCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 4 QQDPCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 4 ~~~~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
..++...+++. |.++++-++ |-+ =.+++++|+++|++|+++.-
T Consensus 5 ~~~~~~~~l~~-k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 47 (247)
T 1uzm_A 5 ATEGAKPPFVS-RSVLVTGGN-RGI--GLAIAQRLAADGHKVAVTHR 47 (247)
T ss_dssp ----CCCCCCC-CEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCcccccCCC-CEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 34444555544 455666444 433 35788999999999998865
No 239
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=28.33 E-value=54 Score=29.54 Aligned_cols=35 Identities=17% Similarity=0.436 Sum_probs=24.2
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+++|+|++. |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 25 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILIT--GGAGFVG--SHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEE--cCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 445666554 5556443 5678999999999999875
No 240
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=28.28 E-value=63 Score=27.40 Aligned_cols=35 Identities=9% Similarity=-0.028 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+.|.++++-++. -+ =.+++++|+++|++|+++.-
T Consensus 5 ~~~k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 5 GEARRVLVYGGRG-AL--GSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp -CCCEEEEETTTS-HH--HHHHHHHHHTTTCEEEEEES
T ss_pred CCCCEEEEECCCc-HH--HHHHHHHHHhCCCEEEEEeC
Confidence 3455667775443 23 35789999999999998876
No 241
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=28.25 E-value=49 Score=25.69 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=28.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
..+++++.-|+ =+.|++++++.|.++|.+|+++ .
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g 51 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-H 51 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-E
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-E
Confidence 35787777443 4899999999999999999999 5
No 242
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=27.95 E-value=25 Score=27.17 Aligned_cols=62 Identities=13% Similarity=0.112 Sum_probs=37.1
Q ss_pred hCCCeeeccCCCchhHHHHHHHhhhc-cEEEeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Q 013836 345 EGIPMICQPYFGDQMVNSRYVSHAWR-VGLQLEGKLERKEIERAILRVMVKADSQEMRERATYLNEKV 411 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~ 411 (435)
..+|+|++--..+. .......+ .| +--.+.+.++.++|.++|++++.. ..+++..+++.+.+
T Consensus 78 ~~~~ii~ls~~~~~-~~~~~~~~-~g~~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~ 140 (154)
T 2rjn_A 78 PDIERVVISGYADA-QATIDAVN-RGKISRFLLKPWEDEDVFKVVEKGLQL---AFLREENLRLQEET 140 (154)
T ss_dssp TTSEEEEEECGGGH-HHHHHHHH-TTCCSEEEESSCCHHHHHHHHHHHHHH---HHHHHHTTSCCC--
T ss_pred CCCcEEEEecCCCH-HHHHHHHh-ccchheeeeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 36787777655553 33344444 35 533444459999999999999887 55555444443333
No 243
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=27.90 E-value=1.2e+02 Score=25.45 Aligned_cols=112 Identities=10% Similarity=0.104 Sum_probs=61.9
Q ss_pred hhhhhhcCCCCcEEEEEeccccCccccCCCchhhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCC
Q 013836 269 SISWLDKQAPRSVIYVSFGLARGAEWLEPLPKGILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIP 348 (435)
Q Consensus 269 l~~~l~~~~~~~vV~vs~G~v~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP 348 (435)
+.++|.....+=+|.++|| .- +|..+.+..+.+++-. |+++ .=-..|...+..|+.+|..
T Consensus 71 ~~~~l~~~~~Dliv~a~y~--~i------l~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~G~~ 130 (209)
T 1meo_A 71 IDLVLEEFSIDIVCLAGFM--RI------LSGPFVQKWNGKMLNI----------HPSL--LPSFKGSNAHEQALETGVT 130 (209)
T ss_dssp HHHHHHHTTCCEEEEESCC--SC------CCHHHHHHTTTSEEEE----------ESSS--TTSSCSSCHHHHHHHHTCS
T ss_pred HHHHHHhcCCCEEEEcchh--hh------CCHHHHhhhcCCEEEE----------ccCc--CcCCCCccHHHHHHHcCCC
Confidence 5666766555544444443 22 5666665554444322 2332 2234688999999999999
Q ss_pred eeeccC--CCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 013836 349 MICQPY--FGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVKADSQEMRERATYL 407 (435)
Q Consensus 349 ~v~~P~--~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 407 (435)
..++-+ ..+..|.+..+.+ .-+.+...-|.++|.+.+..+-. .-|.+..+.+
T Consensus 131 ~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~~~dt~~~L~~rl~~~~~----~ll~~~l~~~ 184 (209)
T 1meo_A 131 VTGCTVHFVAEDVDAGQIILQ---EAVPVKRGDTVATLSERVKLAEH----KIFPAALQLV 184 (209)
T ss_dssp EEEEEEEECCC---CCCEEEE---EEEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred cEEEEEEEECCCCcCCCEEEE---EEEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 877775 3344444433333 12333335788888887765533 3555555444
No 244
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=27.87 E-value=61 Score=24.50 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=25.4
Q ss_pred HHHHHHHHHhccCCcCCCCccEEEEcCch--hhHHHHHH---HcCCCeEEEc
Q 013836 101 FRDCLANKLMSNAQESKDSFACLITDAAW--FIALSVAN---DFKLPTIVLL 147 (435)
Q Consensus 101 l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~--~~~~~~A~---~~giP~v~~~ 147 (435)
-.+.++.+.+ .+||+||.|... ..+..+++ ..++|.|.++
T Consensus 42 g~eAl~~~~~-------~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 42 MQEALDIARK-------GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHHH-------CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHHh-------CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 4456666665 689999999743 33344443 3578876643
No 245
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=27.81 E-value=31 Score=30.66 Aligned_cols=39 Identities=15% Similarity=0.047 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCCcc----ChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQG----HINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~G----Hv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++|||+++..+..+ -+.....++++|.++||+|..+...
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 47899999855332 2345678899999999999998873
No 246
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=27.75 E-value=78 Score=19.98 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 013836 397 SQEMRERATYLNEKVDICLQQGGSSYQSLGRLTDHI 432 (435)
Q Consensus 397 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 432 (435)
|.+++++...++.++++ -|++..-+..++..|
T Consensus 4 waefkqrlaaiktrlqa----lggseaelaafekei 35 (73)
T 2a3d_A 4 WAEFKQRLAAIKTRLQA----LGGSEAELAAFEKEI 35 (73)
T ss_dssp HHHHHHHHHHHHHHHHH----CSSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----hcCcHHHHHHHHHHH
Confidence 56888999888888884 556666566665554
No 247
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=27.70 E-value=41 Score=30.30 Aligned_cols=32 Identities=13% Similarity=0.322 Sum_probs=26.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||+++=.|+.| ..+|..|.+.||+|+++...
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 789999777666 35788999999999999873
No 248
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=27.70 E-value=45 Score=29.88 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||+++=.|+.| ..+|..|.++||+|+++...
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcC
Confidence 789999888777 35688999999999999873
No 249
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=27.64 E-value=49 Score=24.87 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=26.8
Q ss_pred CEEEEEcCCCccCh--HHHHHHHHHHHhCC--CeEEEEeC
Q 013836 15 RRVILFPLPFQGHI--NPMLQLGSILYSEG--FSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv--~p~l~La~~L~~rG--H~Vt~~~~ 50 (435)
||++|+-.-..-.. +..+.+|....++| |+|.++..
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~ 47 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILW 47 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEEC
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 78887766543222 34677899999999 89999988
No 250
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=27.64 E-value=49 Score=27.86 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
||.++++.++. -+ =.+++++|+++|++|.++.-
T Consensus 1 Mk~vlVTGas~-gI--G~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGASS-GL--GAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTTS-HH--HHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCCc-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 56677775554 22 35789999999999988876
No 251
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=27.42 E-value=56 Score=28.16 Aligned_cols=39 Identities=15% Similarity=0.171 Sum_probs=22.9
Q ss_pred CCCCEEEEEcCCCccC-hHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGH-INPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GH-v~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|++++++++.- -.-+ ..-+=.....++++|++|++++-.
T Consensus 1 ~~~~~vL~v~a-HPDDe~l~~Ggtia~~~~~G~~V~vv~lT 40 (242)
T 2ixd_A 1 MSGLHILAFGA-HADDVEIGMAGTIAKYTKQGYEVGICDLT 40 (242)
T ss_dssp -CCCSEEEEES-STTHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCccEEEEEe-CCChHHHhHHHHHHHHHHCCCeEEEEEEc
Confidence 45566665542 2222 333445556677899999888764
No 252
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=27.37 E-value=43 Score=31.07 Aligned_cols=35 Identities=17% Similarity=0.370 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|++|+|+++=.|. --+..|..|.++||+|+++--.
