Query 013839
Match_columns 435
No_of_seqs 179 out of 2000
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 07:54:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013839.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013839hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 1.2E-59 2.6E-64 425.7 39.3 394 25-419 1-395 (396)
2 PLN02397 aspartate transaminas 100.0 4.3E-57 9.3E-62 443.8 45.2 400 22-421 20-420 (423)
3 PTZ00376 aspartate aminotransf 100.0 4.7E-57 1E-61 442.5 44.0 398 24-421 3-402 (404)
4 PRK09257 aromatic amino acid a 100.0 8.5E-56 1.8E-60 433.0 43.5 394 26-420 2-396 (396)
5 COG0436 Aspartate/tyrosine/aro 100.0 8.2E-57 1.8E-61 433.9 35.5 345 50-422 28-391 (393)
6 KOG1411 Aspartate aminotransfe 100.0 2.4E-53 5.1E-58 376.2 29.8 401 21-421 23-424 (427)
7 KOG1412 Aspartate aminotransfe 100.0 5.4E-52 1.2E-56 362.6 36.8 402 22-424 2-407 (410)
8 KOG0257 Kynurenine aminotransf 100.0 1.6E-51 3.4E-56 376.5 25.4 365 26-417 9-414 (420)
9 PLN00175 aminotransferase fami 100.0 5E-50 1.1E-54 392.9 35.0 363 22-421 29-412 (413)
10 PRK08636 aspartate aminotransf 100.0 1E-48 2.2E-53 383.6 34.8 347 48-422 31-400 (403)
11 PLN02187 rooty/superroot1 100.0 3.6E-48 7.9E-53 383.5 36.9 358 47-425 63-441 (462)
12 PRK07366 succinyldiaminopimela 100.0 1.3E-48 2.9E-53 381.5 33.3 342 48-419 28-387 (388)
13 PRK07681 aspartate aminotransf 100.0 2.2E-48 4.7E-53 381.0 34.0 338 48-418 30-384 (399)
14 PTZ00377 alanine aminotransfer 100.0 5.6E-48 1.2E-52 385.7 36.5 365 48-426 44-479 (481)
15 PRK06348 aspartate aminotransf 100.0 3.1E-48 6.6E-53 378.1 33.3 353 33-419 14-382 (384)
16 PRK06207 aspartate aminotransf 100.0 4.7E-48 1E-52 378.5 34.5 345 50-423 39-403 (405)
17 PLN00145 tyrosine/nicotianamin 100.0 9.8E-48 2.1E-52 378.0 36.8 355 49-424 51-426 (430)
18 PRK13355 bifunctional HTH-doma 100.0 7.4E-48 1.6E-52 387.9 35.8 374 26-423 120-515 (517)
19 PRK06855 aminotransferase; Val 100.0 1.6E-47 3.5E-52 377.4 36.7 356 48-422 30-429 (433)
20 PLN00143 tyrosine/nicotianamin 100.0 1.3E-47 2.8E-52 375.9 35.1 363 41-424 23-406 (409)
21 PLN02231 alanine transaminase 100.0 3.2E-47 7E-52 380.4 37.9 360 48-427 127-532 (534)
22 PRK08068 transaminase; Reviewe 100.0 1.4E-47 3.1E-52 374.2 33.6 340 48-418 30-385 (389)
23 PLN02656 tyrosine transaminase 100.0 3.6E-47 7.9E-52 373.0 36.2 364 35-423 15-404 (409)
24 PRK09147 succinyldiaminopimela 100.0 4.2E-47 9.1E-52 371.8 35.4 342 47-421 26-395 (396)
25 PRK07682 hypothetical protein; 100.0 2E-47 4.4E-52 372.0 33.0 341 50-423 20-377 (378)
26 PRK09148 aminotransferase; Val 100.0 3.8E-47 8.1E-52 372.4 35.0 347 48-425 28-393 (405)
27 PRK12414 putative aminotransfe 100.0 2.2E-47 4.8E-52 371.8 32.1 355 26-418 8-383 (384)
28 PRK05942 aspartate aminotransf 100.0 4.6E-47 1E-51 371.0 34.2 340 48-418 33-388 (394)
29 TIGR03540 DapC_direct LL-diami 100.0 5.2E-47 1.1E-51 369.8 34.2 340 48-418 27-382 (383)
30 PRK09276 LL-diaminopimelate am 100.0 4E-47 8.7E-52 370.8 33.4 339 48-418 29-384 (385)
31 PRK06107 aspartate aminotransf 100.0 5.1E-47 1.1E-51 371.5 34.1 345 48-423 31-401 (402)
32 PRK07324 transaminase; Validat 100.0 3.7E-47 8.1E-52 368.4 31.1 334 48-422 24-370 (373)
33 PRK08912 hypothetical protein; 100.0 1.4E-46 2.9E-51 367.2 34.0 341 49-422 25-386 (387)
34 TIGR01264 tyr_amTase_E tyrosin 100.0 1.4E-46 3.1E-51 368.6 34.3 365 35-423 14-400 (401)
35 PRK06290 aspartate aminotransf 100.0 2.3E-46 5E-51 366.1 34.5 343 48-423 42-406 (410)
36 PRK08960 hypothetical protein; 100.0 1.7E-46 3.6E-51 366.4 33.2 340 48-421 30-386 (387)
37 COG1167 ARO8 Transcriptional r 100.0 2.2E-46 4.7E-51 369.4 33.9 349 48-424 87-457 (459)
38 PTZ00433 tyrosine aminotransfe 100.0 3.6E-46 7.9E-51 366.4 34.9 364 39-424 21-410 (412)
39 PRK07683 aminotransferase A; V 100.0 3.3E-46 7.1E-51 364.0 34.2 340 49-422 27-383 (387)
40 PRK07309 aromatic amino acid a 100.0 5E-46 1.1E-50 363.2 35.1 342 50-423 30-389 (391)
41 PLN02450 1-aminocyclopropane-1 100.0 3.7E-46 8.1E-51 369.7 34.0 348 50-424 38-432 (468)
42 PRK05957 aspartate aminotransf 100.0 6.8E-46 1.5E-50 362.0 34.8 344 50-424 27-387 (389)
43 PRK07337 aminotransferase; Val 100.0 7.1E-46 1.5E-50 362.3 33.2 338 48-420 28-387 (388)
44 TIGR03538 DapC_gpp succinyldia 100.0 1.1E-45 2.5E-50 361.3 34.6 339 48-419 26-392 (393)
45 PRK09082 methionine aminotrans 100.0 3.9E-46 8.4E-51 363.5 30.8 347 37-418 19-385 (386)
46 PRK06108 aspartate aminotransf 100.0 1.5E-45 3.2E-50 359.8 33.7 343 49-421 23-381 (382)
47 PRK08637 hypothetical protein; 100.0 7.1E-45 1.5E-49 354.7 38.2 357 50-423 3-387 (388)
48 PLN02607 1-aminocyclopropane-1 100.0 3.2E-45 6.9E-50 360.3 35.5 351 50-427 47-442 (447)
49 KOG0259 Tyrosine aminotransfer 100.0 4.2E-45 9E-50 328.3 32.7 355 50-426 61-437 (447)
50 PRK07777 aminotransferase; Val 100.0 3.7E-45 8E-50 357.1 34.7 357 29-420 6-384 (387)
51 PLN02376 1-aminocyclopropane-1 100.0 4.1E-45 9E-50 363.3 35.2 368 33-424 23-440 (496)
52 PRK08175 aminotransferase; Val 100.0 5.5E-45 1.2E-49 356.5 34.7 344 48-422 27-389 (395)
53 PRK07590 L,L-diaminopimelate a 100.0 2.7E-45 5.9E-50 360.1 32.5 344 39-419 22-408 (409)
54 PRK08361 aspartate aminotransf 100.0 2.3E-45 5E-50 358.9 31.7 342 50-422 33-390 (391)
55 PRK09265 aminotransferase AlaT 100.0 1.4E-44 3E-49 354.7 36.7 353 48-423 31-402 (404)
56 PRK05764 aspartate aminotransf 100.0 1.1E-44 2.3E-49 355.0 34.4 368 24-423 3-392 (393)
57 TIGR01265 tyr_nico_aTase tyros 100.0 1.8E-44 4E-49 353.6 35.5 366 36-422 15-401 (403)
58 PRK09275 aspartate aminotransf 100.0 2E-45 4.4E-50 362.3 28.7 344 50-426 100-521 (527)
59 PRK07550 hypothetical protein; 100.0 1.3E-44 2.9E-49 353.1 34.3 341 48-419 27-384 (386)
60 PRK15481 transcriptional regul 100.0 4.8E-45 1E-49 360.8 30.7 330 50-421 85-430 (431)
61 PLN02368 alanine transaminase 100.0 1.3E-44 2.9E-49 351.4 31.7 333 37-384 26-404 (407)
62 PRK08363 alanine aminotransfer 100.0 5.1E-44 1.1E-48 350.2 34.6 350 48-422 28-394 (398)
63 PRK05839 hypothetical protein; 100.0 3.6E-44 7.8E-49 347.8 32.3 340 39-421 13-373 (374)
64 TIGR03537 DapC succinyldiamino 100.0 5.2E-44 1.1E-48 344.2 32.2 329 52-418 2-349 (350)
65 TIGR03801 asp_4_decarbox aspar 100.0 6.9E-44 1.5E-48 350.9 29.4 341 50-425 94-519 (521)
66 PRK07568 aspartate aminotransf 100.0 4E-43 8.6E-48 344.3 34.5 343 49-424 29-394 (397)
67 PRK07865 N-succinyldiaminopime 100.0 3.5E-43 7.5E-48 340.4 31.9 345 25-417 3-363 (364)
68 PF00155 Aminotran_1_2: Aminot 100.0 5.2E-44 1.1E-48 346.7 26.2 344 51-416 2-363 (363)
69 TIGR03542 DAPAT_plant LL-diami 100.0 4.6E-43 9.9E-48 343.6 32.3 346 39-419 21-401 (402)
70 PRK02610 histidinol-phosphate 100.0 4.7E-42 1E-46 333.2 33.6 333 50-423 28-372 (374)
71 PRK01533 histidinol-phosphate 100.0 2.7E-42 5.8E-47 333.0 29.4 330 48-427 27-360 (366)
72 TIGR03539 DapC_actino succinyl 100.0 4.9E-42 1.1E-46 331.2 31.0 332 37-416 9-356 (357)
73 PRK09440 avtA valine--pyruvate 100.0 9.3E-42 2E-46 336.3 33.2 346 49-425 29-414 (416)
74 COG1168 MalY Bifunctional PLP- 100.0 5.4E-41 1.2E-45 304.4 32.6 345 49-422 24-386 (388)
75 PRK06836 aspartate aminotransf 100.0 2.6E-41 5.7E-46 330.3 33.0 338 49-423 32-392 (394)
76 PRK14809 histidinol-phosphate 100.0 8.1E-41 1.8E-45 323.0 33.0 330 37-421 18-356 (357)
77 KOG0256 1-aminocyclopropane-1- 100.0 1.1E-40 2.3E-45 302.6 29.0 320 85-425 114-464 (471)
78 PRK03317 histidinol-phosphate 100.0 1E-40 2.3E-45 323.5 31.2 330 51-422 27-364 (368)
79 PRK06358 threonine-phosphate d 100.0 4.3E-40 9.3E-45 317.0 33.8 333 39-420 9-353 (354)
80 PRK05166 histidinol-phosphate 100.0 5.3E-40 1.2E-44 318.7 31.9 325 48-420 34-369 (371)
81 PRK09105 putative aminotransfe 100.0 7.7E-40 1.7E-44 316.5 31.5 316 50-420 43-368 (370)
82 PLN02672 methionine S-methyltr 100.0 1.1E-39 2.5E-44 339.6 34.0 344 48-421 695-1079(1082)
83 PLN03026 histidinol-phosphate 100.0 1.8E-39 3.8E-44 315.3 33.2 317 48-419 50-379 (380)
84 PRK03158 histidinol-phosphate 100.0 7.2E-40 1.6E-44 316.9 30.3 319 50-419 29-358 (359)
85 PRK04870 histidinol-phosphate 100.0 1.4E-39 3.1E-44 314.3 30.7 320 49-419 25-355 (356)
86 PRK06225 aspartate aminotransf 100.0 4.6E-39 1E-43 313.4 34.5 336 48-424 26-378 (380)
87 PRK05387 histidinol-phosphate 100.0 1.2E-39 2.5E-44 314.8 29.9 317 50-421 24-352 (353)
88 PRK08153 histidinol-phosphate 100.0 2.2E-39 4.9E-44 313.7 31.3 322 49-423 31-366 (369)
89 PRK08056 threonine-phosphate d 100.0 5.8E-39 1.3E-43 309.6 33.8 336 35-421 6-354 (356)
90 COG0079 HisC Histidinol-phosph 100.0 4.7E-39 1E-43 305.0 31.3 321 50-422 22-354 (356)
91 PRK07392 threonine-phosphate d 100.0 6.4E-39 1.4E-43 310.0 31.2 323 48-421 20-358 (360)
92 KOG0634 Aromatic amino acid am 100.0 5E-39 1.1E-43 294.1 28.1 323 85-424 93-468 (472)
93 PRK14807 histidinol-phosphate 100.0 2.6E-38 5.7E-43 304.5 32.3 319 50-420 22-350 (351)
94 PRK14808 histidinol-phosphate 100.0 3.1E-38 6.7E-43 301.4 31.1 312 48-419 17-334 (335)
95 PRK06959 putative threonine-ph 100.0 1.3E-37 2.9E-42 297.3 32.7 306 50-424 24-335 (339)
96 PRK04781 histidinol-phosphate 100.0 5.3E-38 1.1E-42 303.4 29.8 297 85-420 53-361 (364)
97 PRK02731 histidinol-phosphate 100.0 1.7E-37 3.8E-42 301.2 32.4 324 48-421 30-365 (367)
98 PRK03967 histidinol-phosphate 100.0 1.1E-37 2.5E-42 298.1 29.9 310 50-422 18-334 (337)
99 PRK01688 histidinol-phosphate 100.0 5.2E-38 1.1E-42 302.1 26.6 310 51-416 29-350 (351)
100 PRK05664 threonine-phosphate d 100.0 3.1E-37 6.6E-42 294.3 31.5 301 50-422 20-328 (330)
101 PRK03321 putative aminotransfe 100.0 8.4E-38 1.8E-42 301.6 27.9 323 50-421 22-350 (352)
102 PRK07908 hypothetical protein; 100.0 5.3E-37 1.1E-41 295.5 33.3 316 48-421 20-346 (349)
103 PRK06425 histidinol-phosphate 100.0 2.3E-37 4.9E-42 295.6 29.2 303 51-420 17-331 (332)
104 PRK04635 histidinol-phosphate 100.0 1.9E-37 4.1E-42 298.9 26.7 311 50-418 31-351 (354)
105 TIGR01141 hisC histidinol-phos 100.0 6.7E-37 1.5E-41 294.7 28.5 317 50-417 19-346 (346)
106 PRK00950 histidinol-phosphate 100.0 2.4E-36 5.2E-41 292.6 30.3 324 37-420 22-360 (361)
107 TIGR01140 L_thr_O3P_dcar L-thr 100.0 2.6E-36 5.6E-41 288.0 28.2 314 36-416 4-329 (330)
108 PRK08354 putative aminotransfe 100.0 4.2E-35 9E-40 277.4 30.6 294 49-419 7-309 (311)
109 PRK13238 tnaA tryptophanase/L- 100.0 1.4E-32 3.1E-37 270.5 30.0 349 36-422 23-433 (460)
110 COG3977 Alanine-alpha-ketoisov 100.0 1.9E-32 4.1E-37 239.2 25.7 362 37-426 16-415 (417)
111 cd00609 AAT_like Aspartate ami 100.0 1.4E-31 3.1E-36 258.0 31.7 332 53-417 1-349 (350)
112 KOG0258 Alanine aminotransfera 100.0 6.3E-31 1.4E-35 237.4 29.0 340 68-423 87-470 (475)
113 cd00617 Tnase_like Tryptophana 100.0 3.3E-28 7.1E-33 236.2 27.4 333 48-422 9-408 (431)
114 TIGR01822 2am3keto_CoA 2-amino 100.0 2.3E-27 5E-32 232.4 32.7 327 48-424 36-391 (393)
115 PRK10534 L-threonine aldolase; 100.0 5.2E-28 1.1E-32 231.6 26.7 317 52-421 1-332 (333)
116 PRK06939 2-amino-3-ketobutyrat 100.0 8.4E-28 1.8E-32 236.0 28.8 332 48-423 40-394 (397)
117 PLN02822 serine palmitoyltrans 100.0 7.7E-28 1.7E-32 239.1 27.3 328 48-423 107-478 (481)
118 PLN02483 serine palmitoyltrans 100.0 4.1E-27 8.9E-32 234.3 31.8 376 2-424 55-468 (489)
119 PF12897 Aminotran_MocR: Alani 100.0 4.2E-27 9.2E-32 214.5 28.8 317 84-424 60-417 (425)
120 TIGR00858 bioF 8-amino-7-oxono 100.0 5.8E-27 1.2E-31 227.0 29.1 322 48-417 14-360 (360)
121 TIGR01825 gly_Cac_T_rel pyrido 100.0 8.3E-27 1.8E-31 227.9 30.3 331 48-423 31-382 (385)
122 TIGR03576 pyridox_MJ0158 pyrid 100.0 1.2E-26 2.5E-31 221.4 29.2 273 92-420 54-345 (346)
123 TIGR00707 argD acetylornithine 100.0 2.7E-26 5.7E-31 223.9 28.3 334 48-420 25-379 (379)
124 KOG0633 Histidinol phosphate a 100.0 7.5E-27 1.6E-31 200.4 17.9 275 112-419 83-374 (375)
125 PLN02721 threonine aldolase 99.9 1.6E-25 3.5E-30 216.3 29.5 323 51-421 6-351 (353)
126 PRK13392 5-aminolevulinate syn 99.9 1.3E-25 2.8E-30 221.0 29.1 329 49-424 45-399 (410)
127 PRK05958 8-amino-7-oxononanoat 99.9 2.1E-25 4.6E-30 218.0 29.6 323 48-419 37-384 (385)
128 PRK02627 acetylornithine amino 99.9 1.4E-25 3.1E-30 220.0 27.9 335 48-422 37-394 (396)
129 TIGR03392 FeS_syn_CsdA cystein 99.9 4.4E-25 9.5E-30 216.5 29.8 286 94-423 62-396 (398)
130 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.5E-25 5.4E-30 215.7 27.2 285 94-422 53-368 (370)
131 PRK10874 cysteine sulfinate de 99.9 3.9E-25 8.4E-30 217.1 28.7 286 94-423 65-399 (401)
132 cd06502 TA_like Low-specificit 99.9 5.3E-25 1.1E-29 211.4 26.5 307 69-418 10-337 (338)
133 cd00378 SHMT Serine-glycine hy 99.9 4.2E-25 9E-30 217.1 24.4 326 50-424 19-387 (402)
134 PRK03244 argD acetylornithine 99.9 9.3E-25 2E-29 214.1 26.3 331 48-424 41-396 (398)
135 PRK01278 argD acetylornithine 99.9 9.5E-25 2E-29 213.4 26.3 340 47-422 28-388 (389)
136 cd06454 KBL_like KBL_like; thi 99.9 1.8E-24 3.8E-29 208.7 26.9 281 92-419 46-348 (349)
137 PRK07049 methionine gamma-lyas 99.9 8.3E-24 1.8E-28 207.2 30.7 223 88-357 80-312 (427)
138 PRK07179 hypothetical protein; 99.9 1.4E-23 3E-28 206.4 31.8 327 47-423 51-399 (407)
139 PLN02242 methionine gamma-lyas 99.9 6.2E-24 1.3E-28 207.3 28.3 214 92-357 76-298 (418)
140 TIGR01979 sufS cysteine desulf 99.9 1E-23 2.3E-28 207.3 29.6 289 93-423 63-402 (403)
141 PRK09295 bifunctional cysteine 99.9 1.2E-23 2.6E-28 206.8 28.5 286 94-421 69-403 (406)
142 PRK02948 cysteine desulfurase; 99.9 5.3E-24 1.2E-28 207.7 25.5 288 94-426 45-378 (381)
143 PRK13479 2-aminoethylphosphona 99.9 4E-23 8.6E-28 200.6 30.7 317 65-424 12-365 (368)
144 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.8E-23 6E-28 200.9 28.5 312 64-419 5-354 (355)
145 PRK05093 argD bifunctional N-s 99.9 2.4E-23 5.1E-28 204.2 27.7 330 47-422 37-400 (403)
146 TIGR00713 hemL glutamate-1-sem 99.9 5.1E-23 1.1E-27 203.2 29.7 339 47-422 45-422 (423)
147 cd00610 OAT_like Acetyl ornith 99.9 1.7E-23 3.7E-28 206.5 26.3 338 48-420 34-413 (413)
148 TIGR01821 5aminolev_synth 5-am 99.9 7.9E-23 1.7E-27 200.7 30.6 326 50-424 45-398 (402)
149 cd06451 AGAT_like Alanine-glyo 99.9 7.8E-23 1.7E-27 197.8 29.4 284 94-420 34-355 (356)
150 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 3.5E-23 7.6E-28 200.3 26.6 281 94-420 46-360 (361)
151 PRK02936 argD acetylornithine 99.9 7.1E-23 1.5E-27 199.4 28.6 336 47-420 26-377 (377)
152 PLN02855 Bifunctional selenocy 99.9 9.7E-23 2.1E-27 201.4 28.7 289 94-424 78-420 (424)
153 PRK09064 5-aminolevulinate syn 99.9 2.7E-22 5.8E-27 197.3 31.5 328 49-424 45-399 (407)
154 cd00613 GDC-P Glycine cleavage 99.9 4.6E-23 1E-27 202.4 25.4 317 50-416 20-398 (398)
155 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.3E-22 2.8E-27 199.1 27.7 292 87-416 51-397 (397)
156 PLN02409 serine--glyoxylate am 99.9 2.1E-22 4.6E-27 197.0 29.0 295 92-424 38-374 (401)
157 PLN03227 serine palmitoyltrans 99.9 3.2E-22 6.9E-27 194.7 29.2 333 53-423 1-383 (392)
158 TIGR02326 transamin_PhnW 2-ami 99.9 3.3E-22 7.2E-27 193.8 28.6 287 94-421 37-361 (363)
159 PRK06234 methionine gamma-lyas 99.9 5.2E-22 1.1E-26 193.5 29.9 215 90-357 62-285 (400)
160 TIGR03403 nifS_epsilon cystein 99.9 8.4E-23 1.8E-27 199.3 24.3 293 92-424 39-377 (382)
161 PRK13393 5-aminolevulinate syn 99.9 1.9E-21 4.1E-26 191.1 32.3 332 49-424 44-398 (406)
162 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 7.8E-22 1.7E-26 192.3 29.1 288 93-424 64-383 (387)
163 cd06453 SufS_like Cysteine des 99.9 2.3E-22 4.9E-27 195.8 25.0 280 93-416 44-373 (373)
164 PRK08088 4-aminobutyrate amino 99.9 5.7E-22 1.2E-26 195.3 27.6 345 47-423 38-424 (425)
165 PRK04260 acetylornithine amino 99.9 1E-21 2.2E-26 190.9 29.0 330 48-419 27-374 (375)
166 PRK04073 rocD ornithine--oxo-a 99.9 1.2E-21 2.6E-26 191.7 28.9 328 47-420 37-395 (396)
167 PRK12381 bifunctional succinyl 99.9 9.7E-22 2.1E-26 192.7 27.3 339 47-424 36-401 (406)
168 PRK06460 hypothetical protein; 99.9 2.5E-21 5.5E-26 187.2 29.3 214 91-357 44-262 (376)
169 PRK08247 cystathionine gamma-s 99.9 3.5E-21 7.7E-26 185.9 29.9 271 92-422 52-364 (366)
170 cd06450 DOPA_deC_like DOPA dec 99.9 8.1E-22 1.8E-26 189.9 22.9 301 67-418 9-344 (345)
171 PRK08249 cystathionine gamma-s 99.9 6.7E-21 1.5E-25 185.2 29.4 214 92-357 64-281 (398)
172 PRK07504 O-succinylhomoserine 99.9 1.1E-20 2.4E-25 183.9 30.8 213 93-357 66-283 (398)
173 TIGR03402 FeS_nifS cysteine de 99.9 6.2E-21 1.3E-25 186.0 27.3 287 94-424 44-374 (379)
174 PRK06767 methionine gamma-lyas 99.9 1.1E-20 2.3E-25 183.7 28.5 274 92-421 61-384 (386)
175 PRK00854 rocD ornithine--oxo-a 99.9 2.1E-20 4.5E-25 183.6 30.8 329 48-421 39-400 (401)
176 PRK13520 L-tyrosine decarboxyl 99.9 1.2E-20 2.5E-25 183.7 28.7 291 95-421 62-370 (371)
177 PRK00011 glyA serine hydroxyme 99.9 6.6E-21 1.4E-25 188.0 26.5 265 123-422 93-389 (416)
178 TIGR02080 O_succ_thio_ly O-suc 99.9 2.7E-20 5.8E-25 180.1 29.9 217 92-357 51-269 (382)
179 PRK08133 O-succinylhomoserine 99.9 3.6E-20 7.7E-25 180.1 30.2 212 94-357 63-278 (390)
180 PRK08045 cystathionine gamma-s 99.9 3.3E-20 7.1E-25 179.6 29.8 214 92-357 52-270 (386)
181 TIGR01437 selA_rel uncharacter 99.9 1.7E-20 3.8E-25 180.7 27.3 298 67-419 23-362 (363)
182 PRK00451 glycine dehydrogenase 99.9 9.6E-21 2.1E-25 188.5 26.1 262 115-420 129-446 (447)
183 PRK07582 cystathionine gamma-l 99.9 2.9E-20 6.3E-25 179.2 27.8 274 90-422 49-365 (366)
184 TIGR01977 am_tr_V_EF2568 cyste 99.9 2E-20 4.2E-25 182.4 25.9 285 92-418 44-375 (376)
185 PRK08776 cystathionine gamma-s 99.9 5.3E-20 1.1E-24 179.2 28.0 212 94-357 62-278 (405)
186 TIGR03812 tyr_de_CO2_Arch tyro 99.9 4.5E-20 9.7E-25 179.7 27.5 290 95-418 62-372 (373)
187 cd00614 CGS_like CGS_like: Cys 99.9 7.9E-20 1.7E-24 176.9 28.2 216 90-357 38-258 (369)
188 COG0520 csdA Selenocysteine ly 99.9 6.8E-20 1.5E-24 177.1 27.6 287 93-421 67-404 (405)
189 PRK07811 cystathionine gamma-s 99.9 1.3E-19 2.8E-24 176.0 29.6 216 90-357 59-279 (388)
190 PTZ00125 ornithine aminotransf 99.9 8.8E-20 1.9E-24 179.2 28.7 280 117-424 90-397 (400)
191 COG1104 NifS Cysteine sulfinat 99.9 2.2E-20 4.7E-25 174.0 22.6 299 93-427 45-382 (386)
192 PRK07503 methionine gamma-lyas 99.9 1.3E-19 2.9E-24 176.7 28.8 212 93-357 66-284 (403)
193 TIGR01328 met_gam_lyase methio 99.9 1.2E-19 2.7E-24 176.2 27.8 213 93-357 60-278 (391)
194 PRK07505 hypothetical protein; 99.9 2.8E-19 6E-24 175.5 30.0 355 8-422 13-399 (402)
195 PRK08861 cystathionine gamma-s 99.9 3.8E-19 8.1E-24 171.7 30.0 214 92-357 53-271 (388)
196 PLN00144 acetylornithine trans 99.9 2.1E-19 4.5E-24 174.4 27.9 336 47-422 12-380 (382)
197 TIGR03246 arg_catab_astC succi 99.9 1.7E-19 3.8E-24 176.3 27.4 329 48-422 33-395 (397)
198 TIGR02006 IscS cysteine desulf 99.9 4.4E-20 9.6E-25 181.1 23.3 286 93-424 48-379 (402)
199 TIGR01325 O_suc_HS_sulf O-succ 99.9 3.1E-19 6.8E-24 173.1 28.6 212 93-357 55-271 (380)
200 PRK08574 cystathionine gamma-s 99.9 4.4E-19 9.6E-24 171.8 29.3 213 92-357 53-270 (385)
201 PRK09792 4-aminobutyrate trans 99.9 5.5E-19 1.2E-23 173.5 30.3 337 47-421 37-420 (421)
202 PRK07810 O-succinylhomoserine 99.9 3.7E-19 8E-24 173.3 28.5 214 92-357 70-288 (403)
203 COG0075 Serine-pyruvate aminot 99.9 1.1E-18 2.3E-23 164.1 30.0 278 120-425 59-366 (383)
204 PLN02955 8-amino-7-oxononanoat 99.9 7E-19 1.5E-23 170.7 29.7 326 50-426 102-465 (476)
205 PRK07269 cystathionine gamma-s 99.9 4.1E-19 8.9E-24 170.6 27.7 275 92-421 54-363 (364)
206 PRK07050 cystathionine beta-ly 99.9 6.1E-19 1.3E-23 171.4 28.6 214 92-357 65-283 (394)
207 PRK14012 cysteine desulfurase; 99.9 9.7E-20 2.1E-24 178.9 23.2 287 93-425 50-382 (404)
208 PRK06918 4-aminobutyrate amino 99.9 5.8E-19 1.3E-23 175.0 28.7 348 47-426 51-447 (451)
209 PRK06777 4-aminobutyrate amino 99.9 8.5E-19 1.8E-23 172.2 29.6 343 47-421 37-420 (421)
210 PRK00062 glutamate-1-semialdeh 99.9 3.8E-19 8.3E-24 175.2 26.7 339 47-423 47-425 (426)
211 TIGR00700 GABAtrnsam 4-aminobu 99.8 1.1E-18 2.5E-23 171.6 29.7 344 47-421 30-419 (420)
212 PLN02624 ornithine-delta-amino 99.8 2.1E-18 4.6E-23 171.5 31.3 335 47-422 72-444 (474)
213 PRK05937 8-amino-7-oxononanoat 99.8 1.4E-18 3E-23 168.6 28.8 326 50-424 4-352 (370)
214 PRK09028 cystathionine beta-ly 99.8 1.8E-18 3.9E-23 166.8 29.2 219 86-357 53-278 (394)
215 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1.8E-18 3.9E-23 167.9 28.9 189 71-301 15-205 (379)
216 COG0156 BioF 7-keto-8-aminopel 99.8 2.4E-18 5.1E-23 163.3 28.8 325 49-419 38-387 (388)
217 PRK05939 hypothetical protein; 99.8 3.5E-18 7.5E-23 166.0 30.7 155 93-284 45-206 (397)
218 PRK08064 cystathionine beta-ly 99.8 2.2E-18 4.7E-23 167.6 28.5 276 94-425 56-385 (390)
219 PRK08248 O-acetylhomoserine am 99.8 3E-18 6.4E-23 168.0 29.7 155 94-284 66-224 (431)
220 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.6E-18 3.5E-23 167.5 27.0 157 116-303 47-207 (376)
221 TIGR01885 Orn_aminotrans ornit 99.8 3.2E-18 6.9E-23 167.9 29.3 331 48-420 35-400 (401)
222 TIGR03235 DNA_S_dndA cysteine 99.8 5.1E-19 1.1E-23 170.8 21.8 255 94-396 44-321 (353)
223 PRK06702 O-acetylhomoserine am 99.8 2.3E-18 5.1E-23 167.4 26.1 217 94-357 63-311 (432)
224 PRK07671 cystathionine beta-ly 99.8 9.6E-18 2.1E-22 162.2 29.4 211 94-357 52-267 (377)
225 PLN02509 cystathionine beta-ly 99.8 7.9E-18 1.7E-22 165.2 29.0 222 85-357 124-350 (464)
226 PRK05968 hypothetical protein; 99.8 6.4E-18 1.4E-22 164.2 28.2 210 94-357 65-280 (389)
227 PRK04366 glycine dehydrogenase 99.8 3.7E-18 8E-23 170.3 26.7 332 54-425 72-451 (481)
228 PRK08360 4-aminobutyrate amino 99.8 8.8E-18 1.9E-22 165.5 28.1 346 47-424 38-428 (443)
229 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 8.4E-18 1.8E-22 165.0 27.6 157 92-284 57-217 (418)
230 PRK04612 argD acetylornithine 99.8 1E-17 2.2E-22 163.4 28.0 341 47-423 37-404 (408)
231 TIGR01329 cysta_beta_ly_E cyst 99.8 7.9E-18 1.7E-22 163.0 26.8 273 94-422 49-375 (378)
232 PRK05967 cystathionine beta-ly 99.8 1.5E-17 3.3E-22 160.1 28.1 193 122-357 84-281 (395)
233 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 7.9E-18 1.7E-22 163.4 26.1 157 116-303 47-206 (375)
234 TIGR01324 cysta_beta_ly_B cyst 99.8 5.6E-17 1.2E-21 156.5 30.1 218 86-357 42-267 (377)
235 PRK08117 4-aminobutyrate amino 99.8 1.9E-17 4.2E-22 163.6 27.5 344 47-423 40-430 (433)
236 PRK06176 cystathionine gamma-s 99.8 3.9E-17 8.4E-22 158.0 28.4 212 94-357 52-267 (380)
237 cd00615 Orn_deC_like Ornithine 99.8 1.4E-18 3E-23 163.0 17.4 172 88-283 55-231 (294)
238 PRK06084 O-acetylhomoserine am 99.8 5.1E-17 1.1E-21 159.1 29.0 155 94-284 60-218 (425)
239 PLN02651 cysteine desulfurase 99.8 1.1E-17 2.4E-22 162.1 23.1 257 94-396 45-322 (364)
240 TIGR03588 PseC UDP-4-keto-6-de 99.8 1.7E-16 3.6E-21 154.7 28.9 193 71-301 11-208 (380)
241 PF00266 Aminotran_5: Aminotra 99.8 9.4E-17 2E-21 156.1 27.0 275 94-412 45-371 (371)
242 PRK07495 4-aminobutyrate amino 99.8 1.1E-16 2.3E-21 157.2 27.1 344 47-424 37-423 (425)
243 TIGR03531 selenium_SpcS O-phos 99.8 1.2E-16 2.5E-21 155.3 26.6 209 122-357 128-345 (444)
244 PRK15407 lipopolysaccharide bi 99.8 3.8E-16 8.2E-21 153.6 28.8 200 55-290 28-237 (438)
245 TIGR02407 ectoine_ectB diamino 99.8 2.2E-16 4.8E-21 154.7 26.7 344 47-422 32-412 (412)
246 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.7E-16 3.6E-21 153.3 25.5 251 92-394 18-297 (352)
247 COG4992 ArgD Ornithine/acetylo 99.8 5.7E-16 1.2E-20 144.4 26.8 333 47-424 39-400 (404)
248 PRK09264 diaminobutyrate--2-ox 99.8 6.3E-16 1.4E-20 152.2 28.6 350 47-425 36-419 (425)
249 PRK05964 adenosylmethionine--8 99.8 6.9E-16 1.5E-20 152.1 28.9 344 47-423 39-423 (423)
250 KOG1368 Threonine aldolase [Am 99.8 1.9E-16 4.1E-21 139.3 21.9 324 51-420 22-366 (384)
251 PRK06058 4-aminobutyrate amino 99.8 8.6E-16 1.9E-20 151.9 28.8 344 47-422 53-442 (443)
252 PRK05994 O-acetylhomoserine am 99.7 2.2E-15 4.8E-20 148.0 29.6 155 94-284 65-223 (427)
253 PRK13034 serine hydroxymethylt 99.7 2.4E-15 5.1E-20 147.6 28.6 337 36-423 15-393 (416)
254 COG0399 WecE Predicted pyridox 99.7 2.3E-15 4.9E-20 141.9 27.1 302 73-422 18-373 (374)
255 TIGR01814 kynureninase kynuren 99.7 2.1E-15 4.5E-20 148.3 28.0 276 115-420 86-405 (406)
256 PRK13580 serine hydroxymethylt 99.7 4.4E-16 9.6E-21 151.4 21.8 326 50-423 49-446 (493)
257 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 3.3E-15 7.2E-20 143.5 27.1 212 95-357 58-275 (386)
258 TIGR02618 tyr_phenol_ly tyrosi 99.7 6.5E-15 1.4E-19 141.3 28.8 312 71-422 50-426 (450)
259 PRK07812 O-acetylhomoserine am 99.7 6.5E-15 1.4E-19 144.3 29.1 156 94-284 71-230 (436)
260 PRK08134 O-acetylhomoserine am 99.7 7.8E-15 1.7E-19 143.8 29.2 155 94-284 66-224 (433)
261 COG2008 GLY1 Threonine aldolas 99.7 7.1E-15 1.5E-19 134.4 25.6 312 67-420 10-341 (342)
262 PRK08114 cystathionine beta-ly 99.7 1.2E-14 2.5E-19 140.1 28.5 210 95-357 65-281 (395)
263 TIGR00709 dat 2,4-diaminobutyr 99.7 1.5E-14 3.2E-19 143.1 29.9 343 47-423 36-436 (442)
264 PRK08593 4-aminobutyrate amino 99.7 1.9E-14 4.2E-19 142.1 30.3 346 47-425 39-432 (445)
265 PRK03715 argD acetylornithine 99.7 2.1E-14 4.5E-19 139.9 29.3 337 48-422 34-393 (395)
266 PRK13237 tyrosine phenol-lyase 99.7 3.7E-14 8E-19 136.5 29.7 298 86-422 72-433 (460)
267 COG0626 MetC Cystathionine bet 99.7 1.8E-14 3.8E-19 136.7 26.8 274 94-422 65-394 (396)
268 COG0112 GlyA Glycine/serine hy 99.7 1.4E-14 3E-19 133.3 23.7 335 37-422 14-390 (413)
269 PLN02271 serine hydroxymethylt 99.7 2.6E-14 5.6E-19 139.7 26.4 329 50-421 148-539 (586)
270 PF04864 Alliinase_C: Allinase 99.7 2.6E-16 5.6E-21 142.5 11.7 284 94-419 45-362 (363)
271 PTZ00094 serine hydroxymethylt 99.7 1.6E-14 3.6E-19 143.4 24.7 288 97-422 85-408 (452)
272 PRK05613 O-acetylhomoserine am 99.7 9.9E-14 2.2E-18 136.0 29.2 155 94-283 71-229 (437)
273 cd01494 AAT_I Aspartate aminot 99.7 2.4E-15 5.3E-20 129.0 15.4 165 95-283 3-168 (170)
274 PF01041 DegT_DnrJ_EryC1: DegT 99.7 1E-14 2.2E-19 141.0 21.3 256 92-396 25-309 (363)
275 COG0001 HemL Glutamate-1-semia 99.7 5.8E-14 1.3E-18 132.4 25.1 342 47-424 50-430 (432)
276 PRK06434 cystathionine gamma-l 99.7 1.2E-13 2.7E-18 133.0 27.3 210 94-357 66-279 (384)
277 PLN02482 glutamate-1-semialdeh 99.6 1.5E-13 3.2E-18 136.1 28.2 340 47-422 96-473 (474)
278 PRK05769 4-aminobutyrate amino 99.6 1.5E-13 3.3E-18 135.6 28.3 343 47-422 51-439 (441)
279 PRK06541 hypothetical protein; 99.6 3.3E-13 7.1E-18 133.7 30.1 344 47-423 49-456 (460)
280 KOG1549 Cysteine desulfurase N 99.6 2.2E-14 4.8E-19 134.5 20.4 206 47-284 39-255 (428)
281 PRK02769 histidine decarboxyla 99.6 2.1E-13 4.6E-18 131.5 27.8 291 96-421 69-371 (380)
282 KOG1360 5-aminolevulinate synt 99.6 9.6E-14 2.1E-18 126.9 23.3 329 50-424 171-526 (570)
283 KOG2862 Alanine-glyoxylate ami 99.6 3.3E-13 7.3E-18 119.8 25.6 269 122-422 73-382 (385)
284 COG0160 GabT 4-aminobutyrate a 99.6 4E-13 8.7E-18 129.1 27.8 340 47-423 53-446 (447)
285 KOG1359 Glycine C-acetyltransf 99.6 3.1E-14 6.7E-19 125.2 18.2 325 48-423 65-413 (417)
286 KOG0053 Cystathionine beta-lya 99.6 4.1E-13 9E-18 125.8 26.8 194 122-356 97-294 (409)
287 cd00611 PSAT_like Phosphoserin 99.6 4.8E-14 1E-18 135.9 21.4 280 94-419 46-353 (355)
288 TIGR03372 putres_am_tran putre 99.6 3.2E-13 6.8E-18 132.7 27.2 341 47-420 72-442 (442)
289 PLN03226 serine hydroxymethylt 99.6 1.7E-13 3.7E-18 135.8 25.3 267 123-422 106-419 (475)
290 PRK11522 putrescine--2-oxoglut 99.6 3.8E-13 8.3E-18 133.0 27.6 344 48-424 80-453 (459)
291 PRK05355 3-phosphoserine/phosp 99.6 9.2E-14 2E-18 133.7 22.4 286 94-422 50-358 (360)
292 PRK12389 glutamate-1-semialdeh 99.6 1.9E-12 4.1E-17 127.7 30.4 337 47-422 50-427 (428)
293 TIGR01364 serC_1 phosphoserine 99.6 5.6E-13 1.2E-17 127.6 25.9 281 96-422 41-348 (349)
294 PRK06173 adenosylmethionine--8 99.6 1.9E-12 4.1E-17 127.2 30.0 343 47-424 41-427 (429)
295 PRK07986 adenosylmethionine--8 99.6 6.6E-13 1.4E-17 130.2 26.7 345 47-422 40-423 (428)
296 PRK06062 hypothetical protein; 99.6 1.7E-12 3.7E-17 128.5 29.2 344 47-424 50-447 (451)
297 PRK04311 selenocysteine syntha 99.6 1.9E-12 4.1E-17 127.4 28.8 339 50-421 79-463 (464)
298 PRK00615 glutamate-1-semialdeh 99.6 1.4E-12 3E-17 128.0 27.7 340 47-424 50-430 (433)
299 PF00464 SHMT: Serine hydroxym 99.6 5.9E-14 1.3E-18 133.7 17.2 299 50-394 20-359 (399)
300 PRK05639 4-aminobutyrate amino 99.6 2.4E-12 5.1E-17 127.4 29.3 343 47-424 50-445 (457)
301 PLN02760 4-aminobutyrate:pyruv 99.6 2.8E-12 6.1E-17 128.1 30.0 348 47-425 86-494 (504)
302 TIGR00508 bioA adenosylmethion 99.6 2.6E-12 5.6E-17 126.5 29.3 341 48-422 43-426 (427)
303 TIGR01788 Glu-decarb-GAD gluta 99.6 1.3E-12 2.9E-17 127.7 26.3 281 116-423 100-430 (431)
304 PRK06082 4-aminobutyrate amino 99.6 4E-12 8.7E-17 126.0 30.1 340 48-424 70-453 (459)
305 PRK05965 hypothetical protein; 99.6 5.1E-12 1.1E-16 125.3 30.8 345 47-425 43-450 (459)
306 PRK03080 phosphoserine aminotr 99.6 3.8E-13 8.2E-18 130.7 22.2 282 92-424 48-375 (378)
307 PRK06943 adenosylmethionine--8 99.6 5E-12 1.1E-16 125.1 29.5 343 47-423 51-447 (453)
308 PRK07030 adenosylmethionine--8 99.6 6.1E-12 1.3E-16 124.8 30.0 344 47-424 44-448 (466)
309 PRK06105 aminotransferase; Pro 99.6 5.5E-12 1.2E-16 125.2 29.5 348 47-425 45-452 (460)
310 PRK06916 adenosylmethionine--8 99.6 7.3E-12 1.6E-16 124.3 30.4 345 47-425 53-458 (460)
311 PRK09221 beta alanine--pyruvat 99.6 8.2E-12 1.8E-16 123.4 30.0 341 47-422 46-443 (445)
312 PRK07482 hypothetical protein; 99.6 7.5E-12 1.6E-16 124.3 29.5 346 47-423 47-455 (461)
313 PRK05630 adenosylmethionine--8 99.6 7.3E-12 1.6E-16 122.9 29.0 338 47-422 37-420 (422)
314 PLN02724 Molybdenum cofactor s 99.6 7.4E-13 1.6E-17 140.0 23.6 297 93-422 79-488 (805)
315 PRK13360 omega amino acid--pyr 99.5 1.2E-11 2.6E-16 122.1 29.5 281 116-423 107-441 (442)
316 PLN02414 glycine dehydrogenase 99.5 2.7E-12 5.9E-17 135.3 26.0 299 85-425 554-910 (993)
317 COG2873 MET17 O-acetylhomoseri 99.5 4E-12 8.7E-17 116.0 23.6 155 94-284 64-222 (426)
318 PRK06917 hypothetical protein; 99.5 1.4E-11 3.1E-16 121.8 29.8 349 47-426 28-441 (447)
319 TIGR01366 serC_3 phosphoserine 99.5 2.1E-12 4.5E-17 124.5 23.3 284 92-422 41-360 (361)
320 PRK04013 argD acetylornithine/ 99.5 1.8E-12 3.9E-17 124.3 22.6 322 47-422 21-360 (364)
321 PRK07678 aminotransferase; Val 99.5 1.2E-11 2.5E-16 122.6 28.7 339 47-423 44-450 (451)
322 PF01276 OKR_DC_1: Orn/Lys/Arg 99.5 1.8E-13 4E-18 130.9 15.1 236 91-355 64-316 (417)
323 PLN03032 serine decarboxylase; 99.5 5.3E-12 1.2E-16 120.9 25.2 287 95-418 69-372 (374)
324 PRK15029 arginine decarboxylas 99.5 2.2E-12 4.8E-17 132.4 23.8 176 91-283 203-397 (755)
325 PRK07481 hypothetical protein; 99.5 3.4E-11 7.3E-16 119.3 31.3 345 47-423 39-446 (449)
326 PF01212 Beta_elim_lyase: Beta 99.5 7.6E-14 1.7E-18 129.1 11.0 197 69-290 7-210 (290)
327 PRK08742 adenosylmethionine--8 99.5 3.2E-11 7E-16 119.7 29.5 279 116-423 130-468 (472)
328 PRK07046 aminotransferase; Val 99.5 3.9E-11 8.5E-16 118.7 30.0 332 47-423 72-451 (453)
329 TIGR00474 selA seryl-tRNA(sec) 99.5 1.2E-11 2.7E-16 121.4 26.0 176 94-301 124-310 (454)
330 PRK07480 putative aminotransfe 99.5 3.7E-11 8.1E-16 119.0 29.6 342 47-425 47-451 (456)
331 PRK06938 diaminobutyrate--2-ox 99.5 3.2E-11 6.9E-16 119.7 29.0 345 47-423 60-461 (464)
332 COG1103 Archaea-specific pyrid 99.5 8.5E-12 1.8E-16 108.8 21.6 288 94-422 63-380 (382)
333 PRK07036 hypothetical protein; 99.5 6.3E-11 1.4E-15 117.7 30.9 348 47-424 48-454 (466)
334 PRK13578 ornithine decarboxyla 99.5 1.1E-11 2.3E-16 126.1 24.1 174 89-282 170-365 (720)
335 PRK12403 putative aminotransfe 99.5 9.5E-11 2.1E-15 116.4 30.6 341 47-423 51-453 (460)
336 PRK06148 hypothetical protein; 99.5 2.9E-11 6.2E-16 130.5 28.7 342 47-423 621-1011(1013)
337 PRK06931 diaminobutyrate--2-ox 99.5 4.8E-11 1E-15 118.3 27.9 347 47-423 55-455 (459)
338 PRK15400 lysine decarboxylase 99.5 7.6E-12 1.6E-16 127.1 22.0 170 90-280 192-375 (714)
339 PRK06149 hypothetical protein; 99.5 3.7E-11 8E-16 129.5 28.5 340 48-422 583-970 (972)
340 PRK08297 L-lysine aminotransfe 99.5 6.5E-11 1.4E-15 117.0 27.7 280 116-423 111-442 (443)
341 PRK15399 lysine decarboxylase 99.5 4.7E-11 1E-15 121.4 26.3 174 90-283 192-378 (713)
342 PRK07483 hypothetical protein; 99.4 1.4E-10 3.1E-15 114.6 29.0 346 47-424 27-439 (443)
343 PLN02880 tyrosine decarboxylas 99.4 1.7E-10 3.7E-15 115.1 29.0 332 67-426 93-488 (490)
344 PRK06209 glutamate-1-semialdeh 99.4 1E-10 2.2E-15 115.5 26.6 328 47-423 45-406 (431)
345 PLN02263 serine decarboxylase 99.4 2.6E-10 5.6E-15 111.2 28.3 295 93-422 130-443 (470)
346 PLN02590 probable tyrosine dec 99.4 2.6E-10 5.6E-15 114.0 28.9 333 67-424 141-534 (539)
347 KOG1357 Serine palmitoyltransf 99.4 5.8E-12 1.3E-16 117.4 15.9 368 2-420 91-500 (519)
348 KOG1401 Acetylornithine aminot 99.4 2.5E-10 5.5E-15 105.6 26.3 345 47-423 53-431 (433)
349 COG1982 LdcC Arginine/lysine/o 99.4 1.7E-10 3.6E-15 112.9 23.5 170 91-283 68-243 (557)
350 TIGR03251 LAT_fam L-lysine 6-t 99.4 5.5E-10 1.2E-14 110.3 27.0 276 116-418 104-430 (431)
351 TIGR01365 serC_2 phosphoserine 99.4 2.3E-10 5E-15 109.8 23.3 258 122-419 63-370 (374)
352 TIGR00699 GABAtrns_euk 4-amino 99.4 5.1E-10 1.1E-14 110.4 25.8 277 116-420 123-464 (464)
353 COG0161 BioA Adenosylmethionin 99.3 4.4E-10 9.5E-15 107.7 24.0 345 48-424 42-445 (449)
354 PLN02452 phosphoserine transam 99.3 4.2E-10 9E-15 107.9 22.5 261 122-421 76-362 (365)
355 TIGR00461 gcvP glycine dehydro 99.3 5.1E-10 1.1E-14 116.9 23.5 300 85-425 516-870 (939)
356 PRK12566 glycine dehydrogenase 99.3 6.7E-10 1.5E-14 115.4 23.9 299 86-424 530-878 (954)
357 PRK05367 glycine dehydrogenase 99.3 1.3E-09 2.8E-14 115.7 26.3 303 86-425 529-878 (954)
358 TIGR02617 tnaA_trp_ase tryptop 99.3 3.8E-09 8.3E-14 101.0 26.7 330 50-422 41-441 (467)
359 COG0076 GadB Glutamate decarbo 99.3 7.4E-10 1.6E-14 108.8 21.7 241 93-357 98-362 (460)
360 PF06838 Met_gamma_lyase: Meth 99.2 3.5E-09 7.7E-14 97.3 22.4 180 92-299 54-249 (403)
361 PRK12462 phosphoserine aminotr 99.2 4.8E-09 1E-13 99.7 22.4 260 122-420 73-360 (364)
362 PLN02974 adenosylmethionine-8- 99.2 4.3E-08 9.4E-13 102.6 29.5 215 183-420 567-816 (817)
363 TIGR03799 NOD_PanD_pyr putativ 99.1 4.8E-08 1.1E-12 97.9 27.4 247 86-357 119-420 (522)
364 KOG1404 Alanine-glyoxylate ami 99.1 2.3E-08 5E-13 92.2 21.5 334 48-416 48-432 (442)
365 PF00202 Aminotran_3: Aminotra 99.0 5E-09 1.1E-13 100.1 14.9 254 48-323 14-291 (339)
366 KOG1358 Serine palmitoyltransf 99.0 1.2E-08 2.7E-13 93.8 14.7 328 47-421 91-464 (467)
367 PLN02414 glycine dehydrogenase 99.0 1.5E-07 3.4E-12 99.9 24.5 275 94-418 150-465 (993)
368 PRK05367 glycine dehydrogenase 99.0 2.3E-07 5E-12 98.9 25.0 270 95-417 124-437 (954)
369 COG3844 Kynureninase [Amino ac 98.9 8.5E-07 1.8E-11 80.2 23.9 342 34-424 16-404 (407)
370 PLN02994 1-aminocyclopropane-1 98.9 2.6E-09 5.6E-14 88.9 7.1 65 87-155 87-153 (153)
371 PF00282 Pyridoxal_deC: Pyrido 98.9 3E-07 6.6E-12 88.8 21.9 269 67-358 50-356 (373)
372 COG3033 TnaA Tryptophanase [Am 98.8 3E-06 6.4E-11 77.7 23.9 316 79-422 67-444 (471)
373 KOG1403 Predicted alanine-glyo 98.8 2.7E-07 5.8E-12 82.2 16.8 285 122-434 107-448 (452)
374 KOG1383 Glutamate decarboxylas 98.8 3.4E-06 7.3E-11 80.0 23.2 358 32-428 61-452 (491)
375 KOG2467 Glycine/serine hydroxy 98.8 2.4E-07 5.3E-12 84.7 14.8 270 122-421 111-425 (477)
376 KOG1402 Ornithine aminotransfe 98.8 1.6E-06 3.4E-11 78.5 19.5 214 181-421 195-426 (427)
377 COG1003 GcvP Glycine cleavage 98.7 5.9E-06 1.3E-10 77.7 22.0 302 85-425 95-450 (496)
378 COG1921 SelA Selenocysteine sy 98.7 7.9E-06 1.7E-10 77.1 21.6 190 100-323 72-267 (395)
379 COG4100 Cystathionine beta-lya 98.7 3.5E-06 7.6E-11 75.3 18.0 168 92-290 65-251 (416)
380 TIGR03811 tyr_de_CO2_Ent tyros 98.6 6.1E-05 1.3E-09 76.7 29.1 169 67-241 94-326 (608)
381 PF05889 SLA_LP_auto_ag: Solub 98.5 9.7E-06 2.1E-10 76.4 17.6 280 122-421 79-389 (389)
382 PF03841 SelA: L-seryl-tRNA se 98.3 7.5E-07 1.6E-11 83.2 5.9 213 122-356 67-296 (367)
383 COG1932 SerC Phosphoserine ami 98.2 0.00022 4.8E-09 66.2 19.3 262 116-421 67-362 (365)
384 TIGR00461 gcvP glycine dehydro 98.2 0.00054 1.2E-08 72.7 23.9 245 122-417 131-426 (939)
385 PF02347 GDC-P: Glycine cleava 98.1 0.00057 1.2E-08 66.2 19.7 195 122-356 132-364 (429)
386 COG0403 GcvP Glycine cleavage 98.0 0.011 2.4E-07 56.2 25.5 260 122-418 142-446 (450)
387 KOG0629 Glutamate decarboxylas 98.0 0.0012 2.6E-08 62.3 19.0 151 122-282 164-332 (510)
388 KOG1405 4-aminobutyrate aminot 97.7 0.0017 3.6E-08 59.9 14.0 215 181-422 254-483 (484)
389 KOG0628 Aromatic-L-amino-acid/ 97.5 0.0094 2E-07 57.1 17.2 93 146-243 185-280 (511)
390 PRK12566 glycine dehydrogenase 97.2 0.15 3.2E-06 54.5 24.3 251 122-417 146-439 (954)
391 KOG3843 Predicted serine hydro 97.2 0.028 6E-07 50.0 15.3 177 161-356 121-300 (432)
392 PLN02672 methionine S-methyltr 96.6 0.084 1.8E-06 57.5 16.5 240 50-317 387-641 (1082)
393 KOG2040 Glycine dehydrogenase 96.4 0.053 1.1E-06 54.3 12.1 143 85-237 568-719 (1001)
394 KOG2790 Phosphoserine aminotra 94.5 1.5 3.3E-05 39.8 13.4 311 49-421 5-367 (370)
395 KOG3846 L-kynurenine hydrolase 92.8 7.9 0.00017 35.7 20.9 297 95-424 114-463 (465)
396 cd06568 GH20_SpHex_like A subg 75.5 6.2 0.00014 37.6 5.7 71 156-233 23-93 (329)
397 cd02742 GH20_hexosaminidase Be 73.3 7.9 0.00017 36.4 5.8 69 157-233 22-90 (303)
398 cd06562 GH20_HexA_HexB-like Be 70.9 7.3 0.00016 37.4 5.0 66 156-233 23-88 (348)
399 COG0296 GlgB 1,4-alpha-glucan 70.5 6.4 0.00014 40.6 4.6 38 206-243 205-242 (628)
400 PF10087 DUF2325: Uncharacteri 70.3 35 0.00077 25.7 7.8 71 152-234 11-81 (97)
401 PF02662 FlpD: Methyl-viologen 69.8 15 0.00033 29.3 5.9 56 166-228 30-90 (124)
402 cd06570 GH20_chitobiase-like_1 68.6 9.1 0.0002 36.1 5.0 63 157-233 24-86 (311)
403 COG2102 Predicted ATPases of P 65.6 93 0.002 27.6 10.1 97 122-232 6-116 (223)
404 cd06569 GH20_Sm-chitobiase-lik 62.5 18 0.00039 36.1 6.0 78 156-233 27-115 (445)
405 cd06563 GH20_chitobiase-like T 60.7 19 0.00042 34.7 5.8 77 157-233 24-104 (357)
406 COG1105 FruK Fructose-1-phosph 59.1 1E+02 0.0022 29.0 9.8 37 197-236 131-167 (310)
407 TIGR01470 cysG_Nterm siroheme 56.7 1.4E+02 0.003 26.2 12.1 92 117-236 11-103 (205)
408 KOG1251 Serine racemase [Signa 56.4 1.2E+02 0.0027 27.4 9.2 80 117-208 75-155 (323)
409 PF14258 DUF4350: Domain of un 54.2 49 0.0011 23.0 5.6 21 214-234 50-70 (70)
410 PF00728 Glyco_hydro_20: Glyco 52.3 12 0.00025 36.0 2.8 66 157-233 24-91 (351)
411 COG2515 Acd 1-aminocyclopropan 51.4 1.5E+02 0.0032 27.8 9.3 105 120-227 66-178 (323)
412 KOG2741 Dimeric dihydrodiol de 49.9 67 0.0015 30.5 7.1 77 151-241 59-135 (351)
413 TIGR03815 CpaE_hom_Actino heli 49.7 2.3E+02 0.005 26.7 11.8 132 93-236 74-213 (322)
414 PF05368 NmrA: NmrA-like famil 45.8 2.1E+02 0.0046 25.2 10.3 79 141-233 20-99 (233)
415 COG0505 CarA Carbamoylphosphat 45.7 40 0.00086 32.1 4.9 56 142-208 178-234 (368)
416 PLN03244 alpha-amylase; Provis 45.6 36 0.00078 36.2 5.0 41 203-243 429-469 (872)
417 PF01408 GFO_IDH_MocA: Oxidore 45.4 80 0.0017 24.4 6.2 21 213-233 98-118 (120)
418 PF09885 DUF2112: Uncharacteri 45.2 31 0.00068 27.6 3.5 49 371-423 93-143 (143)
419 COG0036 Rpe Pentose-5-phosphat 44.0 2.3E+02 0.005 25.1 11.8 105 145-267 67-198 (220)
420 TIGR03271 methan_mark_5 putati 43.4 40 0.00086 26.9 3.8 49 371-423 92-142 (142)
421 smart00642 Aamy Alpha-amylase 43.4 32 0.0007 29.0 3.8 27 213-239 68-94 (166)
422 PRK07476 eutB threonine dehydr 43.2 2.4E+02 0.0051 26.7 10.0 51 118-171 70-120 (322)
423 KOG2040 Glycine dehydrogenase 42.7 4.2E+02 0.0092 27.8 21.7 97 122-233 185-281 (1001)
424 TIGR00289 conserved hypothetic 42.3 2.5E+02 0.0054 25.0 9.3 98 121-232 5-115 (222)
425 PRK08638 threonine dehydratase 41.7 1.2E+02 0.0027 28.8 7.9 49 122-171 80-128 (333)
426 PRK05678 succinyl-CoA syntheta 41.4 69 0.0015 29.9 5.9 47 181-236 78-124 (291)
427 COG0031 CysK Cysteine synthase 40.7 1.7E+02 0.0036 27.4 8.2 56 113-172 59-116 (300)
428 PLN02970 serine racemase 40.6 1.5E+02 0.0033 28.1 8.3 52 117-171 77-128 (328)
429 CHL00200 trpA tryptophan synth 40.5 2.9E+02 0.0064 25.3 9.9 86 141-234 117-208 (263)
430 COG2984 ABC-type uncharacteriz 40.4 3.2E+02 0.007 25.8 10.7 147 67-236 42-196 (322)
431 COG4050 Uncharacterized protei 40.2 47 0.001 25.9 3.7 50 372-425 98-149 (152)
432 TIGR01275 ACC_deam_rel pyridox 39.7 1.3E+02 0.0029 28.1 7.8 28 144-171 84-112 (311)
433 PF14097 SpoVAE: Stage V sporu 39.0 1.3E+02 0.0028 25.4 6.3 77 201-283 29-107 (180)
434 PRK05638 threonine synthase; V 38.8 2.5E+02 0.0054 28.0 9.8 52 117-171 114-165 (442)
435 COG1648 CysG Siroheme synthase 38.3 2.8E+02 0.0061 24.4 15.8 91 117-236 14-106 (210)
436 cd01562 Thr-dehyd Threonine de 38.3 1.9E+02 0.0042 26.8 8.6 53 117-172 67-119 (304)
437 cd06448 L-Ser-dehyd Serine deh 37.9 2.6E+02 0.0057 26.4 9.4 94 122-222 56-149 (316)
438 PLN02955 8-amino-7-oxononanoat 37.9 4.4E+02 0.0096 26.6 14.5 153 86-265 110-284 (476)
439 TIGR02402 trehalose_TreZ malto 37.5 56 0.0012 33.6 5.1 35 208-242 153-187 (542)
440 TIGR00290 MJ0570_dom MJ0570-re 36.7 3.1E+02 0.0067 24.5 9.7 97 122-232 6-115 (223)
441 PRK08329 threonine synthase; V 36.6 2.4E+02 0.0051 27.1 9.0 52 117-171 106-157 (347)
442 PRK06815 hypothetical protein; 36.5 1.9E+02 0.0042 27.2 8.3 50 122-172 73-122 (317)
443 cd01563 Thr-synth_1 Threonine 35.6 2.4E+02 0.0053 26.5 8.9 52 117-171 72-123 (324)
444 PRK08246 threonine dehydratase 35.4 3.8E+02 0.0083 25.1 10.3 73 92-171 49-121 (310)
445 PLN02591 tryptophan synthase 34.8 3.5E+02 0.0077 24.6 9.9 85 141-233 104-194 (250)
446 PRK08883 ribulose-phosphate 3- 34.8 3.3E+02 0.0071 24.2 10.0 28 158-190 100-127 (220)
447 PF12427 DUF3665: Branched-cha 34.7 59 0.0013 17.0 2.4 17 201-221 6-22 (23)
448 COG1204 Superfamily II helicas 33.4 2.7E+02 0.0058 30.1 9.4 70 95-170 34-109 (766)
449 COG0065 LeuC 3-isopropylmalate 33.4 77 0.0017 30.6 4.8 41 196-236 57-97 (423)
450 PRK05234 mgsA methylglyoxal sy 33.1 2.3E+02 0.0049 23.2 7.0 73 155-235 40-113 (142)
451 PLN02960 alpha-amylase 32.8 68 0.0015 34.7 4.8 37 207-243 458-494 (897)
452 PRK07048 serine/threonine dehy 32.8 2.1E+02 0.0045 27.0 7.9 49 122-171 77-125 (321)
453 COG0816 Predicted endonuclease 32.8 1.5E+02 0.0032 24.3 5.8 55 180-236 40-97 (141)
454 PF00834 Ribul_P_3_epim: Ribul 32.8 2E+02 0.0044 25.1 7.1 107 144-268 82-196 (201)
455 PRK00278 trpC indole-3-glycero 32.7 1.3E+02 0.0029 27.5 6.3 52 176-236 117-168 (260)
456 TIGR00623 sula cell division i 32.4 3.1E+02 0.0067 23.2 10.2 86 137-230 54-140 (168)
457 PRK09354 recA recombinase A; P 31.9 3.9E+02 0.0084 25.7 9.4 29 141-169 86-114 (349)
458 TIGR02012 tigrfam_recA protein 31.9 3.4E+02 0.0074 25.7 8.9 44 376-422 263-307 (321)
459 cd06449 ACCD Aminocyclopropane 31.3 2.8E+02 0.006 26.0 8.4 17 156-172 100-116 (307)
460 COG1058 CinA Predicted nucleot 30.9 1.2E+02 0.0025 27.7 5.4 84 142-236 9-95 (255)
461 PLN02447 1,4-alpha-glucan-bran 30.8 72 0.0016 34.0 4.6 35 208-242 293-327 (758)
462 COG0157 NadC Nicotinate-nucleo 30.7 4.4E+02 0.0095 24.4 9.9 72 181-272 197-268 (280)
463 cd00758 MoCF_BD MoCF_BD: molyb 30.4 1.3E+02 0.0028 24.1 5.3 56 155-215 23-78 (133)
464 TIGR02026 BchE magnesium-proto 30.4 2.6E+02 0.0057 28.3 8.6 68 159-237 31-101 (497)
465 PF00128 Alpha-amylase: Alpha 30.2 40 0.00087 31.2 2.5 32 212-243 49-80 (316)
466 PLN02460 indole-3-glycerol-pho 30.2 69 0.0015 30.5 4.0 79 145-233 157-235 (338)
467 TIGR01019 sucCoAalpha succinyl 30.1 1.3E+02 0.0029 27.9 5.8 47 181-236 76-122 (286)
468 PRK12313 glycogen branching en 30.0 87 0.0019 32.9 5.2 34 209-242 214-247 (633)
469 COG1023 Gnd Predicted 6-phosph 30.0 2.8E+02 0.0062 25.1 7.4 136 137-303 17-153 (300)
470 TIGR01515 branching_enzym alph 29.9 83 0.0018 32.9 5.0 35 208-242 199-233 (613)
471 PF00218 IGPS: Indole-3-glycer 29.9 69 0.0015 29.2 3.8 79 145-234 86-164 (254)
472 PF11629 Mst1_SARAH: C termina 29.8 1.5E+02 0.0033 19.2 4.2 25 330-354 23-47 (49)
473 PRK04302 triosephosphate isome 29.6 4E+02 0.0086 23.6 10.0 36 195-234 85-120 (223)
474 COG0616 SppA Periplasmic serin 29.6 2.5E+02 0.0055 26.5 7.7 56 181-237 81-139 (317)
475 PRK08176 pdxK pyridoxal-pyrido 29.5 2.7E+02 0.0059 25.7 7.9 36 195-237 88-128 (281)
476 cd01561 CBS_like CBS_like: Thi 29.1 2.3E+02 0.005 26.2 7.4 50 122-172 58-107 (291)
477 PF04016 DUF364: Domain of unk 29.0 70 0.0015 26.4 3.5 82 140-233 8-94 (147)
478 PRK06463 fabG 3-ketoacyl-(acyl 29.0 4E+02 0.0086 23.7 8.9 27 122-149 11-37 (255)
479 KOG1201 Hydroxysteroid 17-beta 28.7 4.9E+02 0.011 24.3 10.0 96 122-223 43-144 (300)
480 PLN02556 cysteine synthase/L-3 28.6 1.7E+02 0.0038 28.3 6.6 82 122-209 116-197 (368)
481 PRK14706 glycogen branching en 28.6 77 0.0017 33.3 4.4 36 207-242 209-244 (639)
482 KOG1465 Translation initiation 28.3 5E+02 0.011 24.3 10.3 106 115-237 162-273 (353)
483 TIGR02104 pulA_typeI pullulana 28.1 65 0.0014 33.6 3.8 29 213-241 227-255 (605)
484 PLN02565 cysteine synthase 28.0 3.8E+02 0.0083 25.3 8.7 49 122-171 72-120 (322)
485 TIGR01761 thiaz-red thiazoliny 27.8 2.5E+02 0.0054 27.0 7.4 70 151-233 51-120 (343)
486 PRK05402 glycogen branching en 27.7 84 0.0018 33.7 4.6 35 207-241 307-341 (726)
487 KOG4589 Cell division protein 27.6 4E+02 0.0087 23.2 7.6 44 181-226 121-165 (232)
488 PF04002 RadC: RadC-like JAB d 27.5 88 0.0019 24.8 3.7 59 179-241 50-118 (123)
489 TIGR00196 yjeF_cterm yjeF C-te 27.3 3.3E+02 0.0071 24.9 8.0 74 144-235 53-126 (272)
490 COG1377 FlhB Flagellar biosynt 27.3 75 0.0016 30.5 3.7 20 217-236 298-317 (363)
491 cd06564 GH20_DspB_LnbB-like Gl 27.2 65 0.0014 30.6 3.4 75 157-233 23-100 (326)
492 PF08672 APC2: Anaphase promot 27.2 55 0.0012 22.3 2.1 33 205-237 26-58 (60)
493 PLN03013 cysteine synthase 27.2 4.1E+02 0.0089 26.4 8.9 49 122-171 180-228 (429)
494 cd00886 MogA_MoaB MogA_MoaB fa 27.1 1.9E+02 0.0041 23.8 5.8 60 156-220 25-86 (152)
495 TIGR00789 flhB_rel flhB C-term 27.0 53 0.0011 24.1 2.1 21 216-236 28-48 (82)
496 PRK06483 dihydromonapterin red 26.8 4.3E+02 0.0094 23.1 9.8 46 122-168 6-51 (236)
497 COG0352 ThiE Thiamine monophos 26.6 1.2E+02 0.0026 26.8 4.7 50 182-236 24-73 (211)
498 PF02571 CbiJ: Precorrin-6x re 26.6 1.9E+02 0.0041 26.3 6.1 92 122-232 5-97 (249)
499 PRK14723 flhF flagellar biosyn 26.5 5.7E+02 0.012 27.6 10.2 130 94-237 161-305 (767)
500 COG2257 Uncharacterized homolo 26.4 44 0.00094 24.8 1.5 20 217-236 34-53 (92)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-59 Score=425.68 Aligned_cols=394 Identities=44% Similarity=0.808 Sum_probs=374.4
Q ss_pred cccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhc-CCCCCCCCCCcccHHHHHHHHH
Q 013839 25 WWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA-GSEFLESISASVSTKMVEESVK 103 (435)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~ 103 (435)
+|++++..++++++.+.+.+++++.+++|||++|.|.|+.|..++.+.|+++.+.+. ......|.|..|.+++++++++
T Consensus 1 ~F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ 80 (396)
T COG1448 1 MFEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQK 80 (396)
T ss_pred CccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999999999999987 3457789999999999999999
Q ss_pred hHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChH
Q 013839 104 LVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFA 183 (435)
Q Consensus 104 ~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e 183 (435)
.+++.++..++++++..+.|.|||+|+.+.+.|+..+.|..+|++++|+|++|..+++..|.++..||.+|.++.++|++
T Consensus 81 llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~ 160 (396)
T COG1448 81 LLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFD 160 (396)
T ss_pred HhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHH
Confidence 99999888888999999999999999999999999988989999999999999999999999999999998888899999
Q ss_pred hHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 184 ALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 184 ~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
.+.+.+.+.+.+..+++-.+||||||..++.++|++|+++.++.+++.+.|-+|++|..+ ++.|...++.+......++
T Consensus 161 ~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~l 239 (396)
T COG1448 161 GMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELL 239 (396)
T ss_pred HHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEE
Confidence 999999988777778888899999999999999999999999999999999999999988 8889999999988877899
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
++.||||.||+.|.|+|.+++++.+.+...++.+++....+..+++||..+...++..|++++|+..|++++..+++|+.
T Consensus 240 va~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~ 319 (396)
T COG1448 240 VASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRIL 319 (396)
T ss_pred EEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999889889889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHHHH
Q 013839 344 RKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 344 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~~~ 419 (435)
+.|..|.+.|+..+.+..|+++..|.|||.+.|++.+++.+|.+++||+++.+||||++++++.+++++.++|.++
T Consensus 320 ~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 320 EMRQALVDALKALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHHHHHHHHHHhhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCCeeeeccCChhhHHHHHHHHHhh
Confidence 9999999999998887889999999999999999999999999999999999999999999999999999999875
No 2
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.3e-57 Score=443.82 Aligned_cols=400 Identities=59% Similarity=0.968 Sum_probs=328.4
Q ss_pred ccccccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHh-cCCCCCCCCCCcccHHHHHH
Q 013839 22 TVGWWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKI-AGSEFLESISASVSTKMVEE 100 (435)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~g~~~lr~~ 100 (435)
..++|+++...+.+.+....+.++.+..+..++|+.|.++++++++...+.++++...+ ..+...+|+++.|.++||++
T Consensus 20 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~a 99 (423)
T PLN02397 20 ASSRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKL 99 (423)
T ss_pred hhhHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHH
Confidence 45679999999999998888888777778899999997547666566667777776665 34445579999999999999
Q ss_pred HHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCc
Q 013839 101 SVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSL 180 (435)
Q Consensus 101 ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 180 (435)
+++++.+.+.....+++|....+.+|+++..++..++.++.|||+|++++|+|+.|...++..|++++.+++.+++++++
T Consensus 100 ia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~ 179 (423)
T PLN02397 100 SAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGL 179 (423)
T ss_pred HHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCcc
Confidence 99999766544344455643457788888766655777778999999999999999999999999999999844456899
Q ss_pred ChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCC
Q 013839 181 DFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEH 260 (435)
Q Consensus 181 d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 260 (435)
|++.+++.+.+..++++++++++||||||.+++.+++++|+++|++|+++||+||+|.+|.+++...+..++..+....+
T Consensus 180 d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 259 (423)
T PLN02397 180 DFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGH 259 (423)
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCC
Confidence 99999988865435689999999999999999999999999999999999999999999998532112344444544456
Q ss_pred eEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 013839 261 LIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMAD 340 (435)
Q Consensus 261 ~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~ 340 (435)
++|+++||||+|+++|||+||+++++++++....+.+.+.+..+..+.+++.+.|.+++.+|.++.+.+.|.++++++++
T Consensus 260 ~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~ 339 (423)
T PLN02397 260 EILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMAD 339 (423)
T ss_pred cEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 79999999999999999999996334466644556666666666666778899999999999987766677777899999
Q ss_pred HHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHHHHH
Q 013839 341 RIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 341 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~~~l 420 (435)
+++++++.+.+.|++++.+..|.+..|+||||+|++++.+++.+|++++||.+.++|||++++.+.+++++++++|++++
T Consensus 340 ~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~~~~~~~Ll~~~~V~v~~~~Ri~~~~~~~~~i~~~~~~i~~~~ 419 (423)
T PLN02397 340 RIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLADAIHAVV 419 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEeeCCHHHHHHHHHHHHHHH
Confidence 99999999999999987544567788999999999999889999999999999999999998679999999999999997
Q ss_pred H
Q 013839 421 R 421 (435)
Q Consensus 421 ~ 421 (435)
+
T Consensus 420 ~ 420 (423)
T PLN02397 420 T 420 (423)
T ss_pred h
Confidence 5
No 3
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-57 Score=442.51 Aligned_cols=398 Identities=51% Similarity=0.865 Sum_probs=324.7
Q ss_pred ccccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhc-CCCCCCCCCCcccHHHHHHHH
Q 013839 24 GWWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA-GSEFLESISASVSTKMVEESV 102 (435)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia 102 (435)
++++++...+++.++...+..+++.++++|||+.|.|.+++++..+.+.++++...+. .+...+|+++.|.++||++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia 82 (404)
T PTZ00376 3 SLFSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQ 82 (404)
T ss_pred hhhhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Confidence 3477777777777777777776555678999999997556555566667777665554 243578999999999999999
Q ss_pred HhHcCCCCccccCCCeeeEecCCchhHHHHHHHH-HHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcC
Q 013839 103 KLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEF-QRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLD 181 (435)
Q Consensus 103 ~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~-~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 181 (435)
+++.+.+...+++++|....|.|+++|+.++..+ .++++|||+|++++|+|+.|...++..|++++.+++.+++++++|
T Consensus 83 ~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d 162 (404)
T PTZ00376 83 KLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLD 162 (404)
T ss_pred HHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcC
Confidence 9997665444568888754599999999888533 356789999999999999999999999999999998544568999
Q ss_pred hHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCe
Q 013839 182 FAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHL 261 (435)
Q Consensus 182 ~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 261 (435)
++.+++.+.+..++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++...+..++..+.+..++
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 242 (404)
T PTZ00376 163 FDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE 242 (404)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCc
Confidence 99999998654345788999999999999999999999999999999999999999999986321123344444444568
Q ss_pred EEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 013839 262 IGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADR 341 (435)
Q Consensus 262 ~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~ 341 (435)
+|+++||||.|+++|+|+||++++..+++..+.+++.+.+..+..+.+++.++|.++..+|.++.+.+.|.+++++.+++
T Consensus 243 vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 322 (404)
T PTZ00376 243 FLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGR 322 (404)
T ss_pred EEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999953234777555566666665555666778899999999999876666666778888999
Q ss_pred HHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHHHHHH
Q 013839 342 IQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 342 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~~~l~ 421 (435)
++++++.+.+.|++++.+..+.+..+++|||+|+.++.++++.|++++||.+.||||++++..+.++++.++++|++++.
T Consensus 323 ~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~L~~~~~v~v~p~~Ris~~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 323 IQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred HHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCCHHHHHHHHHhCCEeecCCCeEEEeccCHHhHHHHHHHHHHHHh
Confidence 99999999999998865434667788999999999999999999988899999999999986689999999999999875
No 4
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=8.5e-56 Score=432.97 Aligned_cols=394 Identities=42% Similarity=0.745 Sum_probs=318.9
Q ss_pred ccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhc-CCCCCCCCCCcccHHHHHHHHHh
Q 013839 26 WDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA-GSEFLESISASVSTKMVEESVKL 104 (435)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~ 104 (435)
|+++...+++.+......++.+..+++|+|+.|.|++++..+++.+.+.++..++. .+...+|++..|.++||++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 81 (396)
T PRK09257 2 FEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL 81 (396)
T ss_pred cccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence 56777777777777767666545578999999987443322322456666666654 33455799999999999999999
Q ss_pred HcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHh
Q 013839 105 VYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAA 184 (435)
Q Consensus 105 l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~ 184 (435)
+.+.+...+.++++..++|+|+++|+.++..++..++|||+|++++|+|+.|..+++..|++++.+|+.+++++++|++.
T Consensus 82 ~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~ 161 (396)
T PRK09257 82 LFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDA 161 (396)
T ss_pred hcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHH
Confidence 97665544567887223899999999998544555689999999999999999999999999999997445568999999
Q ss_pred HHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEE
Q 013839 185 LMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGC 264 (435)
Q Consensus 185 l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 264 (435)
+++.+.+.+++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.++. +.+..++..+.+..+++|+
T Consensus 162 l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~vi~ 240 (396)
T PRK09257 162 MLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGL-EEDAYGLRAFAAAGLELLV 240 (396)
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccch-HHHHHHHHHHHhcCCcEEE
Confidence 999887544456888889999999999999999999999999999999999999998641 1234455555555578999
Q ss_pred EecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 013839 265 AQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQR 344 (435)
Q Consensus 265 ~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~ 344 (435)
++||||.|+++|+|+||+++++++++...+++..+....+..+.+++.+.|.+++.++.++.+.+.|.+++++.++++++
T Consensus 241 i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~ 320 (396)
T PRK09257 241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKA 320 (396)
T ss_pred EEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999974343555444566666666566677789999999999999887666678899999999999
Q ss_pred HHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHHHHH
Q 013839 345 KRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 345 ~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~~~l 420 (435)
+++.+.+.|++++.+..+.+..+++|+|+|+.++.+++.++++++||.+.|.|||+|++.+++++++++++|++++
T Consensus 321 rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 321 MRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred HHHHHHHHHHhcCCCCCcccccccceEEEecCCCHHHHHHHHHcCCEEEcCCCeEEEeeCCHHHHHHHHHHHHhhC
Confidence 9999999999886432467778999999999999888888889999999999999998779999999999998753
No 5
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.2e-57 Score=433.85 Aligned_cols=345 Identities=15% Similarity=0.183 Sum_probs=298.0
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCC-eeeEecCCchh
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGR-SAGVQALSGTG 128 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-v~~~~t~gg~~ 128 (435)
.++|+|++|+| ++ +.|.+..+.+..++..+.. .|.+..|.++||++|++++...++..+.+++ |. +|+|+++
T Consensus 28 ~~vi~l~iG~P-d~---~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eii--vt~Ga~~ 100 (393)
T COG0436 28 EDVIDLSIGEP-DF---PTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEII--VTAGAKE 100 (393)
T ss_pred CCEEEeCCCCC-CC---CCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEE--EeCCHHH
Confidence 58999999997 55 6777777777777765533 6889999999999999999655544444555 88 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCC-CCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDP-DSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
|+.++ ++++++|||+|++++|.|+.|...+..+|++++.+++..+ ++|.+|+++|+++++ ++++++++++||||
T Consensus 101 al~~~--~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~---~ktk~i~ln~P~NP 175 (393)
T COG0436 101 ALFLA--FLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT---PKTKAIILNSPNNP 175 (393)
T ss_pred HHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC---ccceEEEEeCCCCC
Confidence 99998 8889999999999999999999999999999999997433 489999999999998 68999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++++++++|+++|++|+++||.||+|.++.|++. .+.++..+.+..+++|.+.||||.++++|||+||+++ +
T Consensus 176 TGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~--~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~--~ 251 (393)
T COG0436 176 TGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA--EHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVG--P 251 (393)
T ss_pred cCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC--CcCCHhhcCCCcceEEEEecccccccccccceeEeec--C
Confidence 99999999999999999999999999999999999862 3455655555568999999999999999999999974 2
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc-
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT- 366 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~- 366 (435)
+++ +++.+.+++.....+++.+.|.++..+|..++. ....+..++.|+++|+.+.+.|.+++. +.+..
T Consensus 252 ~~~----l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~----~~~~~~~~~~~~~rrd~l~~~l~~~~g---~~~~~~ 320 (393)
T COG0436 252 PEE----LIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS----DEVVEEMREEYRERRDLLVEALNEIGG---LSVVKP 320 (393)
T ss_pred hHH----HHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc----hHHHHHHHHHHHHHHHHHHHHHHhcCC---eeeccC
Confidence 377 888888888888999999999999999997631 146677779999999999999998863 67777
Q ss_pred cCcceeEecCCC-----HHHHHHHhhhccEEEeCC-------C----cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 367 NQLGMFCFSGLT-----PYQVDRLAKEFHIYMTQD-------G----RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 367 ~~~g~~~~~~~~-----~~~~~~ll~~~gI~i~pg-------g----Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
|+|+||+|++++ .+++.+||+++||.+.|| | |+|++. +.+++++++++|.++++.
T Consensus 321 p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 321 PEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLAE 391 (393)
T ss_pred CCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHHh
Confidence 889999999662 568899999999999997 2 999987 669999999999998865
No 6
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-53 Score=376.21 Aligned_cols=401 Identities=58% Similarity=0.967 Sum_probs=380.1
Q ss_pred cccccccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcC-CCCCCCCCCcccHHHHH
Q 013839 21 RTVGWWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-SEFLESISASVSTKMVE 99 (435)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~lr~ 99 (435)
+..|||++|+..|+|+++.+.++++.++++.+|||++|.|.|+++.|.+.+.++++..++.. ....+|.|..|++++.+
T Consensus 23 ~~~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k 102 (427)
T KOG1411|consen 23 RASSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNK 102 (427)
T ss_pred cccchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHH
Confidence 45589999999999999999999999999999999999999999999999999999998873 45678999999999999
Q ss_pred HHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCC
Q 013839 100 ESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKS 179 (435)
Q Consensus 100 ~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 179 (435)
..+++.+|.++..++++++..+.+.+||+|+...+.|++.+-++..|.+|+|+|.++..++..+|..+..|...++.+.+
T Consensus 103 ~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~g 182 (427)
T KOG1411|consen 103 LSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRG 182 (427)
T ss_pred HHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccc
Confidence 99999999999889999999999999999999999999999999999999999999999999999999999888888899
Q ss_pred cChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcC
Q 013839 180 LDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDE 259 (435)
Q Consensus 180 ~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 259 (435)
+|.+.+.+.+.+.++...+++--..|||||+..+.++|++|.++.++.+.+.+.|.+|++|..++.+.|..+++.|.+.+
T Consensus 183 ld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g 262 (427)
T KOG1411|consen 183 LDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDG 262 (427)
T ss_pred cchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcC
Confidence 99999999999887777777777889999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 013839 260 HLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMA 339 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~ 339 (435)
.+++++.|++|.+|+.|.|+|.+.++|.+.+...++.++++.+.+.+++++|..+...++..|.++++..+|...++.+.
