BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013838
(435 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1 OS=Arabidopsis thaliana GN=At5g07830 PE=2
SV=1
Length = 543
Score = 597 bits (1539), Expect = e-170, Method: Compositional matrix adjust.
Identities = 275/417 (65%), Positives = 337/417 (80%), Gaps = 6/417 (1%)
Query: 1 MGIFLSLFIYLISYLPVI----LARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKC 56
MG + + + + L ++ +A+++ R +I + + V DE+F+CAT+DWWPHDKC
Sbjct: 1 MGFRVCVIVVFLGCLLLVPEKTMAQEMKRASIVIQGARRVCETDENFVCATLDWWPHDKC 60
Query: 57 NYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRK 116
NY+ CPWG SSVIN+DL+ PLL AI+AF+ LRIRIGGSLQDQV+YDVG+LK PC PF+K
Sbjct: 61 NYDQCPWGYSSVINMDLTRPLLTKAIKAFKPLRIRIGGSLQDQVIYDVGNLKTPCRPFQK 120
Query: 117 MKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNAR 176
M GLFGFSKGCLHM+RWDELN T A+V+FGLNAL GRH +R AWGGAWD N +
Sbjct: 121 MNSGLFGFSKGCLHMKRWDELNSFLTATGAVVTFGLNALRGRHKLRGKAWGGAWDHINTQ 180
Query: 177 DFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNS-SSKP 235
DFL YT+S GY IDSWE+GNELSG + +GASV AELYGKDLI LK++IN++YKNS KP
Sbjct: 181 DFLNYTVSKGYVIDSWEFGNELSG-SGVGASVSAELYGKDLIVLKDVINKVYKNSWLHKP 239
Query: 236 TILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSET 295
++APGGF++Q+WY K L++SG +VV+ VTHHIYNLG G DP LV KI++P LS+VS+T
Sbjct: 240 ILVAPGGFYEQQWYTKLLEISGPSVVDVVTHHIYNLGSGNDPALVKKIMDPSYLSQVSKT 299
Query: 296 FGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCR 355
F ++ QTI++HGPWAS WVGESGGAYNSGGRHVS+TF++SFWYLDQLGMS+++NTKVYCR
Sbjct: 300 FKDVNQTIQEHGPWASPWVGESGGAYNSGGRHVSDTFIDSFWYLDQLGMSARHNTKVYCR 359
Query: 356 QTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKER 412
QTLVGG YGLL TF+PNPDYYSALLWHRLMGKGVL+V TDG LR YAHCSK R
Sbjct: 360 QTLVGGFYGLLEKGTFVPNPDYYSALLWHRLMGKGVLAVQTDGPPQLRVYAHCSKGR 416
>sp|Q8L608|HPSE2_ARATH Heparanase-like protein 2 OS=Arabidopsis thaliana GN=At5g61250 PE=2
SV=1
Length = 539
Score = 585 bits (1508), Expect = e-166, Method: Compositional matrix adjust.