T Consensus 1 m~~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 4568888876553 3467899999999999999873
No 253
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=26.84 E-value=40 Score=31.40 Aligned_cols=42 Identities=7% Similarity=0.000 Sum_probs=30.3
Q ss_pred CCCCCCEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 10 LPRNGRRVILFPLPFQGH----INPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 10 ~~~~~~~il~~~~~~~GH----v~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
..|+||||+++..|..+- +.....++++|.+.||+|+.+..+
T Consensus 33 ~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 78 (383)
T 3k3p_A 33 GSMSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFIT 78 (383)
T ss_dssp ----CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred ccccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEec
Confidence 457789999998665544 356777888888889999999874
No 254
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=26.79 E-value=73 Score=26.43 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILY-SEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~-~rGH~Vt~~~~~ 51 (435)
||.++++ |+.|-+ =..++++|. ++||+|+.+.-.
T Consensus 5 mk~vlVt-Gasg~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITIL-GAAGQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEE-STTSHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEE-eCCcHH--HHHHHHHHHhcCCceEEEEecC
Confidence 5655555 444443 367889999 899999998763
No 255
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=26.73 E-value=2.2e+02 Score=25.34 Aligned_cols=105 Identities=9% Similarity=0.088 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCC-CCCCCCCCCceEEEccCCCCCCCCCCCCCCCCHHHH
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHTTLN-SPNSCNYPHFEFCSFSDDGFSETYQPSKVADDIPAL 89 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
+++||+++.++. || .+.+|..+-.+- +.+|..+.+... ....+...|+.+..++ ... . .. .
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~~~~~-~~~--~-------~r-~-- 167 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPYYHVP-VDP--K-------DK-E-- 167 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCEEECC-CCS--S-------CC-H--
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCEEEcC-CCc--C-------CH-H--
Confidence 468999988765 55 466666665443 578888877432 2122334688887776 210 0 00 0
Q ss_pred HHHHHHhcchHHHHHHHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEccc
Q 013836 90 LLSLNAKCIVPFRDCLANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 90 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~~ 149 (435)
... .++++.+.+ .++|+||+-.+. .-...+-+.+.-.++-++++
T Consensus 168 ------~~~---~~~~~~l~~-------~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 168 ------PAF---AEVSRLVGH-------HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ------HHH---HHHHHHHHH-------TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ------HHH---HHHHHHHHH-------hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 001 123444444 579999987653 44455666666667766654
No 256
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=26.68 E-value=70 Score=28.85 Aligned_cols=35 Identities=9% Similarity=0.098 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLN 53 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~ 53 (435)
+|||+|+-.+..+ +...++|.++||+|..+.+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPD 36 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCC
Confidence 5899998766443 4567888899999998888544
No 257
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=26.57 E-value=73 Score=28.28 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIH 49 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~ 49 (435)
|++|||+++... .....+.+.|.+.||+|.+..
T Consensus 5 ~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 678999888532 356677899999999998764
No 258
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=26.55 E-value=51 Score=28.26 Aligned_cols=37 Identities=19% Similarity=0.207 Sum_probs=26.0
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 9 KLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
......+||.|+=.|..| ..+|+.|+++||+|++...
T Consensus 14 ~~~~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp -----CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred ccccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 334557999999655544 4678999999999998866
No 259
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=26.43 E-value=42 Score=28.07 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=26.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
..+++..|..++..-+..+++.|.++|++|..+--
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~ 39 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVEL 39 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECC
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecC
Confidence 34455556667777788999999999999887765
No 260
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=26.29 E-value=39 Score=30.70 Aligned_cols=45 Identities=16% Similarity=0.084 Sum_probs=24.5
Q ss_pred CCccCCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 1 METQQDPCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 1 ~~~~~~~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|.+...|....|.+.+|+++=.|..| +..|..|+++|++|+++-.
T Consensus 1 M~~~~~p~~~~~~~~dvvIIG~G~aG-----l~aA~~l~~~g~~v~lie~ 45 (360)
T 3ab1_A 1 MLDIHNPATDHHDMRDLTIIGGGPTG-----IFAAFQCGMNNISCRIIES 45 (360)
T ss_dssp ------------CCEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCcccCCccccCCCCCEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 55555565555556778877554333 5677888889999999976
No 261
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=26.24 E-value=83 Score=23.07 Aligned_cols=37 Identities=11% Similarity=-0.031 Sum_probs=29.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|||+++|..+.|+-.-.-.+-+.+.++|.++.+-..
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 3889999999888876666777888888988765444
No 262
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=26.21 E-value=94 Score=25.62 Aligned_cols=36 Identities=8% Similarity=0.105 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGH----INPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GH----v~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+|+|.+++... +. ..-...|++.|+++|+.|+.-..
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG 52 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGG 52 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 58999998654 33 34467888999999998776654
No 263
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.18 E-value=81 Score=26.64 Aligned_cols=38 Identities=13% Similarity=0.194 Sum_probs=26.0
Q ss_pred CCC-EEEEEcCCCcc----ChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGR-RVILFPLPFQG----HINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~-~il~~~~~~~G----Hv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++| +|.+++....+ +..-...|++.|+++|+.|+.-..
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 445 58888654443 234578888999999998865554
No 264
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=26.00 E-value=85 Score=25.74 Aligned_cols=37 Identities=19% Similarity=0.122 Sum_probs=29.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+..++++..|..|.-.-+..+++.|.++|+.|..+-.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 3456666667778888899999999999999887765
No 265
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=25.86 E-value=70 Score=27.26 Aligned_cols=33 Identities=18% Similarity=0.088 Sum_probs=23.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
||.++++.++ |-+ =.+++++|+++|++|+++.-
T Consensus 1 mk~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCA-TGI--GAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 4666777544 322 35789999999999998765
No 266
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=25.86 E-value=70 Score=28.18 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++|||.|+=.|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 358999997666664 468889999999987654
No 267
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=25.78 E-value=39 Score=30.04 Aligned_cols=32 Identities=9% Similarity=0.010 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+|||.|+=.|..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 57999997777663 679999999999998865
No 268
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=25.72 E-value=88 Score=26.94 Aligned_cols=32 Identities=16% Similarity=0.155 Sum_probs=23.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|.++++.++ |-+ =.+++++|+++|++|+++.-
T Consensus 8 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVTGAA-QGI--GRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CcH--HHHHHHHHHHCCCEEEEEEC
Confidence 556666444 322 35789999999999998865
No 269
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=25.64 E-value=1e+02 Score=26.65 Aligned_cols=52 Identities=8% Similarity=0.016 Sum_probs=32.6
Q ss_pred CEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCceEEEcc
Q 013836 15 RRVILFPLPFQGHINP-MLQLGSILYSEGFSITIIHTTLNSPNSC----NYPHFEFCSFS 69 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p-~l~La~~L~~rGH~Vt~~~~~~~~~~~~----~~~~~~~~~~~ 69 (435)
||||+.--=+. .-| +..|+++|.+.| +|+++.|..+..-.. -..-+++..++
T Consensus 1 M~ILlTNDDGi--~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~ 57 (244)
T 2e6c_A 1 MRILVTNDDGI--YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHP 57 (244)
T ss_dssp CEEEEECSSCT--TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECC
T ss_pred CeEEEEcCCCC--CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEec
Confidence 56666654333 334 778899998888 899999975542221 11335666655
No 270
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=25.63 E-value=62 Score=28.89 Aligned_cols=39 Identities=13% Similarity=0.218 Sum_probs=24.4
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 9 KLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+.+...|+|++. |+.|-+- ..|+++|.++||+|+.+.-.
T Consensus 9 ~~~~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 9 HHGSMTRSALVT--GITGQDG--AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ------CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cccccCCeEEEE--CCCChHH--HHHHHHHHHCCCeEEEEeCC
Confidence 344445776554 5556553 56889999999999998763
No 271
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=25.57 E-value=38 Score=30.19 Aligned_cols=33 Identities=15% Similarity=0.016 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++|||.|+=.|..| ..+|+.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 46899999666555 4688999999999998865
No 272
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=25.44 E-value=66 Score=27.39 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=27.5
Q ss_pred CccceEeeccCccchHHHHhhCCCeeeccCCCchhHHH
Q 013836 325 PAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNS 362 (435)
Q Consensus 325 ~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na 362 (435)
+++ +|+.||-......- .++|+|-++...--...|
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~a 98 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQF 98 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCHHHHHHH
Confidence 666 99999999999975 689999999865434433
No 273
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=25.39 E-value=1.2e+02 Score=22.03 Aligned_cols=47 Identities=9% Similarity=0.130 Sum_probs=33.5
Q ss_pred hCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHc
Q 013836 345 EGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMV 393 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~ 393 (435)
..+|+|++--..+. ....+..+ .|+---+.+.++.++|.++|+++++
T Consensus 75 ~~~pii~~s~~~~~-~~~~~~~~-~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGGE-EDESLALS-LGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCSH-HHHHHHHH-TTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCch-HHHHHHHh-cChhhhccCCCCHHHHHHHHHHHhc
Confidence 35788887766554 34445555 4776666666999999999999875
No 274
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=25.34 E-value=70 Score=27.38 Aligned_cols=36 Identities=8% Similarity=-0.005 Sum_probs=25.2
Q ss_pred HHHHHhccCCcCCCCccEEEEcCchh--hHHHHHHHcCCCeEEEc
Q 013836 105 LANKLMSNAQESKDSFACLITDAAWF--IALSVANDFKLPTIVLL 147 (435)
Q Consensus 105 l~~l~~~~~~~~~~~~Dlvi~D~~~~--~~~~~A~~~giP~v~~~ 147 (435)
++++.. -+||+||...... ....--+..|||++.+.