T Consensus 263 ~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~Ma 342 (427)
T KOG1411|consen 263 HEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMA 342 (427)
T ss_pred CceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHH
Confidence 99999999999999999999999889999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHHHH
Q 013839 340 DRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 340 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~~~ 419 (435)
+|+...|+.|.+.|+..+.+..|.++..|-|+|.|.|+++++++.|.++++|+++..||||+++++..++.++.++|.++
T Consensus 343 dRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT~dGRiS~aG~ss~nV~yLa~aih~v 422 (427)
T KOG1411|consen 343 DRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLTKDGRISMAGLSSSNVPYLADAIHAV 422 (427)
T ss_pred HhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeeccCceEeeccccccCCcccchhhHhH
Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999998876
Q ss_pred HH
Q 013839 420 TR 421 (435)
Q Consensus 420 l~ 421 (435)
.+
T Consensus 423 tk 424 (427)
T KOG1411|consen 423 TK 424 (427)
T ss_pred hc
Confidence 54
No 7
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-52 Score=362.63 Aligned_cols=402 Identities=41% Similarity=0.741 Sum_probs=374.9
Q ss_pred ccccccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhc--CCCCCCCCCCcccHHHHH
Q 013839 22 TVGWWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA--GSEFLESISASVSTKMVE 99 (435)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~g~~~lr~ 99 (435)
++++|+.++..++..++.+.+.++++.++.+++|++|.|.++++.|++.++++++...+. ....+.|.|..|++.++.
T Consensus 2 ~~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~ 81 (410)
T KOG1412|consen 2 SMSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTK 81 (410)
T ss_pred CcchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhh
Confidence 568899999999999999999999999999999999999999999999999999888886 346788999999999999
Q ss_pred HHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCC-CeeeeeecCCCCC
Q 013839 100 ESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQI-PERTYHYYDPDSK 178 (435)
Q Consensus 100 ~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~ 178 (435)
+.++.+.+.+...++++++..+.+.+||+|+.+.+.|++.+-+..+|.+..|+|.++..+++..|. ++..|+.++.++.
T Consensus 82 ~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k 161 (410)
T KOG1412|consen 82 AATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENK 161 (410)
T ss_pred hhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCc
Confidence 999999999999999999999999999999999999988877888999999999999999999995 5677888888889
Q ss_pred CcChHhHHHHhhcCCCCcEEEEeCC-CCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhh
Q 013839 179 SLDFAALMDDIKNAPDSSFFLLHPS-AHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE 257 (435)
Q Consensus 179 ~~d~e~l~~~i~~~~~~~~~v~~~~-p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~ 257 (435)
++|++.+...++.+|... ++++.. .|||||+..+.++|..|++..++.+++.+.|-+|++|..++++.|.|.++.+.+
T Consensus 162 ~~d~e~~Lsdl~~APe~s-i~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~ 240 (410)
T KOG1412|consen 162 CVDLEGFLSDLESAPEGS-IIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVE 240 (410)
T ss_pred eecHHHHHHHHhhCCCCc-EEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHh
Confidence 999999999999886554 444554 499999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 013839 258 DEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKI 337 (435)
Q Consensus 258 ~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~ 337 (435)
.+...+++.||+|.||+.+.|+|-+.++..++.....+.+++....+..+++||..+.+++...|..++++++|...++.
T Consensus 241 ~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~ 320 (410)
T KOG1412|consen 241 QGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKT 320 (410)
T ss_pred cCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHH
Confidence 88889999999999999999999998888788877778888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHH
Q 013839 338 MADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIH 417 (435)
Q Consensus 338 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~ 417 (435)
+..|+++.|..|++.|..++.|+.|+.+..|.|||.+.|+++.+++.|.++++|++.+.|||++++++..++++..++|.
T Consensus 321 MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkAId 400 (410)
T KOG1412|consen 321 MSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKAID 400 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh
Q 013839 418 EVTRSEQ 424 (435)
Q Consensus 418 ~~l~~~~ 424 (435)
+.++...
T Consensus 401 e~Vr~~~ 407 (410)
T KOG1412|consen 401 ETVRAIK 407 (410)
T ss_pred HHHHhhc
Confidence 9987655
No 8
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-51 Score=376.50 Aligned_cols=365 Identities=13% Similarity=0.068 Sum_probs=289.7
Q ss_pred ccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhH
Q 013839 26 WDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLV 105 (435)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 105 (435)
.+++....++...+..+...+...+.. |+.|.| ++ ++|.-+...+...+......+|.+..|+|+|+++|++.+
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e~~~~~~--LgqGfp-~~---~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~ 82 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAEHKVPNP--LGQGFP-DF---PPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAY 82 (420)
T ss_pred cccccccCCcHHHHHHHHHHhcCCCCc--ccCCCC-CC---CCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHH
Confidence 344444555433333333333222222 999997 65 444444444444444445788999999999999999998
Q ss_pred cCCCCcc-ccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeec------CCCCC
Q 013839 106 YGKDSDV-VKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYY------DPDSK 178 (435)
Q Consensus 106 ~~~~~~~-~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~------~~~~~ 178 (435)
...++.- ...++|. +|.|+++++..+ ++.++++||+|++.+|.|..|...+.++|.+++.++.. ..++|
T Consensus 83 se~~~~~~~~~~eVl--VT~GA~~ai~~~--~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~ 158 (420)
T KOG0257|consen 83 SEFYGGLLDPDDEVL--VTAGANEAISSA--LLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDW 158 (420)
T ss_pred HHHhccccCCcccEE--EecCchHHHHHH--HHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccc
Confidence 4322221 2256788 999999999877 89999999999999999999999999999999999985 35669
Q ss_pred CcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhc
Q 013839 179 SLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLED 258 (435)
Q Consensus 179 ~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 258 (435)
.+|.++++.++. ++|++|++|+||||||.++++++|++|+++|++||+++|.||+|..+.+++ .++..+..+++.
T Consensus 159 ~~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~--~~h~r~aslPgm 233 (420)
T KOG0257|consen 159 TLDPEELESKIT---EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDG--NKHIRIASLPGM 233 (420)
T ss_pred cCChHHHHhhcc---CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCC--CcceeeecCCch
Confidence 999999999999 789999999999999999999999999999999999999999999999986 335566666888
Q ss_pred CCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhh-HH-HHHHHHH
Q 013839 259 EHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNL-KS-LWIDEVK 336 (435)
Q Consensus 259 ~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l-~~-~~~~~~~ 336 (435)
.++++.++|+||+||++|||+||+++ ++. +...+...++.....++++.|.|.++++..+.. .. .-.....
T Consensus 234 ~ertitvgS~gKtf~~TGWrlGW~ig---p~~----L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~ 306 (420)
T KOG0257|consen 234 YERTITVGSFGKTFGVTGWRLGWAIG---PKH----LYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFIT 306 (420)
T ss_pred hheEEEeccccceeeeeeeeeeeeec---hHH----hhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHH
Confidence 99999999999999999999999975 888 889899988888889999999998888765420 00 0003345
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC--------H---------HHHHHHhhhccEEEeCCC--
Q 013839 337 IMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT--------P---------YQVDRLAKEFHIYMTQDG-- 397 (435)
Q Consensus 337 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~--------~---------~~~~~ll~~~gI~i~pgg-- 397 (435)
.+.+.|+++|+.+.+.|.++| +++..|+|++|+|++++ . .++..++++.|+.+.|+.
T Consensus 307 ~~~~~y~~krdil~k~L~~lg----~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF 382 (420)
T KOG0257|consen 307 ELVKEYKEKRDILAKALEELG----LKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAF 382 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhc
Confidence 589999999999999999998 56899999999999653 1 245788888999998862
Q ss_pred -------------cEEeccCCCCcHHHHHHHHH
Q 013839 398 -------------RISMAGVTTGNVNYLANAIH 417 (435)
Q Consensus 398 -------------Ris~~~~~~e~i~~~~~~l~ 417 (435)
|++++. +++.++.++++|+
T Consensus 383 ~s~~~~~~~~~~~r~~~~k-~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 383 GSREHIKVAERLVRFCFCK-ADETLRKAIERLK 414 (420)
T ss_pred CCchhhHHHHHHHHHHHHh-hHHHHHHHHHHHh
Confidence 777755 6777777777776
No 9
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=5e-50 Score=392.91 Aligned_cols=363 Identities=13% Similarity=0.080 Sum_probs=291.6
Q ss_pred ccccccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHH
Q 013839 22 TVGWWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEES 101 (435)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 101 (435)
++.+.+++...+.+.+..+.... ..++.|+|+.|.| +. +.++...+.+.+.+..+ ..+|++..|.++||+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~G~P-~~---~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~ai 100 (413)
T PLN00175 29 PLQVAKRLEKFKTTIFTQMSSLA---IKHGAINLGQGFP-NF---DGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAI 100 (413)
T ss_pred ccchhHHhhcCCCCHHHHHHHHh---hcCCeEecCCCCC-CC---CCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHH
Confidence 33445555555655443333333 3458999999997 43 33333333333333333 46799999999999999
Q ss_pred HHhHcCCCCccccCC-CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCc
Q 013839 102 VKLVYGKDSDVVKEG-RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSL 180 (435)
Q Consensus 102 a~~l~~~~~~~~~~~-~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 180 (435)
++++....+..++++ +|. +|+|+++|+.++ +.++++|||+|++++|+|..+...++..|++++.+++. ++++++
T Consensus 101 a~~~~~~~g~~~~~~~~I~--vt~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~~ 175 (413)
T PLN00175 101 AERFKKDTGLVVDPEKEVT--VTSGCTEAIAAT--ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLR-PPDFAV 175 (413)
T ss_pred HHHHHHHhCCCCCCCCCEE--EeCCHHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECC-cccCCC
Confidence 999954433345566 688 899999999888 77778999999999999999999999999999999983 445899
Q ss_pred ChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCC
Q 013839 181 DFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEH 260 (435)
Q Consensus 181 d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 260 (435)
|+++|++.+. ++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++ ...++..+.+..+
T Consensus 176 ~~~~l~~~~~---~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~---~~~s~~~~~~~~~ 249 (413)
T PLN00175 176 PEDELKAAFT---SKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG---DHISMASLPGMYE 249 (413)
T ss_pred CHHHHHHhcC---cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC---cccChhhCCCCcC
Confidence 9999999987 578999999999999999999999999999999999999999999998863 2234444544457
Q ss_pred eEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 013839 261 LIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMAD 340 (435)
Q Consensus 261 ~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~ 340 (435)
++|+++||||.|+++|+|+||+++ +++ +++.+.+.......+++.+.|.++..+|.+.+ .++++.++
T Consensus 250 ~vi~i~SfSK~~~~~G~RiG~~v~---~~~----l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~------~~~~~~~~ 316 (413)
T PLN00175 250 RTVTMNSLGKTFSLTGWKIGWAIA---PPH----LTWGVRQAHSFLTFATATPMQWAAVAALRAPE------SYYEELKR 316 (413)
T ss_pred cEEEEecchhhccCcchheeeeEe---CHH----HHHHHHHHHhhccCCCCHHHHHHHHHHHhCCH------HHHHHHHH
Confidence 899999999999999999999974 888 88888887766678899999999999997653 67888999
Q ss_pred HHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC------C-HHHHHHHhhhccEEEeCC---------C----cEE
Q 013839 341 RIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL------T-PYQVDRLAKEFHIYMTQD---------G----RIS 400 (435)
Q Consensus 341 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~------~-~~~~~~ll~~~gI~i~pg---------g----Ris 400 (435)
.|+++++.+.+.|++.| +.+..+++|+|+|+.+ + .+++..+++++||.+.|| + ||+
T Consensus 317 ~~~~~~~~l~~~L~~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls 392 (413)
T PLN00175 317 DYSAKKDILVEGLKEVG----FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFA 392 (413)
T ss_pred HHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEE
Confidence 99999999999999886 4577889999999864 2 346677877889999986 1 999
Q ss_pred eccCCCCcHHHHHHHHHHHHH
Q 013839 401 MAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 401 ~~~~~~e~i~~~~~~l~~~l~ 421 (435)
++. +++++++++++|+++++
T Consensus 393 ~~~-~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 393 FCK-DEETLRAAVERMKTKLK 412 (413)
T ss_pred EcC-CHHHHHHHHHHHHHHHh
Confidence 986 88999999999998875
No 10
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-48 Score=383.61 Aligned_cols=347 Identities=14% Similarity=0.157 Sum_probs=279.6
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg 126 (435)
.+++.++|+.|.| +. +.+...++++.+.+......+|+++.|.++||+++++++....+..++++ +|+ +|+|+
T Consensus 31 ~~~~~~~l~~g~p-~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~--it~G~ 104 (403)
T PRK08636 31 AGEDIIDFSMGNP-DG---PTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVV--ATMGS 104 (403)
T ss_pred cCCCEEEcCCcCC-CC---CCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEE--ECCCh
Confidence 4578999999997 32 33555666666655443357799999999999999999854433334566 798 99999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhH----HHHhhcCCCCcEEEEeC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAAL----MDDIKNAPDSSFFLLHP 202 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l----~~~i~~~~~~~~~v~~~ 202 (435)
++++.++ +.+++.+||+|++++|+|+.+...++..|++++.+++..++++++|++.+ ++++++..+++++++++
T Consensus 105 ~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~ 182 (403)
T PRK08636 105 KEGYVHL--VQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVN 182 (403)
T ss_pred HHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEe
Confidence 9999988 77788999999999999999999999999999999873234589998865 45454434578999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEE
Q 013839 203 SAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCL 282 (435)
Q Consensus 203 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~ 282 (435)
+||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ..+++..+....+++++++||||.||+||+|+||+
T Consensus 183 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i 260 (403)
T PRK08636 183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFV 260 (403)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcCCCccccEEEEEecccccCCccceeeee
Confidence 9999999999999999999999999999999999999987641 22344444333467889999999999999999999
Q ss_pred EEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 013839 283 SILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNW 362 (435)
Q Consensus 283 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 362 (435)
++ +++ +++.+.+.......+++.+.|.++..++... .+++++.++.++++++.+.+.|++.+ +
T Consensus 261 v~---~~~----li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~----~ 323 (403)
T PRK08636 261 VG---NKK----LVGALKKIKSWLDYGMFTPIQVAATIALDGD------QSCVEEIRETYRKRRDVLIESFANAG----W 323 (403)
T ss_pred eC---CHH----HHHHHHHHHHHhcccCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHHHCC----C
Confidence 64 888 8888877665545677788888887777543 26788899999999999999999875 4
Q ss_pred cccccCcceeEecCCC--------HHHHHHHhhhccEEEeCC---C-------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 363 EHITNQLGMFCFSGLT--------PYQVDRLAKEFHIYMTQD---G-------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 363 ~~~~~~~g~~~~~~~~--------~~~~~~ll~~~gI~i~pg---g-------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
.+..+++|+|+|+.+. .+++..+++++||.+.|| | ||+++. +++++++++++|+++++.
T Consensus 324 ~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 324 ELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIE-NENRIRQAARNIKKFLKE 400 (403)
T ss_pred cccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 5778899999999763 345567777799999997 1 999984 889999999999999865
No 11
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3.6e-48 Score=383.47 Aligned_cols=358 Identities=10% Similarity=0.089 Sum_probs=283.1
Q ss_pred CCCCCeeeeecceecCCC-CCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDK-GRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
..++++|+|+.|+| +.. .+.++.++.+.+...+..+...+|.+..|.++||+++|+++....+..+++++|+ +|+|
T Consensus 63 ~~~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~--it~G 139 (462)
T PLN02187 63 DVNKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIF--LTAG 139 (462)
T ss_pred CCCCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEE--EeCC
Confidence 45689999999987 422 2344555655555555545456799999999999999999955444456789999 9999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAH 205 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~ 205 (435)
+++++.++ +..+++|||+|++++|+|+.|...++..|++++.+++.++++|++|+++|++++. ++++++++++||
T Consensus 140 ~~~al~~~--~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~v~i~nP~ 214 (462)
T PLN02187 140 CNQGIEIV--FESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD---ENTVAMVVINPN 214 (462)
T ss_pred HHHHHHHH--HHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC---CCcEEEEEeCCC
Confidence 99999998 7777899999999999999999999999999999988544579999999999886 578999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEE
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSIL 285 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~ 285 (435)
||||.+++.+++++|+++|++|+++||+||+|.++.|++. ...++..+.. ..++|+++||||.|++||+|+||+++
T Consensus 215 NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~--~~~s~~~~~~-~~~vi~l~SfSK~f~~pGlRiG~~v~- 290 (462)
T PLN02187 215 NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN--PFVSMGKFAS-IVPVLTLAGISKGWVVPGWKIGWIAL- 290 (462)
T ss_pred CCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CceeHHHhcc-CCcEEEEecchhhcCCccceeEEEEe-
Confidence 9999999999999999999999999999999999988642 2234444432 25799999999999999999999973
Q ss_pred ecChhHHHHHHHHHHHHhhcccc--CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc
Q 013839 286 CVDSKQAAAIRSQIQQIARAMYG--SPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWE 363 (435)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 363 (435)
.+++....++..+......... +++.+.|.++..+|.+.. .+++++.++.++++++.+.+.|++++. ...
T Consensus 291 -~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~-----~~~l~~~~~~l~~~r~~l~~~L~~~~~--~~~ 362 (462)
T PLN02187 291 -NDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD-----KNFFAKKNKILKHNVDLVCDRLKDIPC--VVC 362 (462)
T ss_pred -cCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHHHHHhhCCC--CcC
Confidence 2333222234455554443322 458999999999997521 277888999999999999999998752 112
Q ss_pred ccccCcceeEecCC---------CH-HHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHHHHHHHhhhh
Q 013839 364 HITNQLGMFCFSGL---------TP-YQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 364 ~~~~~~g~~~~~~~---------~~-~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
...|++|+|+|+.+ +. +++..+++++||.+.||. ||+++. +++++++++++|+++++....
T Consensus 363 ~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 363 PKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred CCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhhh
Confidence 34678999999854 22 456777788999999982 999986 788999999999999976553
No 12
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.3e-48 Score=381.49 Aligned_cols=342 Identities=12% Similarity=0.107 Sum_probs=268.9
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg 126 (435)
.+.++|+|+.|++ +. ++++...+.+...+......+|+++.|.++||+++++++....+..++++ +|. +|+|+
T Consensus 28 ~~~~~i~l~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~--it~Gs 101 (388)
T PRK07366 28 AGKELIDLSLGSS-DL---PAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVL--PLIGS 101 (388)
T ss_pred cCCCeEEeCCCCC-CC---CCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEE--ECCCc
Confidence 4678999999996 32 33444444444344333356799999999999999999955444445577 688 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN 206 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N 206 (435)
++++.++ +..++.+||+|++++|+|+.+...++..|++++.+++.+++++.+|++++++.+. ++++++++++|||
T Consensus 102 ~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~N 176 (388)
T PRK07366 102 QEGTAHL--PLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL---AQARLMVLSYPHN 176 (388)
T ss_pred HHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc---ccceEEEEeCCCC
Confidence 9999988 6777899999999999999999999999999999998434457889999988776 5678999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
|||.+++.+++++|+++|++|+++||+||+|.++.+++. ...+++..+....+++|+++||||.||+||+|+||+++
T Consensus 177 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-- 253 (388)
T PRK07366 177 PTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGE-VEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-- 253 (388)
T ss_pred CCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCC-CCCCChhhCCCCcccEEEEeecccccCCcchhheehcC--
Confidence 999999999999999999999999999999999987642 11233433333345789999999999999999999974
Q ss_pred cChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
+++ +++.+.+.......+.+...+.++.+.+.+. ++++++.++.++++++.+.+.|++++ +.+..
T Consensus 254 -~~~----li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~------~~~l~~~~~~~~~~r~~l~~~L~~~~----~~~~~ 318 (388)
T PRK07366 254 -NAQ----LIQALRQVKAVVDFNQYRGILNGAIAALTGP------QATVQQTVQIFRQRRDAFINALHQIG----WPVPL 318 (388)
T ss_pred -CHH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHHHCC----CcccC
Confidence 888 8888887665444444333344444444432 27788999999999999999999876 45667
Q ss_pred cCcceeEecCCC-------HHHHHHHhhhccEEEeCC---C-------cEEeccCCCCcHHHHHHHHHHH
Q 013839 367 NQLGMFCFSGLT-------PYQVDRLAKEFHIYMTQD---G-------RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 367 ~~~g~~~~~~~~-------~~~~~~ll~~~gI~i~pg---g-------Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
+++|+|+|+.+. .++++.+++++||.+.|| | ||+++. +++++++++++|+++
T Consensus 319 p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 319 PEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAF 387 (388)
T ss_pred CCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 899999999662 234567777889999997 1 999986 788999999999875
No 13
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-48 Score=381.04 Aligned_cols=338 Identities=16% Similarity=0.137 Sum_probs=274.6
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhc-CCCCCCCCCCcccHHHHHHHHHhHcCCCCccccC-CCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA-GSEFLESISASVSTKMVEESVKLVYGKDSDVVKE-GRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~v~~~~t~g 125 (435)
.+++.|+|+.|.| +. ++ ++.+.+++.... ....+.|+ ..|.++||++|++++...++..+++ ++|+ +|+|
T Consensus 30 ~~~~~i~l~~g~p-~~---~~-~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~--it~G 101 (399)
T PRK07681 30 AGHKMIDLSIGNP-DM---PP-ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVL--LLMG 101 (399)
T ss_pred cCCCeEEeCCCCC-CC---CC-CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEE--ECCC
Confidence 3578999999996 32 22 334454444433 32234465 4899999999999996544444567 7898 9999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAH 205 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~ 205 (435)
+++++.++ +.+++.+||+|++++|+|+.|...++..|++++.+++.+++++.+|++++++++. ++++++++++||
T Consensus 102 ~~~al~~~--~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~ 176 (399)
T PRK07681 102 SQDGLVHL--PMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA---DKAKMMILNFPG 176 (399)
T ss_pred cHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCC
Confidence 99999888 6777899999999999999999999999999999998434457889999998886 578999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEE
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSIL 285 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~ 285 (435)
||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+....+++|+++||||.||++|+|+||+++
T Consensus 177 NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~- 253 (399)
T PRK07681 177 NPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG- 253 (399)
T ss_pred CCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCCCcccEEEEeecccccCCccceeEEEec-
Confidence 9999999999999999999999999999999999987642 2223333333456899999999999999999999974
Q ss_pred ecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc
Q 013839 286 CVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI 365 (435)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 365 (435)
+++ +++.+.+.......+++.+.|.++..+|.+.. +++++.++.++++++.+.+.|++.| +.+.
T Consensus 254 --~~~----l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~ 317 (399)
T PRK07681 254 --NEE----IVRALTQFKSNTDYGVFLPIQKAACAALRNGA------AFCEKNRGIYQERRDTLVDGFRTFG----WNVD 317 (399)
T ss_pred --CHH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHHCC----Cccc
Confidence 888 88888877665566888999999999998753 6778888899999999999999876 4566
Q ss_pred ccCcceeEecCC----C-HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHH
Q 013839 366 TNQLGMFCFSGL----T-PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHE 418 (435)
Q Consensus 366 ~~~~g~~~~~~~----~-~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~ 418 (435)
.+++|+|+|+.+ + .+++..+++++||.+.||. ||+++. +++++++++++|++
T Consensus 318 ~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~ 384 (399)
T PRK07681 318 KPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN 384 (399)
T ss_pred CCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 788999999865 2 3456777776899999871 999985 77999999999988
No 14
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=5.6e-48 Score=385.68 Aligned_cols=365 Identities=16% Similarity=0.148 Sum_probs=282.5
Q ss_pred CCCCeeeeecceecC---------------CCCCc----------ccchHHHHHHHHhcC--CCCCCCCCCcccHHHHHH
Q 013839 48 PSPYKINLGVGAYRD---------------DKGRP----------VVLQCVREAEAKIAG--SEFLESISASVSTKMVEE 100 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~---------------~~~~~----------~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ 100 (435)
++.++|+|++|+|.+ +..+. .|...++++...+.. .....|+++.|.++||++
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 123 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA 123 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence 457999999999821 21110 134555555443332 234669999999999999
Q ss_pred HHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHh-CCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCC
Q 013839 101 SVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRF-HPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKS 179 (435)
Q Consensus 101 ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 179 (435)
|++++...++.++++++|+ +|+|+++++.++ +..++ ++||+|++++|+|+.|...++..|++++.+++..+++|+
T Consensus 124 ia~~~~~~~g~~~~~~~I~--it~Ga~~al~~~--~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~ 199 (481)
T PTZ00377 124 VAAFIERRDGVPKDPSDIF--LTDGASSGIKLL--LQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWS 199 (481)
T ss_pred HHHHHHHhcCCCCChhhEE--EcCCHHHHHHHH--HHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCC
Confidence 9999965545556689999 999999999998 66677 699999999999999999999999999999985445689
Q ss_pred cChHhHHHHhhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh-
Q 013839 180 LDFAALMDDIKNA---PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF- 255 (435)
Q Consensus 180 ~d~e~l~~~i~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~- 255 (435)
+|+++|++.+... ..+++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.|++. ....++...
T Consensus 200 ~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~-~~~~s~~~~~ 278 (481)
T PTZ00377 200 LDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE-KPFISFRKVL 278 (481)
T ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC-CCcccHHHHH
Confidence 9999999998631 12688888899999999999999999999999999999999999999988421 122233221
Q ss_pred ---hhc---CCeEEEEeccccc-ccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCCh---
Q 013839 256 ---LED---EHLIGCAQSYAKS-MGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDP--- 325 (435)
Q Consensus 256 ---~~~---~~~~i~~~s~SK~-~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~--- 325 (435)
... ..++|+++||||. ++++|||+||+++...+++ +++++.+.+. ...+++.++|.++..+|..+
T Consensus 279 ~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~----li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~ 353 (481)
T PTZ00377 279 LELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPE----VREQIYKLAS-INLCSNVVGQLMTGLMCNPPREG 353 (481)
T ss_pred HhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHH----HHHHHHHHhh-eecCCChHHHHHHHHHhCCCCCC
Confidence 111 2369999999997 6999999999963113777 8888888664 34568899999999999642
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC-----------------HHHHHHHhh
Q 013839 326 -NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT-----------------PYQVDRLAK 387 (435)
Q Consensus 326 -~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-----------------~~~~~~ll~ 387 (435)
...+.+.+++++.++.++++++.+.+.|++++ ++.+..++||||+|+.+. .+++..+++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~---g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~ 430 (481)
T PTZ00377 354 DASYPLYKRERDAIFTSLKRRAELLTDELNKIE---GVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLE 430 (481)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHH
Confidence 12233445666667788999999999998873 267888999999996531 224567888
Q ss_pred hccEEEeCCC-----------cEEeccCCCCcHHHHHHHHHHHHHhhhhh
Q 013839 388 EFHIYMTQDG-----------RISMAGVTTGNVNYLANAIHEVTRSEQET 426 (435)
Q Consensus 388 ~~gI~i~pgg-----------Ris~~~~~~e~i~~~~~~l~~~l~~~~~~ 426 (435)
++||.+.||. |+||+ .+++++++++++|++++++..++
T Consensus 431 ~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 431 STGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred HcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999872 99998 47789999999999999876544
No 15
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-48 Score=378.08 Aligned_cols=353 Identities=15% Similarity=0.159 Sum_probs=282.6
Q ss_pred CCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcc
Q 013839 33 AKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDV 112 (435)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 112 (435)
....+.+..+..+ ..++.|+|+.|+| +. ++++..++++....... ...|+++.|.++||+++++++....+..
T Consensus 14 ~~~~~~~~~~~~~--~~~~~i~l~~g~p-~~---~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~ 86 (384)
T PRK06348 14 EVNIMAEIATLAK--KFPDIIDLSLGDP-DL---ITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYDLS 86 (384)
T ss_pred CccHHHHHHHHHH--hcCCcEEcCCCCC-CC---CCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCC
Confidence 3333434444432 2357899999996 33 33444555555554433 5679999999999999999995444444
Q ss_pred ccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC
Q 013839 113 VKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA 192 (435)
Q Consensus 113 ~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~ 192 (435)
+++++|+ +|+|+++|+.++ +.+++.+||+|++++|+|.++...++..|++++.++..+++++++|++++++.+.
T Consensus 87 ~~~~~i~--it~G~~~al~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-- 160 (384)
T PRK06348 87 FKRNEIM--ATVGACHGMYLA--LQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT-- 160 (384)
T ss_pred CChhhEE--EcCChHHHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC--
Confidence 5688999 999999999988 7777899999999999999999999999999999987445568899999999886
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc
Q 013839 193 PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 193 ~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 272 (435)
++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++ ...++..+....+++|+++||||.+
T Consensus 161 -~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~~ 236 (384)
T PRK06348 161 -SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE---DFVPMATLAGMPERTITFGSFSKDF 236 (384)
T ss_pred -cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC---CccchhhcCCCcCcEEEEecchhcc
Confidence 567888999999999999999999999999999999999999999998763 2223444433357899999999999
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQN 352 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 352 (435)
|+||+|+||+++ +++ +++.+.........+++.++|.++..++...+ +++++.++.++++++.+.+.
T Consensus 237 ~l~GlRiG~~v~---~~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~r~~~~~~~ 303 (384)
T PRK06348 237 AMTGWRIGYVIA---PDY----IIETAKIINEGICFSAPTISQRAAIYALKHRD------TIVPLIKEEFQKRLEYAYKR 303 (384)
T ss_pred CCccccceeeec---CHH----HHHHHHHHHHhccCCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHH
Confidence 999999999974 787 88888877766566789999999999987543 67788899999999999999
Q ss_pred HHhhCCCCCccccccCcceeEecCC-----CH-HHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHH
Q 013839 353 LEKLGSSLNWEHITNQLGMFCFSGL-----TP-YQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAI 416 (435)
Q Consensus 353 l~~~~~~~~~~~~~~~~g~~~~~~~-----~~-~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l 416 (435)
|+.++ .+.+..+++|+|+|+.+ +. +++..+++++||.+.||. |++++. +++++++++++|
T Consensus 304 L~~~~---~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l 379 (384)
T PRK06348 304 IESIP---NLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFNRI 379 (384)
T ss_pred HhcCC---CceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHHHHHHHHHHH
Confidence 98763 25677889999999754 33 455667777899999872 999975 888899999988
Q ss_pred HHH
Q 013839 417 HEV 419 (435)
Q Consensus 417 ~~~ 419 (435)
+++
T Consensus 380 ~~~ 382 (384)
T PRK06348 380 EKM 382 (384)
T ss_pred Hhh
Confidence 754
No 16
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-48 Score=378.50 Aligned_cols=345 Identities=14% Similarity=0.093 Sum_probs=276.5
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccC-CCeeeEecCCchh
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKE-GRSAGVQALSGTG 128 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~v~~~~t~gg~~ 128 (435)
++.|+|+.|.| +. .++++...+.+...+.......|++..|.++||++|++++....+.++.+ ++|+ +|+|+++
T Consensus 39 ~~~i~l~~g~~-~~--~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~--it~Ga~~ 113 (405)
T PRK06207 39 GRPVDFSHGDV-DA--HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELI--ITPGTQG 113 (405)
T ss_pred CCceecCCcCC-CC--CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEE--EeCCcHH
Confidence 58899999997 32 13334455555555443334679999999999999999985443333456 7898 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecC---CCCCCcChHhHHHHhhcCCCCcEEEEeCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYD---PDSKSLDFAALMDDIKNAPDSSFFLLHPSAH 205 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~ 205 (435)
++.++ +..++.+||+|++++|+|+.+...++..|++++.+++.. ++++++|+++|++++. ++++++++++||
T Consensus 114 al~~~--~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~ 188 (405)
T PRK06207 114 ALFLA--VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK---AGVRVFLFSNPN 188 (405)
T ss_pred HHHHH--HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh---hcCeEEEECCCC
Confidence 99888 777789999999999999999999999999999998731 2358999999999887 568899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEE
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSIL 285 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~ 285 (435)
||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+....+++++++||||.|+++|+|+||+++
T Consensus 189 NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~- 265 (405)
T PRK06207 189 NPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT--SYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG- 265 (405)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc-
Confidence 9999999999999999999999999999999999988642 2223333333357899999999999999999999964
Q ss_pred ecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc
Q 013839 286 CVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI 365 (435)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 365 (435)
+++ +++.+.+.......+.+.+.|.++..+|.+.. .++++.+++++++++.+.+.|+.++ .+.+.
T Consensus 266 --~~~----l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~r~~l~~~L~~~~---~~~~~ 330 (405)
T PRK06207 266 --SPA----IIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPD------GWMKDRIARHQAIRDDLLRVLRGVE---GVFVR 330 (405)
T ss_pred --CHH----HHHHHHHHHhHhccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHhcCC---Cceec
Confidence 888 88888877766666788899999999997642 3455666777888888999998763 25677
Q ss_pred ccCcceeEecCCC-----HH-HHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 366 TNQLGMFCFSGLT-----PY-QVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 366 ~~~~g~~~~~~~~-----~~-~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
.+++|+|+|+.+. .+ +...+++++||.+.||. ||+++. +.+++++++++|++++++.
T Consensus 331 ~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 331 APQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred CCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 7899999999762 23 45666567899999972 999987 7899999999999988653
No 17
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=9.8e-48 Score=378.02 Aligned_cols=355 Identities=12% Similarity=0.100 Sum_probs=282.9
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchh
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTG 128 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~ 128 (435)
+.++|+|+.|+|.-.+.++++++..+.+...+..+....|++..|.+++|+++++++....+..+++++|+ +|+|+++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~--it~G~~~ 128 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIY--LTAGCAQ 128 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEE--EeCCHHH
Confidence 67899999999732323455556655555555544355799999999999999999965555556788999 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT 208 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt 208 (435)
|+.++ +..++.+||+|++++|+|+.|.......|++++.+++..+++|++|++.+++.++ ++++++++++|||||
T Consensus 129 al~l~--~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~P~NPt 203 (430)
T PLN00145 129 AIEII--MSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD---ENTVAMVIINPNNPC 203 (430)
T ss_pred HHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC---cCceEEEEeCCCCCC
Confidence 99998 6666789999999999999999999999999999987545578999999999887 678999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecC
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVD 288 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~ 288 (435)
|.+++.+++++|+++|+++|++||+||+|.++.|++ ....++..+. ...++|+++||||.|++||||+||+++ ..+
T Consensus 204 G~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~--~~~~~~~~~~-~~~~vi~~~S~SK~~~~pG~RlG~iv~-~~~ 279 (430)
T PLN00145 204 GSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS--KPFVPMGVFG-EVAPVLTLGSISKRWVVPGWRLGWIAT-CDP 279 (430)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCC--CCccchhhhc-ccCcEEEEeccccccCCCCeeEEEEEE-ecc
Confidence 999999999999999999999999999999998864 1223443442 346899999999999999999999974 223
Q ss_pred hhHHH--HHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc-c
Q 013839 289 SKQAA--AIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEH-I 365 (435)
Q Consensus 289 ~~~~~--~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~ 365 (435)
+...+ .++..++... ....+++.+.|.++..+|.+.. +++.++.+++++++++.+.+.|++++. +.+ .
T Consensus 280 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~~~~g---~~~~~ 350 (430)
T PLN00145 280 NGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTK-----EEFFTKTLGLLKETADICYEKIKEIKC---ITCPH 350 (430)
T ss_pred hhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCc
Confidence 33111 1234444443 3444678899999999997531 367888899999999999999988732 343 4
Q ss_pred ccCcceeEecCCC----------HHHHHHHhhhccEEEeCC---C-----cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 366 TNQLGMFCFSGLT----------PYQVDRLAKEFHIYMTQD---G-----RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 366 ~~~~g~~~~~~~~----------~~~~~~ll~~~gI~i~pg---g-----Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
.|++++|+|+.++ .+++.++++++||.+.|| | ||+|+. ++++++.++++|++++.+..
T Consensus 351 ~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 351 KPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred CCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhc
Confidence 6899999998653 246678888899999998 2 999986 88889999999999987654
No 18
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=7.4e-48 Score=387.90 Aligned_cols=374 Identities=12% Similarity=0.083 Sum_probs=287.6
Q ss_pred ccccCCCCCCchh---hHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHH
Q 013839 26 WDHVAPAAKDPIN---GVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESV 102 (435)
Q Consensus 26 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 102 (435)
.+++...+.+... ...++. +..++++|+|+.|+| +..++++|...++++..++.. ...|++..|.++||++|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReaia 195 (517)
T PRK13355 120 SHKLDNVLYDVRGPVVDEANRM-EAAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTD--TEGYSDSKGLFSARKAIM 195 (517)
T ss_pred hHHhhccCccHHHHHHHHHHHH-HHcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhc--CCCCCCCcChHHHHHHHH
Confidence 4444444444332 333333 235689999999997 433455677777777666643 456999999999999999
Q ss_pred HhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcCh
Q 013839 103 KLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDF 182 (435)
Q Consensus 103 ~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 182 (435)
+++...+...+++++|+ +|+|+++++.++ +.+++++||+|++++|+|+.|...++..|++++.+++..+++|.+|+
T Consensus 196 ~~~~~~~~~~~~~~~I~--it~G~~eal~~~--~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~ 271 (517)
T PRK13355 196 QYAQLKGLPNVDVDDIY--TGNGVSELINLS--MSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDI 271 (517)
T ss_pred HHHHhcCCCCCChhHEE--EeCcHHHHHHHH--HHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCH
Confidence 99955444346689999 999999999888 67778999999999999999999999999999999884445689999
Q ss_pred HhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeE
Q 013839 183 AALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLI 262 (435)
Q Consensus 183 e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (435)
+++++++. +++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+. ....+
T Consensus 272 ~~l~~~~~---~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~--~~~s~~~~~-~~~~v 345 (517)
T PRK13355 272 DDIRSKIT---SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGL--EHTSIASLA-PDLFC 345 (517)
T ss_pred HHHHHhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC--CcccHHHhC-CCCeE
Confidence 99999887 6789999999999999999999999999999999999999999999988642 233443332 22357
Q ss_pred EEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 013839 263 GCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRI 342 (435)
Q Consensus 263 i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~ 342 (435)
++++||||.|+++|||+||+++ ..+++....++..+.... ....+++.++|.++..+|..... +.++++.. +++
T Consensus 346 i~~~S~SK~~~~~G~RiG~~i~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~---~~~~~~~~-~~~ 419 (517)
T PRK13355 346 VTFSGLSKSHMIAGYRIGWMIL-SGNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQS---VKDYLVPG-GRV 419 (517)
T ss_pred EEEecchhhccCcccceEEEEe-eCchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCcc---HHHHHHHH-HHH
Confidence 8889999999999999999974 224553334555554433 33456888999999999965321 23455544 344
Q ss_pred HHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC---------HHHHHHHhhhccEEEeCCC----------cEEecc
Q 013839 343 QRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT---------PYQVDRLAKEFHIYMTQDG----------RISMAG 403 (435)
Q Consensus 343 ~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~~~ll~~~gI~i~pgg----------Ris~~~ 403 (435)
.++++.+.+.|++++ ++.+..|+++||+|+.++ .+++..+++++||.+.||. ||+|+.
T Consensus 420 ~~~r~~l~~~L~~~~---g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~ 496 (517)
T PRK13355 420 YEQRELVYNALNAIP---GISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLP 496 (517)
T ss_pred HHHHHHHHHHHhcCC---CcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCC
Confidence 556789999998873 267889999999997552 3566788888999999871 999965
Q ss_pred CCCCcHHHHHHHHHHHHHhh
Q 013839 404 VTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 404 ~~~e~i~~~~~~l~~~l~~~ 423 (435)
+++++++++++|+++++..
T Consensus 497 -~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 497 -RLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred -CHHHHHHHHHHHHHHHHHh
Confidence 8899999999999998643
No 19
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.6e-47 Score=377.44 Aligned_cols=356 Identities=14% Similarity=0.112 Sum_probs=274.5
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHh-cCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKI-AGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+.++++|++|+| +..+.++| +.+.+++.+. ......+|.+..|.++||+++++++...++..+++++|+ +|+|+
T Consensus 30 ~g~~~~~~~~G~p-~~~~~~~p-~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~--it~G~ 105 (433)
T PRK06855 30 LGVKITWENIGDP-IAKGEKIP-DWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDII--FFNGL 105 (433)
T ss_pred ccccccccccCCC-cccCCCCC-HHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEE--EcCcH
Confidence 4567899999997 32222333 3444444443 233456799999999999999999965545556789999 99999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH-HhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI-WRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAH 205 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~ 205 (435)
++++.++ + .++.+||.|++++|+|+.|... ....|++++.+++.++++|++|+++|++.+... ++++++++++||
T Consensus 106 ~~al~~~--~-~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~i~l~~P~ 181 (433)
T PRK06855 106 GDAIAKI--Y-GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN-PSIAGILLINPD 181 (433)
T ss_pred HHHHHHH--H-HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC-CCceEEEEECCC
Confidence 9999887 4 3678999999999999988754 345688888898843456889999999998632 356888999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEE
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSIL 285 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~ 285 (435)
||||.+++.+++++|+++|++|+++||+||+|.++.|++. ..+++..+.. ..++|+++||||.+++||+|+||+++.
T Consensus 182 NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii~p 258 (433)
T PRK06855 182 NPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK--KTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIEVY 258 (433)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEEEe
Confidence 9999999999999999999999999999999999988641 2334444422 236799999999999999999999731
Q ss_pred ec-ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc
Q 013839 286 CV-DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEH 364 (435)
Q Consensus 286 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 364 (435)
.. ....+..+++.+..... ...+++.+.|.++..++.++. +++++++.++.|+++++.+.+.|+.++ .+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~----~~~~~~~~~~~~~~r~~~~~~~L~~~~---~~~~ 330 (433)
T PRK06855 259 NADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPE----YKNYLKERNKRYEKRSNIAYEKLKDVP---GLKV 330 (433)
T ss_pred CCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCc----HHHHHHHHHHHHHHHHHHHHHHHhcCC---Ceec
Confidence 00 11222334455544333 245678899999999998754 457888999999999999999998763 2567
Q ss_pred cccCcceeEecCCC--------------------------------HHHHHHHhhhccEEEeCCC---------cEEecc
Q 013839 365 ITNQLGMFCFSGLT--------------------------------PYQVDRLAKEFHIYMTQDG---------RISMAG 403 (435)
Q Consensus 365 ~~~~~g~~~~~~~~--------------------------------~~~~~~ll~~~gI~i~pgg---------Ris~~~ 403 (435)
..+++|||+|+.+. .+++..+++++||.+.||. ||||+.
T Consensus 331 ~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~ 410 (433)
T PRK06855 331 NRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE 410 (433)
T ss_pred cCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC
Confidence 78999999999663 1345567788999999982 999987
Q ss_pred CCCCcHHHHHHHHHHHHHh
Q 013839 404 VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 404 ~~~e~i~~~~~~l~~~l~~ 422 (435)
.+++++++++++|++++++
T Consensus 411 ~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 411 RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 7899999999999999875
No 20
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-47 Score=375.91 Aligned_cols=363 Identities=14% Similarity=0.115 Sum_probs=278.9
Q ss_pred HHHHhcCCCCCeeeeecceecCC-CCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCee
Q 013839 41 TEAFLADPSPYKINLGVGAYRDD-KGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSA 119 (435)
Q Consensus 41 ~~~~~~~~~~~~i~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~ 119 (435)
.+.+.++.++++|+|++|+| ++ ..+++|+.+...+.+.+......+|+|..|.++||+++++++....+..+++++|+
T Consensus 23 ~~~~~~~~~~~~i~l~~G~p-~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~ 101 (409)
T PLN00143 23 KENFNEDDHRLAISFGFGDP-SCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVY 101 (409)
T ss_pred HHhcccCCCCceeeCCCCCC-CCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEE
Confidence 33444667899999999997 41 11244444444444444444356699999999999999999965544456689999
Q ss_pred eEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEE
Q 013839 120 GVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFL 199 (435)
Q Consensus 120 ~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v 199 (435)
+|+|+++++.++ +.+++.+||.|++++|+|+.|...++..|++++.+++.+++++.+|++.|++++. ++++++
T Consensus 102 --it~G~~~al~~~--~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~~ 174 (409)
T PLN00143 102 --LTLGCKHAAEII--IKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD---ENTIAM 174 (409)
T ss_pred --EecChHHHHHHH--HHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc---cCCEEE
Confidence 999999999998 7777899999999999999999999999999999988445568899999998886 567899
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcc
Q 013839 200 LHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRV 279 (435)
Q Consensus 200 ~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~Rv 279 (435)
+++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+ +..+++|+++||||.|+++|+|+
T Consensus 175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f~~pGlRv 251 (409)
T PLN00143 175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK--PFVPMGLF-ASIVPVITLGSISKRWMIPGWGL 251 (409)
T ss_pred EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC--CCcchhhh-cccCcEEEEccchhhcCCCccce
Confidence 9999999999999999999999999999999999999999988641 22233333 33468999999999999999999
Q ss_pred cEEEEEecChhHHH--HHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 280 GCLSILCVDSKQAA--AIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 280 G~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
||+++ ..++...+ .++..+.+.... ...++.+.|.++..+|.+.. ..+.++.+++++++++.+.+.|++++
T Consensus 252 G~~v~-~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~~~~ 324 (409)
T PLN00143 252 GWLVT-CDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKTT-----EDFFSKTINILRAALAFCYDKLKEIP 324 (409)
T ss_pred EEEEe-eCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99963 21333111 133444443322 23357899999999987531 25677778888888888888888765
Q ss_pred CCCCccccccCcceeEecCCC----------HHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHHHHH
Q 013839 358 SSLNWEHITNQLGMFCFSGLT----------PYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 358 ~~~~~~~~~~~~g~~~~~~~~----------~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
. ......|++|+|+|+.+. .+++..+++++||.+.||. ||+++. +++++++++++|+++
T Consensus 325 ~--~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l~~al~rl~~~ 401 (409)
T PLN00143 325 C--IMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSLEDGLGRLKSF 401 (409)
T ss_pred C--CCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence 2 111346889999999763 2455677788999999972 999986 789999999999999
Q ss_pred HHhhh
Q 013839 420 TRSEQ 424 (435)
Q Consensus 420 l~~~~ 424 (435)
+++..
T Consensus 402 l~~~~ 406 (409)
T PLN00143 402 CGRHA 406 (409)
T ss_pred HHHhc
Confidence 86543
No 21
>PLN02231 alanine transaminase
Probab=100.00 E-value=3.2e-47 Score=380.36 Aligned_cols=360 Identities=16% Similarity=0.150 Sum_probs=284.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcC--C-CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG--S-EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
..++.|+|+.|.+ ..|...++++...+.. + ...+|+++.|.++||++|++++...++.++++++|+ +|+
T Consensus 127 ~~p~~i~~~~~~~------~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~--iT~ 198 (534)
T PLN02231 127 DHPSLLDKSETHG------LFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIF--LTD 198 (534)
T ss_pred cCCccCCCCCccc------cCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEE--EeC
Confidence 4578899987664 3444777777766653 2 356799999999999999999976666667799999 999
Q ss_pred CchhHHHHHHHHHHHhC-CCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC---CCcEEEE
Q 013839 125 SGTGACRLFAEFQRRFH-PESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP---DSSFFLL 200 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~-~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~---~~~~~v~ 200 (435)
|+++|+.++ +..++. +||.|+++.|+|+.|...+...|++++.|++..+++|++|+++|++.+++.. .++++++
T Consensus 199 Ga~~ai~~~--~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 199 GASPAVHMM--MQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CHHHHHHHH--HHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 999999998 666664 7999999999999999999999999999998544568999999999987421 2578999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhh------cCCeEEEEecccccc-c
Q 013839 201 HPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE------DEHLIGCAQSYAKSM-G 273 (435)
Q Consensus 201 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~s~SK~~-g 273 (435)
++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++. ....++..+.. ...++++++|+||.+ |
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g 355 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYG 355 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCccccc
Confidence 999999999999999999999999999999999999999998531 12334433321 123699999999975 8
Q ss_pred ccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHH
Q 013839 274 LYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDP----NLKSLWIDEVKIMADRIQRKRTTL 349 (435)
Q Consensus 274 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~----~l~~~~~~~~~~~~~~~~~~~~~l 349 (435)
++|+|+||+++...+++ +++.+.+... ...+++...|.++..++..+ ...+.+.++...+++.++++++.+
T Consensus 356 ~pGlRiGy~~~~~~~~~----l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l 430 (534)
T PLN02231 356 ECGKRGGYMEVTGFTSD----VREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTL 430 (534)
T ss_pred CCccceEEEEEecCCHH----HHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999974222677 7777777654 34567788899988888653 223334455667789999999999
Q ss_pred HHHHHhhCCCCCccccccCcceeEecCC--CH---------------HHHHHHhhhccEEEeCCC-----------cEEe
Q 013839 350 RQNLEKLGSSLNWEHITNQLGMFCFSGL--TP---------------YQVDRLAKEFHIYMTQDG-----------RISM 401 (435)
Q Consensus 350 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~---------------~~~~~ll~~~gI~i~pgg-----------Ris~ 401 (435)
.+.|+++. ++.+.+++||||+|+.+ .. .++..++++.||.++||. |+++
T Consensus 431 ~~~L~~~~---gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~ 507 (534)
T PLN02231 431 EDALNSLE---GVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTI 507 (534)
T ss_pred HHHHhcCC---CceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEe
Confidence 99999873 26788999999999544 21 134667888999999972 8999
Q ss_pred ccCCCCcHHHHHHHHHHHHHhhhhhh
Q 013839 402 AGVTTGNVNYLANAIHEVTRSEQETA 427 (435)
Q Consensus 402 ~~~~~e~i~~~~~~l~~~l~~~~~~~ 427 (435)
.. +++++++++++|++++++..++.
T Consensus 508 ~~-~~e~l~eal~RL~~~~~~~~~~~ 532 (534)
T PLN02231 508 LP-QEDKIPAIVSRLTEFHKSFMDEF 532 (534)
T ss_pred CC-CHHHHHHHHHHHHHHHHHHHHHh
Confidence 65 88999999999999988766553
No 22
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.4e-47 Score=374.23 Aligned_cols=340 Identities=15% Similarity=0.131 Sum_probs=268.4
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg 126 (435)
.+++.|+|+.|+| +. +.++...+.+...+.......|+|..|.++||+++++++....+.+++++ +|+ +|.|+
T Consensus 30 ~~~~~i~l~~~~p-~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~--it~G~ 103 (389)
T PRK08068 30 EGHDVINLGQGNP-DQ---PTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVA--ILFGG 103 (389)
T ss_pred cCCCeEEecCCCC-CC---CCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEE--EcCCc
Confidence 3467899999986 32 33333333333333333356799999999999999999843333334466 788 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN 206 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N 206 (435)
++++.++ +.+++.+||+|++++|+|..|...++..|++++.+|+.+++++.+|++++++.+. .+++++++++|||
T Consensus 104 ~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~N 178 (389)
T PRK08068 104 KAGLVEL--PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA---EKAKLMYLNYPNN 178 (389)
T ss_pred HHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc---ccceEEEEECCCC
Confidence 9999887 7777899999999999999999999999999999998434467889999998886 5688999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
|||.+++.+++++|+++|++|+++||+||+|.++.+++. ...+.....+..+++++++||||.||++|+|+||+++
T Consensus 179 PTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-- 254 (389)
T PRK08068 179 PTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ--KPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-- 254 (389)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC--CCcChhhCCCccCCEEEEecchhccCCccceeEeEec--
Confidence 999999999999999999999999999999998887531 1223222233456889999999999999999999964
Q ss_pred cChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
+++ +++.+.+.......+.+.+.|.++..++.+.. ++++..+++++++++.+.+.|+++| +.+.+
T Consensus 255 -~~~----l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~r~~~~~~L~~~g----~~~~~ 319 (389)
T PRK08068 255 -NES----VIEAINLLQDHLFVSLFGAIQDAAIEALLSDQ------SCVAELVARYESRRNAFISACREIG----WEVDA 319 (389)
T ss_pred -CHH----HHHHHHHHHhhccCCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHHCC----CcccC
Confidence 888 88888877665556666777888888876543 6788899999999999999999886 45778
Q ss_pred cCcceeEecCC----CHH-HHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHH
Q 013839 367 NQLGMFCFSGL----TPY-QVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHE 418 (435)
Q Consensus 367 ~~~g~~~~~~~----~~~-~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~ 418 (435)
+++|+|+|+.+ +.+ +.+.+++++||.+.||. ||+++. +++.+..++++|++
T Consensus 320 ~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~ 385 (389)
T PRK08068 320 PKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGK 385 (389)
T ss_pred CCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHH
Confidence 89999999865 333 44666656799999861 999975 66777777777765
No 23
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=3.6e-47 Score=372.96 Aligned_cols=364 Identities=14% Similarity=0.083 Sum_probs=285.5
Q ss_pred CchhhHHHHH-hcCCCCCeeeeecceecCC-CCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcc
Q 013839 35 DPINGVTEAF-LADPSPYKINLGVGAYRDD-KGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDV 112 (435)
Q Consensus 35 ~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 112 (435)
+.+..++++. .+..++++|+|++|+| +. ..++++....+++.+.+......+|.+..|.+++|+++++++....+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~G~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~ 93 (409)
T PLN02656 15 GILSLLMESIDDEENGKRVISLGMGDP-TAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYK 93 (409)
T ss_pred hHHHHHHHhccccccCCeeeecCCCCC-CcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 3444555554 2345689999999997 31 1124444444444444544445679999999999999999996544445
Q ss_pred ccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC
Q 013839 113 VKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA 192 (435)
Q Consensus 113 ~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~ 192 (435)
+++++|+ +|+|+++++.++ +.+++.+||+|++++|+|+.+....+..|++++.+++.+++++.+|++.+++.+.
T Consensus 94 ~~~~~i~--~t~G~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-- 167 (409)
T PLN02656 94 LSLDDVF--ITSGCTQAIDVA--LSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD-- 167 (409)
T ss_pred CCcccEE--EeCChHHHHHHH--HHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc--
Confidence 6688998 999999999888 6667899999999999999998888889999999998434568899999999886
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc
Q 013839 193 PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 193 ~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 272 (435)
++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+ +...++|+++||||.|
T Consensus 168 -~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f 243 (409)
T PLN02656 168 -QNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVF-GSIVPVLTLGSLSKRW 243 (409)
T ss_pred -cCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHh-cccCcEEEEcccchhc
Confidence 5688999999999999999999999999999999999999999999988642 22333333 3346899999999999
Q ss_pred cccCCcccEEEEEec------ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCV------DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKR 346 (435)
Q Consensus 273 g~~G~RvG~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 346 (435)
+++|+|+||+++ .+ +++ +++.+.+.... ..+++.+.|.++..+|.+.. +.++++.++++++++
T Consensus 244 ~~pGlRiG~~i~-~~~~~~~~~~~----~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~r 312 (409)
T PLN02656 244 IVPGWRLGWFVT-TDPSGSFRDPK----IVERIKKYFDI-LGGPATFIQAAVPTILEQTD-----ESFFKKTINILKQSS 312 (409)
T ss_pred cCcceeEEEEEE-eCcccccccHH----HHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHH
Confidence 999999999973 11 235 77777765443 45678999999999997532 267888899999999
Q ss_pred HHHHHHHHhhCCCCCccccccCcceeEecCCC---------H-HHHHHHhhhccEEEeCCC--------cEEeccCCCCc
Q 013839 347 TTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT---------P-YQVDRLAKEFHIYMTQDG--------RISMAGVTTGN 408 (435)
Q Consensus 347 ~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~---------~-~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~ 408 (435)
+.+.+.|+.++. ......|++|+|+|+.++ . +++.++++++||.+.||. ||+++. ++++
T Consensus 313 ~~~~~~L~~~~~--~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~ 389 (409)
T PLN02656 313 DICCDRIKEIPC--ITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSS 389 (409)
T ss_pred HHHHHHHhhCCC--CcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHH
Confidence 999999988742 112357899999998652 2 356677788999999982 999986 8899
Q ss_pred HHHHHHHHHHHHHhh
Q 013839 409 VNYLANAIHEVTRSE 423 (435)
Q Consensus 409 i~~~~~~l~~~l~~~ 423 (435)
+++++++|++++...
T Consensus 390 l~eal~rl~~~~~~~ 404 (409)
T PLN02656 390 LEEALGRIKSFYLRH 404 (409)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988643
No 24
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=4.2e-47 Score=371.76 Aligned_cols=342 Identities=14% Similarity=0.111 Sum_probs=271.6
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcc-ccCC-CeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDV-VKEG-RSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~-~v~~~~t~ 124 (435)
..++++|+|+.|+| +. +++ +.+.+++.+.... ..+|++..|.++||+++++++...++.+ ++++ +|+ +|+
T Consensus 26 ~~~~~~i~l~~~~p-~~---~~~-~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~--it~ 97 (396)
T PRK09147 26 PADLPPISLSIGEP-KH---PTP-AFIKDALAANLDG-LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVL--PVN 97 (396)
T ss_pred ccCCCeEecCCCCC-CC---CCC-HHHHHHHHHHhhh-hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEE--ECC
Confidence 34689999999996 32 223 4444444443333 5779999999999999999985433333 4464 888 899
Q ss_pred CchhHHHHHHHHHHHhCC---CCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEe
Q 013839 125 SGTGACRLFAEFQRRFHP---ESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLH 201 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~---gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~ 201 (435)
|+++++.++ +.+++++ ||.|++++|+|..+...++..|++++.+|+.++++|++|++.+++.+. ++++++++
T Consensus 98 G~~~al~~~--~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~---~~~k~i~l 172 (396)
T PRK09147 98 GSREALFAF--AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW---ARTQLLFV 172 (396)
T ss_pred ChHHHHHHH--HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh---hccEEEEE
Confidence 999999888 7777889 899999999999999999999999999998544568999999998876 57899999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhh----hcCCeEEEEecccccccccCC
Q 013839 202 PSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFL----EDEHLIGCAQSYAKSMGLYGH 277 (435)
Q Consensus 202 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~s~SK~~g~~G~ 277 (435)
+|||||||.+++.+++++|+++|++|+++||+||+|.++.+++.......+.... +..+++|+++||||.++++|+
T Consensus 173 ~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~Gl 252 (396)
T PRK09147 173 CSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGL 252 (396)
T ss_pred cCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccc
Confidence 9999999999999999999999999999999999999998764111111121111 124689999999999999999
Q ss_pred cccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 278 RVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 278 RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
|+||+++ +++ +++.+.+.......+++.+.|.++...+... +++++.++.++++++.+.+.|+..
T Consensus 253 RiG~~~~---~~~----l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~L~~~- 317 (396)
T PRK09147 253 RSGFVAG---DAA----LLKKFLLYRTYHGCAMPPAVQAASIAAWNDE-------AHVRENRALYREKFDAVTPILAPV- 317 (396)
T ss_pred eeeeecC---CHH----HHHHHHHHhhhcccCCCHHHHHHHHHHhcch-------hHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 9999964 788 7777777665455678888998887777543 678888999999999999999874
Q ss_pred CCCCccccccCcceeEecCCC---HHHHHHHhhhccEEEeCC--------------C--cEEeccCCCCcHHHHHHHHHH
Q 013839 358 SSLNWEHITNQLGMFCFSGLT---PYQVDRLAKEFHIYMTQD--------------G--RISMAGVTTGNVNYLANAIHE 418 (435)
Q Consensus 358 ~~~~~~~~~~~~g~~~~~~~~---~~~~~~ll~~~gI~i~pg--------------g--Ris~~~~~~e~i~~~~~~l~~ 418 (435)
+.+..+++|+|+|+.+. .+++..+++++||.+.|| + ||+++. +++++++++++|++
T Consensus 318 ----~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l~rl~~ 392 (396)
T PRK09147 318 ----LDVQLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAAERIVD 392 (396)
T ss_pred ----cCCCCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 23567899999999862 445577777789999875 1 999987 78889999999988
Q ss_pred HHH
Q 013839 419 VTR 421 (435)
Q Consensus 419 ~l~ 421 (435)
+++
T Consensus 393 ~~~ 395 (396)
T PRK09147 393 FCR 395 (396)
T ss_pred Hhc
Confidence 763
No 25
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=2e-47 Score=372.03 Aligned_cols=341 Identities=13% Similarity=0.136 Sum_probs=275.9
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCchh
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSGTG 128 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg~~ 128 (435)
++.|+|+.|+| +. +.+....+.+.+.+... ..+|++..|.+++|+++++++....+..+.++ +|. +|+|+++
T Consensus 20 ~~~i~l~~~~~-~~---~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~--~t~G~~~ 92 (378)
T PRK07682 20 EGVISLGVGEP-DF---VTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEII--VTVGASQ 92 (378)
T ss_pred CCeEEeCCCCC-CC---CCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEE--EeCChHH
Confidence 57899999996 32 22323333333333333 56699999999999999999953322333454 788 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT 208 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt 208 (435)
|+.++ +.+++++||+|++++|+|+.+...++..|.+++.++...++++++|++++++++. ++++++++++|||||
T Consensus 93 al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPt 167 (378)
T PRK07682 93 ALDVA--MRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT---AKTKAILLCSPNNPT 167 (378)
T ss_pred HHHHH--HHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC---cccEEEEEECCCCCc
Confidence 99988 6777899999999999999999999999999999987433468999999999886 568899999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecC
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVD 288 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~ 288 (435)
|.+++.+++++|+++|++|++++|+||+|.++.+++. ..++..+.+..+++++++||||.|+++|+|+||+++ +
T Consensus 168 G~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~---~ 241 (378)
T PRK07682 168 GAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA---YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA---P 241 (378)
T ss_pred CcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC---CCChhhcccccCCEEEEecCcccccChhhhhhhhhc---C
Confidence 9999999999999999999999999999999998641 223334444457899999999999999999999974 8
Q ss_pred hhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC
Q 013839 289 SKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ 368 (435)
Q Consensus 289 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 368 (435)
++ +++.+.+.......+++.+.|.++..+|.+.. .++++.++.++++++.+.+.|++++ +.+..++
T Consensus 242 ~~----~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~p~ 307 (378)
T PRK07682 242 VY----FSEAMLKIHQYSMMCAPTMAQFAALEALRAGN------DDVIRMRDSYRKRRNFFVTSFNEIG----LTCHVPG 307 (378)
T ss_pred HH----HHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHHHCC----CccCCCC
Confidence 88 88888776665566788999999999997653 5578889999999999999999886 4577889
Q ss_pred cceeEecCC-----CH-HHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 369 LGMFCFSGL-----TP-YQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 369 ~g~~~~~~~-----~~-~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
+|+|+|+.+ +. ++...+++++||.+.||. |||++. +++++++++++|++++++.
T Consensus 308 g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 308 GAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred eeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 999999843 33 355677767899999861 999987 7899999999999988653
No 26
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=3.8e-47 Score=372.39 Aligned_cols=347 Identities=14% Similarity=0.154 Sum_probs=275.9
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg 126 (435)
.+++.|+|+.|+| +. +.+...++.+.+.+......+|+++.|.++||+++++++....+..+.++ +|+ +|+|+
T Consensus 28 ~~~~~i~l~~~~p-~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~--it~G~ 101 (405)
T PRK09148 28 AGADIIDLGMGNP-DL---PTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVV--ATLGS 101 (405)
T ss_pred cCCCeEEcCCCCC-CC---CCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEE--EcCCh
Confidence 4578899999996 32 33444555544444333456799999999999999999943322334466 788 99999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN 206 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N 206 (435)
++++.++ +..++.+||+|++++|+|+.+...++..|++++.+++.++.++ ++++++.+....++++++++++|||
T Consensus 102 ~~al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~---~~~l~~~~~~~~~~~~~v~l~~P~N 176 (405)
T PRK09148 102 KEGFANM--AQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF---FPALERAVRHSIPKPIALIVNYPSN 176 (405)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC---ccCHHHHHhhccccceEEEEeCCCC
Confidence 9999998 6777899999999999999999999999999999998433223 4555555543335789999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
|||.+++.+++++|+++|++|+++||+||+|.++.+++ ...+++..+....+++++++||||.+|+||+|+||+++
T Consensus 177 PtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~--~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-- 252 (405)
T PRK09148 177 PTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDG--NPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-- 252 (405)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCC--CCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC--
Confidence 99999999999999999999999999999999988753 12223433433346789999999999999999999974
Q ss_pred cChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
+++ +++.+.+.+.....+++.+.|.++..+|.+.. ++++..++.++++++.+.+.|+.++ +.+..
T Consensus 253 -~~~----~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~------~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~ 317 (405)
T PRK09148 253 -NER----LIAALTRVKSYLDYGAFTPIQVAATAALNGPQ------DCIAEMRELYKKRRDVLVESFGRAG----WDIPP 317 (405)
T ss_pred -CHH----HHHHHHHHHHHhccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHHcC----CccCC
Confidence 888 88888887766666788899999999997643 6788899999999999999999876 45667
Q ss_pred cCcceeEecCCC--------HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHhhhh
Q 013839 367 NQLGMFCFSGLT--------PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 367 ~~~g~~~~~~~~--------~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
+++|+|+|+.+. .++...+++++||.+.||. ||+++. +.+++.+++++|.+++++..+
T Consensus 318 p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~-~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 318 PAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVE-NEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred CCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHHHH
Confidence 899999999652 3455677777999999971 999974 889999999999999976654
No 27
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=2.2e-47 Score=371.82 Aligned_cols=355 Identities=14% Similarity=0.131 Sum_probs=278.9
Q ss_pred ccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHH-hcCCCCCCCCCCcccHHHHHHHHHh
Q 013839 26 WDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAK-IAGSEFLESISASVSTKMVEESVKL 104 (435)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~~~g~~~lr~~ia~~ 104 (435)
.++++..+.. ++..+.+.. ..++.|+|+.|.| +. +++ +.+.+++.+ +..+ ..+|+|+.|.++||++++++
T Consensus 8 ~~~~~~~~~~-~~~~~~~~~--~~~~~i~l~~g~p-~~---~~~-~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~ 78 (384)
T PRK12414 8 RSKLPDVGTT-IFTVIGQLA--AQHDALNLSQGAP-NF---APD-PALVEGVARAMRDG-HNQYAPMAGIAALREALAEK 78 (384)
T ss_pred HHhcccCCcc-HHHHHHHHH--HhCCeEEcCCCCC-CC---CCC-HHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHH
Confidence 4445555543 444444433 3467999999996 32 333 333444443 3333 46799999999999999999
Q ss_pred HcCCCCccccC-CCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChH
Q 013839 105 VYGKDSDVVKE-GRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFA 183 (435)
Q Consensus 105 l~~~~~~~~~~-~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e 183 (435)
+....+...++ +++. +|+|+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+++ +++++.+|++
T Consensus 79 l~~~~g~~~~~~~~i~--it~g~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~ 153 (384)
T PRK12414 79 TERLYGARYDPASEVT--VIASASEGLYAA--ISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKL-SPEDFRVNWD 153 (384)
T ss_pred HHHHhCCCCCCCCcEE--EECChHHHHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEec-CccccccCHH
Confidence 73322222223 5788 899999999888 6777899999999999999999999999999999998 3456789999
Q ss_pred hHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 184 ALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 184 ~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
.+++.+. ++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+.+..+++|
T Consensus 154 ~l~~~l~---~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~~~~~~~~~i 228 (384)
T PRK12414 154 EVAAAIT---PRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA--RHHSMARHRELAERSV 228 (384)
T ss_pred HHHhhcC---cccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC--CccCcccCcCccCcEE
Confidence 9999887 5788999999999999999999999999999999999999999999888642 2223333333456899
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
+++||||.||++|+|+||+++ +++ +++.+.+.......+++.+.|.++..+|.++. +..+.++.++
T Consensus 229 ~~~SfSK~~~~pGlRiG~~v~---~~~----l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~-------~~~~~~~~~~ 294 (384)
T PRK12414 229 IVSSFGKSYHVTGWRVGYCLA---PAE----LMDEIRKVHQFMVFSADTPMQHAFAEALAEPA-------SYLGLGAFYQ 294 (384)
T ss_pred EEecccccccCccceEEEEec---CHH----HHHHHHHHHhheecCCCcHHHHHHHHHhcCCh-------HHHHHHHHHH
Confidence 999999999999999999974 788 88888887766667889999999999998753 2335678899
Q ss_pred HHHHHHHHHHHhhCCCCCccccccCcceeEecCC-------CHHHHHHHhhhccEEEeCCC------------cEEeccC
Q 013839 344 RKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL-------TPYQVDRLAKEFHIYMTQDG------------RISMAGV 404 (435)
Q Consensus 344 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~ll~~~gI~i~pgg------------Ris~~~~ 404 (435)
++++.+.+.|++.+ +.+.++++|||+|+.+ +.+++..+++++||.+.||. ||+++.
T Consensus 295 ~~r~~l~~~L~~~g----~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~- 369 (384)
T PRK12414 295 RKRDLLARELAGSR----FELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK- 369 (384)
T ss_pred HHHHHHHHHHHhCC----CeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-
Confidence 99999999999876 5677889999999743 34566677788999999861 999987
Q ss_pred CCCcHHHHHHHHHH
Q 013839 405 TTGNVNYLANAIHE 418 (435)
Q Consensus 405 ~~e~i~~~~~~l~~ 418 (435)
+++++++++++|++
T Consensus 370 ~~~~~~~~~~rl~~ 383 (384)
T PRK12414 370 DDATLVEGARRLCS 383 (384)
T ss_pred CHHHHHHHHHHHhh
Confidence 78889999998865
No 28
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-47 Score=371.04 Aligned_cols=340 Identities=14% Similarity=0.135 Sum_probs=270.9
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg 126 (435)
.+++.|+|+.|+| +. +.+...++.+...+.......|+++.|.++||+++++++....+.+++++ +++ +|+|+
T Consensus 33 ~g~~~i~l~~g~p-~~---~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~--vt~G~ 106 (394)
T PRK05942 33 QGLDLIDLGMGNP-DG---AAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEAL--PLLGS 106 (394)
T ss_pred cCCCeEEcCCCCC-CC---CCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEE--EccCh
Confidence 4567999999986 32 33445666666665444356799999999999999999853323334466 477 79999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN 206 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N 206 (435)
++++.++ +.+++.+||+|++++|+|+.+...+...|++++.+++..+++|++|++++++.+. ++++++++++|||
T Consensus 107 ~~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~P~N 181 (394)
T PRK05942 107 KEGLTHL--ALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA---QQAKILYFNYPSN 181 (394)
T ss_pred HHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc---ccceEEEEcCCCC
Confidence 9999988 6677899999999999999999888999999999998434467899999999886 6789999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
|||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+.+..+++++++||||.||++|+|+||+++
T Consensus 182 PtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-- 257 (394)
T PRK05942 182 PTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY--QPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-- 257 (394)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCCChhhCCCccccEEEEecchhccCChhhheeeeec--
Confidence 999999999999999999999999999999999987542 2233433433345789999999999999999999974
Q ss_pred cChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
+++ +++.++........+.+.++|.++..+|... .+++++.+++++++++.+.+.|+..+ +.+..
T Consensus 258 -~~~----l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~ 322 (394)
T PRK05942 258 -NRH----IIQGLRTLKTNLDYGIFSALQKAAETALQLP------DSYLQQVQERYRTRRDFLIQGLGELG----WNIPP 322 (394)
T ss_pred -CHH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHHHCC----CeecC
Confidence 888 8888887666555678889999999998753 26788899999999999999998876 45677
Q ss_pred cCcceeEecCC----C-HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHH
Q 013839 367 NQLGMFCFSGL----T-PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHE 418 (435)
Q Consensus 367 ~~~g~~~~~~~----~-~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~ 418 (435)
+++|+|+|+.+ + .+++.++++++||.+.||. |++++. +.+.+.+++++|++
T Consensus 323 ~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~ 388 (394)
T PRK05942 323 TKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQ 388 (394)
T ss_pred CCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 89999999865 2 3455667788999998861 999964 55556666665543
No 29
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=5.2e-47 Score=369.81 Aligned_cols=340 Identities=16% Similarity=0.126 Sum_probs=270.8
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg 126 (435)
.++++++|+.|+| +. ..++...+.+...+.......|+++.|.++||+++++++....+.+.+++ +|+ +|+|+
T Consensus 27 ~~~~~~~l~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi--~t~G~ 100 (383)
T TIGR03540 27 EGVDVISLGIGDP-DL---PTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVL--SLIGS 100 (383)
T ss_pred cCCCeEEeCCCCC-CC---CCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEE--ECCCc
Confidence 4678999999996 32 33333333333333333356799999999999999999853333333354 577 78999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN 206 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N 206 (435)
++++.++ +..++.+||+|++++|+|+.+...++..|++++.+|+.+++++.+|++++++.+. ++++++++++|||
T Consensus 101 ~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~i~~P~N 175 (383)
T TIGR03540 101 KEGIAHI--PLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA---KKAKLMFINYPNN 175 (383)
T ss_pred HHHHHHH--HHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc---ccceEEEEeCCCC
Confidence 9999998 6777899999999999999999999999999999998434457789999998886 5789999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
|||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+++
T Consensus 176 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-- 251 (383)
T TIGR03540 176 PTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY--KAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-- 251 (383)
T ss_pred CcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC--CCcCcccCCCcccCEEEEEecccccCCccceeeEEeC--
Confidence 999999999999999999999999999999999887541 2233333322346789999999999999999999964
Q ss_pred cChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
+++ +++.+.........+++.+.|.++..++.+.. +++++.++.++++++.+.+.|++.+ +.+..
T Consensus 252 -~~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~ 316 (383)
T TIGR03540 252 -NAD----LIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQ------DVVKEIRKIYQRRRDLLLEALKKIG----IDVEK 316 (383)
T ss_pred -CHH----HHHHHHHHHHhcccCCChHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHhCC----CEecC
Confidence 888 77777776655556778889999999997653 7778889999999999999999886 56778
Q ss_pred cCcceeEecCC----C-HHHHHHHhhhccEEEeCC--------C--cEEeccCCCCcHHHHHHHHHH
Q 013839 367 NQLGMFCFSGL----T-PYQVDRLAKEFHIYMTQD--------G--RISMAGVTTGNVNYLANAIHE 418 (435)
Q Consensus 367 ~~~g~~~~~~~----~-~~~~~~ll~~~gI~i~pg--------g--Ris~~~~~~e~i~~~~~~l~~ 418 (435)
+++|+|+|+.+ + .+++..+++++||.+.|| + ||+++. +++++.+++++|++
T Consensus 317 ~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 317 PKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK 382 (383)
T ss_pred CCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence 88999999865 2 345577777789999987 1 999975 77778888877754
No 30
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4e-47 Score=370.83 Aligned_cols=339 Identities=16% Similarity=0.118 Sum_probs=269.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHH-hcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAK-IAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~g 125 (435)
.++++++|+.|+| +. .+++ .+.+++.. +.......|++..|.++||+++++++....+..++++ +|+ +|+|
T Consensus 29 ~~~~~i~l~~~~~-~~---~~~~-~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii--~t~G 101 (385)
T PRK09276 29 RGVDVISLGIGDP-DL---PTPD-HIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVI--SLIG 101 (385)
T ss_pred cCCCEEEecCCCC-CC---CCCH-HHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEE--EccC
Confidence 5578999999996 32 2333 33434433 3333346799999999999999999953323333455 577 7899
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAH 205 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~ 205 (435)
+++++.++ +..++.+||+|++++|+|+.|...++..|++++.+++.+++++.+|++++++.+. ++++++++++||
T Consensus 102 ~~~~i~~~--~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~ 176 (385)
T PRK09276 102 SKEGIAHI--PLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINYPN 176 (385)
T ss_pred cHHHHHHH--HHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCC
Confidence 99999988 6667899999999999999999999999999999998434457789999988876 578999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEE
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSIL 285 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~ 285 (435)
||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+....+++|+++||||.||++|+|+||+++
T Consensus 177 NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~- 253 (385)
T PRK09276 177 NPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGY--KPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG- 253 (385)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCC--CCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC-
Confidence 9999999999999999999999999999999999887531 2233433433346789999999999999999999974
Q ss_pred ecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc
Q 013839 286 CVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI 365 (435)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 365 (435)
+++ +++.+.+.......+.+.+.|.++..++.+. ..++++.+++++++++.+.+.|++.+ +.+.
T Consensus 254 --~~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~ 317 (385)
T PRK09276 254 --NAD----LIAGLGKVKSNVDSGVFQAIQEAGIAALNGP------QEVVEELRKIYQERRDILVEGLRKLG----LEVE 317 (385)
T ss_pred --CHH----HHHHHHHHHhhccCCCCHHHHHHHHHHHcCc------HHHHHHHHHHHHHHHHHHHHHHHhCC----Cccc
Confidence 888 7787877665555667778899998998753 26778889999999999999999875 4567
Q ss_pred ccCcceeEecCC----CH-HHHHHHhhhccEEEeCC--------C--cEEeccCCCCcHHHHHHHHHH
Q 013839 366 TNQLGMFCFSGL----TP-YQVDRLAKEFHIYMTQD--------G--RISMAGVTTGNVNYLANAIHE 418 (435)
Q Consensus 366 ~~~~g~~~~~~~----~~-~~~~~ll~~~gI~i~pg--------g--Ris~~~~~~e~i~~~~~~l~~ 418 (435)
.+++|+|+|+.+ +. +++..+++++||.+.|| + ||+++. +++++.+++++|++
T Consensus 318 ~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 318 PPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK 384 (385)
T ss_pred CCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence 788999999975 33 44577777789999997 1 999975 77888888888764
No 31
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-47 Score=371.52 Aligned_cols=345 Identities=12% Similarity=0.103 Sum_probs=280.4
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
.++++++|+.|.| +. +. ++.+.+++..........|+++.|.++||+++++++....+..+.+++|+ +|+|++
T Consensus 31 ~~~~~i~l~~g~p-~~---~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~--~t~G~~ 103 (402)
T PRK06107 31 AGRSIVDLTVGEP-DF---DT-PDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEIT--VGGGAK 103 (402)
T ss_pred ccCCEEEcCCCCC-CC---CC-CHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEE--EeCCHH
Confidence 4578999999996 32 22 33344444444322246699999999999999999843333344578998 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+|+.++ +..++++||+|++++|+|..|...+...+.+++.+++..++++.+|++.+++.+. ++++++++++|+||
T Consensus 104 ~al~~~--~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NP 178 (402)
T PRK06107 104 QAIFLA--LMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT---PRTRWLILNAPSNP 178 (402)
T ss_pred HHHHHH--HHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC---cCceEEEEECCCCC
Confidence 999988 6667889999999999999999888888888888887334457899999999886 57888999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc-CceeeeeccCCCccCCCCcccHHHHHHh-hhcCCeEEEEecccccccccCCcccEEEEE
Q 013839 208 TGVDPTEEQWREISYQFKVK-GHFPFFDMAYQGFASGDLDKDAQAIRIF-LEDEHLIGCAQSYAKSMGLYGHRVGCLSIL 285 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~-~~~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~ 285 (435)
||.+++.+++++|+++|++| ++++|+||+|.++.+++. ..+++... .+..+++++++||||.|+++|+|+||+++
T Consensus 179 tG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~- 255 (402)
T PRK06107 179 TGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE--PTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG- 255 (402)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC--CCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec-
Confidence 99999999999999999998 999999999999887542 22333333 23356899999999999999999999974
Q ss_pred ecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc
Q 013839 286 CVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI 365 (435)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 365 (435)
+++ +++.+.........+++.++|.++..+|.... .+++..++.++++++.+.+.|++++. +.+.
T Consensus 256 --~~~----~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~~~~g---~~~~ 320 (402)
T PRK06107 256 --PAD----LIAAINKLQSQSSSCPSSISQAAAAAALNGDQ------SFVTESVAVYKQRRDYALALLNAIPG---LSCL 320 (402)
T ss_pred --CHH----HHHHHHHHHHhcccCCChHHHHHHHHHhcCCh------HHHHHHHHHHHHHHHHHHHHHhcCCC---Cccc
Confidence 888 88888887776677899999999999997543 67888899999999999999988632 5677
Q ss_pred ccCcceeEecCC---------------C-HHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 366 TNQLGMFCFSGL---------------T-PYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 366 ~~~~g~~~~~~~---------------~-~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
++++|+|+|+.+ + .+++..+++++||.+.||. ||+|+. +++++++++++|+++++
T Consensus 321 ~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~l~~~l~ 399 (402)
T PRK06107 321 VPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEEACARIERAVA 399 (402)
T ss_pred CCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHH
Confidence 899999999864 2 2456778888999999982 999987 88999999999999886
Q ss_pred hh
Q 013839 422 SE 423 (435)
Q Consensus 422 ~~ 423 (435)
++
T Consensus 400 ~~ 401 (402)
T PRK06107 400 AL 401 (402)
T ss_pred hc
Confidence 54
No 32
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3.7e-47 Score=368.41 Aligned_cols=334 Identities=15% Similarity=0.086 Sum_probs=277.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
.+.++++|+.|+| ++ +.+... .++..++... ..+|++..|.++||++|++++.+. ++++|+ +|+|++
T Consensus 24 ~~~~~~~~~~~e~-~~---~~~~~~-~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~-----~~~~vi--~t~G~~ 90 (373)
T PRK07324 24 AESCIDSLTLEEL-LA---LAGKNP-EAFYQELGQK-KLTYGWIEGSPEFKEAVASLYQNV-----KPENIL--QTNGAT 90 (373)
T ss_pred ccCCCCCCcHHHH-Hh---ccCcch-HHHHHHHhcC-CccCCCCCCCHHHHHHHHHHhcCC-----ChhhEE--EcCChH
Confidence 5679999999997 54 344444 4455555444 567999999999999999998532 267888 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+|+.++ +.+++.+||+|+++.|+|..+...++..|++++.+++..++++.+|++++++.+. ++++++++++||||
T Consensus 91 ~al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~~~kli~i~~p~NP 165 (373)
T PRK07324 91 GANFLV--LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR---PNTKLICINNANNP 165 (373)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC---CCCcEEEEeCCCCC
Confidence 999988 7777899999999999999999999999999999998544567899999998886 67899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|++||+++|+||+|.++.+++ ..+++ .+..+++|+++||||.+|++|+|+||+++
T Consensus 166 tG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s~---~~~~~~~I~~~s~SK~~~~~G~RiG~i~~--- 236 (373)
T PRK07324 166 TGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPSI---ADLYEKGISTNSMSKTYSLPGIRVGWIAA--- 236 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCCh---hhccCCEEEEecchhhcCCccceeEEEec---
Confidence 9999999999999999999999999999999988753 12222 23346789999999999999999999964
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+++.+.....+++.++|.++..+|.+. +.+++..++.++++++.+.+.|++.+ .+.+..|
T Consensus 237 ~~~----li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~------~~~l~~~~~~~~~~~~~l~~~l~~~~---~~~~~~p 303 (373)
T PRK07324 237 NEE----VIDILRKYRDYTMICAGVFDDMLASLALEHR------DAILERNRKIVRTNLAILDEWVAKEP---RVSYVKP 303 (373)
T ss_pred CHH----HHHHHHHHhCcEEecCChHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHhcCC---CceEECC
Confidence 888 8888988877667788899999998888754 36788889999999999999998764 2566778
Q ss_pred CcceeEecCC----C-HHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 368 QLGMFCFSGL----T-PYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 368 ~~g~~~~~~~----~-~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
++|+|.|+.+ + .+++.++++++||.+.||. ||+++. +++.+.+++++|++++++
T Consensus 304 ~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 304 KAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLRE 370 (373)
T ss_pred CceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 8888777744 3 4566888888999999983 999987 788999999999998864
No 33
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-46 Score=367.23 Aligned_cols=341 Identities=16% Similarity=0.115 Sum_probs=275.1
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCch
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSGT 127 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg~ 127 (435)
.+.+|+|+.|.| +. +.|+..++.+...+..+ ..+|++..|.++||+++++++....+..++++ +|+ +|+|++
T Consensus 25 ~~~~i~l~~g~p-~~---~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~--~t~G~~ 97 (387)
T PRK08912 25 EHGAINLGQGFP-DD---PGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVM--VTSGAT 97 (387)
T ss_pred hCCeEEccCCCC-CC---CCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEE--EeCCcH
Confidence 367999999997 33 34555666555555444 46799999999999999999843333334566 888 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++.++ +..++.+||+|++++|+|+.+...++..|++++.+++ +++++++|++++++.+. ++++++++++||||
T Consensus 98 ~al~~~--~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NP 171 (387)
T PRK08912 98 EALAAA--LLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRL-EPPHWRLPRAALAAAFS---PRTKAVLLNNPLNP 171 (387)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccCcCCHHHHHHHhC---ccceEEEEeCCCCC
Confidence 999887 6777889999999999999999999999999999988 34568999999999886 57789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++....+..+++++++|+||.||++|+|+||+++
T Consensus 172 tG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~--- 246 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR--RHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCA--- 246 (387)
T ss_pred cCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC--CCcChhhCCCccCceEEEeechhhccCcCceeEEEec---
Confidence 99999999999999999999999999999999887641 2223333333356899999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+.......+.+...|.++..++.... ++.++.+++++++++.+.+.|+.+| +.+.++
T Consensus 247 ~~~----~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~ 312 (387)
T PRK08912 247 APP----LLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPD------DYFEGMRADLARSRDRLAAGLRRIG----FPVLPS 312 (387)
T ss_pred CHH----HHHHHHHHHhhccccCChHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHhCC----CcccCC
Confidence 778 77777776655445667777888888775432 6677889999999999999999886 457778
Q ss_pred CcceeEecCCC-------H-HHHHHHhhhccEEEeCCC------------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 368 QLGMFCFSGLT-------P-YQVDRLAKEFHIYMTQDG------------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 368 ~~g~~~~~~~~-------~-~~~~~ll~~~gI~i~pgg------------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
++|+|+|+.+. . +++..+++++||.+.||. ||+++. +++++++++++|++++++
T Consensus 313 ~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 313 QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR 386 (387)
T ss_pred CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 89999998652 2 345666777899999861 999987 788899999999987753
No 34
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.4e-46 Score=368.61 Aligned_cols=365 Identities=14% Similarity=0.119 Sum_probs=282.2
Q ss_pred CchhhHHHHHhcC--CCCCeeeeecceecCCCCCcccchHHHHHHHH-hcCCCCCCCCCCcccHHHHHHHHHhHcCCCCc
Q 013839 35 DPINGVTEAFLAD--PSPYKINLGVGAYRDDKGRPVVLQCVREAEAK-IAGSEFLESISASVSTKMVEESVKLVYGKDSD 111 (435)
Q Consensus 35 ~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~ 111 (435)
+++.+..+..+.+ +++++|+|+.|.|..++..+ +.+.+.+++.. +.......|.+..|.++||+++++++... +.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~ 91 (401)
T TIGR01264 14 NPIRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DG 91 (401)
T ss_pred hHHHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CC
Confidence 3344555555443 34688999999973222223 34444444444 33333456999999999999999999643 33
Q ss_pred cccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhc
Q 013839 112 VVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKN 191 (435)
Q Consensus 112 ~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~ 191 (435)
.+.+++|+ +|+|+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+++..++++++|++.+++.+.