Identities = 267/410 (65%), Positives = 330/410 (80%), Gaps = 4/410 (0%)
Query: 3 IFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCP 62
+FLS + L PV ++ R T+ +D ++ +A DE+FICAT+DWWP +KCNY+ CP
Sbjct: 7 VFLSCLLLLP---PVTFGSNMERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCP 63
Query: 63 WGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLF 122
WG +S+INL+L+ PLLA AIQAF++LRIRIGGSLQDQV+YDVGDLK PC F+K DGLF
Sbjct: 64 WGYASLINLNLASPLLAKAIQAFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTDDGLF 123
Query: 123 GFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYT 182
GFS+GCL+M+RWDE+N FN T AIV+FGLNALHGR+ + AWGG WD N +DF+ YT
Sbjct: 124 GFSEGCLYMKRWDEVNHFFNATGAIVTFGLNALHGRNKLNGTAWGGDWDHTNTQDFMNYT 183
Query: 183 ISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGG 242
+S GY IDSWE+GNELSG + I ASV ELYGKDLI LKN+I +YKNS +KP ++APGG
Sbjct: 184 VSKGYAIDSWEFGNELSG-SGIWASVSVELYGKDLIVLKNVIKNVYKNSRTKPLVVAPGG 242
Query: 243 FFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQT 302
FF+++WY++ L++SG V++ +THHIYNLGPG DP LV+KIL+P LS +SE F N+ QT
Sbjct: 243 FFEEQWYSELLRLSGPGVLDVLTHHIYNLGPGNDPKLVNKILDPNYLSGISELFANVNQT 302
Query: 303 IEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGN 362
I++HGPWA+AWVGE+GGA+NSGGR VS TF+NSFWYLDQLG+SSK+NTKVYCRQ LVGG
Sbjct: 303 IQEHGPWAAAWVGEAGGAFNSGGRQVSETFINSFWYLDQLGISSKHNTKVYCRQALVGGF 362
Query: 363 YGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKER 412
YGLL TF+PNPDYYSALLWHRLMGKG+L V T S LR+Y HCSK R
Sbjct: 363 YGLLEKETFVPNPDYYSALLWHRLMGKGILGVQTTASEYLRAYVHCSKRR 412
>sp|Q9FZP1|HPSE3_ARATH Heparanase-like protein 3 OS=Arabidopsis thaliana GN=At5g34940 PE=2
SV=2
Length = 536
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/408 (51%), Positives = 276/408 (67%), Gaps = 3/408 (0%)
Query: 5 LSLFIYLISYLPVILARDVTRV-TIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPW 63
+ LF+ + +L ++ V T+FV V T DE FICAT+DWWP +KC+Y C W
Sbjct: 9 IVLFLCVFQFLDCTVSSAVEENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSW 68
Query: 64 GNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFG 123
++S++NLDL++ +L NAI+AF L+IRIGG+LQD V+Y+ D K PC PF K LFG
Sbjct: 69 DHASILNLDLNNVILQNAIKAFAPLKIRIGGTLQDIVIYETPDSKQPCLPFTKNSSILFG 128
Query: 124 FSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTI 183
+++GCL M+RWDELN F +T V FGLNAL GR + GAW+ NA F+++T
Sbjct: 129 YTQGCLPMRRWDELNAFFRKTGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTA 188
Query: 184 SMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGF 243
Y ID WE GNEL G + +GA V A Y D INL+NI+N +YKN S P ++ PGGF
Sbjct: 189 ENNYTIDGWELGNELCG-SGVGARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGF 247
Query: 244 FDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTI 303
F+ +W+ ++L N +N T HIY+LGPGVD +L+ KILNP L + +++F +LK I
Sbjct: 248 FEVDWFTEYLN-KAENSLNATTRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNII 306
Query: 304 EKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVGGNY 363