T Consensus 52 ~E~i~~-------l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 52 AEGILA-------MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHHT-------TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHc-------cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 566666 6899999886542 23344467899999874
No 275
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=25.25 E-value=58 Score=28.62 Aligned_cols=32 Identities=9% Similarity=0.121 Sum_probs=23.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++|+++ |+.|.+- ..|+++|.++||+|+.++-
T Consensus 3 ~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R 34 (307)
T 2gas_A 3 NKILIL--GPTGAIG--RHIVWASIKAGNPTYALVR 34 (307)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEEC
T ss_pred cEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEEC
Confidence 455443 5666664 4678999999999998876
No 276
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=25.24 E-value=1.5e+02 Score=22.49 Aligned_cols=46 Identities=9% Similarity=0.117 Sum_probs=0.0
Q ss_pred CCccCCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 1 METQQDPCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 1 ~~~~~~~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|.....+.....++++|+++ ..+-.-...|.+.|.+.|++|..+.+
T Consensus 1 m~~~~~~~~~~~~~~~ILiv----dd~~~~~~~l~~~L~~~g~~v~~~~~ 46 (153)
T 3hv2_A 1 MSLGELNVATVTRRPEILLV----DSQEVILQRLQQLLSPLPYTLHFARD 46 (153)
T ss_dssp -----CCCCCCCSCCEEEEE----CSCHHHHHHHHHHHTTSSCEEEEESS
T ss_pred CCccccchhhccCCceEEEE----CCCHHHHHHHHHHhcccCcEEEEECC
No 277
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=25.14 E-value=47 Score=28.84 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=25.6
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 18 ILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 18 l~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+++..|..|+-.-+..+++.|+++|++|..+--
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl 86 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPRL 86 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 445577778877788999999999999875443
No 278
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=25.12 E-value=69 Score=27.46 Aligned_cols=32 Identities=19% Similarity=0.054 Sum_probs=22.3
Q ss_pred CCccEEEEcCch-------hhHHHHHHHcCCCeEEEccc
Q 013836 118 DSFACLITDAAW-------FIALSVANDFKLPTIVLLTD 149 (435)
Q Consensus 118 ~~~Dlvi~D~~~-------~~~~~~A~~~giP~v~~~~~ 149 (435)
.+||+|++|... .-+..+.-.+|+|+|.+.=.
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 144 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKN 144 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESS
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeecc
Confidence 579999999743 22344556678999997543
No 279
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=25.06 E-value=64 Score=29.39 Aligned_cols=34 Identities=9% Similarity=0.095 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++|+|+++ |+.|.+- ..|+++|.++||+|+.++-
T Consensus 4 ~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R 37 (352)
T 1xgk_A 4 QKKTIAVV--GATGRQG--ASLIRVAAAVGHHVRAQVH 37 (352)
T ss_dssp CCCCEEEE--STTSHHH--HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEE--CCCCHHH--HHHHHHHHhCCCEEEEEEC
Confidence 35666554 5666554 4678999999999999875
No 280
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=25.06 E-value=39 Score=32.82 Aligned_cols=34 Identities=9% Similarity=0.273 Sum_probs=27.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+|.||+|+=.|.-| +.+|+.|.++|++||++...
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 46799998755445 57889999999999999874
No 281
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=25.05 E-value=77 Score=25.45 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQ---GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~---GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
..+|+|+|.-+. --.++...|++.|.++|.+|.|..+|
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 357777774332 34678999999999999999999984
No 282
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=25.03 E-value=78 Score=27.17 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|.++++-++.| ==.+++++|+++|++|+++.-
T Consensus 21 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 53 (253)
T 2nm0_A 21 SRSVLVTGGNRG---IGLAIARAFADAGDKVAITYR 53 (253)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 456677755442 235789999999999988865
No 283
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=25.02 E-value=49 Score=31.61 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|||.++=.|..| ..+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 789888555444 57899999999999988764
No 284
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=24.88 E-value=65 Score=29.87 Aligned_cols=34 Identities=12% Similarity=0.045 Sum_probs=26.6
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|+.+||+++-.+.. .+.+++++.+.|++|+++..
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~ 38 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTM 38 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEEC
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcC
Confidence 35688988876643 36789999999999999965
No 285
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=24.78 E-value=46 Score=29.57 Aligned_cols=32 Identities=9% Similarity=0.266 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+||.|+=.|..|+ .+|..|+++||+|+++..
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 46788887766665 578899999999998866
No 286
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=24.61 E-value=56 Score=29.73 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=24.7
Q ss_pred HHHHHhccCCcCCCCccEEEEcCchh-hHHHHHHHcCCCeEEEcc
Q 013836 105 LANKLMSNAQESKDSFACLITDAAWF-IALSVANDFKLPTIVLLT 148 (435)
Q Consensus 105 l~~l~~~~~~~~~~~~Dlvi~D~~~~-~~~~~A~~~giP~v~~~~ 148 (435)
++++.. -+||+||...... ....+.+.+|||++.+..
T Consensus 89 ~E~Ila-------l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 89 LESLIT-------LQPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp HHHHHH-------HCCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred HHHHhc-------CCCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 455655 4799999875432 223456778999998753
No 287
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=24.53 E-value=80 Score=25.47 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQ---GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~---GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
..+|+|+|.-+. --.++...|++.|.++|.+|.|..+|
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 357777774332 24678999999999999999999984
No 288
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=24.49 E-value=69 Score=28.66 Aligned_cols=36 Identities=11% Similarity=0.199 Sum_probs=28.7
Q ss_pred CEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINP-MLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p-~l~La~~L~~rGH~Vt~~~~ 50 (435)
+||+++..+..++... ...+.+.|.++|++|.+..+
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 5799999998876544 66788999999999988655
No 289
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=24.48 E-value=50 Score=30.64 Aligned_cols=40 Identities=13% Similarity=0.143 Sum_probs=26.0
Q ss_pred CCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 6 DPCKLPRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+....+++++|+|+=-|-.| +.+|..|+++|++|+++--
T Consensus 15 ~~~~~~~~~~dV~IVGaG~aG-----l~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 15 GENLYFQGHMKAIVIGAGIGG-----LSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp --------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCcccCCCCCEEEEECCCHHH-----HHHHHHHHhCCCCEEEEeC
Confidence 334444557899988654334 7789999999999999976
No 290
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=24.43 E-value=76 Score=27.24 Aligned_cols=34 Identities=21% Similarity=0.192 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++|.++++.++. -+ =.+++++|+++|++|+++..
T Consensus 6 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcC
Confidence 467788885554 22 35889999999999998865
No 291
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=24.17 E-value=1.5e+02 Score=21.64 Aligned_cols=47 Identities=13% Similarity=0.050 Sum_probs=33.3
Q ss_pred CCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcC
Q 013836 346 GIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVK 394 (435)
Q Consensus 346 GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~ 394 (435)
.+|+|++--..+... ..+..+ .|+---+.+.++.++|.++|++++..
T Consensus 81 ~~pii~~s~~~~~~~-~~~~~~-~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 81 EIPIIMITAEGGKAE-VITALK-AGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp TCCEEEEESCCSHHH-HHHHHH-HTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred CCeEEEEeCCCChHH-HHHHHH-cCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 578888776665443 334445 47765555569999999999999865
No 292
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=23.98 E-value=73 Score=27.33 Aligned_cols=35 Identities=14% Similarity=-0.050 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC---CeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEG---FSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rG---H~Vt~~~~~ 51 (435)
+++.++++.+ .|-+ -..++++|+++| ++|+++.-.