T Consensus 92 ~~~~~~i~--~t~G~~~al~~~--~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~- 166 (401)
T TIGR01264 92 PIEADDVV--LCSGCSHAIEMC--IAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID- 166 (401)
T ss_pred CCCHHHEE--ECcChHHHHHHH--HHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc-
Confidence 46688998 999999999888 6677889999999999999999999999999999987434468999999998886
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccc
Q 013839 192 APDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKS 271 (435)
Q Consensus 192 ~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 271 (435)
.+++++++++||||||.+++.+++++|+++|++++++||+||+|.+|.+++. ...++..+.. ..++|+++||||.
T Consensus 167 --~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~-~~~vi~~~SfSK~ 241 (401)
T TIGR01264 167 --EKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA--TFEPLASLSS-TVPILSCGGLAKR 241 (401)
T ss_pred --cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc--ccccHHHcCC-CCcEEEEccCccc
Confidence 5678999999999999999999999999999999999999999999987641 2334444322 2369999999999
Q ss_pred ccccCCcccEEEEEecC-hhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 272 MGLYGHRVGCLSILCVD-SKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLR 350 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 350 (435)
|+++|+|+||+++ ++ ......+++.+++... ...+++.+.|.++..+|.+. .++++++.+++++++++.+.
T Consensus 242 ~~~~GlRiG~iv~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-----~~~~l~~~~~~~~~~r~~l~ 313 (401)
T TIGR01264 242 WLVPGWRLGWIII--HDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRT-----PQEYFDGTLSVLESNAMLCY 313 (401)
T ss_pred CCCccceEEEEEe--cCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHH
Confidence 9999999999974 22 2223336666665433 34567889999999999652 13678889999999999999
Q ss_pred HHHHhhCCCCCccccccCcceeEecCCC----------HHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHH
Q 013839 351 QNLEKLGSSLNWEHITNQLGMFCFSGLT----------PYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYL 412 (435)
Q Consensus 351 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~ 412 (435)
+.|++++ ++.+..|++|+|+|+.+. .+++..+++++||.+.||. ||+++. ++++++++
T Consensus 314 ~~L~~~~---~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~~~ 389 (401)
T TIGR01264 314 GALAAVP---GLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMMEEA 389 (401)
T ss_pred HHHHhCC---CCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHHHH
Confidence 9999873 256677899999999742 3455777777999999873 999986 78999999
Q ss_pred HHHHHHHHHhh
Q 013839 413 ANAIHEVTRSE 423 (435)
Q Consensus 413 ~~~l~~~l~~~ 423 (435)
+++|+++++++
T Consensus 390 l~rl~~~~~~~ 400 (401)
T TIGR01264 390 CSRIQEFCERH 400 (401)
T ss_pred HHHHHHHHhcc
Confidence 99999988653
No 35
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-46 Score=366.10 Aligned_cols=343 Identities=13% Similarity=0.081 Sum_probs=273.1
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcc-ccCC-CeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDV-VKEG-RSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~-~v~~~~t~g 125 (435)
++.++|+|++|+| +. .+++.........+.......|++ .|.++||+++++++....+.. ++++ +|. +|+|
T Consensus 42 ~~~~~i~L~~g~p-~~---~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~--it~G 114 (410)
T PRK06290 42 PDMELIDMGVGEP-DE---MADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVI--HSIG 114 (410)
T ss_pred CCCCeEEcCCCCC-CC---CCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEE--EccC
Confidence 4567999999996 32 233333333333333333456875 899999999999985433333 4465 798 9999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAH 205 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~ 205 (435)
+++++.++ +.+++.+||+|++++|+|+.+...++..|++++.+++.++.++.+|++.+++++. .+++++++++||
T Consensus 115 s~~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~ 189 (410)
T PRK06290 115 SKPALAML--PSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK---EKAKLLYLNYPN 189 (410)
T ss_pred HHHHHHHH--HHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc---ccceEEEEECCC
Confidence 99999888 6777899999999999999999999999999999998434457889999998886 578999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEE
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSIL 285 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~ 285 (435)
||||.+++.+++++|+++|++|+++||+||+|.++.+++. ..++..+.+..+++|+++||||.+|++|+|+||+++
T Consensus 190 NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~---~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~- 265 (410)
T PRK06290 190 NPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK---PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG- 265 (410)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC---CcChhcCCCccccEEEEeechhhcCCchhheEeEEe-
Confidence 9999999999999999999999999999999999987531 223333333456789999999999999999999974
Q ss_pred ecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc
Q 013839 286 CVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI 365 (435)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 365 (435)
+++ +++.+.+.......+.+.++|.++..+|.+. +++++.+++++++++.+.+.|+++| +.+.
T Consensus 266 --~~~----l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~ 328 (410)
T PRK06290 266 --NEL----IVKAFATVKDNNDSGQFIAIQKAGIYALDHP-------EITEKIREKYSRRLDKLVKILNEVG----FKAE 328 (410)
T ss_pred --CHH----HHHHHHHHHhccccCCcHHHHHHHHHHhhCc-------HHHHHHHHHHHHHHHHHHHHHHhCC----Ceec
Confidence 888 8888887776666677788999999999874 4567888999999999999999886 4577
Q ss_pred ccCcceeEecCCC-----------H-HHHHHHhhhccEEEeCCC------cEEecc--CCCCcHHHHHHHHHHHHHhh
Q 013839 366 TNQLGMFCFSGLT-----------P-YQVDRLAKEFHIYMTQDG------RISMAG--VTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 366 ~~~~g~~~~~~~~-----------~-~~~~~ll~~~gI~i~pgg------Ris~~~--~~~e~i~~~~~~l~~~l~~~ 423 (435)
++++|||+|+.+. . ++.+.|+++.+|.+.||. ||+++. .++++.++++++|++.|..+
T Consensus 329 ~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 329 MPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 8899999998552 2 455777776678887862 999973 26788899999999888654
No 36
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-46 Score=366.41 Aligned_cols=340 Identities=17% Similarity=0.188 Sum_probs=272.9
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
.++++++|+.|.| +. +++..+.+...+.+..+ ...|.+..|.+++|+++++++....+..+++++|. +|+|++
T Consensus 30 ~~~~~i~l~~g~~-~~---~~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~--it~G~~ 102 (387)
T PRK08960 30 AGHDVIHLEIGEP-DF---TTAEPIVAAGQAALAAG-HTRYTAARGLPALREAIAGFYAQRYGVDVDPERIL--VTPGGS 102 (387)
T ss_pred cCCCeEEeCCCCC-CC---CCCHHHHHHHHHHHhcC-CCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEE--EccCcH
Confidence 4578999999996 32 33444444444444333 45699999999999999999853333345588999 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++.++ +..++.+||+|++++|+|+.+...++..|.+++.+++..+.++.+|++++++.++ ++++++++++||||
T Consensus 103 ~al~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NP 177 (387)
T PRK08960 103 GALLLA--SSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN---ADTVGALVASPANP 177 (387)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC---ccceEEEEECCCCC
Confidence 999998 6667899999999999999999999999999999998433457899999999887 56788899999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|++|++++|+||+|.++.+++. ..++. ...+++++++||||.+|++|+|+||+++
T Consensus 178 tG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~---~~~~~---~~~~~vi~~~S~SK~~g~~GlRiG~~~~--- 248 (387)
T PRK08960 178 TGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD---AASVL---EVDDDAFVLNSFSKYFGMTGWRLGWLVA--- 248 (387)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC---CCChh---hccCCEEEEeecccccCCcccEEEEEEc---
Confidence 99999999999999999999999999999999887531 22222 2346899999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+.......+++.+.|.++..++.+. +.+++++.++.++++++.+.+.|+.++.. .+..+
T Consensus 249 ~~~----~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-----~~~~l~~~~~~~~~~~~~l~~~L~~~~~~---~~~~p 316 (387)
T PRK08960 249 PPA----AVPELEKLAQNLYISASTPAQHAALACFEPE-----TLAILEARRAEFARRRDFLLPALRELGFG---IAVEP 316 (387)
T ss_pred CHH----HHHHHHHHHhhhccCCCHHHHHHHHHHhhcC-----cHHHHHHHHHHHHHHHHHHHHHHHhcCCc---CCcCC
Confidence 788 8888888776666778999999998888643 23678889999999999999999987631 12457
Q ss_pred CcceeEecCC-----CH-HHHHHHhhhccEEEeCC---C--------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 368 QLGMFCFSGL-----TP-YQVDRLAKEFHIYMTQD---G--------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 368 ~~g~~~~~~~-----~~-~~~~~ll~~~gI~i~pg---g--------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
++|+|+|+.+ +. +++..+++++||.+.|| + ||+++. +.+++..++++|+++++
T Consensus 317 ~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 317 QGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR 386 (387)
T ss_pred CeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 8999999865 32 34566777789999987 1 999986 67788888888877664
No 37
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-46 Score=369.38 Aligned_cols=349 Identities=15% Similarity=0.175 Sum_probs=293.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhc---CCC-CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA---GSE-FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
..+..++|+.|.| +. ...|...++++..... ... ..+|.++.|.++||++|++++....+....+++|+ +|
T Consensus 87 ~~~~~i~f~~g~p-~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Ii--iT 161 (459)
T COG1167 87 DDPSVIDFAGGLP-DP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIV--IT 161 (459)
T ss_pred CCCceecCCCCCC-Cc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEE--Ee
Confidence 3489999999997 32 2667777777766654 222 46799999999999999999963344445588999 99
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCC
Q 013839 124 LSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPS 203 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~ 203 (435)
+|+++|+.++ +..+++|||+|++++|+|.+...+++.+|++++.||+ |+ .|+|+|.|++.+.+. +...++++++
T Consensus 162 ~G~q~al~l~--~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~-d~--~G~~~e~le~~~~~~-~~k~~y~~P~ 235 (459)
T COG1167 162 SGAQQALDLL--LRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPV-DE--DGIDPEALEEALAQW-KPKAVYVTPT 235 (459)
T ss_pred CCHHHHHHHH--HHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCC-CC--CCCCHHHHHHHHhhc-CCcEEEECCC
Confidence 9999999988 6667889999999999999999999999999999998 33 389999999999865 2446778899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEE
Q 013839 204 AHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLS 283 (435)
Q Consensus 204 p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~ 283 (435)
.|||||.++|.+++++|+++|++|+++||+||.|.+|.+++. ..+++..+ +..+++|+++||||++. ||+|+||++
T Consensus 236 ~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~--p~~~l~~l-d~~~rViy~gSFSK~l~-PglRlG~vv 311 (459)
T COG1167 236 FQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGP--PPPPLKAL-DAPGRVIYLGSFSKTLA-PGLRLGYVV 311 (459)
T ss_pred CCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCC--CCCChHhh-CCCCCEEEEeeehhhcc-cccceeeee
Confidence 999999999999999999999999999999999999999853 23334444 45789999999999997 999999997
Q ss_pred EEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc
Q 013839 284 ILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWE 363 (435)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 363 (435)
+ +++ +++.+.........+++.+.|.+++..+.++. |.++++.+++.|+++++.+.+.|.+... ..+.
T Consensus 312 ~---p~~----~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~----~~~hl~~lR~~y~~rr~~l~~~L~~~~~-~~~~ 379 (459)
T COG1167 312 A---PPE----LIEKLLRLKQAADLGPSSLSQAALAAFLLSGH----YDRHLRRLRREYARRRDALLEALAEYLP-ELAT 379 (459)
T ss_pred C---CHH----HHHHHHHHHHHhcCCCChHHHHHHHHHHHcCC----HHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCee
Confidence 4 888 89999988888889999999999999998654 7799999999999999999999998853 3467
Q ss_pred ccccCcceeEecCC----CHH-HHHHHhhhccEEEeC-CC------------cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 364 HITNQLGMFCFSGL----TPY-QVDRLAKEFHIYMTQ-DG------------RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 364 ~~~~~~g~~~~~~~----~~~-~~~~ll~~~gI~i~p-gg------------Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
+..|.+|+|+|+.+ +.. ++..+ .++||.+.| |- |++|+..+++++++++++|.+++++..
T Consensus 380 ~~~p~gG~flwl~l~~~~~~~~l~~~a-~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 380 WTRPEGGLFLWLELPEGIDARELLAAA-LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred eecCCceEEEEEEcCCCCCHHHHHHHH-HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 78899999999966 433 44555 568999998 41 999998889999999999999987654
No 38
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.6e-46 Score=366.45 Aligned_cols=364 Identities=13% Similarity=0.106 Sum_probs=282.6
Q ss_pred hHHHHHhc-CCCCCeeeeecceecCCCCCcccchHHHHHHHH-hcCCCCCCCCCCcccHHHHHHHHHhHcCCC------C
Q 013839 39 GVTEAFLA-DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAK-IAGSEFLESISASVSTKMVEESVKLVYGKD------S 110 (435)
Q Consensus 39 ~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~------~ 110 (435)
....++.. ..++++|+|+.|.| +......|++.+.+++.. +......+|+++.|.++||+++++++.... +
T Consensus 21 ~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~ 99 (412)
T PTZ00433 21 TVTDNAKPSPSPKSIIKLSVGDP-TLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLK 99 (412)
T ss_pred HHHHhhccCCCCCCeeecCCcCC-CCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhcccccccc
Confidence 44445543 36689999999997 321112344455555544 333335679999999999999999985321 2
Q ss_pred ccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhh
Q 013839 111 DVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIK 190 (435)
Q Consensus 111 ~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~ 190 (435)
..+++++|+ +|+|+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+++..++++++|++++++.+.
T Consensus 100 ~~~~~~~i~--it~G~~~al~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~ 175 (412)
T PTZ00433 100 STIKKDNVV--LCSGVSHAILMA--LTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD 175 (412)
T ss_pred CCCChhhEE--EeCChHHHHHHH--HHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc
Confidence 345688999 999999999998 6677889999999999999999999999999999998434568999999998887
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccc
Q 013839 191 NAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAK 270 (435)
Q Consensus 191 ~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK 270 (435)
++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+.. ..++++++||||
T Consensus 176 ---~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~-~~~~i~~~SfSK 249 (412)
T PTZ00433 176 ---DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA--TFTSVADFDT-TVPRVILGGTAK 249 (412)
T ss_pred ---cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC--CccchhhccC-CCceEEEccchh
Confidence 5688999999999999999999999999999999999999999999987641 2234444422 235899999999
Q ss_pred cccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 271 SMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLR 350 (435)
Q Consensus 271 ~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 350 (435)
.+|++|+|+||+++ ..++.....+++.+.+... ...+++.+.|.++..++.+. .+.++++.+++++++++.+.
T Consensus 250 ~~~~pGlRlG~~i~-~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-----~~~~~~~~~~~~~~~r~~l~ 322 (412)
T PTZ00433 250 NLVVPGWRLGWLLL-VDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNT-----PQEHLEQIVAKLEEGAMVLY 322 (412)
T ss_pred hcCCCCeeEEEEEE-eCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcC-----cHHHHHHHHHHHHHHHHHHH
Confidence 99999999999973 2122111237777766543 33578999999999888752 13678889999999999999
Q ss_pred HHHHhhCCCCCccccccCcceeEecCCC----------HHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHH
Q 013839 351 QNLEKLGSSLNWEHITNQLGMFCFSGLT----------PYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYL 412 (435)
Q Consensus 351 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~ 412 (435)
+.|+... .+.+..+++|+|+|+.++ .++++.+++++||.+.||. ||+++. .+++++++
T Consensus 323 ~~L~~~~---~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~l~~a 398 (412)
T PTZ00433 323 NHIGECI---GLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEVLREA 398 (412)
T ss_pred HHHhcCC---CCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHHHHHH
Confidence 9998753 155678899999998542 3456777767899999972 999976 68889999
Q ss_pred HHHHHHHHHhhh
Q 013839 413 ANAIHEVTRSEQ 424 (435)
Q Consensus 413 ~~~l~~~l~~~~ 424 (435)
+++|+++++...
T Consensus 399 l~~l~~~~~~~~ 410 (412)
T PTZ00433 399 VERIKAFCERHK 410 (412)
T ss_pred HHHHHHHHHHhc
Confidence 999999987543
No 39
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=3.3e-46 Score=364.01 Aligned_cols=340 Identities=17% Similarity=0.207 Sum_probs=275.8
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCch
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSGT 127 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg~ 127 (435)
.+..|+|+.|.| +. +.+ +.+.++...........|++..|.++||+++++++...++..++++ +|+ +|+|++
T Consensus 27 ~~~~i~l~~~~p-~~---~~~-~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~--~t~G~~ 99 (387)
T PRK07683 27 YDNLISLTIGQP-DF---PTP-SHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEII--VTIGAS 99 (387)
T ss_pred cCCeEEecCCCC-CC---CCC-HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEE--EeCChH
Confidence 467899999996 32 223 3344444444433356799999999999999999954333334466 888 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+|+.++ +..++.+||+|+++.|+|.++...++..|++++.++. +++++.+|.+++++.+. ++++++++++||||
T Consensus 100 ~al~~~--~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~---~~~~~i~i~~p~NP 173 (387)
T PRK07683 100 EAIDIA--FRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDT-RSTGFRLTAEALENAIT---EKTRCVVLPYPSNP 173 (387)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeec-CcccCCCCHHHHHHhcC---cCceEEEEeCCCCC
Confidence 999988 6667889999999999999999999999999999987 45667788899999887 56789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|+++++++|+||+|.++.+++ ...++..+.+..+++++++||||.+|+||+|+||+++
T Consensus 174 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~--- 247 (387)
T PRK07683 174 TGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ---PHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA--- 247 (387)
T ss_pred CCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC---CcCChhhccCCcCCeEEEeeccccccCccceeEEEEc---
Confidence 9999999999999999999999999999999998753 1234444444557899999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+.......+++.+.|.++..+|.++. .+.++.+++++++++.+.+.|++.+ +.+..+
T Consensus 248 ~~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~ 313 (387)
T PRK07683 248 PSY----LAKHILKVHQYNVTCASSISQYAALEALTAGK------DDAKMMRHQYKKRRDYVYNRLISMG----LDVEKP 313 (387)
T ss_pred CHH----HHHHHHHHHHhccCCCChHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHHHcC----CcccCC
Confidence 888 77777776555556677889999999997653 5677888899999999999998875 457788
Q ss_pred CcceeEecCC-----CH-HHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 368 QLGMFCFSGL-----TP-YQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 368 ~~g~~~~~~~-----~~-~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
++|+|+|+.+ +. +++..+++++||.+.||. ||+++. +++++.+++++|++++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 314 TGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 9999999853 32 455677788999999972 999987 888999999999998864
No 40
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=5e-46 Score=363.17 Aligned_cols=342 Identities=15% Similarity=0.167 Sum_probs=272.7
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcccc-CCCeeeEecCCchh
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVK-EGRSAGVQALSGTG 128 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~v~~~~t~gg~~ 128 (435)
++.|+|+.|.| +. ..+ +.+.+++..........|++..|.++||+++++++...++..+. +++|+ +|+|+++
T Consensus 30 ~~~i~l~~~~~-~~---~~~-~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~--it~G~~~ 102 (391)
T PRK07309 30 PGILKLTLGEP-DF---TTP-DHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEIL--VTIGATE 102 (391)
T ss_pred CCeEEcCCCCC-CC---CCC-HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEE--EeCChHH
Confidence 67999999996 32 223 33444444333222456999999999999999999543333333 46888 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT 208 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt 208 (435)
++.++ +..++.+||+|++++|+|.++...++..|++++.++. +++++.+|++.+++++.+..++++++++++|||||
T Consensus 103 al~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPt 179 (391)
T PRK07309 103 ALSAS--LTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDT-TENDFVLTPEMLEKAILEQGDKLKAVILNYPANPT 179 (391)
T ss_pred HHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEec-CCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCC
Confidence 99998 6777889999999999999999999999999999987 45567899999999987543467899999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecC
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVD 288 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~ 288 (435)
|.+++.+++++|+++|++|++++|+|++|.++.+++. ...++... ..+++++++||||.||++|+|+||+++ +
T Consensus 180 G~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRvG~~v~---~ 252 (391)
T PRK07309 180 GVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE--PHVSIAEY--LPDQTILINGLSKSHAMTGWRIGLIFA---P 252 (391)
T ss_pred CcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--CCCCHHHh--ccCCEEEEecChhhccCccceeEEEEe---C
Confidence 9999999999999999999999999999999998531 22233322 236899999999999999999999974 8
Q ss_pred hhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC
Q 013839 289 SKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ 368 (435)
Q Consensus 289 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 368 (435)
++ +++.+.........+++.++|.++..+|.+.. ......+++++++++.+.+.|++.+ +.+..++
T Consensus 253 ~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~p~ 318 (391)
T PRK07309 253 AE----FTAQLIKSHQYLVTAATTMAQFAAVEALTNGK------DDALPMKKEYIKRRDYIIEKMTDLG----FKIIKPD 318 (391)
T ss_pred HH----HHHHHHHHHhhcccCCChHHHHHHHHHHhCCh------hHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCC
Confidence 88 77777765555556788899999999998753 2335677888999999999998876 4677889
Q ss_pred cceeEecCC------C-HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 369 LGMFCFSGL------T-PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 369 ~g~~~~~~~------~-~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
+|+|+|+.+ + .+++.++++++||.+.||. |++++. +.+++++++++|+++++++
T Consensus 319 gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 319 GAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred eeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 999999754 2 2345677778999999872 999986 7789999999999988664
No 41
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.7e-46 Score=369.74 Aligned_cols=348 Identities=15% Similarity=0.206 Sum_probs=273.8
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcC------------CCCCCCCCCcccHHHHHHHHHhHcCCCC--ccccC
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG------------SEFLESISASVSTKMVEESVKLVYGKDS--DVVKE 115 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 115 (435)
...|+|+.++. +.+.+.+.+....... .....|++..|.++||+++|+++....+ .++++
T Consensus 38 ~g~i~L~~~En------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~ 111 (468)
T PLN02450 38 SGIIQMGLAEN------QLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP 111 (468)
T ss_pred CeeEEeehhHh------HhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence 37999999993 3333555655554311 1234499999999999999999954322 23568
Q ss_pred CCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCCCCeeeeeecCCCCCCcChHhHHHHhhcC--
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQIPERTYHYYDPDSKSLDFAALMDDIKNA-- 192 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-- 192 (435)
++|+ +|+|+++++.++ +.++++|||.|++++|+|+.|...+. ..|++++++++.+++++.+|++.+++++.+.
T Consensus 112 ~~Ii--it~Ga~~al~~l--~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~ 187 (468)
T PLN02450 112 NKLV--LTAGATSANETL--MFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQK 187 (468)
T ss_pred HHeE--EccChHHHHHHH--HHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHh
Confidence 8998 999999999888 77788999999999999999988887 5899999999844567888999999888642
Q ss_pred -CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhh--------hcCCeEE
Q 013839 193 -PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFL--------EDEHLIG 263 (435)
Q Consensus 193 -~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~--------~~~~~~i 263 (435)
..++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++. ...++.... +..++++
T Consensus 188 ~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~~~~~~vi 265 (468)
T PLN02450 188 LNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENTDVSNRVH 265 (468)
T ss_pred cCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccCCCCCcEE
Confidence 23678999999999999999999999999999999999999999999887642 122222221 1256899
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
+++||||.|+++|+|+||++ +.++. ++..+.+.. ....++.++|.++..+|.++.+.+ +++++.+++++
T Consensus 266 ~l~S~SK~~~l~GlRiG~li--~~~~~----l~~~~~~~~--~~~~~s~~~Q~a~~~~L~~~~~~~---~~l~~~~~~l~ 334 (468)
T PLN02450 266 IVYSLSKDLGLPGFRVGAIY--SNDEM----VVSAATKMS--SFGLVSSQTQYLLSALLSDKKFTK---NYLEENQKRLK 334 (468)
T ss_pred EEEeccccCCCCCccEEEEE--ECCHH----HHHHHHHHh--hcCCCCHHHHHHHHHHhCCchhHH---HHHHHHHHHHH
Confidence 99999999999999999996 43344 455555543 234578899999999998864211 35778889999
Q ss_pred HHHHHHHHHHHhhCCCCCccccccCcceeEecCCC-----------HHHHHHHhhhccEEEeCCC----------cEEec
Q 013839 344 RKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT-----------PYQVDRLAKEFHIYMTQDG----------RISMA 402 (435)
Q Consensus 344 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~ll~~~gI~i~pgg----------Ris~~ 402 (435)
++++.+.+.|+++| +.+.++++|+|+|+.+. .++..++++++||.+.||. ||+|+
T Consensus 335 ~rr~~l~~~L~~~g----i~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~ 410 (468)
T PLN02450 335 QRQKKLVSGLEAAG----IKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFA 410 (468)
T ss_pred HHHHHHHHHHHHcC----CcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEec
Confidence 99999999999886 45778999999999763 1245667777899999982 99998
Q ss_pred cCCCCcHHHHHHHHHHHHHhhh
Q 013839 403 GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 403 ~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
..+++++++++++|++++++..
T Consensus 411 ~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 411 NMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred CCCHHHHHHHHHHHHHHHHhcc
Confidence 6678999999999999997655
No 42
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.8e-46 Score=361.99 Aligned_cols=344 Identities=17% Similarity=0.169 Sum_probs=274.9
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHH-hcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcccc-CCCeeeEecCCch
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAK-IAGSEFLESISASVSTKMVEESVKLVYGKDSDVVK-EGRSAGVQALSGT 127 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~v~~~~t~gg~ 127 (435)
++.++|+.|.| +. +++.. +.+++.+ +.......|++..|.+++|+++++++....+.... +++++ +++|++
T Consensus 27 ~~~~~l~~g~~-~~---~~~~~-~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~--~t~G~~ 99 (389)
T PRK05957 27 PGTISLGQGVV-SY---PPPPE-AIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIV--VTAGSN 99 (389)
T ss_pred CCeEEccCCCC-CC---CCCHH-HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEE--EeCChH
Confidence 57899999996 32 33333 3444443 33333457999999999999999998433232233 56788 899999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++..+ +..++.+||+|++++|+|..+...++..|++++.++. ++++++|++++++.++ ++++++++++||||
T Consensus 100 ~~l~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~---~~~klv~~~~p~NP 172 (389)
T PRK05957 100 MAFMNA--ILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPT--DDNYQLQPEAIEQAIT---PKTRAIVTISPNNP 172 (389)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeec--CCCCCcCHHHHHHhcC---cCceEEEEeCCCCC
Confidence 999887 6666889999999999999998888999999999987 3567899999999987 57899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...+.....+...++|+++||||.+|++|+|+||+++
T Consensus 173 tG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~--- 247 (389)
T PRK05957 173 TGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV--KHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVI--- 247 (389)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC--CccChhhCCCccCcEEEEecchhhccCccceeEEEec---
Confidence 99999999999999999999999999999999987642 1122333345557899999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++++.+.......+++.+.|.++..+|.++. .+.++.+++++++++.+.+.|+.++. .+.+.++
T Consensus 248 ~~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~~~~~ 315 (389)
T PRK05957 248 PIH----LLEAIKKIQDTILICPPVVSQYAALGALQVGK------SYCQQHLPEIAQVRQILLKSLGQLQD--RCTLHPA 315 (389)
T ss_pred CHH----HHHHHHHHHhhcccCCCcHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHHhcCC--CccccCC
Confidence 778 88888887766666788899999999997643 45666777789999999999987642 1356678
Q ss_pred CcceeEecCC----CH-HHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 368 QLGMFCFSGL----TP-YQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 368 ~~g~~~~~~~----~~-~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
++|+|+|+.+ +. +++..+++++||.+.||. |++++..+++++++++++|.+.+++..
T Consensus 316 ~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 316 NGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred CeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhh
Confidence 9999999865 33 566777777899999971 999976678889999999999887643
No 43
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=7.1e-46 Score=362.27 Aligned_cols=338 Identities=14% Similarity=0.164 Sum_probs=271.0
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
.++++++|+.|.| +. +.++...+.+...+... ...|++..|.++||+++++++....+..+++++|+ +|+|++
T Consensus 28 ~~~~~i~l~~~~~-~~---~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~--~t~G~~ 100 (388)
T PRK07337 28 AGRDIIHMGIGEP-DF---TAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAWYARRFGLDVAPERIV--VTAGAS 100 (388)
T ss_pred cCCCEEEeCCcCC-CC---CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEE--EecCcH
Confidence 4578999999996 32 23333333333333333 56699999999999999999854333345588988 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+|+.++ +..++.+||+|++++|+|+.+...++..|++++.+++..++++++|++++++.+. ++++++++++||||
T Consensus 101 ~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NP 175 (388)
T PRK07337 101 AALLLA--CLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG---ERTRGVLLASPSNP 175 (388)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC---ccceEEEEECCCCC
Confidence 999888 6667899999999999999999999999999999998434568999999999887 67889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|+++++++|+||+|.++.+++. ..+.. ...+++++++||||.+|++|+|+||+++
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~---~~~~~vi~~~S~SK~~~~~G~RiG~~~~--- 246 (388)
T PRK07337 176 TGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA---PVSAL---SLGDDVITINSFSKYFNMTGWRLGWLVV--- 246 (388)
T ss_pred CCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC---CcChh---hccCCEEEEEechhhcCCchhheeeeec---
Confidence 99999999999999999999999999999999887531 11221 2346799999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc-cc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEH-IT 366 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~ 366 (435)
+++ +++.+.+.......+.+.+.|.++..++.+.. .+..++.++.++++++.+.+.|++++. .. ..
T Consensus 247 ~~~----l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~r~~~~~~L~~~~~----~~~~~ 313 (388)
T PRK07337 247 PEA----LVGTFEKLAQNLFICASALAQHAALACFEPDT-----LAIYERRRAEFKRRRDFIVPALESLGF----KVPVM 313 (388)
T ss_pred CHH----HHHHHHHHHHHhccCCChHHHHHHHHHhccCc-----hHHHHHHHHHHHHHHHHHHHHHHhcCC----ccccC
Confidence 777 88888877666666788999999988887543 133567789999999999999988763 32 46
Q ss_pred cCcceeEecCCC---------H-HHHHHHhhhccEEEeCCC-----------cEEeccCCCCcHHHHHHHHHHHH
Q 013839 367 NQLGMFCFSGLT---------P-YQVDRLAKEFHIYMTQDG-----------RISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 367 ~~~g~~~~~~~~---------~-~~~~~ll~~~gI~i~pgg-----------Ris~~~~~~e~i~~~~~~l~~~l 420 (435)
+++|+|+|+.+. . +++..+++++||.+.||. |++++. +++++.+++++|++++
T Consensus 314 p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 314 PDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred CCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 789999999652 2 345677788999998861 999987 7888999999998764
No 44
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.1e-45 Score=361.29 Aligned_cols=339 Identities=15% Similarity=0.103 Sum_probs=267.7
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcc--ccCC-CeeeEecC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDV--VKEG-RSAGVQAL 124 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~--~~~~-~v~~~~t~ 124 (435)
.+.+.|+|+.|+| +. .+ ++.+.++....... ...|+++.|.++||+++++++...++.+ ++++ +|+ +|+
T Consensus 26 ~~~~~i~l~~~~p-~~---~~-~~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~--it~ 97 (393)
T TIGR03538 26 ASKPPIALSIGEP-KH---PT-PAFVLEALRENLHG-LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVL--PVN 97 (393)
T ss_pred cCCCeEEecCCCC-CC---CC-CHHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEE--ECC
Confidence 4689999999996 32 22 34444444443333 5679999999999999999995443222 4464 788 899
Q ss_pred CchhHHHHHHHHHHHhCCCCE--EEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeC
Q 013839 125 SGTGACRLFAEFQRRFHPESH--IYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHP 202 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~ 202 (435)
|+++++.++ +..+++|||+ |++++|+|..|...++..|++++.+++.+++++.+|++++++++. .++++++++
T Consensus 98 Ga~~al~~~--~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~ 172 (393)
T TIGR03538 98 GTREALFAF--AQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW---RRCQLLFVC 172 (393)
T ss_pred CcHHHHHHH--HHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh---hcceEEEEe
Confidence 999999988 6777899986 999999999999999999999999998544458899999999886 567899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhh----hcCCeEEEEecccccccccCCc
Q 013839 203 SAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFL----EDEHLIGCAQSYAKSMGLYGHR 278 (435)
Q Consensus 203 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~s~SK~~g~~G~R 278 (435)
+||||||.+++.+++++|+++|++|+++||+||+|.++.+++..........+. +..+++|+++||||.|+++|+|
T Consensus 173 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlR 252 (393)
T TIGR03538 173 SPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLR 252 (393)
T ss_pred CCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccc
Confidence 999999999999999999999999999999999999988753101111111111 1246899999999999999999
Q ss_pred ccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 013839 279 VGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGS 358 (435)
Q Consensus 279 vG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 358 (435)
+||+++ +++ +++.+.+.......+++.+.|.++...+... +++++.++.++++++.+.+.|++. .
T Consensus 253 vG~~i~---~~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~L~~~-~ 317 (393)
T TIGR03538 253 SGFVAG---DAE----ILKAFLRYRTYHGCAMPIPTQLASIAAWNDE-------QHVRENRALYREKFAAVLEILGQV-L 317 (393)
T ss_pred eEEEec---CHH----HHHHHHHHHHhhccCcCHHHHHHHHHHhcCh-------HHHHHHHHHHHHHHHHHHHHHHhh-C
Confidence 999964 788 7777777665555677889999988877543 678888999999999999999875 2
Q ss_pred CCCccccccCcceeEecCCC---HHHHHHHhhhccEEEeCC------------C----cEEeccCCCCcHHHHHHHHHHH
Q 013839 359 SLNWEHITNQLGMFCFSGLT---PYQVDRLAKEFHIYMTQD------------G----RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 359 ~~~~~~~~~~~g~~~~~~~~---~~~~~~ll~~~gI~i~pg------------g----Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
.+..+++|+|+|+.+. .+++..+++++||.+.|| | ||+|+. +++++++++++|+++
T Consensus 318 ----~~~~p~gg~f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 318 ----DLELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERIRSF 392 (393)
T ss_pred ----cccCCCeeEEEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHHHHh
Confidence 2557899999999873 345567767789999765 1 999977 788899999998764
No 45
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=3.9e-46 Score=363.53 Aligned_cols=347 Identities=14% Similarity=0.089 Sum_probs=274.7
Q ss_pred hhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC
Q 013839 37 INGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG 116 (435)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 116 (435)
++.....+. .+.++|+|+.|.| +. +.++. +.++...........|++..|.+++|+++++++....+....++
T Consensus 19 ~~~~~~~~~--~~~~~i~l~~g~~-~~---~~~~~-~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~ 91 (386)
T PRK09082 19 IFTVMSALA--AEHGAINLSQGFP-DF---DGPPY-LVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDAD 91 (386)
T ss_pred HHHHHHHHH--hhCCEEEecCCCC-CC---CCCHH-HHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC
Confidence 334444433 2357899999996 33 22223 33333333222245699999999999999999743322223343
Q ss_pred -CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCC
Q 013839 117 -RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDS 195 (435)
Q Consensus 117 -~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 195 (435)
+++ +|+|+++|+.++ +..++.+||+|++++|+|..+...++..|++++.+++ +++++++|++++++.+. ++
T Consensus 92 ~~i~--~t~G~~~al~~~--~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~---~~ 163 (386)
T PRK09082 92 SEIT--VTAGATEALFAA--ILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVAL-QPPDFRVDWQRFAAAIS---PR 163 (386)
T ss_pred CcEE--EeCCHHHHHHHH--HHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccccCCHHHHHHhcC---cc
Confidence 788 899999999988 6677899999999999999999999999999999998 44568999999999987 57
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc
Q 013839 196 SFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY 275 (435)
Q Consensus 196 ~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~ 275 (435)
++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+.+..+++++++||||.+|++
T Consensus 164 ~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~ 241 (386)
T PRK09082 164 TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA--GHASVLRHPELRERAFVVSSFGKTYHVT 241 (386)
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC--CCCChhhCcCccCcEEEEeechhhccch
Confidence 88999999999999999999999999999999999999999999988531 2234444444467899999999999999
Q ss_pred CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013839 276 GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEK 355 (435)
Q Consensus 276 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 355 (435)
|+|+||+++ +++ +++.+++.......+++.+.|.+++.++.... ++.++.++.++++++.+.+.|++
T Consensus 242 G~RiG~iv~---~~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~~ 308 (386)
T PRK09082 242 GWKVGYCVA---PAA----LSAEFRKVHQYNTFTVNTPAQLALADYLRAEP------EHYLELPAFYQAKRDRFRAALAN 308 (386)
T ss_pred hhhhhhhhC---CHH----HHHHHHHHHhhhcCCCChHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999974 788 88888887766667789999999998886422 66778889999999999999998
Q ss_pred hCCCCCccccccCcceeEecCC------CH-HHHHHHhhhccEEEeCCC------------cEEeccCCCCcHHHHHHHH
Q 013839 356 LGSSLNWEHITNQLGMFCFSGL------TP-YQVDRLAKEFHIYMTQDG------------RISMAGVTTGNVNYLANAI 416 (435)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~~~~~------~~-~~~~~ll~~~gI~i~pgg------------Ris~~~~~~e~i~~~~~~l 416 (435)
.+ +.+.++++|+|+|+.+ +. +++..+++++||.+.||. ||+++. +++++++++++|
T Consensus 309 ~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl 383 (386)
T PRK09082 309 SR----FKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERL 383 (386)
T ss_pred CC----CcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHH
Confidence 75 5677889999999753 23 345667788999999861 999987 788899999988
Q ss_pred HH
Q 013839 417 HE 418 (435)
Q Consensus 417 ~~ 418 (435)
++
T Consensus 384 ~~ 385 (386)
T PRK09082 384 CQ 385 (386)
T ss_pred hh
Confidence 75
No 46
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-45 Score=359.83 Aligned_cols=343 Identities=18% Similarity=0.153 Sum_probs=275.3
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchh
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTG 128 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~ 128 (435)
.+++|+|+.|+| +. ++++ .+.+++..........|+++.|.+++|+++++++....+..+++++|. +|+|+++
T Consensus 23 ~~~~i~l~~g~~-~~---~~~~-~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~--~t~g~~~ 95 (382)
T PRK06108 23 REGVLPLWFGES-DL---PTPD-FIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIA--VTSSGVQ 95 (382)
T ss_pred cCCeEEecCCCC-CC---CCCH-HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEE--EeCChHH
Confidence 467999999996 32 3333 344444443322245599999999999999999854333335578988 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCC-CCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDP-DSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
++.++ +..++.+||+|++++|+|..+...++..|++++.++..++ .+|.+|++++++.+. ++++++++++||||
T Consensus 96 al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l~~p~NP 170 (382)
T PRK06108 96 ALMLA--AQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT---PRTRALFINSPNNP 170 (382)
T ss_pred HHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC---ccceEEEEECCCCC
Confidence 99888 6667889999999999999999999999999999998432 357799999999886 57889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|+++++++|+||+|.++.+++. ...+++..+.+..+++++++||||.||++|+|+||+++
T Consensus 171 tG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~--- 246 (382)
T PRK06108 171 TGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPG-GRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVA--- 246 (382)
T ss_pred CCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCC-CCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeC---
Confidence 99999999999999999999999999999999987511 12223333334457899999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+.......+++.+.|.++..+|.+.. +++++.+++++++++.+.+.|++++ ++.+..+
T Consensus 247 ~~~----~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~p 313 (382)
T PRK06108 247 PPA----LGQVLEKLIEYNTSCVAQFVQRAAVAALDEGE------DFVAELVARLRRSRDHLVDALRALP---GVEVAKP 313 (382)
T ss_pred CHH----HHHHHHHHHHhcccCCChHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHHhCC---CCcccCC
Confidence 778 77777776655567788999999999997653 6678888999999999999998873 2567788
Q ss_pred CcceeEecCC----C-HHHHHHHhhhccEEEeCC--------C--cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 368 QLGMFCFSGL----T-PYQVDRLAKEFHIYMTQD--------G--RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 368 ~~g~~~~~~~----~-~~~~~~ll~~~gI~i~pg--------g--Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
++|+|+|+.+ + .+++..+++++||.+.|| + ||+++. +++++++++++|+++++
T Consensus 314 ~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 314 DGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred CeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 9999999866 2 345577777889999886 1 999987 88999999999998764
No 47
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-45 Score=354.74 Aligned_cols=357 Identities=16% Similarity=0.196 Sum_probs=276.3
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCc--cccCCCeeeEecCCch
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSD--VVKEGRSAGVQALSGT 127 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~--~~~~~~v~~~~t~gg~ 127 (435)
..+++.++|.+ .+++.+.+.+.++++..........+|+++.|.++||+++++++.+.... +.+.++|+ +|+|++
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~--it~G~~ 79 (388)
T PRK08637 3 ATKYNATIGMA-TEKGGPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPI--VTNALT 79 (388)
T ss_pred ccceecceeeE-ecCCCcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceee--EccchH
Confidence 46789999998 44455677777777777655445778999999999999999998654321 11225677 899999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCCCCeeeeeecCCCCCCcChHhHHHHhhc-CCCCcEEEEeCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQIPERTYHYYDPDSKSLDFAALMDDIKN-APDSSFFLLHPSAH 205 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~-~~~~~~~v~~~~p~ 205 (435)
+++.++ +..+++|||+|++++|+|+.|...+. ..|++++.+|+. .+++++|++++++.++. ..+.++++++++||
T Consensus 80 ~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~-~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~ 156 (388)
T PRK08637 80 HGLSLV--ADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIF-DEDGGFDTDALKEALQAAYNKGKVIVILNFPN 156 (388)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEeccc-CCCCcCCHHHHHHHHHhhccCCCEEEEEeCCC
Confidence 999888 66678899999999999999998764 689999999983 24468999999998862 12456788899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHh-----cCceeeeeccCCCccCCCCcccHHHH-HHhhhcCCeE--EEEecccccccccCC
Q 013839 206 NPTGVDPTEEQWREISYQFKV-----KGHFPFFDMAYQGFASGDLDKDAQAI-RIFLEDEHLI--GCAQSYAKSMGLYGH 277 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~-----~~~~vi~Deay~~~~~~~~~~~~~~~-~~~~~~~~~~--i~~~s~SK~~g~~G~ 277 (435)
||||.+++.+++++|+++|++ |+++||+||+|.++.+++. ...++ ..+.+..+++ ++++|+||.+++||+
T Consensus 157 NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~--~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGl 234 (388)
T PRK08637 157 NPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS--YKESLFAALANLHSNILAVKLDGATKEEFVWGF 234 (388)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCc--cchhhHHHhhcccccceEEEeccccccCCCccc
Confidence 999999999999999999875 8999999999999988642 22232 2333444564 456799999999999
Q ss_pred cccEEEEEe----cChhHHHHHHHHHHH----HhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 013839 278 RVGCLSILC----VDSKQAAAIRSQIQQ----IARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTL 349 (435)
Q Consensus 278 RvG~~~~~~----~~~~~~~~~~~~l~~----~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 349 (435)
|+||+++ . .+++ +++.+.+ ..+....+++.+.|.++..+|.++. |.+++++.+..++++++.+
T Consensus 235 RlG~~~~-~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~----~~~~~~~~~~~~~~r~~~~ 305 (388)
T PRK08637 235 RVGFITF-GTKAGSSQT----VKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPE----FDKEKQEKFQILKERYEKT 305 (388)
T ss_pred ceEEEEE-ccccCCcHH----HHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 9999973 2 1356 5555543 2222345789999999999998764 5566777888899999999
Q ss_pred HHHHHhhCCCCCccccccCcceeEecCCC----HHHHHHHhhhccEEEeCCC----cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 350 RQNLEKLGSSLNWEHITNQLGMFCFSGLT----PYQVDRLAKEFHIYMTQDG----RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 350 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~ll~~~gI~i~pgg----Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
.+.|+..+.+..+.+.++++|+|+|+.+. .++++.+++++||.+.+.+ ||+++..+.+++++++++|+++++
T Consensus 306 ~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 306 KEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKAIK 385 (388)
T ss_pred HHHHHhhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHHHH
Confidence 99998765434577888899999999774 2345666677899987643 999987789999999999999987
Q ss_pred hh
Q 013839 422 SE 423 (435)
Q Consensus 422 ~~ 423 (435)
.+
T Consensus 386 ~~ 387 (388)
T PRK08637 386 DL 387 (388)
T ss_pred hc
Confidence 54
No 48
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.2e-45 Score=360.31 Aligned_cols=351 Identities=16% Similarity=0.209 Sum_probs=275.6
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhc------------CCCCCCCCCCcccHHHHHHHHHhHcCCCC--ccccC
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIA------------GSEFLESISASVSTKMVEESVKLVYGKDS--DVVKE 115 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 115 (435)
..+|+|+..+ | ....+.+.+.+.... ......|.+..|.++||+++|+++....+ .++++
T Consensus 47 ~g~i~l~~ae----N--~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p 120 (447)
T PLN02607 47 SGVIQMGLAE----N--QVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDP 120 (447)
T ss_pred CceEEEechh----h--hhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCH
Confidence 4699999998 3 223333333333211 01234488899999999999999954322 24678
Q ss_pred CCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCCCCeeeeeecCCCCCCcChHhHHHHhhcC--
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQIPERTYHYYDPDSKSLDFAALMDDIKNA-- 192 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-- 192 (435)
++|+ +|+|+++|+.++ +..++.|||.|+++.|+|+++...+. ..|+++++|++..+++|.+|++.+++++.+.
T Consensus 121 ~~Iv--it~G~t~al~~l--~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~ 196 (447)
T PLN02607 121 DRIV--LTAGATAANELL--TFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEA 196 (447)
T ss_pred HHeE--EcCChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHH
Confidence 9999 999999999998 66778999999999999999988776 5799999998854456789999999988642
Q ss_pred -CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhh------hcCCeEEEE
Q 013839 193 -PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFL------EDEHLIGCA 265 (435)
Q Consensus 193 -~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~------~~~~~~i~~ 265 (435)
..++++++++|||||||.+++++++++|+++|++|++++|+||+|..+.|++ ....++..+. +..++++++
T Consensus 197 ~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~--~~f~S~~s~~~~~~~~~~~~~v~vi 274 (447)
T PLN02607 197 ANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA--SEFVSVAEIVEARGYKGVAERVHIV 274 (447)
T ss_pred hCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCcccHHHHHhhcCCCCCcCcEEEE
Confidence 2467899999999999999999999999999999999999999999988764 1233443332 124689999
Q ss_pred ecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 013839 266 QSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRK 345 (435)
Q Consensus 266 ~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 345 (435)
+|+||.||++|+|+||++ +.+++ ++..++... .+..++.++|.+++.+|.++.+. +++++..+++++++
T Consensus 275 ~s~SK~fg~~GlRvG~iv--s~n~~----l~~~~~~~~--~~~~~s~~~q~~~~~~L~d~~~~---~~~l~~~r~~l~~~ 343 (447)
T PLN02607 275 YSLSKDLGLPGFRVGTIY--SYNDK----VVTTARRMS--SFTLVSSQTQHLLASMLSDEEFT---ENYIRTNRERLRKR 343 (447)
T ss_pred EcchhcCCCCcceEEEEE--EcCHH----HHHHHHHHh--hcCCCCHHHHHHHHHHhCCchhH---HHHHHHHHHHHHHH
Confidence 999999999999999997 33666 666666543 23457889999999999987532 25678889999999
Q ss_pred HHHHHHHHHhhCCCCCccccccCcceeEecCCCH-----------HHHHHHhhhccEEEeCCC----------cEEeccC
Q 013839 346 RTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTP-----------YQVDRLAKEFHIYMTQDG----------RISMAGV 404 (435)
Q Consensus 346 ~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~ll~~~gI~i~pgg----------Ris~~~~ 404 (435)
++.+.+.|++.|. .+.++++|+|+|+++.. ++.+++++++||.+.||. ||+|+..
T Consensus 344 ~~~~~~~L~~~gi----~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~ 419 (447)
T PLN02607 344 YEMIVQGLRRAGI----ECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANM 419 (447)
T ss_pred HHHHHHHHHhCCC----CcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccC
Confidence 9999999998874 57788999999997631 234567777899999982 9999876
Q ss_pred CCCcHHHHHHHHHHHHHhhhhhh
Q 013839 405 TTGNVNYLANAIHEVTRSEQETA 427 (435)
Q Consensus 405 ~~e~i~~~~~~l~~~l~~~~~~~ 427 (435)
+++++++++++|++++++.+.++
T Consensus 420 ~~~~l~~gl~Ri~~~l~~~~~~~ 442 (447)
T PLN02607 420 SEDTLEVALKRIHRFMDRRKTAS 442 (447)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhh
Confidence 88999999999999998766544
No 49
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-45 Score=328.35 Aligned_cols=355 Identities=13% Similarity=0.095 Sum_probs=305.1
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
+.+|.|+.|+|.-.+.+++...+.+++..++..+...+|.|+.|.+..|+++|+|+++.-...+++++|. +|.|-++|
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~--ltsGC~qA 138 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVV--LTSGCSQA 138 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceE--EeccchHH
Confidence 3789999999966666677778888888888888888999999999999999999876666668899999 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
++++ +.++.+||..|++|.|+|+.|...++..|.++.+|.+.++.+|.+|++.+++.++ .+|.+++++||+||+|
T Consensus 139 Ie~~--i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D---ENT~AivviNP~NPcG 213 (447)
T KOG0259|consen 139 IELA--ISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD---ENTVAIVVINPNNPCG 213 (447)
T ss_pred HHHH--HHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc---cCeeEEEEeCCCCCCc
Confidence 9999 7777789999999999999999999999999999999888899999999999998 7899999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.+.|++|+++|++++++||.||+|..+.|++ ....++..+.. -..+|.++|+||-|=.||||+||++. - ++
T Consensus 214 nVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~--~pfvpmg~fss-iVPVitlggisKrW~VPGWRlGWi~~-h-D~ 288 (447)
T KOG0259|consen 214 NVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD--KPFVPMGKFSS-IVPVITLGGISKRWIVPGWRLGWIAL-H-DP 288 (447)
T ss_pred ccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC--CCccchhhccc-cCceEeecccccccccCCceeeeEEE-e-cc
Confidence 99999999999999999999999999999999986 45666666633 35799999999999999999999974 3 43
Q ss_pred hHH-H--HHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc-cc
Q 013839 290 KQA-A--AIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWE-HI 365 (435)
Q Consensus 290 ~~~-~--~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~ 365 (435)
+.. . .+.+.+.+.. ....+++++.|.|+-.+|+... +++.......++.+.+.-.+.|++++. .. ..
T Consensus 289 ~gvf~~~~~~q~~~~~~-~~~~~p~TiiQ~AlP~IL~kTp-----~efF~k~~~~lk~na~l~y~~Lk~IP~---l~cp~ 359 (447)
T KOG0259|consen 289 RGVFRDTKVVQGIKNFL-DIIPGPATIIQGALPDILEKTP-----EEFFDKKLSFLKSNADLCYSRLKDIPC---LTCPV 359 (447)
T ss_pred cccccchHHHHHHHHHH-hccCCccHhHHHHhHHHHHhCh-----HHHHHHHHHHHHhhHHHHHHHHhcCCC---cccCc
Confidence 331 1 1334555544 3467899999999999998543 377888889999999999999999874 34 67
Q ss_pred ccCcceeEecCC----------CHHHHHHHhhhccEEEeCC---C-----cEEeccCCCCcHHHHHHHHHHHHHhhhhh
Q 013839 366 TNQLGMFCFSGL----------TPYQVDRLAKEFHIYMTQD---G-----RISMAGVTTGNVNYLANAIHEVTRSEQET 426 (435)
Q Consensus 366 ~~~~g~~~~~~~----------~~~~~~~ll~~~gI~i~pg---g-----Ris~~~~~~e~i~~~~~~l~~~l~~~~~~ 426 (435)
.|++.+|+|+++ +-+++++|.+|+.+.+.|| | |++++. ..+.++++.+||+++.++..++
T Consensus 360 kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~~~leea~~Rik~Fc~RH~~~ 437 (447)
T KOG0259|consen 360 KPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EEEMLEEAFSRIKEFCDRHSKE 437 (447)
T ss_pred CCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-ChHHHHHHHHHHHHHHHhhhhc
Confidence 899999999976 3578899999999999999 2 999976 8899999999999999765533
No 50
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=3.7e-45 Score=357.10 Aligned_cols=357 Identities=14% Similarity=0.107 Sum_probs=279.1
Q ss_pred cCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCC
Q 013839 29 VAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGK 108 (435)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~ 108 (435)
+...+...+.++.+... .+++|+|+.|.| +.+ .+....+.+.+.+... ..+|++..|.+++|+++++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~p-~~~---~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~ 77 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV---RTGAVNLGQGFP-DED---GPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRR 77 (387)
T ss_pred hhhcCccHHHHHHHHHh---hCCeEEccCCCC-CCC---CCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 33344444444444442 358899999997 442 2334444444444333 467999999999999999987333
Q ss_pred CCccccCC-CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCC-CCCCcChHhHH
Q 013839 109 DSDVVKEG-RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDP-DSKSLDFAALM 186 (435)
Q Consensus 109 ~~~~~~~~-~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~ 186 (435)
.+....++ +|+ +|+|+++|+.++ +.+++.+||+|+++.|+|..+...++..|.+++.+++.+. .++.+|+++++
T Consensus 78 ~g~~~~~~~~i~--~t~G~~~al~~~--~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~ 153 (387)
T PRK07777 78 YGLEYDPDTEVL--VTVGATEAIAAA--VLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALR 153 (387)
T ss_pred hCCCCCCCCcEE--EeCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHH
Confidence 22223354 688 899999999887 6777889999999999999999999999999999988433 35789999999
Q ss_pred HHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEe
Q 013839 187 DDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQ 266 (435)
Q Consensus 187 ~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 266 (435)
+.+. ++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+.+..+++++++
T Consensus 154 ~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~ 228 (387)
T PRK07777 154 AAVT---PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPGMRERTVTIS 228 (387)
T ss_pred HhcC---cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCCCcCcEEEEe
Confidence 9886 5678999999999999999999999999999999999999999999887542 2234444444456899999
Q ss_pred cccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 013839 267 SYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKR 346 (435)
Q Consensus 267 s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 346 (435)
||||.||++|+|+||+++ +++ +++.+.+.......+.+.+.|.++..++.... ++++..++.+++++
T Consensus 229 S~SK~~g~~GlRiG~~~~---~~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~ 295 (387)
T PRK07777 229 SAAKTFNVTGWKIGWACG---PAP----LIAAVRAAKQYLTYVGGAPFQPAVAHALDHED------AWVAALRDSLQAKR 295 (387)
T ss_pred echhhccCcCceeEEEec---CHH----HHHHHHHHHhhcccCCCCHHHHHHHHHHhCCc------HHHHHHHHHHHHHH
Confidence 999999999999999974 777 88878776655555677888988888887543 66788889999999
Q ss_pred HHHHHHHHhhCCCCCccccccCcceeEecCC------C-HHHHHHHhhhccEEEeCCC-------------cEEeccCCC
Q 013839 347 TTLRQNLEKLGSSLNWEHITNQLGMFCFSGL------T-PYQVDRLAKEFHIYMTQDG-------------RISMAGVTT 406 (435)
Q Consensus 347 ~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~------~-~~~~~~ll~~~gI~i~pgg-------------Ris~~~~~~ 406 (435)
+.+.+.|++++ +.+.++++++|+|+.+ + .+++..+++++||.+.||. ||+++. ++
T Consensus 296 ~~l~~~L~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~ 370 (387)
T PRK07777 296 DRLAAGLAEAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RD 370 (387)
T ss_pred HHHHHHHHhCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CH
Confidence 99999999875 5677888999999753 3 3455777677899998861 999976 78
Q ss_pred CcHHHHHHHHHHHH
Q 013839 407 GNVNYLANAIHEVT 420 (435)
Q Consensus 407 e~i~~~~~~l~~~l 420 (435)
+++++++++|+++.
T Consensus 371 ~~l~~~l~~l~~~~ 384 (387)
T PRK07777 371 DTLDEAIRRLRALR 384 (387)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998765
No 51
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.1e-45 Score=363.31 Aligned_cols=368 Identities=16% Similarity=0.181 Sum_probs=278.8
Q ss_pred CCCchhhHHHHHhcC-----CCC-CeeeeecceecCCCCCcccchHHHHHHHH-------hc-CCCCCCCCCCcccHHHH
Q 013839 33 AKDPINGVTEAFLAD-----PSP-YKINLGVGAYRDDKGRPVVLQCVREAEAK-------IA-GSEFLESISASVSTKMV 98 (435)
Q Consensus 33 ~~~~~~~~~~~~~~~-----~~~-~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~Y~~~~g~~~lr 98 (435)
+.++.+.--+++..+ .++ .+|+|+..+ +.--.....+.+++.... +. ......|++..|.++||
T Consensus 23 ~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aE--N~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR 100 (496)
T PLN02376 23 ENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAE--NQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFR 100 (496)
T ss_pred CCCchHHHHHHHhCCCCCcccCCCceEEeecch--hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHH
Confidence 334455555566532 334 789999998 221112223333332221 10 11234588899999999
Q ss_pred HHHHHhHcCCCC--ccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCCCCeeeeeecCC
Q 013839 99 EESVKLVYGKDS--DVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQIPERTYHYYDP 175 (435)
Q Consensus 99 ~~ia~~l~~~~~--~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~ 175 (435)
+++|+++....+ .++++++|+ +|+|+++|+.++ +.+++.|||.|++++|+|+.+...+. ..|++++++++..+
T Consensus 101 ~aiA~~l~~~~g~~v~v~pe~Iv--it~Ga~~al~~l--~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~ 176 (496)
T PLN02376 101 QAIAHFMGKARGGKVTFDPERVV--MSGGATGANETI--MFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS 176 (496)
T ss_pred HHHHHHHHHHhCCCCcCChhhEE--EccchHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCC
Confidence 999999954333 336689999 999999999998 77788999999999999999998777 58999999998544
Q ss_pred CCCCcChHhHHHHhhc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHH
Q 013839 176 DSKSLDFAALMDDIKN---APDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAI 252 (435)
Q Consensus 176 ~~~~~d~e~l~~~i~~---~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~ 252 (435)
+++++|++.+++++.+ ...++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++. ...++
T Consensus 177 ~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~--~~~si 254 (496)
T PLN02376 177 DNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGG--DFVSV 254 (496)
T ss_pred ccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC--CcccH
Confidence 5689999999876532 124678999999999999999999999999999999999999999999987642 23454
Q ss_pred HHhhhc-------CCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCCh
Q 013839 253 RIFLED-------EHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDP 325 (435)
Q Consensus 253 ~~~~~~-------~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 325 (435)
..+... .+++++++||||.||+||+|+||++ +.++. +.+.+++.. ....++.+.|.+++.+|.++
T Consensus 255 ~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li--~~~~~----l~~~~~~~~--~~~~vs~~~Q~a~~~~L~d~ 326 (496)
T PLN02376 255 AEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVY--SFNDS----VVSCARKMS--SFGLVSSQTQLMLASMLSDD 326 (496)
T ss_pred HHhhccccccccCCCeEEEEEeccccCCCCcceEEEEE--ECCHH----HHHHHHHHh--hcCCCCHHHHHHHHHHhCCh
Confidence 444211 2467889999999999999999996 43455 555554433 23458899999999999876
Q ss_pred hhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC------------HHHHHHHhhhccEE
Q 013839 326 NLKSLW-IDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT------------PYQVDRLAKEFHIY 392 (435)
Q Consensus 326 ~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~ll~~~gI~ 392 (435)
. | ++++++.+++++++++.+.+.|++.+ +.+.++++|+|+|+++. .++...++++.||.
T Consensus 327 ~----~~~~~l~~~r~~l~~r~~~l~~~L~~~g----i~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~ 398 (496)
T PLN02376 327 Q----FVDNFLMESSRRLGIRHKVFTTGIKKAD----IACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLN 398 (496)
T ss_pred h----HHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEE
Confidence 5 3 46678889999999999999999876 45778899999999762 12345566678999
Q ss_pred EeCCC----------cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 393 MTQDG----------RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 393 i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
+.||. ||+|+..+++.++.++++|++++.+..
T Consensus 399 v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 399 VSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred EeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence 99972 999987678999999999999986544
No 52
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=5.5e-45 Score=356.51 Aligned_cols=344 Identities=13% Similarity=0.144 Sum_probs=274.6
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg 126 (435)
.++++++|+.|.| +. ..++..++++...+.......|+++.|.++||+++++++...++.+..++ +++ +|+|+
T Consensus 27 ~~~~~i~l~~g~p-~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~--~t~G~ 100 (395)
T PRK08175 27 RGEDIIDFSMGNP-DG---PTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAI--VTIGS 100 (395)
T ss_pred cCCCeEEcCCCCC-CC---CCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEE--EccCc
Confidence 4578999999997 32 23444555555555444457799999999999999999854333334465 788 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN 206 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N 206 (435)
++++.++ +..++.|||+|++++|+|+.+...++..|++++.+++. ++ +.+.+++++++++..++++++++++|||
T Consensus 101 ~~~l~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~--~~~~~~l~~~l~~~~~~~~~v~i~~p~N 175 (395)
T PRK08175 101 KEGLAHL--MLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLV-EG--VDFFNELERAIRESYPKPKMMILGFPSN 175 (395)
T ss_pred HHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecc-cC--CCcHHHHHHHHhhccCCceEEEEeCCCC
Confidence 9999887 66678999999999999999988889999999999883 33 2357888888764434688999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
|||.+++.+++++|+++|++||+++|+||+|.++.+++. ..+++..+....+++++++||||.||+||+|+||+++
T Consensus 176 PtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-- 251 (395)
T PRK08175 176 PTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW--KAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-- 251 (395)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC--CCcchhcCCCcccCEEEEeeccccccCcchhheeeeC--
Confidence 999999999999999999999999999999999887542 2233333333346789999999999999999999964
Q ss_pred cChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
+++ +++.+.+.......+++.+.|.++..++.+.. ++++..+++++++++++.+.|+.++ +.+..
T Consensus 252 -~~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~ 316 (395)
T PRK08175 252 -NPE----LVSALARIKSYHDYGTFTPLQVAAIAALEGDQ------QCVRDIAEQYKRRRDVLVKGLHEAG----WMVEM 316 (395)
T ss_pred -CHH----HHHHHHHHHhhcccCCCcHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHHcC----CcccC
Confidence 888 88888877665556777888998888886542 6788899999999999999999886 45667
Q ss_pred cCcceeEecCCC--------HHHHHHHhhhccEEEeCC---C-------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 367 NQLGMFCFSGLT--------PYQVDRLAKEFHIYMTQD---G-------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 367 ~~~g~~~~~~~~--------~~~~~~ll~~~gI~i~pg---g-------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
+++|+|+|+.+. .+++..+++++||.+.|| + ||+++. +++.+.+++++|++++++
T Consensus 317 p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 317 PKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred CCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence 889999999652 234466777899999997 1 999974 788899999999998864
No 53
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=2.7e-45 Score=360.12 Aligned_cols=344 Identities=16% Similarity=0.156 Sum_probs=260.4
Q ss_pred hHHHHHhc-CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcC----CCCCCCCCCcccHHHHHHHHHhHcCCCCccc
Q 013839 39 GVTEAFLA-DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG----SEFLESISASVSTKMVEESVKLVYGKDSDVV 113 (435)
Q Consensus 39 ~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 113 (435)
..++.++. ..++++++|+.|+| +. ++++...+.+.+.+.. ....+|+++.|.++||+++++++...++..+
T Consensus 22 ~~~~~~~~~~~~~~~i~l~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~ 97 (409)
T PRK07590 22 RRVNAFREANPEAKIIRLGIGDV-TQ---PLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDI 97 (409)
T ss_pred HHHHHHhhhcCCCceEEecCcCC-CC---CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcC
Confidence 34444433 23568999999996 33 2333333333333321 1356799999999999999999855555556
Q ss_pred cCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCC-----------eeeeeecCCCCCCcCh
Q 013839 114 KEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIP-----------ERTYHYYDPDSKSLDF 182 (435)
Q Consensus 114 ~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~d~ 182 (435)
++++|+ +|+|+++++.++ ..++.|||+|++++|+|+.|...++..|.+ ++.+++..++++.+|+
T Consensus 98 ~~~~I~--it~Ga~~al~~l---~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~ 172 (409)
T PRK07590 98 SADEIF--ISDGAKCDTGNI---LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPEL 172 (409)
T ss_pred ChhhEE--ECCCHHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccC
Confidence 689999 999999998875 345789999999999999999999999987 8888873233344443
Q ss_pred HhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeE
Q 013839 183 AALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLI 262 (435)
Q Consensus 183 e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (435)
++ ++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+....+++
T Consensus 173 ~~---------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~v 241 (409)
T PRK07590 173 PE---------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS--LPHSIYEIEGARECA 241 (409)
T ss_pred cc---------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC--CCcchhhCCCcccce
Confidence 21 4678999999999999999999999999999999999999999999887541 123344443334679
Q ss_pred EEEecccccccccCCcccEEEEEecChhHHHHHHHH------------HHHHhhccccCCChhHHHHHHHHhCChhhHHH
Q 013839 263 GCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQ------------IQQIARAMYGSPPVHGILLVATILSDPNLKSL 330 (435)
Q Consensus 263 i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~------------l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~ 330 (435)
|+++||||++|++|+|+||+++ +++ +++. +.......+.+++.+.|.++..++.+..
T Consensus 242 i~~~SfSK~~~~pGlRiG~~i~---~~~----li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~---- 310 (409)
T PRK07590 242 IEFRSFSKTAGFTGTRCAYTVV---PKE----LKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG---- 310 (409)
T ss_pred EEEecCccccCCcCceeEEEEc---CHH----HhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc----
Confidence 9999999999999999999974 777 5541 2222223345688899999988887532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC----C-HHHHHHHhhhccEEEeCCC--------
Q 013839 331 WIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL----T-PYQVDRLAKEFHIYMTQDG-------- 397 (435)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~----~-~~~~~~ll~~~gI~i~pgg-------- 397 (435)
.+++++.++.++++++.+.+.|+.++ +.+..+.+|+|+|+.+ + .+++..+++++||.+.||.
T Consensus 311 -~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~ 385 (409)
T PRK07590 311 -KAQIKELIDYYMENAKIIREGLESAG----FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEG 385 (409)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcC----CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCC
Confidence 26778889999999999999999875 4566788999999976 3 3455777777899999872
Q ss_pred --cEEeccCCCCcHHHHHHHHHHH
Q 013839 398 --RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 398 --Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
||+++. +++++++++++|+++
T Consensus 386 ~iRi~~~~-~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 386 YFRLSAFG-SRENVLEAMERIKKA 408 (409)
T ss_pred EEEEEccC-CHHHHHHHHHHHHhh
Confidence 999755 788999999999875
No 54
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-45 Score=358.90 Aligned_cols=342 Identities=13% Similarity=0.146 Sum_probs=273.8
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
++.|+|+.|+| +. +. ++.+.++..........+|.+..|.++||+++++++....+..+++++|+ +|+|++++
T Consensus 33 ~~~i~l~~~~~-~~---~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~--~t~G~~~a 105 (391)
T PRK08361 33 ENVISLGIGEP-DF---DT-PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVI--VTAGAYEA 105 (391)
T ss_pred cCeEEcCCCCC-CC---CC-CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEE--EeCChHHH
Confidence 57899999996 32 22 34444444444322245698889999999999999843222235578998 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ +..++.+||+|++++|+|..+...++..|++++.+++.++.++.+|++++++.+. ++++++++++||||||
T Consensus 106 l~~~--~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~~~~~v~i~~p~NPtG 180 (391)
T PRK08361 106 TYLA--FESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT---KRTRMIVINYPNNPTG 180 (391)
T ss_pred HHHH--HHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc---cccEEEEEeCCCCCCC
Confidence 9888 6667889999999999999999999999999999998434467899999999987 5688999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.+++++|+++|+++++++|+||+|.++.+++. ...++... ..+++++++|+||.+|++|+|+||+++ ++
T Consensus 181 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~---~~ 253 (391)
T PRK08361 181 ATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIA---PE 253 (391)
T ss_pred cCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhcc---CH
Confidence 999999999999999999999999999999887532 12233222 236799999999999999999999974 77
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+.+.......+.+.+.|.++..+|.+.. +.+++++.+++++++++.+.+.|+.++ ++.+..+++
T Consensus 254 ~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~L~~~~---~~~~~~p~g 322 (391)
T PRK08361 254 Q----VIKDMIKLHAYIIGNVASFVQIAGIEALRSKE----SWKAVEEMRKEYNERRKLVLKRLKEMP---HIKVFEPKG 322 (391)
T ss_pred H----HHHHHHHHHhhhccCCChHHHHHHHHHhcCCc----ccHHHHHHHHHHHHHHHHHHHHHHhCC---CCeecCCCE
Confidence 7 77777776655566788899999999998753 225678899999999999999998863 256788899
Q ss_pred ceeEecCC-----CH-HHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 370 GMFCFSGL-----TP-YQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 370 g~~~~~~~-----~~-~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
|+|+|+.+ +. ++...+++++||.+.||. ||+++. +++++..++++|++++++
T Consensus 323 ~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 323 AFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE 390 (391)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 99999854 33 445666667899999861 999986 778899999999988764
No 55
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.4e-44 Score=354.73 Aligned_cols=353 Identities=13% Similarity=0.087 Sum_probs=271.8
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
.++++|+|+.|+| +..+.+.++..++.+...+. . ...|+++.|.++||+++++++.......+++++|+ +++|++
T Consensus 31 ~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~-~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~--~t~G~~ 105 (404)
T PRK09265 31 EGHKILKLNIGNP-APFGFEAPDEILRDVIRNLP-T-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIY--IGNGVS 105 (404)
T ss_pred cCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhh-c-CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEE--EeCChH
Confidence 5679999999997 32223445556665555543 2 46799999999999999999954433345688998 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++.++ +.+++.+||+|++++|+|..+...++..|++++.++...++++.+|++++++.+. ++++++++++||||
T Consensus 106 ~~l~~~--~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NP 180 (404)
T PRK09265 106 ELIVMA--MQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT---PRTKAIVIINPNNP 180 (404)
T ss_pred HHHHHH--HHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc---ccceEEEEECCCCC
Confidence 999888 6667889999999999999999999999999998887333457899999999886 57889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+. ...++++++||||.+|+||+|+||+++ ..
T Consensus 181 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~vi~~~S~SK~~~~pGlRiG~~v~-~~ 256 (404)
T PRK09265 181 TGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASLA-PDLLCVTFNGLSKAYRVAGFRVGWMVL-SG 256 (404)
T ss_pred CCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHcC-CCceEEEEecchhhccCcccceEEEEE-eC
Confidence 99999999999999999999999999999999987541 223333332 234789999999999999999999973 23
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++..+.+++.+... .....+++.++|.++..+|.+.+. + +...+.+++++++++.+.+.|++++ ++.+..+
T Consensus 257 ~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~---~-~~~~~~~~~~~~~r~~~~~~L~~~~---~~~~~~p 328 (404)
T PRK09265 257 PKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQS---I-NELILPGGRLYEQRDRAWELLNAIP---GVSCVKP 328 (404)
T ss_pred chHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchh---H-HHHHHHHHHHHHHHHHHHHHHhcCC---CCcccCC
Confidence 554333455555433 234467888999999999975421 1 1122223567778888999998763 2567889
Q ss_pred CcceeEecCCC---------HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 368 QLGMFCFSGLT---------PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 368 ~~g~~~~~~~~---------~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
++|+|+|+.++ .+++.++++++||.+.||. |++++. +++++++++++|+++++..
T Consensus 329 ~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~-~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 329 KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLP-RVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 99999998552 3456677788999999871 999964 8899999999999988643
No 56
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-44 Score=354.99 Aligned_cols=368 Identities=15% Similarity=0.145 Sum_probs=289.3
Q ss_pred ccccccCCCCCCchhhHHHHHh--cCCCCCeeeeecceecCCCCCcccchHHHHHHHH-hcCCCCCCCCCCcccHHHHHH
Q 013839 24 GWWDHVAPAAKDPINGVTEAFL--ADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAK-IAGSEFLESISASVSTKMVEE 100 (435)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~~~g~~~lr~~ 100 (435)
.+.+++...+++.+.+..+..+ ....++.++|+.|+| +. +.+ +.+.++..+ +... ...|++..|.+.||++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~---~~~-~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ 76 (393)
T PRK05764 3 KLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEP-DF---DTP-EHIKEAAIEALDDG-KTKYTPAAGIPELREA 76 (393)
T ss_pred chhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCC-CC---CCC-HHHHHHHHHHHhcC-CCCcCCCCChHHHHHH
Confidence 3556676666666544333332 123468999999996 32 333 344444443 3333 4569999999999999
Q ss_pred HHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCc
Q 013839 101 SVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSL 180 (435)
Q Consensus 101 ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 180 (435)
+++++....+..+.+++++ +++|+++|+.++ +..++.+||+|++++|+|..+...++..|++++.++...++++.+
T Consensus 77 ia~~~~~~~~~~~~~~~i~--~~~g~~~a~~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 152 (393)
T PRK05764 77 IAAKLKRDNGLDYDPSQVI--VTTGAKQALYNA--FMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKL 152 (393)
T ss_pred HHHHHHHHhCCCCCHHHEE--EeCCcHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcC
Confidence 9999843333334578888 999999999888 666788999999999999999999999999999999843446789
Q ss_pred ChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh-hhcC
Q 013839 181 DFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF-LEDE 259 (435)
Q Consensus 181 d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~ 259 (435)
|++.+++.+. ++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++. ...++... .+..
T Consensus 153 d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~ 227 (393)
T PRK05764 153 TVEQLEAAIT---PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPELR 227 (393)
T ss_pred CHHHHHHhhC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCCCc
Confidence 9999999886 5678999999999999999999999999999999999999999999887531 22233333 3445
Q ss_pred CeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 013839 260 HLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMA 339 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~ 339 (435)
+++++++||||.++++|+|+||+++ +++ +++.+.........+++.+.|.++..+|... .+++++.+
T Consensus 228 ~~~i~~~s~SK~~~~~G~RiG~i~~---~~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~ 294 (393)
T PRK05764 228 DRTITVNGFSKAYAMTGWRLGYAAG---PKE----LIKAMSKLQSHSTSNPTSIAQYAAVAALNGP------QDEVEEMR 294 (393)
T ss_pred CCEEEEecCcccccCccceeEEEec---CHH----HHHHHHHHHhhcccCCChHHHHHHHHHHcCC------hHHHHHHH
Confidence 6899999999999999999999974 888 8888887776667788999999999988732 26677888
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC----------HHHHHHHhhhccEEEeCCC--------cEEe
Q 013839 340 DRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT----------PYQVDRLAKEFHIYMTQDG--------RISM 401 (435)
Q Consensus 340 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~~ll~~~gI~i~pgg--------Ris~ 401 (435)
+.++++++.+.+.|+++. ++.+..+++|+|+|+.+. .++...+++++||.+.||. ||++
T Consensus 295 ~~~~~~~~~l~~~L~~~~---g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~ 371 (393)
T PRK05764 295 QAFEERRDLMVDGLNEIP---GLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSY 371 (393)
T ss_pred HHHHHHHHHHHHHHhhCC---CCcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEe
Confidence 999999999999998872 156677899999998542 3445677777899999872 9999
Q ss_pred ccCCCCcHHHHHHHHHHHHHhh
Q 013839 402 AGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 402 ~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
+. +++++++++++|++++++.
T Consensus 372 ~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 372 AT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred cC-CHHHHHHHHHHHHHHHHhh
Confidence 87 8899999999999988753
No 57
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.8e-44 Score=353.56 Aligned_cols=366 Identities=12% Similarity=0.100 Sum_probs=278.8
Q ss_pred chhhHHHHHhc--CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccc
Q 013839 36 PINGVTEAFLA--DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVV 113 (435)
Q Consensus 36 ~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 113 (435)
++.+....+++ ..+.++|+|+.|.|...+..+++....+.+...+.......|++..|.+++|+++++++....+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 94 (403)
T TIGR01265 15 PIRAIVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKL 94 (403)
T ss_pred HHHHHHHHHHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Confidence 34444444443 2457999999999721122233444443333334333345698999999999999999964433345
Q ss_pred cCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC
Q 013839 114 KEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP 193 (435)
Q Consensus 114 ~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~ 193 (435)
.+++++ +|+|+++|+.++ +.+++.+||+|++++|+|..+...++..|++++.+++..++++++|++.+++.+.
T Consensus 95 ~~~~ii--~t~G~t~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--- 167 (403)
T TIGR01265 95 TADDVV--LTSGCSQAIEIC--IEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD--- 167 (403)
T ss_pred CHHHEE--EecChHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC---
Confidence 578888 999999999998 6667789999999999999999999999999999887434468899999999886
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccc
Q 013839 194 DSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG 273 (435)
Q Consensus 194 ~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g 273 (435)
++++++++++||||||.+++.+++++|+++|+++|+++|+|++|.++.+++ ....++..+. ...++|+++||||.|+
T Consensus 168 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~~~~vi~~~S~SK~~~ 244 (403)
T TIGR01265 168 EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASFA-SIVPVLSLGGISKRWV 244 (403)
T ss_pred cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhhc-cCCcEEEEeecccccC
Confidence 567899999999999999999999999999999999999999999998764 1223444442 2357999999999999
Q ss_pred ccCCcccEEEEEecChhHHHH-HHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 274 LYGHRVGCLSILCVDSKQAAA-IRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQN 352 (435)
Q Consensus 274 ~~G~RvG~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 352 (435)
+||+|+||+++ ..+++.+.. +++.+.+... ...+++.+.|.++..+|.+.. ..++++.+++++++++.+.+.