+ A AWVGESGGAYNSG VSN FV SFWYLDQLGM+S Y+TK YCRQ+L+GGNY
Sbjct: 307 KNSSTKAVAWVGESGGAYNSGRNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLIGGNY 366
Query: 364 GLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCSKE 411
GLLN T F PNPDYYSAL+W +LMG+ L G+ +RSY HC+++
Sbjct: 367 GLLNTTNFTPNPDYYSALIWRQLMGRKALFTTFSGTKKIRSYTHCARQ 414
>sp|Q9LRC8|BAGLU_SCUBA Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis GN=SGUS
PE=1 SV=1
Length = 527
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 250/422 (59%), Gaps = 22/422 (5%)
Query: 5 LSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWG 64
L + + + ++ ++ + T V I VA DE+++CAT+D WP KCNY +CPWG
Sbjct: 10 LCVLCFSLIFICGVIGEETTIVKI---EENPVAQTDENYVCATLDLWPPTKCNYGNCPWG 66
Query: 65 NSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHP-FRKMKDGLFG 123
SS +NLDL++ ++ NA++ F L++R GG+LQD+++Y PC F + +
Sbjct: 67 KSSFLNLDLNNNIIRNAVKEFAPLKLRFGGTLQDRLVYQTSR-DEPCDSTFYNNTNLILD 125
Query: 124 FSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHN-----IRHNAW-------GGAWD 171
FS CL + RWDE+NQ T + FGLNAL G+ I+ + G WD
Sbjct: 126 FSHACLSLDRWDEINQFILETGSEAVFGLNALRGKTVEIKGIIKDGQYLGETTTAVGEWD 185
Query: 172 SNNARDFLKYTISMGYQ-IDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKN 230
+N++ ++Y++ GY+ I W GNEL G T + V E Y D L ++ E+Y++
Sbjct: 186 YSNSKFLIEYSLKKGYKHIRGWTLGNELGGHT-LFIGVSPEDYANDAKKLHELVKEIYQD 244
Query: 231 SSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLS 290
+ P I+APG FD EWY +F+ + ++ THH+YNLG G D L +L
Sbjct: 245 QGTMPLIIAPGAIFDLEWYTEFIDRTPE--LHVATHHMYNLGSGGDDALKDVLLTASFFD 302
Query: 291 RVSET-FGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYN 349
+++ + L++ + + G A AW+GE+GGA+NSG +SNTF+N FWYL+ LG S+ +
Sbjct: 303 EATKSMYEGLQKIVNRPGTKAVAWIGEAGGAFNSGQDGISNTFINGFWYLNMLGYSALLD 362
Query: 350 TKVYCRQTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSLRSYAHCS 409
TK +CRQTL GGNYGLL T+IPNPDYYSALLWHRLMG VL G+ ++ YAHC+
Sbjct: 363 TKTFCRQTLTGGNYGLLQTGTYIPNPDYYSALLWHRLMGSKVLKTEIVGTKNVYIYAHCA 422
Query: 410 KE 411
K+
Sbjct: 423 KK 424
>sp|Q90YK5|HPSE_CHICK Heparanase OS=Gallus gallus GN=HPSE PE=1 SV=1
Length = 523
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 136/270 (50%), Gaps = 20/270 (7%)
Query: 150 FGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNEL-SGRTSIGASV 208
FGLNAL R ++ WDS+NA+ L Y Y I SWE GNE S R G +
Sbjct: 165 FGLNALLRRAGLQ-------WDSSNAKQLLGYCAQRSYNI-SWELGNEPNSFRKKSGICI 216
Query: 209 DAELYGKDLINLKNIINE--LYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVT- 265
D G+D ++L+ ++++ LY+++ + Q F++ SG ++ VT
Sbjct: 217 DGFQLGRDFVHLRQLLSQHPLYRHAELYGLDVGQPRKHTQHLLRSFMK-SGGKAIDSVTW 275
Query: 266 HHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGG 325
HH Y G L+P+ L + ++ +E P W+GE+G AY G
Sbjct: 276 HHYYVNGRSATRE---DFLSPEVLDSFATAIHDVLGIVEATVPGKKVWLGETGSAYGGGA 332
Query: 326 RHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVG-GNYGLLNATTFIPNPDYYSALLWH 384
+SNT+V F +LD+LG++++ V RQ G G+Y L++A F P PDY+ +LL+
Sbjct: 333 PQLSNTYVAGFMWLDKLGLAARRGIDVVMRQVSFGAGSYHLVDA-GFKPLPDYWLSLLYK 391