T Consensus 20 ~~k~vlITGa-sggI--G~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 20 HMNSILITGC-NRGL--GLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CCSEEEESCC-SSHH--HHHHHHHHHTSSSCCSEEEEEESC
T ss_pred CCCEEEEECC-CCcH--HHHHHHHHHhcCCCCcEEEEEecC
Confidence 4666777744 4433 367899999999 999998763
No 293
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=23.95 E-value=61 Score=28.68 Aligned_cols=32 Identities=13% Similarity=0.350 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|||.|+=.|..|. .+|+.|.++||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 47899997766664 678999999999998865
No 294
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=23.89 E-value=52 Score=29.65 Aligned_cols=32 Identities=13% Similarity=0.343 Sum_probs=22.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~ 50 (435)
|+| +++ |+.|.+- ..|+++|.++ ||+|+.+.-
T Consensus 5 ~~v-lVT-GatG~iG--~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNI-IVT-GGAGFIG--SNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp SEE-EEE-TTTSHHH--HHHHHHHHHHCTTCEEEEEEC
T ss_pred cEE-EEe-CCccHHH--HHHHHHHHHhCCCCEEEEEeC
Confidence 444 444 5556443 4678899998 899998876
No 295
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=23.79 E-value=1.4e+02 Score=25.76 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=26.8
Q ss_pred CEEEEEcCCCc----------cC-hHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQ----------GH-INPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~----------GH-v~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+||+++..... |- ..=++.-...|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57887766532 22 344666778999999999999983
No 296
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=23.74 E-value=70 Score=27.40 Aligned_cols=33 Identities=6% Similarity=-0.078 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
||.++++-++. -+ =.+++++|+++|++|+++.-
T Consensus 1 Mk~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKH-FG--GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTS-TT--HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCc-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 56777775544 33 35789999999999887654
No 297
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=23.74 E-value=39 Score=30.58 Aligned_cols=31 Identities=10% Similarity=0.013 Sum_probs=25.8
Q ss_pred hhhhcCCccceEeeccCccchHHHHhhCCCeeec
Q 013836 319 QQVLAHPAVGCFWTHSGWNSTLESICEGIPMICQ 352 (435)
Q Consensus 319 ~~ll~~~~v~~~I~HGG~gs~~eal~~GvP~v~~ 352 (435)
.+++.++++ +|+.- .|+++.|.+.|+|+|++
T Consensus 256 ~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 256 VILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 378899999 99863 56678899999999886
No 298
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=23.71 E-value=52 Score=28.72 Aligned_cols=34 Identities=6% Similarity=0.145 Sum_probs=23.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
..++|++. |+.|-+ -..|+++|.++||+|+.+.-
T Consensus 11 ~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 11 HHMKILIT--GANGQL--GREIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp -CEEEEEE--STTSHH--HHHHHHHHTTSSEEEEEECT
T ss_pred ccceEEEE--CCCChH--HHHHHHHHHhCCCeEEeccC
Confidence 34666554 455654 35678999999999998765
No 299
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=23.67 E-value=43 Score=31.29 Aligned_cols=36 Identities=17% Similarity=0.382 Sum_probs=27.6
Q ss_pred chhhhhcCCccceEeeccCccchHHHHhh----CC-CeeeccC
Q 013836 317 PQQQVLAHPAVGCFWTHSGWNSTLESICE----GI-PMICQPY 354 (435)
Q Consensus 317 p~~~ll~~~~v~~~I~HGG~gs~~eal~~----Gv-P~v~~P~ 354 (435)
+..++-..+++ +|+=||=||+..+++. ++ |++.+..
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 33445556788 9999999999999754 67 7888864
No 300
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=23.62 E-value=65 Score=28.53 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+++.++++ |+.|-+- ..|+++|.++||+|+.+.-.
T Consensus 11 ~~~~vlVT-GatG~iG--~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 11 GSMRALIT-GVAGFVG--KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp --CEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CcceEEEE-CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 34445555 4556543 56889999999999998763
No 301
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=23.57 E-value=74 Score=27.28 Aligned_cols=37 Identities=0% Similarity=-0.190 Sum_probs=24.4
Q ss_pred HHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEcc
Q 013836 105 LANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLT 148 (435)
Q Consensus 105 l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~ 148 (435)
++.+.. -+||+||..... ......-++.|||++.+..
T Consensus 53 ~E~i~~-------l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 53 VEAVKK-------LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp HHHHHH-------TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred HHHHHh-------cCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 455655 579999986432 2233455678999988754
No 302
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=23.44 E-value=76 Score=28.42 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=23.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+.|+|++. |+.|-+ -..|+++|.++||+|+.+.-
T Consensus 20 ~~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 20 HMKKVFIT--GICGQI--GSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp -CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEe--CCccHH--HHHHHHHHHHCCCEEEEEEC
Confidence 34665544 445543 35678999999999999876
No 303
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=23.40 E-value=37 Score=29.37 Aligned_cols=34 Identities=9% Similarity=0.010 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCC----CeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEG----FSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rG----H~Vt~~~~ 50 (435)
|++|||.|+=.|..|. .+++.|.++| |+|+++..
T Consensus 2 m~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 6779999987665554 4678898899 89988755
No 304
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=23.30 E-value=76 Score=27.65 Aligned_cols=32 Identities=6% Similarity=0.053 Sum_probs=24.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|.++++.++. -+ =.+++++|+++|++|+++.-
T Consensus 22 k~vlVTGas~-gI--G~aia~~La~~G~~V~~~~r 53 (272)
T 2nwq_A 22 STLFITGATS-GF--GEACARRFAEAGWSLVLTGR 53 (272)
T ss_dssp CEEEESSTTT-SS--HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEEC
Confidence 6777775544 33 35789999999999998865
No 305
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=23.22 E-value=82 Score=27.24 Aligned_cols=35 Identities=14% Similarity=0.280 Sum_probs=25.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
-+.|+++++.++. -+ =.+++++|+++|++|.++..
T Consensus 23 ~~~k~vlITGas~-gI--G~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 23 QAKRVAFVTGGMG-GL--GAAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp -CCCEEEETTTTS-HH--HHHHHHHHHTTTCEEEEEEC
T ss_pred hcCCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 3567888886554 22 25789999999999998874
No 306
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=23.12 E-value=2e+02 Score=24.79 Aligned_cols=55 Identities=7% Similarity=0.070 Sum_probs=34.1
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcc
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNSPNSCNYPHFEFCSFS 69 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~ 69 (435)
|++++|+++-.....+...+.. .|.++|++|+++.............+++-+-++
T Consensus 1 m~~~~vliiqh~~~e~~~~i~~---~l~~~G~~v~v~~~~~~~~~p~~~~~~d~lIl~ 55 (250)
T 3m3p_A 1 MSLKPVMIIQFSASEGPGHFGD---FLAGEHIPFQVLRMDRSDPLPAEIRDCSGLAMM 55 (250)
T ss_dssp -CCCCEEEEESSSSCCCHHHHH---HHHHTTCCEEEEEGGGTCCCCSCGGGSSEEEEC
T ss_pred CCCCeEEEEECCCCCCHHHHHH---HHHHCCCeEEEEeccCCCcCcCccccCCEEEEC
Confidence 5678899997766666665544 477899999999863222111122345555666
No 307
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=23.06 E-value=1.2e+02 Score=25.20 Aligned_cols=37 Identities=11% Similarity=0.120 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGH----INPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GH----v~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++++|.+++... +. ..-...|++.|+++|+.|+.-..
T Consensus 21 ~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG 61 (199)
T 3qua_A 21 RQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGG 61 (199)
T ss_dssp CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 457898887544 32 34567889999999998866544
No 308
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=23.05 E-value=89 Score=28.38 Aligned_cols=39 Identities=18% Similarity=0.026 Sum_probs=32.1
Q ss_pred CCEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 14 GRRVILFPL-PFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 14 ~~~il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
.++|+|++. |+.|--.-...||..|+++|++|.++..++
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 356665554 555999999999999999999999999974
No 309
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=23.00 E-value=86 Score=25.80 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=30.3
Q ss_pred CCEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQ---GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~---GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
..+|+|+|.-+. --.++...|++.|.++|.+|.|..+|
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 367888874432 34678899999999999999999984
No 310
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=22.96 E-value=72 Score=27.38 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=30.9
Q ss_pred CCEEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 14 GRRVILFP--LPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 14 ~~~il~~~--~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
+|+++.+. -|+.|--.-...||..|+++|++|.++-.+.