T Consensus 245 ~pGlRiG~~v~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~ 317 (403)
T TIGR01265 245 VPGWRLGWIII-HDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTP-----QEFFDGKISVLKSNAELCYEE 317 (403)
T ss_pred CCcceEEEEEE-eCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhCh-----HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999974 212222222 4555555433 245688999999999986521 367888899999999999999
Q ss_pred HHhhCCCCCccccccCcceeEecCCC----------HHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHH
Q 013839 353 LEKLGSSLNWEHITNQLGMFCFSGLT----------PYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLAN 414 (435)
Q Consensus 353 l~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~ 414 (435)
|+.++ ++.+..|++|+|+|+.++ .+++..+++++||.+.||. ||+++. ++++++++++
T Consensus 318 L~~~~---~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~ 393 (403)
T TIGR01265 318 LKDIP---GLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV-PESMLEEACS 393 (403)
T ss_pred HhcCC---CceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-CHHHHHHHHH
Confidence 98763 245567889999999662 2445776778999999982 999986 7788999999
Q ss_pred HHHHHHHh
Q 013839 415 AIHEVTRS 422 (435)
Q Consensus 415 ~l~~~l~~ 422 (435)
+|++++++
T Consensus 394 ~l~~~~~~ 401 (403)
T TIGR01265 394 RIKEFCER 401 (403)
T ss_pred HHHHHHHh
Confidence 99988754
No 58
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-45 Score=362.26 Aligned_cols=344 Identities=16% Similarity=0.102 Sum_probs=262.0
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCC--C--ccccCCCeeeEecCC
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKD--S--DVVKEGRSAGVQALS 125 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~--~--~~~~~~~v~~~~t~g 125 (435)
.++|+|+.|+| +. ++ ++.+.++...+. + . +|+++.|.+++|++|++++.... . .+..+++|+ +|+|
T Consensus 100 ~~~i~l~~g~p-~~---~~-~~~v~e~~~~~~-~-~-~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~--vT~G 169 (527)
T PRK09275 100 RDAVSYVRDQL-GF---DA-DEFVYELVDGII-G-D-NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLF--AVEG 169 (527)
T ss_pred HHHHhhcCCCC-CC---CC-CHHHHHHHHHHh-c-C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEE--EeCC
Confidence 36799999997 54 33 344455666654 3 2 49999999999999999663321 1 111134788 9999
Q ss_pred chhHHHHHHHHH---HHhCCCCEEEEcCCCChhhHHHHhhCCCC--eeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEE
Q 013839 126 GTGACRLFAEFQ---RRFHPESHIYFPDPTWSNHHNIWRDAQIP--ERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLL 200 (435)
Q Consensus 126 g~~a~~~~~~~~---~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~--~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~ 200 (435)
+++|+..++..+ .+++|||+|++++|+|+.|...++..|.. ++.++...+++|.+|+++++++++ +++++++
T Consensus 170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~---~~tkai~ 246 (527)
T PRK09275 170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD---PSIKALF 246 (527)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC---CCCCEEE
Confidence 999999883211 26889999999999999999988877554 455554334568999999999877 7889999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHh--cCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCc
Q 013839 201 HPSAHNPTGVDPTEEQWREISYQFKV--KGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHR 278 (435)
Q Consensus 201 ~~~p~NPtG~~~~~~~l~~i~~~~~~--~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~R 278 (435)
++|||||||.+++.+++++|+++|++ ++++||+||+|..|.+. ..++... ..+++|+++||||.||++|||
T Consensus 247 l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~s~~~~--~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 247 LVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-----FRSLFAV--LPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred EeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-----ccCHHHh--CCCCEEEEeehhhhccCcHhH
Confidence 99999999999999999999999964 59999999999998752 1222222 347899999999999999999
Q ss_pred ccEEEEEecChhHHHHHHHHH--------------------------------HHHhhccccCCChhHHHHH-----HHH
Q 013839 279 VGCLSILCVDSKQAAAIRSQI--------------------------------QQIARAMYGSPPVHGILLV-----ATI 321 (435)
Q Consensus 279 vG~~~~~~~~~~~~~~~~~~l--------------------------------~~~~~~~~~~~~~~~q~~~-----~~~ 321 (435)
+||++ +++++..+++++.+ ++.....+.+++.+.|.++ .++
T Consensus 320 lG~i~--~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~al 397 (527)
T PRK09275 320 LGVIA--LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFAL 397 (527)
T ss_pred Hhhhh--cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 99996 43333333343333 5666677889999999873 344
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC---------------------HH
Q 013839 322 LSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT---------------------PY 380 (435)
Q Consensus 322 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~---------------------~~ 380 (435)
+...+ ++.+++++.++++++.+.+.| +. .+...+++++||+|+++. .+
T Consensus 398 l~~~~------~~~~~~~~~~~~Rr~~l~~~L---g~--~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~ 466 (527)
T PRK09275 398 LDEED------AYKKAMKDIIRRRYKALYEGL---GL--PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVD 466 (527)
T ss_pred HhCch------HHHHHHHHHHHHHHHHHHHHc---CC--CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHH
Confidence 55433 678889999999999998887 32 133457899999999652 24
Q ss_pred HHHHHhhhccEEEeCCC---------cEEeccCCCCcHHHHHHHHHHHHHhhhhh
Q 013839 381 QVDRLAKEFHIYMTQDG---------RISMAGVTTGNVNYLANAIHEVTRSEQET 426 (435)
Q Consensus 381 ~~~~ll~~~gI~i~pgg---------Ris~~~~~~e~i~~~~~~l~~~l~~~~~~ 426 (435)
++.+|+++.||.+.||. |||+++.+++++.++.++|++++++..++
T Consensus 467 f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~~ 521 (527)
T PRK09275 467 LLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYEE 521 (527)
T ss_pred HHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999982 99998778899999999999999876643
No 59
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-44 Score=353.09 Aligned_cols=341 Identities=18% Similarity=0.125 Sum_probs=271.9
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHh-cCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKI-AGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++..|+|+.|+| +. + +++.+.+++.+. .......|++..|.++||+++++++....+..+++++|+ +|+|+
T Consensus 27 ~~~~~i~l~~~~~-~~---~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~--~t~G~ 99 (386)
T PRK07550 27 ADGPLIDLSQAVP-GY---P-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVH--ITSGC 99 (386)
T ss_pred cCCCeEEeCCCCC-CC---C-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEE--EecCc
Confidence 5678999999996 22 2 234444444443 233356799999999999999999854434345578988 99999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN 206 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N 206 (435)
++++.++ +.+++.+||+|++++|+|.++...++..|++++.+++.+++++.+|++++++.++ ++++++++++|||
T Consensus 100 ~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~~~~P~N 174 (386)
T PRK07550 100 NQAFWAA--MVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT---PRTRAIALVTPNN 174 (386)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc---ccCcEEEEeCCCC
Confidence 9999888 6667889999999999999999999999999999998434567789999999987 5678888889999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
|||.+++.+++++|+++|++|+++||+||+|.++.++.. ...+.....+..+++++++||||.+|++|+|+||+++
T Consensus 175 PtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~-- 250 (386)
T PRK07550 175 PTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGG--APHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVA-- 250 (386)
T ss_pred CCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCcchhhCCCccccEEEEecchhhccCcccceEeeec--
Confidence 999999999999999999999999999999998876421 1122222223356899999999999999999999974
Q ss_pred cChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
+++ +++.+.+.......+++.++|.++..++.+. ++++++.++.++++++.+.+.|+.+.. +.+ .
T Consensus 251 -~~~----~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~-~ 315 (386)
T PRK07550 251 -SPA----RIAEIEKFMDTVAICAPRIGQIAVAWGLPNL------ADWRAGNRAEIARRRDAFRAVFARLPG---WEL-L 315 (386)
T ss_pred -CHH----HHHHHHHHHhhcccCCCcHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHHHHHHhCCC---cee-C
Confidence 777 8888887776667788999999999998753 367778888999999999999988631 333 3
Q ss_pred cCcceeEecCC-----C-HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHH
Q 013839 367 NQLGMFCFSGL-----T-PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 367 ~~~g~~~~~~~-----~-~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
+.+|+|+|+.+ + .+++..+++++||.+.||. ||+++..+++++++++++|+++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 316 ASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred CCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 56899999854 3 3455667778999999961 9999876788999999999875
No 60
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=4.8e-45 Score=360.84 Aligned_cols=330 Identities=15% Similarity=0.130 Sum_probs=264.6
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
...++|+.|.| +. +.++ .+.+++...... ...|++..|.++||+++++++...... +++|+ +|+|++++
T Consensus 85 ~~~i~L~~g~p-~~---~~~p-~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~---~~~Ii--it~G~~~a 153 (431)
T PRK15481 85 TPLHDLAGGNP-DP---QRLP-DLSRYFARLSRT-PRLYGDAPVSPELHAWAARWLRDDCPV---AFEID--LTSGAIDA 153 (431)
T ss_pred chhhhhhcCCC-Ch---hHhH-HHHHHHHHhhhh-hhhcCCcCCCHHHHHHHHHHHhhccCC---cCeEE--EecCcHHH
Confidence 46889999986 32 2222 244444443322 456999999999999999998432121 46888 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeC-CCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHP-SAHNPT 208 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~-~p~NPt 208 (435)
+.++ +.+++.|||+|++++|+|+.+...++..|++++.+++ +++ ++|++.++++++ .++++++++ +|||||
T Consensus 154 l~~~--~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~--g~~~~~l~~~~~---~~~k~i~~~p~p~NPT 225 (431)
T PRK15481 154 IERL--LCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSV-DAE--GMQPEKLERALA---QGARAVILTPRAHNPT 225 (431)
T ss_pred HHHH--HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeecc-CCC--CCCHHHHHHHHh---cCCCEEEECCCCCCCC
Confidence 9988 7778899999999999999999999999999999998 333 689999999987 456666665 999999
Q ss_pred CCCCCHHHHHHHHHHHHhc-CceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 209 GVDPTEEQWREISYQFKVK-GHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~-~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
|.+++.+++++|+++|++| +++||+||+|.++.+++. . +. +....+++++++||||+|+ +|+|+||+++
T Consensus 226 G~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~---~-~~--~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~--- 295 (431)
T PRK15481 226 GCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY---H-SV--IPQTTQRWALIRSVSKALG-PDLRLAFVAS--- 295 (431)
T ss_pred CccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC---C-CC--CcCCCCCEEEEeeeccccC-CCceeEEEeC---
Confidence 9999999999999999999 999999999999976431 1 11 1122468999999999999 9999999964
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+.......+++.++|.++..+|.++. +.+++++.++.++++++.+.+.|++.+ +.+..|
T Consensus 296 ~~~----~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~----~~~~l~~~~~~~~~~r~~~~~~L~~~~----~~~~~p 363 (431)
T PRK15481 296 DSA----TSARLRLRLNSGTQWVSHLLQDLVYACLTDPE----YQARLAQARLFYAQRRQKLARALQQYG----IAIPSP 363 (431)
T ss_pred CHH----HHHHHHHHHhccccCCCHHHHHHHHHHHhCcc----HHHHHHHHHHHHHHHHHHHHHHHHHcC----CccccC
Confidence 788 77777665544445689999999999998764 456788999999999999999999876 456678
Q ss_pred CcceeEecCCC---HHHHHHHhhhccEEEeCCC-----------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 368 QLGMFCFSGLT---PYQVDRLAKEFHIYMTQDG-----------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 368 ~~g~~~~~~~~---~~~~~~ll~~~gI~i~pgg-----------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
++|+|+|+.+. .+++..+ .++||.+.||. ||+++..++++++.++++|++++.
T Consensus 364 ~gg~f~~~~l~~~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 364 GDGLNLWLPLDTDSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred CCeEEEEEECCCCHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 99999999873 3344555 57899999861 999987788999999999998864
No 61
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.3e-44 Score=351.36 Aligned_cols=333 Identities=14% Similarity=0.126 Sum_probs=256.0
Q ss_pred hhhHHHHHhcCCCCCeeeeecceecCCC-----CC---------------------cccchHHHHHHHHhc--CCCCCCC
Q 013839 37 INGVTEAFLADPSPYKINLGVGAYRDDK-----GR---------------------PVVLQCVREAEAKIA--GSEFLES 88 (435)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~-----~~---------------------~~~~~~~~~~~~~~~--~~~~~~Y 88 (435)
+....++.+ ..+.++|+|++|+| +.. .+ ..+++.+.++...+. .+...+|
T Consensus 26 ~~~~a~~~~-~~g~~vi~l~iG~P-d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y 103 (407)
T PLN02368 26 LYLRASELQ-KEGKKIIFTNVGNP-HALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAY 103 (407)
T ss_pred HHHHHHHHH-HHhhhhhcccCCCh-hHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCC
Confidence 334444443 25679999999998 311 01 125566676666653 2335679
Q ss_pred CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHh-CCCCEEEEcCCCChhhHHHHhhCCCCe
Q 013839 89 ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRF-HPESHIYFPDPTWSNHHNIWRDAQIPE 167 (435)
Q Consensus 89 ~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 167 (435)
+++.|.++||++|++++...++..+++++|+ +|+|+++++.++ +.+++ ++||+|++++|+|+.|...++..|+++
T Consensus 104 ~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~--it~Ga~~al~~~--~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~ 179 (407)
T PLN02368 104 SDSRGLPGVRKEVAEFIERRDGYPSDPELIF--LTDGASKGVMQI--LNAVIRGEKDGVLVPVPQYPLYSATISLLGGTL 179 (407)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCChhhEE--EcccHHHHHHHH--HHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEE
Confidence 9999999999999999965444456688999 999999999888 66666 699999999999999999999999999
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCC
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGD 244 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~ 244 (435)
+.+++..+++|++|++.+++.+++. ..+++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.|++
T Consensus 180 v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~ 259 (407)
T PLN02368 180 VPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQD 259 (407)
T ss_pred EEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCC
Confidence 9999854556899999999998631 1268999999999999999999999999999999999999999999999864
Q ss_pred CcccHHHHHHhh-h------cCCeEEEEecccccc-cccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHH
Q 013839 245 LDKDAQAIRIFL-E------DEHLIGCAQSYAKSM-GLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGIL 316 (435)
Q Consensus 245 ~~~~~~~~~~~~-~------~~~~~i~~~s~SK~~-g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~ 316 (435)
. ....++..+. + ..+++|+++||||.| +++|||+||+++...+++ +++.+.+... ...+++.++|.
T Consensus 260 ~-~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~----li~~~~~~~~-~~~~~~~~~Q~ 333 (407)
T PLN02368 260 E-RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK----TVEEIYKVAS-IALSPNVSGQI 333 (407)
T ss_pred C-CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHH----HHHHHHHHhc-ccCCCCcHHHH
Confidence 2 1122333221 1 134899999999998 899999999962113777 8888887643 34578999999
Q ss_pred HHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC--CHHHHHH
Q 013839 317 LVATILSDPN----LKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL--TPYQVDR 384 (435)
Q Consensus 317 ~~~~~l~~~~----l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~ 384 (435)
++..+|..+. ..+.|.++.+++++.|+++++.+.+.|++++. +.+..|+|+||+|+++ ....+++
T Consensus 334 aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g---~~~~~P~Gafy~~~~i~lp~~~~~~ 404 (407)
T PLN02368 334 FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKN---VVCNFTEGAMYSFPQIKLPPKAIEA 404 (407)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---eEeCCCCeeeEeccCCCCCHHHHHH
Confidence 9999997542 11123455567889999999999999998742 6688899999999865 4444443
No 62
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=5.1e-44 Score=350.23 Aligned_cols=350 Identities=15% Similarity=0.132 Sum_probs=272.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
.+.++|+|+.|.|... ..++ ++.+.+++..........|++..|.++||+++++++...++..+++++|. +|+|++
T Consensus 28 ~~~~~i~l~~g~p~~~-~~~p-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~--it~G~~ 103 (398)
T PRK08363 28 KGIKVIRLNIGDPVKF-DFQP-PEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVR--VTAAVT 103 (398)
T ss_pred cCCCeEEEeCCCCCcC-CCCC-CHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEE--EeCCHH
Confidence 5578999999997311 2233 34444444443322245699899999999999999854444446688998 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+|+.++ +.+++.+||+|++++|+|..+...++..|.+++.++..+++++.+|++++++.+. ++++++++++||||
T Consensus 104 ~al~~~--~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NP 178 (398)
T PRK08363 104 EALQLI--FGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT---EKTKAIAVINPNNP 178 (398)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC---cceEEEEEECCCCC
Confidence 999988 6777899999999999999999999999998888833245667899999999886 56789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|+++++++|+||+|.++.+++ ...++..+. ...++++++||||.|+++|+|+||+++ .+
T Consensus 179 tG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~---~~~~~~~~~-~~~~vi~~~SfSK~~~~~GlRiG~~~~-~~ 253 (398)
T PRK08363 179 TGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG---KHVSPGSLT-KDVPVIVMNGLSKVYFATGWRLGYIYF-VD 253 (398)
T ss_pred CCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC---cccCHHHcC-cCCcEEEEecchhccCCccceEEEEEE-eC
Confidence 9999999999999999999999999999999988753 122333332 245799999999999999999999973 23
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++..+.+.+.+..... ...+++.++|.++..+|.+.. +++++.+++++++++.+.+.|++++ ++.+..+
T Consensus 254 ~~~~~~~l~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~------~~l~~~~~~~~~~~~~l~~~L~~~~---~~~~~~p 323 (398)
T PRK08363 254 PEGKLAEVREAIDKLAR-IRLCPNTPAQFAAIAGLTGPM------DYLEEYMKKLKERRDYIYKRLNEIP---GISTTKP 323 (398)
T ss_pred cHHHHHHHHHHHHHHhc-ccccCChHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHhcCC---CCEecCC
Confidence 56633334443333221 234688899999999887532 6788889999999999999998763 2567788
Q ss_pred CcceeEecCC-------CHHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 368 QLGMFCFSGL-------TPYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 368 ~~g~~~~~~~-------~~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
++|+|+|+.+ +.+++..+++++||.+.||. ||+++. +++++++++++|++++++
T Consensus 324 ~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 324 QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFMRE 394 (398)
T ss_pred CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 9999999643 24456777788999999872 999975 788899999999998765
No 63
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-44 Score=347.85 Aligned_cols=340 Identities=12% Similarity=0.078 Sum_probs=260.9
Q ss_pred hHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCe
Q 013839 39 GVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRS 118 (435)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v 118 (435)
.+..+.....+.++|+|+.|+| +. +.+ +.+.+++...... ...|+++.|.++||+++++++...++.++++++|
T Consensus 13 ~~~~~~~~~~~~~~i~l~~~~p-~~---~~~-~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I 86 (374)
T PRK05839 13 ELLKEITPNKEYKGLDLTIGEP-QF---ETP-KFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELKENEL 86 (374)
T ss_pred HHHHHhhhcCCCCeEEcCCCCC-CC---CCC-HHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceE
Confidence 4444443322559999999996 32 233 4445444443333 5679999999999999999985444444668999
Q ss_pred eeEecCCchhHHHHHHHHHHHh--CCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCc
Q 013839 119 AGVQALSGTGACRLFAEFQRRF--HPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 119 ~~~~t~gg~~a~~~~~~~~~~~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
+ +|+|+++++.++ +..++ .+||.|+++.|+|+.|...++..|++++.+++..++++.+|+++. .+ +++
T Consensus 87 ~--it~G~~~al~~~--~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~----~~~ 156 (374)
T PRK05839 87 I--PTFGTREVLFNF--PQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--EL----QEV 156 (374)
T ss_pred E--EecCcHHHHHHH--HHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hh----ccc
Confidence 9 999999998877 44443 478999999999999999999999999999984344566665543 22 357
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh-----hhcCCeEEEEeccccc
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF-----LEDEHLIGCAQSYAKS 271 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~s~SK~ 271 (435)
++++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++ ..+++... ....+++|+++||||.
T Consensus 157 k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~~~~~~~~vi~~~SfSK~ 233 (374)
T PRK05839 157 DLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILVGNESFKNVLVINSISKR 233 (374)
T ss_pred cEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhcccCccccCcEEEEeccccc
Confidence 899999999999999999999999999999999999999999986542 12222221 1233689999999999
Q ss_pred ccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQ 351 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 351 (435)
|+++|+|+||+++ +++ +++++.+.......+.+.+.|.++..++.+. +++++.+++++++++.+.+
T Consensus 234 ~~~~GlRiG~ii~---~~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~ 299 (374)
T PRK05839 234 SSAPGLRSGFIAG---DAS----ILKKYKAYRTYLGCASPLPLQKAAAVAWLDD-------EHAEFFRNIYAKNLKLARE 299 (374)
T ss_pred cCCccceeEEEec---CHH----HHHHHHHHHhhcCCCCChHHHHHHHHHhccc-------hHHHHHHHHHHHHHHHHHH
Confidence 9999999999974 788 8888877665555678888999988777653 6677788889999888776
Q ss_pred HHHhhCCCCCccccccCcceeEecCC--CHHHHHHHhhhccEEEeCC----------C--cEEeccCCCCcHHHHHHHHH
Q 013839 352 NLEKLGSSLNWEHITNQLGMFCFSGL--TPYQVDRLAKEFHIYMTQD----------G--RISMAGVTTGNVNYLANAIH 417 (435)
Q Consensus 352 ~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~ll~~~gI~i~pg----------g--Ris~~~~~~e~i~~~~~~l~ 417 (435)
.| + +. .+++|+|+|+.+ +.+++..+++++||.+.|| + ||+++. +++++.+++++|+
T Consensus 300 ~l---~----~~--~p~gg~fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~ 369 (374)
T PRK05839 300 IL---G----IT--IPPATFYVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIK 369 (374)
T ss_pred hc---C----CC--CCCeeEEEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence 54 3 22 578999999987 3455677766799999985 1 999976 7889999999999
Q ss_pred HHHH
Q 013839 418 EVTR 421 (435)
Q Consensus 418 ~~l~ 421 (435)
++++
T Consensus 370 ~~l~ 373 (374)
T PRK05839 370 TYLE 373 (374)
T ss_pred HHhh
Confidence 8874
No 64
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=5.2e-44 Score=344.18 Aligned_cols=329 Identities=16% Similarity=0.129 Sum_probs=261.8
Q ss_pred eeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCchhHH
Q 013839 52 KINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSGTGAC 130 (435)
Q Consensus 52 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg~~a~ 130 (435)
+++|+.|.| +. +.+ +.+.+++.+.... ..+|+++.|.++||+++++++...++.+++++ +|+ +|+|+++++
T Consensus 2 ~~~~~~g~p-~~---~~~-~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Ii--it~Gs~~ai 73 (350)
T TIGR03537 2 LFDFGTGDP-KE---PTP-PFIRKALIDAVPE-VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVL--PSAGSKEAI 73 (350)
T ss_pred eEeccCCCC-CC---CCC-HHHHHHHHHHHhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEE--EcCChHHHH
Confidence 689999996 32 333 3444444444333 56799999999999999999854433344566 898 999999999
Q ss_pred HHHHHHHHHhCCC---CEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 131 RLFAEFQRRFHPE---SHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 131 ~~~~~~~~~~~~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
.++ +..++++| |+|++++|+|+.+...++..|++++.+++.+++++.+|++++++++. ++++++++++||||
T Consensus 74 ~~~--~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NP 148 (350)
T TIGR03537 74 FHF--PLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL---EETKIVWINYPHNP 148 (350)
T ss_pred HHH--HHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh---hccEEEEEeCCCCC
Confidence 888 66677877 69999999999999999999999999998434567899999999887 57899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|++|++++|+||+|.++.+++. ..++... ..+++++++|+||.+|++|+|+||+++
T Consensus 149 tG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~--- 220 (350)
T TIGR03537 149 TGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP---PHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAG--- 220 (350)
T ss_pred cCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC---CCchhhc--CcCCEEEEeecccccCCccccceeeec---
Confidence 99999999999999999999999999999998876531 1222222 246899999999999999999999963
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.++........+.+.+.|.++..++.+. +++++.+++++++++.+.+.|+..+ +.+..+
T Consensus 221 ~~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~r~~l~~~~~~~~~~l~~~g----~~~~~~ 285 (350)
T TIGR03537 221 DEK----LISFLRKLRANFGVASPDFVQAAAKAAWSDD-------NHVLERRKIFKRKRDLFIEFFNKVG----LEYLYP 285 (350)
T ss_pred CHH----HHHHHHHHHHhhccCCCHHHHHHHHHHhCCc-------HHHHHHHHHHHHHHHHHHHHHHHCC----CcccCC
Confidence 787 7777877665555566667888887777653 5567788899999999999998876 456788
Q ss_pred CcceeEecCC----CHH-HHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHH
Q 013839 368 QLGMFCFSGL----TPY-QVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHE 418 (435)
Q Consensus 368 ~~g~~~~~~~----~~~-~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~ 418 (435)
++|+|+|+.+ +.+ +++.+ .++||.+.||. ||+++. +++++++++++|++
T Consensus 286 ~g~~~~~~~~~~~~~~~~l~~~L-~~~gv~v~~g~~f~~~~~~~~Ri~~~~-~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 286 DATFYLWVKVPSGIDAKDYALRL-LENGIVVAPGENFGSGEEGYVRVALVP-TLEECEEALRLWER 349 (350)
T ss_pred CeEEEEEEECCCCCCHHHHHHHH-HHCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHhc
Confidence 8999999865 333 44555 45899999861 999974 78889999988865
No 65
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=6.9e-44 Score=350.94 Aligned_cols=341 Identities=15% Similarity=0.088 Sum_probs=258.1
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCC--CccccCC--CeeeEecCC
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKD--SDVVKEG--RSAGVQALS 125 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~--~~~~~~~--~v~~~~t~g 125 (435)
+++|+|+.|+| +. + +++.+.++...+. + . +|+++.|.+++++++++.+.... .....++ +|+ +|.|
T Consensus 94 ~~~i~l~~g~p-~~---~-~~~~~~~~~~~~~-~-~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~--it~G 163 (521)
T TIGR03801 94 RDIISYVIDQL-GF---D-PDAFLYEMCDGII-G-D-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLF--AVEG 163 (521)
T ss_pred HHHHhhcCCCC-CC---C-CCHHHHHHHHHhh-c-C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEE--EeCC
Confidence 46799999997 44 3 3466666666653 2 2 49888888899988886543321 1111233 788 9999
Q ss_pred chhHHHHHHHHHH-----HhCCCCEEEEcCCCChhhHHHHhhC--CCCeeeeeecCCCC-----CCcChHhHHHHhhcCC
Q 013839 126 GTGACRLFAEFQR-----RFHPESHIYFPDPTWSNHHNIWRDA--QIPERTYHYYDPDS-----KSLDFAALMDDIKNAP 193 (435)
Q Consensus 126 g~~a~~~~~~~~~-----~~~~gd~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~-----~~~d~e~l~~~i~~~~ 193 (435)
+++|+..+ +.+ ++.|||+|++++|+|+.|...++.. |++++.++...+++ |.+|++++++++.
T Consensus 164 at~al~~~--~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~--- 238 (521)
T TIGR03801 164 GTAAMCYI--FDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD--- 238 (521)
T ss_pred HHHHHHHH--HHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC---
Confidence 99999888 443 6889999999999999999987765 67777777632222 8899999998776
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccc
Q 013839 194 DSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVK--GHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKS 271 (435)
Q Consensus 194 ~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 271 (435)
+++++++++|||||||.+++.+++++|+++|++| +++||+||+|..|.+. ..++... ..+++|+++||||.
T Consensus 239 ~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~sl~~~--~~~~vI~v~SfSK~ 311 (521)
T TIGR03801 239 PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-----FRSLFAE--LPYNTIGVYSFSKY 311 (521)
T ss_pred CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-----ccchhhh--CCCCEEEEEcchhh
Confidence 6889999999999999999999999999999987 9999999999988752 1233222 34689999999999
Q ss_pred ccccCCcccEEEEEecChhHHHHHHH--------------------------------HHHHHhhccccCCChhHHH---
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRS--------------------------------QIQQIARAMYGSPPVHGIL--- 316 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~--------------------------------~l~~~~~~~~~~~~~~~q~--- 316 (435)
||++|||+||+++ .+++..+++++ ..++.....+.+.+.+.|.
T Consensus 312 fg~~G~RlG~i~~--~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~a 389 (521)
T TIGR03801 312 FGATGWRLGTIAL--HKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMA 389 (521)
T ss_pred ccCchhhhhhhhc--CchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHH
Confidence 9999999999963 33333333332 2245555667778888887
Q ss_pred --HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC----------------
Q 013839 317 --LVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT---------------- 378 (435)
Q Consensus 317 --~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~---------------- 378 (435)
++.+++...+ .+.++.++.++++++.+.+.| |. .+...+++++||+|+++.
T Consensus 390 l~a~~all~~~~------~y~~~~~~~~~~R~~~l~~~L---g~--~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~ 458 (521)
T TIGR03801 390 LFSLFALMDKEN------AYKAETKDICRRREKLLFRGL---GL--PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLK 458 (521)
T ss_pred HHHHHHHhccch------hHHHHHHHHHHHHHHHHHHhc---CC--CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHh
Confidence 3344555432 678888999999999998888 32 133467889999999652
Q ss_pred -----HHHHHHHhhhccEEEeCCC---------cEEeccCCCCcHHHHHHHHHHHHHhhhh
Q 013839 379 -----PYQVDRLAKEFHIYMTQDG---------RISMAGVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 379 -----~~~~~~ll~~~gI~i~pgg---------Ris~~~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
.+++.+|+++.||.+.||. |+|+++.+++++.++.++|++++++..+
T Consensus 459 ~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 459 KNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred ccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2466889999999999982 9999877889999999999999976553
No 66
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-43 Score=344.33 Aligned_cols=343 Identities=17% Similarity=0.159 Sum_probs=270.4
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchh
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTG 128 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~ 128 (435)
+.++++|+.|.| +. +.+ +.+.+++...... ...|++..|.+++|+++++++. ..+..+++++|. +|+|+++
T Consensus 29 ~~~~i~l~~~~~-~~---~~~-~~~~~a~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~i~--~t~G~~~ 99 (397)
T PRK07568 29 GIKVYHLNIGQP-DI---KTP-EVFFEAIKNYDEE-VLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEIL--ITNGGSE 99 (397)
T ss_pred CCCEEEecCCCC-CC---CCC-HHHHHHHHHHhcC-CcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcceEE--EcCChHH
Confidence 457999999996 32 223 3444444444332 5679999999999999999985 333345578988 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCC-cChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKS-LDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~-~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
++.++ +..++.+||+|++++|+|..+...++..|++++.+++.+++++. .+++++++.+. ++++++++++||||
T Consensus 100 al~~~--~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~---~~~~~v~i~~p~NP 174 (397)
T PRK07568 100 AILFA--MMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT---PKTKAILISNPGNP 174 (397)
T ss_pred HHHHH--HHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC---ccceEEEEECCCCC
Confidence 99988 66668899999999999999999899999999999873233344 35789988886 57889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|+++++++|+|++|.++.+++. ...++..+.+..+++++++||||.+|++|+|+||++ ++
T Consensus 175 tG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~--~~ 250 (397)
T PRK07568 175 TGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL--KYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI--SK 250 (397)
T ss_pred CCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC--CccChhhcCCCcCCEEEEecchhhccCCCcceEEEe--cC
Confidence 99999999999999999999999999999999987641 233444444445789999999999999999999996 43
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+.... ..+++.+.|.++..+|.... +++++.++.++++++.+.+.|++++. +.+..+
T Consensus 251 ~~~----~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~p 316 (397)
T PRK07568 251 NKE----LIAAAMKLCQA-RLSPPTLEQIGAAALLDTPE------SYFDEVREEYKKRRDILYEELNKIPG---VVCEKP 316 (397)
T ss_pred CHH----HHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCH------HHHHHHHHHHHHHHHHHHHHHhcCCC---ceecCC
Confidence 567 66666554332 35788999999999997643 67888899999999999999988742 556778
Q ss_pred CcceeEecCC---CH-HHHHHHhhh-----ccEEEeCC---------C----cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 368 QLGMFCFSGL---TP-YQVDRLAKE-----FHIYMTQD---------G----RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 368 ~~g~~~~~~~---~~-~~~~~ll~~-----~gI~i~pg---------g----Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
++|+|+|+.+ +. ++...++++ +||.+.|| + ||+|+. +++++++++++|++++++..
T Consensus 317 ~g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 317 KGAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred CcceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHhh
Confidence 9999999876 23 445666553 69999985 1 999975 78999999999999887643
No 67
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=3.5e-43 Score=340.40 Aligned_cols=345 Identities=15% Similarity=0.145 Sum_probs=264.3
Q ss_pred cccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHh
Q 013839 25 WWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKL 104 (435)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 104 (435)
+.++++..+...+..+.....+ .+.++|+|+.|+| +. +. ++.+.+++..... ..+|+++.|.+++|++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~p-~~---~~-~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~ 74 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAA-HPDGIVDLSVGTP-VD---PV-PPVIQEALAAAAD--APGYPTTAGTPELREAIVGW 74 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHh-cCCCEEEcCCCCC-CC---CC-CHHHHHHHHHHHh--hCCCCCccCCHHHHHHHHHH
Confidence 4566666666656555444433 4467899999996 32 22 3444444444332 34699999999999999999
Q ss_pred HcCCCCcc-ccCCCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcCh
Q 013839 105 VYGKDSDV-VKEGRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDF 182 (435)
Q Consensus 105 l~~~~~~~-~~~~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 182 (435)
+....+.+ +++++|+ +|+|+++++.++ +..+ +.+||+|++++|+|+.+...++..|++++.++. +
T Consensus 75 l~~~~~~~~~~~~~I~--it~G~~~~i~~~--~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~ 141 (364)
T PRK07865 75 LARRRGVTGLDPAAVL--PVIGSKELVAWL--PTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS---------L 141 (364)
T ss_pred HHHHcCCCCCCcccEE--EccChHHHHHHH--HHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------h
Confidence 95443333 5588999 999999999887 4445 689999999999999999999999998887742 2
Q ss_pred HhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHH-h-hhcCC
Q 013839 183 AALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRI-F-LEDEH 260 (435)
Q Consensus 183 e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~-~-~~~~~ 260 (435)
+++.. .+++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ....+.. . ....+
T Consensus 142 ~~l~~------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~ 213 (364)
T PRK07865 142 TELGP------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE--PVSILDPRVCGGDHT 213 (364)
T ss_pred hhCCc------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC--CCccccccccCCccc
Confidence 22211 4578999999999999999999999999999999999999999999887531 1111111 0 11246
Q ss_pred eEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 013839 261 LIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMAD 340 (435)
Q Consensus 261 ~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~ 340 (435)
++++++||||.++++|+|+||+++ +++ +++.++........+++.+.|.++..+|.+. ++.++.++
T Consensus 214 ~~i~~~S~SK~~~~~GlRiG~i~~---~~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~ 279 (364)
T PRK07865 214 GLLAVHSLSKQSNLAGYRAGFVAG---DPA----LVAELLEVRKHAGMMVPAPVQAAMVAALGDD-------AHVREQRE 279 (364)
T ss_pred eEEEEeechhccCCCceeeEEEec---CHH----HHHHHHHHHHhcCCCcCHHHHHHHHHHhCCH-------HHHHHHHH
Confidence 899999999999999999999963 888 8888877665555678899999999999763 56778888
Q ss_pred HHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC--CHHHHHHHhhhccEEEeCCC----------cEEeccCCCCc
Q 013839 341 RIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL--TPYQVDRLAKEFHIYMTQDG----------RISMAGVTTGN 408 (435)
Q Consensus 341 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~ 408 (435)
.++++++.+.+.|++.| +.+..+++|+|+|+.+ +...+.+.++++||.+.||. ||+++. ++++
T Consensus 280 ~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~ 354 (364)
T PRK07865 280 RYARRRAVLRPALEAAG----FRVDHSEAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA-TDER 354 (364)
T ss_pred HHHHHHHHHHHHHHHcC----CcccCCCccEEEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC-CHHH
Confidence 99999999999999876 4566788999999976 33444445577999999861 999977 7889
Q ss_pred HHHHHHHHH
Q 013839 409 VNYLANAIH 417 (435)
Q Consensus 409 i~~~~~~l~ 417 (435)
+++++++|+
T Consensus 355 ~~~~~~~l~ 363 (364)
T PRK07865 355 IAAAVERLA 363 (364)
T ss_pred HHHHHHHhh
Confidence 999998875
No 68
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=5.2e-44 Score=346.68 Aligned_cols=344 Identities=22% Similarity=0.262 Sum_probs=275.7
Q ss_pred CeeeeecceecCCCCCcccchHHHHHHH-HhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCchh
Q 013839 51 YKINLGVGAYRDDKGRPVVLQCVREAEA-KIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSGTG 128 (435)
Q Consensus 51 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg~~ 128 (435)
++|+|+.|.+......+.++..++++.+ .........|+++.|.++||+++++++...++.+.+++ +++ +++|+.+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~--~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANIL--VTSGAQA 79 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEE--EESHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEE--Eeccccc
Confidence 6899999997444344556666666655 33334477899999999999999999964444445566 777 7777777
Q ss_pred HHHHHHHHHHH-hCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC-C--CcEEEEeCCC
Q 013839 129 ACRLFAEFQRR-FHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP-D--SSFFLLHPSA 204 (435)
Q Consensus 129 a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~-~--~~~~v~~~~p 204 (435)
++.++ +..+ ..+||+|++++|+|+.+...++..|++++.+++..++++.+|+++|++.+++.+ + +++++++++|
T Consensus 80 ~~~~~--~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p 157 (363)
T PF00155_consen 80 ALFLL--LRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNP 157 (363)
T ss_dssp HHHHH--HHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESS
T ss_pred chhhh--hhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccc
Confidence 77666 4444 569999999999999999999999999999998656778999999999998531 1 4689999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 205 HNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 205 ~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
|||||.+++.+++++|+++|++|++++|+||+|.++.+++. +..+.....+...++++++|+||.||++|+|+||+++
T Consensus 158 ~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~ 235 (363)
T PF00155_consen 158 NNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP--DFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA 235 (363)
T ss_dssp BTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS--HTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE
T ss_pred ccccccccccccccchhhhhcccccceeeeeceeccccCCC--ccCcccccccccccceeeeeccccccccccccccccc
Confidence 99999999999999999999999999999999999998752 3334333345555699999999999999999999974
Q ss_pred EecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc
Q 013839 285 LCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEH 364 (435)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 364 (435)
+++ +++.+++....... +.+.|.++..++.+... ..+++++.+++++++++.+.+.|++.+ +.+
T Consensus 236 ---~~~----~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~---~~~~~~~~~~~l~~~~~~l~~~L~~~~----~~~ 299 (363)
T PF00155_consen 236 ---PPE----LIERLRRFQRSGLS--SSPMQAAAAAALSDPEL---VEKWLEELRERLRENRDLLREALEEIG----ITV 299 (363)
T ss_dssp ---EHH----HHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHTT----SEE
T ss_pred ---hhh----hhhhhhhccccccc--cchhhHHHHHhhhcccc---cccccccchhhHHHHHHHHHHHHHHhh----hhe
Confidence 788 88888887654333 88889888888876642 223788999999999999999999886 678
Q ss_pred cccCcceeEecCCCH----HHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHH
Q 013839 365 ITNQLGMFCFSGLTP----YQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAI 416 (435)
Q Consensus 365 ~~~~~g~~~~~~~~~----~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l 416 (435)
..+++|+|.|+.++. ++.+.|+++.||.+.||. |++++..+++++++++++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 300 LPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred eeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 888899999997753 456777776699999972 9999556899999999986
No 69
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=4.6e-43 Score=343.59 Aligned_cols=346 Identities=16% Similarity=0.148 Sum_probs=254.9
Q ss_pred hHHHHHhc-CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcC----CCCCCCCCCcccHHHHHHHHHhHcCCCCccc
Q 013839 39 GVTEAFLA-DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG----SEFLESISASVSTKMVEESVKLVYGKDSDVV 113 (435)
Q Consensus 39 ~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 113 (435)
.....+.. .+++++|+|+.|+| +. ++++.+.+.+...+.. ....+|.|..|.++||+++++++++.. +
T Consensus 21 ~~~~~~~~~~~~~~~i~l~~~~~-~~---~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~---~ 93 (402)
T TIGR03542 21 RRVNEFRKKHPSADIIRLGIGDT-TQ---PLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGR---I 93 (402)
T ss_pred HHHHHHHhccCCCCeEEcCCCCC-CC---CCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcC---C
Confidence 34444432 24578999999996 22 2333333322222221 123569899999999999999874433 4
Q ss_pred cCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCC-----------CeeeeeecCCCCCCcCh
Q 013839 114 KEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQI-----------PERTYHYYDPDSKSLDF 182 (435)
Q Consensus 114 ~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~-----------~~~~v~~~~~~~~~~d~ 182 (435)
++++|+ +|+|+++++.++ ..++.+||+|++++|+|..|...++..|+ +++.+++.+++++.+|+
T Consensus 94 ~~d~I~--it~Ga~~al~~l---~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 168 (402)
T TIGR03542 94 DPEEIF--ISDGAKCDVFRL---QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDL 168 (402)
T ss_pred CHHHEE--ECCCcHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCc
Confidence 478999 999999998765 34568999999999999999999999999 88888873233444443
Q ss_pred HhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeE
Q 013839 183 AALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLI 262 (435)
Q Consensus 183 e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (435)
+. . .+++++++++||||||.+++.+++++|+++|++|+++||+||+|.+|.+++. ...++..+....+++
T Consensus 169 ~~-----~---~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~v 238 (402)
T TIGR03542 169 PE-----E---PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS--LPHSIFEIPGAKECA 238 (402)
T ss_pred cc-----c---CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC--CCcchhhCCCCcccE
Confidence 21 1 4678999999999999999999999999999999999999999999987531 122333333334689
Q ss_pred EEEecccccccccCCcccEEEEEecChhHH----HHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 013839 263 GCAQSYAKSMGLYGHRVGCLSILCVDSKQA----AAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIM 338 (435)
Q Consensus 263 i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~ 338 (435)
|+++||||.||+||+|+||+++ +++.. ..+...+.........+++.++|.++..++.+.. + ++..+.
T Consensus 239 i~~~SfSK~~g~pGlRiG~~i~---~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~----~-~~~~~~ 310 (402)
T TIGR03542 239 IEFRSFSKTAGFTGVRLGWTVV---PKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEG----L-QPILEA 310 (402)
T ss_pred EEEecCccccCCCCcceEEEEe---cHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcc----h-hHHHHH
Confidence 9999999999999999999974 76621 0111333332223345688899999888887643 1 345566
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC----C-HHHHHHHhhhccEEEeCCC----------cEEecc
Q 013839 339 ADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL----T-PYQVDRLAKEFHIYMTQDG----------RISMAG 403 (435)
Q Consensus 339 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~----~-~~~~~~ll~~~gI~i~pgg----------Ris~~~ 403 (435)
++.++++++.+.+.|++.+ +.+..+.+|+|+|+.+ + .+++..+++++||.+.||. ||+++.
T Consensus 311 ~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~ 386 (402)
T TIGR03542 311 ISYYMENARILRKALEAAG----FKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG 386 (402)
T ss_pred HHHHHHHHHHHHHHHHhcC----ceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC
Confidence 7889999999999998875 4566777899999976 3 3456777777899999971 999876
Q ss_pred CCCCcHHHHHHHHHHH
Q 013839 404 VTTGNVNYLANAIHEV 419 (435)
Q Consensus 404 ~~~e~i~~~~~~l~~~ 419 (435)
+++++++++++|+++
T Consensus 387 -~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 387 -KRENIVEACERIKEA 401 (402)
T ss_pred -CHHHHHHHHHHHHhh
Confidence 889999999999875
No 70
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-42 Score=333.21 Aligned_cols=333 Identities=14% Similarity=0.118 Sum_probs=252.9
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCC-CCCCCCCCcccHHHHHHHHHhHcCCC--CccccCCCeeeEecCCc
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS-EFLESISASVSTKMVEESVKLVYGKD--SDVVKEGRSAGVQALSG 126 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~--~~~~~~~~v~~~~t~gg 126 (435)
+..++|+.|+| +. ++++...+.+.+.+..+ ....|++ .|.++||++|++++.... +..+++++|+ +|+|+
T Consensus 28 ~~~~~l~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~--it~Ga 100 (374)
T PRK02610 28 IQLDRLDTNEF-PY---DLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANIS--VGNGS 100 (374)
T ss_pred cceeEecCCCC-CC---CCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEE--EcCCh
Confidence 45899999995 22 44444544444444432 1345855 799999999999995443 2345688999 99999
Q ss_pred hhHHHHHHHHHHHhCCCC-EEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC-CCCcEEEEeCCC
Q 013839 127 TGACRLFAEFQRRFHPES-HIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA-PDSSFFLLHPSA 204 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd-~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~v~~~~p 204 (435)
++++.++ +.+++.+|| +|++++|+|..|...++..|++++.+++ +++++++|++++++++.+. ..+++++++++|
T Consensus 101 ~~al~~~--~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P 177 (374)
T PRK02610 101 DELIRSL--LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGR-DPETFEIDLAAAQSAIEQTQNPPVRVVFVVHP 177 (374)
T ss_pred HHHHHHH--HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecC-CcccCCCCHHHHHHHHHhhcCCCceEEEEeCC
Confidence 9999877 566677886 8999999999999999999999999987 4556899999999988631 136899999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 205 HNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 205 ~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
|||||.+++.++++++.++| ++++||+||+|.+|.+.. .+..+ ...+++|+++||||.+|++|+|+||+++
T Consensus 178 ~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~------~~~~~-~~~~~~ivi~SfSK~~g~~GlRiG~~v~ 248 (374)
T PRK02610 178 NSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT------LVGEL-AQHPNWVILRTFSKAFRLAAHRVGYAIG 248 (374)
T ss_pred CCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCccc------hHHHH-hcCCCEEEEEecchhccCcccceeeeec
Confidence 99999999999999999876 489999999999886421 12222 2235788999999999999999999974
Q ss_pred EecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc
Q 013839 285 LCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEH 364 (435)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 364 (435)
+++ +++.+.+... ..+.+.++|.++..++.+.+ .+.+..++.++ .++.+.+.|+.++. +.+
T Consensus 249 ---~~~----l~~~l~~~~~--~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~-~r~~l~~~L~~~~~---~~~ 309 (374)
T PRK02610 249 ---HPE----LIAVLEKVRL--PYNLPSFSQLAAQLALEHRQ------ELLAAIPEILQ-ERDRLYQALQELPQ---LRV 309 (374)
T ss_pred ---CHH----HHHHHHHhcC--CCCCCHHHHHHHHHHhcCHH------HHHHHHHHHHH-HHHHHHHHHHhCCC---cEe
Confidence 888 8888877542 34678899999999987642 44555555444 46778888877632 443
Q ss_pred cccCcceeEecCC----CHHHHHHHhhhccEEEeCCC---cEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 365 ITNQLGMFCFSGL----TPYQVDRLAKEFHIYMTQDG---RISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 365 ~~~~~g~~~~~~~----~~~~~~~ll~~~gI~i~pgg---Ris~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
.+++|+|+|+.+ +.+.+.+.++++||.+.++. ||+++. .+++++++++|+++++.+
T Consensus 310 -~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~~~lRls~~~--~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 310 -WPSAANFLYLRLSQDAALAALHQALKAQGTLVRHTGGGLRITIGT--PEENQRTLERLQAALTQL 372 (374)
T ss_pred -CCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeCCCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence 478899999865 33445444577999998753 999964 467899999999988654
No 71
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.7e-42 Score=332.95 Aligned_cols=330 Identities=9% Similarity=0.052 Sum_probs=257.7
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
..+++|+|+.|++ .+++++.+++.+...+.. ...| |..|.++||+++++++ +. ++++|+ +++|++
T Consensus 27 ~~~~~i~l~~nen----~~~~~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~-~~-----~~~~I~--vt~Gs~ 91 (366)
T PRK01533 27 GDHSFVKLASNEN----PFGCSPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKL-HV-----KMEQVL--CGSGLD 91 (366)
T ss_pred CCCceEEeCCCCC----CCCCCHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHh-CC-----CcceEE--ECCCHH
Confidence 3468999999994 224444454444443322 2336 5579999999999998 32 277998 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++.++ +.+++.+||+|++++|+|+.|...++..|++++.+++ + ++++|++++++++. ++++++++++||||
T Consensus 92 e~i~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~-~--~~~~d~~~l~~~~~---~~~~~v~i~~P~NP 163 (366)
T PRK01533 92 EVIQII--SRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVAL-N--NGVYDLDEISSVVD---NDTKIVWICNPNNP 163 (366)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeec-C--CCCcCHHHHHHHhC---cCCcEEEEeCCCCC
Confidence 999988 6777899999999999999999999999999999987 2 34799999999886 56789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+++|++++ ++|+||+|.+|.+.+. ....+ ...+..+++|+++||||.||++|+|+||+++
T Consensus 164 TG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~--~~~~~-~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~--- 236 (366)
T PRK01533 164 TGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD--FPETL-PLLEKHKNILVLRTFSKAYGLASFRVGYAVG--- 236 (366)
T ss_pred CCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc--Ccchh-HHhccCCCEEEEeCchHHhcChHHHHhHHhC---
Confidence 999999999999999999877 5677999988876421 11222 2234457899999999999999999999964
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+... ..+++.++|.++..+|.+. ++.++.++.++++++.+.+.++.+| +.+.++
T Consensus 237 ~~~----~~~~l~~~~~--~~~~~~~~q~aa~~~l~~~-------~~~~~~~~~~~~~r~~~~~~l~~~g----~~~~~~ 299 (366)
T PRK01533 237 HEE----LIEKLNVVRL--PFNVSSLAQKAATIAFGDD-------EFIEEIVRVNTEGLRQYESFCKENE----IPFYQS 299 (366)
T ss_pred CHH----HHHHHHHhcC--CCCcCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHhCC----CccCCC
Confidence 788 8888887542 3679999999999999764 5556666777777888888888776 446666
Q ss_pred CcceeEecCC-CHHHHHHHhhhccEEEeCCC---cEEeccCCCCcHHHHHHHHHHHHHhhhhhh
Q 013839 368 QLGMFCFSGL-TPYQVDRLAKEFHIYMTQDG---RISMAGVTTGNVNYLANAIHEVTRSEQETA 427 (435)
Q Consensus 368 ~~g~~~~~~~-~~~~~~~ll~~~gI~i~pgg---Ris~~~~~~e~i~~~~~~l~~~l~~~~~~~ 427 (435)
+ |.|+|+.+ +.+.+...|.++||.+++.. ||+++ +.+++++++++|+++++..+.++
T Consensus 300 ~-~nf~~~~~~~~~~~~~~l~~~GI~Vr~~~~~iRis~~--~~~~~~~l~~al~~~~~~~~~~~ 360 (366)
T PRK01533 300 Q-TNFIFLPVENGGEIYEACAHAGFIIRPFPNGVRITVG--TREQNEGVISVLQQHFENKKRKS 360 (366)
T ss_pred c-CcEEEEeCCCHHHHHHHHHHCCcEEccCCCceEEeCC--CHHHHHHHHHHHHHHHHhccccc
Confidence 5 55888877 44455455567999999863 99985 46888999999999987655443
No 72
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=4.9e-42 Score=331.17 Aligned_cols=332 Identities=15% Similarity=0.129 Sum_probs=255.3
Q ss_pred hhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcc-ccC
Q 013839 37 INGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDV-VKE 115 (435)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~ 115 (435)
+....++.++ ..+..++|+.|+| +. +. ++.+.+++..... ...|+++.|.++||+++++++....+.+ +.+
T Consensus 9 ~~~~~~~~~~-~~~~~i~l~~~~p-~~---~~-~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~ 80 (357)
T TIGR03539 9 LAPYKAKAAS-HPDGIVDLSVGTP-VD---PV-PPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLDP 80 (357)
T ss_pred HHHHHHHhhh-CCCCeEEccCCCC-CC---CC-CHHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCc
Confidence 4455555543 5578899999996 32 22 3344444444332 4569999999999999999995443433 568
Q ss_pred CCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCC
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPD 194 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~ 194 (435)
++|+ +|+|+++++.++ +..+ +.+||.|++++|+|+.+...++..|++++.++ +++.+. . +
T Consensus 81 ~~I~--it~G~~~~i~~~--~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~---~ 141 (357)
T TIGR03539 81 TAVL--PVIGTKELVAWL--PTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---P---V 141 (357)
T ss_pred CeEE--EccChHHHHHHH--HHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---c---c
Confidence 8998 999999998887 5545 68999999999999999988899999887763 222221 1 4
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHH--hhhcCCeEEEEecccccc
Q 013839 195 SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRI--FLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~s~SK~~ 272 (435)
+++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ....+.. .....+++++++||||.|
T Consensus 142 ~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~ 219 (357)
T TIGR03539 142 GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR--PVSILDPRVCGGDHTGLLAVHSLSKRS 219 (357)
T ss_pred CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC--CccceecccCCCccccEEEEecccccc
Confidence 678999999999999999999999999999999999999999998887541 1111100 011235799999999999
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQN 352 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 352 (435)
+++|+|+||+++ +++ +++.+.+.......+++.+.|.++..+|.+. ++.+..++.++++++.+.+.
T Consensus 220 ~~~G~R~G~~i~---~~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~ 285 (357)
T TIGR03539 220 NLAGYRAGFVAG---DPA----LVAELLTVRKHAGLMVPAPVQAAMVAALGDD-------GHVAEQKARYAARRAQLKPA 285 (357)
T ss_pred CCCceeEEEEec---CHH----HHHHHHHHHhhcccCCCHHHHHHHHHHcCCH-------HHHHHHHHHHHHHHHHHHHH
Confidence 999999999964 788 7777777665556678899999999999763 55677888999999999999
Q ss_pred HHhhCCCCCccccccCcceeEecCC--CHHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHH
Q 013839 353 LEKLGSSLNWEHITNQLGMFCFSGL--TPYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAI 416 (435)
Q Consensus 353 l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l 416 (435)
|++.| +.+..+++|+|+|+.+ +...+...++++||.+.||. ||+++. +++++++++++|
T Consensus 286 L~~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l 356 (357)
T TIGR03539 286 LEKAG----FRIDHSEAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL 356 (357)
T ss_pred HHHcC----CCCcCCCccEEEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence 98876 4577789999999965 44445445578999999861 999987 778888888876
No 73
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=9.3e-42 Score=336.31 Aligned_cols=346 Identities=15% Similarity=0.087 Sum_probs=256.3
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCC-----CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS-----EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
++++|+|+.|.| + ..+.+...++++....... ....|++..|.++||++|++++....+..+++++|+ +|
T Consensus 29 ~~~~i~l~~g~p-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~--it 103 (416)
T PRK09440 29 TPGAIMLGGGNP-A--HIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIA--LT 103 (416)
T ss_pred CCCceeccCCCC-C--ccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEE--Ec
Confidence 367899999997 2 2244455666666554321 235799999999999999999954434445689999 99
Q ss_pred CCchhHHHHHHHHHHHhC-----CCCEEEE-cCCCChhhHHHHhhCC----CCeeeeeecCCC--CCCcChHhHHHHhhc
Q 013839 124 LSGTGACRLFAEFQRRFH-----PESHIYF-PDPTWSNHHNIWRDAQ----IPERTYHYYDPD--SKSLDFAALMDDIKN 191 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~-----~gd~Vlv-~~p~y~~~~~~~~~~g----~~~~~v~~~~~~--~~~~d~e~l~~~i~~ 191 (435)
+|+++++.++ +..++. +||.|++ ++|+|+.|...+...+ .....+++ +++ ++++|++.|+ +.
T Consensus 104 ~Ga~~al~~~--~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~--~~- 177 (416)
T PRK09440 104 NGSQSAFFYL--FNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL-PEGQFKYHVDFEHLH--ID- 177 (416)
T ss_pred cChHHHHHHH--HHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccc-cccccccCCCHHHcc--cC-
Confidence 9999999888 555664 6899999 6999999987554333 22222333 222 3689999987 33
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccc
Q 013839 192 APDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKS 271 (435)
Q Consensus 192 ~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 271 (435)
.+++++++++||||||.+++.+++++|+++|++|+++||+||+|..+.... ...+. .....+++|+++||||.
T Consensus 178 --~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~---~~~~~--~~~~~~~vI~~~SfSK~ 250 (416)
T PRK09440 178 --EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI---IFSEA--TPLWNPNIILCMSLSKL 250 (416)
T ss_pred --CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc---chhhc--CccccCCeEEEeccccc
Confidence 567999999999999999999999999999999999999999997543210 01111 11124689999999996
Q ss_pred ccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHH-HHHHHHHHHHHHH
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKI-MADRIQRKRTTLR 350 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~~~l~ 350 (435)
++||+|+||+++ +++ +++.+.........+++.+.|.++..++.++. |.++..+ .++.|+++++.+.
T Consensus 251 -~~pGlRiG~~i~---~~~----l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~r~~~~~ 318 (416)
T PRK09440 251 -GLPGVRCGIVIA---DEE----IIEALSNMNGIISLAPGRLGPAIAAEMIESGD----LLRLSETVIRPFYRQKVQLAI 318 (416)
T ss_pred -CCCcceEEEEeC---CHH----HHHHHHHHHHHhccCCCcHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHHHH
Confidence 899999999974 888 88888877665566789999999999998765 3344433 5777888888888
Q ss_pred HHHHhhCCCCCccccccCcceeEecCC-----CHHHHHHHhhhccEEEeCC---------------C--cEEeccCCCCc
Q 013839 351 QNLEKLGSSLNWEHITNQLGMFCFSGL-----TPYQVDRLAKEFHIYMTQD---------------G--RISMAGVTTGN 408 (435)
Q Consensus 351 ~~l~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~ll~~~gI~i~pg---------------g--Ris~~~~~~e~ 408 (435)
+.|.+.-....+.+..+++|+|+|+.+ +.+.+.+.++++||.+.|| + ||+++. ++++
T Consensus 319 ~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~ 397 (416)
T PRK09440 319 ALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEE 397 (416)
T ss_pred HHHHHhcccCCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC-CHHH
Confidence 888764111124456788999999954 3344444456789999874 1 899976 7899
Q ss_pred HHHHHHHHHHHHHhhhh
Q 013839 409 VNYLANAIHEVTRSEQE 425 (435)
Q Consensus 409 i~~~~~~l~~~l~~~~~ 425 (435)
+++++++|++++++..+
T Consensus 398 l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 398 IEKGIAILAEEVEKAYA 414 (416)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999876543
No 74
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-41 Score=304.42 Aligned_cols=345 Identities=13% Similarity=0.108 Sum_probs=288.5
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchh
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTG 128 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~ 128 (435)
+++++-|.+.+. |+ +.|++++++..+.+..+ ..+|+ .+..++.+++++|...++...++++.+. ++.|..-
T Consensus 24 ~~DvlPmWVADM-Df---~~pp~i~~Al~~rvdhG-vfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~--~~p~VVp 94 (388)
T COG1168 24 NEDVLPMWVADM-DF---PTPPEIIEALRERVDHG-VFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIV--FVPGVVP 94 (388)
T ss_pred CCCcceeeeecc-cC---CCCHHHHHHHHHHHhcC-CCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEE--EcCcchH
Confidence 479999999994 77 66777777666777666 66686 5677899999999988888888899988 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCC-CCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPD-SKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
++.++ +..+..|||.|++..|.|+++.......|.+++..|+..++ .|.+|+++|++++.+ .+.+++++||||||
T Consensus 95 gi~~~--I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~iLCnPHNP 170 (388)
T COG1168 95 GISLA--IRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLFILCNPHNP 170 (388)
T ss_pred hHHHH--HHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--CCccEEEEeCCCCC
Confidence 99888 77788899999999999999999999999999999986333 377899999999984 45699999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh-hhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF-LEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
||.++++++|++|.++|++||+.||+||+++++.+.+ ..+.+...+ ....++.|.+.|.||+|.++|++++++++ .
T Consensus 171 ~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g--~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii-~ 247 (388)
T COG1168 171 TGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGG--HKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIII-S 247 (388)
T ss_pred CCccccHHHHHHHHHHHHHcCCEEEeecccccccccC--CCccchhhcChhhhcceEEEeeccccccchhhhheeEEe-c
Confidence 9999999999999999999999999999999999976 233333332 23468999999999999999999999974 4
Q ss_pred cChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
+++...++.+++. .....+++.++..|..++.++++ .++.+.++.++.+++++.+.+++.- | .+++..
T Consensus 248 -n~~lr~~~~~~l~---~~~~~~~n~lg~~A~~aAY~~G~------~WLd~L~~yl~~N~~~~~~~l~~~~-P-~v~v~~ 315 (388)
T COG1168 248 -NRELRAKFLKRLK---RNGLHGPSALGIIATEAAYNQGE------PWLDELLEYLKDNRDYVADFLNKHL-P-GVKVTE 315 (388)
T ss_pred -CHHHHHHHHHHHH---HhcCCCCchHHHHHHHHHHHhch------HHHHHHHHHHHHHHHHHHHHHHhhC-C-CcEEec
Confidence 7773344444444 34567899999999999999886 8889999999999999999997762 1 378899
Q ss_pred cCcceeEecCC-----C-HHHHHHHhhhccEEEeCC---C-------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 367 NQLGMFCFSGL-----T-PYQVDRLAKEFHIYMTQD---G-------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 367 ~~~g~~~~~~~-----~-~~~~~~ll~~~gI~i~pg---g-------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
|+|.+-+|+++ + .+..+.++++.+|.+.+| | |++++. +.+-+++++++|+..++.
T Consensus 316 p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~ 386 (388)
T COG1168 316 PQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKK 386 (388)
T ss_pred CCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhc
Confidence 99999999965 5 355688889999999988 2 999987 889999999999988764
No 75
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-41 Score=330.30 Aligned_cols=338 Identities=16% Similarity=0.193 Sum_probs=262.6
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcC---CCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG---SEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.+++++|+.|.| +. + +++.+.++...... .....|.+..|.+++|+++++++.......+.+++|+ +++|
T Consensus 32 ~~~~~~l~~g~p-~~---~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~--~t~G 104 (394)
T PRK06836 32 ADNVFDFSLGNP-SV---P-PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIV--MTCG 104 (394)
T ss_pred CCCeEEecCcCC-CC---C-CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEE--EeCC
Confidence 357899999986 32 2 33445555444331 1246798999999999999999954444445588998 9999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAH 205 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~ 205 (435)
+++++.++ +..++.+||.|++++|+|..+...++..|++++.+++ +++++++|++++++++. ++++++++++||
T Consensus 105 ~~~al~~~--~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~-~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~ 178 (394)
T PRK06836 105 AAGALNVA--LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPT-DTDTFQPDLDALEAAIT---PKTKAVIINSPN 178 (394)
T ss_pred hHHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEec-CCccCcCCHHHHHhhcC---cCceEEEEeCCC
Confidence 99999888 6667899999999999999999999999999999998 45558899999999997 578899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHh------cCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcc
Q 013839 206 NPTGVDPTEEQWREISYQFKV------KGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRV 279 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~------~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~Rv 279 (435)
||||.+++.+++++|+++|++ |++++|+||+|.++.+++. ..+++ ....+++++++||||.+|+||+|+
T Consensus 179 NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~---~~~~~~~i~~~S~SK~~~~pGlRi 253 (394)
T PRK06836 179 NPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA--EVPYI---FKYYDNSIVVYSFSKSLSLPGERI 253 (394)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC--CCCCh---HHccCcEEEEecchhhccCcceee
Confidence 999999999999999999999 8999999999999987631 11222 123468999999999999999999
Q ss_pred cEEEEEecChhHH--HHHHHHHHHHhhc-cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013839 280 GCLSILCVDSKQA--AAIRSQIQQIARA-MYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL 356 (435)
Q Consensus 280 G~~~~~~~~~~~~--~~~~~~l~~~~~~-~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 356 (435)
||+++ +++.. ..++..+....+. ...+++.+.|.++..++.+.. .+++++++++.+.+.|+++
T Consensus 254 G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----------~~~~~~~~r~~l~~~L~~~ 319 (394)
T PRK06836 254 GYIAV---NPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV-----------DVSIYKRNRDLLYDGLTEL 319 (394)
T ss_pred EEEec---CHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH-----------HHHHHHHHHHHHHHHHHhC
Confidence 99964 55411 1122223222222 234678889999999987631 2456788889999999887
Q ss_pred CCCCCccccccCcceeEecCC---CHHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 357 GSSLNWEHITNQLGMFCFSGL---TPYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~~~~---~~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
| +.+..+++|+|+|+.+ +...+...++++||.+.||. ||+++. +++++++++++|++++++.
T Consensus 320 g----~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 320 G----FECVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKLAKEY 392 (394)
T ss_pred C----CEeecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 6 5677888999999865 34444445577899999982 999985 8999999999999998653
No 76
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-41 Score=322.98 Aligned_cols=330 Identities=16% Similarity=0.194 Sum_probs=252.7
Q ss_pred hhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC
Q 013839 37 INGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG 116 (435)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 116 (435)
+.+..+++.. .+.++|+|+.|++ +. .+++.+.+.+...+ .. ...|++ .|.++||+++++++ + ++++
T Consensus 18 ~~~~~~~~~~-~~~~~i~l~~~~~-~~---~~~~~~~~~~~~~~-~~-~~~Y~~-~~~~~lr~~ia~~~-~-----~~~~ 83 (357)
T PRK14809 18 IEEVARELGL-DPDDLVKLSSNEN-PH---GPSPAAVEAIREAA-ER-VHSYPK-ASHADLTAALADRW-D-----VSPE 83 (357)
T ss_pred HHHHHHHhCC-CccceeEecCCCC-CC---CCCHHHHHHHHHHH-hh-hhcCCC-CCHHHHHHHHHHHh-C-----CCcc
Confidence 4445555532 4568999999984 22 33334443333333 22 456865 78999999999998 3 2377
Q ss_pred CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCc
Q 013839 117 RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
+|+ +|+|+++++.++ +.+++++||.|++++|+|..+....+..|++++.+++..++++.+|++.+.+.. +++
T Consensus 84 ~I~--it~G~~~al~~~--~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~----~~~ 155 (357)
T PRK14809 84 QVW--LANGGDGALDYL--ARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY----DGE 155 (357)
T ss_pred eEE--ECCCHHHHHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh----cCC
Confidence 888 999999999888 666789999999999999989888888999999998843445778888776654 246
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccC
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYG 276 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G 276 (435)
+++++++||||||.+++.+++++|++.|++ +++||+||+|.++.+.+ ..... .+..+++++++||||.||++|
T Consensus 156 k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~-----~~~~~-~~~~~~vi~~~SfSK~~~~~G 228 (357)
T PRK14809 156 RIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP-----SAVAL-VEERDDVAVLRTFSKAYGLAG 228 (357)
T ss_pred cEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc-----hhHHH-HhhCCCEEEEecchhHhcCcc
Confidence 888999999999999999999999999975 78999999999988642 12222 234578999999999999999
Q ss_pred CcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013839 277 HRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL 356 (435)
Q Consensus 277 ~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 356 (435)
+|+||+++ +++ +++.+.+... ..+.+.++|.++..+|.+. +++++.++.++++++.+.+.|...
T Consensus 229 lRiG~~~~---~~~----~~~~~~~~~~--~~~~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~ 292 (357)
T PRK14809 229 LRLGYAVV---PEE----WADAYARVNT--PFAASELACRAGLAALDDD-------EHVERTVETARWAREYIREELDAP 292 (357)
T ss_pred hhheeeec---CHH----HHHHHHHhCC--CCCCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999974 777 7777777542 4567888999998888753 567777888888998888888543
Q ss_pred CCCCCccccccCcceeEecCC-CHHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 357 GSSLNWEHITNQLGMFCFSGL-TPYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~~~~-~~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
. . +.+|+|+|+.+ +.+.+.+.++++||.+.||. ||+++ +.+++++++++|+++++
T Consensus 293 ~-------~-~~~g~f~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 293 T-------W-ESAGNFVLAEVGDASAVAEAAQERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred c-------C-CCCCCEEEEECCCHHHHHHHHHHCCEEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 2 1 46788999987 44444344577899999872 99985 46899999999998764
No 77
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=302.63 Aligned_cols=320 Identities=15% Similarity=0.204 Sum_probs=269.5
Q ss_pred CCCCCCCcccHHHHHHHHHhH--cCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-
Q 013839 85 FLESISASVSTKMVEESVKLV--YGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR- 161 (435)
Q Consensus 85 ~~~Y~~~~g~~~lr~~ia~~l--~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~- 161 (435)
...|.+..|++++|+++|+++ ........+|++++ +++|+|+|++.+ ...+..|||..++|.|.|+++..-++
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~V--v~~G~T~ane~l--~fcLadpgdafLvPtPyY~gfdrdl~~ 189 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVV--VTNGATSANETL--MFCLADPGDAFLVPTPYYPGFDRDLRW 189 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceE--EecccchhhHHH--HHHhcCCCceeeecCCCCCccccccee
Confidence 346888899999999999998 23334457799988 999999999988 56678899999999999999976666
Q ss_pred hCCCCeeeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCC
Q 013839 162 DAQIPERTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQ 238 (435)
Q Consensus 162 ~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~ 238 (435)
..|.++++|.+...++++++++.+|.++.++ ..+.+.+++.||+||.|++++++++..++++|.++++.+|+||+|.
T Consensus 190 rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya 269 (471)
T KOG0256|consen 190 RTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA 269 (471)
T ss_pred ccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc
Confidence 4588999999977778999999999998764 4577999999999999999999999999999999999999999999
Q ss_pred CccCCCCcccHHHHHHhhh----cCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhH
Q 013839 239 GFASGDLDKDAQAIRIFLE----DEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHG 314 (435)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 314 (435)
.-.|+.. ...++.+... ..+++.++.|+||-+|+||+|+|.+. +.+++ ++++.++.++ +...++..
T Consensus 270 ~sVF~~~--~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviY--S~ne~----VvsaA~kmss--f~~vSs~t 339 (471)
T KOG0256|consen 270 GSVFDKS--EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIY--SNNED----VVSAATKMSS--FGLVSSQT 339 (471)
T ss_pred ccccCcc--CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEE--ecChH----HHHHHHHHhh--ccCCcHHH
Confidence 9999863 4445444432 35789999999999999999999994 66888 8888887653 56789999
Q ss_pred HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC---------CH--HHHH
Q 013839 315 ILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL---------TP--YQVD 383 (435)
Q Consensus 315 q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~---------~~--~~~~ 383 (435)
|+.++.+|++..+ .++++++..+|++.+..++.+.|+.+|+ .+++.++|+|+|+++ .. ++.+
T Consensus 340 Q~~la~LLSD~~f---~~~yl~en~~Rl~~rh~~~~~gLk~lgI----~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~ 412 (471)
T KOG0256|consen 340 QYLLASLLSDEEF---TREYLRENNKRLRIRHRYIVEGLKALGI----PCLKSNAGLFCWVDLRKLLTSLTFEGELELWE 412 (471)
T ss_pred HHHHHHHhchHHH---HHHHHHHHHHHHHHHHHHHHhhHHhcCC----ceeecCCeeEEEEEhHHhcCcCChHHHHHHHH
Confidence 9999999998653 2367889999999999999999999995 599999999999976 12 2447
Q ss_pred HHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHHhhhh
Q 013839 384 RLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 384 ~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
+++++-++-+.||. |++|+++.++.++-+++||+.++.+...
T Consensus 413 ~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~~ 464 (471)
T KOG0256|consen 413 RILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQVQ 464 (471)
T ss_pred HHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhhc
Confidence 77776699999993 9999997777777799999999985543
No 78
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-40 Score=323.55 Aligned_cols=330 Identities=15% Similarity=0.124 Sum_probs=254.3
Q ss_pred CeeeeecceecCCCCCcccchHHHHHHHHhcC--CCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchh
Q 013839 51 YKINLGVGAYRDDKGRPVVLQCVREAEAKIAG--SEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTG 128 (435)
Q Consensus 51 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~ 128 (435)
..|+|+.|++ +. ++++...+.+.+.+.. .....|++ .|.++||+++++++...++..+.+++|+ +|+|+++
T Consensus 27 ~~i~l~~~~~-~~---~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~--it~G~~~ 99 (368)
T PRK03317 27 VPVRLNTNEN-PY---PPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVW--AANGSNE 99 (368)
T ss_pred ceeEecCCCC-CC---CCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEE--ECCCHHH
Confidence 5799999995 22 3343343333333321 12456865 6899999999999965544456688999 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT 208 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt 208 (435)
++.++ +.+++++||.|+++.|+|..|...++..|.+++.++. .+++++|++.+++++.+ .+++++++++|||||
T Consensus 100 ~l~~~--~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NPt 173 (368)
T PRK03317 100 ILQQL--LQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAE--HRPDVVFLTSPNNPT 173 (368)
T ss_pred HHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCCC
Confidence 99998 7777899999999999999999999999999888876 44679999999999863 356788899999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecC
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVD 288 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~ 288 (435)
|.+++.+++++|++.| ++++|+||+|.+|.+.+. .+.. ...+..+++++++||||.+|++|+|+||+++ +
T Consensus 174 G~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~---~~~~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~---~ 243 (368)
T PRK03317 174 GTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT---PSAL-TLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA---A 243 (368)
T ss_pred CCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC---cCHH-HHHHhCCCEEEEEechhhhccchhhhhhhhC---C
Confidence 9999999888888877 689999999999876531 1122 2223345899999999999999999999964 8
Q ss_pred hhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC
Q 013839 289 SKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ 368 (435)
Q Consensus 289 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 368 (435)
++ +++.+.+... ..+.+.++|.++..+|.+. +...+.+++++++++.+.+.|++.| +.+..++
T Consensus 244 ~~----~~~~l~~~~~--~~~~s~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~ 306 (368)
T PRK03317 244 PA----VVDALRLVRL--PYHLSAVTQAAARAALRHA-------DELLASVAALRAERDRVVAWLRELG----LRVAPSD 306 (368)
T ss_pred HH----HHHHHHhcCC--CCCCCHHHHHHHHHHhhCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CEeCCCC
Confidence 88 8887776542 4568889999998998753 2233445667888888999998876 4567788
Q ss_pred cceeEecCC-CHHHHHHHhhhccEEEeCCC-----cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 369 LGMFCFSGL-TPYQVDRLAKEFHIYMTQDG-----RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 369 ~g~~~~~~~-~~~~~~~ll~~~gI~i~pgg-----Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
+++++|..+ +.+.+.+.+.++||.+.+.+ ||+++ +.++++.++++|+++++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 307 ANFVLFGRFADRHAVWQGLLDRGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEVLAT 364 (368)
T ss_pred CcEEEEeccCCHHHHHHHHHHCCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 998888765 44445445567899999864 99984 567889999999888753
No 79
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.3e-40 Score=316.98 Aligned_cols=333 Identities=13% Similarity=0.125 Sum_probs=252.5
Q ss_pred hHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCe
Q 013839 39 GVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRS 118 (435)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v 118 (435)
...+++. ....++++|+.|.+ .. ..++.. .+++.+.... ...|++ .+.++||+++++++ +. ++++|
T Consensus 9 ~~~~~~~-~~~~~~~~l~~~~~-~~---~~p~~~-~~a~~~~~~~-~~~Y~~-~~~~~lr~~ia~~~-~~-----~~~~i 74 (354)
T PRK06358 9 EIAREKG-LTKNMILDFSANIN-PL---GVPESL-KQAITENLDK-LVEYPD-PDYLELRKRIASFE-QL-----DLENV 74 (354)
T ss_pred HHHHHhC-CCccceEEecCCCC-CC---CCCHHH-HHHHHHHHHh-hhcCCC-ccHHHHHHHHHHHh-CC-----ChhhE
Confidence 4444543 23456899999984 21 233333 3344433322 455866 46899999999998 32 37899
Q ss_pred eeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEE
Q 013839 119 AGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFF 198 (435)
Q Consensus 119 ~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ 198 (435)
+ +|+|+++++.++ +.+ +.+ ++|++++|+|+.|...++..|++++.+++..++++.+| +++.+.+. .++++
T Consensus 75 ~--it~Ga~~~l~~~--~~~-~~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~---~~~~~ 144 (354)
T PRK06358 75 I--LGNGATELIFNI--VKV-TKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK---EEIDL 144 (354)
T ss_pred E--ECCCHHHHHHHH--HHH-hCC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc---cCCCE
Confidence 8 999999999887 444 344 68999999999999999999999999998434457888 67666665 45788
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCc
Q 013839 199 LLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHR 278 (435)
Q Consensus 199 v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~R 278 (435)
+++++||||||.+++.+++++|+++|++|++++|+||+|.+|.+++. ..+.....+..+++|+++||||.+|++|+|
T Consensus 145 v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~---~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R 221 (354)
T PRK06358 145 VFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENE---TISMINYLENFKNLIIIRAFTKFFAIPGLR 221 (354)
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCcc---chhHHHhccCCCCEEEEEechhhccCcchh
Confidence 88999999999999999999999999999999999999999987641 223222234457899999999999999999
Q ss_pred ccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 013839 279 VGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGS 358 (435)
Q Consensus 279 vG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 358 (435)
+||++ +++++ +++.+.+... ..+.+.++|.++..++.+. +++++.++.++++++.+.+.|++++.