Query: 385 RLMGKGVLSVATDGSSSLRS--YAHCSKER 412
RL+G VL + + + + R Y HC+ R
Sbjct: 392 RLVGTRVLQASVEQADARRPRVYLHCTNPR 421
>sp|Q9MYY0|HPSE_BOVIN Heparanase OS=Bos taurus GN=HPSE PE=2 SV=2
Length = 545
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 23/271 (8%)
Query: 150 FGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNEL-SGRTSIGASV 208
FG+NAL ++ WDS+NA+ L Y S Y I SWE GNE S + G +
Sbjct: 188 FGVNALLRTTDMH-------WDSSNAQLLLDYCSSKNYNI-SWELGNEPNSFQRKAGIFI 239
Query: 209 DAELYGKDLINLKNIINE-LYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVT-H 266
+ G+D I + ++ + +KN+ + + FL+ +G V++ VT H
Sbjct: 240 NGRQLGEDFIEFRKLLGKSAFKNAKLYGPDIGQPRRNTVKMLKSFLK-AGGEVIDSVTWH 298
Query: 267 HIYNLGPGVDPNLVSK--ILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSG 324
H Y V+ + +K LNP L + + +EK P W+GE+ A+ G
Sbjct: 299 HYY-----VNGRIATKEDFLNPDILDTFISSVQKTLRIVEKIRPLKKVWLGETSSAFGGG 353
Query: 325 GRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVG-GNYGLLNATTFIPNPDYYSALLW 383
+SNTF F +LD+LG+S++ +V RQ L G GNY L++ F P PDY+ +LL+
Sbjct: 354 APFLSNTFAAGFMWLDKLGLSARMGIEVVMRQVLFGAGNYHLVDG-NFEPLPDYWLSLLF 412
Query: 384 HRLMGKGVLSVATDGS--SSLRSYAHCSKER 412
+L+G VL + G S R Y HC+ +
Sbjct: 413 KKLVGNKVLMASVKGPDRSKFRVYLHCTNTK 443
>sp|Q9Y251|HPSE_HUMAN Heparanase OS=Homo sapiens GN=HPSE PE=1 SV=2
Length = 543
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 128/267 (47%), Gaps = 21/267 (7%)
Query: 150 FGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNEL-SGRTSIGASV 208
FGLNAL +++ W+S+NA+ L Y S GY I SWE GNE S +
Sbjct: 186 FGLNALLRTADLQ-------WNSSNAQLLLDYCSSKGYNI-SWELGNEPNSFLKKADIFI 237
Query: 209 DAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQV---SGSNVVNGVT 265
+ G+D I L + L K++ + P + AK L+ +G V++ VT
Sbjct: 238 NGSQLGEDFIQLHKL---LRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVT 294
Query: 266 HHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGG 325
H Y L LNP L + + Q +E P W+GE+ AY G
Sbjct: 295 WHHYYLNGRTATK--EDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGGA 352
Query: 326 RHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVG-GNYGLLNATTFIPNPDYYSALLWH 384
+S+TF F +LD+LG+S++ +V RQ G GNY L++ F P PDY+ +LL+
Sbjct: 353 PLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDE-NFDPLPDYWLSLLFK 411
Query: 385 RLMGKGVLSVATDGSS--SLRSYAHCS 409
+L+G VL + GS LR Y HC+
Sbjct: 412 KLVGTKVLMASVQGSKRRKLRVYLHCT 438
>sp|Q71RP1|HPSE_RAT Heparanase OS=Rattus norvegicus GN=Hpse PE=2 SV=1
Length = 536
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 136/281 (48%), Gaps = 19/281 (6%)
Query: 135 DELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEY 194
D L +R + FGLNAL ++R W+S+NA+ L Y S GY I SWE
Sbjct: 164 DMLYSFAKCSRLDLIFGLNALLRTPDLR-------WNSSNAQLLLNYCSSKGYNI-SWEL 215
Query: 195 GNELSGR-TSIGASVDAELYGKDLINLKNIINE-LYKNSS-SKPTILAPGGFFDQEWYAK 251
GNE + S+D G+D + L ++ + ++N+ P I P G +
Sbjct: 216 GNEPNSFWKKAHISIDGLQLGEDFVELHKLLQKSAFQNAKLYGPDIGQPRGK-TVKLLRS 274