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 46666554 3445888899999999999999999998764
No 311
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=22.91 E-value=1.1e+02 Score=22.08 Aligned_cols=35 Identities=9% Similarity=0.118 Sum_probs=22.3
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|++++|+++- .+-.-...|.+.|.+.|++|..+.+
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 35 (127)
T 3i42_A 1 MSLQQALIVE----DYQAAAETFKELLEMLGFQADYVMS 35 (127)
T ss_dssp -CCEEEEEEC----SCHHHHHHHHHHHHHTTEEEEEESS
T ss_pred CCcceEEEEc----CCHHHHHHHHHHHHHcCCCEEEECC
Confidence 4567777764 3455556667777777887766554
No 312
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=22.91 E-value=3.3e+02 Score=22.66 Aligned_cols=39 Identities=26% Similarity=0.336 Sum_probs=31.3
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
|..++|+++++. +-.|..+.--+.|.++|.+|.-+++.+
T Consensus 22 p~~~Lr~avVCa---SN~NRSMEAH~~L~k~Gf~V~SfGTGs 60 (214)
T 4h3k_B 22 PSSPLRVAVVSS---SNQNRSMEAHNILSKRGFSVRSFGTGT 60 (214)
T ss_dssp ----CEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCCCeEEEECC---CCcchhHHHHHHHHHCCCceEeecCCC
Confidence 334799999985 788999999999999999999999954
No 313
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=22.87 E-value=66 Score=29.43 Aligned_cols=33 Identities=15% Similarity=0.307 Sum_probs=23.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+.++++ |+.|-+- ..|+++|.++||+|+.+.-.
T Consensus 29 k~vlVt-GatG~IG--~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALIT-GITGQDG--SYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp CEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEE-cCCchHH--HHHHHHHHHCCCEEEEEecC
Confidence 444454 4555443 56789999999999998763
No 314
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=22.74 E-value=97 Score=26.13 Aligned_cols=33 Identities=21% Similarity=0.170 Sum_probs=22.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
||.++++ |+.|-+ =..++++|.++||+|+++.-
T Consensus 1 Mk~vlVt-Gasg~i--G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 1 MSVIAIT-GSASGI--GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp -CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEe-CCCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 4445555 444533 34678999999999998875
No 315
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=22.61 E-value=92 Score=26.54 Aligned_cols=112 Identities=12% Similarity=0.113 Sum_probs=62.7
Q ss_pred hhhhhhcCCCCcEEEEEeccccCccccCCCchhhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhhCCC
Q 013836 269 SISWLDKQAPRSVIYVSFGLARGAEWLEPLPKGILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICEGIP 348 (435)
Q Consensus 269 l~~~l~~~~~~~vV~vs~G~v~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~GvP 348 (435)
+.++|.....+=+|.++|| +- +|..+.+..+.+++=. |+++ .=-..|...+..|+.+|..
T Consensus 93 ~~~~l~~~~~Dliv~agy~--~I------L~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi~~Ai~~G~~ 152 (229)
T 3auf_A 93 LAERLQAYGVDLVCLAGYM--RL------VRGPMLTAFPNRILNI----------HPSL--LPAFPGLEAQRQALEHGVK 152 (229)
T ss_dssp HHHHHHHTTCSEEEESSCC--SC------CCHHHHHHSTTCEEEE----------ESSC--TTSSCSSCHHHHHHHHTCS
T ss_pred HHHHHHhcCCCEEEEcChh--Hh------CCHHHHhhccCCEEEE----------ccCc--CcCCCCcCHHHHHHHcCCC
Confidence 5666766545433333333 22 5666765555444322 2222 2223589999999999999
Q ss_pred eeeccC--CCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 013836 349 MICQPY--FGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVKADSQEMRERATYL 407 (435)
Q Consensus 349 ~v~~P~--~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 407 (435)
..++-+ ..+..|.+..+.+ ..+.+....|.++|.+.+..+-. .-|.+..+.+
T Consensus 153 ~tGvTvh~v~~~~D~G~Ii~Q---~~v~I~~~dt~~~L~~rl~~~~~----~ll~~~l~~l 206 (229)
T 3auf_A 153 VAGCTVHFVTAGVDEGPIILQ---AAVPVLEGDTVEDLRRRILAEEH----RIYPEAIRLF 206 (229)
T ss_dssp EEEEEEEECCSSTTCSCEEEE---EEEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred eEEEEEEEECCCCcCCCEEEE---EEEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 987775 3344444444433 22333336788888888765422 3455444444
No 316
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=22.59 E-value=66 Score=26.58 Aligned_cols=32 Identities=25% Similarity=0.232 Sum_probs=22.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|||+++= +.|.+- ..+++.|.++||+|+++..
T Consensus 1 m~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLG--GTGNLG--KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeC
Confidence 5777763 244333 4678999999999998765
No 317
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=22.59 E-value=68 Score=28.18 Aligned_cols=33 Identities=18% Similarity=0.155 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+.+||.++=.|..| ..+|..|+++||+|+++..
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 44688888554444 5689999999999998765
No 318
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=22.51 E-value=1.6e+02 Score=21.59 Aligned_cols=48 Identities=13% Similarity=-0.017 Sum_probs=34.3
Q ss_pred hCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcC
Q 013836 345 EGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVK 394 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~ 394 (435)
..+|+|++--..+... .....+ .|+---+.+.++.++|.++|+++++.
T Consensus 78 ~~~~ii~~s~~~~~~~-~~~~~~-~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 78 AKPYVIVISAFSEMKY-FIKAIE-LGVHLFLPKPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp CCCEEEECCCCCCHHH-HHHHHH-HCCSEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcChHH-HHHHHh-CCcceeEcCCCCHHHHHHHHHHHHHH
Confidence 3677777766655433 344445 47766666679999999999999886
No 319
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=22.44 E-value=73 Score=28.25 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=23.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+|+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECC
Confidence 44443 5666663 56789999999999988763
No 320
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=22.42 E-value=1.1e+02 Score=25.69 Aligned_cols=35 Identities=14% Similarity=-0.028 Sum_probs=24.2
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSE--GFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~r--GH~Vt~~~~ 50 (435)
++.++|++. |+.|-+ -..|+++|.++ ||+|+.+.-
T Consensus 2 ~~~~~ilVt--GasG~i--G~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 2 ANLPTVLVT--GASGRT--GQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CSCCEEEEE--STTSHH--HHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCEEEEE--cCCcHH--HHHHHHHHHhcCCCcEEEEEEc
Confidence 344565554 455544 35688999999 899999876
No 321
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=22.38 E-value=65 Score=29.36 Aligned_cols=37 Identities=11% Similarity=0.302 Sum_probs=25.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSE-GFSITIIHTT 51 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~r-GH~Vt~~~~~ 51 (435)
.|+.|+|++. |+.|-+- ..|+++|.++ ||+|+.+.-.
T Consensus 21 ~m~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 21 SMKAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp --CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred ccCCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 3555676654 5566554 4678999998 9999999873
No 322
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=22.36 E-value=90 Score=25.77 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=30.4
Q ss_pred CCEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQ---GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~---GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
..+|+|+|.-+. -=.++...|++.|.++|.+|.|..+|
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 368888874332 34678899999999999999999984
No 323
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=22.36 E-value=79 Score=23.32 Aligned_cols=38 Identities=3% Similarity=-0.137 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++|||+++|..+.|--.-.-.+=+...++|.+|.+...
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~ 42 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSG 42 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEc
Confidence 57999999988875555445555666667999988664
No 324
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=22.30 E-value=91 Score=27.78 Aligned_cols=31 Identities=13% Similarity=0.399 Sum_probs=26.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.||.|+=.|..|. ++|+.|.++||+|++..-
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 5899999988884 689999999999998754
No 325
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=22.29 E-value=1e+02 Score=26.68 Aligned_cols=33 Identities=12% Similarity=0.015 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
-|.++++.++.| ==.+++++|+++|++|+++.-
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788866654 236789999999999988765
No 326
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=22.27 E-value=1.1e+02 Score=27.23 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
++.|+|++. |+.|.+- ..|+++|.++||+|+.+.-
T Consensus 9 ~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 9 PEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp CTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 455676554 5556553 4678999999999998875
No 327
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=22.26 E-value=52 Score=29.94 Aligned_cols=39 Identities=8% Similarity=0.003 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGH----INPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GH----v~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.||||+++..|..+- +.....+++.|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~ 44 (346)
T 3se7_A 2 SHMKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGIT 44 (346)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEEEEEC
Confidence 468999888544432 456778889998899999999874
No 328
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=22.19 E-value=1.3e+02 Score=24.70 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=27.3
Q ss_pred CEE-EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRV-ILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~i-l~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.|| +++..+...+-.....+++.|.+.|++|.+++-.
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 344 4555555566777888999999999999988774
No 329
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=22.10 E-value=47 Score=29.70 Aligned_cols=32 Identities=9% Similarity=-0.021 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+|||+|+=.|+.|- .+|..|. +||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 38999997777764 5688888 99999999873
No 330
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=22.02 E-value=1.2e+02 Score=24.47 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=29.3
Q ss_pred CCEEEEEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 14 GRRVILFP-LPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 14 ~~~il~~~-~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
+|+++.+. ..+.|--.-...|++.|.++|.+|.++....