T Consensus 222 iG~lv--~~~~~----~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~~ 286 (354)
T PRK06358 222 LGYGL--TSNKN----LAEKLLQMRE--PWSINTFADLAGQTLLDDK-------EYIKKTIQWIKEEKDFLYNGLSEFKG 286 (354)
T ss_pred heeee--cCCHH----HHHHHHHhCC--CCcchHHHHHHHHHHhccH-------HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99996 33466 7777776543 3567889999999999753 56778888899999999999988632
Q ss_pred CCCccccccCcceeEecCCC--HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHH
Q 013839 359 SLNWEHITNQLGMFCFSGLT--PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 359 ~~~~~~~~~~~g~~~~~~~~--~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l 420 (435)
+.+..++++ |+|+.+. .++.+.+ .++||.+.||. |++++ +.++.++++++|++++
T Consensus 287 ---~~~~~~~g~-f~~~~~~~~~~~~~~l-~~~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 287 ---IKVYKPSVN-FIFFKLEKPIDLRKEL-LKKGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL 353 (354)
T ss_pred ---cEEcCCcce-EEEEEcCchHHHHHHH-HHCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 556666655 8888773 3444555 46899999862 89984 5678899999988764
No 80
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-40 Score=318.65 Aligned_cols=325 Identities=16% Similarity=0.152 Sum_probs=250.3
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
..+++|+|+.|.+ +. . +++.+.+++.+.... ..+|++..| .+||+++++++ +. ++++|+ +|+|++
T Consensus 34 ~~~~~i~l~~~~~-~~---~-~~~~~~~al~~~~~~-~~~Y~~~~g-~~lr~~ia~~~-~~-----~~~~i~--~t~G~~ 98 (371)
T PRK05166 34 GVPRIAKLGSNEN-PL---G-PSPAVRRAFADIAEL-LRLYPDPQG-RALREAIAART-GV-----PADRII--LGNGSE 98 (371)
T ss_pred CCcceEEcCCCCC-CC---C-CCHHHHHHHHHHHHH-hhcCCCCcH-HHHHHHHHHHh-Cc-----CHHHEE--EcCCHH
Confidence 3468999999985 11 2 333444444443323 556999888 49999999997 33 267888 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++.++ +.+++.+||+|+++.|+|+.+...++..|++++.+++ .+++++|++++++.+. ++++++++++||||
T Consensus 99 ~~l~~~--~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NP 171 (371)
T PRK05166 99 DLIAVI--CRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTV--TPDLGFDLDALCAAVA---RAPRMLMFSNPSNP 171 (371)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeec--CCCCCCCHHHHHHhhh---cCCCEEEEeCCCCC
Confidence 999888 6666889999999999999999999999999999987 3357899999999887 56788999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|++.|++ ++++|+||+|.++.+++. ..+.+....+..+++|+++||||.||++|+|+||++ ++
T Consensus 172 tG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i--~~ 246 (371)
T PRK05166 172 VGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDD--YPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGL--VS 246 (371)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcC--cccHHHHHhhcCCCEEEEeechHhhhcchhheeeee--cC
Confidence 9999999999999999875 889999999999986431 112222233334689999999999999999999985 33
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+... ..+++.++|.++..++.+. .++++.++.++++++.+.+.|++.+ +.+ .+
T Consensus 247 ~~~----l~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~g----~~~-~p 308 (371)
T PRK05166 247 DPE----LVGLLDRVRT--PFNVNGAAQAAALAALDDE-------EHLAKGVALALAERERLKKELAEMG----YRI-AP 308 (371)
T ss_pred CHH----HHHHHHHhcc--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCc----Cee-CC
Confidence 677 7777766442 3568889998888888754 4567777889999999999999886 333 35
Q ss_pred CcceeEecCC--CHH-HHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHHHHHH
Q 013839 368 QLGMFCFSGL--TPY-QVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 368 ~~g~~~~~~~--~~~-~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l~~~l 420 (435)
.+|+|+|+.+ +.+ +.+.++ ++||.+.|+. ||+++. .++.+++.++|++++
T Consensus 309 ~~g~fl~~~~~~~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 309 SRANFLFFDARRPASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKVL 369 (371)
T ss_pred CcCCEEEEeCCCCHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence 6678999976 333 445554 5799999872 999964 556677777777654
No 81
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=7.7e-40 Score=316.52 Aligned_cols=316 Identities=13% Similarity=0.120 Sum_probs=246.5
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
++.++|+.|++ ..++++.+++++...+.. ...|++.. .++||++|++++ +. ++++|+ +|+|++++
T Consensus 43 ~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~~-~~~Lr~aia~~~-~v-----~~e~I~--it~Gs~~a 107 (370)
T PRK09105 43 EGAVFLNANEC----PLGPSPAARDAAARSAAL--SGRYDLEL-EDDLRTLFAAQE-GL-----PADHVM--AYAGSSEP 107 (370)
T ss_pred CCcEEecCCCC----CCCCCHHHHHHHHHHHHH--hcCCCCch-HHHHHHHHHHHh-Cc-----ChhhEE--EcCChHHH
Confidence 67899999984 224444454544444322 23487754 899999999987 33 277998 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ +..++++||+|++++|+|+.|...++..|++++.+++ .+++.+|++++++. . +++++++++|||||||
T Consensus 108 i~~~--~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~-~---~~~~~v~l~nP~NPTG 179 (370)
T PRK09105 108 LNYA--VLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPL--RADGAHDVKAMLAA-D---PNAGLIYICNPNNPTG 179 (370)
T ss_pred HHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecC--CCCCCCCHHHHHhc-C---CCCCEEEEeCCCCCCC
Confidence 9998 6777889999999999999999999999999999988 33578999999876 3 4578999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.++++++++.++ +++++|+||+|.+|... ++...+.+..+++++++||||.||++|+|+||+++ ++
T Consensus 180 ~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~------~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~---~~ 249 (370)
T PRK09105 180 TVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA------PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAA---RP 249 (370)
T ss_pred cCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC------cchHHHHhhCCCEEEEecccHhhcCCccceeeeec---CH
Confidence 9999999999998754 58999999999877532 12233334567899999999999999999999974 88
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+.+. ....++.+.|.++..+|.+. +++++.+++++++++.+.+.|++++ +.+.++++
T Consensus 250 ~----~i~~l~~~---~~~~~~~~~~~aa~~~L~~~-------~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~ 311 (370)
T PRK09105 250 D----LLAKLARF---GHNPLPVPAAAAGLASLRDP-------KLVPQRRAENAAVREDTIAWLKKKG----YKCTPSQA 311 (370)
T ss_pred H----HHHHHHhc---CCCCcCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CCcCCCCC
Confidence 8 77777765 23458888888888888764 5677888899999999999999876 45667888
Q ss_pred ceeEecCC--CHH-HHHHHhhhccEEEeCC-----C--cEEeccCCCCcHHHHHHHHHHHH
Q 013839 370 GMFCFSGL--TPY-QVDRLAKEFHIYMTQD-----G--RISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 370 g~~~~~~~--~~~-~~~~ll~~~gI~i~pg-----g--Ris~~~~~~e~i~~~~~~l~~~l 420 (435)
+||. +.+ +.+ +.+.++ ++||.+..+ + ||+++ +++++++++++|++++
T Consensus 312 ~f~~-~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 312 NCFM-VDVKRPAKAVADAMA-KQGVFIGRSWPIWPNWVRVTVG--SEEEMAAFRSAFAKVM 368 (370)
T ss_pred cEEE-EeCCCCHHHHHHHHH-HCCcEEecCCCCCCCeEEEEcC--CHHHHHHHHHHHHHHh
Confidence 8765 544 444 446665 569998421 2 99985 4677888888888765
No 82
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.1e-39 Score=339.59 Aligned_cols=344 Identities=13% Similarity=0.109 Sum_probs=255.5
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcccc-CCCeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVK-EGRSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~v~~~~t~gg 126 (435)
+++++|+|+.|++ +. ++|+.+.+.+...+... . + ..|.+++++++++++....+.+.+ +++|+ +++|+
T Consensus 695 ~g~~vI~LsinE~-d~---ppPp~V~eAi~eal~~~-~--~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~II--vt~Gs 763 (1082)
T PLN02672 695 QESSLIHMDVDES-FL---PVPSAVKASIFESFVRQ-N--I--SESETDPRPSILQFIKSNYGFPTDSCTEFV--YGDTS 763 (1082)
T ss_pred CCCCEEEEeCCCC-CC---CCCHHHHHHHHHHHhhc-C--C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEE--EeCCH
Confidence 4578999999995 33 44444444433333322 1 2 345678899999988444333332 35787 88888
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCC-
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAH- 205 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~- 205 (435)
++++.++ +.++++|||+|+++.|+|+.|...++..|++++.+|+.+++++.+|++.+++++.+ .+++++++++||
T Consensus 764 ~elL~ll--l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~--~~~~~I~L~nPnh 839 (1082)
T PLN02672 764 LALFNKL--VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLET--VKKPWVYISGPTI 839 (1082)
T ss_pred HHHHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc--CCCCEEEEECcCC
Confidence 8888777 77788999999999999999999999999999999985445789999999999862 134578888997
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCccc---HHHHH-Hhhhc--CCeEEEEecccccccccCCcc
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKD---AQAIR-IFLED--EHLIGCAQSYAKSMGLYGHRV 279 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~---~~~~~-~~~~~--~~~~i~~~s~SK~~g~~G~Rv 279 (435)
||||.+++.+++++|+++|++|+++||+||+|.++.|++.... ..+.. .+... ..++++++||||.++++|+|+
T Consensus 840 NPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRI 919 (1082)
T PLN02672 840 NPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEF 919 (1082)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHh
Confidence 9999999999999999999999999999999998888642110 11111 11111 247999999999999999999
Q ss_pred cEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHh---CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013839 280 GCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATIL---SDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL 356 (435)
Q Consensus 280 G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l---~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 356 (435)
||++ +++++ +++.+.+.... ..+....|.++..++ .+. ...|.+++++.++.++++++.+.+.|+++
T Consensus 920 GylI--ap~~e----Li~~l~~~~~~--s~~~~~~q~Aaaaalall~~~--~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 920 GFLA--LNDSV----LIDAFHSAPGL--SRPHSTLKYTIKKLLGLKNQK--SSDLLDGVAEQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred eeEE--eCCHH----HHHHHHHhhhh--cCCCcHHHHHHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9996 44566 77777664322 223334455544443 210 01255778899999999999999999988
Q ss_pred CCCCCccccccCcceeEecCC---------------------CH-HHHHHHhhhccEEEeCC---C-----cEEeccCCC
Q 013839 357 GSSLNWEHITNQLGMFCFSGL---------------------TP-YQVDRLAKEFHIYMTQD---G-----RISMAGVTT 406 (435)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~~~~---------------------~~-~~~~~ll~~~gI~i~pg---g-----Ris~~~~~~ 406 (435)
+ +.+.+++||||+|+.+ +. ++.+.++++.||.+.|| | ||+++. ++
T Consensus 990 G----i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~-~~ 1064 (1082)
T PLN02672 990 G----WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL-ED 1064 (1082)
T ss_pred C----CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-CH
Confidence 6 5688899999999842 22 35577877789999997 2 999986 88
Q ss_pred CcHHHHHHHHHHHHH
Q 013839 407 GNVNYLANAIHEVTR 421 (435)
Q Consensus 407 e~i~~~~~~l~~~l~ 421 (435)
+++++++++|+++.+
T Consensus 1065 e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1065 SEFDRALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999998654
No 83
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-39 Score=315.34 Aligned_cols=317 Identities=15% Similarity=0.145 Sum_probs=245.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
.++++|+|+.|++ +. ++++. +.+++.... ....|++ .+.++||+++++++ +. .+++|+ +++|++
T Consensus 50 ~~~~~i~l~~n~~-p~---~~~~~-v~~a~~~~~--~~~~Yp~-~~~~~lr~~ia~~~-~~-----~~~~I~--~t~Ga~ 113 (380)
T PLN03026 50 KPEDIVKLDANEN-PY---GPPPE-VLEALGNMK--FPYVYPD-PESRRLRAALAEDS-GL-----ESENIL--VGCGAD 113 (380)
T ss_pred CccceEEccCCCC-CC---CCCHH-HHHHHHhhH--hhccCCC-CCHHHHHHHHHHHh-Cc-----ChhhEE--EcCCHH
Confidence 3568999999984 11 23333 444443321 1244765 46899999999998 32 267888 899999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++.++ +..++.+||+|++++|+|+.|...++..|++++.++. .+++++|+++|++.+.. ++++++++++||||
T Consensus 114 ~~i~~~--~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~--~~~~~v~l~~P~NP 187 (380)
T PLN03026 114 ELIDLL--MRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPR--TPDFSLDVPRIVEAVET--HKPKLLFLTSPNNP 187 (380)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHHhc--cCCcEEEEeCCCCC
Confidence 999888 6667889999999999999999999999999999987 34578999999998832 56899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|++.+ +++|+||+|.+|.+.+ .. .. ..+..+++++++||||.||++|+|+||+++
T Consensus 188 TG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~---~~--~~-~~~~~~~viv~~SfSK~~glaGlRiGy~~~--- 254 (380)
T PLN03026 188 DGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE---SR--MK-WVKKYDNLIVLRTFSKRAGLAGLRVGYGAF--- 254 (380)
T ss_pred CCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc---ch--HH-HHHhCCCEEEEecchHhhcCccccceeeec---
Confidence 99999999888888753 8999999999987642 11 11 223457899999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+... ..+.+.++|.++.++|.+. +++++.++.++++++.+.+.|+.++. +. ..+
T Consensus 255 ~~~----~i~~l~~~~~--~~~~~~~~q~aa~~aL~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~~---~~-~~p 317 (380)
T PLN03026 255 PLS----IIEYLWRAKQ--PYNVSVAAEVAACAALSNP-------KYLEDVKNALVEERERLFGLLKEVPF---LE-PYP 317 (380)
T ss_pred CHH----HHHHHHHhcC--CCCCCHHHHHHHHHHhhCH-------HHHHHHHHHHHHHHHHHHHHHHHCCC---Ce-ECC
Confidence 888 8888877654 2567889999999999764 56778888999999999999998863 22 356
Q ss_pred CcceeEecCC----CHHHH-HHHhhhccEEEeCC------C--cEEeccCCCCcHHHHHHHHHHH
Q 013839 368 QLGMFCFSGL----TPYQV-DRLAKEFHIYMTQD------G--RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 368 ~~g~~~~~~~----~~~~~-~~ll~~~gI~i~pg------g--Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
.+++|+|+.+ +.+.+ +.+ .++||.++++ + |||++ +.+++++++++|+++
T Consensus 318 ~~~~f~~~~~~~~~~~~~~~~~l-~~~gI~v~~~~~~~~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 318 SDANFILCRVTSGRDAKKLKEDL-AKMGVMVRHYNSKELKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred CCCeEEEEECCCCCCHHHHHHHH-HHCCeEEEECCCCCCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 7788998865 33444 555 4789999876 1 99985 456778888887653
No 84
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-40 Score=316.86 Aligned_cols=319 Identities=14% Similarity=0.119 Sum_probs=248.4
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
.+.|+|+.|++ .. .+++ .+.+++..... ...|.|..|.+++|+++++++ +. ++++|+ +|+|++++
T Consensus 29 ~~~i~l~~n~~-~~---~~~~-~v~~a~~~~~~--~~~~~p~~g~~~lr~~ia~~~-~~-----~~~~i~--~t~G~~~~ 93 (359)
T PRK03158 29 EKIVKLASNEN-PY---GPSP-KVKEAIAAHLD--ELALYPDGYAPELRTKVAKHL-GV-----DEEQLL--FGAGLDEV 93 (359)
T ss_pred CceEEecCCCC-CC---CCCH-HHHHHHHHHHH--HhhcCCCCcHHHHHHHHHHHh-CC-----CHHHEE--ECCCHHHH
Confidence 47899999985 22 2233 34444433322 234666789999999999998 32 267888 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ +.+++++||+|++++|+|+.+...+...|++++.+++. ++++|++.+++.+. ++++++++++||||||
T Consensus 94 l~~~--~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~---~~~~~v~i~~p~NPtG 165 (359)
T PRK03158 94 IQMI--SRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAID---EQTKIVWICNPNNPTG 165 (359)
T ss_pred HHHH--HHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcC---CCCCEEEEeCCCCCCC
Confidence 9887 66678899999999999999999999999999999983 46899999998886 5778999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.+++.++++.|+ +++++|+||+|.++.+++.. ...+.. .+..+++++++||||.+|++|+|+||+++ ++
T Consensus 166 ~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~--~~~~~~-~~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~~ 238 (359)
T PRK03158 166 TYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDY--PDTLPL-LEKYENLIVLRTFSKAYGLAALRVGYGIA---SE 238 (359)
T ss_pred CCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCccc--ccHHHH-HHhcCCEEEEEechHhhcCcchhhehhcC---CH
Confidence 9999999999888774 69999999999998875321 112222 23456899999999999999999999974 78
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+.+... ..+.+.++|.++..+|.+. ++.++.++.++++++.+.+.|++.+ +.+. +.+
T Consensus 239 ~----~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~-~~~ 300 (359)
T PRK03158 239 E----LIEKLNIARP--PFNTTRIAQYAAIAALEDQ-------AFLKECVEKNAEGLEQYYAFCKEYG----LFYY-PSQ 300 (359)
T ss_pred H----HHHHHHHhcC--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CeeC-CCc
Confidence 8 7887877543 3568999999999999764 4566677778888888889988875 3444 445
Q ss_pred ceeEecCC--CHH-HHHHHhhhccEEEeCC---C-----cEEeccCCCCcHHHHHHHHHHH
Q 013839 370 GMFCFSGL--TPY-QVDRLAKEFHIYMTQD---G-----RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 370 g~~~~~~~--~~~-~~~~ll~~~gI~i~pg---g-----Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
|+|+|+.+ +.+ +.+.+ .++||.+.|| | ||+++ +.+++++++++|+++
T Consensus 301 g~~i~~~~~~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 301 TNFIFVDTGRDANELFEAL-LKKGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred CcEEEEECCCCHHHHHHHH-HHCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 78999966 334 44555 4689999997 2 99985 578889999998875
No 85
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-39 Score=314.34 Aligned_cols=320 Identities=14% Similarity=0.093 Sum_probs=249.4
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchh
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTG 128 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~ 128 (435)
+.++|+|+.|++ .+++++..++.+...+.......|++ .|.++||+++++++. ... +++|+ +++|+++
T Consensus 25 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~-~~~----~~~I~--~t~G~~~ 92 (356)
T PRK04870 25 ATGMVKLDAMEN----PYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG-VPA----GADVL--LGNGSDE 92 (356)
T ss_pred CCCceeCcCCCC----CCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC-cCC----CCcEE--EcCCHHH
Confidence 458999999984 23455555555555554433566887 688999999999983 221 24777 8999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT 208 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt 208 (435)
++.++ +..++.+||+|++++|+|..+...++..|++++.+++ ++++++|++.+++.+.+ .+++++++++|||||
T Consensus 93 ~i~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~--~~~~~~d~~~l~~~~~~--~~~~~v~l~~p~NPt 166 (356)
T PRK04870 93 LIQLL--ALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPL--TADFTLDLPAMLAAIAE--HRPALVFLAYPNNPT 166 (356)
T ss_pred HHHHH--HHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCCEEEEcCCCCCC
Confidence 98888 6666789999999999999999999999999999998 34589999999999863 367899999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecC
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVD 288 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~ 288 (435)
|.+++.+++++|+++| +.++|+||+|.+|.+.. ..+. . ...+++++++|||| ++++|+|+||+++ +
T Consensus 167 G~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~---~~~~---~-~~~~~vi~~~S~SK-~~~~GlRiG~~i~---~ 232 (356)
T PRK04870 167 GNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS---WLPR---L-ARFPNLLVMRTVSK-LGLAGLRLGYLAG---H 232 (356)
T ss_pred CCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc---hHHH---H-hhCCCEEEEecchh-hhhHHHhhhhhhC---C
Confidence 9999999999999998 67899999999886532 1111 1 33468999999999 8999999999974 7
Q ss_pred hhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC
Q 013839 289 SKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ 368 (435)
Q Consensus 289 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 368 (435)
++ +++.+.+... ..+.+.++|.++..++.+. +.+++.+++++++++.+.+.|++++. +.+. +.
T Consensus 233 ~~----~i~~~~~~~~--~~~~~~~~q~~a~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~-~~ 295 (356)
T PRK04870 233 PA----WIAELDKVRP--PYNVNVLTQATALFALEHV-------DVLDAQAAQLRAERTRLAAALAALPG---VTVF-PS 295 (356)
T ss_pred HH----HHHHHHHccC--CCcCCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHHHhCCC---cEEC-CC
Confidence 87 8887777542 3467888998888888753 34667778889999999999988732 4443 55
Q ss_pred cceeEecCC-CHHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHH
Q 013839 369 LGMFCFSGL-TPYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 369 ~g~~~~~~~-~~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
+|+|+|+.+ +.+.+...++++||.+.++. ||+++ +.+++++++++|+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~ 355 (356)
T PRK04870 296 AANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAA 355 (356)
T ss_pred CCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHh
Confidence 677999987 34555556678999998761 99985 467788999988765
No 86
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-39 Score=313.39 Aligned_cols=336 Identities=14% Similarity=0.158 Sum_probs=257.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
...+.|+|+.|.+ ..++++...+.+...+..+....|++..|.+++|+++++++ +.. +++++ +++|++
T Consensus 26 ~~~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l-~~~-----~~~v~--~~~g~t 93 (380)
T PRK06225 26 KDKEMIWMGQNTN----HLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL-GLD-----DDEAL--ITAGAT 93 (380)
T ss_pred hcCCeEEccCCCC----CCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc-CCC-----CCcEE--EeCCHH
Confidence 3468999999873 22334344443333433333456999999999999999997 332 56888 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecC-CCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYD-PDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN 206 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N 206 (435)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+++.+ ++++.+|++.+++.+. ++++++++++|+|
T Consensus 94 ~al~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~N 168 (380)
T PRK06225 94 ESLYLV--MRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD---ENTRLIYLIDPLN 168 (380)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC---CCceEEEEeCCCC
Confidence 999988 666788999999999999999888899999999998732 3357899999999887 5688999899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
|||.+++.+++++|+++|++||+++|+||+|.+|..+. ...... ..++++++.||||.+|++|+|+||+++
T Consensus 169 ptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-----~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~-- 239 (380)
T PRK06225 169 PLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH-----TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVA-- 239 (380)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC-----Cchhhc--CCCCEEEEeechhhcCCccceeEEEec--
Confidence 99999999999999999999999999999998776432 111111 236799999999999999999999974
Q ss_pred cChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
+++ +++.+..... ...+.+.++|.++...+.... ++.++.++.++++++.+.+.|+++... .+.. .
T Consensus 240 -~~~----l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~-~ 305 (380)
T PRK06225 240 -TPD----LIEVVKSIVI-NDLGTNVIAQEAAIAGLKVKD------EWIDRIRRTTFKNQKLIKEAVDEIEGV-FLPV-Y 305 (380)
T ss_pred -CHH----HHHHHHHHHh-cccCCCHHHHHHHHHHHhcch------HHHHHHHHHHHHHHHHHHHHHHhCcCC-cccc-C
Confidence 788 7777776543 345678889988888886532 556667777888888888999875310 1222 3
Q ss_pred cCcceeEecCC-----CHHHHHHHhhhccEEEeCC-------C----cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 367 NQLGMFCFSGL-----TPYQVDRLAKEFHIYMTQD-------G----RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 367 ~~~g~~~~~~~-----~~~~~~~ll~~~gI~i~pg-------g----Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
+.+|+|+|+.+ +.+.+...+.++||.+.|| | |++++. +++++++++++|++++++.+
T Consensus 306 ~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 306 PSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred CCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHhh
Confidence 45566778754 4444443345789999886 2 999976 78999999999999998665
No 87
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-39 Score=314.83 Aligned_cols=317 Identities=18% Similarity=0.182 Sum_probs=243.2
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
+++|+|+.|++ +. ++ ++.+.+++.+........|++. |.++||+++++++ +. ++++|. +|+|++++
T Consensus 24 ~~~i~l~~~~~-~~---~~-~~~~~~a~~~~~~~~~~~y~~~-~~~~lr~aia~~~-~~-----~~~~I~--it~G~~~a 89 (353)
T PRK05387 24 AKLIKLNTNEN-PY---PP-SPKVLEAIRAALGDDLRLYPDP-NADALRQAIAAYY-GL-----DPEQVF--VGNGSDEV 89 (353)
T ss_pred cceeeccCCCC-CC---CC-CHHHHHHHHHHhhhhhhcCCCC-cHHHHHHHHHHHh-CC-----CHHHEE--EcCCHHHH
Confidence 57899999995 21 22 3344444444332224568665 6699999999998 32 367888 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ +.+++.+||+|++++|+|+.|...++..|++++.+++ .+++++|++.+++ .++++++++||||||
T Consensus 90 l~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~-------~~~~v~~~~P~NPtG 158 (353)
T PRK05387 90 LAHA--FLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPL--DDDFSIDVEDYLR-------PNGGIIFPNPNAPTG 158 (353)
T ss_pred HHHH--HHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeec--CCCCCCCHHHHHh-------cCCEEEEeCCCCCCC
Confidence 9998 6777899999999999999999999999999999988 3457899998863 236788999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.+++++|++.++ ++++|+||+|.+|... ...+. .+..+++++++||||.+|++|+|+||+++ ++
T Consensus 159 ~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~----~~~~~---~~~~~~~i~~~S~SK~~~~~GlR~G~~~~---~~ 226 (353)
T PRK05387 159 IALPLAEIERILAANP--DSVVVIDEAYVDFGGE----SAIPL---IDRYPNLLVVQTFSKSRSLAGLRVGFAIG---HP 226 (353)
T ss_pred CCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc----chHHH---HhhCCCEEEEEehhHhhcchhhhceeeec---CH
Confidence 9999999999988654 8999999999876421 11222 23346799999999999999999999964 88
Q ss_pred hHHHHHHHHHHHHhhcc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC
Q 013839 290 KQAAAIRSQIQQIARAM-YGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ 368 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 368 (435)
+ +++.+++..... ..+++.++|.++..++.+. ++.++.+++++++++.+.+.|+++| +.+. +.
T Consensus 227 ~----~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~ 290 (353)
T PRK05387 227 E----LIEALNRVKNSFNSYPLDRLAQAGAIAAIEDE-------AYFEETRAKVIATRERLVEELEALG----FEVL-PS 290 (353)
T ss_pred H----HHHHHHHhhccCCCCCcCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CeEC-CC
Confidence 8 878777765432 3467889999998888764 4556778889999999999999886 3443 45
Q ss_pred cceeEecCC---CHHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 369 LGMFCFSGL---TPYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 369 ~g~~~~~~~---~~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
+++|+|+.+ +.+.+.+.+.++||.+.+.+ |++++ +.+++++++++|++++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 291 KANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEILA 352 (353)
T ss_pred cCcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence 677888865 44444334467899996542 99985 56889999999988764
No 88
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-39 Score=313.73 Aligned_cols=322 Identities=15% Similarity=0.127 Sum_probs=250.8
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchh
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTG 128 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~ 128 (435)
....++|+.|++ +.++++.+++.+.+.+. . ...|+++ +.++||++|++++ +. ++++|+ +++|+++
T Consensus 31 ~~~~~~l~~~~~----~~~~~~~~~~a~~~~~~-~-~~~Y~~~-~~~~Lr~~ia~~~-~~-----~~~~I~--it~G~~~ 95 (369)
T PRK08153 31 RPFRARIGANES----GFGPSPSVIAAMREAAA-E-IWKYGDP-ENHDLRHALAAHH-GV-----APENIM--VGEGIDG 95 (369)
T ss_pred CcceeEecCCCC----CCCCCHHHHHHHHHHHH-H-hhcCCCC-ccHHHHHHHHHHh-CC-----CHHHEE--EcCCHHH
Confidence 345679999994 23445555444444432 2 3458876 5799999999998 32 267888 9999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT 208 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt 208 (435)
++.++ +..++.+||.|++++|+|+.+...+...|++++.+|. +++ ++|++++++.+.. .+++++++++|||||
T Consensus 96 ~l~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~-~~~--~~~~~~l~~~~~~--~~~~~i~l~~P~NPt 168 (369)
T PRK08153 96 LLGLI--VRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPY-RDD--REDLDALLDAARR--ENAPLVYLANPDNPM 168 (369)
T ss_pred HHHHH--HHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeC-CCC--CCCHHHHHHHhcc--cCCcEEEEeCCCCCC
Confidence 99888 6666889999999999999999888899999999987 232 6889988877642 467899999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecC
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVD 288 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~ 288 (435)
|.+++.+++++|++.|++ +++||+||+|.++.+++ ...++ ....+++++++||||.+|++|+|+||+++ +
T Consensus 169 G~~~~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~---~~~~~---~~~~~~~i~~~SfSK~~g~~GlRiG~~v~---~ 238 (369)
T PRK08153 169 GSWHPAADIVAFIEALPE-TTLLVLDEAYCETAPAG---AAPPI---DTDDPNVIRMRTFSKAYGLAGARVGYAIG---A 238 (369)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEeCchhhhcCcc---cchhh---hhcCCCEEEEecchHhccCcchheeeeec---C
Confidence 999999999999998874 89999999999988653 12222 22346899999999999999999999974 8
Q ss_pred hhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC
Q 013839 289 SKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ 368 (435)
Q Consensus 289 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 368 (435)
++ +++.+.+... ..+.+.++|.++..+|.+. +++++.++.++++++.+.+.|+..|. ... +.
T Consensus 239 ~~----~~~~l~~~~~--~~~~s~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~~~~~L~~~g~----~~~-p~ 300 (369)
T PRK08153 239 PG----TIKAFDKVRN--HFGMNRIAQAAALAALKDQ-------AYLAEVVGKIAAARDRIAAIARANGL----TPL-PS 300 (369)
T ss_pred HH----HHHHHHHhhc--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCCC----ccC-CC
Confidence 88 8887877554 3568899999999999754 55677888899999999999988763 333 57
Q ss_pred cceeEecCCC-----HHHH-HHHhhhccEEEe-CC-----C--cEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 369 LGMFCFSGLT-----PYQV-DRLAKEFHIYMT-QD-----G--RISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 369 ~g~~~~~~~~-----~~~~-~~ll~~~gI~i~-pg-----g--Ris~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
+++|+|+.+. .+.+ +.+ .++||.++ |+ + ||+++ +++++++++++|++++...
T Consensus 301 ~~~f~~~~~~~~~~~a~~l~~~l-~~~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 301 ATNFVAIDCGRDGAFARAVLDGL-IARDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEALEAA 366 (369)
T ss_pred cCcEEEEECCCCcccHHHHHHHH-HHCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 7889998652 2333 444 46899995 53 1 99985 5789999999999988644
No 89
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.8e-39 Score=309.65 Aligned_cols=336 Identities=14% Similarity=0.114 Sum_probs=249.1
Q ss_pred CchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcccc
Q 013839 35 DPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVK 114 (435)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~ 114 (435)
..+.....++.. +..++++|+.|++ + .++|+.+++++...+. . ...|++ .+.+++|+++++++ +. +
T Consensus 6 ~~~~~~~~~~~~-~~~~~i~l~~~~~-~---~~~p~~~~~a~~~~~~-~-~~~y~~-~~~~~lr~~ia~~~-~~-----~ 71 (356)
T PRK08056 6 GNIREAATVLGI-SPDQLLDFSANIN-P---LGMPVSLKRAIIDNLD-C-AERYPD-VEYRHLHQALARHH-QV-----P 71 (356)
T ss_pred ccHHHHHHHhCC-ChhhEEEeccccC-C---CCCCHHHHHHHHHHHH-h-cccCcC-ccHHHHHHHHHHHh-Cc-----C
Confidence 334455555532 4568999999984 2 2444444444433332 2 235866 46899999999997 32 2
Q ss_pred CCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCC
Q 013839 115 EGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPD 194 (435)
Q Consensus 115 ~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~ 194 (435)
+++|+ +++|+++++.++ +.. +.+|+ +++++|+|..|...++..|++++.+|+.+++++.+| +++++.+. +
T Consensus 72 ~~~i~--it~Ga~~~l~~~--~~~-l~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~---~ 141 (356)
T PRK08056 72 ASWIL--AGNGETESIFAV--VSG-LKPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT---P 141 (356)
T ss_pred hhhEE--ECCCHHHHHHHH--HHH-hCCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc---C
Confidence 67888 999999998887 443 36776 777899999999999999999999998434456666 45556565 5
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccc
Q 013839 195 SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGL 274 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~ 274 (435)
+++++++++||||||.+++.+++++|+++|++|+++||+||+|.+|.+++ ... +..+ ...+++++++||||.||+
T Consensus 142 ~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~--~~~~-~~~~~~i~~~S~SK~~~~ 216 (356)
T PRK08056 142 DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE--TGF--IPQL-ADNPHLWVLRSLTKFYAI 216 (356)
T ss_pred CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc--hHH--HHHh-ccCCCEEEEEechhhccC
Confidence 78899999999999999999999999999999999999999999988643 111 1122 234689999999999999
Q ss_pred cCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 275 YGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLE 354 (435)
Q Consensus 275 ~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 354 (435)
+|+|+||++ +++++ +++.+++.. ...+++.++|.++..++.+. .+.++.+++++++++.+.+.|+
T Consensus 217 ~G~RiG~~v--~~~~~----~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~ 281 (356)
T PRK08056 217 PGLRLGYLV--NSDDA----AVARMRRQQ--MPWSINAFAALAGEVILQDR-------AYQQATWQWLAEEGARFYQALC 281 (356)
T ss_pred cchhheeee--cCCHH----HHHHHHHhC--CCCchhHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHh
Confidence 999999996 33556 666676543 33567778898888888654 4567788899999999999998
Q ss_pred hhCCCCCccccccCcceeEecCC--C-HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 355 KLGSSLNWEHITNQLGMFCFSGL--T-PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 355 ~~~~~~~~~~~~~~~g~~~~~~~--~-~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
.++. +.+.++ +|+|+|+.+ + .++...+ .++||.+.+|. ||+++ +.++.+.++++|+++++
T Consensus 282 ~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~l-~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 282 ALPL---LTVWPG-RANYLFLRCERPDIDLQRAL-LTQRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNVLT 354 (356)
T ss_pred cCCC---cEEcCC-CCcEEEEEcCCChHHHHHHH-HHCCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHHHc
Confidence 7742 444444 678899976 3 3344555 46899998761 99985 46778889999887653
No 90
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-39 Score=305.01 Aligned_cols=321 Identities=18% Similarity=0.211 Sum_probs=258.1
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
+++++|+.++ ++ .+++ +.+.+++..... ..+.|+++ ...++++++++++.... +++|. +.+|+++.
T Consensus 22 ~~~i~LssNe--nP--~gp~-~~~~~~~~~~~~-~~~rYPd~-~~~~l~~a~a~~~~~~~-----~~~V~--~gnGsde~ 87 (356)
T COG0079 22 PGIIKLSSNE--NP--YGPP-PKVIEAIRAALD-KLNRYPDP-DYRELRAALAEYYGVVD-----PENVL--VGNGSDEL 87 (356)
T ss_pred ccceeecCCC--CC--CCCC-HHHHHHHHHHHH-hhccCCCC-cHHHHHHHHHHHhCCCC-----cceEE--EcCChHHH
Confidence 3799999998 32 2333 333333333332 25668876 68899999999984322 57888 89999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ +.+++.+||+|+++.|+|..|...++..|++++.++.. + |.+|++.+.+.+. ++++++++||||||||
T Consensus 88 i~~l--~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~--~-~~~d~~~~~~~~~---~~~~lv~i~nPNNPTG 159 (356)
T COG0079 88 IELL--VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLK--E-FRLDLDAILAAIR---DKTKLVFLCNPNNPTG 159 (356)
T ss_pred HHHH--HHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEeccc--c-cccCHHHHHHhhh---cCCCEEEEeCCCCCCC
Confidence 9999 77788999999999999999999999999999999983 3 8899999999998 5789999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
..++.++++++.+.+.+ +.+||+||+|.+|... ..+... ...+++++++||||.||++|+|+||+++ ++
T Consensus 160 ~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~------~~~~l~-~~~~nlivlRTfSKa~gLAGlRlGy~ia---~~ 228 (356)
T COG0079 160 TLLPREELRALLEALPE-GGLVVIDEAYIEFSPE------SSLELL-KYPPNLIVLRTFSKAFGLAGLRVGYAIA---NP 228 (356)
T ss_pred CCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc------hhhhhc-cCCCCEEEEEecHHhhhcchhceeeccC---CH
Confidence 99999999999999999 9999999999999852 122222 2567899999999999999999999864 88
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+++... .++.+.+++.++.++|.+. +++++.+++..+.++.+.+.|+.+|. ..+.+.+
T Consensus 229 ~----~i~~l~~vr~--p~~v~~~a~~aa~aal~~~-------~~~~~~~~~~~~~r~rl~~~l~~~~~---~~v~pS~- 291 (356)
T COG0079 229 E----LIAALNKVRP--PFNVSSPALAAAIAALRDA-------DYLEESVERIREERERLYAALKALGL---FGVFPSQ- 291 (356)
T ss_pred H----HHHHHHHhcC--CCCCCHHHHHHHHHHcccH-------HHHHHHHHHHHHHHHHHHHHHHhCCC---CeecCCC-
Confidence 8 9999998643 3578899999999999875 78889999999999999999999873 2244444
Q ss_pred ceeEecCCC---HHHHHHHhhhccEEEeCC---C------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 370 GMFCFSGLT---PYQVDRLAKEFHIYMTQD---G------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 370 g~~~~~~~~---~~~~~~ll~~~gI~i~pg---g------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
+.|+++.+. ...+.+.|.++||.++.. + ||+++. +++.++++++|+++++.
T Consensus 292 aNFvlv~~~~~~~~~l~~~L~~~giivR~~~~~~~~~~~lRitvgt--~een~~ll~AL~~~~~~ 354 (356)
T COG0079 292 ANFVLVRVPDAEAAALAEALLKKGILVRDCSSVGLLPGYLRITVGT--PEENDRLLAALREVLKG 354 (356)
T ss_pred CcEEEEECCCccHHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeCC--HHHHHHHHHHHHHHHhc
Confidence 568888763 234544455689999865 1 999954 56669999999988764
No 91
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=6.4e-39 Score=309.99 Aligned_cols=323 Identities=13% Similarity=0.074 Sum_probs=235.6
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
...++|+|+.|+. ..++++.+++++...+. . ...|++.. .++||++|++++ + +++++|+ +|+|++
T Consensus 20 ~~~~~i~l~~~~n----~~~~~~~~~~a~~~~~~-~-~~~Y~~~~-~~~Lr~aia~~~-~-----v~~~~I~--it~G~~ 84 (360)
T PRK07392 20 PPDAILDFSASIN----PLGPPESVIAAIQSALS-A-LRHYPDPD-YRELRLALAQHH-Q-----LPPEWIL--PGNGAA 84 (360)
T ss_pred CcccEEEeCCcCC----CCCCCHHHHHHHHHHHH-H-hhcCCCcC-HHHHHHHHHHHh-C-----cChhhEE--ECCCHH
Confidence 3457899999973 22444444444433332 2 45688754 689999999998 3 2377998 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCC---CcChHhHHHHhhcCCCCcEEEEeCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSK---SLDFAALMDDIKNAPDSSFFLLHPSA 204 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~---~~d~e~l~~~i~~~~~~~~~v~~~~p 204 (435)
+++.++ +.. +.+||+|++++|+|..|...++..|++++.+++.++.++ ..+++++++.. +++++++++||
T Consensus 85 ~~i~~~--~~~-l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~nP 157 (360)
T PRK07392 85 ELLTWA--GRE-LAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL----TPNDGLLLNNP 157 (360)
T ss_pred HHHHHH--HHH-hCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc----cCCCEEEEeCC
Confidence 999887 444 457899999999999999999999999999998433322 23555554432 35789999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 205 HNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 205 ~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
|||||.++++++ |.++++++++ +|+||+|.+|.+++. ..+.....+..+++++++||||.||++|+|+||+++
T Consensus 158 ~NPTG~~~~~~~---l~~l~~~~~~-~IiDE~y~~~~~~~~---~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~ 230 (360)
T PRK07392 158 HNPTGKLWSREA---ILPLLEQFAL-VVVDEAFMDFLPPDA---EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA 230 (360)
T ss_pred CCCCCCCcCHHH---HHHHHHHCCE-EEEECchhhhccCcc---ccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC
Confidence 999999999775 5555667785 666999999987531 122222234457899999999999999999999974
Q ss_pred EecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc
Q 013839 285 LCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEH 364 (435)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 364 (435)
+++ +++.+.+.. ...+++.++|.++..+|.+. .+.+..++.++++++.+.+.|+.++. +.+
T Consensus 231 ---~~~----~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~ 291 (360)
T PRK07392 231 ---HPD----RLQRWQQWR--DPWPVNGLAAAAAIAALADR-------DFQQQTWAWLPPAREALFQGLASLPG---LTP 291 (360)
T ss_pred ---CHH----HHHHHHhhC--CCCCCCHHHHHHHHHHhccH-------HHHHHHHHHHHHHHHHHHHHHHhCCC---cEE
Confidence 777 777776543 23578999999999999864 34455667788889999999987632 444
Q ss_pred cccCcceeEecCC--C-HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 365 ITNQLGMFCFSGL--T-PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 365 ~~~~~g~~~~~~~--~-~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
. +.+++|+|+.+ + .++...+++++||.+.||. ||+++. .++.+++.++|++++.
T Consensus 292 ~-~~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 292 L-PSAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAILA 358 (360)
T ss_pred C-CCCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhh
Confidence 4 47789999876 2 3455676777899999871 999965 3444666666665543
No 92
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-39 Score=294.14 Aligned_cols=323 Identities=15% Similarity=0.130 Sum_probs=264.2
Q ss_pred CCCCCCCcccHHHHHHHHHhHc-CCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhC
Q 013839 85 FLESISASVSTKMVEESVKLVY-GKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDA 163 (435)
Q Consensus 85 ~~~Y~~~~g~~~lr~~ia~~l~-~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~ 163 (435)
..||++++|.++|+..+..+.. ..+....++-++. +|+|.+.+++.+ +..++++||.|++..++|+.....++..
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdii--it~G~t~~l~~~--l~~~~N~gd~vlie~~ty~~AL~s~~a~ 168 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDII--ITNGNTDGLFKV--LRTLINRGDHVLIEEYTYPSALQSMEAL 168 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEE--EecCCchHHHHH--HHHhhcCCCceEEecccchHHHHhcccc
Confidence 4689999999999999999653 2233333344677 899999999999 8888999999999999999999999999
Q ss_pred CCCeeeeeecCCCCCCcChHhHHHHhhcC-------CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeecc
Q 013839 164 QIPERTYHYYDPDSKSLDFAALMDDIKNA-------PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 164 g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-------~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Dea 236 (435)
|+++++|++ |+ .|+++|.|++.+.+. +....++.+++.+||||..++.+++++|.++|++|+++||+||+
T Consensus 169 gv~~ipv~m-d~--~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 169 GVKIIPVKM-DQ--DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred CceEEeccc-cC--CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 999999987 34 389999999998763 12345778899999999999999999999999999999999999
Q ss_pred CCCccCCCCc------ccHHHHHHh----------hhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHH
Q 013839 237 YQGFASGDLD------KDAQAIRIF----------LEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQ 300 (435)
Q Consensus 237 y~~~~~~~~~------~~~~~~~~~----------~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~ 300 (435)
|..+.++..+ ....+...+ .+...+||...||||.++ ||+|+||+++ ++- +++++.
T Consensus 246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~---~~~----~l~ril 317 (472)
T KOG0634|consen 246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITG---NSL----FLKRIL 317 (472)
T ss_pred cceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeec---CHH----HHHHHh
Confidence 9888876311 111111111 234679999999999998 9999999975 777 777777
Q ss_pred HHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-ccccccCcceeEecCCC-
Q 013839 301 QIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLN-WEHITNQLGMFCFSGLT- 378 (435)
Q Consensus 301 ~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~- 378 (435)
......+.+++.++|.++.+.|+..+ .+.|.+++.+.+..|..++..+..+|.+. .|.. +.+.+|.+|+|+|+.++
T Consensus 318 ~~ae~~t~~pSg~sq~iv~a~l~~wg-qeG~~~wi~~l~~~Yt~Rrn~~l~Al~ky-lp~~~~~~~~P~aGmFiwv~i~~ 395 (472)
T KOG0634|consen 318 DLAEVATSGPSGFSQGIVYAMLKRWG-QEGFLRWIQHLRSSYTERRNALLSALDKY-LPKSVCEYHPPKAGMFIWVEIPY 395 (472)
T ss_pred hhcceeecCcccccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCeeEEecCCcceEEEEEecc
Confidence 77777888899999999999887653 45577899999999999999999999776 3344 67889999999999663
Q ss_pred ------------HHHHHHHhhhccEEEeCCC---------------cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 379 ------------PYQVDRLAKEFHIYMTQDG---------------RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 379 ------------~~~~~~ll~~~gI~i~pgg---------------Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
.+.+...+.++||.+.+|. |++++..+.|+++++++++..++++.-
T Consensus 396 ~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f 468 (472)
T KOG0634|consen 396 INFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHF 468 (472)
T ss_pred cccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHh
Confidence 2345556678999999882 999988889999999999999998754
No 93
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-38 Score=304.53 Aligned_cols=319 Identities=16% Similarity=0.174 Sum_probs=240.2
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
+..++|+.|++ +. +.|+..++.+.+.+.......|++. +.+++|+++++++ +. ++++|. +|+|++++
T Consensus 22 ~~~~~l~~~~~-~~---~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~-~~-----~~~~i~--it~G~~~~ 88 (351)
T PRK14807 22 PYKYKMDANET-PF---ELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC-SV-----VPTNIF--VGNGSDEI 88 (351)
T ss_pred CceeEccCCCC-CC---CCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh-CC-----CcccEE--EecCHHHH
Confidence 46789999995 32 4455555554444443335668764 4689999999997 32 267888 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ +.+++.+||+|++++|+|..+...++..|++++.+++ .+++++|++++++++.. .+++++++++||||||
T Consensus 89 l~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~--~~~k~v~l~~p~NPtG 162 (351)
T PRK14807 89 IHLI--MLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKL--KEDYTYDVGSFIKVIEK--YQPKLVFLCNPNNPTG 162 (351)
T ss_pred HHHH--HHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeec--CCCCCCCHHHHHHHhhc--cCCCEEEEeCCCCCCC
Confidence 9888 6667889999999999999999999999999999987 34578999999999862 3678999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.+++++++ ++++.++|+||+|.++. +. ...+. .+..+++|+++||||.+|++|+|+||+++ ++
T Consensus 163 ~~~~~~~l~~l~---~~~~~~~ivDe~y~~~~-~~---~~~~~---~~~~~~vi~~~S~SK~~~~~GlRiG~~v~---~~ 229 (351)
T PRK14807 163 SVIEREDIIKII---EKSRGIVVVDEAYFEFY-GN---TIVDV---INEFENLIVLRTLSKAFGLAGLRVGYAVA---NE 229 (351)
T ss_pred CCCCHHHHHHHH---HhCCCEEEEeCcchhhc-cc---chHHH---hhhCCCEEEEecchHhcccchhceeeeec---CH
Confidence 999988766665 45567899999998774 21 12221 23347899999999999999999999974 88
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+...+. ..+.+.++|.++..++.+. +.++..+.++++++.+.+.|++++. +.+. +.+
T Consensus 230 ~----~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~--------~~~~~~~~~~~~r~~l~~~l~~~~g---~~~~-~~~ 291 (351)
T PRK14807 230 N----ILKYLNLVKS--PYNINSLSQVIALKVLRTG--------VLKERVNYILNERERLIKELSKIPG---IKVY-PSK 291 (351)
T ss_pred H----HHHHHHHccC--CCCcCHHHHHHHHHHHhHH--------HHHHHHHHHHHHHHHHHHHHHhCCC---cEEC-cCC
Confidence 8 8888877543 3457889999999998742 2344555677888888888877532 4454 455
Q ss_pred ceeEecCC-CHHHHHHHhhhccEEEeCCC---------cEEeccCCCCcHHHHHHHHHHHH
Q 013839 370 GMFCFSGL-TPYQVDRLAKEFHIYMTQDG---------RISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 370 g~~~~~~~-~~~~~~~ll~~~gI~i~pgg---------Ris~~~~~~e~i~~~~~~l~~~l 420 (435)
|+|+|+.+ +.+.+.+.+.++||.+.+++ ||+++. .++.+++++.|++++
T Consensus 292 ~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 292 TNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVSS--CEANDYLINGLKELL 350 (351)
T ss_pred ccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHhh
Confidence 77899877 44555555567899997641 999954 566788888887653
No 94
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-38 Score=301.41 Aligned_cols=312 Identities=12% Similarity=0.134 Sum_probs=233.8
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
.+.+.|+|+.|++ + .++++..++.+.+.+..+....|++. |.++||+++++++.... +++++|+ +|+|++
T Consensus 17 ~~~~~i~l~~~~~-~---~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~--it~Ga~ 86 (335)
T PRK14808 17 EKRDRTYLALNEN-P---FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVS--VGNGAD 86 (335)
T ss_pred CCCceeEecCCCC-C---CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEE--EcCCHH
Confidence 3468999999995 2 25555565555555543323437654 89999999999995432 3488998 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++.++ +..+ |.|++++|+|+.|...++..|++++.+|+. + ++.++... + ..+++++++|||||
T Consensus 87 ~~i~~~--~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~~~~----~----~~~~~i~i~nP~NP 150 (335)
T PRK14808 87 EIIYVM--MLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLT-K-DLRIPEVN----V----GEGDVVFIPNPNNP 150 (335)
T ss_pred HHHHHH--HHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCC-C-cCCCChhH----c----cCCCEEEEeCCCCC
Confidence 999888 4443 789999999999999999999999999983 3 34443221 2 24589999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++++|+ +++++||+||+|.+|... ...+. ....+++++++||||.+|++|+|+||+++
T Consensus 151 TG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~----~~~~~---~~~~~~vi~~~S~SK~~~l~GlRvG~~v~--- 216 (335)
T PRK14808 151 TGHVFEREEIERIL----KTGAFVALDEAYYEFHGE----SYVDL---LKKYENLAVIRTFSKAFSLAAQRIGYVVS--- 216 (335)
T ss_pred CCCCcCHHHHHHHH----hcCCEEEEECchhhhcCC----chHHH---HHhCCCEEEEEechhhccCcccceEEEEe---
Confidence 99999999888876 479999999999988521 12221 22346899999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+... ..+.+.++|.++..++.+. ++.++.++.+.++++.+.+.|+++| +.+.++
T Consensus 217 ~~~----~~~~l~~~~~--~~~~~~~~q~a~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~~ 279 (335)
T PRK14808 217 SEK----FIDAYNRVRL--PFNVSYVSQMFAKVALDHR-------EIFEERTKFIVEERERMKSALREMG----YRITDS 279 (335)
T ss_pred CHH----HHHHHHHhcC--CCCCCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CEECCC
Confidence 788 8888877552 3567889999988888653 3445666777788889999998876 455666
Q ss_pred CcceeEecCC---CHHHHHHHhhhccEEEeCCC---cEEeccCCCCcHHHHHHHHHHH
Q 013839 368 QLGMFCFSGL---TPYQVDRLAKEFHIYMTQDG---RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 368 ~~g~~~~~~~---~~~~~~~ll~~~gI~i~pgg---Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
++ .|+|+.+ +.+.+...+.++||.++... ||+++. .++.++++++|+++
T Consensus 280 ~g-~f~~~~l~~~~~~~~~~~l~~~Gi~V~~~~~~~Risi~~--~~~~~~~~~~l~~~ 334 (335)
T PRK14808 280 RG-NFVFIFMEKEEKERLLEHLRAKNIAVRSFREGVRITIGK--REENDMILKELEVF 334 (335)
T ss_pred CC-eEEEEeCCCccHHHHHHHHHHCCeEEEECCCCeEEecCC--HHHHHHHHHHHHhh
Confidence 55 4778755 34455555567999998752 999854 57788888888753
No 95
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.3e-37 Score=297.31 Aligned_cols=306 Identities=12% Similarity=0.106 Sum_probs=233.1
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
.++|+|+.++ ++.+++. ..... .. ...|+... .+||+++++++ +.. .+++|+ +++|++++
T Consensus 24 ~~~i~ls~Ne--np~~~~~-~~~~~---~~-----~~~Yp~~~--~~L~~~ia~~~-~~~----~~~~I~--i~~Gs~e~ 83 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPV-PPVPA---DA-----WRRLPEDD--DGLAACAARYY-GAP----DAAHVL--PVAGSQAA 83 (339)
T ss_pred hhhceeccCC--CCCCCCC-CCCCH---HH-----HHhCCCch--HHHHHHHHHHh-CCC----CcccEE--ECcCHHHH
Confidence 5689999998 3222221 11111 11 23387643 89999999998 332 146888 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ ..++.+|| |++++|+|+.|...++..|++++.++.. . +. +. ...++++++|||||||
T Consensus 84 i~~l---~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~-~-------~~----~~---~~~~~v~l~nPnNPTG 144 (339)
T PRK06959 84 IRAL---PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEA-A-------DT----LP---AALTHLIVVNPNNPTA 144 (339)
T ss_pred HHHH---HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeeccc-c-------hh----cc---ccCCEEEEeCCCCCCC
Confidence 8765 33567877 8899999999999999999999988762 1 12 22 2346889999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.+++++|++.|++++.++|+||+|.++.+. .++..+.+ .+++++++||||.||++|+|+||+++ ++
T Consensus 145 ~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~------~s~~~~~~-~~~vi~l~SfSK~~gl~GlRiGy~v~---~~ 214 (339)
T PRK06959 145 ERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA------ASLAAHTD-RPGLVVLRSVGKFFGLAGVRAGFVLA---AP 214 (339)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc------ccchhccC-CCCEEEEecChhhcCCcchheEEEec---CH
Confidence 9999999999999999999999999999998643 12322322 46799999999999999999999974 88
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+.+... ..+.+.++|.++.++|.+. ++.++.+++++++++.+.+.|+++|. .+. .+
T Consensus 215 ~----li~~l~~~~~--~~~vs~~~q~a~~~~L~~~-------~~~~~~~~~~~~~r~~l~~~L~~~g~----~~~--~~ 275 (339)
T PRK06959 215 A----LLAALRDALG--AWTVSGPARHAVRAAFADA-------AWQAAMRERLAADGARLAALLRAHGF----AVH--AT 275 (339)
T ss_pred H----HHHHHHHhcC--CCCCcHHHHHHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHHHHCCC----Ccc--Cc
Confidence 8 8888888654 3457889999999999875 45667889999999999999999873 333 35
Q ss_pred ceeEecCC-CHHHHHHHhhhccEEEeCCC-----cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 370 GMFCFSGL-TPYQVDRLAKEFHIYMTQDG-----RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 370 g~~~~~~~-~~~~~~~ll~~~gI~i~pgg-----Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
++|+|+.+ +.+.+...|.++||.++..+ ||+++. +.+++++++++|+++++.+.
T Consensus 276 ~~f~~~~~~~~~~l~~~l~~~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 276 PLFSWTDDPRAAALHAALARRGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred ceEEEEeCCCHHHHHHHHHhCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHHHHh
Confidence 78999987 44445444567899998753 999865 67888999999998887654
No 96
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-38 Score=303.43 Aligned_cols=297 Identities=14% Similarity=0.137 Sum_probs=233.7
Q ss_pred CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCC-CEEEEcCCCChhhHHHHhhC
Q 013839 85 FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPE-SHIYFPDPTWSNHHNIWRDA 163 (435)
Q Consensus 85 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~ 163 (435)
...|+++. .++||+++++++ +. ++++|+ +++|+++++.++ +.+++.+| |+|++++|+|..|...++..
T Consensus 53 ~~~Y~~~~-~~~lr~~ia~~~-~~-----~~~~I~--~t~G~~~~l~~~--~~~~~~~g~~~vlv~~p~y~~~~~~~~~~ 121 (364)
T PRK04781 53 TRRYPDPQ-PPGLRSALAALY-GC-----APEQLL--IGRGSDEAIDLL--VRALCVPGRDAVLVTPPVFGMYAVCARLQ 121 (364)
T ss_pred hccCCCCC-HHHHHHHHHHHh-Cc-----ChHHEE--EeCCHHHHHHHH--HHHhcCCCCCeEEEcCCChHHHHHHHHHc
Confidence 45587764 689999999998 32 267888 999999999988 66677888 89999999999999888999
Q ss_pred CCCeeeeeecC-CCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccC
Q 013839 164 QIPERTYHYYD-PDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFAS 242 (435)
Q Consensus 164 g~~~~~v~~~~-~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~ 242 (435)
|++++.+|+.+ ++++.+|++++++.+.+ ++++++++++||||||.+++.++++++++.|++ +++||+||+|.+|.+
T Consensus 122 g~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~-~~~iI~Deay~~f~~ 198 (364)
T PRK04781 122 NAPLVEVPLVDGADGFHADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQIERALQALQG-KALVVVDEAYGEFSD 198 (364)
T ss_pred CCEEEEEecCCCccCCCcCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC-CcEEEEeCcchhhcC
Confidence 99999999742 23467789988765532 568899999999999999999999999998864 789999999999885
Q ss_pred CCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHh
Q 013839 243 GDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATIL 322 (435)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l 322 (435)
.. +.....+..+++++++||||+||++|+|+||+++ +++ +++.+.+... ..+.+.++|.++..+|
T Consensus 199 ~~------~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~---~~~----l~~~l~~~~~--~~~~~~~~~~~a~~~l 263 (364)
T PRK04781 199 VP------SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIA---NAE----LIAVLRRCQA--PYPVPTPCAALAEQAL 263 (364)
T ss_pred Cc------chHHHHhhCCCEEEEecChhhcccccceeeeeeC---CHH----HHHHHHhccC--CCCCCHHHHHHHHHHH
Confidence 32 1112224457899999999999999999999974 888 8888888654 3467888999988888
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC-CHHHHHHHhhhccEEEeCCC----
Q 013839 323 SDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL-TPYQVDRLAKEFHIYMTQDG---- 397 (435)
Q Consensus 323 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~ll~~~gI~i~pgg---- 397 (435)
.++. + +...+.+++++++++.+.+.|+.++. +....+.+|+|+|+.+ +.+.+.+.+.++||.++++.
T Consensus 264 ~~~~----~-~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~p~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~ 335 (364)
T PRK04781 264 SAPA----L-AVTARRVAEVRAERERLHAALAQLPG---VRRVYPSQGNFLLVRFDDAEAAFQALLAAGVVVRDQRAAPR 335 (364)
T ss_pred hccc----H-HHHHHHHHHHHHHHHHHHHHHHhCCC---CCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEeeCCCCCC
Confidence 7653 1 33445556788899999999988742 3333567789999987 44555555578999999861
Q ss_pred -----cEEeccCCCCcHHHHHHHHHHHH
Q 013839 398 -----RISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 398 -----Ris~~~~~~e~i~~~~~~l~~~l 420 (435)
||+++ +.++.++++++|+++.
T Consensus 336 ~~~~~Ris~~--~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 336 LSDALRITLG--TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CCCeEEEeCC--CHHHHHHHHHHHHHHH
Confidence 99985 4677788888887653
No 97
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.7e-37 Score=301.18 Aligned_cols=324 Identities=14% Similarity=0.114 Sum_probs=249.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
+..++++|+.|.+ +. .++ +.+.+++.+.... ...|++..+ +++|+++++++ +.. +++|+ +++|++
T Consensus 30 ~~~~~i~l~~~~~-~~---~~~-~~~~~a~~~~~~~-~~~y~~~~~-~~lr~~ia~~~-~~~-----~~~i~--~t~G~~ 94 (367)
T PRK02731 30 GIADIIKLASNEN-PL---GPS-PKAIEAIRAAADE-LHRYPDGSG-FELKAALAEKF-GVD-----PERII--LGNGSD 94 (367)
T ss_pred CCCceEEecCCCC-CC---CCC-HHHHHHHHHHHHh-hcCCCCCcH-HHHHHHHHHHh-CcC-----HHHEE--EcCCHH
Confidence 4567999999974 21 223 3333333332222 455877544 79999999998 322 56888 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++.++ +..++++||+|++++|+|..+...++..|++++.++. +++++|++.+++.+. ++++++++++||||
T Consensus 95 ~~l~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~---~~~~~v~l~~p~np 166 (367)
T PRK02731 95 EILELL--ARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVT---PRTRLVFIANPNNP 166 (367)
T ss_pred HHHHHH--HHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhC---CCCcEEEEeCCCCC
Confidence 998887 5666789999999999999998888899999998876 346899999999887 57789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.++++++++.|+ +++++|+||+|.++.+++. ...++. ..+..+++++++|+||.||++|+|+||+++
T Consensus 167 tG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~--~~~~~~-~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~--- 239 (367)
T PRK02731 167 TGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD--YEDGLE-LVAKFPNVVVTRTFSKAYGLAGLRVGYGIA--- 239 (367)
T ss_pred CCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC--cccHHH-HHhhcCCEEEEeeehHhhcCcccceeeeeC---
Confidence 999999999999998875 6999999999998887532 122332 224457899999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+... ..+.+.++|.++..++.+. ++.++.++.++++++.+.+.|++.|. .+. +
T Consensus 240 ~~~----~~~~l~~~~~--~~~~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g~----~~~-~ 301 (367)
T PRK02731 240 PPE----IIDALNRVRQ--PFNVNSLALAAAVAALDDD-------AFVEKSRALNAEGMAWLTEFLAELGL----EYI-P 301 (367)
T ss_pred CHH----HHHHHHHccC--CCCCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHHCCC----ccC-C
Confidence 777 7777776543 2456789999999999763 55677888889999999999988863 344 4
Q ss_pred CcceeEecCC----CHHHHHHHhhhccEEEeCC------C--cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 368 QLGMFCFSGL----TPYQVDRLAKEFHIYMTQD------G--RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 368 ~~g~~~~~~~----~~~~~~~ll~~~gI~i~pg------g--Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
.+|+|+|+.+ +.+.+.+.|.++||.+.++ + |++++ +.+++++++++|+++++
T Consensus 302 ~~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 302 SVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 4578899866 4444444445789999986 2 99985 56888999999988764
No 98
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-37 Score=298.10 Aligned_cols=310 Identities=17% Similarity=0.182 Sum_probs=233.2
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
.+.|+|+.|.+ + .++++.+++.+.+.+.......|++ .|.+++|+++++++. +++++|+ +|+|++++
T Consensus 18 ~~~i~l~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~~------~~~~~I~--~t~G~~~~ 84 (337)
T PRK03967 18 NYRIWLDKNEN-P---FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFYG------LDAENIA--VGNGSDEL 84 (337)
T ss_pred CceEEecCCCC-C---CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHhC------cCcceEE--EcCCHHHH
Confidence 46799999985 2 2444555555555554322456864 799999999999983 2367998 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ +.. + +||+|+++.|+|..|...++..|++++.+++ .+++++|++.+++.+ ++++++++++||||||
T Consensus 85 l~~~--~~~-~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~----~~~~~v~~~~P~NPtG 154 (337)
T PRK03967 85 ISYL--VKL-F-EGKHIVITPPTFGMYSFYAKLNGIPVIDVPL--KEDFTIDGERIAEKA----KNASAVFICSPNNPTG 154 (337)
T ss_pred HHHH--HHH-h-CCCeEEEeCCChHHHHHHHHHcCCeEEEeec--CCCCCcCHHHHHHhc----cCCCEEEEeCCCCCCC
Confidence 8776 332 3 7999999999999998888999999999988 335789999998764 3567888899999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.+++.+++ ++++++|+||+|.+|... ...+ ..+..+++|+++||||.||++|+|+||+++ ++
T Consensus 155 ~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~----~~~~---~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~---~~ 220 (337)
T PRK03967 155 NLQPEEEILKVL----ETGKPVVLDEAYAEFSGK----SLIG---LIDEYPNLILLRTFSKAFGLAGIRAGYAIA---NE 220 (337)
T ss_pred CCCCHHHHHHHH----hcCCEEEEECchhhhccc----chHH---HHhhCCCEEEEecchHhhcchhhhheeeec---CH
Confidence 999988666654 469999999999987632 1111 223346899999999999999999999974 78
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+.+.... .+.+.++|.++..+|++. +...+.++.+.++++.+.+.|.+.. .+.+
T Consensus 221 ~----~i~~~~~~~~~--~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~--------~~~~ 279 (337)
T PRK03967 221 E----IIDALYRIKPP--FSLNILTMKIVRLALDHY-------DLIEERIDYIIKERERVRRELGEYA--------YPSD 279 (337)
T ss_pred H----HHHHHHhhcCC--CCCCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHhccCc--------CCCC
Confidence 8 88888776542 467899999999999764 3344444555666777777776542 3577
Q ss_pred ceeEecCCCHHHHHHHhhhccEEEeCCC-------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 370 GMFCFSGLTPYQVDRLAKEFHIYMTQDG-------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 370 g~~~~~~~~~~~~~~ll~~~gI~i~pgg-------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
++|+|+.++ ..+.+ .++||.+++++ ||+++. .++.++++++|+++.+.
T Consensus 280 ~~~~~~~~~--~~~~l-~~~gi~v~~~~~~~~~~~Ri~~~~--~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 280 ANFLLLKLD--AYDYL-LENGIVVRKLSGRLEGHIRVTVGK--REENDEFIKALKEIKEG 334 (337)
T ss_pred CcEEEEhHH--HHHHH-HHCCEEEEeCCCCCCCeEEEecCC--HHHHHHHHHHHHHHHHh
Confidence 899998774 44555 45799997652 999854 56678888888876543
No 99
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-38 Score=302.14 Aligned_cols=310 Identities=16% Similarity=0.180 Sum_probs=237.8
Q ss_pred CeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHH
Q 013839 51 YKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGAC 130 (435)
Q Consensus 51 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~ 130 (435)
..|+|+.++. + .+++ +.+ .......|++.. ..++++++++++ +.+ +++|+ +++|+++++
T Consensus 29 ~~~~l~~Nen--p--~~~~-~~~-------~~~~~~~Yp~~~-~~~l~~~~a~~~-g~~-----~~~I~--~~~Gs~e~i 87 (351)
T PRK01688 29 GDVWLNANEY--P--TAVE-FQL-------TQQTLNRYPECQ-PKAVIENYAAYA-GVK-----PEQVL--VSRGADEGI 87 (351)
T ss_pred CceEecCCCC--C--CCCC-hhh-------cccccccCCCCC-hHHHHHHHHHHh-CCC-----HHHEE--EcCCHHHHH
Confidence 4699999983 1 1222 221 111234486654 479999999996 433 67998 999999999
Q ss_pred HHHHHHHHHhCCC-CEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 131 RLFAEFQRRFHPE-SHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 131 ~~~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
.++ +.+++.+| |+|++++|+|..|...++..|++++.+++ .+++++|++.+++++. ++++++++|||||||
T Consensus 88 ~~~--~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~--~~~~~~d~~~l~~~~~----~~~lv~l~nPnNPTG 159 (351)
T PRK01688 88 ELL--IRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPT--LDNWQLDLPAIADNLD----GVKVVYVCSPNNPTG 159 (351)
T ss_pred HHH--HHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeec--CCCCCCCHHHHHHhcc----CCcEEEEeCCCCCCC
Confidence 998 66677887 99999999999999999999999999998 3358999999988763 578999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
..++.+++++|++.|++ +.+||+||+|.+|.... +...+....+++++++||||.||++|+|+||+++ ++
T Consensus 160 ~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~------s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~---~~ 229 (351)
T PRK01688 160 NLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQA------SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLA---NE 229 (351)
T ss_pred CCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCC------ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhC---CH
Confidence 99999999999999987 57899999999987431 1222223457899999999999999999999964 88
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+++... ..+.+.+.|.++..+|.+.. .+++++.++.+.++++.+.+.|+.++. +....+.+
T Consensus 230 ~----~i~~l~~~~~--~~~v~~~~~~~a~~~L~~~~-----~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~ps~ 295 (351)
T PRK01688 230 E----VINLLLKVIA--PYPLSTPVADIAAQALSPQG-----IAAMRERVAEINANRQWLIAALKEIPC---VEQVFDSE 295 (351)
T ss_pred H----HHHHHHhccC--CCCCCHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHHhCCC---CCeECCCC
Confidence 8 8888877543 24577778888888887532 145677778888899999999988742 33344567
Q ss_pred ceeEecCC-CHHHH-HHHhhhccEEEeCC----C-----cEEeccCCCCcHHHHHHHH
Q 013839 370 GMFCFSGL-TPYQV-DRLAKEFHIYMTQD----G-----RISMAGVTTGNVNYLANAI 416 (435)
Q Consensus 370 g~~~~~~~-~~~~~-~~ll~~~gI~i~pg----g-----Ris~~~~~~e~i~~~~~~l 416 (435)
++|+|+.+ +.+.+ +.| .++||.++++ | ||+++ +.+++++++++|
T Consensus 296 ~nfi~~~~~~~~~l~~~L-~~~gi~vr~~~~~~~~~~~iRis~~--~~~e~~~l~~al 350 (351)
T PRK01688 296 TNYILARFTASSAVFKSL-WDQGIILRDQNKQPGLSNCLRITIG--TREECQRVIDAL 350 (351)
T ss_pred CcEEEEEcCCHHHHHHHH-HHCCeEEEECCCcCCCCCeEEEeCC--CHHHHHHHHHhh
Confidence 78999877 34444 555 5689999864 2 99985 468888888876
No 100
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3.1e-37 Score=294.27 Aligned_cols=301 Identities=14% Similarity=0.163 Sum_probs=227.9
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
.++|+|+.|+. +.+++. ...... . ...|+.. ..+||++|++++ + +++|+ +|+|++++
T Consensus 20 ~~~i~l~~ne~--p~~~~~-~~~~~~---~-----~~~yp~~--~~~Lr~~ia~~~-~-------~~~I~--it~Gs~~a 76 (330)
T PRK05664 20 ADWLDLSTGIA--PWPWPV-PAIPAD---A-----WARLPET--DDGLEAAARAYY-G-------APQLL--PVAGSQAA 76 (330)
T ss_pred HHheeecCCcC--CCCCCC-cccCHH---H-----HHhCCCC--hHHHHHHHHHHh-C-------CCCEE--ECcCHHHH
Confidence 46799999962 111121 122111 1 1226543 389999999998 3 24788 99999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ + .+.+||+|++++|+|+.|...++..|++++.+++ +++++.+. +++++++++||||||
T Consensus 77 l~~~--~--~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~----~~~~v~l~nP~NPTG 138 (330)
T PRK05664 77 IQAL--P--RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD----SLDVLVVVNPNNPTG 138 (330)
T ss_pred HHHH--H--HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc----CCCEEEEeCCcCCCC
Confidence 8876 3 3579999999999999999999999999998875 13444443 456788899999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.+++++|+++|++++++||+||+|.++... +++..+. ..+++++++||||.||++|+|+||+++ ++
T Consensus 139 ~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~------~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v~---~~ 208 (330)
T PRK05664 139 RRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ------HSLAACA-HRPGLIVLRSFGKFFGLAGARLGFVLA---EP 208 (330)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc------ccccccc-cCCCEEEEeeccccccCCCcceEEEEe---CH
Confidence 9999999999999999999999999999876521 1333332 346899999999999999999999974 88
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+.+... ..+.+.+.|.++..+|.+. .+.+..+++++++++.+.+.|++++. . +.+
T Consensus 209 ~----l~~~~~~~~~--~~~~~~~~~~~~~~~L~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~~----~---~~~ 268 (330)
T PRK05664 209 A----LLRALAELLG--PWTVSGPTRWLAQAALADT-------PWQRRQRERLLAASQRLAALLRRHGL----T---PAG 268 (330)
T ss_pred H----HHHHHHHhcC--CCCCCHHHHHHHHHHHhCh-------HHHHHHHHHHHHHHHHHHHHHHHCCC----c---ccC
Confidence 8 8888877643 2356788899999999764 34567788999999999999998863 2 233
Q ss_pred c--eeEecCC-CHHHHHHHhhhccEEEeCCC-----cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 370 G--MFCFSGL-TPYQVDRLAKEFHIYMTQDG-----RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 370 g--~~~~~~~-~~~~~~~ll~~~gI~i~pgg-----Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
| +|+|+.. +.+.+.+.+.++||.+.+.+ ||+++. +.++++++.++|+++.++
T Consensus 269 ~~~~f~~~~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 269 GCALFQWVRTEDAAALHEFLARRGILTRLFEQPASLRFGLPA-DEADWARLDQALLAYRKE 328 (330)
T ss_pred CcceEEEEecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence 4 7888876 45555455567899998753 999975 567788888888776543
No 101
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=8.4e-38 Score=301.58 Aligned_cols=323 Identities=16% Similarity=0.168 Sum_probs=243.4
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
+++|+|+.|.+ +. .+++ .+.+++.+.... ...|+ ..|.+++|+++++++. . ++++|+ +++|++++
T Consensus 22 ~~~i~l~~~~~-~~---~~~~-~~~~a~~~~~~~-~~~y~-~~g~~~lr~~ia~~~~-~-----~~~~I~--~~~G~~~~ 86 (352)
T PRK03321 22 PGAIKLSSNET-PF---GPLP-SVRAAIARAAAG-VNRYP-DMGAVELRAALAEHLG-V-----PPEHVA--VGCGSVAL 86 (352)
T ss_pred ccceeccCCCC-CC---CCCH-HHHHHHHHHHHh-cCcCC-CCcHHHHHHHHHHHhC-c-----CHHHEE--ECCCHHHH
Confidence 36899999985 22 2233 344444433222 34575 4799999999999983 2 266888 89999988
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+.++ +..++.+||+|+++.|+|..+...++..|++++.+++. + ++++|++.+++.+. ++++++++++||||||
T Consensus 87 l~~~--~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG 159 (352)
T PRK03321 87 CQQL--VQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLT-P-DHTHDLDAMAAAIT---DRTRLIFVCNPNNPTG 159 (352)
T ss_pred HHHH--HHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCC-C-CCCCCHHHHHHhhc---cCCCEEEEeCCCCCcC
Confidence 8777 56668899999999999999988889999999999873 2 36899999999887 5678888999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.+++.++++.+ ++++++|+||+|.++.+++. ...++... +..+++++++||||.||++|+|+||+++ ++
T Consensus 160 ~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~~ 232 (352)
T PRK03321 160 TVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDD--VPDGLELV-RDHPNVVVLRTFSKAYGLAGLRVGYAVG---HP 232 (352)
T ss_pred CCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcC--CCcHHHHH-hhCCCEEEEecchHHhhhHHHhhhhhcC---CH
Confidence 999999888888865 47999999999999987642 11223222 3346899999999999999999999974 78
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.+.+.. ...+.+.++|.++..++...+ .+ .+..+++.++++.+.+.|+..+ +.+. +.+
T Consensus 233 ~----~~~~~~~~~--~~~~~s~~~q~~a~~~l~~~~------~~-~~~~~~~~~~r~~~~~~L~~~~----~~~~-~~~ 294 (352)
T PRK03321 233 E----VIAALRKVA--VPFSVNSLAQAAAIASLAAED------EL-LERVDAVVAERDRVRAALRAAG----WTVP-PSQ 294 (352)
T ss_pred H----HHHHHHHhc--CCCCCCHHHHHHHHHHhcCHH------HH-HHHHHHHHHHHHHHHHHHHHCC----CccC-CCC
Confidence 8 888887653 345788999998888887532 22 3333444556677888998875 3343 346
Q ss_pred ceeEecCC--CHHHHHHHhhhccEEEeCCC----cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 370 GMFCFSGL--TPYQVDRLAKEFHIYMTQDG----RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 370 g~~~~~~~--~~~~~~~ll~~~gI~i~pgg----Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
|+|+|+.+ +.+.+.+.++++||.+.+.+ ||+++ +.+++++++++|++++.
T Consensus 295 g~~i~i~l~~~~~~~~~~l~~~gI~v~~~~~~~iRi~~~--~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 295 ANFVWLPLGERTADFAAAAAEAGVVVRPFAGEGVRVTIG--APEENDAFLRAARAWRA 350 (352)
T ss_pred CCEEEEeCCCCHHHHHHHHHHCCEEEEccCCCcEEEeeC--CHHHHHHHHHHHHHHhc
Confidence 78999876 33444444577999999864 99984 57888999999988754
No 102
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-37 Score=295.49 Aligned_cols=316 Identities=16% Similarity=0.177 Sum_probs=240.0
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
..++.+||+.|++ ...++..+.+.+...+ .. ..+|++..|.+++|+++++++ +. ++++|+ +|+|++
T Consensus 20 ~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~-~~-~~~Y~~~~g~~~lr~aia~~~-~~-----~~~~I~--it~Ga~ 85 (349)
T PRK07908 20 AGPGLLDFAVNVR----HDTPPEWLRERLAARL-GD-LAAYPSTEDERRARAAVAARH-GR-----TPDEVL--LLAGAA 85 (349)
T ss_pred CCCCeEEecCCCC----CCCCCHHHHHHHHHHh-hH-hhcCCCccchHHHHHHHHHHh-Cc-----ChhhEE--ECCCHH
Confidence 3578999999984 1133444433333333 22 456998899999999999997 32 377998 999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCC
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNP 207 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NP 207 (435)
+++.++ +. +.+ +.++++.|+|..+...++..|++++.+++. + ++++|++.+ . +++++++++|||||
T Consensus 86 ~al~~~--~~--l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~-~-~~~~d~~~l----~---~~~~~i~l~np~NP 151 (349)
T PRK07908 86 EGFALL--AR--LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLD-P-PFRLDPAAV----P---DDADLVVIGNPTNP 151 (349)
T ss_pred HHHHHH--Hh--cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccC-c-ccCcChhHh----c---cCCCEEEEcCCCCC
Confidence 999877 33 567 456778999999999999999999999983 3 378888754 3 45789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
||.+++.+++. ++|+ ++.++|+||+|.++.++. ..++... ..+++++++||||.|+++|+|+||+++
T Consensus 152 TG~~~~~~~l~---~l~~-~~~~iIvDe~y~~~~~~~----~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~--- 218 (349)
T PRK07908 152 TSVLHPAEQLL---ALRR-PGRILVVDEAFADAVPGE----PESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALG--- 218 (349)
T ss_pred CCCCcCHHHHH---HHHh-cCCEEEEECcchhhccCC----ccccccc--cCCCEEEEeecccccCCccceeeeeec---
Confidence 99999988554 4555 477888999998875432 2233221 235799999999999999999999974
Q ss_pred ChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc
Q 013839 288 DSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN 367 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 367 (435)
+++ +++.+.+.... .+.+.+.+.++..++.+.. .+++++.+++++++++.+.+.|++++ +.+..+
T Consensus 219 ~~~----~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p 283 (349)
T PRK07908 219 APD----VLARLTRGRAH--WPVGTLQLEAIAACCAPRA-----VAEAAADAARLAADRAEMVAGLRAVG----ARVVDP 283 (349)
T ss_pred CHH----HHHHHHhcCCC--CCccHHHHHHHHHHhcccc-----hHHHHHHHHHHHHHHHHHHHHHHhCC----cEeccC
Confidence 788 77777765432 4566677777777776432 25677889999999999999998875 567777
Q ss_pred CcceeEecCCC-HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 368 QLGMFCFSGLT-PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 368 ~~g~~~~~~~~-~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
.+|+|+|+.+. .+.+...++++||.+.||. |||++ +++++++++++|++++.
T Consensus 284 ~~g~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 284 AAAPFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILK 346 (349)
T ss_pred CCceEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHh
Confidence 88999999874 4566666788999999861 99993 67899999999988754
No 103
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.3e-37 Score=295.59 Aligned_cols=303 Identities=15% Similarity=0.093 Sum_probs=225.1
Q ss_pred CeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHH
Q 013839 51 YKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGAC 130 (435)
Q Consensus 51 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~ 130 (435)
+.|+|+.++ + |... . .....|+.+ -..+||+++++++ +.. +++|+ +|+|+++++
T Consensus 17 ~~i~l~~Ne----n--p~~~---------~--~~~~~Yp~~-~~~~lr~~ia~~~-~~~-----~~~I~--it~Gs~~~l 70 (332)
T PRK06425 17 RIIDFSANI----N--DFMD---------I--GDISIYPEI-SYTDIEDQIKIYT-QGL-----KIKVL--IGPGLTHFI 70 (332)
T ss_pred CEEEecccc----C--CCcC---------h--hhcccCcCc-CHHHHHHHHHHHh-CCC-----cceEE--ECCCHHHHH
Confidence 689999998 2 2210 0 113347654 4789999999998 333 56888 999999999
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCC
Q 013839 131 RLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGV 210 (435)
Q Consensus 131 ~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~ 210 (435)
.++ +. ++.+| .|++++|+|+.|...++..|++++.+|+. + +++|.+.+++ .++++++++|||||||.
T Consensus 71 ~~~--~~-~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~-~--~~~~~~~l~~------~~~k~v~l~nP~NPTG~ 137 (332)
T PRK06425 71 YRL--LS-YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFN-L--INNNPEILNN------YNFDLIFIVSPDNPLGN 137 (332)
T ss_pred HHH--HH-HhCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCC-c--ccCcHHHHhh------cCCCEEEEeCCCCCcCC
Confidence 888 43 46776 47777999999999999999999999983 2 3556544432 35788899999999999
Q ss_pred CCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChh
Q 013839 211 DPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSK 290 (435)
Q Consensus 211 ~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~ 290 (435)
+++.+++++|+++|++|+++||+||+|.+|.+++ ..+.....+..+++|+++||||.+|+||+|+||+++ +++
T Consensus 138 ~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~----~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~---~~~ 210 (332)
T PRK06425 138 LISRDSLLTISEICRKKGALLFIDEAFIDFVPNR----AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIAT---DDY 210 (332)
T ss_pred ccCHHHHHHHHHHHHHcCCEEEEecchhcccccc----chhHHHHhccCCCEEEEeecHHhcCCchhhheeeec---CHH
Confidence 9999999999999999999999999999998653 123333334457899999999999999999999974 888
Q ss_pred HHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcc
Q 013839 291 QAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLG 370 (435)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g 370 (435)
+++.+.+.... .+.+.+++ .++.... ++.++++.++.++++++.+.+.|++++ +.+..+.+|
T Consensus 211 ----li~~l~~~~~~--~~~~~~~~----~~l~~~~----~~~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~g 272 (332)
T PRK06425 211 ----NMKISRKITEP--WSVCDPAI----DFIRSID----LDYVAKHSLDIMENERSYLINNLEAMG----FRAAGDPSA 272 (332)
T ss_pred ----HHHHHHHcCCC--CccCHHHH----HHHHHhh----hHHHHHHHHHHHHHHHHHHHHHHHHCC----CEECCCCCc
Confidence 88877774332 22333322 2232211 235567788999999999999999886 445444466
Q ss_pred eeEecCC-CHH-HHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHHHHHH
Q 013839 371 MFCFSGL-TPY-QVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 371 ~~~~~~~-~~~-~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l~~~l 420 (435)
.|+|+.+ +.+ +.+.++ ++||.++|+. ||+++ +.++.++++++|++++
T Consensus 273 ~f~~~~~~~~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 273 NFITFMIPDAHDFYSYLL-KNGILVRLLDDYECLGEQYIRIAIR--RRSFNIKLVNALRNFL 331 (332)
T ss_pred eEEEEEcCCHHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 7888876 344 445554 5899999861 99985 4678899999998765
No 104
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-37 Score=298.92 Aligned_cols=311 Identities=12% Similarity=0.122 Sum_probs=238.2
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
...|+|+.|++ +. +++ +.+ .. .. ...|++. +.++||+++++++ +. ++++|+ +|+|++++
T Consensus 31 ~~~~~l~~ne~-~~---~~~-~~~-----~~-~~-~~~Yp~~-~~~~Lr~aia~~~-~~-----~~~~I~--it~Gs~~~ 89 (354)
T PRK04635 31 RGDIWINANES-PF---NNE-YKL-----DL-AR-LNRYPEC-QPPELINAYSAYA-GV-----APEQIL--TSRGADEA 89 (354)
T ss_pred CCcEEeeCCCC-CC---CCC-hhh-----hh-HH-hccCCCC-CHHHHHHHHHHHh-Cc-----CHHHEE--EeCCHHHH
Confidence 46699999984 11 222 211 11 12 4558775 5799999999986 43 277998 99999999
Q ss_pred HHHHHHHHHHhCCC-CEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC
Q 013839 130 CRLFAEFQRRFHPE-SHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT 208 (435)
Q Consensus 130 ~~~~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt 208 (435)
+.++ +..++.+| |+|++++|+|..|...++..|++++.+|+ .+++++|++.++. + +++++++++||||||
T Consensus 90 i~~~--~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~--~~~~~~~~~~l~~-~----~~~~li~i~nP~NPT 160 (354)
T PRK04635 90 IELL--IRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPL--TADYQLPLDYIEQ-L----DGAKLVFICNPNNPT 160 (354)
T ss_pred HHHH--HHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEec--CCCCCCCHHHHHh-c----cCCCEEEEeCCCCCC
Confidence 9998 66677888 99999999999999999999999999998 2357899988863 3 467899999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecC
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVD 288 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~ 288 (435)
|.+++.+++++|++.|++ ++||+||+|.+|.... +...+....+++++++||||.+|++|+|+||+++ +
T Consensus 161 G~~~~~~~l~~l~~~~~~--~~vivDeay~~~~~~~------s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~---~ 229 (354)
T PRK04635 161 GTVIDRADIEQLIEMTPD--AIVVVDEAYIEFCPEY------SVADLLASYPNLVVLRTLSKAFALAGARCGFTLA---N 229 (354)
T ss_pred CccCCHHHHHHHHHhCCC--cEEEEeCchHhhccCc------chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhC---C
Confidence 999999999999988764 9999999999887431 2222223457899999999999999999999964 8
Q ss_pred hhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC
Q 013839 289 SKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ 368 (435)
Q Consensus 289 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 368 (435)
++ +++.+.+... ..+.+.+.|.++..+|.+.. .+.+++.+++++++++.+.+.|++++. +.+.+++
T Consensus 230 ~~----~~~~l~~~~~--~~~~~~~~~~~a~~~l~~~~-----~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~~~ 295 (354)
T PRK04635 230 EE----LIEILMRVIA--PYPVPLPVSEIATQALSEAG-----LARMKFQVLDLNAQGARLQAALSMYGG---AKVLEGN 295 (354)
T ss_pred HH----HHHHHHhhcC--CCCCCHHHHHHHHHHHhccc-----HHHHHHHHHHHHHHHHHHHHHHHhCCC---ceECCCC
Confidence 88 7777776432 34677788888888886543 144667778899999999999998752 4455555
Q ss_pred cceeEecCC-CHHHHHHHhhhccEEEeCC------C--cEEeccCCCCcHHHHHHHHHH
Q 013839 369 LGMFCFSGL-TPYQVDRLAKEFHIYMTQD------G--RISMAGVTTGNVNYLANAIHE 418 (435)
Q Consensus 369 ~g~~~~~~~-~~~~~~~ll~~~gI~i~pg------g--Ris~~~~~~e~i~~~~~~l~~ 418 (435)
|.|+|+.+ +.+.+.++++++||.++++ + |||++ +.+++++++++|++
T Consensus 296 -g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~ 351 (354)
T PRK04635 296 -GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSFS--NRAETDKLIGLIRN 351 (354)
T ss_pred -CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence 56888876 5555655667899999754 1 99984 57888888888865
No 105
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=6.7e-37 Score=294.74 Aligned_cols=317 Identities=15% Similarity=0.131 Sum_probs=245.3
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
.++|+|++|++ +. +.++++++++.+.+. . ...|+++.+ +++|+++++++. . ++++|. +++|++++
T Consensus 19 ~~~i~l~~~~~-~~---~~~~~~~~a~~~~~~-~-~~~y~~~~~-~~lr~~ia~~~~-~-----~~~~i~--~~~G~~~~ 83 (346)
T TIGR01141 19 KEVIKLNSNEN-PF---GPPPKAKEALRAEAD-K-LHRYPDPDP-AELKQALADYYG-V-----DPEQIL--LGNGSDEI 83 (346)
T ss_pred CceEEccCCCC-CC---CCCHHHHHHHHHhHH-H-hhcCCCCCH-HHHHHHHHHHhC-c-----ChHHEE--EcCCHHHH
Confidence 57999999995 22 445455454444432 2 456887776 899999999984 2 256888 89999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCC
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG 209 (435)
+..+ +..++.+||+|++++|+|+.+...++..|++++.+++. +++.+|++++++.+. ++++++++++|+||||
T Consensus 84 l~~~--~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~---~~~~~v~l~~p~NptG 156 (346)
T TIGR01141 84 IELL--IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLD--EDGQLDLEDILVAID---DKPKLVFLCSPNNPTG 156 (346)
T ss_pred HHHH--HHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccC--CCCCCCHHHHHHhcC---CCCCEEEEeCCCCCCC
Confidence 8877 66667899999999999999988889999999999883 346799999999875 6788999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
.+++.++++++++.++ +++++|+|++|..+...+ ...+. . ...+++++++|+||.+|++|+|+||+++ ++
T Consensus 157 ~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~---~~~~~--~-~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~~ 226 (346)
T TIGR01141 157 NLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP---STLPL--L-AEYPNLIVLRTLSKAFGLAGLRIGYAIA---NA 226 (346)
T ss_pred CCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc---cHHHH--H-hhCCCEEEEehhhHhhhchhhhceeeec---CH
Confidence 9999999999999887 799999999998776532 12221 1 2235789999999999999999999974 78
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +++.++.... ..+.+.++|.++..++... .+.++.+++++++++.+.+.|++++. +.+. +.+
T Consensus 227 ~----~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~g---~~~~-~~~ 289 (346)
T TIGR01141 227 E----IIDALNKVRA--PFNLSRLAQAAAIAALRDD-------DFIEKTVEEINAERERLYDGLKKLPG---LEVY-PSD 289 (346)
T ss_pred H----HHHHHHhccC--CCCCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHhcCC---CEEC-CCc
Confidence 8 7777776543 3467888999998888764 35677888999999999999988731 4443 446
Q ss_pred ceeEecCC--CHHHHHHHhhhccEEEeCC-------C--cEEeccCCCCcHHHHHHHHH
Q 013839 370 GMFCFSGL--TPYQVDRLAKEFHIYMTQD-------G--RISMAGVTTGNVNYLANAIH 417 (435)
Q Consensus 370 g~~~~~~~--~~~~~~~ll~~~gI~i~pg-------g--Ris~~~~~~e~i~~~~~~l~ 417 (435)
|+|+|+.+ +.+.+...|.++||.+.|| + |+|++ ++++++++++.|+
T Consensus 290 g~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l~ 346 (346)
T TIGR01141 290 ANFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG--TREENDRFLAALR 346 (346)
T ss_pred CCEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHhC
Confidence 78898866 3444544455789999986 2 99974 6788888887763
No 106
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.4e-36 Score=292.61 Aligned_cols=324 Identities=16% Similarity=0.169 Sum_probs=238.5
Q ss_pred hhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCC
Q 013839 37 INGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEG 116 (435)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~ 116 (435)
.....+++. .+..++|+|+.|++ +. .+++..++++...+. . ...|+++.+ +++|+++++++ +.. ++
T Consensus 22 ~~~~~~~~~-~~~~~~i~l~~~~~-~~---~~~~~~~~~~~~~~~-~-~~~y~~~~~-~~lr~~ia~~~-~~~-----~~ 87 (361)
T PRK00950 22 KEEIAREYG-IDPESIIKLGSNEN-PL---GPSPKAVEAIEKELS-K-IHRYPEPDA-PELREALSKYT-GVP-----VE 87 (361)
T ss_pred HHHHHHHhC-CCccceEEccCCCC-CC---CCCHHHHHHHHHHHH-h-hcCCCCCCH-HHHHHHHHHHh-CCC-----HH
Confidence 334444443 23458999999983 22 333344444433333 2 355877554 89999999998 332 56
Q ss_pred CeeeEe-cCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCC
Q 013839 117 RSAGVQ-ALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDS 195 (435)
Q Consensus 117 ~v~~~~-t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 195 (435)
+++ + ++|+++++.++ +..++.+||+|++++|+|+.+...++..|++++.++. ++++++|++.+++.+. ++
T Consensus 88 ~i~--~~~~Ga~~~i~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~---~~ 158 (361)
T PRK00950 88 NII--VGGDGMDEVIDTL--MRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAIT---EK 158 (361)
T ss_pred HEE--EeCCCHHHHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhc---cC
Confidence 777 7 67778887777 5556789999999999999998889999999998885 4567899999999886 56
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc
Q 013839 196 SFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY 275 (435)
Q Consensus 196 ~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~ 275 (435)
++++++++||||||.+++.+++.+ +|+++++++|+||+|.++... +..+ +.+..+++++++||||.+|++
T Consensus 159 ~~~v~~~~p~nptG~~~~~~~l~~---l~~~~~~~li~De~y~~~~~~----~~~~---~~~~~~~vi~~~S~SK~~g~~ 228 (361)
T PRK00950 159 TKVIFLCTPNNPTGNLIPEEDIRK---ILESTDALVFVDEAYVEFAEY----DYTP---LALEYDNLIIGRTFSKVFGLA 228 (361)
T ss_pred CCEEEEeCCCCCCCCCcCHHHHHH---HHHHCCcEEEEECchhhhCcc----chHH---HHHhcCCEEEEEeehHhhcCc
Confidence 788888999999999999885554 566789999999999887621 1222 223346899999999999999
Q ss_pred CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013839 276 GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEK 355 (435)
Q Consensus 276 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 355 (435)
|+|+||+++ +++ +++.+++.... .+.+.++|.++..++.+. +++++.+++++++++.+.+.|+
T Consensus 229 GlRiG~~~~---~~~----~~~~~~~~~~~--~~~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~r~~l~~~l~- 291 (361)
T PRK00950 229 GLRIGYGFV---PEW----LIDYYMRAKTP--FSLTRLSQAAAIAALSDK-------EYIEKSIEHGIKSREYLYNELP- 291 (361)
T ss_pred hhhcchhcC---CHH----HHHHHHHhcCC--CCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHhhcC-
Confidence 999999964 788 88777775543 357788998888888754 4566677778888888777764
Q ss_pred hCCCCCccccccCcceeEecCC---CHHHH-HHHhhhccEEEeCC------C----cEEeccCCCCcHHHHHHHHHHHH
Q 013839 356 LGSSLNWEHITNQLGMFCFSGL---TPYQV-DRLAKEFHIYMTQD------G----RISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~~~~~---~~~~~-~~ll~~~gI~i~pg------g----Ris~~~~~~e~i~~~~~~l~~~l 420 (435)
+.+. +.+++|+|+.+ +.+.+ +.+ .++||.+.|| + ||+++ +.+++++++++|++++
T Consensus 292 ------~~~~-~~~~~~i~~~~~~~~~~~~~~~l-~~~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il 360 (361)
T PRK00950 292 ------FKVY-PSEANFVLVDVTPMTAKEFCEEL-LKRGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIV 360 (361)
T ss_pred ------eeEC-CCcceEEEEECCCCCHHHHHHHH-HHCCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHh
Confidence 1233 45678999865 34444 555 5689999875 1 99985 5678999999998865
No 107
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=2.6e-36 Score=288.05 Aligned_cols=314 Identities=16% Similarity=0.167 Sum_probs=239.3
Q ss_pred chhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccC
Q 013839 36 PINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKE 115 (435)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~ 115 (435)
++..+.+++.. ++++.++|+.|++ +. +++ ..+ ... .....|+++.+ +++|+.+++++ +.+ +
T Consensus 4 ~~~~~~~~~~~-~~~~~~~~~~~~~-~~---~~~--~~~----~~~-~~~~~y~~~~~-~~lr~~la~~~-~~~-----~ 64 (330)
T TIGR01140 4 NLRRAAARYGI-PPEDWLDFSTGIN-PL---GPP--VPP----IPA-SAWARYPDPEY-DELRAAAAAYY-GLP-----A 64 (330)
T ss_pred cHHHHHHHcCC-ChhheeEccccCC-CC---CCC--hhh----cch-HHHhhCCCccH-HHHHHHHHHHh-CCC-----h
Confidence 45566677643 6788999999984 22 222 211 111 22456888776 99999999997 322 6
Q ss_pred CCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCC
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDS 195 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 195 (435)
+++. +|+|+++++.++ +. .+.+| +|++++|+|..+...++..|.+++.++ |++++++.+. +
T Consensus 65 ~~i~--~t~G~~~~i~~~--~~-~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~----~ 125 (330)
T TIGR01140 65 ASVL--PVNGAQEAIYLL--PR-LLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE----E 125 (330)
T ss_pred hhEE--ECCCHHHHHHHH--HH-HhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc----c
Confidence 7888 999999998886 33 35677 799999999999999999999888774 6788888874 3
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc
Q 013839 196 SFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY 275 (435)
Q Consensus 196 ~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~ 275 (435)
++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+.. ++....+..+++++++|+||.+|++
T Consensus 126 ~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~------~~~~~~~~~~~~i~~~S~SK~~g~~ 199 (330)
T TIGR01140 126 LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA------SLAPQAARFPGLVVLRSLTKFFGLA 199 (330)
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc------chhhHhccCCCEEEEEecchhhcCc
Confidence 5688889999999999999999999999999999999999999887541 2222223457899999999999999
Q ss_pred CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013839 276 GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEK 355 (435)
Q Consensus 276 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 355 (435)
|+|+||+++ +++ +++.+..... ..+.+.++|.++..++.+. ++.+..+++++++++.+.+.|++
T Consensus 200 G~R~G~i~~---~~~----~~~~l~~~~~--~~~~s~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~ 263 (330)
T TIGR01140 200 GLRLGFVVA---HPA----LLARLREALG--PWTVNGPARAAGRAALADT-------AWQAATRARLAAERARLAALLAR 263 (330)
T ss_pred hhhhhheeC---CHH----HHHHHHhcCC--CCCchHHHHHHHHHHHhch-------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999974 777 7777776543 3456788999999999865 34456788999999999999998
Q ss_pred hCCCCCccccccCcceeEecCC-C-HHHHHHHhhhccEEEeCCC----------cEEeccCCCCcHHHHHHHH
Q 013839 356 LGSSLNWEHITNQLGMFCFSGL-T-PYQVDRLAKEFHIYMTQDG----------RISMAGVTTGNVNYLANAI 416 (435)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~~~~~-~-~~~~~~ll~~~gI~i~pgg----------Ris~~~~~~e~i~~~~~~l 416 (435)
++. +.. .+.+|+|+|+.+ + .++.+.++ ++||.+.||. ||+++. +.++ +.++++|
T Consensus 264 ~~~---~~~-~~~~~~f~~~~~~~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 264 LGG---LEV-VGGTALFLLVRTPDAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred CCC---ceE-CCCCCeEEEEEcCCHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 863 333 355789999977 3 34456664 5899999861 999966 4444 6666665
No 108
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=4.2e-35 Score=277.41 Aligned_cols=294 Identities=15% Similarity=0.112 Sum_probs=207.0
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchh
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTG 128 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~ 128 (435)
..++|+|+.|+. . .+ |+.. .+++.+.... ...|+. ...+|+++++++ + ++|+ +|+|+++
T Consensus 7 ~~~~i~l~~~~n--p--~~-p~~~-~~a~~~~~~~-~~~yp~---~~~l~~~ia~~~-~--------~~I~--vt~G~~~ 65 (311)
T PRK08354 7 EEGLIDFSASVN--P--YP-PEWL-DEMFERAKEI-SGRYTY---YEWLEEEFSKLF-G--------EPIV--ITAGITE 65 (311)
T ss_pred ccceeEecCCCC--C--CC-CHHH-HHHHHHHHHH-hhcCCC---hHHHHHHHHHHH-C--------CCEE--ECCCHHH
Confidence 357999999962 1 12 3333 3334333322 345754 367999999997 2 2677 8999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC
Q 013839 129 ACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT 208 (435)
Q Consensus 129 a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt 208 (435)
++.++ + ..+.+||+|++++|+|+.|...++..|++++.++ +|++.+++.+. +++++++++|||||
T Consensus 66 al~~~--~-~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~----~~~~vi~~~P~NPT 130 (311)
T PRK08354 66 ALYLI--G-ILALRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE----RNSVVFFCNPNNPD 130 (311)
T ss_pred HHHHH--H-HhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc----CCCEEEEecCCCCC
Confidence 98876 3 3445999999999999999999999999887653 57888888775 35678889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecC
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVD 288 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~ 288 (435)
|.+++.+++++|+++|++|++++|+||+|.+|.+++. .. ..+++++++||||.|+++|+|+||+++
T Consensus 131 G~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~-----~~-----~~~~vi~~~S~SK~~~l~GlRiG~~v~---- 196 (311)
T PRK08354 131 GKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE-----SP-----EGENIIKLRTFTKSYGLPGIRVGYVKG---- 196 (311)
T ss_pred CCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc-----cc-----CCCcEEEEeccHhhcCCccceeeeeee----
Confidence 9999999999999999999999999999999987531 11 157899999999999999999999973
Q ss_pred hhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC
Q 013839 289 SKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ 368 (435)
Q Consensus 289 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 368 (435)
+.+.+++... ....+..++.++..++.+. + +++...++.+.++++.+.+.+ ..+++
T Consensus 197 ------~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~l~~~l----------~~~~~ 252 (311)
T PRK08354 197 ------FEEAFRSVRM--PWSIGSTGYAFLEFLIEDD-----F-EHLRKTMPLIWREKERFEKAL----------YVKSD 252 (311)
T ss_pred ------hHHHHHHcCC--CccCCHHHHHHHHHHHHhH-----H-HHHHHHHHHHHHHHHHHHHhc----------CCCCC
Confidence 2233444332 2344556666666666532 1 333444445555544443332 23466
Q ss_pred cceeEecCC-CHHHHHHHhhhccEEEeCCC--------cEEeccCCCCcHHHHHHHHHHH
Q 013839 369 LGMFCFSGL-TPYQVDRLAKEFHIYMTQDG--------RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 369 ~g~~~~~~~-~~~~~~~ll~~~gI~i~pgg--------Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
++||+ ..+ +.+.+.+.+.++||.+.||. ||+++. .++.++++++|+++
T Consensus 253 ~~~~~-~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~--~~~~~~l~~al~~~ 309 (311)
T PRK08354 253 ANFFI-KDVGDAEKFVEFLKRNGILVRDCTSFGLPGYIRFSVRD--REENEKLIRALREW 309 (311)
T ss_pred CcEEE-EECCCHHHHHHHHHHCCeEEEecccCCCCCeEEEEeCC--HHHHHHHHHHHHHh
Confidence 77666 444 44444344467899999972 999854 45567777777764
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.4e-32 Score=270.49 Aligned_cols=349 Identities=13% Similarity=0.061 Sum_probs=246.9
Q ss_pred chhhHHHHHhcCCCCCeeeeecceec-CCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcccc
Q 013839 36 PINGVTEAFLADPSPYKINLGVGAYR-DDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVK 114 (435)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~ 114 (435)
.+....++++ ..+.++|+|++|+|. |...+....+...++..++..+ ..+|.+..|.++||+++++++. .