Query: 252 FLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWAS 311
FL+ +G V++ +T H Y L V L+ L + + + ++ P
Sbjct: 275 FLK-AGGEVIDSLTWHHYYLNGRVATK--EDFLSSDVLDTFILSVQKILKVTKEMTPGKK 331
Query: 312 AWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVG-GNYGLLNATT 370
W+GE+ AY G +S+TF F +LD+LG+S++ +V RQ G GNY L++
Sbjct: 332 VWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSAQLGIEVVMRQVFFGAGNYHLVDE-N 390
Query: 371 FIPNPDYYSALLWHRLMGKGVLSVATDGS--SSLRSYAHCS 409
F P PDY+ +LL+ +L+G VL G S LR Y HC+
Sbjct: 391 FEPLPDYWLSLLFKKLVGPKVLMSRVKGPDRSKLRVYLHCT 431
>sp|Q6YGZ1|HPSE_MOUSE Heparanase OS=Mus musculus GN=Hpse PE=1 SV=3
Length = 535
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)
Query: 150 FGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGR-TSIGASV 208
FGLNAL ++R W+S+NA+ L Y S GY I SWE GNE + +
Sbjct: 178 FGLNALLRTPDLR-------WNSSNAQLLLDYCSSKGYNI-SWELGNEPNSFWKKAHILI 229
Query: 209 DAELYGKDLINLKNIINE-LYKNSS-SKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTH 266
D G+D + L ++ ++N+ P I P G + FL+ +G V++ +T
Sbjct: 230 DGLQLGEDFVELHKLLQRSAFQNAKLYGPDIGQPRGK-TVKLLRSFLK-AGGEVIDSLTW 287
Query: 267 HIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGR 326
H Y L + L+ L + + + ++ P W+GE+ AY G
Sbjct: 288 HHYYLNGRIATK--EDFLSSDVLDTFILSVQKILKVTKEITPGKKVWLGETSSAYGGGAP 345
Query: 327 HVSNTFVNSFWYLDQLGMSSKYNTKVYCRQTLVG-GNYGLLNATTFIPNPDYYSALLWHR 385
+SNTF F +LD+LG+S++ +V RQ G GNY L++ F P PDY+ +LL+ +
Sbjct: 346 LLSNTFAAGFMWLDKLGLSAQMGIEVVMRQVFFGAGNYHLVDE-NFEPLPDYWLSLLFKK 404
Query: 386 LMGKGVLSVATDGS--SSLRSYAHCS 409
L+G VL G S LR Y HC+
Sbjct: 405 LVGPRVLLSRVKGPDRSKLRVYLHCT 430
>sp|Q8WWQ2|HPSE2_HUMAN Inactive heparanase-2 OS=Homo sapiens GN=HPSE2 PE=1 SV=3
Length = 592
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 108/249 (43%), Gaps = 28/249 (11%)
Query: 180 KYTISMGYQIDSWEYGNELSG-RTSIGASVDAELYGKDLINLKNIINELYKNSSSK---P 235
KY+ S Y I SWE GNE + RT G +V+ GKD I LK+++ + S + P
Sbjct: 246 KYSASKKYNI-SWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRASLYGP 304
Query: 236 TILAPG----GFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSR 291
I P D F++V+GS V H Y G V V L + L
Sbjct: 305 NIGRPRKNVIALLD-----GFMKVAGSTVDAVTWQHCYIDGRVVK---VMDFLKTRLLDT 356
Query: 292 VSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTK 351
+S+ +++ + + P W+ G ++S+++ F +L+ LGM +
Sbjct: 357 LSDQIRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGID 416
Query: 352 VYCRQTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDG-----------SS 400
V R + Y L F P PDY+ +LL+ RL+G VL+V G
Sbjct: 417 VVIRHSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRD 476
Query: 401 SLRSYAHCS 409
LR YAHC+
Sbjct: 477 KLRIYAHCT 485
>sp|B2RY83|HPSE2_MOUSE Inactive heparanase-2 OS=Mus musculus GN=Hpse2 PE=2 SV=1
Length = 592
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 108/249 (43%), Gaps = 28/249 (11%)
Query: 180 KYTISMGYQIDSWEYGNELSGRTSI-GASVDAELYGKDLINLKNIINELYKNSSSK---P 235
KY+ S Y I SWE GNE + SI G +V+ GKD I LK+++ + S + P