T Consensus 3 ~~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 3 AMNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp -CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 45555444 4455888888899999999999999998743
No 331
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=22.00 E-value=65 Score=27.48 Aligned_cols=21 Identities=10% Similarity=0.227 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCCeEEEEeCC
Q 013836 31 MLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 31 ~l~La~~L~~rGH~Vt~~~~~ 51 (435)
-.++|++|+++|++|+++..+
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 467899999999999998764
No 332
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=21.99 E-value=49 Score=29.77 Aligned_cols=31 Identities=23% Similarity=0.151 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|||+|+=.|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 578887665555 4568899999999999875
No 333
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=21.97 E-value=1.8e+02 Score=22.73 Aligned_cols=37 Identities=8% Similarity=0.023 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.|||+|+..+.. ...-+....+.|.+.|++|.++++.
T Consensus 2 ~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 2 SMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 589999988755 3344556678888899999999984
No 334
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=21.88 E-value=63 Score=28.38 Aligned_cols=31 Identities=13% Similarity=0.222 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIH 49 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~ 49 (435)
+|||.|+=.|..|. .+++.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 47999886666663 46888999999998664
No 335
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=21.88 E-value=1.3e+02 Score=25.22 Aligned_cols=36 Identities=8% Similarity=0.098 Sum_probs=27.4
Q ss_pred CEEEEEcCCCccC--hHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGH--INPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GH--v~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
..++++..|..|+ ...+..+++.|.++|+.|..+-.
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 83 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDF 83 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcc
Confidence 4455666666665 66688999999999999887765
No 336
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=21.83 E-value=86 Score=25.53 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccChHHHH-HHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPML-QLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l-~La~~L~~rGH~Vt~~~~ 50 (435)
+|||+++... .|+..-+. .+++.|.+.|++|.++.-
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 4788888766 77655443 345666667999998876
No 337
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=21.82 E-value=1.2e+02 Score=26.70 Aligned_cols=37 Identities=11% Similarity=0.107 Sum_probs=26.6
Q ss_pred CEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCCCCC
Q 013836 15 RRVILFPLPFQGHINP-MLQLGSILYSEGFSITIIHTTLNS 54 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p-~l~La~~L~~rGH~Vt~~~~~~~~ 54 (435)
||||+.--=+. .-| +..|+++|.+.| +|+++.|..+.
T Consensus 1 M~ILlTNDDGi--~ApGi~aL~~aL~~~g-~V~VVAP~~~q 38 (280)
T 1l5x_A 1 MKILVTNDDGV--HSPGLRLLYQFALSLG-DVDVVAPESPK 38 (280)
T ss_dssp CEEEEECSSCT--TCHHHHHHHHHHGGGS-EEEEEEESSCT
T ss_pred CeEEEEcCCCC--CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 56766654333 334 778899999888 99999997553
No 338
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=21.81 E-value=1.3e+02 Score=25.45 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+-|.++++.++.| + =.+++++|+++|++|+++..
T Consensus 12 ~~~k~vlVTGas~g-I--G~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 12 LTGKTSLITGASSG-I--GSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp CTTCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEcC
Confidence 35566677755542 3 36789999999999998776
No 339
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.77 E-value=48 Score=27.94 Aligned_cols=19 Identities=16% Similarity=0.350 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCeEEEEeC
Q 013836 32 LQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 32 l~La~~L~~rGH~Vt~~~~ 50 (435)
+.+|..|+++|++|+++=-
T Consensus 15 L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHCCCCEEEEEC
Confidence 7789999999999999864
No 340
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.76 E-value=60 Score=26.14 Aligned_cols=35 Identities=17% Similarity=0.101 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSE-GFSITIIHTT 51 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~r-GH~Vt~~~~~ 51 (435)
+.++||+++=. |.+ -..+++.|.++ ||+|+++...
T Consensus 37 ~~~~~v~IiG~---G~~--G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 37 PGHAQVLILGM---GRI--GTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp CTTCSEEEECC---SHH--HHHHHHHHHHHHCSCEEEEESC
T ss_pred CCCCcEEEECC---CHH--HHHHHHHHHhccCCeEEEEECC
Confidence 45678888843 332 35678999999 9999999874
No 341
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=21.75 E-value=65 Score=27.39 Aligned_cols=37 Identities=24% Similarity=0.149 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+..++++..|..|+..-+..+++.|.++|+.|..+-.
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 84 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAET 84 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECC
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecC
Confidence 4556777778888888889999999999998887655
No 342
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=21.74 E-value=1.2e+02 Score=25.43 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=27.6
Q ss_pred CEEEEEcCCCccC--hHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGH--INPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GH--v~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
...+++..|..|+ ..-+..+++.|.++|++|..+--
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 3456666677777 67778899999999999876654
No 343
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=21.73 E-value=70 Score=26.82 Aligned_cols=32 Identities=13% Similarity=0.206 Sum_probs=23.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|.++++. +.|-+ -..++++|.++||+|+++..
T Consensus 6 k~vlVtG-asggi--G~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLITG-ASRGI--GEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEESS-TTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC-CCcHH--HHHHHHHHHHCCCEEEEEEC
Confidence 4555664 44433 36789999999999998876
No 344
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=21.73 E-value=72 Score=28.63 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=27.9
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQ--GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.+|++++.++- |+= +.+|+.|.++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEec
Confidence 48999997765 553 78899999999999998763
No 345
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=21.72 E-value=1.4e+02 Score=25.98 Aligned_cols=38 Identities=16% Similarity=0.131 Sum_probs=26.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTTLNS 54 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~~~ 54 (435)
||||+.--=+. |--=+..|+++|.+.| +|+++.|..+.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~ 39 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNR 39 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCC
Confidence 67877764443 2233677889998776 99999997543
No 346
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=21.68 E-value=98 Score=26.69 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
-|.++++-++.| + =.+++++|+++|++|+++.-
T Consensus 20 ~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 20 GKRALITGATKG-I--GADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp TCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 367778766553 2 35789999999999988776
No 347
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=21.53 E-value=1.4e+02 Score=23.44 Aligned_cols=38 Identities=18% Similarity=0.041 Sum_probs=25.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+|..|||.+-+-.+. +.==-.|.+.|.++||+|+=+++
T Consensus 4 ~m~~mkI~igsDhaG--~~lK~~i~~~L~~~G~eV~D~G~ 41 (148)
T 4em8_A 4 SMVVKRVFLSSDHAG--VELRLFLSAYLRDLGCEVFDCGC 41 (148)
T ss_dssp CCSCSEEEEEECGGG--HHHHHHHHHHHHHTTCEEEECCC
T ss_pred cceeeEEEEEECchh--HHHHHHHHHHHHHCCCEEEEeCC
Confidence 567788887654221 12223567889999999998887
No 348
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=21.46 E-value=1.1e+02 Score=26.59 Aligned_cols=33 Identities=24% Similarity=0.144 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.|.++++.++.| + =.++|++|+++|++|+++.-
T Consensus 4 ~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r 36 (264)
T 3tfo_A 4 DKVILITGASGG-I--GEGIARELGVAGAKILLGAR 36 (264)
T ss_dssp TCEEEESSTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCccH-H--HHHHHHHHHHCCCEEEEEEC
Confidence 467778765542 2 35789999999999998865
No 349
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=21.42 E-value=86 Score=25.76 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=28.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+.+++..|..|+-.-+..+++.|.++|+.|..+--
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 345566677778888889999999999998866543
No 350
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=21.37 E-value=69 Score=29.25 Aligned_cols=37 Identities=19% Similarity=0.013 Sum_probs=28.7
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQ--GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.-..+-|.+.- ||..|.+.-...|++.||++.++..+
T Consensus 15 v~~G~~PTG~lHLGn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 15 ILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp EEEEECCCSSCBHHHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEeeCCCCcccHHhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 33446666644 99998888889999999999998863
No 351
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=21.34 E-value=78 Score=27.61 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=24.8
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 16 RVILFPLPFQ-GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 16 ~il~~~~~~~-GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
|.++++.++. +-+ =.++|++|+++|++|+++.-.