T Consensus 23 ~~~~~~~~l~-~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-~~~Y~~~~g~~~Lreaia~~~~-~------ 93 (460)
T PRK13238 23 TREERERALA-EAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-DEAYAGSRSYYRLEDAVKDIFG-Y------ 93 (460)
T ss_pred CHHHHHHHHH-HcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-CcccCCCCCHHHHHHHHHHHhC-C------
Confidence 3444444553 467899999999973 4422121123444445555555 4569999999999999999983 2
Q ss_pred CCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCC------CCC--CcChHhHH
Q 013839 115 EGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDP------DSK--SLDFAALM 186 (435)
Q Consensus 115 ~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~------~~~--~~d~e~l~ 186 (435)
++++ +|+||++|+.++ +.++++||| |++++|.|..|...++..|++++.+++... ++| .+|+++|+
T Consensus 94 -~~vv--~t~ggt~A~~~~--~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le 167 (460)
T PRK13238 94 -PYTI--PTHQGRAAEQIL--FPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLE 167 (460)
T ss_pred -CcEE--ECCCHHHHHHHH--HHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHH
Confidence 2565 899999999988 777899999 999999999999999999999999988421 234 49999999
Q ss_pred HHhhcCC-CCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeeeeccCC--CccCCCC---cccHHHHHHhhhcC
Q 013839 187 DDIKNAP-DSSFFLLHPSAHNPTG-VDPTEEQWREISYQFKVKGHFPFFDMAYQ--GFASGDL---DKDAQAIRIFLEDE 259 (435)
Q Consensus 187 ~~i~~~~-~~~~~v~~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~vi~Deay~--~~~~~~~---~~~~~~~~~~~~~~ 259 (435)
+.+++.. ++++++++++|+|||| .+++.+++++|.++|++||+++|+|+++. ...|... .....++...
T Consensus 168 ~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i---- 243 (460)
T PRK13238 168 ALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI---- 243 (460)
T ss_pred HHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH----
Confidence 9997532 4689999999999997 99999999999999999999999999652 1222100 0001122111
Q ss_pred CeEEEEecccccccccCCcc-----cEEEEEecChhHHHHHHHHHHHHh----hc-cccCCChhHHHHHHHHhCChhhHH
Q 013839 260 HLIGCAQSYAKSMGLYGHRV-----GCLSILCVDSKQAAAIRSQIQQIA----RA-MYGSPPVHGILLVATILSDPNLKS 329 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G~Rv-----G~~~~~~~~~~~~~~~~~~l~~~~----~~-~~~~~~~~~q~~~~~~l~~~~l~~ 329 (435)
+..++|++|.+.++|+|+ |++++ +++++ +++.+++.. .. .+.+.+...|.+++..|.+.. .
T Consensus 244 --~~~~~s~~D~~~~Sg~K~g~~~~GG~i~-~~d~~----l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~-~- 314 (460)
T PRK13238 244 --AREMFSYADGLTMSAKKDAMVNIGGLLC-FRDED----LFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM-D- 314 (460)
T ss_pred --hhhhcccCcEEEEecccCCCCcceeEEE-cChHH----HHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh-C-
Confidence 334567888887788886 44432 43456 777776653 22 233345555777776665310 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC-------------CHHHHHHHhhhccEEEeCC
Q 013839 330 LWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL-------------TPYQVDRLAKEFHIYMTQD 396 (435)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~-------------~~~~~~~ll~~~gI~i~pg 396 (435)
+++.... .+++++|.+.|++.| +.+..|.||+|+++++ +.+++.+|+++.||.+.|+
T Consensus 315 --~~~~~~~----~~~~~~l~~~L~~~G----~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~ 384 (460)
T PRK13238 315 --EDYLAYR----IGQVEYLGEGLEEAG----VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEI 384 (460)
T ss_pred --hHHHHHH----HHHHHHHHHHHHHCC----CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecc
Confidence 0222222 235688999998887 4578899999999854 2347789999999999886
Q ss_pred C---------------------cEEecc--CCCCcHHHHHHHHHHHHHh
Q 013839 397 G---------------------RISMAG--VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 397 g---------------------Ris~~~--~~~e~i~~~~~~l~~~l~~ 422 (435)
| |+++.. .+.+.++++.++|+++.+.
T Consensus 385 ~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 385 GSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred cceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 3 888753 3788899999999987643
No 110
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-32 Score=239.21 Aligned_cols=362 Identities=15% Similarity=0.116 Sum_probs=260.4
Q ss_pred hhhHHHHHhc-CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcC-C----CCCCCCCCcccHHHHHHHHHhHcCCCC
Q 013839 37 INGVTEAFLA-DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-S----EFLESISASVSTKMVEESVKLVYGKDS 110 (435)
Q Consensus 37 ~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~Y~~~~g~~~lr~~ia~~l~~~~~ 110 (435)
+..+++++.+ ...+..|.|+-|+| ...|......+.....+.. + ..-+|..++|...|.+++++.+...++
T Consensus 16 i~~lMdDl~d~Lrt~g~imLggGNP---a~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 16 ITQLMDDLNDGLRTPGAIMLGGGNP---ARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred HHHHHHHHHhhccCCCceeeCCCCc---ccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 4566666654 13367999999997 3335555555655555542 1 234699999999999999999988888
Q ss_pred ccccCCCeeeEecCCchhHHHHHHHHHH-HhCCC--CEEEEc-CCCChhhHHHHhhCCCCeee----eeecCCC--CCCc
Q 013839 111 DVVKEGRSAGVQALSGTGACRLFAEFQR-RFHPE--SHIYFP-DPTWSNHHNIWRDAQIPERT----YHYYDPD--SKSL 180 (435)
Q Consensus 111 ~~~~~~~v~~~~t~gg~~a~~~~~~~~~-~~~~g--d~Vlv~-~p~y~~~~~~~~~~g~~~~~----v~~~~~~--~~~~ 180 (435)
+.+.+.||. +|+|++.+.+.++.+.+ ....| .+|+.| .|.|.+|.++...-.+ .+. +++.+.. .+..
T Consensus 93 wnit~~NIa--lTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~-fVs~kP~iel~~~g~FKY~v 169 (417)
T COG3977 93 WNITAQNIA--LTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL-FVSAKPNIELLPAGQFKYHV 169 (417)
T ss_pred CCCccceee--ecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc-eeeccCCcccccccceeecc
Confidence 888899999 99999999988853332 23345 345555 4889888654221110 111 1111111 1456
Q ss_pred ChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCC
Q 013839 181 DFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEH 260 (435)
Q Consensus 181 d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 260 (435)
|.+++.- . ..+.+|+++.|.||||.+++.+++.+|-++|++||+++|+|.+|..-..+ .- ..... +--.+
T Consensus 170 DF~~l~i--~---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~-ii--fsd~~--~~w~~ 239 (417)
T COG3977 170 DFEHLHI--G---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPG-II--FSDAT--PLWNE 239 (417)
T ss_pred CHHHccc--c---cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCc-ee--ccccc--ccCCC
Confidence 7666632 2 56899999999999999999999999999999999999999998532211 10 00111 12357
Q ss_pred eEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 013839 261 LIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMAD 340 (435)
Q Consensus 261 ~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~ 340 (435)
+++.|.|+||. |+||.|+|.+++ +++ +++.+.+........+...++.+++.+++.+++.+.-++ -+|.
T Consensus 240 NiilC~SLSK~-GLPG~R~GIiIa---ne~----viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseq---VIrP 308 (417)
T COG3977 240 NIILCMSLSKL-GLPGSRCGIIIA---NEK----VIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQ---VIRP 308 (417)
T ss_pred CEEEEeehhhc-CCCCcceeEEEc---cHH----HHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHH---hhhH
Confidence 99999999998 789999999974 888 999999988777788999999999999998876554322 3445
Q ss_pred HHHHHHHHHHHHHHhhCCCCCccccccCcceeEec---C--CCHHHHHHHhhhccEEEeCCC-----------------c
Q 013839 341 RIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS---G--LTPYQVDRLAKEFHIYMTQDG-----------------R 398 (435)
Q Consensus 341 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~---~--~~~~~~~~ll~~~gI~i~pgg-----------------R 398 (435)
.|+++.+...+.|+..-....|..++|+|..|+|+ + ++.+.+.+.|++.|+.++||. |
T Consensus 309 FY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~R 388 (417)
T COG3977 309 FYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMR 388 (417)
T ss_pred HHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEE
Confidence 56666666666665432233578899999999998 3 355555445588999999982 9
Q ss_pred EEeccCCCCcHHHHHHHHHHHHHhhhhh
Q 013839 399 ISMAGVTTGNVNYLANAIHEVTRSEQET 426 (435)
Q Consensus 399 is~~~~~~e~i~~~~~~l~~~l~~~~~~ 426 (435)
+|+.. +++.++.++++|++.+++..+.
T Consensus 389 mn~~~-~~~~ie~Gva~lae~ve~~yq~ 415 (417)
T COG3977 389 MNYVP-EPEKIEKGVAILAEEVERAYQE 415 (417)
T ss_pred EecCC-CHHHHHHHHHHHHHHHHHHHhc
Confidence 99976 8899999999999999876653
No 111
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.4e-31 Score=258.03 Aligned_cols=332 Identities=19% Similarity=0.237 Sum_probs=252.8
Q ss_pred eeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHH
Q 013839 53 INLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRL 132 (435)
Q Consensus 53 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~ 132 (435)
|||+.|.+ +. ...+....+....-.......|.+..|..++++.+++++......+...+++. +++|+++++..
T Consensus 1 ~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~--~~~~~t~a~~~ 74 (350)
T cd00609 1 IDLSIGEP-DF---PPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIV--VTNGAQEALSL 74 (350)
T ss_pred CCCCCCCC-CC---CCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEE--EecCcHHHHHH
Confidence 57888886 22 33333333333322233356789999999999999999954322112245677 89999999988
Q ss_pred HHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcCh--HhHHHHhhcCCCCcEEEEeCCCCCCCCC
Q 013839 133 FAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDF--AALMDDIKNAPDSSFFLLHPSAHNPTGV 210 (435)
Q Consensus 133 ~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~--e~l~~~i~~~~~~~~~v~~~~p~NPtG~ 210 (435)
+ +..+..+||+|++++|+|.++...++..|.+++.++.. ++...+. +.++.... ++++++++++|+||||.
T Consensus 75 ~--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~ 147 (350)
T cd00609 75 L--LRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLD--EEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGA 147 (350)
T ss_pred H--HHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecc--cccCCccCHHHHHhhcC---ccceEEEEECCCCCCCc
Confidence 8 66667889999999999999999999999999999883 2333443 55555444 67889999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh-
Q 013839 211 DPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS- 289 (435)
Q Consensus 211 ~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~- 289 (435)
.++.+++++|.++|+++|+++|+|++|..+.+.+.. . ......+..+.+++++|++|.++.+|.|+||+++ ++
T Consensus 148 ~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~--~-~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~---~~~ 221 (350)
T cd00609 148 VLSEEELEELAELAKKHGILIISDEAYAELVYDGEP--P-PALALLDAYERVIVLRSFSKTFGLPGLRIGYLIA---PPE 221 (350)
T ss_pred ccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcc--c-ccccCcCccCcEEEEeecccccCCcccceEEEec---CHH
Confidence 999999999999999999999999999887765321 1 1111234456789999999999989999999964 55
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL 369 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 369 (435)
+ +.+.++......+.+++...+.++..++.... +..++.++++.++++.+.+.|++.+.. ....+.+
T Consensus 222 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~~~ 288 (350)
T cd00609 222 E----LLERLKKLLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALKELGPL---VVVKPSG 288 (350)
T ss_pred H----HHHHHHHHHHhcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHhcCCc---cccCCCc
Confidence 7 77777777666667889999999988888653 556788888999999999999988642 2245677
Q ss_pred ceeEecCC----CHHHHHHHhhhccEEEeCC------C----cEEeccCCCCcHHHHHHHHH
Q 013839 370 GMFCFSGL----TPYQVDRLAKEFHIYMTQD------G----RISMAGVTTGNVNYLANAIH 417 (435)
Q Consensus 370 g~~~~~~~----~~~~~~~ll~~~gI~i~pg------g----Ris~~~~~~e~i~~~~~~l~ 417 (435)
|+++|+.+ +.+.+.++++++||.+.++ + |++++.. .+++++++++|+
T Consensus 289 g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 289 GFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred cEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 88999866 2456777888899999986 2 9999874 888999998875
No 112
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-31 Score=237.41 Aligned_cols=340 Identities=16% Similarity=0.166 Sum_probs=266.4
Q ss_pred ccchHHHHHHHHhc--CCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCE
Q 013839 68 VVLQCVREAEAKIA--GSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESH 145 (435)
Q Consensus 68 ~~~~~~~~~~~~~~--~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~ 145 (435)
+|..+++++..-+. .+....|..++|++-.|+.+|+++..+++.+.++++|. +|.|++.|+..++.++ +-.+.+.
T Consensus 87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~--LT~GAS~ai~~il~l~-~~~~~~G 163 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIF--LTTGASPAIRSILSLL-IAGKKTG 163 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHee--ecCCCcHHHHHHHHHH-hcCCCCc
Confidence 34556666655554 34567799999999999999999988888878899999 9999999998884322 1236799
Q ss_pred EEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 013839 146 IYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA--PDSSFFLLHPSAHNPTGVDPTEEQWREISYQ 223 (435)
Q Consensus 146 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~--~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~ 223 (435)
|++|.|.|+-|...+..+|+..++|.+.++.+|.+|.++|++.+.++ .-+++++++.||.||||.+++.+.+++|+.+
T Consensus 164 vliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~f 243 (475)
T KOG0258|consen 164 VLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICF 243 (475)
T ss_pred eEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHH
Confidence 99999999999999999999999999976678999999999998775 3457899999999999999999999999999
Q ss_pred HHhcCceeeeeccCCCccCCCCcccHHHHHHhhh-c------CCeEEEEecccccc-cccCCcccEEEEEecChhHHHHH
Q 013839 224 FKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE-D------EHLIGCAQSYAKSM-GLYGHRVGCLSILCVDSKQAAAI 295 (435)
Q Consensus 224 ~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~-~------~~~~i~~~s~SK~~-g~~G~RvG~~~~~~~~~~~~~~~ 295 (435)
|++++++++.||+|++..|.+. ...+++..... . ....+.++|.||.+ |-.|.|-||+-++..+++ +
T Consensus 244 a~~~~l~llaDEVYQ~Nvy~~~-skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~pr----v 318 (475)
T KOG0258|consen 244 AAEEGLVLLADEVYQDNVYTTG-SKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPR----V 318 (475)
T ss_pred HHHcCeEEechHHHHhhccCCC-cchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChh----H
Confidence 9999999999999999998742 34555544321 1 22457788999985 668999999987555666 6
Q ss_pred HHHHHHHhhccccCCChhHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcce
Q 013839 296 RSQIQQIARAMYGSPPVHGILLVATILSDP----NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGM 371 (435)
Q Consensus 296 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~----~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~ 371 (435)
.+.+.+... .-.+++..+|..+......+ .-.+.|......+...+++++..+.+.++++.. +.+.+++|.|
T Consensus 319 ~~qi~Kl~s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~g---i~cn~~qGAM 394 (475)
T KOG0258|consen 319 KQQIKKLAS-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEG---ISCNPVQGAM 394 (475)
T ss_pred HHHHHHHHh-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCc---eeeccCccce
Confidence 666666443 34567777787776666432 234556677778888999999999999998864 7899999999
Q ss_pred eEecCC---------------CHH-H-HHHHhhhccEEEeCCC-----------cEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 372 FCFSGL---------------TPY-Q-VDRLAKEFHIYMTQDG-----------RISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 372 ~~~~~~---------------~~~-~-~~~ll~~~gI~i~pgg-----------Ris~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
|+|..+ .++ + +.+||++.||.++||. |.++-. .. + ..+++++++=.+.
T Consensus 395 Y~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp--~~-~-~~i~~~~~fH~~f 470 (475)
T KOG0258|consen 395 YLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP--PG-L-EIIEKFKKFHAEF 470 (475)
T ss_pred eecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC--ch-h-HHHHHHHHHHHHH
Confidence 999844 222 3 4889999999999982 888843 33 4 7777777665443
No 113
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=3.3e-28 Score=236.24 Aligned_cols=333 Identities=14% Similarity=0.118 Sum_probs=234.4
Q ss_pred CCCCeeeeecceecCCCCCcccc---hHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVL---QCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.+.+.+.|..+++..+ +..++ +...++..++..+. ..|.++.|.++|++++++++ +. ++++ .|+
T Consensus 9 ~g~n~~~l~~~~v~iD--lltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~-g~-------~~vv--~t~ 75 (431)
T cd00617 9 AGYNVFLLRSEDVYID--LLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLF-GF-------KHII--PTH 75 (431)
T ss_pred cCCCEEeCCCCCcCCC--CCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHH-CC-------CeEE--EcC
Confidence 6788999999986222 13333 33334445555553 45999999999999999998 33 2555 899
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCC--------CCCcChHhHHHHhhcC-CCC
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPD--------SKSLDFAALMDDIKNA-PDS 195 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~e~l~~~i~~~-~~~ 195 (435)
||++|+.++ +.+++.|||.| +++|.|..+...+...|++++.+++.... .+.+|+++|++.+++. .++
T Consensus 76 ~Gt~Al~la--~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~ 152 (431)
T cd00617 76 QGRGAENIL--FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAEN 152 (431)
T ss_pred CHHHHHHHH--HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCC
Confidence 999999988 77789999988 68999999999999999999999884221 2459999999999743 234
Q ss_pred cEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCceeeeeccCCC--ccC-----CCCcccHHHHHHhhhcCCeEEEEec
Q 013839 196 SFFLLHPSAHNPT-GVDPTEEQWREISYQFKVKGHFPFFDMAYQG--FAS-----GDLDKDAQAIRIFLEDEHLIGCAQS 267 (435)
Q Consensus 196 ~~~v~~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~--~~~-----~~~~~~~~~~~~~~~~~~~~i~~~s 267 (435)
++++++++||||+ |..++.+++++|.++|++||++||+|++... ..+ ++. ...++. +.++.+.|
T Consensus 153 ~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~--~~~si~------ei~~e~~s 224 (431)
T cd00617 153 IPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGY--RDKSIA------EIAREMFS 224 (431)
T ss_pred ccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccc--cCCCHH------HHHHHhhc
Confidence 7899999999998 9999999999999999999999999999321 111 110 111221 12345678
Q ss_pred ccccccccCCc------ccEEEEEecChhHHHHHHHHHHHHh----hcc-ccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 013839 268 YAKSMGLYGHR------VGCLSILCVDSKQAAAIRSQIQQIA----RAM-YGSPPVHGILLVATILSDPNLKSLWIDEVK 336 (435)
Q Consensus 268 ~SK~~g~~G~R------vG~~~~~~~~~~~~~~~~~~l~~~~----~~~-~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~ 336 (435)
+||.+.++|+| .||++ +++++ ++++++... ... ..+.+.....+++..|.+.. + .+
T Consensus 225 ~sd~~~mS~~K~~~~~~GG~i~--~~d~~----l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~------~-~~ 291 (431)
T cd00617 225 YADGCTMSAKKDGLVNIGGFLA--LRDDE----LYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV------E-ED 291 (431)
T ss_pred cCCEEEEEeecCCCCccceEEE--eCcHH----HHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc------c-HH
Confidence 88888888888 45775 54556 666666432 111 12333333333333554321 1 12
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC-------------HHHHHHHhhhccEEEeCC-------
Q 013839 337 IMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT-------------PYQVDRLAKEFHIYMTQD------- 396 (435)
Q Consensus 337 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-------------~~~~~~ll~~~gI~i~pg------- 396 (435)
...++++ +++++.+.|++.| +.+..|.+|+++|++.. .+++.+|+++.||.+..-
T Consensus 292 ~l~~~~~-~r~~l~~~L~~~G----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~ 366 (431)
T cd00617 292 YLRHRVE-QVRYLGDRLDEAG----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGR 366 (431)
T ss_pred HHHHHHH-HHHHHHHHHHHCC----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceeccc
Confidence 3344444 4488999999998 45788999999999542 245678889999997631
Q ss_pred ----C----------cEEecc--CCCCcHHHHHHHHHHHHHh
Q 013839 397 ----G----------RISMAG--VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 397 ----g----------Ris~~~--~~~e~i~~~~~~l~~~l~~ 422 (435)
| |+++.. .+.+.++++.++|..+.++
T Consensus 367 ~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 367 DPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 1 887642 3789999999999998865
No 114
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=2.3e-27 Score=232.43 Aligned_cols=327 Identities=14% Similarity=0.111 Sum_probs=222.6
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCc---cc----HHHHHHHHHhHcCCCCccccCCCeee
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISAS---VS----TKMVEESVKLVYGKDSDVVKEGRSAG 120 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~l~~~~~~~~~~~~v~~ 120 (435)
++.++|+|+.|+|+.. ..+++.++++...+... ...|+++. |. .++++++++++. . + +++
T Consensus 36 ~g~~~i~~~~~~~lg~---~~~~~v~~~~~~~~~~~-~~~~~~s~~~~G~~~~~~~le~~ia~~~g-~------~-~~i- 102 (393)
T TIGR01822 36 DGREVLNFCANNYLGL---SSHPDLIQAAKDALDEH-GFGMSSVRFICGTQDIHKELEAKIAAFLG-T------E-DTI- 102 (393)
T ss_pred CCceEEEeeCCCcccc---CCCHHHHHHHHHHHHHh-CCCCCCcCcccCChHHHHHHHHHHHHHhC-C------C-cEE-
Confidence 5678999999998444 55666666666666431 12466655 75 889999999984 3 1 344
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC---CCCcE
Q 013839 121 VQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA---PDSSF 197 (435)
Q Consensus 121 ~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~ 197 (435)
++.||++|+..+ +.+++++||+|++++|.|+.+...++..+.+.+.++ .+|++++++.+.+. ..+++
T Consensus 103 -i~~~~~~a~~~~--~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 103 -LYASCFDANGGL--FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred -EECchHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCce
Confidence 678999998877 667789999999999999999888888877765432 36889999988742 12678
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhc-CCeEEEEecccccccccC
Q 013839 198 FLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLED-EHLIGCAQSYAKSMGLYG 276 (435)
Q Consensus 198 ~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~g~~G 276 (435)
++++++++||||.+.+ +++|+++|++||+++|+||+|.....+. ...+.....+. .+.+++++|+||.++ |
T Consensus 173 ~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~---~~~~~~~~~~~~~~~di~~~s~sK~l~--g 244 (393)
T TIGR01822 173 LIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGP---TGRGSHELCGVMGRVDIITGTLGKALG--G 244 (393)
T ss_pred EEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCC---CCCchHHhcCCCCCCeEEEEEChHHhh--C
Confidence 9999999999999865 6699999999999999999984322211 11111111121 246799999999874 7
Q ss_pred CcccEEEEEecChhHHHHHHHHHHHHhhc-cccC-CChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 277 HRVGCLSILCVDSKQAAAIRSQIQQIARA-MYGS-PPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLE 354 (435)
Q Consensus 277 ~RvG~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 354 (435)
+|+||+++ +++ +++.+++.... ...+ .+...+.++..++... +..++.+++++++++++.+.|+
T Consensus 245 ~r~G~~~~---~~~----~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~ 310 (393)
T TIGR01822 245 ASGGFTTA---RKE----VVELLRQRSRPYLFSNSLPPAVVGASIKVLEML-------EASNELRDRLWANTRYFRERME 310 (393)
T ss_pred CCcEEEEe---CHH----HHHHHHHhCccceecCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHH
Confidence 89999864 888 77777654322 2222 2333344444444211 2345677889999999999998
Q ss_pred hhCCCCCccccccCcceeEecCC---C-HHHHHHHhhhccEEEeC-------CC----cEEeccC-CCCcHHHHHHHHHH
Q 013839 355 KLGSSLNWEHITNQLGMFCFSGL---T-PYQVDRLAKEFHIYMTQ-------DG----RISMAGV-TTGNVNYLANAIHE 418 (435)
Q Consensus 355 ~~~~~~~~~~~~~~~g~~~~~~~---~-~~~~~~ll~~~gI~i~p-------gg----Ris~~~~-~~e~i~~~~~~l~~ 418 (435)
+.|. .+..+.+.++.+.-. + .+++..|+ ++||.+.. .+ |++++.. +++++++++++|++
T Consensus 311 ~~g~----~~~~~~~~~~~i~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 311 AAGF----DIKPADHPIIPVMLYDAVLAQRFARRLL-EEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred HcCC----CCCCCCCCEEEEEeCCHHHHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 8763 333444443332211 2 23445554 56999862 12 7776543 78999999999999
Q ss_pred HHHhhh
Q 013839 419 VTRSEQ 424 (435)
Q Consensus 419 ~l~~~~ 424 (435)
+.++.+
T Consensus 386 ~~~~~~ 391 (393)
T TIGR01822 386 IGRELG 391 (393)
T ss_pred HHHHhC
Confidence 876543
No 115
>PRK10534 L-threonine aldolase; Provisional
Probab=99.96 E-value=5.2e-28 Score=231.61 Aligned_cols=317 Identities=11% Similarity=0.014 Sum_probs=211.1
Q ss_pred eeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHH
Q 013839 52 KINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACR 131 (435)
Q Consensus 52 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~ 131 (435)
.|||++++ + +.|++.+.+++.....+ ...|.|..+..+|++++++++ +.. .+. ++.||++++.
T Consensus 1 ~~~~~~~~----~--~~p~~~~~~a~~~~~~~-~~~Y~~~~~~~~L~~~la~~~-g~~-------~~~--v~~~g~~a~~ 63 (333)
T PRK10534 1 MIDLRSDT----V--TRPSRAMLEAMMAAPVG-DDVYGDDPTVNALQDYAAELS-GKE-------AAL--FLPTGTQANL 63 (333)
T ss_pred Cccccccc----C--CCCCHHHHHHHHhccCC-CcccCCCHHHHHHHHHHHHHh-CCC-------eEE--EeCchHHHHH
Confidence 36777777 2 23556666665554444 455877788999999999997 331 233 6888888877
Q ss_pred HHHHHHHHhCCCCEEEEcCCCChh-hHHH-HhhCC-CCeeeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCC
Q 013839 132 LFAEFQRRFHPESHIYFPDPTWSN-HHNI-WRDAQ-IPERTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAH 205 (435)
Q Consensus 132 ~~~~~~~~~~~gd~Vlv~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~ 205 (435)
+. +..++.+||+|+++.|+|.. |... ....+ ++++.++. .+++.+|+++|++++... ..++++++++||+
T Consensus 64 ~~--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~ 139 (333)
T PRK10534 64 VA--LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA--AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH 139 (333)
T ss_pred HH--HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecC--CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC
Confidence 76 66678899999999888753 3211 23333 57777776 346889999999988621 0157899998655
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCccc-EEEE
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVG-CLSI 284 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG-~~~~ 284 (435)
||.+++.+++++|+++|++|++++++||+|............ .......+.++ .||||.+|++ +| |++
T Consensus 140 --~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~---~~~~~~~~~~~--~s~SK~~~~~---~G~~~~- 208 (333)
T PRK10534 140 --NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCEL---KEITQYCDSFT--ICLSKGLGTP---VGSLLV- 208 (333)
T ss_pred --CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCH---HHHHhcCCEEE--EEeEcCCCCc---ccceEE-
Confidence 599999999999999999999999999997622110000111 11222223333 4899998754 68 564
Q ss_pred EecChhHHHHHHHHHHHHhhccccC--CChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 013839 285 LCVDSKQAAAIRSQIQQIARAMYGS--PPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNW 362 (435)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 362 (435)
+ +++ +++.+++.......+ .+.+.|.++...|.+ .. +..++..+.++++.+.|+++| +
T Consensus 209 -~-~~~----~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~---------~~-~~~~~~~~~r~~l~~~L~~~g----~ 268 (333)
T PRK10534 209 -G-NRD----YIKRARRWRKMTGGGMRQAGILAAAGLYALKH---------NV-ARLQEDHDNAAWLAEQLREAG----A 268 (333)
T ss_pred -c-CHH----HHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh---------hH-HHHHHHHHHHHHHHHHHHhCC----C
Confidence 3 888 888887765532212 223444444444421 11 222234446788999999887 4
Q ss_pred cccccCcceeEecCCC---HHHHHHHhhhccEEEeCCC--cEEec-cCCCCcHHHHHHHHHHHHH
Q 013839 363 EHITNQLGMFCFSGLT---PYQVDRLAKEFHIYMTQDG--RISMA-GVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 363 ~~~~~~~g~~~~~~~~---~~~~~~ll~~~gI~i~pgg--Ris~~-~~~~e~i~~~~~~l~~~l~ 421 (435)
.+.++ .++|+|+.+. .+.+.++|+++||.++|+. |++.+ ..+.+++++++++|++++.
T Consensus 269 ~~~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 269 DVMRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASPIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ccCCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 56656 4778888763 4456667788999999985 88753 3488999999999987753
No 116
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.96 E-value=8.4e-28 Score=236.00 Aligned_cols=332 Identities=14% Similarity=0.087 Sum_probs=220.5
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCC--CCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEF--LESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
++++.|||+.|.|++. +.++...+.+...+..... ..|....|.+++++++++++....+. ++++. +++|
T Consensus 40 ~g~~~i~l~~~~~~~~---~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~--~tsG 111 (397)
T PRK06939 40 DGKEVINFCANNYLGL---ANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAIL--YSSC 111 (397)
T ss_pred CCCeEEEeeccCcccc---CCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEE--EcCh
Confidence 5778999999986343 4555555555555542111 22333578888888888777433222 34555 5554
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhc---CCCCcEEEEeC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKN---APDSSFFLLHP 202 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~v~~~ 202 (435)
++++..+ +.++++|||+|++++|+|+.+...+...|++++.++. .|++++++.+.+ ...++++++++
T Consensus 112 -~~a~~~~--~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~ 181 (397)
T PRK06939 112 -FDANGGL--FETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATD 181 (397)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEe
Confidence 7787776 6677899999999999999999888999988877653 378888888764 12367888888
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEE
Q 013839 203 SAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCL 282 (435)
Q Consensus 203 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~ 282 (435)
+.+||||.. +++++|.++|++|++++|+||+|.....+.. .........-..+.+++++|+||.++ |+|+||+
T Consensus 182 ~v~~~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v 254 (397)
T PRK06939 182 GVFSMDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGEN--GRGTVEHFGVMDRVDIITGTLGKALG--GASGGYT 254 (397)
T ss_pred cCcCCCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCC--CCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEE
Confidence 889999974 4577999999999999999999953222110 01111111111245799999999984 5699999
Q ss_pred EEEecChhHHHHHHHHHHHHhhc-cccCC-ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 013839 283 SILCVDSKQAAAIRSQIQQIARA-MYGSP-PVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSL 360 (435)
Q Consensus 283 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~~-~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 360 (435)
++ +++ +++.+...... ...+. +...+.++.++++.. +..++.+++++++++.+.+.|++++.
T Consensus 255 ~~---~~~----~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~-- 318 (397)
T PRK06939 255 AG---RKE----VIDWLRQRSRPYLFSNSLAPAIVAASIKVLELL-------EESDELRDRLWENARYFREGMTAAGF-- 318 (397)
T ss_pred Ee---CHH----HHHHHHHhCccccccCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHcCC--
Confidence 64 777 77777654332 12222 233334443444211 12246778899999999999988763
Q ss_pred CccccccCcceeEec-C--CC-HHHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHHHHhh
Q 013839 361 NWEHITNQLGMFCFS-G--LT-PYQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 361 ~~~~~~~~~g~~~~~-~--~~-~~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~l~~~ 423 (435)
....+.++++.+. . .+ .+++..+++ +||.+.++ + |++++. .+++++++++++|++++++.
T Consensus 319 --~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 319 --TLGPGEHPIIPVMLGDAKLAQEFADRLLE-EGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred --CcCCCCCCEEEEEECCHHHHHHHHHHHHH-CCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 3445566665433 2 12 334566654 59998742 1 888753 48899999999999988764
No 117
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=7.7e-28 Score=239.07 Aligned_cols=328 Identities=10% Similarity=0.024 Sum_probs=228.8
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcC------CCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeE
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG------SEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGV 121 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~ 121 (435)
++++.|||+.|++++. ..+++..+++.+++.. +....|.+..++.+|++++++++.. ++.+.
T Consensus 107 ~G~~~id~~s~~~lgl---~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-------~~~i~-- 174 (481)
T PLN02822 107 NGKDVVNFASANYLGL---IGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-------PDSIL-- 174 (481)
T ss_pred CCceEEEeECCCcCCC---CCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-------CCEEE--
Confidence 5678999999987555 3444455555555542 1123578888899999999999842 34565
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhc---C---CCC
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKN---A---PDS 195 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~---~---~~~ 195 (435)
++.|++ ++..+ +.+++++||.|++....+..+...+...|.+++.++.+ |.++++..+++ . .++
T Consensus 175 ~s~G~~-a~~sa--i~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~ 244 (481)
T PLN02822 175 YSYGLS-TIFSV--IPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKK 244 (481)
T ss_pred ECCHHH-HHHHH--HHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCC
Confidence 565555 55555 66778999999988777777777778888888888763 23333333321 1 123
Q ss_pred c-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhc--CCeEEEEecccccc
Q 013839 196 S-FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLED--EHLIGCAQSYAKSM 272 (435)
Q Consensus 196 ~-~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~SK~~ 272 (435)
+ ++|+++.++|+||.+.+ +++|.++|++||+++|+||+|....++.. ...+....+. .+.+++++||||.+
T Consensus 245 ~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~---G~G~~e~~~v~~~~~dii~~s~sKal 318 (481)
T PLN02822 245 LRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKS---GRGLSEHFGVPIEKIDIITAAMGHAL 318 (481)
T ss_pred CcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC---CCChHHHcCCCCCCCeEEEecchhhh
Confidence 3 79999999999999998 67999999999999999999985555421 1111122121 35679999999999
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHHhhccccC--CChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGS--PPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLR 350 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 350 (435)
|++| ||+++ +++ +++.++.......++ .|+..+.++.++|+.. +...+.+++++++++++.
T Consensus 319 g~~G---G~i~g---~~~----ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l-------~~~~~~~~~l~~~~~~l~ 381 (481)
T PLN02822 319 ATEG---GFCTG---SAR----VVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-------EDNPSVLAKLKENIALLH 381 (481)
T ss_pred hhCC---eEEEc---CHH----HHHHHHhcCCceeeccccCHHHHHHHHHHHHHH-------HhCHHHHHHHHHHHHHHH
Confidence 9888 99964 888 777777544433443 3466667766676421 222567788999999999
Q ss_pred HHHHhhCCCCCccccccCcceeEecCCC-------------HHHHHHHhhhccEEEeCC------------C-cEEecc-
Q 013839 351 QNLEKLGSSLNWEHITNQLGMFCFSGLT-------------PYQVDRLAKEFHIYMTQD------------G-RISMAG- 403 (435)
Q Consensus 351 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~-------------~~~~~~ll~~~gI~i~pg------------g-Ris~~~- 403 (435)
+.|++.. ++.+..+.+++++++.+. .+++..+++++||.+.++ + |++++.
T Consensus 382 ~~L~~~~---g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~ 458 (481)
T PLN02822 382 KGLSDIP---GLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAG 458 (481)
T ss_pred HHHHhcC---CcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCC
Confidence 9998862 144555667778777442 235577776789999964 1 887653
Q ss_pred CCCCcHHHHHHHHHHHHHhh
Q 013839 404 VTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 404 ~~~e~i~~~~~~l~~~l~~~ 423 (435)
.++++|++++++|++++.+.
T Consensus 459 ~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 459 HTESDILKASESLKRVAASV 478 (481)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 48999999999999988764
No 118
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=4.1e-27 Score=234.35 Aligned_cols=376 Identities=15% Similarity=0.109 Sum_probs=241.3
Q ss_pred hhHHHHHhhhhhhhccccccccccccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCC-CcccchHHHHHHHHh
Q 013839 2 YWRYLTRAARRCSVHTTSSRTVGWWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKG-RPVVLQCVREAEAKI 80 (435)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~-~~~~~~~~~~~~~~~ 80 (435)
|.|++-++++-|+-.-+.+..-.+++-+.+...+. .... .+ .....+.+||++.+|..... .+.+.+.+.+++.+.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~ 131 (489)
T PLN02483 55 YIRRLYLRIQDCFNRPIASAPDAWFDVVERVSNDN-NKTL-KR-TTKTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKY 131 (489)
T ss_pred HHHHhhhhcccccCCCCCCCCCCeEEEEEeecCCC-CceE-Ee-cCCCceEEEeecCCccCcCCCCHHHHHHHHHHHHHh
Confidence 77888899999995544433222222222222111 0100 11 12357899999999866543 233455666666665
Q ss_pred cC---CCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH
Q 013839 81 AG---SEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH 157 (435)
Q Consensus 81 ~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~ 157 (435)
.. +....|+...++.++++++|+++. . ++.++ +.+|..+...+ +.+++.+||.|++++|+|..+.
T Consensus 132 g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~------~~ai~---~~~G~~an~~~--i~al~~~Gd~Vi~d~~~h~s~~ 199 (489)
T PLN02483 132 SASTCSSRVDGGTTKLHRELEELVARFVG-K------PAAIV---FGMGYATNSTI--IPALIGKGGLIISDSLNHNSIV 199 (489)
T ss_pred CCCCCccccccCCcHHHHHHHHHHHHHhC-C------CcEEE---ECCHHHHHHHH--HHHhCCCCCEEEEcchhhHHHH
Confidence 42 233458888899999999999994 3 33444 45566665555 6667899999999999999999
Q ss_pred HHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC----CCC-----cE-EEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 013839 158 NIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA----PDS-----SF-FLLHPSAHNPTGVDPTEEQWREISYQFKVK 227 (435)
Q Consensus 158 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~----~~~-----~~-~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~ 227 (435)
..++..|++++.++.+ |++++++.+++. .++ .+ ++++....|++|... ++++|+++|++|
T Consensus 200 ~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~---~l~~I~~la~~~ 269 (489)
T PLN02483 200 NGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC---KLPEIVAVCKKY 269 (489)
T ss_pred HHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc---CHHHHHHHHHHc
Confidence 9999999999988752 455665555421 011 24 555555668999775 566999999999
Q ss_pred CceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhc--
Q 013839 228 GHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARA-- 305 (435)
Q Consensus 228 ~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~-- 305 (435)
++++|+||+|.....+............ +..+.+|+++||||.+|++| ||+++ +++ +++.++.....
T Consensus 270 ~~~livDEa~s~g~~G~~G~g~~~~~~v-~~~~~dI~~~SfSKs~g~~G---G~i~~---~~~----li~~l~~~~~~~~ 338 (489)
T PLN02483 270 KAYVYLDEAHSIGAVGKTGRGVCELLGV-DPADVDIMMGTFTKSFGSCG---GYIAG---SKE----LIQYLKRTCPAHL 338 (489)
T ss_pred CCEEEEECcCccCccCCCCCchHHhcCC-CcccCcEEEEecchhcccCc---eEEEc---CHH----HHHHHHHhCcccc
Confidence 9999999998643322100111111111 22356899999999999877 99964 888 88888775432
Q ss_pred -cccCCChhHHHHHHHHhC----ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC---
Q 013839 306 -MYGSPPVHGILLVATILS----DPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL--- 377 (435)
Q Consensus 306 -~~~~~~~~~q~~~~~~l~----~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~--- 377 (435)
....++...|. +.++|+ +.. .+...+.+++++++++++++.|+++|. .+..+.+++.+|+-+
T Consensus 339 ~~~~~~p~~~~~-~~aaL~~l~~~~g-----~~~~~~~~~~l~~~~~~l~~~L~~~G~----~v~~~~~sp~~~l~l~~~ 408 (489)
T PLN02483 339 YATSMSPPAVQQ-VISAIKVILGEDG-----TNRGAQKLAQIRENSNFFRSELQKMGF----EVLGDNDSPVMPIMLYNP 408 (489)
T ss_pred ccCCcCHHHHHH-HHHHHHHHHhCcc-----ccchHHHHHHHHHHHHHHHHHHHHCCC----cccCCCCCCEEEEEECCH
Confidence 11223333333 333332 110 023345578899999999999999873 344444444444322
Q ss_pred -C-HHHHHHHhhhccEEEeCC---------C--cEEecc-CCCCcHHHHHHHHHHHHHhhh
Q 013839 378 -T-PYQVDRLAKEFHIYMTQD---------G--RISMAG-VTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 378 -~-~~~~~~ll~~~gI~i~pg---------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~~ 424 (435)
. .++.+.++ ++||.+.+. + ||+++. .++|++++++++|+++++.+.
T Consensus 409 ~~~~~~~~~Ll-~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 409 AKIPAFSRECL-KQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred HHHHHHHHHHH-HCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 2 24556665 579999842 1 888864 488999999999999987654
No 119
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.96 E-value=4.2e-27 Score=214.50 Aligned_cols=317 Identities=17% Similarity=0.152 Sum_probs=211.3
Q ss_pred CCCCC-CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH---hC-CC----------CEEEE
Q 013839 84 EFLES-ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR---FH-PE----------SHIYF 148 (435)
Q Consensus 84 ~~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~---~~-~g----------d~Vlv 148 (435)
+..+| +...|+|++|+..++.+ +.. +++|+ .||+.++.++...+.. .. +| -+.++
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~ll-gv~-----~~~vi----v~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLC 129 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELL-GVP-----PENVI----VGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLC 129 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHH-TS------GGGEE----E-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEE
T ss_pred cccCCCCccCChHHHHHHHHHHh-CCC-----HHHEE----EeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEe
Confidence 45689 88999999999999998 433 55665 5888888887632221 11 11 36799
Q ss_pred cCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH-HHhc
Q 013839 149 PDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQ-FKVK 227 (435)
Q Consensus 149 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~-~~~~ 227 (435)
|.|+|..+..+.+.+|++.+.||+. ++ |+|+|.+++.+.+.+....+.+++.-+||||.++|.+..++++++ ....
T Consensus 130 PvPGYDRHFai~E~~Giemi~VpM~-~d--GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~ 206 (425)
T PF12897_consen 130 PVPGYDRHFAITEHFGIEMIPVPMT-ED--GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAP 206 (425)
T ss_dssp EES--HHHHHHHHHCT-EEEEEEEE-TT--EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SST
T ss_pred cCCCchHHHHHHHhhCcEEEecCCC-CC--CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCc
Confidence 9999999999999999999999994 44 899999999998776667788899999999999999999999998 4467
Q ss_pred CceeeeeccCCCccCC-CCcccH-HHHHH---hhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHH
Q 013839 228 GHFPFFDMAYQGFASG-DLDKDA-QAIRI---FLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI 302 (435)
Q Consensus 228 ~~~vi~Deay~~~~~~-~~~~~~-~~~~~---~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~ 302 (435)
++.|+.|++|.-.... +.+... ..+.. -++..++++.+.|.||.- ++|.+|+++. + +++ .++.++++
T Consensus 207 DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~a--a-S~~----Nl~~~~~~ 278 (425)
T PF12897_consen 207 DFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFA--A-SEA----NLAWIKKH 278 (425)
T ss_dssp T-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEE--E--HH----HHHHHHHH
T ss_pred CeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeee--c-CHH----HHHHHHHH
Confidence 9999999999766652 111111 13322 245678999999999995 5999999995 3 777 77778887
Q ss_pred hhccccCCChhHHHHHHHHhCCh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCCCCccccccCcceeEecCC--
Q 013839 303 ARAMYGSPPVHGILLVATILSDP--NLKSLWIDEVKIMADRIQRKRTTLRQNLE-KLGSSLNWEHITNQLGMFCFSGL-- 377 (435)
Q Consensus 303 ~~~~~~~~~~~~q~~~~~~l~~~--~l~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~g~~~~~~~-- 377 (435)
....+.++..+.|..-..++++. ++..++++|.+-++.++...-+.|.+.|. ..+. ..+..|+||+|+++..
T Consensus 279 ~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~i---a~Wt~P~GGYFIsld~~~ 355 (425)
T PF12897_consen 279 LSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGI---ASWTKPKGGYFISLDVLD 355 (425)
T ss_dssp HHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTS---EEE---SBSS-EEEEEST
T ss_pred hcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCe---eEecCCCCceEEEEecCC
Confidence 77788999999999999999974 46666666666666666666666666666 4443 4677899999999855
Q ss_pred -CHHHHHHHhhhccEEEeCCC--------------cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 378 -TPYQVDRLAKEFHIYMTQDG--------------RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 378 -~~~~~~~ll~~~gI~i~pgg--------------Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
++..+.++.++.||.++|.| ||+.+..+.++++.+++.+.-.++...
T Consensus 356 G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~la~ 417 (425)
T PF12897_consen 356 GTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKLAA 417 (425)
T ss_dssp T-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56677777799999999964 999877788999999999987765433
No 120
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=5.8e-27 Score=227.01 Aligned_cols=322 Identities=15% Similarity=0.088 Sum_probs=213.9
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcC-CC-CCCCCCCc----ccHHHHHHHHHhHcCCCCccccCCCeeeE
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-SE-FLESISAS----VSTKMVEESVKLVYGKDSDVVKEGRSAGV 121 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~Y~~~~----g~~~lr~~ia~~l~~~~~~~~~~~~v~~~ 121 (435)
++++.|||+.|+| -+++.++++++.+.+.+.. +. ...|.... ...++++++++++. . +++++
T Consensus 14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-~------~~~i~-- 81 (360)
T TIGR00858 14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-T------EAALL-- 81 (360)
T ss_pred CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-C------CCEEE--
Confidence 5778999999975 2334444555544444432 10 11122222 34568888888873 2 34555
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC-CCcEEEE
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP-DSSFFLL 200 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~v~ 200 (435)
+.+|++++..+ +.+++.+||+|++++|+|..+...++..|++++.++. +|++.+++.+++.. +++++++
T Consensus 82 -~~~G~~~~~~~--l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~ 151 (360)
T TIGR00858 82 -FSSGYLANVGV--ISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIV 151 (360)
T ss_pred -ECchHHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEE
Confidence 44556665555 5556789999999999999999888999998877653 48889999887432 3578999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCccc
Q 013839 201 HPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVG 280 (435)
Q Consensus 201 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG 280 (435)
+++++||||...+ +++|.++|+++++++|+||+|..+.++............ ...+++|+++|+||.++++| |
T Consensus 152 ~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~g---G 224 (360)
T TIGR00858 152 TDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGL-KPEPVDIQVGTLSKALGSYG---A 224 (360)
T ss_pred EeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCC-CccCCcEEEEechhhhhccC---c
Confidence 9999999998765 568999999999999999998765543211111121111 12367899999999999776 9
Q ss_pred EEEEEecChhHHHHHHHHHHHHhhc-c-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 013839 281 CLSILCVDSKQAAAIRSQIQQIARA-M-YGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGS 358 (435)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 358 (435)
|+++ +++ +++.+...... . ..+.+...+.++..+++.. ...+..+++++++++++.+.|++++.
T Consensus 225 ~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~ 290 (360)
T TIGR00858 225 YVAG---SQA----LIDYLINRARTLIFSTALPPAVAAAALAALELI-------QEEPWRREKLLALIARLRAGLEALGF 290 (360)
T ss_pred EEEc---CHH----HHHHHHHhCccceecCCCCHHHHHHHHHHHHHH-------hhCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9864 777 77766544332 1 2234444444555555321 22346678999999999999988763
Q ss_pred CCCccccccCcceeEecCCC----HHHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHH
Q 013839 359 SLNWEHITNQLGMFCFSGLT----PYQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIH 417 (435)
Q Consensus 359 ~~~~~~~~~~~g~~~~~~~~----~~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~ 417 (435)
.+. +.++.++|+.+. ...+.+.|.++||.+.++ | |+++.. .+.+++++++++|+
T Consensus 291 ----~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 291 ----TLM-PSCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred ----ccC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 344 345567777552 333433345689999642 2 999863 37888999888763
No 121
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.96 E-value=8.3e-27 Score=227.92 Aligned_cols=331 Identities=14% Similarity=0.123 Sum_probs=224.3
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcC-C-CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-S-EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
++++.|||+.|.+ .+++.++...+.+..++.. + ....|.+..|.+++++++++++....+. ++.+. ++ +
T Consensus 31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~--~~-s 101 (385)
T TIGR01825 31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALV--FQ-S 101 (385)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEE--EC-c
Confidence 5688999999875 2334555555555555542 2 1345878899999999999998433222 33454 44 5
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC-CCcEEEEeCCC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP-DSSFFLLHPSA 204 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~v~~~~p 204 (435)
|++++.++ +..++.+||.|++++|+|..+...+...|.++..++ .+|++++++.+.+.. +++++++++++
T Consensus 102 G~~a~~~a--~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v 172 (385)
T TIGR01825 102 GFNTNQGV--LSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGV 172 (385)
T ss_pred HHHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecC
Confidence 56776665 566788999999999999998877777887776543 368888888876432 36889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 205 HNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 205 ~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
+||||...+ +++|.++|++||+++|+||+|..+.++.... .....+.-..+.++++.||||.++++| ||+++
T Consensus 173 ~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~ 244 (385)
T TIGR01825 173 FSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGR--GTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAG 244 (385)
T ss_pred CcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCC--ccHhhcCCCcCCcEEEEeccHHhhcCC---CEEec
Confidence 999999876 5689999999999999999997765531101 111111112467899999999998766 99863
Q ss_pred EecChhHHHHHHHHHHHHhh-cccc-CCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 013839 285 LCVDSKQAAAIRSQIQQIAR-AMYG-SPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNW 362 (435)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 362 (435)
+++ +++.+..... .... ..+...+.++.+++.... + ..+..+++.++++++.+.|++++.
T Consensus 245 ---~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~-~~~~~~~~~~~~~~l~~~L~~~g~---- 306 (385)
T TIGR01825 245 ---HKE----LIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQ------R-SPELMERLWDNTRFFKAGLGKLGY---- 306 (385)
T ss_pred ---CHH----HHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh------c-CHHHHHHHHHHHHHHHHHHHHcCC----
Confidence 777 7777765433 2222 234566666666664211 1 123556677788999999988763
Q ss_pred cccccCcceeEec-CC--C-HHHHHHHhhhccEEEeCC-------C----cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 363 EHITNQLGMFCFS-GL--T-PYQVDRLAKEFHIYMTQD-------G----RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 363 ~~~~~~~g~~~~~-~~--~-~~~~~~ll~~~gI~i~pg-------g----Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
.+..+++.++.+. +. + .++...+++ +||.+.++ | |+++. ..+++++++++++|+++++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 307 DTGGSETPITPVVIGDEKAAQEFSRRLFD-EGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHHHHHH-CCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 4555555543332 21 2 234566655 59998531 2 67653 348999999999999988654
No 122
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.96 E-value=1.2e-26 Score=221.39 Aligned_cols=273 Identities=15% Similarity=0.100 Sum_probs=199.8
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEc---CCCChhhHHHHhhCCCCee
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFP---DPTWSNHHNIWRDAQIPER 168 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~---~p~y~~~~~~~~~~g~~~~ 168 (435)
.-+.+|++.+|+++ +.. +++++ +++||.+|+..+ +.++++|||+|+++ .|+|..+...++..|++++
T Consensus 54 ~~~~~Le~~lA~~~-g~~-----~e~il--v~~gg~~a~~~~--~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~ 123 (346)
T TIGR03576 54 IFEEKVQELGREHL-GGP-----EEKIL--VFNRTSSAILAT--ILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYF 123 (346)
T ss_pred HHHHHHHHHHHHHc-CCC-----cceEE--EECCHHHHHHHH--HHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEe
Confidence 34567777777776 332 56777 999999999888 88888999999975 3788888888898898753
Q ss_pred eeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCccc
Q 013839 169 TYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKD 248 (435)
Q Consensus 169 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~ 248 (435)
.+ .++++++. . ++++++++ +++||+|.+++.+++++|+++|++|++++|+||+|..+..+...
T Consensus 124 ~~---------~~l~~l~~-~----~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~-- 186 (346)
T TIGR03576 124 ES---------DELSELKK-I----DGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYG-- 186 (346)
T ss_pred cc---------CCHHHHhh-C----cCceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCC--
Confidence 22 13444322 1 34677666 45799999999999999999999999999999999876532111
Q ss_pred HHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhH
Q 013839 249 AQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 249 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
..+...+ + ..++++|+|| +++|+|+||+++ +++ +++.+.+..+....+++++.|.++.++|+...
T Consensus 187 ~~~~~~~---~-~divv~s~SK--alaG~r~G~v~~---~~~----li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~-- 251 (346)
T TIGR03576 187 QPPALDL---G-ADLVVTSTDK--LMDGPRGGLLAG---RKE----LVDKIKSVGEQFGLEAQAPLLAAVVRALEEFE-- 251 (346)
T ss_pred CCCHHHc---C-CcEEEeccch--hccccceEEEEe---CHH----HHHHHHHhhcCcccCccHHHHHHHHHHHhhcc--
Confidence 1111111 2 2366789999 568999999974 888 88888887765555678888988888886421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC----HHHHHHHhhhccEEEeCC-------C
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT----PYQVDRLAKEFHIYMTQD-------G 397 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~ll~~~gI~i~pg-------g 397 (435)
.+..++.++++++.+.+.+++++ +.+++++ |+|+.+. .+++.++++++||.++|+ |
T Consensus 252 ------~~~~~~~l~~r~~~~~~~l~~~~------~~~~~~~-f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~ 318 (346)
T TIGR03576 252 ------LSRIRDAFKRKEEVYLRLFDKLN------VERTPTG-FVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASK 318 (346)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhCC------CCcCCCe-EEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCC
Confidence 24567788888888887777543 3344555 7888763 367888889999999995 2
Q ss_pred --cEEeccCCCC---cHHHHHHHHHHHH
Q 013839 398 --RISMAGVTTG---NVNYLANAIHEVT 420 (435)
Q Consensus 398 --Ris~~~~~~e---~i~~~~~~l~~~l 420 (435)
||+++. +++ ++++++++|++.+
T Consensus 319 ~vRis~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 319 TLRFDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred eEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence 999975 443 6889999887654
No 123
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.95 E-value=2.7e-26 Score=223.90 Aligned_cols=334 Identities=15% Similarity=0.106 Sum_probs=216.1
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC--CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS--EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
++...|||..|.+.+.-|+ .++.+.+++.+++... ....|+ ..-..+|.+.+++++ +. +++. +++|
T Consensus 25 ~g~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~-g~-------~~~~--~~~s 92 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGH-AHPKLVEALKEQLEKLVHVSNLYY-TEPQEELAEKLVEHS-GA-------DRVF--FCNS 92 (379)
T ss_pred CCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhccccccccC-CHHHHHHHHHHHhhC-CC-------CEEE--EeCC
Confidence 5678999999854232332 2334444444444321 112243 233456666666665 32 2566 8999
Q ss_pred chhHHHHHHHHHH-HhC----CCCEEEEcCCCChhhHHHHhhCCCCeee----eeecCCCCCC--cChHhHHHHhhcCCC
Q 013839 126 GTGACRLFAEFQR-RFH----PESHIYFPDPTWSNHHNIWRDAQIPERT----YHYYDPDSKS--LDFAALMDDIKNAPD 194 (435)
Q Consensus 126 g~~a~~~~~~~~~-~~~----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~--~d~e~l~~~i~~~~~ 194 (435)
|++|+.++..++. ... +||+|++++|+|.++.......+..... .++..+..+. .|++.+++.+. +
T Consensus 93 g~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~ 169 (379)
T TIGR00707 93 GAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID---D 169 (379)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh---h
Confidence 9999998854332 222 3799999999998887666555443321 2221111111 18899999887 5
Q ss_pred CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccc
Q 013839 195 SSFFLLHPSAHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG 273 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g 273 (435)
++++++++.++||+|.. ++.+++++|.++|++|++++|+||+|.++.+.+ ...+.... +...++ .++||.++
T Consensus 170 ~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g---~~~~~~~~-~~~~d~---~t~sK~~~ 242 (379)
T TIGR00707 170 ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG---KFFAYEHY-GIEPDI---ITLAKGLG 242 (379)
T ss_pred CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhhHHhc-CCCCCE---EEEccccc
Confidence 67888887777778864 689999999999999999999999998876643 11222122 222233 36899999
Q ss_pred ccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 274 LYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNL 353 (435)
Q Consensus 274 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 353 (435)
+|+|+||+++ +++ +++.+.........+.+.++|.++.++|+.- + ....+++++++++.+++.|
T Consensus 243 -~G~riG~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~-------~-~~~~~~~~~~~~~~~~~~l 306 (379)
T TIGR00707 243 -GGVPIGATLA---KEE----VAEAFTPGDHGSTFGGNPLACAAALAVLEVI-------E-KERLLENVKEKGDYFKERL 306 (379)
T ss_pred -CCcccEEEEE---cHH----HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-------H-hhhHHHHHHHHHHHHHHHH
Confidence 9999999964 777 8887776444445567889999988887521 1 1235566667777777777
Q ss_pred HhhCCCCCccccccCcceeEecCC--CHHHHHHHhhhccEEEeCCC----cEEecc-CCCCcHHHHHHHHHHHH
Q 013839 354 EKLGSSLNWEHITNQLGMFCFSGL--TPYQVDRLAKEFHIYMTQDG----RISMAG-VTTGNVNYLANAIHEVT 420 (435)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~ll~~~gI~i~pgg----Ris~~~-~~~e~i~~~~~~l~~~l 420 (435)
++++....+.... ..|.++|+.+ +.+.+.+.|+++||.+.|++ ||+++. .+++++++++++|++++
T Consensus 307 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 307 EELGKNYPNKEVR-GKGLMLGIELEAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred HHHHhhCCCCccc-cCceEEEEEecCcHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 6654221122222 3466777655 34445444567999999875 888643 48899999999998753
No 124
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=7.5e-27 Score=200.41 Aligned_cols=275 Identities=17% Similarity=0.137 Sum_probs=213.9
Q ss_pred cccCCCeeeEecCCchhHHHHHHHHHHHhCCC-CEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhh
Q 013839 112 VVKEGRSAGVQALSGTGACRLFAEFQRRFHPE-SHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIK 190 (435)
Q Consensus 112 ~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~ 190 (435)
++.+++++ +-.|+.+.+.++ +...|.|| ++++.-.|+|+.|.-.+...+++++.+|+ +.+|.+++|.+.+.++
T Consensus 83 pLt~dnic--~GvGsDE~ID~i--iR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl--~pdF~lnvdai~evl~ 156 (375)
T KOG0633|consen 83 PLTSDNIC--VGVGSDELIDLI--IRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPL--NPDFSLNVDAIAEVLE 156 (375)
T ss_pred CCCccceE--EecCcHHHHHHH--HhheecCCccceeecCCcceeEEEEeecCCceEEEecC--CCCccccHHHHHHHHh
Confidence 46688999 888888888888 67678899 99999999999997777788999999998 5589999999999988
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccc
Q 013839 191 NAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAK 270 (435)
Q Consensus 191 ~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK 270 (435)
.. ...+.+++++|+||||..+..+++++|.+.-. +.+|++||+|.+|.-.+ +-..+.....+.+++.++||
T Consensus 157 ~d-s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~------S~~~lV~kYpNLivlqTlSK 227 (375)
T KOG0633|consen 157 LD-SKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVE------SRMKLVKKYPNLIVLQTLSK 227 (375)
T ss_pred cc-ccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeecccc------ccchHhHhCCceeehhhhhh
Confidence 65 46899999999999999999999999887655 68999999999988532 22233455688999999999
Q ss_pred cccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 271 SMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLR 350 (435)
Q Consensus 271 ~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 350 (435)
.||++|+|+||... +.. ++..+..... ..+.+.++..++..++++... +.++.+++.+.+.+..+.
T Consensus 228 sfGLAGiRvG~~~~---~~~----ia~iln~~Ka--PYNiS~~~s~~AL~Als~~n~-----kkme~~rdaiv~er~RL~ 293 (375)
T KOG0633|consen 228 SFGLAGIRVGYGAF---PLS----IAEILNRAKA--PYNISVAGSVAALAALSDSNG-----KKMEDVRDAIVRERERLF 293 (375)
T ss_pred hcCcceeEeecccc---cHH----HHHHHHhccC--CccccchhHHHHHHhcCcccc-----hHHHHHHHHHHHHHHHHH
Confidence 99999999999953 777 7777766543 356777778888889986542 677888888888888899
Q ss_pred HHHHhhCCCCCccccccCcceeEecCC-------CHHHHHHHhhhccEEEeCC-------C--cEEeccCCCCcHHHHHH
Q 013839 351 QNLEKLGSSLNWEHITNQLGMFCFSGL-------TPYQVDRLAKEFHIYMTQD-------G--RISMAGVTTGNVNYLAN 414 (435)
Q Consensus 351 ~~l~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~ll~~~gI~i~pg-------g--Ris~~~~~~e~i~~~~~ 414 (435)
..|.++++-. ++..+..+.|+...+ +.....+++.+.||.++=- | ||+.+. +|+-.-+++
T Consensus 294 keLt~v~~~~--~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt--~EentvL~k 369 (375)
T KOG0633|consen 294 KELTEVPFLN--DYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGT--PEENTVLMK 369 (375)
T ss_pred HHhhcCcccc--CCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCC--cccchHHHH
Confidence 8998876411 233444445665533 3345566667789999732 3 999854 555577888
Q ss_pred HHHHH
Q 013839 415 AIHEV 419 (435)
Q Consensus 415 ~l~~~ 419 (435)
-|+++
T Consensus 370 ~~K~~ 374 (375)
T KOG0633|consen 370 CLKQF 374 (375)
T ss_pred HHHhh
Confidence 87765
No 125
>PLN02721 threonine aldolase
Probab=99.95 E-value=1.6e-25 Score=216.27 Aligned_cols=323 Identities=14% Similarity=0.148 Sum_probs=206.6
Q ss_pred CeeeeecceecCCCCCcccchHHHHHHHHhc-CCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 51 YKINLGVGAYRDDKGRPVVLQCVREAEAKIA-GSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 51 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
.+++|+.|.+ +.|.+.+.+++.... ......|.|. ..+|++++++++... ... ++.+|+++
T Consensus 6 ~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~l~~~la~~~~~~--------~~~--~~~~Gs~a 67 (353)
T PLN02721 6 RVVDLRSDTV------TKPTDAMRAAMANAEVDDDVLGYDPT--ALRLEEEMAKIFGKE--------AAL--FVPSGTMG 67 (353)
T ss_pred hhhhhhcccc------cCCCHHHHHHHHhccCCCcccCCCHH--HHHHHHHHHHHhCCc--------eeE--EecCccHH
Confidence 5788999986 234455555555432 2223334333 789999999998322 233 57777877
Q ss_pred HHHHHHHHHHhC-CCCEEEEcCCCChhhHH---HHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC----CCCcEEEEe
Q 013839 130 CRLFAEFQRRFH-PESHIYFPDPTWSNHHN---IWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA----PDSSFFLLH 201 (435)
Q Consensus 130 ~~~~~~~~~~~~-~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~----~~~~~~v~~ 201 (435)
..++ +..++. +||+|++++|+|..... .+...|++++.++. .+++.+|++.+++.+++. .++++++++
T Consensus 68 ~~~~--l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l 143 (353)
T PLN02721 68 NLIS--VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKN--NEDGTMDLDAIEAAIRPKGDDHFPTTRLICL 143 (353)
T ss_pred HHHH--HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCC--CcCCCcCHHHHHHHHHhccCCCCCcceEEEE
Confidence 6555 555566 99999999999854433 56778999998886 345679999999999732 136788888
Q ss_pred CC-CCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCccc
Q 013839 202 PS-AHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVG 280 (435)
Q Consensus 202 ~~-p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG 280 (435)
++ ++||||..++.+++++|.++|++||+++|+|++|..........+... +.... ..++.|+||.++. ++|
T Consensus 144 ~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~---~~~~~--d~~~~s~sK~l~~---~~G 215 (353)
T PLN02721 144 ENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHR---LVKAA--DSVSVCLSKGLGA---PVG 215 (353)
T ss_pred eccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHH---HhhhC--CEEEEecccccCC---cee
Confidence 55 688999999999999999999999999999999743221100011111 11112 2345579999873 357
Q ss_pred EEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 013839 281 CLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSL 360 (435)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 360 (435)
|++. . +++ +++.+.........+++..++.++..+. . ++++.+.. ++..++++.+.+.|++++.
T Consensus 216 ~~~~-~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----l~~~~~~~-~~~~~~~~~l~~~L~~~~~-- 279 (353)
T PLN02721 216 SVIV-G-SKS----FIRKAKRLRKTLGGGMRQVGVLAAAALV---A----LQENVPKL-EDDHKKAKLLAEGLNQIKG-- 279 (353)
T ss_pred eEEe-c-CHH----HHHhHHHHHHhcCCCeehhHHHHHHHHH---H----HHHHHHHH-HHHHHHHHHHHHHHHhCCC--
Confidence 6431 3 777 7666665544322223333332222221 1 11333333 3335567888999988742
Q ss_pred Ccc--ccccCcceeEecCC------CHHHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHHHHHHHHH
Q 013839 361 NWE--HITNQLGMFCFSGL------TPYQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 361 ~~~--~~~~~~g~~~~~~~------~~~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~l~ 421 (435)
+. ...++++ |+|+.+ +.+.+.+.|.++||.+.|++ |++++ ..+++++++++++|++++.
T Consensus 280 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 280 -LRVNVAAVETN-IVYFDITDGSRITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred -cEEecCCccce-EEEEEccCCccccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 32 3344444 566643 34445444457999999986 99985 4488999999999998765
No 126
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=1.3e-25 Score=220.96 Aligned_cols=329 Identities=14% Similarity=0.070 Sum_probs=216.1
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcC-C-----CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEe
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-S-----EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQ 122 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~ 122 (435)
+.+.++|+.++|.. +..++.+++++.+.+.. + ....|+......+|++.+++++. . ++.++
T Consensus 45 ~~~~~~~~sn~yl~---l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-~------~~~i~--- 111 (410)
T PRK13392 45 PRRVTIWCSNDYLG---MGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-K------ESALL--- 111 (410)
T ss_pred CceEEEEECCCccC---CCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-C------CCEEE---
Confidence 45689999988733 34444555555454431 1 01223333346789999999883 2 23444
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC-CCCcEEEEe
Q 013839 123 ALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA-PDSSFFLLH 201 (435)
Q Consensus 123 t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~v~~ 201 (435)
+.+|++|+..+...+..+.+||.|++..+.|..+...++..|+++..++. + |++.+++.+... .+++++|++
T Consensus 112 ~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i 184 (410)
T PRK13392 112 FTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAF 184 (410)
T ss_pred ECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEE
Confidence 56667776666322222348998888777777776777788888766542 1 455666666432 246899999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCe-EEEEecccccccccCCccc
Q 013839 202 PSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHL-IGCAQSYAKSMGLYGHRVG 280 (435)
Q Consensus 202 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~SK~~g~~G~RvG 280 (435)
++|+||||.+.+ +++|.++|++|++++|+||+|....++.. ...+....+..++ .++++|+||.+|++| |
T Consensus 185 ~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~---g~g~~~~~~~~~~~div~~tlsK~~g~~G---G 255 (410)
T PRK13392 185 ESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGAR---GGGIAERDGLMDRIDMIQGTLAKAFGCLG---G 255 (410)
T ss_pred eCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCC---CCchhhhccCCCCCcEEEEEChHhhhccc---c
Confidence 999999999887 66889999999999999999873333211 1111111122223 488899999999888 8
Q ss_pred EEEEEecChhHHHHHHHHHHHHhhcc--ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 013839 281 CLSILCVDSKQAAAIRSQIQQIARAM--YGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGS 358 (435)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 358 (435)
|+++ +++ +++.+++..... ....+.+.+.++.++|+.. +.....+++++++++.+.+.|+++|.
T Consensus 256 ~~~~---~~~----~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g~ 321 (410)
T PRK13392 256 YIAA---SAD----LIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL-------KTSQTERDAHQDRVAALKAKLNANGI 321 (410)
T ss_pred hhhc---CHH----HHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9963 777 777777655431 2334556677777777532 22234567788899999999998873
Q ss_pred CCCccccccCccee-EecCCC--H-HHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHHHHh
Q 013839 359 SLNWEHITNQLGMF-CFSGLT--P-YQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 359 ~~~~~~~~~~~g~~-~~~~~~--~-~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~l~~ 422 (435)
.+.+++++++ ++++.. . ++.+.|++++||.+.+. | ||++.. .+++++++++++|.+++++
T Consensus 322 ----~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 322 ----PVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred ----CCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 4555666654 344542 2 34466666789999853 2 888742 3889999999999998775
Q ss_pred hh
Q 013839 423 EQ 424 (435)
Q Consensus 423 ~~ 424 (435)
+.
T Consensus 398 ~~ 399 (410)
T PRK13392 398 LE 399 (410)
T ss_pred cC
Confidence 43
No 127
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=2.1e-25 Score=218.04 Aligned_cols=323 Identities=16% Similarity=0.086 Sum_probs=212.4
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcC-C-CCCCCCCCcc----cHHHHHHHHHhHcCCCCccccCCCeeeE
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-S-EFLESISASV----STKMVEESVKLVYGKDSDVVKEGRSAGV 121 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~v~~~ 121 (435)
++++.|||+.|.+ .++..++.+++.+.+.+.. + ....|....| ..++++.+++++ +. ++.+
T Consensus 37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-~~------~~~i--- 103 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWF-GA------ERAL--- 103 (385)
T ss_pred CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC------CcEE---
Confidence 6789999999974 2323344444444444431 1 0112332233 456677777766 21 3334
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEe
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLH 201 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~ 201 (435)
++.+|++++..+ +..++++||+|++++|+|+.+...+...|++++.++. .|++.+++.++..++.+.++++
T Consensus 104 ~~~~g~~~~~~~--l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~ 174 (385)
T PRK05958 104 LFSSGYAANLAV--LTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVT 174 (385)
T ss_pred EECcHHHHHHHH--HHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEE
Confidence 466777776655 5566889999999999999999888888988887754 3788999988743234678888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccE
Q 013839 202 PSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGC 281 (435)
Q Consensus 202 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~ 281 (435)
++++||||...+ +++|.++|++||+++|+||+|..+.++...........+ +...+++++.|+||.++.+| ||
T Consensus 175 ~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G---g~ 247 (385)
T PRK05958 175 ESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGL-AGEPDVILVGTLGKALGSSG---AA 247 (385)
T ss_pred EecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCC-CCCCceEEEEechhhcccCC---cE
Confidence 889999997655 679999999999999999998654443111111111112 23467899999999998777 88
Q ss_pred EEEEecChhHHHHHHHHHHHHhhc-c-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 013839 282 LSILCVDSKQAAAIRSQIQQIARA-M-YGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSS 359 (435)
Q Consensus 282 ~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 359 (435)
+++ +++ +.+.+.+.... . ..+.+...+.++..+++... .. +..++++.++++.+.+.|++++.
T Consensus 248 ~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~------~~-~~~~~~~~~~~~~l~~~L~~~~~- 312 (385)
T PRK05958 248 VLG---SET----LIDYLINRARPFIFTTALPPAQAAAARAALRILR------RE-PERRERLAALIARLRAGLRALGF- 312 (385)
T ss_pred EEc---CHH----HHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh------cC-HHHHHHHHHHHHHHHHHHHHcCC-
Confidence 853 777 66666543322 1 22344444444545554221 11 45678889999999999998763
Q ss_pred CCccccccCcceeEecCC----CH-HHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHH
Q 013839 360 LNWEHITNQLGMFCFSGL----TP-YQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEV 419 (435)
Q Consensus 360 ~~~~~~~~~~g~~~~~~~----~~-~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~ 419 (435)
.+.++.++ |+|+.+ +. ++...+ .++||.+.++ | ||+++. .+++++++++++|+++
T Consensus 313 ---~~~~~~~~-~~~~~~~~~~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 313 ---QLMDSQSA-IQPLIVGDNERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred ---CcCCCCCC-EEEEEeCCHHHHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 45555555 445443 22 344555 5689999752 2 999852 3889999999999875
No 128
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=1.4e-25 Score=220.02 Aligned_cols=335 Identities=13% Similarity=0.099 Sum_probs=212.6
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
++...|||..|.+...-|+ ..+.+.+.+.+++... . +....+..++++++++++..... .+++. +++||+
T Consensus 37 dg~~~iD~~~g~~~~~lG~-~~p~v~~a~~~~~~~~-~--~~~~~~~~~~~~~la~~l~~~~~----~~~v~--~~~gg~ 106 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGH-CHPKLVEAIQEQAAKL-I--HTSNLYYIEPQEELAEKLVELSG----MDKVF--FCNSGA 106 (396)
T ss_pred CCCEEEECCccHHhccCCC-CCHHHHHHHHHHHhhc-c--ccccccCCHHHHHHHHHHHhhcC----CCEEE--ECCCcH
Confidence 5678999999875332222 1233333333443321 1 11112235677888887744322 35777 999999
Q ss_pred hHHHHHHHHHHHhC-C----CCEEEEcCCCChhhHHHHhhCCCCee----eeeecCCCCC----CcChHhHHHHhhcCCC
Q 013839 128 GACRLFAEFQRRFH-P----ESHIYFPDPTWSNHHNIWRDAQIPER----TYHYYDPDSK----SLDFAALMDDIKNAPD 194 (435)
Q Consensus 128 ~a~~~~~~~~~~~~-~----gd~Vlv~~p~y~~~~~~~~~~g~~~~----~v~~~~~~~~----~~d~e~l~~~i~~~~~ 194 (435)
+|+.++..+..... + .++|++.+++|.++.......+.... ..+. .+++ ..|++++++.+. +
T Consensus 107 eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~l~~~i~---~ 181 (396)
T PRK02627 107 EANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPL--VEGFIYVPFNDIEALKAAIT---D 181 (396)
T ss_pred HHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCC--CCCceEeCCCCHHHHHHhcC---C
Confidence 99999854332211 1 17899999999877654443332211 1111 1111 128899999886 6
Q ss_pred CcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccc
Q 013839 195 SSFFLLHPSAHNPTG-VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG 273 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g 273 (435)
+++++++++++||+| ..++++.+++|.++|++|++++|+||+|.++.+.+. ..+.... +...+ +.+|||.++
T Consensus 182 ~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~---~~~~~~~-~~~pd---i~t~sK~~~ 254 (396)
T PRK02627 182 KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK---LFAYQHY-GIEPD---IMTLAKGLG 254 (396)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc---eeeehhc-CCCCC---EEEEcchhh
Confidence 789999999999999 688999999999999999999999999998876531 1122111 21122 347999999
Q ss_pred ccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 274 LYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNL 353 (435)
Q Consensus 274 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 353 (435)
+|+|+||+++ +++ +++.+.......+.+.+.+.|.++.++|+... + ....++++++.+.+.+.|
T Consensus 255 -~G~rig~~~~---~~~----~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~------~--~~~~~~~~~~~~~~~~~l 318 (396)
T PRK02627 255 -GGVPIGAVLA---KEK----VADVFTPGDHGSTFGGNPLACAAALAVIEIIE------E--EGLLENAAEVGEYLRAKL 318 (396)
T ss_pred -CCcccEEEEE---cHH----HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh------h--ccHHHHHHHHHHHHHHHH
Confidence 9999999974 777 77777654445566788899999888886432 0 122333444444444444
Q ss_pred HhhCCC-CCccccccCcceeEecCC--CH-HHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHHHHHHHHHh
Q 013839 354 EKLGSS-LNWEHITNQLGMFCFSGL--TP-YQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 354 ~~~~~~-~~~~~~~~~~g~~~~~~~--~~-~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~l~~ 422 (435)
.++... ..+.... ..|.++|+.+ +. +++..++ ++||.+.|++ ||+++ ..+++++++++++|++++++
T Consensus 319 ~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~l~-~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 319 RELLEKYPGIKEVR-GLGLMIGIELDRPAAEIVKKAL-EKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred HHHHHhCCCeeeec-cCcEEEEEEecCcHHHHHHHHH-HCCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 333100 0122222 3467788765 33 3456665 4699999875 88764 34899999999999998864
No 129
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=4.4e-25 Score=216.55 Aligned_cols=286 Identities=15% Similarity=0.102 Sum_probs=199.0
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH----hCCCCEEEEcCCCChh----hHHHHhhCCC
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR----FHPESHIYFPDPTWSN----HHNIWRDAQI 165 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~----~~~gd~Vlv~~p~y~~----~~~~~~~~g~ 165 (435)
+.++|+.+++++.... +++|+ +|.|+++++.++ +.++ +.+||+|++++|.|+. +...++..|+
T Consensus 62 ~~~~r~~la~~~g~~~-----~~~i~--~t~g~t~~l~~~--~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~ 132 (398)
T TIGR03392 62 YELARQQVARFLNAPD-----AENIV--WTRGTTESINLV--AQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGA 132 (398)
T ss_pred HHHHHHHHHHHhCCCC-----CCeEE--EeCChHHHHHHH--HHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCc
Confidence 5679999999984321 45788 899999999988 4444 5799999999999865 3455678899
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
+++.++. +.++.+|++++++++. ++++++++++|+||||..++. ++|+++|+++|+++++|++|...... .