Sbjct: 246 KYSASKKYNI-SWELGNEPNNYRSIHGRAVNGSQLGKDYIQLKSLLQPIRVYSRASLYGP 304
Query: 236 TILAPG----GFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSR 291
I P D F++V+GS V H Y G V V L + L
Sbjct: 305 NIGRPRKNVIALLD-----GFMKVAGSTVDAVTWQHCYIDGRVVK---VMDFLKTRLLDT 356
Query: 292 VSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFWYLDQLGMSSKYNTK 351
+S+ +++ + + P W+ G ++S+++ F +L+ LGM +
Sbjct: 357 LSDQIRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGID 416
Query: 352 VYCRQTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDG-----------SS 400
V R + Y L F P PDY+ +LL+ RL+G VL+V G
Sbjct: 417 VVIRHSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRD 476
Query: 401 SLRSYAHCS 409
LR YAHC+
Sbjct: 477 KLRIYAHCT 485
>sp|C5CXH6|HISZ_VARPS ATP phosphoribosyltransferase regulatory subunit OS=Variovorax
paradoxus (strain S110) GN=hisZ PE=3 SV=1
Length = 386
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 63 WGNSSVINLDLSH----PLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMK 118
+G++SV++ P ++ A+ + L +G Q+ +D+ DL+ + + M+
Sbjct: 218 YGDASVLDEAAKALKGTPAVSAALAGLKQLAASLGADPARQISFDLADLRGYAY-YSGMR 276
Query: 119 DGLF--GFSKGCLHMQRWDELNQLFNRTRAIVSFGLN 153
G++ G + + R+DE+ +F R R V F L+
Sbjct: 277 FGIYVPGAADALVRGGRYDEVGAVFGRNRPAVGFSLD 313
>sp|P19263|MED14_YEAST Mediator of RNA polymerase II transcription subunit 14
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RGR1 PE=1 SV=2
Length = 1082
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 34/145 (23%)
Query: 4 FLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPW 63
FL L I+L + ++ + V T+T+ N+ H + ++W+ N N+C W
Sbjct: 130 FLQLIIFLRTQF--------LKLYVLVKWTRTIKQNNFHVLIDLLNWFRTTNMNVNNCIW 181
Query: 64 GNSSVINLDLSHPLLANA--IQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFR------ 115
S +N +++ L N + A + L +G P H F+
Sbjct: 182 ALKSSLN-SMTNAKLPNVDLVTALEVL--------------SLGRPNLPTHNFKLSGVSN 226
Query: 116 --KMKDGLFGFSKGCLHMQRWDELN 138
M DG+ G + +QR +LN
Sbjct: 227 SMDMVDGMAKVPIGLI-LQRLKDLN 250
>sp|Q9JLB4|CUBN_MOUSE Cubilin OS=Mus musculus GN=Cubn PE=1 SV=3
Length = 3623
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 343 GMSSKYNTKVYCRQTLVGGNYGLLNATTFIPNPDYYSALLWHRLMGKGVLSVATDGSSSL 402
G ++++ K+ ++ GNYG + + + N +W+ L+ G L T G+ SL
Sbjct: 578 GFTARWEAKLPECGGILTGNYGSITSPGYPGNYPPGRDCVWNLLVSPGSLITFTFGTLSL 637
Query: 403 RSYAHCSKERLT----PLASQYLVGK 424
S+ CSK+ L P ++GK
Sbjct: 638 ESHNDCSKDYLEIRDGPFHHDPILGK 663
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,325,066
Number of Sequences: 539616
Number of extensions: 7274155
Number of successful extensions: 15639
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 15608
Number of HSP's gapped (non-prelim): 19
length of query: 435
length of database: 191,569,459
effective HSP length: 120
effective length of query: 315
effective length of database: 126,815,539
effective search space: 39946894785
effective search space used: 39946894785
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)