T Consensus 27 k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~ 61 (280)
T 3nrc_A 27 KKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVG 61 (280)
T ss_dssp CEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCc
Confidence 6778886441 113 367899999999999888763
No 352
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=21.18 E-value=1.1e+02 Score=26.08 Aligned_cols=34 Identities=18% Similarity=-0.003 Sum_probs=24.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYS-EGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~-rGH~Vt~~~~ 50 (435)
++|.++++. +.|-+ -..+++.|++ +|++|+++.-
T Consensus 3 ~~k~vlITG-asggI--G~~~a~~L~~~~g~~V~~~~r 37 (276)
T 1wma_A 3 GIHVALVTG-GNKGI--GLAIVRDLCRLFSGDVVLTAR 37 (276)
T ss_dssp CCCEEEESS-CSSHH--HHHHHHHHHHHSSSEEEEEES
T ss_pred CCCEEEEeC-CCcHH--HHHHHHHHHHhcCCeEEEEeC
Confidence 345666764 44433 3578999999 9999998876
No 353
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=21.14 E-value=76 Score=26.75 Aligned_cols=41 Identities=20% Similarity=0.172 Sum_probs=32.2
Q ss_pred CCCEEEEEcC--CCccChHHHHHHHHHHHhC-CCeEEEEeCCCC
Q 013836 13 NGRRVILFPL--PFQGHINPMLQLGSILYSE-GFSITIIHTTLN 53 (435)
Q Consensus 13 ~~~~il~~~~--~~~GHv~p~l~La~~L~~r-GH~Vt~~~~~~~ 53 (435)
+++|++.+.. |+.|--.-...||..|+++ |++|.++-.+..
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 3566665543 5568899999999999999 999999988654
No 354
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=21.08 E-value=50 Score=28.93 Aligned_cols=39 Identities=8% Similarity=-0.102 Sum_probs=35.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHH--------HHhC-CCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSI--------LYSE-GFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~--------L~~r-GH~Vt~~~~~ 51 (435)
++.+|++.+.++..|-....-++.. |..+ |++|+.++..
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~ 166 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQ 166 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSS
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCC
Confidence 5679999999999999999888877 9999 9999999884
No 355
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=21.06 E-value=92 Score=27.82 Aligned_cols=37 Identities=8% Similarity=0.070 Sum_probs=24.7
Q ss_pred HHHHHhccCCcCCCCccEEEEcCch-hhHHHHHHHcCCCeEEEcc
Q 013836 105 LANKLMSNAQESKDSFACLITDAAW-FIALSVANDFKLPTIVLLT 148 (435)
Q Consensus 105 l~~l~~~~~~~~~~~~Dlvi~D~~~-~~~~~~A~~~giP~v~~~~ 148 (435)
++.+.. -+||+||..... .....--++.|||++.+..
T Consensus 77 ~E~i~~-------l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 77 IESLLA-------LKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp HHHHHH-------TCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred HHHHHc-------cCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 466665 679999987533 2233444678999998754
No 356
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=21.04 E-value=78 Score=27.59 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=27.7
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLPFQ--GHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.+|++++.++- |+= +.+|+.|.++|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEec
Confidence 48999997765 443 78899999999999998763
No 357
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=21.03 E-value=1.2e+02 Score=27.67 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=31.0
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 15 RRVILFPL-PFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 15 ~~il~~~~-~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
++|+|++. |+.|--.-...||..|+++|++|.++..+.
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 44554443 455999999999999999999999999975
No 358
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.03 E-value=54 Score=27.18 Aligned_cols=36 Identities=8% Similarity=0.037 Sum_probs=28.2
Q ss_pred CCccceEeeccCccchHHHHhhCCCeeeccCCCchhHHH
Q 013836 324 HPAVGCFWTHSGWNSTLESICEGIPMICQPYFGDQMVNS 362 (435)
Q Consensus 324 ~~~v~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na 362 (435)
.+++ +|+.||-......- .++|+|-++...---..|
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~~Dil~a 86 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTRFDTMRA 86 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCHhHHHHH
Confidence 4555 99999999999975 689999999866444444
No 359
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=21.02 E-value=1e+02 Score=26.39 Aligned_cols=36 Identities=14% Similarity=0.089 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 12 RNGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|.+.|.++++-++. -+ =.+++++|+++|++|+++..
T Consensus 1 M~~~k~vlVTGas~-gI--G~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 1 MEQNKCALVTGSSR-GV--GKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp --CCCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEecCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 34456778885554 23 35789999999999998744
No 360
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=20.95 E-value=94 Score=27.71 Aligned_cols=32 Identities=22% Similarity=0.274 Sum_probs=22.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|+|++. |+.|.+- ..|+++|.++||+|+.+..
T Consensus 1 m~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 1 MRVLVT--GGSGYIG--SHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEec
Confidence 454433 5666553 4688999999999998764
No 361
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=20.95 E-value=81 Score=22.69 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEeCC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEG-FSITIIHTT 51 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rG-H~Vt~~~~~ 51 (435)
.++|+++ |+ |-+- ..+++.|.++| |+|+++...
T Consensus 5 ~~~v~I~--G~-G~iG--~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVV--GA-GKIG--QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEE--CC-SHHH--HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEE--CC-CHHH--HHHHHHHHhCCCceEEEEeCC
Confidence 3577766 44 5432 46789999999 999888763
No 362
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=20.89 E-value=1.1e+02 Score=27.57 Aligned_cols=38 Identities=11% Similarity=0.003 Sum_probs=30.8
Q ss_pred CEEEEEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013836 15 RRVILFP-LPFQGHINPMLQLGSILYSEGFSITIIHTTL 52 (435)
Q Consensus 15 ~~il~~~-~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~~ 52 (435)
++|+|+. -|+.|--.-...||..|+++|++|.++..+.
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3444443 3455999999999999999999999999975
No 363
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=20.75 E-value=1.7e+02 Score=24.39 Aligned_cols=37 Identities=8% Similarity=0.178 Sum_probs=26.9
Q ss_pred CEEEEEcCC---------CccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 15 RRVILFPLP---------FQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 15 ~~il~~~~~---------~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
+||+|+... ..-...=+....+.|.++|++|+++++.
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~ 51 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQ 51 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCC
Confidence 377777652 2234456677778888999999999984
No 364
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=20.74 E-value=98 Score=26.43 Aligned_cols=36 Identities=19% Similarity=-0.005 Sum_probs=24.2
Q ss_pred HHHHHhccCCcCCCCccEEEEcCch--hhHHHHHHHcCCCeEEEc
Q 013836 105 LANKLMSNAQESKDSFACLITDAAW--FIALSVANDFKLPTIVLL 147 (435)
Q Consensus 105 l~~l~~~~~~~~~~~~Dlvi~D~~~--~~~~~~A~~~giP~v~~~ 147 (435)
++++.. -+||+||..... .....--++.|||++.+.
T Consensus 52 ~E~i~~-------l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 52 SEGILS-------LRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp HHHHHT-------TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHc-------cCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 566666 689999986532 223334467899998864
No 365
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=20.73 E-value=1.4e+02 Score=26.74 Aligned_cols=115 Identities=8% Similarity=0.046 Sum_probs=67.4
Q ss_pred cchhhhhhhcCCCCcEEEEEeccccCccccCCCchhhHhhhcCCceEEeecchhhhhcCCccceEeeccCccchHHHHhh
Q 013836 266 DQSSISWLDKQAPRSVIYVSFGLARGAEWLEPLPKGILEMVDGRGYIVKWAPQQQVLAHPAVGCFWTHSGWNSTLESICE 345 (435)
Q Consensus 266 ~~~l~~~l~~~~~~~vV~vs~G~v~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~ll~~~~v~~~I~HGG~gs~~eal~~ 345 (435)
+.++.++|++...+=+|.+.| ++- |++.+.+..+.+++=. |+++ .=...|.+.+..|+.+
T Consensus 170 ~~~~~~~l~~~~~DliVlagy--m~I------L~~~~l~~~~~~~INi----------HpSl--LP~frG~~p~~~Ai~~ 229 (302)
T 3o1l_A 170 FAEVSRLVGHHQADVVVLARY--MQI------LPPQLCREYAHQVINI----------HHSF--LPSFVGAKPYHQASLR 229 (302)
T ss_dssp HHHHHHHHHHTTCSEEEESSC--CSC------CCTTHHHHTTTCEEEE----------ESSC--TTSSCSSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEHhHh--hhh------cCHHHHhhhhCCeEEe----------Cccc--ccCCCCccHHHHHHHc
Confidence 345788888765554444443 333 6667776666555422 2222 2234689999999999
Q ss_pred CCCeeeccCC--CchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 013836 346 GIPMICQPYF--GDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVKADSQEMRERATYL 407 (435)
Q Consensus 346 GvP~v~~P~~--~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 407 (435)
|+...++-.+ .+..+.+..+.+ .-+.+...-|.++|.+.+..+-. .-|.+..+.+
T Consensus 230 G~k~tG~TvH~v~~~lD~GpII~Q---~~v~I~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 286 (302)
T 3o1l_A 230 GVKLIGATCHYVTEELDAGPIIEQ---DVVRVSHRDSIENMVRFGRDVEK----MVLARGLRAH 286 (302)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEE---EEEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCCcCCCeEEE---EEEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999888753 233333333322 12333336788999888876533 3555555544
No 366
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=20.68 E-value=1.1e+02 Score=26.23 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=27.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
..+++..|..|+..-+..+++.|.++|++|..+-.