T Consensus 133 ~v~~v~~--~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~~---~~i~~~~~~~~~~~ivD~a~~~~~~~-~ 203 (398)
T TIGR03392 133 KVVKLPI--GADLLPDIRQLPELLT---PRTRILALGQMSNVTGGCPDL---ARAITLAHQYGAVVVVDGAQGVVHGP-P 203 (398)
T ss_pred EEEEEec--CCCCCcCHHHHHHHhc---cCceEEEEECccccccccCCH---HHHHHHHHHcCCEEEEEhhhhcCCCC-C
Confidence 9999987 3346789999999997 678999999999999999864 58999999999999999998543321 1
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh---------------------h
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA---------------------R 304 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~---------------------~ 304 (435)
.+.. .+.++++.|++|.+|++| +||+++ +++ +++.+.... +
T Consensus 204 -----~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (398)
T TIGR03392 204 -----DVQA----LDIDFYAFSGHKLYGPTG--IGVLYG---KTE----LLEAMPPWQGGGKMLSHVSFDGFIPQAVPHR 265 (398)
T ss_pred -----Chhh----cCCCEEEEecccccCCCc--eEEEEE---cHH----HHhhCCCeecCCceEeeccccccccCCChhh
Confidence 1111 134577888899998666 899964 777 555443211 0
Q ss_pred ccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc-cCcceeEec--CCCHHH
Q 013839 305 AMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT-NQLGMFCFS--GLTPYQ 381 (435)
Q Consensus 305 ~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~--~~~~~~ 381 (435)
.-..+++..+..++..++.--. +...++.+++..+.++.+.+.|++++. +.... +..+++.|. +.+.+.
T Consensus 266 ~e~GT~~~~~~~a~~~al~~l~-----~~g~~~i~~~~~~l~~~l~~~l~~l~g---~~~~~~~~~~i~~~~~~~~~~~~ 337 (398)
T TIGR03392 266 FEAGTPNIAGVIGLSAALEWLT-----DIDIAAAEAWSVSLADLAEERLAQLPG---FRSFRCPGSSLLAFDFAGVHHSD 337 (398)
T ss_pred ccCCCCCHHHHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCCCCcEEEEEeCCcCHHH
Confidence 1112344445555555553210 122345667778888888888887632 33332 233333322 455566
Q ss_pred HHHHhhhccEEEeCC--------------C--cEEecc-CCCCcHHHHHHHHHHHHHhh
Q 013839 382 VDRLAKEFHIYMTQD--------------G--RISMAG-VTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 382 ~~~ll~~~gI~i~pg--------------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 423 (435)
+...|+++||.+++| | |+|+.. .+.+|+++++++|+++++.+
T Consensus 338 l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 338 LAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 655567899999753 2 999753 37899999999999987653
No 130
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=2.5e-25 Score=215.73 Aligned_cols=285 Identities=13% Similarity=0.094 Sum_probs=196.9
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeec
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYY 173 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 173 (435)
...+++.+|+++ +.+ .+. +++|+++++..+ +.+++.+||+|++..+.|......++..|++++.++..
T Consensus 53 ~~~~~e~lA~~~-g~~-------~~~--i~~g~~~a~~~~--~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 53 IHDFLEDLAEFL-GMD-------EAR--VTHGAREGKFAV--MHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred HHHHHHHHHHHh-CCC-------ceE--EECChHHHHHHH--HHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 467888888887 432 334 689999999888 77778999999999888655556778899999999874
Q ss_pred CCCCCCcChHhHHHHhhcC----CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 174 DPDSKSLDFAALMDDIKNA----PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 174 ~~~~~~~d~e~l~~~i~~~----~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
.++++.+|+++|++.+.+. .+++++|++++|+||||...+ +++|.++|+++++++|+|++|.....+ . +
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~-~--~- 193 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP-V--S- 193 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC-C--C-
Confidence 3346889999999998631 125789999999999998765 558889999999999999998764321 1 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcccc--------CCChhHHHHHHHH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYG--------SPPVHGILLVATI 321 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~q~~~~~~ 321 (435)
.. . .+..++++|+||+++ +|.|+||+++ +++ +++.++....+... ......+.++..+
T Consensus 194 --~~---~-~~~di~v~s~sK~~~-~~g~~G~l~~---~~~----~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 259 (370)
T TIGR02539 194 --AK---E-IGADFIVGSGHKSMA-ASGPCGVLGM---SEE----WEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMAS 259 (370)
T ss_pred --HH---H-cCCCEEEeeCccccc-CCCCEEEEEE---CHH----HHhhhcccccCCccceeeeecccccccHHHHHHHH
Confidence 11 1 134567799999999 5778999974 788 77777765432111 1111233334344
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc--cccCcceeEecCCC------------HHHHHHHhh
Q 013839 322 LSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEH--ITNQLGMFCFSGLT------------PYQVDRLAK 387 (435)
Q Consensus 322 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~g~~~~~~~~------------~~~~~~ll~ 387 (435)
+... .++++...+.++. ++++++.|+++|+ .. ..+..+.|+++.+. ...+.+.|+
T Consensus 260 l~~~------~~~l~~~~~~~~~-~~~l~~~L~~~g~----~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~ 328 (370)
T TIGR02539 260 FPHV------VERVKRWDEEVKK-TRWFVAELEDIGF----IQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELK 328 (370)
T ss_pred HHHH------HHHHHHHHHHHHH-HHHHHHHHHhCCc----EEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHH
Confidence 4321 2444444444444 4589999998874 32 22344556655331 124555556
Q ss_pred hccEE-EeCCC----cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 388 EFHIY-MTQDG----RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 388 ~~gI~-i~pgg----Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
++||. ++++. |+++...+++++++++++|++++++
T Consensus 329 e~GI~~ir~~~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 329 KRGIHGIRSGQTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred hCCCccccCCcceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 78997 77763 8886445899999999999988764
No 131
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=3.9e-25 Score=217.13 Aligned_cols=286 Identities=18% Similarity=0.150 Sum_probs=201.4
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH----hCCCCEEEEcCCCChh----hHHHHhhCCC
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR----FHPESHIYFPDPTWSN----HHNIWRDAQI 165 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~----~~~gd~Vlv~~p~y~~----~~~~~~~~g~ 165 (435)
..++|+.+++++...+ +++|. +++|+++++.+++ .++ +.+||+|++++|.|+. +...++..|+
T Consensus 65 ~~~~r~~la~~~g~~~-----~~~i~--~~~~~t~~i~~~~--~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 135 (401)
T PRK10874 65 YEAAREQVAQLLNAPD-----AKNIV--WTRGTTESINLVA--QSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGA 135 (401)
T ss_pred HHHHHHHHHHHcCCCC-----CCEEE--EECCHHHHHHHHH--HHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCC
Confidence 5689999999884322 56788 8999999999884 433 5799999999999864 4455678899
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
+++.++. ++++.+|++++++.+. ++++++++++|+||||..++. ++|+++|+++|+++|+|++|....+. .
T Consensus 136 ~v~~v~~--~~~~~~d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~~---~~i~~l~~~~g~~~ivD~a~~~g~~~-~ 206 (401)
T PRK10874 136 KVVKLPL--GADRLPDVDLLPELIT---PRTRILALGQMSNVTGGCPDL---ARAITLAHQAGMVVMVDGAQGAVHFP-A 206 (401)
T ss_pred EEEEEec--CCCCcCCHHHHHHhcC---cCcEEEEEeCCcccccCcCCH---HHHHHHHHHcCCEEEEECCccccccc-C
Confidence 9999987 3456789999999997 678999999999999999865 58999999999999999997532221 1
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh---------------------h
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA---------------------R 304 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~---------------------~ 304 (435)
++. ..+.++++.|++|.+|.+| +||+++ +++ +++.+.... +
T Consensus 207 -----~~~----~~~~d~~~~s~~K~~gp~G--~G~l~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (401)
T PRK10874 207 -----DVQ----ALDIDFYAFSGHKLYGPTG--IGVLYG---KSE----LLEAMSPWQGGGKMLTEVSFDGFTPQSAPWR 268 (401)
T ss_pred -----Cch----hcCCCEEEEecccccCCCc--cEEEEE---chH----HHhcCCCeecCCcceEeeccCccCCCCChhh
Confidence 111 1134678899999998777 588864 777 555443211 1
Q ss_pred ccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc-cCcceeEec--CCCHHH
Q 013839 305 AMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT-NQLGMFCFS--GLTPYQ 381 (435)
Q Consensus 305 ~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~--~~~~~~ 381 (435)
....+++..++.++..++..-. +......+++.++.++++.+.|++++. +.... +..+++.|. +++.+.
T Consensus 269 ~e~Gt~~~~~~~al~~al~~l~-----~~g~~~~~~~~~~l~~~l~~~l~~~~g---~~~~~~~~~~i~~~~~~~~~~~~ 340 (401)
T PRK10874 269 FEAGTPNVAGVIGLSAALEWLA-----DIDINQAESWSRSLATLAEDALAKLPG---FRSFRCQDSSLLAFDFAGVHHSD 340 (401)
T ss_pred ccCCCcCHHHHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCCcEEEEEECCcCHHH
Confidence 1123445556666666663211 122345667777888889998887631 33333 333333322 445566
Q ss_pred HHHHhhhccEEEeCC--------------C--cEEeccC-CCCcHHHHHHHHHHHHHhh
Q 013839 382 VDRLAKEFHIYMTQD--------------G--RISMAGV-TTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 382 ~~~ll~~~gI~i~pg--------------g--Ris~~~~-~~e~i~~~~~~l~~~l~~~ 423 (435)
+.+.|+++||.+.+| | |+|+... +++++++++++|+++++.+
T Consensus 341 ~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 341 LVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 655667799999762 2 9998533 7899999999999987653
No 132
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.94 E-value=5.3e-25 Score=211.42 Aligned_cols=307 Identities=14% Similarity=0.010 Sum_probs=205.0
Q ss_pred cchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEE
Q 013839 69 VLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYF 148 (435)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv 148 (435)
|++.+.+++.+.... ...|.+.....++++.+++++. . ++++ ++.||++++.++ +..++.+||+|++
T Consensus 10 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~~a~~~g-~-------~~~~--~~~~gt~a~~~~--~~~l~~~gd~v~~ 76 (338)
T cd06502 10 PTPEMLEAMAAANVG-DDVYGEDPTTAKLEARAAELFG-K-------EAAL--FVPSGTAANQLA--LAAHTQPGGSVIC 76 (338)
T ss_pred CCHHHHHHHHhcccC-CcccCCCHHHHHHHHHHHHHhC-C-------CeEE--EecCchHHHHHH--HHHhcCCCCeEEE
Confidence 444445444442222 2357777778899999999884 1 2455 688999998877 6667889999999
Q ss_pred cCCCChhhHH---HHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC----CCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 013839 149 PDPTWSNHHN---IWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP----DSSFFLLHPSAHNPTGVDPTEEQWREIS 221 (435)
Q Consensus 149 ~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~----~~~~~v~~~~p~NPtG~~~~~~~l~~i~ 221 (435)
++|+|..+.. .....|++++.++. +. +.+|++++++++.+.. ++++++++++|+|| |.+++.+++++|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~ 152 (338)
T cd06502 77 HETAHIYTDEAGAPEFLSGVKLLPVPG--EN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAIS 152 (338)
T ss_pred ecCcceeeecCCcHHHHcCceEEeecC--CC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHH
Confidence 9999865432 34457999988876 22 5799999999987421 26799999999998 5566999999999
Q ss_pred HHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHH
Q 013839 222 YQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQ 301 (435)
Q Consensus 222 ~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~ 301 (435)
++|++||+++|+|++|..+....... ++..... ...+++.|+||.++++| |+++ ..+++ +++.++.
T Consensus 153 ~~~~~~~~~livDea~~~~~~~~~~~---~~~~~~~--~~d~~~~s~sK~~~~~~---g~~~--~~~~~----~~~~~~~ 218 (338)
T cd06502 153 ALAKENGLPLHLDGARLANAAAALGV---ALKTYKS--GVDSVSFCLSKGGGAPV---GAVV--VGNRD----FIARARR 218 (338)
T ss_pred HHHHHcCCeEeechHHHHHHHHhcCC---CHHHHHh--cCCEEEEeccccCCCcc---ceEE--ECCHH----HHHHHHH
Confidence 99999999999999975432110001 1111111 22356889999999887 5543 22777 7777766
Q ss_pred Hhhc--cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEec-CCC
Q 013839 302 IARA--MYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS-GLT 378 (435)
Q Consensus 302 ~~~~--~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~-~~~ 378 (435)
.... ...+.+.+.+.++...|.... + .+..+++.++++++.+.|+++|. .+.++.++++.+. .-.
T Consensus 219 ~~~~~~~~~~~~~~~~~a~~~~L~~~~-------~-~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~v~~~~~ 286 (338)
T cd06502 219 RRKQAGGGMRQSGFLAAAGLAALENDL-------W-LRRLRHDHEMARRLAEALEELGG----LESEVQTNIVLLDPVEA 286 (338)
T ss_pred HHHHhCCChhhHHHHHHHHHHHhcCch-------H-HHHHHHHHHHHHHHHHHHHhcCC----CcccccCCeEEEecCCc
Confidence 4432 223455667777777776532 1 23446677777889999988874 3445565544322 212
Q ss_pred HHHHHHHhh------hccEEEeCCC----cEEeccC-CCCcHHHHHHHHHH
Q 013839 379 PYQVDRLAK------EFHIYMTQDG----RISMAGV-TTGNVNYLANAIHE 418 (435)
Q Consensus 379 ~~~~~~ll~------~~gI~i~pgg----Ris~~~~-~~e~i~~~~~~l~~ 418 (435)
......+++ ++|+.+.+.+ |+++... ++++++++++++++
T Consensus 287 ~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 287 NAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred cHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 222223322 5799998763 8887533 78889999988864
No 133
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.94 E-value=4.2e-25 Score=217.11 Aligned_cols=326 Identities=15% Similarity=0.142 Sum_probs=214.3
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhc-------CCCCCCCCCCcccHHHHHHHHHhH---cCCCCccccCCCee
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIA-------GSEFLESISASVSTKMVEESVKLV---YGKDSDVVKEGRSA 119 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~Y~~~~g~~~lr~~ia~~l---~~~~~~~~~~~~v~ 119 (435)
++.++|..|+- ..++.+++++.... .+....|....+.+.+++.+.+.+ ++.. ..++.
T Consensus 19 ~~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-----~~~v~ 86 (402)
T cd00378 19 RETLELIASEN-------FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE-----YANVQ 86 (402)
T ss_pred HhCeeeeccCC-------cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC-----ceeee
Confidence 57889988872 22344555544321 111233656667777777544332 3442 22343
Q ss_pred eEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH-----HhhCCCCeeeeeecCC-CCCCcChHhHHHHhhcCC
Q 013839 120 GVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI-----WRDAQIPERTYHYYDP-DSKSLDFAALMDDIKNAP 193 (435)
Q Consensus 120 ~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~-----~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~i~~~~ 193 (435)
+.+|++|+.++ +.++++|||+|++++|+|+.+... ++..|.++..+++..+ +++.+|++++++.+..
T Consensus 87 ---~~sgt~a~~~~--l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~-- 159 (402)
T cd00378 87 ---PHSGSQANLAV--YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE-- 159 (402)
T ss_pred ---cCCcHHHHHHH--HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh--
Confidence 44678998877 777789999999999999876443 5667877766665322 2689999999999853
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccC-CCccCCCCcccHHHHHHhhhcCCeEEEEecccccc
Q 013839 194 DSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAY-QGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 194 ~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 272 (435)
++++++++++|+||+. .++++|.++|++||+++|+|++| .++.+.+. ...++ . . ..++++|+||.+
T Consensus 160 ~~~~~v~~~~~~~~~~-----~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~--~~~~~----~-~-~dv~~~s~sK~l 226 (402)
T cd00378 160 FKPKLIVAGASAYPRP-----IDFKRFREIADEVGAYLLVDMAHVAGLVAGGV--FPNPL----P-G-ADVVTTTTHKTL 226 (402)
T ss_pred CCCCEEEecCcccCCC-----cCHHHHHHHHHhcCCEEEEEccchhhhhhccc--CCCcc----c-C-CcEEEeccccCC
Confidence 4578888888888753 24779999999999999999994 44443321 01111 1 1 237899999987
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCC-hhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPP-VHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQ 351 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 351 (435)
+|+|.||++ +.+++ +++.+.+.......+.+ ...+.++..++.... ....++.+++++++++++.+
T Consensus 227 --~G~~gg~i~--~~~~~----~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~-----~~~~~~~~~~~~~~~~~l~~ 293 (402)
T cd00378 227 --RGPRGGLIL--TRKGE----LAKKINSAVFPGLQGGPHLHVIAAKAVALKEAL-----EPEFKAYAKQVVENAKALAE 293 (402)
T ss_pred --CCCCceEEE--eccHH----HHHHHHHHhCccccCCchHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHH
Confidence 789999996 43437 77777664433323332 233333333332211 12456677889999999999
Q ss_pred HHHhhCCCCCcccc-ccCcceeEecCC-----CHHHHHHHhhhccEEEeCC-------------C-cEEecc-----CCC
Q 013839 352 NLEKLGSSLNWEHI-TNQLGMFCFSGL-----TPYQVDRLAKEFHIYMTQD-------------G-RISMAG-----VTT 406 (435)
Q Consensus 352 ~l~~~~~~~~~~~~-~~~~g~~~~~~~-----~~~~~~~ll~~~gI~i~pg-------------g-Ris~~~-----~~~ 406 (435)
.|+++|. .+. .+.+++++|+.+ +.+.+.++++++||.+.+. + ||++.. .++
T Consensus 294 ~L~~~g~----~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~ 369 (402)
T cd00378 294 ALKERGF----KVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGE 369 (402)
T ss_pred HHHhCCC----eEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCH
Confidence 9988863 343 456788998865 3456666778899999631 1 887643 358
Q ss_pred CcHHHHHHHHHHHHHhhh
Q 013839 407 GNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 407 e~i~~~~~~l~~~l~~~~ 424 (435)
++++++++.|++++++..
T Consensus 370 ~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 370 EEMEEIADFIARALKDAE 387 (402)
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 999999999999887654
No 134
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=9.3e-25 Score=214.15 Aligned_cols=331 Identities=16% Similarity=0.118 Sum_probs=216.9
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcC-C-CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-S-EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
++++.+||..|.+.+.-|+ ..+.+.+.+.+++.. + ....|+...+ .+|.+.+++++ +.. .++++. +++|
T Consensus 41 dg~~~lD~~s~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~-~~~----~~~~v~--~~~s 111 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGH-AHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL-GAP----EGGRVF--FCNS 111 (398)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC-CCC----CCCEEE--EeCc
Confidence 5688999998864222222 233444444444432 1 1234655433 46666676664 221 135777 9999
Q ss_pred chhHHHHHHHHHHHhCCC-CEEEEcCCCChhhHHHHhh-CCCC------------eeeeeecCCCCCCcChHhHHHHhhc
Q 013839 126 GTGACRLFAEFQRRFHPE-SHIYFPDPTWSNHHNIWRD-AQIP------------ERTYHYYDPDSKSLDFAALMDDIKN 191 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~~~~d~e~l~~~i~~ 191 (435)
|++|+..+..+... +| ++|+..+++|.++...... .|.. +..+|. .|++.+++.+.
T Consensus 112 gsea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~- 181 (398)
T PRK03244 112 GAEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVD- 181 (398)
T ss_pred hHHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhc-
Confidence 99999998544333 45 5777778899877543332 2211 112211 37889998885
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccc
Q 013839 192 APDSSFFLLHPSAHNPTGVDPTEEQ-WREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAK 270 (435)
Q Consensus 192 ~~~~~~~v~~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK 270 (435)
++++++++++++||||.+++.++ +++|.++|++||+++|+||+|.+++..+ ....... .+...+ +.+|||
T Consensus 182 --~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g---~~~~~~~-~~~~pD---i~t~sK 252 (398)
T PRK03244 182 --DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG---AWFAHQH-DGVTPD---VVTLAK 252 (398)
T ss_pred --CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc---hHHhhhh-hCCCCC---EEEEch
Confidence 57889999999999999997655 9999999999999999999998876643 1122111 122222 247899
Q ss_pred cccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 271 SMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLR 350 (435)
Q Consensus 271 ~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 350 (435)
.++ +|+|+||+++ +++ +++.+.......+.+.+.+++.++.+.|+.-. .....++++++.+.+.
T Consensus 253 ~l~-~G~~ig~~~~---~~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--------~~~~~~~~~~~~~~l~ 316 (398)
T PRK03244 253 GLG-GGLPIGACLA---FGP----AADLLTPGLHGSTFGGNPVACAAALAVLDTIA--------SEGLLENAERLGEQLR 316 (398)
T ss_pred hhh-CCcccEEEEE---cHH----HHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHH
Confidence 999 8999999975 777 77766654444556788888888888875211 1234566677778888
Q ss_pred HHHHhhCCCCCccccccCcceeEecCCC---HHHHHHHhhhccEEEeCCC----cEEecc-CCCCcHHHHHHHHHHHHHh
Q 013839 351 QNLEKLGSSLNWEHITNQLGMFCFSGLT---PYQVDRLAKEFHIYMTQDG----RISMAG-VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 351 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~ll~~~gI~i~pgg----Ris~~~-~~~e~i~~~~~~l~~~l~~ 422 (435)
+.|++++.+. +... ...|.+.|+.+. ...+.+.+.++||.+.+.+ |+++.. .+++++++++++|++++++
T Consensus 317 ~~L~~~~~~~-~~~v-~g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 317 AGIEALGHPL-VDHV-RGRGLLLGIVLTAPVAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred HHHHhcCCCc-eeeE-eeccEEEEEEEeccHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 8888765321 1122 235678887663 3334334456899998864 888654 5889999999999999876
Q ss_pred hh
Q 013839 423 EQ 424 (435)
Q Consensus 423 ~~ 424 (435)
..
T Consensus 395 ~~ 396 (398)
T PRK03244 395 AA 396 (398)
T ss_pred cc
Confidence 43
No 135
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=9.5e-25 Score=213.38 Aligned_cols=340 Identities=13% Similarity=0.065 Sum_probs=209.4
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..+|+..|.....-|. ..+.+++++.+++... .. ... ....+....+++.+..... .+++. ++++|
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~-~~-~~~-~~~~~~~~~la~~l~~~~~----~~~v~--~~~sG 97 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKL-WH-VSN-LYRIPEQERLAERLVENSF----ADKVF--FTNSG 97 (389)
T ss_pred CCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhc-Cc-ccc-ccCChHHHHHHHHHHhhCC----CCEEE--EcCCc
Confidence 35678999988742121232 2334444455554321 11 111 1112233444444422211 24677 89999
Q ss_pred hhHHHHHHHHHHH--hCCCC----EEEEcCCCChhhHHHHhhCCCCeeeeeecC--CCCCC----cChHhHHHHhhcCCC
Q 013839 127 TGACRLFAEFQRR--FHPES----HIYFPDPTWSNHHNIWRDAQIPERTYHYYD--PDSKS----LDFAALMDDIKNAPD 194 (435)
Q Consensus 127 ~~a~~~~~~~~~~--~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~----~d~e~l~~~i~~~~~ 194 (435)
++|++.+..+... +.+|| +|++.+++|.++.......+.......... .+++. .|++.+++.+. +
T Consensus 98 seA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~ 174 (389)
T PRK01278 98 AEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT---P 174 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC---C
Confidence 9999998643322 35676 899999999988766555443322211000 11111 58899999887 5
Q ss_pred CcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccc
Q 013839 195 SSFFLLHPSAHNPTG-VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG 273 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g 273 (435)
++++|+++.++||+| ..++.+.+++|.++|++||+++|+||+|.++...+. ......+ +.... +.++||.++
T Consensus 175 ~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~~-~~~pd---i~t~sK~l~ 247 (389)
T PRK01278 175 NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK---LFAHEWA-GVTPD---IMAVAKGIG 247 (389)
T ss_pred CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc---ceeeccc-CCCCC---EEEEehhcc
Confidence 788999988899999 788999999999999999999999999998866431 1111111 11111 358999999
Q ss_pred ccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 274 LYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNL 353 (435)
Q Consensus 274 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 353 (435)
+|+|+||+++ +++ +++.+.......+.+.+.+.|.++.+.|+.-. .+.+.+++++..++++++.+.+.
T Consensus 248 -~G~~ig~~~~---~~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~l~~l~--- 315 (389)
T PRK01278 248 -GGFPLGACLA---TEE----AAKGMTPGTHGSTYGGNPLAMAVGNAVLDVIL-APGFLDNVQRMGLYLKQKLEGLV--- 315 (389)
T ss_pred -CCcceEEEEE---cHH----HHhccCCCCCCCCCCccHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHH---
Confidence 8999999974 777 77777665555667788898888877774211 00122333333333333333221
Q ss_pred HhhCCCCCccccccCcceeEecCC--CH-HHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHHHHHHHHHh
Q 013839 354 EKLGSSLNWEHITNQLGMFCFSGL--TP-YQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~~~~~--~~-~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~l~~ 422 (435)
+..+ ..+....+ .|++.++.+ +. ++...+++ +||.+.|++ ||+++ ..+++++++++++|++++++
T Consensus 316 ~~~~--~~~~~v~g-~G~~~~i~~~~~~~~~~~~l~~-~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 316 DRFP--DVIEEVRG-KGLLLGLKCVVPNRDLVQALRD-EGLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred hhCC--CceeeEec-ccEEEEEEEecCHHHHHHHHHH-CCeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 1121 01222333 456666544 33 44566654 699999975 88864 24889999999999998864
No 136
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=1.8e-24 Score=208.71 Aligned_cols=281 Identities=19% Similarity=0.149 Sum_probs=191.0
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
....++++.+++++ +. ++.+ ++.+|++++..+ +.+++.+||+|++++|.|..+...++..|++++.++
T Consensus 46 ~~~~~l~~~la~~~-~~------~~~i---v~~sg~~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~ 113 (349)
T cd06454 46 DLHEELEEELAEFH-GK------EAAL---VFSSGYAANDGV--LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFK 113 (349)
T ss_pred hHHHHHHHHHHHHh-CC------CCEE---EeccHHHHHHHH--HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEec
Confidence 33467888888876 32 2233 467778887766 566778999999999999998888888999887764
Q ss_pred ecCCCCCCcChHhHHHHhhcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 172 YYDPDSKSLDFAALMDDIKNA--PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 172 ~~~~~~~~~d~e~l~~~i~~~--~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
. +|.+++++.+.+. +.+++++++++++||||...+ +++|+++|++||+++|+|++|........ ..
T Consensus 114 ~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~-~~- 181 (349)
T cd06454 114 H-------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPH-GR- 181 (349)
T ss_pred C-------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCC-CC-
Confidence 2 4778888888743 246789999999999998765 67899999999999999999864322211 01
Q ss_pred HHHHHh-hhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc--ccCCChhHHHHHHHHhCChh
Q 013839 250 QAIRIF-LEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM--YGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 250 ~~~~~~-~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~~~ 326 (435)
..... .+..+.+++++|+||.++.+| ||++. +++ +.+.+....... ....+...+.++.+.+....
T Consensus 182 -~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 250 (349)
T cd06454 182 -GVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAG---SKE----LIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQ 250 (349)
T ss_pred -ChhhhccccccCcEEEeechhhhcccC---CEEEC---CHH----HHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHh
Confidence 11111 123356899999999998655 88863 777 666555433221 12355555555555654321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEec-C---CCHHHH-HHHhhhccEEEeCC-----
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS-G---LTPYQV-DRLAKEFHIYMTQD----- 396 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~-~---~~~~~~-~~ll~~~gI~i~pg----- 396 (435)
+ .+..+++++++++.+.+.|.+++. ....+.++++.+. . .+.+.+ +.+ .++||.+.++
T Consensus 251 ------~-~~~~~~~~~~~~~~l~~~l~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~~~~~ 318 (349)
T cd06454 251 ------G-GPERRERLQENVRYLRRGLKELGF----PVGGSPSHIIPPLIGDDPAKAVAFSDAL-LERGIYVQAIRYPTV 318 (349)
T ss_pred ------c-CHHHHHHHHHHHHHHHHHHHhcCC----cccCCCCCcEEEEeCCChHHHHHHHHHH-HhCCceEEEecCCcc
Confidence 2 356678899999999999988763 3444444444333 1 223444 555 4569999752
Q ss_pred ----C--cEEecc-CCCCcHHHHHHHHHHH
Q 013839 397 ----G--RISMAG-VTTGNVNYLANAIHEV 419 (435)
Q Consensus 397 ----g--Ris~~~-~~~e~i~~~~~~l~~~ 419 (435)
+ |++++. .+++++++++++|+++
T Consensus 319 ~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 319 PRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 2 898854 3889999999998764
No 137
>PRK07049 methionine gamma-lyase; Validated
Probab=99.94 E-value=8.3e-24 Score=207.16 Aligned_cols=223 Identities=15% Similarity=0.109 Sum_probs=168.6
Q ss_pred CCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHH----hhC
Q 013839 88 SISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIW----RDA 163 (435)
Q Consensus 88 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~ 163 (435)
|+. .....|++.++++. +. ++++ ++.||++|+.++ +.+++++||+|++++|+|+.+...+ ...
T Consensus 80 ~~~-Pt~~~Le~~lA~le-g~-------~~~i--v~~sG~~Ai~~~--l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~ 146 (427)
T PRK07049 80 FNH-PNSEIVEDRLAVYE-GA-------ESAA--LFSSGMSAIATT--LLAFVRPGDVILHSQPLYGGTETLLAKTFRNF 146 (427)
T ss_pred CCC-cCHHHHHHHHHHHh-CC-------CcEE--EEccHHHHHHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHHhc
Confidence 443 34578999999987 32 1444 689999998877 7888999999999999999997654 467
Q ss_pred CCCeeeeeecCCCCCCcChHhHHHHhhcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh---cCceeeeeccCC
Q 013839 164 QIPERTYHYYDPDSKSLDFAALMDDIKNA--PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKV---KGHFPFFDMAYQ 238 (435)
Q Consensus 164 g~~~~~v~~~~~~~~~~d~e~l~~~i~~~--~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~---~~~~vi~Deay~ 238 (435)
|++++.++. +.|++.+++.+.+. .++++++++++|+||||.+++.+++.+|++.|+. +++++|+|++|.
T Consensus 147 Gi~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~ 220 (427)
T PRK07049 147 GVGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLL 220 (427)
T ss_pred CcEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcc
Confidence 887666642 24677887777532 2468999999999999999999999888888654 689999999986
Q ss_pred CccCCCCcccHHHHHHhhhcCCeEEEEeccccccc-ccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHH
Q 013839 239 GFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG-LYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILL 317 (435)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 317 (435)
...... ++ . ....+++.|+||.++ .+|+|+||+++ +++ +++.+.+.......+.+.+.+++
T Consensus 221 ~~~~~~------pl----~-~g~divv~S~SK~~gG~~glr~G~vv~---~~~----l~~~l~~~~~~~g~~ls~~~a~l 282 (427)
T PRK07049 221 GPVFQK------PL----E-HGADLSVYSLTKYVGGHSDLVAGAVLG---RKA----LIRQVRALRSAIGTQLDPHSCWM 282 (427)
T ss_pred ccccCC------cc----c-cCCCEEEEcCceeecCCCCcEEEEEEC---CHH----HHHHHHHHHHhcCCCCCHHHHHH
Confidence 543211 11 1 134788999999998 69999999963 777 77777776665566788888888
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 318 VATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 318 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+...|+. +....++..++++.+.+.|++++
T Consensus 283 ~~r~L~t----------l~~R~~~~~~~a~~la~~L~~~p 312 (427)
T PRK07049 283 LGRSLET----------LVLRMERANRNARAVAEFLRDHP 312 (427)
T ss_pred HHcCCCh----------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 7777743 33445566888888889998774
No 138
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=1.4e-23 Score=206.37 Aligned_cols=327 Identities=15% Similarity=0.134 Sum_probs=216.1
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC---CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE---FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++...++|+...|.+....|.+.+.+.+++.....+. ...+.......+|.+.+++++ +.. .++ ++
T Consensus 51 ~~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~-g~~-------~~~--~~ 120 (407)
T PRK07179 51 TPGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT-GFE-------SCL--LC 120 (407)
T ss_pred CCCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh-CCC-------cEE--EE
Confidence 35678899999998777655555555555544432111 111222234578888999887 331 344 79
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCC
Q 013839 124 LSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPS 203 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~ 203 (435)
++|++|+.++ +.+++.+||.|++..+.+......++..|++++.++. .|++++++.+++ .++++|++++
T Consensus 121 ~sG~~An~~~--l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~--~~~~lV~v~~ 189 (407)
T PRK07179 121 QSGWAANVGL--LQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIER--HGPGIIVVDS 189 (407)
T ss_pred CCHHHHHHHH--HHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHh--cCCeEEEECC
Confidence 9999999887 6777789999999998888777777778877665432 488999999873 2468899999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcC-CeEEEEecccccccccCCcccEE
Q 013839 204 AHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDE-HLIGCAQSYAKSMGLYGHRVGCL 282 (435)
Q Consensus 204 p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~g~~G~RvG~~ 282 (435)
++||||.+.+ +++|.++|++||+++|+||+|.....+. .....+..+ +.. ..++++.|+||.+| .|+||+
T Consensus 190 v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~--~g~g~~~~~-~~~~~vdi~~~S~sK~~g---~~~G~l 260 (407)
T PRK07179 190 VYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGP--QGAGLVAEL-GLTSRVHFITASLAKAFA---GRAGII 260 (407)
T ss_pred CCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCC--CCCchHHhc-CCCCCCCEEEeechHhhh---ccCeEE
Confidence 9999999988 5589999999999999999986433321 111112222 221 23588999999986 368999
Q ss_pred EEEecChhHHHHHHHHHHHHhhc-cccCC-ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 013839 283 SILCVDSKQAAAIRSQIQQIARA-MYGSP-PVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSL 360 (435)
Q Consensus 283 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~~-~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 360 (435)
++ +++ +++.+...... .+.+. +.....++.++++.. +.....+++++++++++.+.|+++|.
T Consensus 261 ~~---~~~----~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~-------~~~~~~~~~l~~~~~~l~~~L~~~g~-- 324 (407)
T PRK07179 261 TC---PRE----LAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI-------ESADDRRARLHANARFLREGLSELGY-- 324 (407)
T ss_pred Ee---CHH----HHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHcCC--
Confidence 64 777 66666543322 22222 222222232333211 22345678899999999999998863
Q ss_pred CccccccCcceeEecCC----CHHHHHHHhhhccEEE----eCC-----C--cEEecc-CCCCcHHHHHHHHHHHHHhh
Q 013839 361 NWEHITNQLGMFCFSGL----TPYQVDRLAKEFHIYM----TQD-----G--RISMAG-VTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 361 ~~~~~~~~~g~~~~~~~----~~~~~~~ll~~~gI~i----~pg-----g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 423 (435)
.+. ..+ .++++.+ +.+.+.+.|+++||.+ .|+ + ||+++. .+++++++++++|++++++.
T Consensus 325 --~v~-~~~-~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 325 --NIR-SES-QIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred --CCC-CCC-CEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 333 333 3444433 2345555567789973 332 1 999854 48899999999999988754
No 139
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=6.2e-24 Score=207.28 Aligned_cols=214 Identities=13% Similarity=0.119 Sum_probs=162.2
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-----hCCCC
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-----DAQIP 166 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~ 166 (435)
.-..+|.+.++++.... ... +++||++|+.++ +.+++++||+|+++.|.|+.+...+. ..|++
T Consensus 76 Pt~~~LE~~lA~l~g~~--------~~l--~~~sG~~Ai~~a--l~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~ 143 (418)
T PLN02242 76 PTVLNLGRQMAALEGTE--------AAY--CTASGMSAISSV--LLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNIT 143 (418)
T ss_pred hhHHHHHHHHHHHhCCC--------eEE--EEccHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCce
Confidence 34678888888887332 333 799999999888 77788999999999999988876552 46766
Q ss_pred eeeeeecCCCCCCcChHhHHHHhhcCCC-CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 167 ERTYHYYDPDSKSLDFAALMDDIKNAPD-SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 167 ~~~v~~~~~~~~~~d~e~l~~~i~~~~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
++.++. .|+++++++++ + ++++|++++|+||||.+. ++++|+++|++|++++|+|++|..+.+..
T Consensus 144 ~~~~d~-------~d~e~l~~~i~---~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~- 209 (418)
T PLN02242 144 TTFVDI-------TDLEAVKKAVV---PGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP- 209 (418)
T ss_pred EEEcCC-------CCHHHHHHhcC---cCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH-
Confidence 665543 27899999887 4 589999999999999887 56799999999999999999997665431
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccCCcc-cEEEEEecChhHHHHHHHHHHHHhh--ccccCCChhHHHHHHHHh
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRV-GCLSILCVDSKQAAAIRSQIQQIAR--AMYGSPPVHGILLVATIL 322 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~q~~~~~~l 322 (435)
. .+ ..++++.|+||.++.+|+++ ||+++ +++ +++.+++... ....+++...|.+...++
T Consensus 210 ------~-~~----g~divv~S~SK~l~g~g~~~gG~iv~---~~~----li~~l~~~~~~~~~~~g~~~~~~~A~l~~~ 271 (418)
T PLN02242 210 ------A-RL----GADVVVHSISKFISGGADIIAGAVCG---PAE----LVNSMMDLHHGALMLLGPTMNPKVAFELSE 271 (418)
T ss_pred ------H-Hc----CCcEEEEeCccccCCCCCceEEEEEc---CHH----HHHHHHHHhhhhhhccCCCCCHHHHHHHHc
Confidence 1 11 35689999999999899885 78753 777 7776766543 234456666677776666
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 323 SDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 323 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
... .+....+++.++++.+.+.|++++
T Consensus 272 ~l~--------tl~~r~~~~~~~a~~la~~L~~~~ 298 (418)
T PLN02242 272 RLP--------HLSLRMKEHCRRAMEYAKRMKELG 298 (418)
T ss_pred CCC--------cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 532 334466788999999999999875
No 140
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.93 E-value=1e-23 Score=207.27 Aligned_cols=289 Identities=15% Similarity=0.118 Sum_probs=200.1
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHH--HhCCCCEEEEcCCCChhh----HHHHhhCCCC
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQR--RFHPESHIYFPDPTWSNH----HNIWRDAQIP 166 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~--~~~~gd~Vlv~~p~y~~~----~~~~~~~g~~ 166 (435)
+..++|+.+++++. ... ++++. ++.|+++++.+++..+. .+.+||+|+++++.|+.. ....+..|++
T Consensus 63 ~~~~~r~~ia~~~~-~~~----~~~v~--~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 135 (403)
T TIGR01979 63 AYEAVREKVAKFIN-AAS----DEEIV--FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGAT 135 (403)
T ss_pred HHHHHHHHHHHHhC-cCC----CCeEE--EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcE
Confidence 46689999999883 321 35777 89999999888742221 357899999999987653 3455678999
Q ss_pred eeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCc
Q 013839 167 ERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLD 246 (435)
Q Consensus 167 ~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~ 246 (435)
++.++. ++++.+|++++++.+. ++++++++++++||||..++ +++|.++|++||+++|+|++|...... .
T Consensus 136 ~~~v~~--~~~~~~~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~-~- 205 (403)
T TIGR01979 136 LKFIPL--DDDGTLDLDDLEKLLT---EKTKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHMP-V- 205 (403)
T ss_pred EEEEec--CCCCCCCHHHHHHHhc---cCCeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCccc-c-
Confidence 999987 2456799999999997 67899999999999999987 558999999999999999997533211 1
Q ss_pred ccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh---------------------hc
Q 013839 247 KDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA---------------------RA 305 (435)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~---------------------~~ 305 (435)
.+ ...+.++++.|++|.+|++| +|++.+ +++ +++.+.... +.
T Consensus 206 ----~~----~~~~~d~~~~s~~K~~gp~G--~g~l~~---~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 268 (403)
T TIGR01979 206 ----DV----QALDCDFYVFSGHKMYGPTG--IGVLYG---KEE----LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKF 268 (403)
T ss_pred ----Cc----cccCCCEEEEecccccCCCC--ceEEEE---chH----HHhcCCCeecCCCceeecccCccccCCChhhc
Confidence 11 11245688999999998666 788864 666 554432110 00
Q ss_pred cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC-----cceeEec--CCC
Q 013839 306 MYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ-----LGMFCFS--GLT 378 (435)
Q Consensus 306 ~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~g~~~~~--~~~ 378 (435)
...+++.....++..+++... ....+..+++..+.++.+.+.|+.++. +.+..+. ++++.+. +.+
T Consensus 269 ~~gt~~~~~~~al~~al~~~~-----~~g~~~~~~~~~~l~~~l~~~l~~~~g---~~~~~~~~~~~~~~~v~~~~~~~~ 340 (403)
T TIGR01979 269 EAGTPNIAGVIGLGAAIDYLE-----AIGLENIEAHEHELTAYALERLGEIPG---LRIYGPRDAEDRGGIISFNVEGVH 340 (403)
T ss_pred CCCCccHHHHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCccccCceEEEEeCCcC
Confidence 112344444455555553211 012456778888888899998887642 4444332 4554443 455
Q ss_pred HHHHHHHhhhccEEEeCC--------------C--cEEeccC-CCCcHHHHHHHHHHHHHhh
Q 013839 379 PYQVDRLAKEFHIYMTQD--------------G--RISMAGV-TTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 379 ~~~~~~ll~~~gI~i~pg--------------g--Ris~~~~-~~e~i~~~~~~l~~~l~~~ 423 (435)
...+.+.|+++||.+.+| + |||++.. +++|+++++++|+++++.+
T Consensus 341 ~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 341 PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 556666678899999753 2 9998632 7789999999999887654
No 141
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.93 E-value=1.2e-23 Score=206.80 Aligned_cols=286 Identities=15% Similarity=0.141 Sum_probs=200.0
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHH--HHhCCCCEEEEcCCCChh----hHHHHhhCCCCe
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQ--RRFHPESHIYFPDPTWSN----HHNIWRDAQIPE 167 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~--~~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~ 167 (435)
..++|+++++++.... +++|. +|.|+++++.+++..+ ..+.+||+|+++++.|++ +...++..|+++
T Consensus 69 ~~~~r~~la~~~~~~~-----~~~v~--~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 141 (406)
T PRK09295 69 MENVRKQAALFINARS-----AEELV--FVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAEL 141 (406)
T ss_pred HHHHHHHHHHHcCcCC-----CCeEE--EeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 5688999999884322 46788 8999999998884222 246799999999987754 344556789999
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. +.++.+|+++|++++. ++++++++++|+||||..++. ++|.++|+++|+++++|++|...... .
T Consensus 142 ~~v~~--~~~~~~d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~~~---~~i~~~~~~~~~~vivD~a~~~g~~~-~-- 210 (406)
T PRK09295 142 RVIPL--NPDGTLQLETLPALFD---ERTRLLAITHVSNVLGTENPL---AEMIALAHQHGAKVLVDGAQAVMHHP-V-- 210 (406)
T ss_pred EEEec--CCCCCCCHHHHHHhcC---CCcEEEEEecchhcccccCCH---HHHHHHHHHcCCEEEEEcccccCccc-c--
Confidence 99987 3456789999999987 678999999999999999874 58899999999999999997543221 1
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHH----------------------hhc
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI----------------------ARA 305 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~----------------------~~~ 305 (435)
++ ...+.++++.|++|.+|.+| +||+++ +++ +++.+... .+.
T Consensus 211 ---~~----~~~~~D~~~~s~~K~~gp~G--~G~l~~---~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~ 274 (406)
T PRK09295 211 ---DV----QALDCDFYVFSGHKLYGPTG--IGILYV---KEA----LLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRF 274 (406)
T ss_pred ---Cc----hhcCCCEEEeehhhccCCCC--cEEEEE---chH----hHhhCCCcccCCceeeeeecCCccccCCchhhc
Confidence 11 11234688899999988666 799874 666 44433211 011
Q ss_pred cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc--CcceeEec--CCCHHH
Q 013839 306 MYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN--QLGMFCFS--GLTPYQ 381 (435)
Q Consensus 306 ~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~g~~~~~--~~~~~~ 381 (435)
...+++..+..++..+++.-. +...+..+++.++.++++.+.|++++. +....+ ..+++.|. +.+.+.
T Consensus 275 e~GT~~~~~~~~l~~al~~~~-----~~g~~~i~~~~~~l~~~l~~~l~~~~~---~~~~~~~~~~~iv~~~~~~~~~~~ 346 (406)
T PRK09295 275 EAGTPNTGGIIGLGAALDYVS-----ALGLNNIAEYEQNLMHYALSQLESVPD---LTLYGPQNRLGVIAFNLGKHHAYD 346 (406)
T ss_pred CCCCccHHHHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCCceEEEEEECCcCHHH
Confidence 223455556666666664221 123566777888888899999887642 334333 24544443 455566
Q ss_pred HHHHhhhccEEEeCC--------------C--cEEeccC-CCCcHHHHHHHHHHHHH
Q 013839 382 VDRLAKEFHIYMTQD--------------G--RISMAGV-TTGNVNYLANAIHEVTR 421 (435)
Q Consensus 382 ~~~ll~~~gI~i~pg--------------g--Ris~~~~-~~e~i~~~~~~l~~~l~ 421 (435)
+...|+++||.++.| | |+|+... +++|+++++++|+++..
T Consensus 347 ~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 347 VGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 655678899999754 2 9997543 77999999999988643
No 142
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=5.3e-24 Score=207.69 Aligned_cols=288 Identities=14% Similarity=0.093 Sum_probs=199.4
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHh----CCCCEEEEcCCCChhh---HHHHhhCCCC
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRF----HPESHIYFPDPTWSNH---HNIWRDAQIP 166 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~----~~gd~Vlv~~p~y~~~---~~~~~~~g~~ 166 (435)
..++|+.+++++... +++|. +++|+++++..+ +.+++ .+||+|++..+.|+.+ ...++..|++
T Consensus 45 ~~~~r~~la~~~g~~------~~~i~--~~~g~t~a~~~~--~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~ 114 (381)
T PRK02948 45 LQVCRKTFAEMIGGE------EQGIY--FTSGGTESNYLA--IQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYT 114 (381)
T ss_pred HHHHHHHHHHHhCCC------CCeEE--EeCcHHHHHHHH--HHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCE
Confidence 457788888887322 56787 899999998877 44333 5789999988655544 4456678999
Q ss_pred eeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCc
Q 013839 167 ERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLD 246 (435)
Q Consensus 167 ~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~ 246 (435)
++.+++ ++++.+|+++|++.+. ++++++++++|+||||.+++. ++|.++|+++|+++++|++ +.++..+.
T Consensus 115 v~~v~~--~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~~---~~I~~l~~~~~~~vivD~~-~~~g~~~~- 184 (381)
T PRK02948 115 VTEIPV--DKSGLIRLVDLERAIT---PDTVLASIQHANSEIGTIQPI---AEIGALLKKYNVLFHSDCV-QTFGKLPI- 184 (381)
T ss_pred EEEEee--CCCCCCCHHHHHHhcC---CCCEEEEEECCcCCcEeehhH---HHHHHHHHHcCCEEEEECh-hhcccccc-
Confidence 999987 3456799999999987 578899999999999999875 5899999999999999965 45543221
Q ss_pred ccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHH-HHHHHH----HhhccccCCChhHHHHHHHH
Q 013839 247 KDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAI-RSQIQQ----IARAMYGSPPVHGILLVATI 321 (435)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~-~~~l~~----~~~~~~~~~~~~~q~~~~~~ 321 (435)
.+ ...+.++++.|++|.+|.+| +|++++ +++ + ...+.. .......+++.+++.++..+
T Consensus 185 ----~~----~~~~~d~~~~s~~K~~gp~G--~G~l~~---~~~----~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~a 247 (381)
T PRK02948 185 ----DV----FEMGIDSLSVSAHKIYGPKG--VGAVYI---NPQ----VRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTA 247 (381)
T ss_pred ----Cc----ccCCCCEEEecHHhcCCCCc--EEEEEE---cCC----CCCCCcccCCCCCCCcCCCCccHHHHHHHHHH
Confidence 11 12245788899999999888 688864 444 2 111110 00113456777888888778
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc-cC---cce--eEecCCCHHHHHHHhhhccEEEeC
Q 013839 322 LSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT-NQ---LGM--FCFSGLTPYQVDRLAKEFHIYMTQ 395 (435)
Q Consensus 322 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~---~g~--~~~~~~~~~~~~~ll~~~gI~i~p 395 (435)
+... .+..++.+++++++++++.+.|++++.. +.... +. ..+ |...+++.+.+...|+++||.+++
T Consensus 248 l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~~--v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~ 319 (381)
T PRK02948 248 AENI------LKNMQEESLRFKELRSYFLEQIQTLPLP--IEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAIST 319 (381)
T ss_pred HHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCC--EEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEc
Confidence 7542 1456777899999999999999988642 11111 10 111 111244555554445778999973
Q ss_pred C-------------------------C--cEEeccC-CCCcHHHHHHHHHHHHHhhhhh
Q 013839 396 D-------------------------G--RISMAGV-TTGNVNYLANAIHEVTRSEQET 426 (435)
Q Consensus 396 g-------------------------g--Ris~~~~-~~e~i~~~~~~l~~~l~~~~~~ 426 (435)
| + |+|++.. +++|++++++.|+++++++...
T Consensus 320 g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~~ 378 (381)
T PRK02948 320 GSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYRG 378 (381)
T ss_pred hHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 1 2 9998633 7899999999999998776643
No 143
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=4e-23 Score=200.64 Aligned_cols=317 Identities=17% Similarity=0.108 Sum_probs=208.9
Q ss_pred CCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCC
Q 013839 65 GRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPES 144 (435)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd 144 (435)
|+..+.+.+++++..-.......|. .-..++|+.+++.+..... .+.+. ++.+|+.++..+ +.+++.+||
T Consensus 12 gP~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~~~~----~~~i~--~~~~gt~~l~~~--~~~l~~~~~ 81 (368)
T PRK13479 12 GPLTTSRTVREAMLRDWGSWDDDFN--ALTASVRAKLVAIATGEEG----YTCVP--LQGSGTFSVEAA--IGSLVPRDG 81 (368)
T ss_pred CCCCCCHHHHHHhCCCCCCCChHHH--HHHHHHHHHHHHHhCCCCC----ceEEE--EcCCcHHHHHHH--HHhccCCCC
Confidence 3345555655544332211111122 3467888889998743211 12355 789999999998 777778999
Q ss_pred EEEEcCCCChhh--HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 013839 145 HIYFPDPTWSNH--HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISY 222 (435)
Q Consensus 145 ~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~ 222 (435)
+|++++++|.+. ...++..|++++.++. .+++.+|++++++.+++. ++++++++++|+||||...+. ++|.+
T Consensus 82 ~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~~---~~i~~ 155 (368)
T PRK13479 82 KVLVPDNGAYGARIAQIAEYLGIAHVVLDT--GEDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILNPL---DEIAA 155 (368)
T ss_pred eEEEEeCCchHHHHHHHHHHcCCcEEEEEC--CCCCCCCHHHHHHHHHhC-CCCcEEEEEcccCccccccCH---HHHHH
Confidence 999998887665 3677889999999987 344679999999998743 356788899999999999875 58889
Q ss_pred HHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc-cccCCcccEEEEEecChhHHHHHHHHHHH
Q 013839 223 QFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM-GLYGHRVGCLSILCVDSKQAAAIRSQIQQ 301 (435)
Q Consensus 223 ~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~G~RvG~~~~~~~~~~~~~~~~~~l~~ 301 (435)
+|+++++++|+|++ +.++..+ .++. . .+..+++.|++|.+ |++| +||+++ +++ +++.+..
T Consensus 156 l~~~~~~~livDa~-~~~g~~~-----~~~~---~-~~~d~~v~s~~K~l~g~~G--~G~l~~---~~~----~~~~~~~ 216 (368)
T PRK13479 156 VAKRHGKRLIVDAM-SSFGAIP-----IDIA---E-LGIDALISSANKCIEGVPG--FGFVIA---RRS----ELEACKG 216 (368)
T ss_pred HHHHcCCEEEEEcc-cccCCcc-----cccc---c-cCceEEEecCccccccCCC--ceEEEE---CHH----HHHHhhc
Confidence 99999999999955 5554221 1111 1 12346778999965 6677 599974 777 5554443
Q ss_pred Hhh-----------------ccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc
Q 013839 302 IAR-----------------AMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEH 364 (435)
Q Consensus 302 ~~~-----------------~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 364 (435)
... ...++++...+.++..++..-. + ...+++..++++++++.+++.|+++|. ..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~--~--~~~~~~~~~~~~~~~~~l~~~L~~~g~----~~ 288 (368)
T PRK13479 217 NSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELE--E--EGGVPARGARYANNQRTLVAGMRALGF----EP 288 (368)
T ss_pred CCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHH--H--hhCHHHHHHHHHHHHHHHHHHHHHcCC----cc
Confidence 211 1112455555555555554211 0 023566778899999999999998874 22
Q ss_pred ccc-----CcceeEec-C---CCHHHHHHHhhhccEEEeCCC-------cEEe-ccCCCCcHHHHHHHHHHHHHhhh
Q 013839 365 ITN-----QLGMFCFS-G---LTPYQVDRLAKEFHIYMTQDG-------RISM-AGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 365 ~~~-----~~g~~~~~-~---~~~~~~~~ll~~~gI~i~pgg-------Ris~-~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
..+ .+...++. . .+.+.+.+.|.++||.+.+|. |++. +..+.+++++++++|+++++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 289 LLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred cCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 211 11223332 1 344555444567899998862 9984 54588999999999999987653
No 144
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=2.8e-23 Score=200.87 Aligned_cols=312 Identities=16% Similarity=0.135 Sum_probs=207.9
Q ss_pred CCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCC
Q 013839 64 KGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPE 143 (435)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g 143 (435)
+|+..+++.+++++..........|. .-...+|+.+++++.... . ...+. ++.||++++..+ +..++.+|
T Consensus 5 p~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~la~~~~~~~-~---~~~i~--~~~~gt~~l~~~--~~~~~~~~ 74 (355)
T TIGR03301 5 PGPLSTSATVRDAMLVDWCHWDSEFN--DVTDQVRDRLLALAGGDD-N---HTCVL--LQGSGTFAVEAT--IGSLVPRD 74 (355)
T ss_pred CCCCCCCHHHHHHhhhhccCCCHHHH--HHHHHHHHHHHHHhcCCC-C---CcEEE--EeCCcHHHHHHH--HHhccCCC
Confidence 34455667777666552221112243 335688999999873321 1 12344 789999999888 77777888
Q ss_pred CEEEEcCCC-Chh-hHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 013839 144 SHIYFPDPT-WSN-HHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREIS 221 (435)
Q Consensus 144 d~Vlv~~p~-y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~ 221 (435)
|+|++.++. |+. +...++..|.+++.++. ++++.+|++++++.+.++ ++.+++++++++||||...+ +++|+
T Consensus 75 ~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~---~~~i~ 148 (355)
T TIGR03301 75 GKLLVLINGAYGERLAKICEYLGIPHTDLNF--SEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILNP---LEAIA 148 (355)
T ss_pred CeEEEECCCchhhHHHHHHHHcCCceEEEec--CCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchhH---HHHHH
Confidence 887766654 443 45667889999999987 345689999999998754 35678888899999999875 57999
Q ss_pred HHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc-cccCCcccEEEEEecChhHHHHHHHHHH
Q 013839 222 YQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM-GLYGHRVGCLSILCVDSKQAAAIRSQIQ 300 (435)
Q Consensus 222 ~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~G~RvG~~~~~~~~~~~~~~~~~~l~ 300 (435)
++|++|++++|+|+++. +...+ .++. ..+..++++|++|.+ |++| +||+++ +++ +++.+.
T Consensus 149 ~l~~~~~~~livD~~~s-~g~~~-----~~~~----~~~~d~~~~s~~K~l~~~~G--~g~~~~---~~~----~~~~~~ 209 (355)
T TIGR03301 149 KVARSHGAVLIVDAMSS-FGAIP-----IDIE----ELDVDALIASANKCLEGVPG--FGFVIA---RRD----LLEASA 209 (355)
T ss_pred HHHHHcCCEEEEEeccc-cCCcc-----cchh----hcCccEEEecCCcccccCCc--eeEEEE---CHH----HHHHhh
Confidence 99999999999998643 32111 1221 124568899999986 5556 699975 777 555444
Q ss_pred HHh-----------------hccccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 013839 301 QIA-----------------RAMYGSPPVHGILLVATILSDPNLKSLWID-EVKIMADRIQRKRTTLRQNLEKLGSSLNW 362 (435)
Q Consensus 301 ~~~-----------------~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 362 (435)
... .....+++...+.++..++..-. ++ +.++.+++++++++++.+.|+++|.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-----~~g~~~~~~~~~~~~~~~~~~~L~~~g~---- 280 (355)
T TIGR03301 210 GNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELE-----AEGGVPARIARYRRNRELLVDGLRALGF---- 280 (355)
T ss_pred CCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHH-----HcccHHHHHHHHHHHHHHHHHHHHHcCC----
Confidence 110 11223566666666666664221 12 2567778889999999999988763
Q ss_pred ccccc---CcceeEecCC------CHHHHHHHhhhccEEEeCCC-------cEEe-ccCCCCcHHHHHHHHHHH
Q 013839 363 EHITN---QLGMFCFSGL------TPYQVDRLAKEFHIYMTQDG-------RISM-AGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 363 ~~~~~---~~g~~~~~~~------~~~~~~~ll~~~gI~i~pgg-------Ris~-~~~~~e~i~~~~~~l~~~ 419 (435)
....+ .+++++|+.+ +.+.+.+.++++||.+.+++ ||++ ...+.++++++++.|+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 281 QPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred eeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 22222 3454555533 33455555577899999873 9986 444789999999999875
No 145
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.93 E-value=2.4e-23 Score=204.22 Aligned_cols=330 Identities=13% Similarity=0.090 Sum_probs=209.4
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCC-CCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEF-LESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.++...|||..|.-...-|. ..+.+++++.+++..... .......-..++.+.+++.. + .+.+. ++++
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~--~~~s 105 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT-F-------AERVF--FANS 105 (403)
T ss_pred CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC-C-------CCEEE--EeCc
Confidence 35678999987721111222 333444444444432111 11101111224555555443 1 13566 8999
Q ss_pred chhHHHHHHHHHHHhC-----C-CCEEEEcCCCChhhHHHH-hhCC------------CCeeeeeecCCCCCCcChHhHH
Q 013839 126 GTGACRLFAEFQRRFH-----P-ESHIYFPDPTWSNHHNIW-RDAQ------------IPERTYHYYDPDSKSLDFAALM 186 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~~-~~~g------------~~~~~v~~~~~~~~~~d~e~l~ 186 (435)
|++|+..+..+..... + .++|+..+-+|.+..... ...| .+++.++. .|++.++
T Consensus 106 GseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 178 (403)
T PRK05093 106 GAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVK 178 (403)
T ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHH
Confidence 9999999865443331 2 367888888887654322 1111 11122211 2789999
Q ss_pred HHhhcCCCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEE
Q 013839 187 DDIKNAPDSSFFLLHPSAHNPTGVDP--TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGC 264 (435)
Q Consensus 187 ~~i~~~~~~~~~v~~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 264 (435)
+.+. +++++|+++ |.||+|-++ +.+.+++|.++|++||+++|+||+|.++.+.+. ..+...+ +....
T Consensus 179 ~~l~---~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~~-~~~pd--- 247 (403)
T PRK05093 179 AVID---DHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD---LFAYMHY-GVTPD--- 247 (403)
T ss_pred HHhc---CCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc---chhhhhc-CCCCC---
Confidence 8886 567788776 788887665 889999999999999999999999998877641 2222112 11111
Q ss_pred EecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 013839 265 AQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQR 344 (435)
Q Consensus 265 ~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~ 344 (435)
+.||||.++ +|+|+||+++ +++ +++.+.......+.+.+++.|.++.++|+.. . ....++++++
T Consensus 248 i~s~sK~l~-~G~rig~vv~---~~~----i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~-------~-~~~~~~~~~~ 311 (403)
T PRK05093 248 ILTSAKALG-GGFPIGAMLT---TAE----IASHFKVGTHGSTYGGNPLACAVAEAVFDII-------N-TPEVLEGVKA 311 (403)
T ss_pred EEEeccccc-CCcceEEEEE---cHH----HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH-------h-hccHHHHHHH
Confidence 568999999 9999999975 777 7777765444455678888898888876421 1 1244577888
Q ss_pred HHHHHHHHHHhhCCCCCccccccCcceeEecCC-------CHHHHHHHhhhccEEEeCCC----cEEeccC-CCCcHHHH
Q 013839 345 KRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL-------TPYQVDRLAKEFHIYMTQDG----RISMAGV-TTGNVNYL 412 (435)
Q Consensus 345 ~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~ll~~~gI~i~pgg----Ris~~~~-~~e~i~~~ 412 (435)
+++.+.+.|++++....+....+..|++.|+.+ +.+++..++ ++||.+.++| ||+++.. ++++++++
T Consensus 312 ~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~-~~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~ 390 (403)
T PRK05093 312 RRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAA-EEGVMVLVAGPDVLRFAPSLVIEEADIDEG 390 (403)
T ss_pred HHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHH-HCCeEEecCCCCEEEEeCCCCCCHHHHHHH
Confidence 889999999876421112223345678888754 123456665 5799999865 8865443 88999999
Q ss_pred HHHHHHHHHh
Q 013839 413 ANAIHEVTRS 422 (435)
Q Consensus 413 ~~~l~~~l~~ 422 (435)
+++|++++.+
T Consensus 391 ~~~l~~~l~~ 400 (403)
T PRK05093 391 LARFEKAVAK 400 (403)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 146
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.92 E-value=5.1e-23 Score=203.24 Aligned_cols=339 Identities=16% Similarity=0.074 Sum_probs=219.2
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++...+|+..|.....-| ..++++++++.+++.... ..+.+..+..+|+++|++++... +++. +++||
T Consensus 45 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~-~~~~~~~~~~~lae~l~~~~~~~-------~~v~--~~~sG 113 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILG-HAHPRVVEAVKEALERGT-SYGAPTEAEILLAKEIISRVPSV-------EMVR--FVNSG 113 (423)
T ss_pred CCCCEEEEccccccccccC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCcc-------cEEE--EeCCH
Confidence 4678899999887412112 334455555566665432 22335667899999999987332 3677 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh---CCCCeeeeeecC-------CCCC---CcChHhHHHHhhcCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD---AQIPERTYHYYD-------PDSK---SLDFAALMDDIKNAP 193 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~-------~~~~---~~d~e~l~~~i~~~~ 193 (435)
++|++.+..+.......++|+...++|.++...+.. .+......+..+ .... ..|++++++.+.+.+
T Consensus 114 seA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~ 193 (423)
T TIGR00713 114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYG 193 (423)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcC
Confidence 999999865544445569999999999987543332 111111111100 0000 127899999887544
Q ss_pred CCcEEEEe-CCCCCCCCCCCC-HHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccc
Q 013839 194 DSSFFLLH-PSAHNPTGVDPT-EEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKS 271 (435)
Q Consensus 194 ~~~~~v~~-~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 271 (435)
++++++++ +.++| +|.+.+ ++.+++|.++|++||+++|+||+|.++.++.. .....+ +...+ +.+|||.
T Consensus 194 ~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~----~~~~~~-~~~pD---i~t~sK~ 264 (423)
T TIGR00713 194 EEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALG----GAQEYF-GVEPD---LTTLGKI 264 (423)
T ss_pred CcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcc----hhHHHh-CCCcc---hhhhhhh
Confidence 45666666 58888 788887 68899999999999999999999988865321 111112 22122 3379999
Q ss_pred ccccCCcccEEEEEecChhHHHHHHHHHHHH---hhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRSQIQQI---ARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTT 348 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 348 (435)
++ +|+|+||+++ +++ +++.+... ....+.+.+.+++.++.+.|+... + .+..+..++..+..++.
T Consensus 265 l~-~G~pig~v~~---~~~----i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~--~--~~~~~~~~~~~~~~~~~ 332 (423)
T TIGR00713 265 IG-GGLPVGAFGG---RRE----IMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLD--E--EGVYTELDELAKRLAEG 332 (423)
T ss_pred hc-CCCceeeeeE---HHH----HHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHh--c--ccHHHHHHHHHHHHHHH
Confidence 99 9999999974 777 77776531 223456788888888877775321 0 02345556666667777
Q ss_pred HHHHHHhhCCCCCccccccCcceeEe-cCC------------CH----HHHHHHhhhccEEEeCCC----cEEeccCCCC
Q 013839 349 LRQNLEKLGSSLNWEHITNQLGMFCF-SGL------------TP----YQVDRLAKEFHIYMTQDG----RISMAGVTTG 407 (435)
Q Consensus 349 l~~~l~~~~~~~~~~~~~~~~g~~~~-~~~------------~~----~~~~~ll~~~gI~i~pgg----Ris~~~~~~e 407 (435)
+.+.+++++.+ . .....++++.+ +.. +. .+...++ ++||.+.+++ |+++. .+++
T Consensus 333 l~~~~~~~~~~--~-~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~l~~~-~t~~ 407 (423)
T TIGR00713 333 LSEVLEDTGIP--H-TVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQFEACFLSAA-HTEE 407 (423)
T ss_pred HHHHHHhcCCC--e-EEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCCccceeeECC-CCHH
Confidence 77777776642 1 12334554442 321 11 1334554 5899998754 88876 4899
Q ss_pred cHHHHHHHHHHHHHh
Q 013839 408 NVNYLANAIHEVTRS 422 (435)
Q Consensus 408 ~i~~~~~~l~~~l~~ 422 (435)
++++++++|.+++++
T Consensus 408 ~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 408 DIENTIEAAEEVFAE 422 (423)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998864
No 147
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.92 E-value=1.7e-23 Score=206.52 Aligned_cols=338 Identities=13% Similarity=0.066 Sum_probs=210.3
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCccc----HHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVS----TKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
++.+.|||..|.....-|. .++.+++++.+++... ..|....+. .++.+.+++++ +. ..+++. ++
T Consensus 34 dG~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~-~~-----~~~~v~--~~ 102 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGH-NHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALT-PE-----GLDKVF--FV 102 (413)
T ss_pred CCCEEEEcCccHHhhccCC-CCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhC-CC-----CCCEEE--Ec
Confidence 5678999998742121221 3344555555555322 223332223 34555555544 21 145777 89
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhC-C------------CCeeeeeecCC----CCCCcChHhHH
Q 013839 124 LSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDA-Q------------IPERTYHYYDP----DSKSLDFAALM 186 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~----~~~~~d~e~l~ 186 (435)
+||++|+..+..++....++++|++.+++|.+........ + .+++.+|..+. .++..|++.|+
T Consensus 103 ~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 182 (413)
T cd00610 103 NSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALE 182 (413)
T ss_pred CcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHH
Confidence 9999999998544433567899999999998865433322 1 23444544210 12455899999
Q ss_pred HHhhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEE
Q 013839 187 DDIKNAPDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCA 265 (435)
Q Consensus 187 ~~i~~~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 265 (435)
+.+.+++.+++++++...+|++|..+ +.+.+++|.++|++||+++|+||+|.+++..+ ........ +.... +
T Consensus 183 ~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g---~~~~~~~~-~~~~d---~ 255 (413)
T cd00610 183 EALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG---KMFAFEHF-GVEPD---I 255 (413)
T ss_pred HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhhHhhc-CCCCC---e
Confidence 99885434667777777778889876 67779999999999999999999998775432 11122111 21112 4
Q ss_pred ecccccccccCCcccEEEEEecChhHHHHHHHHH--HHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 266 QSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQI--QQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 266 ~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
.|+||.++ .|+|+||+++ +++ +++.+ .......+.+.+.+++.++.++|+.-. + ....++++
T Consensus 256 ~t~sK~l~-~g~~~g~~~~---~~~----~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~------~--~~~~~~~~ 319 (413)
T cd00610 256 VTLGKGLG-GGLPLGAVLG---REE----IMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLE------E--EGLLENAA 319 (413)
T ss_pred EEEccccc-CccccEEEEE---cHH----HHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHH------h--ccHHHHHH
Confidence 58899999 4899999964 777 77765 232233455677777777777664211 1 34556677
Q ss_pred HHHHHHHHHHHhhCCC-CCccccccCcceeEecCC------------CHHHHHHHhhhccEEEeCCC----cEEecc-CC
Q 013839 344 RKRTTLRQNLEKLGSS-LNWEHITNQLGMFCFSGL------------TPYQVDRLAKEFHIYMTQDG----RISMAG-VT 405 (435)
Q Consensus 344 ~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~------------~~~~~~~ll~~~gI~i~pgg----Ris~~~-~~ 405 (435)
++.+.+.+.|+.+... .......+ .|.+.++.+ ....+...+.++||.+.|++ |++++. .+
T Consensus 320 ~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t 398 (413)
T cd00610 320 ELGEYLRERLRELAEKHPLVGDVRG-RGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIIT 398 (413)
T ss_pred HHHHHHHHHHHHHHhhCCcEEEeec-CceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCC
Confidence 7777777777665321 00111223 345555533 12334334456899999973 887654 37
Q ss_pred CCcHHHHHHHHHHHH
Q 013839 406 TGNVNYLANAIHEVT 420 (435)
Q Consensus 406 ~e~i~~~~~~l~~~l 420 (435)
++++++++++|++++
T Consensus 399 ~~~i~~~~~~l~~~l 413 (413)
T cd00610 399 EEEIDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHHHHHHhC
Confidence 899999999998753
No 148
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=7.9e-23 Score=200.72 Aligned_cols=326 Identities=17% Similarity=0.075 Sum_probs=209.6
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcC---CCC---CCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG---SEF---LESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.+.++|+.++|+.. ...+.+++++.+++.. +.. ..|.......+|.+.+++++ +. + ..+ ++
T Consensus 45 ~~~~~~~sn~ylgl---~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~-g~------~-~~l--~~ 111 (402)
T TIGR01821 45 KDVTVWCSNDYLGM---GQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH-GK------E-SAL--VF 111 (402)
T ss_pred eeEEEeEccCcCCC---CCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh-CC------C-eEE--EE
Confidence 67899999998444 4444455544444431 111 11233334578888898887 32 1 223 57
Q ss_pred CCchhHHHHHHHHHHHhC--CCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC-CCcEEEE
Q 013839 124 LSGTGACRLFAEFQRRFH--PESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP-DSSFFLL 200 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~v~ 200 (435)
.+|++|+..+ +..+.. +|+.|+.....+......+...|+++..++. .|++++++.++... +++++++
T Consensus 112 ~sG~~an~~a--i~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~ 182 (402)
T TIGR01821 112 TSGYVANDAT--LATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIA 182 (402)
T ss_pred CchHHHHHHH--HHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEE
Confidence 7888887777 333333 6777776655555555556667776554432 26777887776432 3578999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhc-CCeEEEEecccccccccCCcc
Q 013839 201 HPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLED-EHLIGCAQSYAKSMGLYGHRV 279 (435)
Q Consensus 201 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~g~~G~Rv 279 (435)
+++|+||||.+.+ +++|.++|++|++++|+||+|....+++... ......+. .+.+++++||||.+|++|
T Consensus 183 ~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~---g~~~~~~~~~~~div~~t~sKa~g~~G--- 253 (402)
T TIGR01821 183 FESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGG---GIAERDGLMHRIDIIEGTLAKAFGVVG--- 253 (402)
T ss_pred EcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCC---ccchhccCCCCCeEEEEechhhhccCC---
Confidence 9999999999887 6689999999999999999987333322111 11111121 234688899999999888
Q ss_pred cEEEEEecChhHHHHHHHHHHHHhhc--cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 280 GCLSILCVDSKQAAAIRSQIQQIARA--MYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 280 G~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
||+++ +++ +++.+...... .+.+.+...+.++.++|+.. +.....++++.++++++.+.|+++|
T Consensus 254 G~i~~---~~~----~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g 319 (402)
T TIGR01821 254 GYIAA---SRK----LIDAIRSYAPGFIFTTSLPPAIAAGATASIRHL-------KESQDLRRAHQENVKRLKNLLEALG 319 (402)
T ss_pred ceeec---CHH----HHHHHHHhCcCceecCcCCHHHHHHHHHHHHHh-------hcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 89853 777 77777654432 22345666666666666432 1124455667788889999999887
Q ss_pred CCCCccccccCcceeEe-cCC--C-HHHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHHHH
Q 013839 358 SSLNWEHITNQLGMFCF-SGL--T-PYQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 358 ~~~~~~~~~~~~g~~~~-~~~--~-~~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~l~ 421 (435)
. ++..+.++++.+ ++. . .+....+++++||.+.+. | ||++.. .+++++++++++|+++++
T Consensus 320 ~----~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~ 395 (402)
T TIGR01821 320 I----PVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWD 395 (402)
T ss_pred C----CcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 4 455555554332 222 1 234455656679999752 2 888642 388999999999999987
Q ss_pred hhh
Q 013839 422 SEQ 424 (435)
Q Consensus 422 ~~~ 424 (435)
+..
T Consensus 396 ~~~ 398 (402)
T TIGR01821 396 RLG 398 (402)
T ss_pred HcC
Confidence 654
No 149
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.92 E-value=7.8e-23 Score=197.76 Aligned_cols=284 Identities=14% Similarity=0.081 Sum_probs=191.4
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChh--hHHHHhhCCCCeeeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSN--HHNIWRDAQIPERTYH 171 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~ 171 (435)
..++++.+++++. ... ++.++ ++.+|++|+.++ +.+++.+||+|+++.++|.. +...++..|++++.++
T Consensus 34 ~~~~~~~la~~~g-~~~----~~~~~--~~~~~t~al~~~--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 34 MDEILEGLRYVFQ-TEN----GLTFL--LSGSGTGAMEAA--LSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred HHHHHHHHHHHhc-CCC----CCEEE--EecCcHHHHHHH--HHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 4578888888873 321 23455 788889998888 66778899999999987765 4567788999999998
Q ss_pred ecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHH
Q 013839 172 YYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQA 251 (435)
Q Consensus 172 ~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~ 251 (435)
.. +++.+|++++++.++. .+++++++++|+||||...+ +++|.++|+++|+++++|+++. ++... .+
T Consensus 105 ~~--~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~~~li~D~~~~-~g~~~-----~~ 171 (356)
T cd06451 105 KP--WGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNP---LEGIGALAKKHDALLIVDAVSS-LGGEP-----FR 171 (356)
T ss_pred cC--CCCCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccC---HHHHHHHHHhcCCEEEEeeehh-ccCcc-----cc
Confidence 72 3468999999999972 26789999999999999887 4578889999999999999854 22111 11
Q ss_pred HHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHH---Hhh----------------ccccCCCh
Q 013839 252 IRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQ---IAR----------------AMYGSPPV 312 (435)
Q Consensus 252 ~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~---~~~----------------~~~~~~~~ 312 (435)
.. .. +..+++.|.+|.++.+ .++||+++ +++ +++.+.. ... ....+++.
T Consensus 172 ~~---~~-~~d~~~~s~~K~l~~p-~g~G~l~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 239 (356)
T cd06451 172 MD---EW-GVDVAYTGSQKALGAP-PGLGPIAF---SER----ALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPV 239 (356)
T ss_pred cc---cc-CccEEEecCchhccCC-CCcceeEE---CHH----HHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChH
Confidence 11 11 2346677899999854 46899974 777 5544432 000 11122333
Q ss_pred hHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc---CcceeEecC----CCHHHHHHH
Q 013839 313 HGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN---QLGMFCFSG----LTPYQVDRL 385 (435)
Q Consensus 313 ~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~g~~~~~~----~~~~~~~~l 385 (435)
..+.++.+++..-. ....+...++.+++++++.+.|...+. ....+ ..+.+.|+. .+.+.+.+.
T Consensus 240 ~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (356)
T cd06451 240 NLLYALREALDLIL-----EEGLENRWARHRRLAKALREGLEALGL----KLLAKPELRSPTVTAVLVPEGVDGDEVVRR 310 (356)
T ss_pred HHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHHHcCC----eeccCcccCCCceEEEECCCCCCHHHHHHH
Confidence 33444545553211 134566778888888999999988764 22221 234444443 344445434
Q ss_pred hhhc-cEEEeCC------C--cEEeccC-CCCcHHHHHHHHHHHH
Q 013839 386 AKEF-HIYMTQD------G--RISMAGV-TTGNVNYLANAIHEVT 420 (435)
Q Consensus 386 l~~~-gI~i~pg------g--Ris~~~~-~~e~i~~~~~~l~~~l 420 (435)
|.++ ||.+.+| + |++++.. +++++++++++|++++
T Consensus 311 L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 311 LMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred HHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 4555 9999875 1 9998543 7899999999998876
No 150
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.92 E-value=3.5e-23 Score=200.33 Aligned_cols=281 Identities=12% Similarity=0.071 Sum_probs=187.4
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeec
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYY 173 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 173 (435)
..++++.+++++ +. +++. +++|+++++.++ +.+++.+||+|+++.++|......++..|++++.++..
T Consensus 46 ~~~l~~~la~~~-g~-------~~i~--~~~g~t~al~~~--l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (361)
T cd06452 46 IKDFHHDLAEFL-GM-------DEAR--VTPGAREGKFAV--MHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPNT 113 (361)
T ss_pred HHHHHHHHHHHc-CC-------ceEE--EeCCHHHHHHHH--HHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEecC
Confidence 468899999987 33 2666 899999998888 67778899999999998877767788999999999873
Q ss_pred CCCCCCcChHhHHHHhhcCC----CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 174 DPDSKSLDFAALMDDIKNAP----DSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 174 ~~~~~~~d~e~l~~~i~~~~----~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
...++.+|++++++++.+.. ++++++++++|+||||.. .++++|.++|+++++++|+|++|...... .
T Consensus 114 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~~i~~~~~~~~~~vivD~a~~~g~~~-~---- 185 (361)
T cd06452 114 GHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAKKIAKVCHEYGVPLLLNGAYTVGRMP-V---- 185 (361)
T ss_pred CCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHHHHHHHHHHcCCeEEEECCcccCCcC-C----
Confidence 22246899999999886321 367899999999999976 45679999999999999999998642211 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc--------ccCCChhHHHHHHHH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM--------YGSPPVHGILLVATI 321 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~q~~~~~~ 321 (435)
+... .+..++++|+||.++ ++.|+||+++ +++ +++.+.+..... ..+.....+.++.+.
T Consensus 186 -~~~~----~~~d~~~~s~~K~l~-~~~~~G~l~~---~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 252 (361)
T cd06452 186 -SGKE----LGADFIVGSGHKSMA-ASAPIGVLAT---TEE----WADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMAS 252 (361)
T ss_pred -CHHH----cCCCEEEecCCcccc-CCCCeEEEEE---CHH----HHHHHhccccccccceeeeeccccCchHHHHHHHH
Confidence 1111 135789999999998 5569999974 777 666665543211 011111122223233
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCCcccc---ccCcceeEecCC------------C-HHHHHH
Q 013839 322 LSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL-GSSLNWEHI---TNQLGMFCFSGL------------T-PYQVDR 384 (435)
Q Consensus 322 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~---~~~~g~~~~~~~------------~-~~~~~~ 384 (435)
+.. +.+.++...+ ..++++++.+.|+++ | +.+. ..... |..+.. + .++.+.
T Consensus 253 l~~------~~~~~~~~~~-~~~~~~~l~~~L~~l~g----~~v~~~~~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
T cd06452 253 FPH------VKERVKRWDE-EVEKARWFVAELEKIEG----IKQLGEKPKNHD-LMFFETPSFDEIAKKHKRRGYFLYSE 320 (361)
T ss_pred HHH------HHHHHHHHHH-HHHHHHHHHHHHhcCCC----eEEECCCCCCCc-eEEEEcCCcchhhhhccccchhHHHH
Confidence 321 1122333222 233457888899887 4 3333 12222 222211 1 134455
Q ss_pred HhhhccEEEeCCC-----cEEeccCCCCcHHHHHHHHHHHH
Q 013839 385 LAKEFHIYMTQDG-----RISMAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 385 ll~~~gI~i~pgg-----Ris~~~~~~e~i~~~~~~l~~~l 420 (435)
| +++||.+...| |++..+.++++++.++++|+++.