T Consensus 47 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 81 (315)
T 4f0j_A 47 RTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQ 81 (315)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeec
Confidence 34555556777777788999999999999988776
No 367
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=20.64 E-value=1.7e+02 Score=26.70 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++|||+++-. | .....+++++.+.|++|..+...
T Consensus 10 ~~~~ili~g~---g--~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 10 AATRVMLLGS---G--ELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp TCCEEEEESC---S--HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECC---C--HHHHHHHHHHHHcCCEEEEEECC
Confidence 3589998844 2 24577899999999999988874
No 368
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=20.58 E-value=66 Score=27.82 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=27.2
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQ--GHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~--GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
.+|++++-++- |+= +.+|+.|.++|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDG---LVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEc
Confidence 48999997765 443 7889999999999999865
No 369
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=20.57 E-value=2.4e+02 Score=22.41 Aligned_cols=48 Identities=2% Similarity=-0.022 Sum_probs=32.8
Q ss_pred hCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcC
Q 013836 345 EGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVK 394 (435)
Q Consensus 345 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~ 394 (435)
..+|+|++--..|.. .+....+ .|+---+.+.++.++|..+|+.++..
T Consensus 78 ~~~~ii~lt~~~~~~-~~~~a~~-~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 78 PRTTLVALVEYESPA-VLSQIIE-LECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp TTCEEEEEECCCSHH-HHHHHHH-HTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCChH-HHHHHHH-cCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 457888877666644 4455555 47764454458889999999888765
No 370
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=20.52 E-value=81 Score=27.22 Aligned_cols=32 Identities=22% Similarity=0.148 Sum_probs=24.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 16 RVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 16 ~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|.++++-++.| + =.+++++|+++|++|+++.-
T Consensus 28 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 59 (260)
T 3gem_A 28 APILITGASQR-V--GLHCALRLLEHGHRVIISYR 59 (260)
T ss_dssp CCEEESSTTSH-H--HHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 56777765543 2 35789999999999998876
No 371
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=20.50 E-value=53 Score=29.42 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEeC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGF-SITIIHT 50 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH-~Vt~~~~ 50 (435)
+.|||.|+=.|..| ..+|+.|+++|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 35899998766556 478999999999 9998766
No 372
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=20.50 E-value=72 Score=27.05 Aligned_cols=37 Identities=24% Similarity=0.313 Sum_probs=28.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+..++++..|..|+..-+..+++.|.++|+.|..+..
T Consensus 53 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 89 (262)
T 1jfr_A 53 TFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDT 89 (262)
T ss_dssp CEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECC
T ss_pred CCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCC
Confidence 3456666677778877788899999999998877665
No 373
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.44 E-value=1.8e+02 Score=21.46 Aligned_cols=67 Identities=10% Similarity=0.022 Sum_probs=47.6
Q ss_pred hhhcCCccceEeeccCccc---------hHHHHhhCCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHH
Q 013836 320 QVLAHPAVGCFWTHSGWNS---------TLESICEGIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILR 390 (435)
Q Consensus 320 ~ll~~~~v~~~I~HGG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ 390 (435)
.=+..+++ +|--.|..| +-.|...|+|+|++=.++.+.. -..+++. + ..+- ..+.+.|.++|+.
T Consensus 34 ~~I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l~~~-a--~~iV-~Wn~~~I~~aI~~ 106 (111)
T 1eiw_A 34 ATPEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPELEAV-S--SEVV-GWNPHCIRDALED 106 (111)
T ss_dssp CCSSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTHHHH-C--SEEE-CSCHHHHHHHHHH
T ss_pred CccccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHHHhh-C--ceec-cCCHHHHHHHHHh
Confidence 45667888 999999998 6778899999999887776521 1124431 2 2222 4889999999988
Q ss_pred HHc
Q 013836 391 VMV 393 (435)
Q Consensus 391 vl~ 393 (435)
.++
T Consensus 107 ~~~ 109 (111)
T 1eiw_A 107 ALD 109 (111)
T ss_dssp HHC
T ss_pred ccC
Confidence 764
No 374
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=20.39 E-value=1.4e+02 Score=24.73 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCc-------cChHHHHHHHHHHHhCCCeEEE
Q 013836 12 RNGRRVILFPLPFQ-------GHINPMLQLGSILYSEGFSITI 47 (435)
Q Consensus 12 ~~~~~il~~~~~~~-------GHv~p~l~La~~L~~rGH~Vt~ 47 (435)
|+.++|.++..-.. -...-...|++.|+++|+.|+.
T Consensus 21 ~~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs 63 (195)
T 1rcu_A 21 GHMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN 63 (195)
T ss_dssp --CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe
Confidence 33457888875322 3456788999999999998776
No 375
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=20.30 E-value=1.3e+02 Score=25.44 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+.|.++++-++. -+ =.+++++|+++|++|+++..
T Consensus 3 ~~k~~lVTGas~-gI--G~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 3 MTKSALVTGASR-GI--GRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CSCEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCC-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 346777775554 22 35789999999999988765
No 376
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=20.26 E-value=94 Score=29.36 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 15 RRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
|||.++=.|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 678887555445 4678899999999998865
No 377
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=20.23 E-value=1.1e+02 Score=29.47 Aligned_cols=36 Identities=6% Similarity=0.185 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC-CC-eEEEEeCCCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSE-GF-SITIIHTTLN 53 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~r-GH-~Vt~~~~~~~ 53 (435)
..|||.++=.|..| ..+|..|+++ || +|+++.....
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 45899999877777 5789999999 99 9999987543
No 378
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=20.20 E-value=85 Score=27.07 Aligned_cols=31 Identities=19% Similarity=0.052 Sum_probs=21.5
Q ss_pred CCccEEEEcCch-------hhHHHHHHHcCCCeEEEcc
Q 013836 118 DSFACLITDAAW-------FIALSVANDFKLPTIVLLT 148 (435)
Q Consensus 118 ~~~Dlvi~D~~~-------~~~~~~A~~~giP~v~~~~ 148 (435)
.+||++++|... .-+..+.-.+|+|+|.+.=
T Consensus 108 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 145 (246)
T 3ga2_A 108 TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAK 145 (246)
T ss_dssp SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeec
Confidence 479999999743 1233455667899999744
No 379
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=20.15 E-value=1.1e+02 Score=26.79 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=25.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013836 13 NGRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
.+.|+++++.++.| + -.+++++|+++|++|+++.-.
T Consensus 10 ~~~k~vlITGas~G-I--G~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 10 TKRRCAVVTGGNKG-I--GFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp --CCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEEecCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 34577888866553 2 357899999999999988763
No 380
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=20.05 E-value=1.3e+02 Score=25.55 Aligned_cols=34 Identities=21% Similarity=0.186 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013836 14 GRRVILFPLPFQGHINPMLQLGSILYSEGFSITIIHT 50 (435)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~La~~L~~rGH~Vt~~~~ 50 (435)
+-|.++++.++ |-+ =.+++++|+++|++|+++.-
T Consensus 18 ~~k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 18 RDKGVLVLAAS-RGI--GRAVADVLSQEGAEVTICAR 51 (249)
T ss_dssp TTCEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEcC
Confidence 34556666444 333 35689999999999998865
No 381
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.05 E-value=1.2e+02 Score=22.44 Aligned_cols=33 Identities=9% Similarity=0.015 Sum_probs=24.2
Q ss_pred EEcCCCccCh--HHHHHHHHHHHhCCCeEEEEeCC
Q 013836 19 LFPLPFQGHI--NPMLQLGSILYSEGFSITIIHTT 51 (435)
Q Consensus 19 ~~~~~~~GHv--~p~l~La~~L~~rGH~Vt~~~~~ 51 (435)
++..+-+|+. .-.+.++..+...||+|.++-..
T Consensus 7 vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 7 VFSTAPHGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 3333344655 55788899999999999998884
No 382
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=20.02 E-value=1.6e+02 Score=21.70 Aligned_cols=47 Identities=13% Similarity=0.116 Sum_probs=33.6
Q ss_pred CCCeeeccCCCchhHHHHHHHhhhccEEEeCCcCCHHHHHHHHHHHHcC
Q 013836 346 GIPMICQPYFGDQMVNSRYVSHAWRVGLQLEGKLERKEIERAILRVMVK 394 (435)
Q Consensus 346 GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~vl~~ 394 (435)
.+|+|++--..+... ..+..+ .|+---+.+.++.++|.++|++++..
T Consensus 78 ~~pii~~t~~~~~~~-~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 78 TLPILMLTAQGDISA-KIAGFE-AGANDYLAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp TCCEEEEECTTCHHH-HHHHHH-HTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CccEEEEecCCCHHH-HHHHHh-cCcceEEeCCCCHHHHHHHHHHHHhc
Confidence 678888776665443 344445 47665565569999999999999976
Done!