T Consensus 321 L-~~~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 321 L-KKRGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred H-HHcCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 5 56799976543 78874448899999999998654
No 151
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=7.1e-23 Score=199.44 Aligned_cols=336 Identities=13% Similarity=0.079 Sum_probs=215.5
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++...+|+..|.....-|. .++++++++.+++... .. . ......++++.+++++..... .+.+. ++++|
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~-~~-~-~~~~~~~~~~~la~~l~~~~~----~~~~~--~~~sG 95 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDI-WH-V-SNLFTNSLQEEVASLLAENSA----GDLVF--FCNSG 95 (377)
T ss_pred CCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhc-cc-c-ccccCCHHHHHHHHHHHhcCC----CCEEE--EeCCc
Confidence 35678999988862111232 3344555555555432 11 1 123456788999999854321 13566 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH-HHhhCCCCee---eeeecCCCCC--CcChHhHHHHhhcCCCCcEEEE
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHN-IWRDAQIPER---TYHYYDPDSK--SLDFAALMDDIKNAPDSSFFLL 200 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~---~v~~~~~~~~--~~d~e~l~~~i~~~~~~~~~v~ 200 (435)
++|+..+..+.......++|++.+++|.+... .+...+.... ..+..++..+ -.|++.+++.+. +++++++
T Consensus 96 ~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~ii 172 (377)
T PRK02936 96 AEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN---EEVAAVM 172 (377)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc---CCeEEEE
Confidence 99999985433323334779999999875432 2222221110 1111000000 127889998886 5688999
Q ss_pred eCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcc
Q 013839 201 HPSAHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRV 279 (435)
Q Consensus 201 ~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~Rv 279 (435)
+..+++++|.. .+++.+++|.++|++|++++|+||+|.++.+.+ .......+ +.... +.++||.++ +|+|+
T Consensus 173 ~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~~~~~~-~~~~d---i~t~sK~l~-~G~~i 244 (377)
T PRK02936 173 LEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG---TLFAYEQF-GLDPD---IVTVAKGLG-NGIPV 244 (377)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhh-CCCCc---EEEEccccc-CCCcc
Confidence 99999999987 488999999999999999999999998887653 12222222 22222 237999999 99999
Q ss_pred cEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--C
Q 013839 280 GCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL--G 357 (435)
Q Consensus 280 G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~ 357 (435)
||+++ +++ +.+.+.......+.+.+.++|.++.++|+... .+...++++++.+.+++.|++. +
T Consensus 245 g~v~~---~~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--------~~~~~~~~~~~~~~l~~~L~~~~~~ 309 (377)
T PRK02936 245 GAMIG---KKE----LGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK--------QPSFLEEVQEKGEYFLQKLQEELEH 309 (377)
T ss_pred EEEEE---cHH----HHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHHHHHHHHHhh
Confidence 99964 777 77777654444556788999999988885421 1233455666666666666653 1
Q ss_pred CCCCccccccCcceeEecCCC--HHHHHHHhhhccEEEeCCC----cEEe-ccCCCCcHHHHHHHHHHHH
Q 013839 358 SSLNWEHITNQLGMFCFSGLT--PYQVDRLAKEFHIYMTQDG----RISM-AGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 358 ~~~~~~~~~~~~g~~~~~~~~--~~~~~~ll~~~gI~i~pgg----Ris~-~~~~~e~i~~~~~~l~~~l 420 (435)
.+ .+.... ..|+++|+.+. .+.+...+.++||.+.|+| ||++ ...+++++++++++|++++
T Consensus 310 ~~-~~~~v~-~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 310 LE-CVKNIR-GKGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred CC-cEEeEe-ecceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 11 112222 35678888763 3445555677999999875 8885 3348999999999998753
No 152
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.92 E-value=9.7e-23 Score=201.41 Aligned_cols=289 Identities=12% Similarity=0.084 Sum_probs=196.7
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHH--HhCCCCEEEEcCCCChh----hHHHHhhCCCCe
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQR--RFHPESHIYFPDPTWSN----HHNIWRDAQIPE 167 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~--~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~ 167 (435)
..++|+.+++++.... +++|+ ++.|+++++.+++..+. .+.+||+|+++++.|+. +...++..|+++
T Consensus 78 ~~~~r~~la~~~~~~~-----~~~v~--~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 78 YELARKKVAAFINAST-----SREIV--FTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHcCCCC-----CCEEE--EeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 4689999999884321 35788 99999999988843221 46799999999997764 344556789999
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++.. . ++.+|++++++.+. ++++++++++++||||..++.+ +|.++|+++|+++++|++|.. ...+.
T Consensus 151 ~~v~~~-~-~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~~~---~I~~l~~~~g~~vivD~a~~~-g~~~~-- 219 (424)
T PLN02855 151 KFVGLT-P-DEVLDVEQLKELLS---EKTKLVATHHVSNVLGSILPVE---DIVHWAHAVGAKVLVDACQSV-PHMPV-- 219 (424)
T ss_pred EEEecC-C-CCCcCHHHHHHHhc---cCceEEEEeCccccccccCCHH---HHHHHHHHcCCEEEEEhhhhc-CCcCC--
Confidence 999872 3 34699999999997 6789999999999999999854 888999999999999999732 11111
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh---------------------hcc
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA---------------------RAM 306 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~---------------------~~~ 306 (435)
++ ...+.++++.|++|.+|.+| +||+++ +++ +++.+.... +..
T Consensus 220 ---~~----~~~~~d~~~~s~~K~~gp~G--~G~l~~---~~~----~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e 283 (424)
T PLN02855 220 ---DV----QTLGADFLVASSHKMCGPTG--IGFLWG---KSD----LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFE 283 (424)
T ss_pred ---Cc----hhcCCCEEEeecccccCCCc--cEEEEE---chh----hhhcCCCEecCCCceeeeecCccccCCChhhcc
Confidence 11 11234577999999888666 799975 666 544443210 011
Q ss_pred ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc-------CcceeEec--CC
Q 013839 307 YGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN-------QLGMFCFS--GL 377 (435)
Q Consensus 307 ~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-------~~g~~~~~--~~ 377 (435)
..+++.....++..+++.- .+...++.+++..+.++.+.+.|++++. +....+ ..+++.+. +.
T Consensus 284 ~GT~~~~~~~~l~~al~~~-----~~~g~~~i~~~~~~l~~~l~~~L~~~~g---~~i~~~~~~~~~~r~~~v~~~~~~~ 355 (424)
T PLN02855 284 AGTPAIGEAIGLGAAIDYL-----SEIGMDRIHEYEVELGTYLYEKLSSVPG---VRIYGPKPSEGVGRAALCAFNVEGI 355 (424)
T ss_pred CCChHHHHHHHHHHHHHHH-----HHhCHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCcccccCcccEEEEEECCc
Confidence 1223333344444444321 1134667778888888899998877631 333322 22333332 45
Q ss_pred CHHHHHHHhhhc-cEEEeCC--------------C--cEEeccC-CCCcHHHHHHHHHHHHHhhh
Q 013839 378 TPYQVDRLAKEF-HIYMTQD--------------G--RISMAGV-TTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 378 ~~~~~~~ll~~~-gI~i~pg--------------g--Ris~~~~-~~e~i~~~~~~l~~~l~~~~ 424 (435)
+.+.+.+.|.++ ||.++.| + |+|+... +++|++++++.|+++++.+.
T Consensus 356 ~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 356 HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 666665455555 9998853 1 9997532 78999999999999887654
No 153
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.92 E-value=2.7e-22 Score=197.35 Aligned_cols=328 Identities=16% Similarity=0.090 Sum_probs=208.2
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcC-CC-----CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEe
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-SE-----FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQ 122 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~ 122 (435)
+.+.++|+.++|... ...+.+++.+.+++.. +. ...|.+.....+|++.+++++ +. ++.+ +
T Consensus 45 ~~~~~~~~s~dylgl---~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~-g~------~~~~---~ 111 (407)
T PRK09064 45 EREVTVWCSNDYLGM---GQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH-GK------EAAL---V 111 (407)
T ss_pred CceEEEEECCCCcCC---CCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh-CC------CcEE---E
Confidence 467899999988443 4444454444444431 10 112334455678889999887 32 2233 4
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC-CCcEEEEe
Q 013839 123 ALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP-DSSFFLLH 201 (435)
Q Consensus 123 t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~v~~ 201 (435)
+.+|++|+..+..++....+++.|+.....+......+...|+++..++. .|++++++.++... +++++|++
T Consensus 112 ~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~ 184 (407)
T PRK09064 112 FTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAF 184 (407)
T ss_pred ECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 67777776666322222237776666655555555556667776654432 37788888776432 46789999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhc-CCeEEEEecccccccccCCccc
Q 013839 202 PSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLED-EHLIGCAQSYAKSMGLYGHRVG 280 (435)
Q Consensus 202 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~g~~G~RvG 280 (435)
++++||+|...+ +++|.++|++||+++|+||+|....+++... .+....+. .+.+++++||||.+|++| |
T Consensus 185 ~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~---g~~~~~~~~~~~div~~t~sKa~g~~G---G 255 (407)
T PRK09064 185 ESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGG---GIAERDGLMDRIDIIEGTLAKAFGVMG---G 255 (407)
T ss_pred eCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCC---ChHHhcCCCCCCeEEEEecchhhhccC---c
Confidence 999999998876 6689999999999999999986322221111 11122222 234788999999999888 9
Q ss_pred EEEEEecChhHHHHHHHHHHHHhhcc--ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 013839 281 CLSILCVDSKQAAAIRSQIQQIARAM--YGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGS 358 (435)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 358 (435)
|+++ +++ +++.+.+..... ..+.+...+.++.+.++.- +.....+++++++++++.+.|+++|.
T Consensus 256 ~~~~---~~~----~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g~ 321 (407)
T PRK09064 256 YIAG---SAA----LVDAVRSYAPGFIFTTSLPPAIAAAALASIRHL-------KESNEERERHQERAAKLKAALDAAGI 321 (407)
T ss_pred eEec---CHH----HHHHHHHhCccccccCcCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9853 777 777776654322 2344555555555555321 11234467888899999999998863
Q ss_pred CCCccccccCcceeEec--CC--CH-HHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHHHH
Q 013839 359 SLNWEHITNQLGMFCFS--GL--TP-YQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 359 ~~~~~~~~~~~g~~~~~--~~--~~-~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~l~ 421 (435)
++.++.++ ++++ +. .. +....+++++||.+.+. | ||++.. .+++++++++++|+++++
T Consensus 322 ----~~~~~~~~-iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~ 396 (407)
T PRK09064 322 ----PVMPNESH-IVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWA 396 (407)
T ss_pred ----CCCCCCCC-EEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 45545554 3333 22 22 34455666679999752 2 888742 388999999999999887
Q ss_pred hhh
Q 013839 422 SEQ 424 (435)
Q Consensus 422 ~~~ 424 (435)
+..
T Consensus 397 ~~~ 399 (407)
T PRK09064 397 RLG 399 (407)
T ss_pred HcC
Confidence 643
No 154
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=4.6e-23 Score=202.41 Aligned_cols=317 Identities=12% Similarity=0.092 Sum_probs=202.5
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCC-----CcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESIS-----ASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
..+++|+.|+| +. +. ++.+.++..+. .. ...|.+ ..|.+++++++++++....+. +.+++. ++.
T Consensus 20 ~~~~~l~~g~~-~~---~~-p~~~~~~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~--~~~ 88 (398)
T cd00613 20 QSMSFLGSGTY-KH---NP-PAVIKRNILEN-EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANAS--LQD 88 (398)
T ss_pred cCccccccccc-CC---cC-cHHHHHHhccc-cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--Ccccee--ccC
Confidence 45699999996 33 33 33444444443 22 334665 789999999999988433221 133555 566
Q ss_pred Cch-hHHHHHHHHHHHhCC--CCEEEEcCCCChhhHHHHhhCC----CCeeeeeecCCCCCCcChHhHHHHhhcCCCCcE
Q 013839 125 SGT-GACRLFAEFQRRFHP--ESHIYFPDPTWSNHHNIWRDAQ----IPERTYHYYDPDSKSLDFAALMDDIKNAPDSSF 197 (435)
Q Consensus 125 gg~-~a~~~~~~~~~~~~~--gd~Vlv~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 197 (435)
+|+ ++...+ +...+.+ ||+|++++|.|+.+...+...| ++++.++. ++++.+|++++++++. ++++
T Consensus 89 ~g~~~~~~~~--~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~---~~t~ 161 (398)
T cd00613 89 EATAAAEAAG--LAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS--DEGGTVDLEALKEEVS---EEVA 161 (398)
T ss_pred chHHHHHHHH--HHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc--CCCCCcCHHHHHHhcC---CCeE
Confidence 554 443333 3334555 9999999999999988887777 88888887 3345789999999987 6789
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc--
Q 013839 198 FLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY-- 275 (435)
Q Consensus 198 ~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~-- 275 (435)
++++++|+ |||.+. +.+++|.++|++||+++|+|+++...... . .. +..+.++++.|++|.+ +|
T Consensus 162 ~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~-~--~~-------~~~~~d~~~~s~~K~~-~p~g 227 (398)
T cd00613 162 ALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGL-K--PP-------GEYGADIVVGNLQKTG-VPHG 227 (398)
T ss_pred EEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCC-C--Ch-------HHcCCCEEEeeccccC-CCCC
Confidence 99998885 899883 44689999999999999999985432211 1 10 1124679999999998 55
Q ss_pred --CCcccEEEEEecChhHHHHHHHHHHHH-----------------------------h-hccccCCChhHHHHHHHHhC
Q 013839 276 --GHRVGCLSILCVDSKQAAAIRSQIQQI-----------------------------A-RAMYGSPPVHGILLVATILS 323 (435)
Q Consensus 276 --G~RvG~~~~~~~~~~~~~~~~~~l~~~-----------------------------~-~~~~~~~~~~~q~~~~~~l~ 323 (435)
|+|+||+.+ +++ +++.+... . ...+.+.+...+.+...+..
T Consensus 228 ~Ggp~~g~l~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~ 300 (398)
T cd00613 228 GGGPGAGFFAV---KKE----LVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVY 300 (398)
T ss_pred CCCCceeEEEE---hhh----hHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHH
Confidence 799999964 666 54432100 0 01111222333333333332
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCccee--EecCC------CHHHHHHHhhhccEEEeC
Q 013839 324 DPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMF--CFSGL------TPYQVDRLAKEFHIYMTQ 395 (435)
Q Consensus 324 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~--~~~~~------~~~~~~~ll~~~gI~i~p 395 (435)
.. .+..++.+++++++++++.+.|++++.. . .+.+.++ +++.+ +.+.+.+.|.++||.+..
T Consensus 301 ~~------~~g~~~~~~~~~~~~~~l~~~L~~~~~~---~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~ 369 (398)
T cd00613 301 LG------PEGLKEIAERAHLNANYLAKRLKEVGGV---L--PFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPT 369 (398)
T ss_pred hC------HHHHHHHHHHHHHHHHHHHHHHHhcCCc---c--cCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccc
Confidence 22 1456778899999999999999988641 1 1222222 23322 223343334568988765
Q ss_pred ----C-C--cEEecc-CCCCcHHHHHHHH
Q 013839 396 ----D-G--RISMAG-VTTGNVNYLANAI 416 (435)
Q Consensus 396 ----g-g--Ris~~~-~~~e~i~~~~~~l 416 (435)
+ + |+++.. .++++++++++.|
T Consensus 370 ~~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 370 MYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 2 2 888643 3789999888764
No 155
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.92 E-value=1.3e-22 Score=199.14 Aligned_cols=292 Identities=16% Similarity=0.123 Sum_probs=188.8
Q ss_pred CCCCCcc----cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHH-HHHHHhCCCCEEEEcCCCChhhH----
Q 013839 87 ESISASV----STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFA-EFQRRFHPESHIYFPDPTWSNHH---- 157 (435)
Q Consensus 87 ~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~-~~~~~~~~gd~Vlv~~p~y~~~~---- 157 (435)
.|....+ ..++|+.+++++ +.. ++++. ++.|+++++.++. .+...+++||+|++++|.|....
T Consensus 51 ~~~~~~~~~~~~~~l~~~ia~~~-~~~-----~~~v~--~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~ 122 (397)
T TIGR01976 51 AYESSRRADQVVDDAREAVADLL-NAD-----PPEVV--FGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWL 122 (397)
T ss_pred CchHHHHHHHHHHHHHHHHHHHc-CCC-----CCeEE--EeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHH
Confidence 3554444 458888888887 332 33576 8899999887764 22234689999999999886543
Q ss_pred HHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccC
Q 013839 158 NIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAY 237 (435)
Q Consensus 158 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay 237 (435)
..++..|++++.++. +++++.+|++++++.+. ++++++++++|+||||...+ +++|+++|++||+++|+|+++
T Consensus 123 ~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~ 195 (397)
T TIGR01976 123 QAAERAGAKVKWARV-DEATGELHPDDLASLLS---PRTRLVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVH 195 (397)
T ss_pred HHHHhcCCEEEEEec-cccCCCcCHHHHHHhcC---CCceEEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhh
Confidence 445678999999987 34457899999999997 67899999999999999875 668999999999999999995
Q ss_pred CCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc----------c
Q 013839 238 QGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM----------Y 307 (435)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~----------~ 307 (435)
.. .... ..+ .+ .+..+++.|++|.+| +|+|++++ +++ +++.+....... .
T Consensus 196 ~~-~~~~-----~~~---~~-~~~d~~~~s~~K~~g---~~~G~l~~---~~~----~~~~l~~~~~~~~~~~~~~~~~~ 255 (397)
T TIGR01976 196 YA-PHGL-----IDV---QA-TGADFLTCSAYKFFG---PHMGILWG---RPE----LLMNLPPYKLTFSYDTGPERFEL 255 (397)
T ss_pred hc-cccC-----CCH---HH-cCCCEEEEechhhcC---CceEEEEE---cHH----HHhhCCCccccCccCCCcchhcC
Confidence 32 1111 011 11 134566789999975 56899864 777 655554322110 1
Q ss_pred cCCChhHHHHHHH---HhCChh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc-----CcceeE
Q 013839 308 GSPPVHGILLVAT---ILSDPN------LKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN-----QLGMFC 373 (435)
Q Consensus 308 ~~~~~~~q~~~~~---~l~~~~------l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-----~~g~~~ 373 (435)
.+++.....++.. .+.+.+ ..+......++.+++..+.++++.+.|++++. +.+..+ .++++.
T Consensus 256 gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~ 332 (397)
T TIGR01976 256 GTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPG---VTLYGVARLAARVPTVS 332 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCccCCCceEE
Confidence 1222222222222 222111 01111123567778888888899999887752 334332 344333
Q ss_pred ec--CCCHHHHHHHhhhccEEEeCC-----------------C--cEEeccC-CCCcHHHHHHHH
Q 013839 374 FS--GLTPYQVDRLAKEFHIYMTQD-----------------G--RISMAGV-TTGNVNYLANAI 416 (435)
Q Consensus 374 ~~--~~~~~~~~~ll~~~gI~i~pg-----------------g--Ris~~~~-~~e~i~~~~~~l 416 (435)
+. +.+.+.+.+.|+++||.+..+ + |+|+... +++++++++++|
T Consensus 333 ~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 333 FTVHGLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EEeCCcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 22 344555544457789999754 2 9987433 678888888764
No 156
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.92 E-value=2.1e-22 Score=197.02 Aligned_cols=295 Identities=12% Similarity=0.084 Sum_probs=202.8
Q ss_pred cccHHHHHHHHHhH---cCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhh--HHHHhhCCCC
Q 013839 92 SVSTKMVEESVKLV---YGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNH--HNIWRDAQIP 166 (435)
Q Consensus 92 ~g~~~lr~~ia~~l---~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~ 166 (435)
.+..++++.+.+.+ ++... .+.++ ++.+|++++..+ +..++.+||+|++.+++|... ...++..|++
T Consensus 38 ~~~~~~~~~~~~~l~~~~g~~~----~~~vi--~~~~gt~a~~~a--~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~ 109 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFKTKS----GTPFI--FPTTGTGAWESA--LTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFD 109 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCC----CCEEE--EeCCcHHHHHHH--HHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCc
Confidence 34566666666554 23321 12344 788889998877 666789999999999888655 4667788999
Q ss_pred eeeeeecCCCCCCcChHhHHHHhhcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 167 ERTYHYYDPDSKSLDFAALMDDIKNAP-DSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 167 ~~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
++.++. +.+..+|++++++.+++.. ++++++++++++||||..++.+++.++++ |+++|+++|+|+++. +...+.
T Consensus 110 v~~v~~--~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s-~g~~~i 185 (401)
T PLN02409 110 VDVVES--PWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSS-IGALDF 185 (401)
T ss_pred eEEEEC--CCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEcccc-cCCccc
Confidence 999987 3334689999999998421 26899999999999999999776666655 999999999999964 221111
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhh---------------c--c-c
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIAR---------------A--M-Y 307 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~---------------~--~-~ 307 (435)
.+ +..+.++++.|.+|.++.| .++||+++ +++ .++.+..... . . .
T Consensus 186 -----d~----~~~~~D~~~~s~~K~l~~P-~G~G~l~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
T PLN02409 186 -----RM----DEWGVDVALTGSQKALSLP-TGLGIVCA---SPK----ALEASKTAKSPRVFFDWADYLKFYKLGTYWP 248 (401)
T ss_pred -----cc----cccCccEEEEcCccccCcC-CCcceeEE---CHH----HHHHHhcCCCCCeecCHHHHHHHHhcCCCCC
Confidence 11 1123457777789998644 36899975 777 5444432110 0 0 2
Q ss_pred cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC----cceeEec----CCCH
Q 013839 308 GSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ----LGMFCFS----GLTP 379 (435)
Q Consensus 308 ~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~g~~~~~----~~~~ 379 (435)
.+++...+.++..+++.-. +...++.+++++++++++++.|+.+|. ....+. .+...++ +.+.
T Consensus 249 ~Tp~~~~~~al~~al~~~~-----~~G~e~i~~~~~~l~~~l~~~L~~~g~----~~~~~~~~~~s~~v~~~~~p~~~~~ 319 (401)
T PLN02409 249 YTPSIQLLYGLRAALDLIF-----EEGLENVIARHARLGEATRLAVEAWGL----KLCTKKPEWRSDTVTAVVVPEGIDS 319 (401)
T ss_pred CCccHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHHHcCC----eeccCChhhcccceEEEeCCCCCCH
Confidence 3556666667766665321 245788889999999999999988864 332221 2222233 4455
Q ss_pred HHH-HHHhhhccEEEeCC-----C---cEEec-cCCCCcHHHHHHHHHHHHHhhh
Q 013839 380 YQV-DRLAKEFHIYMTQD-----G---RISMA-GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 380 ~~~-~~ll~~~gI~i~pg-----g---Ris~~-~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
+.+ ..+++++||.+.+| | ||+.. ..+.+++..++++|.+++.+++
T Consensus 320 ~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 320 AEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred HHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 444 67778899999976 2 99853 3478899999999999988755
No 157
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.91 E-value=3.2e-22 Score=194.68 Aligned_cols=333 Identities=10% Similarity=0.027 Sum_probs=204.3
Q ss_pred eeeecceecCCCCCcccchHHHHHHHHhc---CCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 53 INLGVGAYRDDKGRPVVLQCVREAEAKIA---GSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 53 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
+||+..+|......+...+...+++++.. .+....|+...++.+|++.+++++... +.+ ++++|..+
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-------~al---~~~sG~~a 70 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE-------SAI---LYSDGAST 70 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC-------cEE---EecCcHHH
Confidence 46677776444333333333333333322 112233777778999999999998432 233 46677666
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC--------CCCcEEEEe
Q 013839 130 CRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA--------PDSSFFLLH 201 (435)
Q Consensus 130 ~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~--------~~~~~~v~~ 201 (435)
...+ +.+++++||+|+++++.|..+...+...+++++.++..+. -+++.+.+.+... .+++++|++
T Consensus 71 ~~~~--i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~ 144 (392)
T PLN03227 71 TSST--VAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVV 144 (392)
T ss_pred HHHH--HHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEE
Confidence 6665 6778899999999999999988877777777766654211 1344444444311 136789999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh--hhcCCeEEEEecccccccccCCcc
Q 013839 202 PSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF--LEDEHLIGCAQSYAKSMGLYGHRV 279 (435)
Q Consensus 202 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~s~SK~~g~~G~Rv 279 (435)
.++.||+|.+.+ +++|.++|++||+++|+||+|. +...+. ...+....+ ....+.++++.|+||.+| ++.
T Consensus 145 E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~-~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~g 216 (392)
T PLN03227 145 EGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGK-SGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVG 216 (392)
T ss_pred cCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCC-CCCcHHHHcCCCCCCCceEEEeechhhhh---ccC
Confidence 999999999988 5689999999999999999986 432211 001122211 112345888999999876 444
Q ss_pred cEEEEEecChhHHHHHHHHHHHHhhccccCC--ChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 280 GCLSILCVDSKQAAAIRSQIQQIARAMYGSP--PVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 280 G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
|++++ +++ +++.++.......++. +++.+.++..++... ...+..+++++++.+++++.|++.+
T Consensus 217 g~v~~---~~~----~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~-------~~~~~~~~~l~~~~~~l~~~L~~~~ 282 (392)
T PLN03227 217 GMTVG---SEE----VVDHQRLSGSGYCFSASAPPFLAKADATATAGE-------LAGPQLLNRLHDSIANLYSTLTNSS 282 (392)
T ss_pred cEEec---CHH----HHHHHHHhCcCccccCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHhcC
Confidence 88853 777 7766654333222332 344555555454321 1124567788888899999987654
Q ss_pred CCCCccc------cccCcceeEecCCCH-------------HHHHHHhhhccEEEeCC-------------C--cEEec-
Q 013839 358 SSLNWEH------ITNQLGMFCFSGLTP-------------YQVDRLAKEFHIYMTQD-------------G--RISMA- 402 (435)
Q Consensus 358 ~~~~~~~------~~~~~g~~~~~~~~~-------------~~~~~ll~~~gI~i~pg-------------g--Ris~~- 402 (435)
.+...++ .....+..+.+.+.. ..+.+.+.++||.+.+. . |+++.
T Consensus 283 ~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~ 362 (392)
T PLN03227 283 HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANA 362 (392)
T ss_pred CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecC
Confidence 3210000 011112233332211 13433445689988531 1 77764
Q ss_pred cCCCCcHHHHHHHHHHHHHhh
Q 013839 403 GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 403 ~~~~e~i~~~~~~l~~~l~~~ 423 (435)
..++|+++++++.|++++++.
T Consensus 363 ~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 363 SHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 348999999999999998764
No 158
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.91 E-value=3.3e-22 Score=193.77 Aligned_cols=287 Identities=15% Similarity=0.083 Sum_probs=196.4
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhh--HHHHhhCCCCeeeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNH--HNIWRDAQIPERTYH 171 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~ 171 (435)
..++|+.+++++.... . ++.|. +|.||++++..+ +.+++.+||.+++..+++.+. ...++..|.+++.++
T Consensus 37 ~~~~r~~la~l~~~~~-~---~~~i~--~t~~~t~al~~~--~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~ 108 (363)
T TIGR02326 37 VEQIRQQLLALATAEE-G---YTSVL--LQGSGTFAVEAV--IGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVD 108 (363)
T ss_pred HHHHHHHHHHHhCCCC-C---ceEEE--EcCCCHHHHHHH--HHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEe
Confidence 4567888888773321 0 12566 899999999988 667778888888777666544 356788899999998
Q ss_pred ecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHH
Q 013839 172 YYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQA 251 (435)
Q Consensus 172 ~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~ 251 (435)
. ++++.+|++++++.+.+. ++++++++++++||||..++. ++|.++|++||+++|+|+++ .++..+ .+
T Consensus 109 ~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~i---~~I~~l~~~~g~~livD~~~-~~g~~~-----~~ 176 (363)
T TIGR02326 109 T--GEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILNPI---EAVAKLAHRHGKVTIVDAMS-SFGGIP-----ID 176 (363)
T ss_pred C--CCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccCcH---HHHHHHHHHcCCEEEEEccc-cccCcc-----cc
Confidence 7 345689999999998754 345678888999999999874 59999999999999999874 333211 12
Q ss_pred HHHhhhcCCeEEEEecccccc-cccCCcccEEEEEecChhHHHHHHHHHHHH------------------hhccccCCCh
Q 013839 252 IRIFLEDEHLIGCAQSYAKSM-GLYGHRVGCLSILCVDSKQAAAIRSQIQQI------------------ARAMYGSPPV 312 (435)
Q Consensus 252 ~~~~~~~~~~~i~~~s~SK~~-g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~------------------~~~~~~~~~~ 312 (435)
+.. .+..++++|++|.+ |.+| +||+++ +++ .++.+... .....+.++.
T Consensus 177 ~~~----~~~D~~~~s~~K~l~~p~G--~G~l~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~ 243 (363)
T TIGR02326 177 IAE----LHIDYLISSANKCIQGVPG--FGFVIA---RQA----ELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPT 243 (363)
T ss_pred hhh----cCccEEEecCccccccCCc--ceEEEE---CHH----HHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcH
Confidence 221 13458889999987 5556 699974 776 33332210 0011235667
Q ss_pred hHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc---CcceeEec---C---CCHHHHH
Q 013839 313 HGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN---QLGMFCFS---G---LTPYQVD 383 (435)
Q Consensus 313 ~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~g~~~~~---~---~~~~~~~ 383 (435)
..+.++.+++..-. +. ...++.+++++++++++++.|+++|. ....+ ..+...|+ . .+...+.
T Consensus 244 ~~~~al~~al~~l~--~~--g~~~~~~~~~~~~~~~l~~~L~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 315 (363)
T TIGR02326 244 HVVHAFAQALLELE--KE--GGVAARHQRYQQNQKTLVAGMRALGF----EPLLDDEIQSPIITSFYSPEDPDYRFADFY 315 (363)
T ss_pred HHHHHHHHHHHHHH--Hh--hCHHHHHHHHHHHHHHHHHHHHHcCC----eeccCcccCCceEEEEECCCCCCCCHHHHH
Confidence 77777666664321 00 12566778999999999999988874 22221 23333333 2 3444554
Q ss_pred HHhhhccEEEeCCC-------cEEe-ccCCCCcHHHHHHHHHHHHH
Q 013839 384 RLAKEFHIYMTQDG-------RISM-AGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 384 ~ll~~~gI~i~pgg-------Ris~-~~~~~e~i~~~~~~l~~~l~ 421 (435)
+.|+++||.+.+|. ||++ +..+.+++++++++|++++.
T Consensus 316 ~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 316 QRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 55577899999883 9985 54588999999999998764
No 159
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=5.2e-22 Score=193.51 Aligned_cols=215 Identities=13% Similarity=0.099 Sum_probs=156.3
Q ss_pred CCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH----HhhCCC
Q 013839 90 SASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI----WRDAQI 165 (435)
Q Consensus 90 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~ 165 (435)
+..+..+|+++++++..+. +.+ ++++|++|+.++ +.+++.+||+|+++.|.|..+... ++..|+
T Consensus 62 ~~p~~~~Le~~iA~~~g~~--------~~l--~~~sG~~Ai~~a--l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 129 (400)
T PRK06234 62 GNPTSTEVENKLALLEGGE--------AAV--VAASGMGAISSS--LWSALKAGDHVVASDTLYGCTFALLNHGLTRYGV 129 (400)
T ss_pred CCccHHHHHHHHHHHhCCC--------cEE--EEcCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHhhCCe
Confidence 6678899999999998432 333 699999998777 777889999999999988765543 466888
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CceeeeeccCCCccCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVK--GHFPFFDMAYQGFASG 243 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~vi~Deay~~~~~~ 243 (435)
+++.++. .|+++++++++ ++++++++++|+||||.+.+ +++|.++|+++ ++++|+|++|....+.
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~---~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 130 EVTFVDT-------SNLEEVRNALK---ANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred EEEEECC-------CCHHHHHHHhc---cCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 8888764 27899999987 67899999999999999876 66888999997 9999999998765432
Q ss_pred CCcccHHHHHHhhhcCCeEEEEecccccccccCCcc-cEEEEEecChhHHHHHHHHHHHHh-h-ccccCCChhHHHHHHH
Q 013839 244 DLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRV-GCLSILCVDSKQAAAIRSQIQQIA-R-AMYGSPPVHGILLVAT 320 (435)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~q~~~~~ 320 (435)
. ++ + .+.++++.|+||.++.+|+|+ ||+++ +++ +++.++... . ......+......+..
T Consensus 197 ~------~l----~-~g~Divv~S~sK~l~g~g~~~gG~v~~---~~~----~~~~l~~~~~~~~~g~~l~p~~a~l~~~ 258 (400)
T PRK06234 197 R------PL----Q-LGADVVVHSATKYLNGHGDVIAGFVVG---KEE----FINQVKLFGIKDMTGSVIGPFEAFLIIR 258 (400)
T ss_pred C------ch----h-hCCcEEEeeccccccCCCCceeEEEEe---cHH----HHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 1 11 1 134689999999999899886 88853 777 666665432 1 2234455554444444
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 321 ILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 321 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
.|+. +....++..++...+.+.|+..+
T Consensus 259 ~l~t----------l~~r~~~~~~na~~~a~~L~~~~ 285 (400)
T PRK06234 259 GMKT----------LQIRMEKHCKNAMKVAKFLESHP 285 (400)
T ss_pred ccCc----------HHHHHHHHHHHHHHHHHHHHcCC
Confidence 4432 33444555567777777777654
No 160
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.91 E-value=8.4e-23 Score=199.31 Aligned_cols=293 Identities=13% Similarity=0.114 Sum_probs=199.3
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH-----hCC-CCEEEEcCCCChhhHH---HHhh
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR-----FHP-ESHIYFPDPTWSNHHN---IWRD 162 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~-----~~~-gd~Vlv~~p~y~~~~~---~~~~ 162 (435)
.+.+.++++++++....... ++++|+ +|+|+++++.++. .++ ..+ +|+|++..+.|+.+.. .++.
T Consensus 39 ~~~~~l~~a~~~~~~~~~~~--~~~~i~--~t~g~teal~~~~--~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~ 112 (382)
T TIGR03403 39 ATHPAIAEALDKLYKGINAR--DLDDII--ITSCATESNNWVL--KGVYFDEILKGGKNHIITTEVEHPAVRATCAFLES 112 (382)
T ss_pred HHHHHHHHHHHHHHHHcCcC--CCCeEE--EeCCHHHHHHHHH--HHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHH
Confidence 45678888888887433221 267888 9999999999883 332 245 4789998866655543 4567
Q ss_pred CCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccC
Q 013839 163 AQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFAS 242 (435)
Q Consensus 163 ~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~ 242 (435)
.|++++.+++ ++++.+|++++++++. ++++++++++|+||||..++.+ +|.++|+++|+++++|+++. +..
T Consensus 113 ~G~~v~~v~~--~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~~~---~I~~la~~~g~~~ivD~a~~-~g~ 183 (382)
T TIGR03403 113 LGVEVTYLPI--NEQGTITAEQVREAIT---EKTALVSVMWANNETGMIFPIK---EIGEICKERGVLFHTDAVQA-IGK 183 (382)
T ss_pred CCCEEEEEec--CCCCCCCHHHHHHhcc---cCCeEEEEEcccCCCccccCHH---HHHHHHHHcCCEEEEechhh-cCC
Confidence 8999999987 2446889999999987 6789999999999999999854 88899999999999999954 221
Q ss_pred CCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHH---HHHhhccccCCChhHHHHHH
Q 013839 243 GDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQI---QQIARAMYGSPPVHGILLVA 319 (435)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~q~~~~ 319 (435)
.+. +. ....-.+++.|++|.+|.+| +|++.+ .+.. .+...+ .........+++...+.++.
T Consensus 184 ~~~-----~~----~~~~~D~~~~s~~K~~gp~G--~g~l~v---r~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~ 247 (382)
T TIGR03403 184 IPV-----DV----QKAGVDFLSFSAHKFHGPKG--VGGLYI---RKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMG 247 (382)
T ss_pred Ccc-----Cc----cccCCCEEEEcchhhCCCCc--eEEEEE---CCCC--CCCCcccCCCCCCCcccCCcChHHHHHHH
Confidence 111 11 11123588899999988778 477753 2220 011111 00011123456777777777
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC----cc--eeEecCCCHHHHHHHhhhccEEE
Q 013839 320 TILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ----LG--MFCFSGLTPYQVDRLAKEFHIYM 393 (435)
Q Consensus 320 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~g--~~~~~~~~~~~~~~ll~~~gI~i 393 (435)
.++... .+.++..++++++.++++.+.|++++. +.+..+. .+ .|.+.+.+.+.+...|.++||.+
T Consensus 248 ~al~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v 318 (382)
T TIGR03403 248 EAMRLA------NEYLDFEKSHVRRLRDRLEDALLELPD---VFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAA 318 (382)
T ss_pred HHHHHH------HHhHHHHHHHHHHHHHHHHHHHhcCCC---EEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEE
Confidence 777432 244667778899999999999987642 4444332 12 23333556666644467889999
Q ss_pred eCC-------------------------C--cEEeccC-CCCcHHHHHHHHHHHHHhhh
Q 013839 394 TQD-------------------------G--RISMAGV-TTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 394 ~pg-------------------------g--Ris~~~~-~~e~i~~~~~~l~~~l~~~~ 424 (435)
+.| + |+|+... +++|+++++++|+++++++.
T Consensus 319 ~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 319 STGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred EchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 842 2 9997543 78999999999999887755
No 161
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.91 E-value=1.9e-21 Score=191.07 Aligned_cols=332 Identities=18% Similarity=0.117 Sum_probs=208.3
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCC---CCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFL---ESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
+.+.++|+.+.|+....++.+.+.+.+.+.....+... .+....-..+|.+.+++++. . + ..+ ++++
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g-~------~-~~~--~~~S 113 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG-K------E-AAL--LFTS 113 (406)
T ss_pred CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC-C------C-cEE--EeCC
Confidence 36799999999855533343344444433333221111 11112234677888888773 2 1 333 5777
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC-CCCcEEEEeCCC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA-PDSSFFLLHPSA 204 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~v~~~~p 204 (435)
|++|+..+...+....+||.|++....|......+...|.+++.++. .|++++++.+... ++++++++++++
T Consensus 114 G~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~v 186 (406)
T PRK13393 114 GYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFESV 186 (406)
T ss_pred cHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcCC
Confidence 77887777332222227787777776776666667777877666543 2667777776543 235789999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhc-CCeEEEEecccccccccCCcccEEE
Q 013839 205 HNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLED-EHLIGCAQSYAKSMGLYGHRVGCLS 283 (435)
Q Consensus 205 ~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~g~~G~RvG~~~ 283 (435)
+||+|.+.+ +++|.++|++|++++|+||+|....+++... .+....+. .+.+++++||||.+|++| ||++
T Consensus 187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~---g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~ 257 (406)
T PRK13393 187 YSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGG---GIAEREGLADRLTIIEGTLAKAFGVMG---GYIT 257 (406)
T ss_pred CCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCC---chhhhcCCCCCCeEEEEeCchhhcccC---ceee
Confidence 999999987 6688999999999999999976333222111 11111122 224688899999999888 8985
Q ss_pred EEecChhHHHHHHHHHHHHhhc--cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 013839 284 ILCVDSKQAAAIRSQIQQIARA--MYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLN 361 (435)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 361 (435)
+ +++ +++.+.+.... .+.+.+...+.++.++|+... +. ...+++++++++++.+.|++++.
T Consensus 258 ~---~~~----~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~------~~-~~~~~~~~~~~~~l~~~L~~~g~--- 320 (406)
T PRK13393 258 G---SAA----LCDFIRSFASGFIFTTSLPPAVAAGALASVRHLK------AS-SAERERHQDRVARLRARLDKAGI--- 320 (406)
T ss_pred C---CHH----HHHHHHHhCcCceecCccCHHHHHHHHHHHHHHh------hC-HHHHHHHHHHHHHHHHHHHHcCC---
Confidence 3 777 77777765443 233455566666666664321 11 22346678888899999988763
Q ss_pred ccccccCcceeEec-CC--C-HHHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHHHHhhh
Q 013839 362 WEHITNQLGMFCFS-GL--T-PYQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 362 ~~~~~~~~g~~~~~-~~--~-~~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~l~~~~ 424 (435)
...++.+.++.+. +- + .++...+++++||.+.++ | ||++.. .+++++++++++|++++++..
T Consensus 321 -~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~~ 398 (406)
T PRK13393 321 -PHLPNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARLG 398 (406)
T ss_pred -CcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhcC
Confidence 3445556544332 21 1 233455555579999642 2 888742 388999999999999887643
No 162
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=7.8e-22 Score=192.35 Aligned_cols=288 Identities=14% Similarity=0.093 Sum_probs=192.6
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeee
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHY 172 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 172 (435)
...++++.+++++ +.. ++. +++|+++++.++ +.+++.+||+|+++.++|......++..|++++.++.
T Consensus 64 ~~~~l~~~lA~~~-g~~-------~~~--~~~g~t~a~~~a--l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~ 131 (387)
T PRK09331 64 PIADFHEDLAEFL-GMD-------EAR--VTHGAREGKFAV--MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPK 131 (387)
T ss_pred HHHHHHHHHHHHh-CCC-------cEE--EeCCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeC
Confidence 4689999999998 332 445 799999998888 7777899999999999987777778889999999986
Q ss_pred cCCCCCCcChHhHHHHhhcC----CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCccc
Q 013839 173 YDPDSKSLDFAALMDDIKNA----PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKD 248 (435)
Q Consensus 173 ~~~~~~~~d~e~l~~~i~~~----~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~ 248 (435)
..++++.+|++.+++.+++. .++++++++++|+||||... ++++|.++|++||+++++|++|...... .
T Consensus 132 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~---~l~~I~~la~~~g~~livD~a~~~g~~~-~--- 204 (387)
T PRK09331 132 TGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA---DAKKVAKVAHEYGIPFLLNGAYTVGRMP-V--- 204 (387)
T ss_pred ccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc---cHHHHHHHHHHcCCEEEEECCcccCCcC-C---
Confidence 21345789999999998742 13689999999999999765 4679999999999999999997543211 1
Q ss_pred HHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc--------ccCCChhHHHHHHH
Q 013839 249 AQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM--------YGSPPVHGILLVAT 320 (435)
Q Consensus 249 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~q~~~~~ 320 (435)
+... .+..+++.|++|+++ .+.|+||+++ +++ +++.+.+..... ..+.+.....++..
T Consensus 205 --~~~~----~g~D~~~~s~~K~l~-~~~~~G~l~~---~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 270 (387)
T PRK09331 205 --DGKK----LGADFIVGSGHKSMA-ASAPSGVLAT---TEE----YADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMA 270 (387)
T ss_pred --CHHH----cCCCEEEeeCccccc-CCCCEEEEEE---CHH----HHhhcccccCCCcccceeeeceecCchHHHHHHH
Confidence 1111 134688999999998 5568999864 777 666654432111 11121111222222
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCCccccc---cCcceeEe--cCC---------CHHHHHHH
Q 013839 321 ILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL-GSSLNWEHIT---NQLGMFCF--SGL---------TPYQVDRL 385 (435)
Q Consensus 321 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~---~~~g~~~~--~~~---------~~~~~~~l 385 (435)
.+.. +.+..+ ..++..++.+++++.|+++ | +.... ...++..+ .++ +...+.+.
T Consensus 271 al~~------~~~~~~-~~~~~~~~~~~l~~~L~~l~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (387)
T PRK09331 271 SFPH------VVERVK-RWDEEVKKARWFVDELEKIEG----FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEE 339 (387)
T ss_pred HHHH------HHHHHH-HHHHHHHHHHHHHHHHhcCCC----EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHH
Confidence 3321 112222 3445566777888999888 5 33331 12222211 111 11234444
Q ss_pred hhhccEEEeCCC-----cEEeccCCCCcHHHHHHHHHHHHHhhh
Q 013839 386 AKEFHIYMTQDG-----RISMAGVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 386 l~~~gI~i~pgg-----Ris~~~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
|+++||...+.| |+...+.+.+++++++++|++++++..
T Consensus 340 L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~~ 383 (387)
T PRK09331 340 LKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKEIAEKYG 383 (387)
T ss_pred HHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHHHHHhcC
Confidence 467899965443 666544588999999999999887643
No 163
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.91 E-value=2.3e-22 Score=195.80 Aligned_cols=280 Identities=15% Similarity=0.129 Sum_probs=189.2
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhC---CCCEEEEcCCCChhh----HHHHhhCCC
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFH---PESHIYFPDPTWSNH----HNIWRDAQI 165 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~---~gd~Vlv~~p~y~~~----~~~~~~~g~ 165 (435)
...++|+.+++++.... ++++. +++|+++++.++ +.++.. +||+|++++++|+.. ....+..|+
T Consensus 44 ~~~~~~~~la~~~~~~~-----~~~v~--~~~g~t~a~~~~--~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 114 (373)
T cd06453 44 AYEAAREKVARFINAPS-----PDEII--FTRNTTEAINLV--AYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGA 114 (373)
T ss_pred HHHHHHHHHHHHhCCCC-----CCeEE--EeCCHHHHHHHH--HHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCc
Confidence 35678899998884321 35677 899999999888 566655 899999999999774 334457799
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
+++.++. ++++.+|++++++.+. ++++++++++++||||...+. ++|.++|++||+++++|++|......
T Consensus 115 ~~~~v~~--~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~-- 184 (373)
T cd06453 115 KLKVVPV--DDDGQLDLEALEKLLT---ERTKLVAVTHVSNVLGTINPV---KEIGEIAHEAGVPVLVDGAQSAGHMP-- 184 (373)
T ss_pred EEEEeec--CCCCCcCHHHHHHHhc---CCceEEEEeCcccccCCcCCH---HHHHHHHHHcCCEEEEEhhhhcCcee--
Confidence 9999987 3456799999999997 578999999999999999875 58999999999999999997532211
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhc--------------------
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARA-------------------- 305 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~-------------------- 305 (435)
.++ ......+++.|++|.++. .++||+++ +++ +++.+......
T Consensus 185 ----~~~----~~~~~d~~~~s~~K~~~~--~g~g~~~~---~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 247 (373)
T cd06453 185 ----VDV----QDLGCDFLAFSGHKMLGP--TGIGVLYG---KEE----LLEEMPPYGGGGEMIEEVSFEETTYADLPHK 247 (373)
T ss_pred ----eec----cccCCCEEEeccccccCC--CCcEEEEE---chH----HhhcCCCeecCCCccccccccccccCCCccc
Confidence 011 111235677889999985 56899864 777 65555432210
Q ss_pred -cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc---cCcceeEec--CCCH
Q 013839 306 -MYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT---NQLGMFCFS--GLTP 379 (435)
Q Consensus 306 -~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~g~~~~~--~~~~ 379 (435)
...+++.....++..++.... +...+..+++.+++++++.+.|++++. +.... ..++++.+. +.+.
T Consensus 248 ~~~~t~~~~~~~al~~al~~l~-----~~g~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 319 (373)
T cd06453 248 FEAGTPNIAGAIGLGAAIDYLE-----KIGMEAIAAHEHELTAYALERLSEIPG---VRVYGDAEDRAGVVSFNLEGIHP 319 (373)
T ss_pred cCCCCCCHHHHHHHHHHHHHHH-----HcCHHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCccccCCeEEEEECCcCH
Confidence 011334344444444443211 123466777788888899999988742 23322 234433332 3455
Q ss_pred HHHHHHhhhccEEEeCC--------------C--cEEecc-CCCCcHHHHHHHH
Q 013839 380 YQVDRLAKEFHIYMTQD--------------G--RISMAG-VTTGNVNYLANAI 416 (435)
Q Consensus 380 ~~~~~ll~~~gI~i~pg--------------g--Ris~~~-~~~e~i~~~~~~l 416 (435)
+.+.+.|+++||.+.+| + |++++. .++++++++++.|
T Consensus 320 ~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 320 HDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 55544556789998643 2 999863 2788899888764
No 164
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.91 E-value=5.7e-22 Score=195.34 Aligned_cols=345 Identities=11% Similarity=0.036 Sum_probs=212.5
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..+|+..|.....-| ..++...+.+.+++... .+.+.+..+.+.. .++++++......+. .+++. ++++|
T Consensus 38 ~dG~~~lD~~~g~~~~~lG-h~~~~i~~a~~~~~~~~-~~~~~~~~~~~~~-~~la~~l~~~~~~~~-~~~~~--f~~sG 111 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKL-SHTCFQVLAYEPY-LELCEKMNQKVPGDF-AKKTL--LVTTG 111 (425)
T ss_pred CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHhhC-CCccccccCCHHH-HHHHHHHHHhCCCCC-CCEEE--EeCCc
Confidence 3677899998875311112 12334444444454432 1222222223333 366666633211100 13566 78999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeee----------------eeecCCCCCCcC----hHhHH
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERT----------------YHYYDPDSKSLD----FAALM 186 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----------------v~~~~~~~~~~d----~e~l~ 186 (435)
++|++.++.+...+....+|+..+++|.+....+...+..... +|. +.+ +.+ ++.++
T Consensus 112 sea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~--~~~~~~~~~~l~ 188 (425)
T PRK08088 112 SEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPC-PLH--GVSEDDAIASIE 188 (425)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCc-ccc--CccHHHHHHHHH
Confidence 9999988755544444466777799998886554443322110 121 111 122 45677
Q ss_pred HHhhc--CCCCcEEEEe-CCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 187 DDIKN--APDSSFFLLH-PSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 187 ~~i~~--~~~~~~~v~~-~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
+.+.+ .+++..++++ +..+|++....+.+.+++|.++|++|++++|+||+|.++...+ ...++... +.+.
T Consensus 189 ~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g---~~~~~~~~----~~~p 261 (425)
T PRK08088 189 RIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTG---TLFAMEQM----GVAA 261 (425)
T ss_pred HHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhHHhhc----CCCC
Confidence 77752 2234455554 5567887788899999999999999999999999999876543 12222111 2234
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
-+.||||.++ +|+|+||+++ +++ +++.+.......+.+.+.+.|.++..+|+... ..++++..++..+
T Consensus 262 di~s~sK~l~-~G~rig~v~~---~~~----~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~ 329 (425)
T PRK08088 262 DLTTFAKSIA-GGFPLAGVTG---RAE----VMDAIAPGGLGGTYAGNPIACAAALAVLKVFE----QENLLQKANALGE 329 (425)
T ss_pred CEEEEecccc-CCCcceeeEe---cHH----HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHH----hcCHHHHHHHHHH
Confidence 4789999999 9999999974 888 77777665556677788999999999987542 1244555555544
Q ss_pred HHHHHHHHHHHhhCCCCCccccccCcceeEecCC---------C---HHHHHHHhhhccEEEeCCC------cEEec-cC
Q 013839 344 RKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL---------T---PYQVDRLAKEFHIYMTQDG------RISMA-GV 404 (435)
Q Consensus 344 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~---------~---~~~~~~ll~~~gI~i~pgg------Ris~~-~~ 404 (435)
+.++.+.+.+...+. +...... |+++|+.+ + ...+...+.+.||.+.|++ |++++ ..
T Consensus 330 ~~~~~l~~l~~~~~~---~~~v~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~ 405 (425)
T PRK08088 330 KLKDGLLAIAEKHPE---IGDVRGL-GAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTI 405 (425)
T ss_pred HHHHHHHHHHHhCCC---eEEEecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCc
Confidence 444555444444432 2222223 77888865 1 2233333346899888753 99987 35
Q ss_pred CCCcHHHHHHHHHHHHHhh
Q 013839 405 TTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 405 ~~e~i~~~~~~l~~~l~~~ 423 (435)
++++|++++++|+++++..
T Consensus 406 t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 406 EDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 7899999999999998653
No 165
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=1e-21 Score=190.95 Aligned_cols=330 Identities=12% Similarity=0.061 Sum_probs=214.7
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
++...||+..|.-. .+....+++++++.+++... ..+++ .-..++++++++.+.+.. ...+. ++++|+
T Consensus 27 dg~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~~~--~~~~~-~~~~~~~~~la~~l~~~~-----~~~~~--~~~SGs 94 (375)
T PRK04260 27 DGKKYLDFSSGIGV--TNLGFHPQVQQALQKQAGLI--WHSPN-LYLNSLQEEVAQKLIGDK-----DYLAF--FCNSGA 94 (375)
T ss_pred CCCEEEECCCCccc--ccCCCCHHHHHHHHHHHHhc--CcccC-ccCCHHHHHHHHHHhcCc-----CCEEE--EcCccH
Confidence 56788999877410 11122334444445554321 11222 234678899998874421 11234 789999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCChhhH-HHHhhCCCC---------eeeeeecCCCCCCcChHhHHHHhhcCCCCcE
Q 013839 128 GACRLFAEFQRRFHPESHIYFPDPTWSNHH-NIWRDAQIP---------ERTYHYYDPDSKSLDFAALMDDIKNAPDSSF 197 (435)
Q Consensus 128 ~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~-~~~~~~g~~---------~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 197 (435)
+|+..+..+.....++++|++.+.+|.+.. ..+...|.+ +..++.. . -.|++.+++.+. ++..
T Consensus 95 eA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~dl~~l~~~l~---~~~a 167 (375)
T PRK04260 95 EANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA-I---FNDLNSVKALVN---KNTA 167 (375)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe-C---CCCHHHHHHhcC---CCeE
Confidence 999988655444456688999999887643 222222211 1111110 0 137889988885 5678
Q ss_pred EEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccC
Q 013839 198 FLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYG 276 (435)
Q Consensus 198 ~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G 276 (435)
++++.+++|++|... +.+.++++.++|+++|+++|+||+|.++...+ ..++.... +.... +.||||.++ +|
T Consensus 168 ~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g---~~~~~~~~-~~~pd---i~t~sK~l~-~G 239 (375)
T PRK04260 168 AVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG---KLYAFEHY-GIEPD---IFTLAKGLA-NG 239 (375)
T ss_pred EEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhhHhh-CCCCC---EEEeccccc-CC
Confidence 999999999999975 46779999999999999999999998776543 12222122 22222 348999998 89
Q ss_pred CcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013839 277 HRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL 356 (435)
Q Consensus 277 ~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 356 (435)
+|+||+++ +++ +.+.+.......+.+.+.+.+.++.+.|+... ..+..++.++..+..++.+.+.+.+.
T Consensus 240 ~~ig~~~~---~~~----~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~ 308 (375)
T PRK04260 240 VPVGAMLA---KSS----LGGAFGYGSHGSTFGGNKLSMAAASATLDIML----TAGFLEQALENGNYLQEQLQKALQDK 308 (375)
T ss_pred cceEEEEE---cHH----HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999975 777 77766543344556678888888888886432 12445666666777777777666655
Q ss_pred CCCCCccccccCcceeEecCC--CHHHHHHHhhhccEEEeCCC----cEEe-ccCCCCcHHHHHHHHHHH
Q 013839 357 GSSLNWEHITNQLGMFCFSGL--TPYQVDRLAKEFHIYMTQDG----RISM-AGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~~~~--~~~~~~~ll~~~gI~i~pgg----Ris~-~~~~~e~i~~~~~~l~~~ 419 (435)
+. +.... ..|+++|+.+ +.+.+.+.+.++||.+.|.+ |+++ ...+++++++++++|+++
T Consensus 309 ~~---~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 309 ET---VTTVR-GLGYMIGIETTADLSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred CC---eeEEe-ccceEEEEEecCcHHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 32 22222 3688898865 34445444467899998875 8887 556899999999998765
No 166
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.91 E-value=1.2e-21 Score=191.67 Aligned_cols=328 Identities=12% Similarity=0.107 Sum_probs=205.9
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCC-CCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFL-ESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.+++..+|+..|.....-| ...+++++++.+++...... .+.......+|.+.++++. + .+.+. ++++
T Consensus 37 ~~G~~~lD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~--~~~S 105 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQG-HRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT-G-------KDMVL--PMNT 105 (396)
T ss_pred CCCCEEEEcCCCHHhccCC-CCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC-C-------CCeEE--EcCC
Confidence 3667889987774211111 11233334444444321111 0111122234555555543 2 13556 8999
Q ss_pred chhHHHHHHHHHHHh-------CCC-CEEEEcCCCChhhHH-HHhhCCCC------------eeeeeecCCCCCCcChHh
Q 013839 126 GTGACRLFAEFQRRF-------HPE-SHIYFPDPTWSNHHN-IWRDAQIP------------ERTYHYYDPDSKSLDFAA 184 (435)
Q Consensus 126 g~~a~~~~~~~~~~~-------~~g-d~Vlv~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~~~d~e~ 184 (435)
|++|++.+..+.... .+| ++|+..+-+|.+... .+...+.. +..++. .|++.
T Consensus 106 GseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 178 (396)
T PRK04073 106 GAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEA 178 (396)
T ss_pred hHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHH
Confidence 999999886544332 134 778888877766542 22222211 111111 27889
Q ss_pred HHHHhhcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 185 LMDDIKNAPDSSFFLLHPSAHNPTGVDPTEE-QWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 185 l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
+++.+. ++++++++++++||||..++.+ .+++|.++|++||+++|+||+|.++...+ ..... ...+...+
T Consensus 179 l~~~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g---~~~~~-~~~~~~pd-- 249 (396)
T PRK04073 179 LKAAIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG---KLFAC-DWDNVTPD-- 249 (396)
T ss_pred HHHhcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc---HHHHh-hhcCCCCC--
Confidence 988886 5789999999999999998765 69999999999999999999999887643 11121 11122122
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
+.++||.+|.+|+|+||+++ +++ +++.+.......+.+.+.+++.++.+.|+... + ....++.+
T Consensus 250 -i~~~sK~lg~gg~~ig~~~~---~~~----i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~------~--~~l~~~~~ 313 (396)
T PRK04073 250 -MYILGKALGGGVFPISCVAA---NRD----ILGVFTPGSHGSTFGGNPLACAVSIAALEVLE------E--EKLPERSL 313 (396)
T ss_pred -EEEecccccCCCCcceEEEE---cHH----HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH------h--cCHHHHHH
Confidence 33579999988899999974 777 77777654444566778888888888875321 1 23445667
Q ss_pred HHHHHHHHHHHhhCCCCCccccccCcceeEecCC--CHH-HHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHHH
Q 013839 344 RKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL--TPY-QVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLANA 415 (435)
Q Consensus 344 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~-~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~~ 415 (435)
++++++.+.|++++.+ .+....+. |.|+++.+ +.+ +..++ .++||.+.+.+ ||++. ..+++++++++++
T Consensus 314 ~~~~~l~~~L~~l~~~-~i~~~~~~-g~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~ 390 (396)
T PRK04073 314 ELGEYFKEQLKEIDNP-MIKEVRGR-GLFIGVELNEPARPYCEAL-KEEGLLCKETHETVIRFAPPLVITKEELDWAFEK 390 (396)
T ss_pred HHHHHHHHHHHhhcCC-cccceecc-eEEEEEEecchHHHHHHHH-HHCCeEEecCCCCEEEEECCcccCHHHHHHHHHH
Confidence 7788888888877532 23333444 45666655 233 44555 56899998754 88842 2389999999999
Q ss_pred HHHHH
Q 013839 416 IHEVT 420 (435)
Q Consensus 416 l~~~l 420 (435)
|++++
T Consensus 391 l~~~l 395 (396)
T PRK04073 391 IKAVL 395 (396)
T ss_pred HHHHh
Confidence 98765
No 167
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.90 E-value=9.7e-22 Score=192.68 Aligned_cols=339 Identities=11% Similarity=0.042 Sum_probs=213.7
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC--CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS--EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.++...+|+..|.....-|.. .+++++++.+++... ....|.. ....+|.+.+++.. + .+++. +++
T Consensus 36 ~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~-~-------~~~v~--~~~ 103 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT-F-------ADRVF--FCN 103 (406)
T ss_pred CCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC-C-------CCeEE--EcC
Confidence 356789999886321222323 334455555555321 1111211 12234555555543 1 24677 899
Q ss_pred CchhHHHHHHHHHHHhC------CCCEEEEcCCCChhhHHHHhhCCCCeee----eeecC--CCCCCcChHhHHHHhhcC
Q 013839 125 SGTGACRLFAEFQRRFH------PESHIYFPDPTWSNHHNIWRDAQIPERT----YHYYD--PDSKSLDFAALMDDIKNA 192 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----v~~~~--~~~~~~d~e~l~~~i~~~ 192 (435)
+|++|++.+..+..... +..+|+..+.+|.+........+..... .++.. ......|++.+++.+.
T Consensus 104 sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-- 181 (406)
T PRK12381 104 SGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID-- 181 (406)
T ss_pred CcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc--
Confidence 99999999975544331 3478999999998876433322221100 01100 0001247889998886
Q ss_pred CCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccc
Q 013839 193 PDSSFFLLHPSAHNPTGVDP--TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAK 270 (435)
Q Consensus 193 ~~~~~~v~~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK 270 (435)
++++++++ .|.||+|-+. +.+.+++|.++|++||+++|+||+|.+++..+ ..+....+ +.... +.|+||
T Consensus 182 -~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G---~~~~~~~~-~v~pD---i~t~sK 252 (406)
T PRK12381 182 -DQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMHY-GVTPD---VLTTAK 252 (406)
T ss_pred -CCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc---chhhhHhh-CCCCC---EEEehh
Confidence 56777777 6899997654 68999999999999999999999998886654 12222222 11111 358999
Q ss_pred cccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 271 SMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLR 350 (435)
Q Consensus 271 ~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 350 (435)
.++ +|+|+||+++ +++ +++.+.......+.+.+++.+.++.+.|+.- .....+++++++.+++.
T Consensus 253 ~l~-gG~~ig~~~~---~~~----~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l--------~~~~~~~~~~~~~~~l~ 316 (406)
T PRK12381 253 ALG-GGFPIGAMLT---TEK----CASVMTVGTHGTTYGGNPLASAVAGKVLELI--------NTPEMLNGVKQRHDWFV 316 (406)
T ss_pred hhh-CCCceEEEEE---cHH----HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH--------hhccHHHHHHHHHHHHH
Confidence 999 8999999974 777 7777765444455677888888888876421 12246778888888888
Q ss_pred HHHHhhCCCCCccccccCcceeEecCCC------HHHHHHHhhhccEEEeCCC----cEEecc-CCCCcHHHHHHHHHHH
Q 013839 351 QNLEKLGSSLNWEHITNQLGMFCFSGLT------PYQVDRLAKEFHIYMTQDG----RISMAG-VTTGNVNYLANAIHEV 419 (435)
Q Consensus 351 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~ll~~~gI~i~pgg----Ris~~~-~~~e~i~~~~~~l~~~ 419 (435)
+.|++++....+.......|++.++.+. ...+...+.++||.+.+.| ||+++. .+++++++++++|.++
T Consensus 317 ~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~ 396 (406)
T PRK12381 317 ERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFARA 396 (406)
T ss_pred HHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 8888764211111112234666666442 2344445567899998754 887753 5899999999999999
Q ss_pred HHhhh
Q 013839 420 TRSEQ 424 (435)
Q Consensus 420 l~~~~ 424 (435)
++++.
T Consensus 397 l~~~~ 401 (406)
T PRK12381 397 CERFV 401 (406)
T ss_pred HHHHH
Confidence 87654
No 168
>PRK06460 hypothetical protein; Provisional
Probab=99.90 E-value=2.5e-21 Score=187.18 Aligned_cols=214 Identities=15% Similarity=0.059 Sum_probs=150.9
Q ss_pred CcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCC----hhhHHHHhhCCCC
Q 013839 91 ASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTW----SNHHNIWRDAQIP 166 (435)
Q Consensus 91 ~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y----~~~~~~~~~~g~~ 166 (435)
.....+|+++++++.... ..+ ++.+|++|+..+ +.+++++||+|+++.|.| ..+...++..|++
T Consensus 44 ~p~~~~L~~~lA~l~g~~-------~~v---~~~sG~~ai~~~--l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~ 111 (376)
T PRK06460 44 NPTVLELTKKIVELENAE-------MGV---AFSSGMGAISTT--ALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVN 111 (376)
T ss_pred CccHHHHHHHHHHHhCCC-------cEE---EeCCHHHHHHHH--HHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence 456789999999998432 133 467778888877 677789999999997654 4455667788988
Q ss_pred eeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCc
Q 013839 167 ERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLD 246 (435)
Q Consensus 167 ~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~ 246 (435)
+..++.. +.+.+++.+. ++++++++++|+||||.+++.+ +|.++|+++|+++|+|++|......
T Consensus 112 v~~~~~~-------~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~~--- 175 (376)
T PRK06460 112 VDASNPG-------SDNIIEKAKS---KRYDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPINQ--- 175 (376)
T ss_pred EEEECCC-------CHHHHHHhcC---CCceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCccccC---
Confidence 8777641 1233444333 5789999999999999999876 7888999999999999998653211
Q ss_pred ccHHHHHHhhhcCCeEEEEeccccccccc-CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCCh
Q 013839 247 KDAQAIRIFLEDEHLIGCAQSYAKSMGLY-GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDP 325 (435)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~~s~SK~~g~~-G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 325 (435)
. +. . .+.++++.|+||.++-. |.|+||+++ +++ +++.+++.......+.+.. .+..++...
T Consensus 176 -~--~l----~-~~~divv~S~sK~l~G~~~~~~G~~~~---~~~----l~~~l~~~~~~~g~~~~~~---~a~~~l~~~ 237 (376)
T PRK06460 176 -K--PL----E-LGADIVVHSASKFLAGHNDVIAGLAAG---YGK----LLNVIDQMRRTLGTSLDPH---AAYLTLRGI 237 (376)
T ss_pred -C--hh----h-cCCCEEEeecceeccCCCCceEEEEec---CHH----HHHHHHHHHHhcCCCCCHH---HHHHHHhch
Confidence 0 11 1 13569999999998522 367999863 788 7777776655444444433 233333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 326 NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.++..+++..++++.+.+.|++.+
T Consensus 238 -------~~l~~r~~~~~~n~~~l~~~L~~~p 262 (376)
T PRK06460 238 -------KTLKIRMDVINRNAEQIAEFLEGHP 262 (376)
T ss_pred -------hhHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4566777888899999999998764
No 169
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.90 E-value=3.5e-21 Score=185.87 Aligned_cols=271 Identities=14% Similarity=0.122 Sum_probs=189.4
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH----HHHhhCCCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH----NIWRDAQIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~ 167 (435)
....+|.+.++++..... . + .++||++|+.++ + .++.+||+|++++|+|+... ..++..|+++
T Consensus 52 pt~~~le~~la~l~g~~~-------~-~--~~~sG~~ai~~~--~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v 118 (366)
T PRK08247 52 PTRGVLEQAIADLEGGDQ-------G-F--ACSSGMAAIQLV--M-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRF 118 (366)
T ss_pred chHHHHHHHHHHHhCCCc-------E-E--EEcCHHHHHHHH--H-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceE
Confidence 346789999999974321 2 2 588999998765 3 56789999999999998743 3445688888
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. .|++.+++++. ++++++++++|+||+| +..++++|+++|++||+++|+|++|.......
T Consensus 119 ~~vd~-------~d~~~l~~~i~---~~tklv~le~P~NP~~---~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~--- 182 (366)
T PRK08247 119 VYVNT-------ASLKAIEQAIT---PNTKAIFIETPTNPLM---QETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR--- 182 (366)
T ss_pred EEECC-------CCHHHHHHhcc---cCceEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCccccccC---
Confidence 87754 37899999887 6789999999999975 57889999999999999999999984322111
Q ss_pred cHHHHHHhhhcCCeEEEEeccccccccc-CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLY-GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~-G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
++ ....++++.|+||.++-+ +.+.||++ +++++ +.+.+...+......++.+.+.++...++.
T Consensus 183 ---p~-----~~g~di~i~S~sK~~~g~~d~~~G~iv--~~~~~----l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t-- 246 (366)
T PRK08247 183 ---PL-----EEGADIVIHSATKYLGGHNDVLAGLVV--AKGQE----LCERLAYYQNAAGAVLSPFDSWLLIRGMKT-- 246 (366)
T ss_pred ---ch-----hcCCcEEEeecceeccCCCceeeeEEe--cChHH----HHHHHHHHHHhcCCCCChHHHHHHHhccCc--
Confidence 11 124579999999998643 45889885 32356 666666655555556667777766665543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc-c-cccCcceeEecCC-CHHHHHHHhh-------------hcc
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWE-H-ITNQLGMFCFSGL-TPYQVDRLAK-------------EFH 390 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~-~~~~~g~~~~~~~-~~~~~~~ll~-------------~~g 390 (435)
+....++.+++++.+.+.|++++. +. + .++.+|+|.|. + ..+...++++ ...
T Consensus 247 --------l~~r~~~~~~~a~~l~~~L~~~p~---v~~v~~P~~gg~~sf~-~~~~~~~~~~~~~l~~~~~~~slg~~~s 314 (366)
T PRK08247 247 --------LALRMRQHEENAKAIAAFLNEQPG---VTDVLYPGRGGMLSFR-LQDEEWVNPFLKSLKLITFAESLGGVES 314 (366)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHhCCC---eeEEecCCcCcEEEEE-ECCHHHHHHHHHcCCcceEccCCCCCce
Confidence 233445678888999999988742 32 2 44489999984 4 2332333322 123
Q ss_pred EEEeCC---------------C------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 391 IYMTQD---------------G------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 391 I~i~pg---------------g------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
+.+.|+ | |+|++- |+.+.+++.|.++++.
T Consensus 315 l~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 315 FITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred EEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 343343 1 888754 7888888888888764
No 170
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=8.1e-22 Score=189.85 Aligned_cols=301 Identities=14% Similarity=0.034 Sum_probs=200.3
Q ss_pred cccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhC-----
Q 013839 67 PVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFH----- 141 (435)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~----- 141 (435)
+.++..+.+.+....+.....|....+..++++++++++...-+.+..++++. +|.||++|+.++. .++..
T Consensus 9 ~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~--~t~ggt~a~~~al--~~~~~~~~~~ 84 (345)
T cd06450 9 MDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGV--FTSGGSESNLLAL--LAARDRARKR 84 (345)
T ss_pred CcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEE--EeCChhHHHHHHH--HHHHHHhhhh
Confidence 34445555566655544345588888999999999888732211111134666 8999999998884 33221
Q ss_pred -------CC--CEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhc---CCCCcEEEEeCCCCCCCC
Q 013839 142 -------PE--SHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKN---APDSSFFLLHPSAHNPTG 209 (435)
Q Consensus 142 -------~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~v~~~~p~NPtG 209 (435)
+| ++|++++++|..+...+...|.+++.+++ ++ ++.+|+++|++++.+ ...+++++++++|+||||
T Consensus 85 ~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG 162 (345)
T cd06450 85 LKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPV-DE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTG 162 (345)
T ss_pred hhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeee-CC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCC
Confidence 23 47888999999988888888999999988 33 458999999999973 112678888999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecCh
Q 013839 210 VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS 289 (435)
Q Consensus 210 ~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~ 289 (435)
... ++++|+++|+++|+++++|++|..+.... + ..... .....+-+.+..|++|.++ ++.++|++.
T Consensus 163 ~~~---~~~~i~~~~~~~~~~l~vD~a~~~~~~~~-~--~~~~~-~~~~~~~d~~~~s~~K~l~-~p~g~g~~~------ 228 (345)
T cd06450 163 AID---PLEEIADLAEKYDLWLHVDAAYGGFLLPF-P--EPRHL-DFGIERVDSISVDPHKYGL-VPLGCSAVL------ 228 (345)
T ss_pred CCC---CHHHHHHHHHHhCCeEEEechhhHHHhhC-h--hhHHH-hcCccccCEEEEchhHhhC-CCcchHHHH------
Confidence 974 56799999999999999999987766431 1 11110 1111233456779999765 667788773
Q ss_pred hHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc-ccC
Q 013839 290 KQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI-TNQ 368 (435)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~ 368 (435)
.+ .+.+.++...+.. ...++.+++..++++++.+.|++++. +... +++
T Consensus 229 ------~~--------------~~~~~~~l~~l~~--------~g~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~ 277 (345)
T cd06450 229 ------VR--------------ALKLWATLRRFGR--------DGYGEHIDRIVDLAKYLAELIRADPG---FELLGEPN 277 (345)
T ss_pred ------HH--------------HHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHHhcCCC---eEEecCCc
Confidence 11 3444444444432 34566777888888999999988752 3333 345
Q ss_pred cceeEec--C-----CCHHHHHHHhhhccEEEeCC------C--cEEeccC--CCCcHHHHHHHHHH
Q 013839 369 LGMFCFS--G-----LTPYQVDRLAKEFHIYMTQD------G--RISMAGV--TTGNVNYLANAIHE 418 (435)
Q Consensus 369 ~g~~~~~--~-----~~~~~~~~ll~~~gI~i~pg------g--Ris~~~~--~~e~i~~~~~~l~~ 418 (435)
.+++.|. + .+...+.+.|.++|+.+.++ + |+++... +.+++++++++|++
T Consensus 278 ~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 278 LSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred eeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 6666554 2 22334444445665444332 1 9998642 77889999998865
No 171
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=6.7e-21 Score=185.16 Aligned_cols=214 Identities=12% Similarity=0.055 Sum_probs=155.9
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH----HhhCCCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI----WRDAQIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~ 167 (435)
.-..+|++.++++..+. ..+ ++++|++|+.++ +.+++.+||+|+++.|+|.+.... +...|+++
T Consensus 64 p~~~~le~~lA~l~g~~--------~~i--~~ssG~~Ai~~~--l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v 131 (398)
T PRK08249 64 PTVQAFEEKVRILEGAE--------AAT--AFSTGMAAISNT--LYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDV 131 (398)
T ss_pred hHHHHHHHHHHHHhCCC--------eEE--EeCChHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEE
Confidence 44578999999987432 233 688889998888 777789999999999999876443 44677777
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. .|++.++++++ +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 132 ~~vd~-------~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~--- 195 (398)
T PRK08249 132 TLCET-------GDHEQIEAEIA---KGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN--- 195 (398)
T ss_pred EEcCC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC---
Confidence 66542 58899999997 67899999999999999987 5588999999999999999987544321
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNL 327 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l 327 (435)
+.. ....+++.|+||.++.+|.++|++++ + +++ ++++++..........+.+.++.+...+
T Consensus 196 ---~l~-----~~~Divv~S~sK~l~g~~~~~gG~vv-~-~~~----l~~~l~~~~~~~g~~~s~~~a~l~l~~l----- 256 (398)
T PRK08249 196 ---PLA-----LGADLVIHSATKFLSGHADALGGVVC-G-SKE----LMEQVYHYREINGATMDPMSAYLILRGM----- 256 (398)
T ss_pred ---chh-----hCCCEEeccCceecCCCCCceEEEEE-C-CHH----HHHHHHHHHHhcCCCCCHHHHHHHHhCc-----
Confidence 111 12347889999999877888755432 3 777 7777776655555556666555544443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 328 KSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.+....++..++++.+.+.|++++
T Consensus 257 -----~tL~~R~~~~~~na~~la~~L~~~p 281 (398)
T PRK08249 257 -----KTLKLRVRQQQESAMALAKYLQTHP 281 (398)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3344555667778888888888765
No 172
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.89 E-value=1.1e-20 Score=183.94 Aligned_cols=213 Identities=12% Similarity=0.052 Sum_probs=150.0
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHH----hhCCCCee
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIW----RDAQIPER 168 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~ 168 (435)
-...|++.+++++... ... ++.+|+.|+..+ +..++.+||+|+++.|.|..+...+ ...|++++
T Consensus 66 ~~~~Le~~lA~l~G~~--------~~~--~~~sG~~Ai~~~--l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~ 133 (398)
T PRK07504 66 TVDMFEKRMCALEGAE--------DAR--ATASGMAAVTAA--ILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIEST 133 (398)
T ss_pred hHHHHHHHHHHHhCCC--------eee--EecCHHHHHHHH--HHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEE
Confidence 4678999999987332 122 477888888766 6667899999999999998765543 35677776
Q ss_pred eeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCccc
Q 013839 169 TYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKD 248 (435)
Q Consensus 169 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~ 248 (435)
.++ .+|+++++++++ +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+..
T Consensus 134 ~vd-------~~d~e~l~~ai~---~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~---- 196 (398)
T PRK07504 134 LVD-------GLDLDNWEKAVR---PNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK---- 196 (398)
T ss_pred EEC-------CCCHHHHHHhcC---cCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC----
Confidence 663 268999999987 68899999999999999887 5688899999999999999987544321
Q ss_pred HHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHH-HHHHHhhccccCCChhHHHHHHHHhCChhh
Q 013839 249 AQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRS-QIQQIARAMYGSPPVHGILLVATILSDPNL 327 (435)
Q Consensus 249 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l 327 (435)
+. + .+.++++.|+||.++.+|+|+|++++ + +++ .+. .++...+.....++.+.+..+...|
T Consensus 197 --~~----~-~gaDivv~S~sK~l~g~g~~~GG~vv-~-~~~----~i~~~~~~~~~~~g~~~s~~~A~~~l~~L----- 258 (398)
T PRK07504 197 --PL----E-LGAHIVVYSATKHIDGQGRCLGGVVL-S-DKA----WIEEHLQDYFRHTGPSLSPFNAWTLLKGL----- 258 (398)
T ss_pred --ch----h-hCCCEEEeeccccccCCccceEEEEE-e-CcH----HHHHHHHHHHHHhCCCCCHHHHHHHHhcc-----
Confidence 11 1 13467899999999989999976552 4 555 332 3443333333444544444333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 328 KSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.+....++..++...+.+.|++++
T Consensus 259 -----~tl~~R~~~~~~na~~la~~L~~~p 283 (398)
T PRK07504 259 -----ETLPVRVRQQTESAAAIADFLAGHP 283 (398)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3344555556677777788887764
No 173
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.89 E-value=6.2e-21 Score=186.01 Aligned_cols=287 Identities=16% Similarity=0.116 Sum_probs=190.5
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH---hCCCCEEEEcCCCChhhHH---HHhhCCCCe
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR---FHPESHIYFPDPTWSNHHN---IWRDAQIPE 167 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~---~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~ 167 (435)
..++|+.+++++ +.. ++++. ++.|+++++.+++ ..+ ..+||+|++....|+.+.. .++..|+++
T Consensus 44 ~~~~r~~la~~~-g~~-----~~~i~--~t~~~t~a~~~al--~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v 113 (379)
T TIGR03402 44 VEEAREQVAKLL-GAE-----PDEII--FTSGGTESDNTAI--KSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKV 113 (379)
T ss_pred HHHHHHHHHHHh-CCC-----CCeEE--EeCcHHHHHHHHH--HHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEE
Confidence 457778888887 332 45787 8999999998873 333 2457899998888876644 344569999
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. ++++.+|++++++.++ ++++++++++++||||..++.+ +|.++|++||+++++|+++.. ...+.
T Consensus 114 ~~v~~--~~~g~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~~~---~I~~l~~~~g~~vivD~~~~~-g~~~~-- 182 (379)
T TIGR03402 114 TYLPV--DEEGRLDLEELRAAIT---DDTALVSVMWANNETGTIFPIE---EIGEIAKERGALFHTDAVQAV-GKIPI-- 182 (379)
T ss_pred EEEcc--CCCCcCCHHHHHHhcC---CCcEEEEEEcccCCeeecccHH---HHHHHHHHcCCEEEEECcccc-ccccc--
Confidence 99887 3346799999999997 6789999999999999999865 899999999999999999642 21111
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHH--H-HhhccccCCChhHHHHHHHHhCC
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQ--Q-IARAMYGSPPVHGILLVATILSD 324 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~--~-~~~~~~~~~~~~~q~~~~~~l~~ 324 (435)
++ ...+-++++.|.+|.+|.+| +|++.+ .++. .+...+. . .......+++.....++..+++.
T Consensus 183 ---~~----~~~~~D~~~~s~~K~~gp~G--~g~l~v---~~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~ 248 (379)
T TIGR03402 183 ---DL----KEMNIDMLSLSGHKLHGPKG--VGALYI---RKGT--RFRPLLRGGHQERGRRAGTENVPGIVGLGKAAEL 248 (379)
T ss_pred ---Cc----ccCCCCEEEEcHHHcCCCCc--eEEEEE---CCCC--CCCCcccCCccCCCcCCCCccHHHHHHHHHHHHH
Confidence 11 11234577788889887666 677753 3331 0110010 0 00011234444544555555532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCcccccc-----CcceeEe-cCCCHHHHHHHhhhccEEEeCC-
Q 013839 325 PNLKSLWIDEVKIMADRIQRKRTTLRQNLEK-LGSSLNWEHITN-----QLGMFCF-SGLTPYQVDRLAKEFHIYMTQD- 396 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~-----~~g~~~~-~~~~~~~~~~ll~~~gI~i~pg- 396 (435)
. .+.++...++++++++.+.+.|++ ++. +....+ .+.+.+| .+.+.+.+...|+++||.+.+|
T Consensus 249 ~------~~~~~~~~~~~~~l~~~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~ 319 (379)
T TIGR03402 249 A------TEHLEEENTRVRALRDRLEAGLLARIPD---ARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGS 319 (379)
T ss_pred H------HHhHHHHHHHHHHHHHHHHHHHHhhCCC---EEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchh
Confidence 2 134566667888888888888875 431 223221 1223333 3567766666667899998753
Q ss_pred ------------------------C--cEEeccC-CCCcHHHHHHHHHHHHHhhh
Q 013839 397 ------------------------G--RISMAGV-TTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 397 ------------------------g--Ris~~~~-~~e~i~~~~~~l~~~l~~~~ 424 (435)
| |+|+... +++|++++++.|+++++++.
T Consensus 320 ~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 320 ACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred hcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3 9998643 78999999999999987654
No 174
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.89 E-value=1.1e-20 Score=183.70 Aligned_cols=274 Identities=14% Similarity=0.081 Sum_probs=179.7
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh----CCCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD----AQIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~ 167 (435)
....+|.+.++++... ++.+ ++.+|+.|+..+ +.+++.+||+|+++.|.|......+.. .|+++
T Consensus 61 pt~~~Le~~lA~l~G~-------~~al---~~~sG~~Ai~~~--l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~ 128 (386)
T PRK06767 61 PTVKLFEERMAVLEGG-------EEAL---AFGSGMAAISAT--LIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITH 128 (386)
T ss_pred cchHHHHHHHHHHhCC-------CcEE---EECCHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEE
Confidence 3467899999999842 2233 578888888777 777789999999999999876655443 34333
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
..++ ..|++++++++. +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 129 ~~~~-------~~d~~~l~~~i~---~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~--- 192 (386)
T PRK06767 129 SFCD-------METEADIENKIR---PNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQR--- 192 (386)
T ss_pred EEeC-------CCCHHHHHHhhC---cCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 3332 247889998887 67899999999999999887 4688899999999999999985432221
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcc-cEEEEEecChhHHHHHHHHHHHHhh-ccccCCChhHHHHHHHHhCCh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRV-GCLSILCVDSKQAAAIRSQIQQIAR-AMYGSPPVHGILLVATILSDP 325 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~~~~~~l~~~ 325 (435)
++ . ...++++.|+||.++.+|.|+ ||++ + +++ ++..+.+..+ .....++.+.++++...|+.
T Consensus 193 ---pl----~-~g~Div~~S~sK~l~g~g~~~gG~v~--~-~~~----~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t- 256 (386)
T PRK06767 193 ---PL----E-LGCDAVVHSATKYIGGHGDVVAGVTI--C-KTR----ALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT- 256 (386)
T ss_pred ---ch----h-cCCcEEEecCcceecCCCCceeEEEE--e-ChH----HHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-
Confidence 11 1 123578899999999889986 7775 3 666 5554433222 22233455544444334432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc---------ccccCcceeEec-CCC---HHHHHHHhhhccEE
Q 013839 326 NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWE---------HITNQLGMFCFS-GLT---PYQVDRLAKEFHIY 392 (435)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~---------~~~~~~g~~~~~-~~~---~~~~~~ll~~~gI~ 392 (435)
+....++.+++...+.+.|++++.-..+. .....+|++.|. .-+ ...+.+.|+..++.
T Consensus 257 ---------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~ 327 (386)
T PRK06767 257 ---------LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIA 327 (386)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEe
Confidence 34455677888888899998875311111 111235655544 112 22233333556766
Q ss_pred EeCCC-------------------------------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 393 MTQDG-------------------------------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 393 i~pgg-------------------------------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
+.-|| |+|++- |+.+.+++-|.+++.
T Consensus 328 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~ 384 (386)
T PRK06767 328 VSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALK 384 (386)
T ss_pred cCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 65442 888754 678888888887775
No 175
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.89 E-value=2.1e-20 Score=183.61 Aligned_cols=329 Identities=12% Similarity=0.024 Sum_probs=204.8
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCC-CCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFL-ESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
++...+|+..|......| ...+.+++++.+++...... .+-......+|.+.++++. +. +++. ++++|
T Consensus 39 ~g~~~lD~~~~~~~~~~G-h~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~-------~~~~--~~~SG 107 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQG-HCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT-GS-------HKVL--PMNSG 107 (401)
T ss_pred CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC-CC-------CEEE--EeCCc
Confidence 567788887764211111 11333444444454422111 1112223445666666654 22 2555 89999
Q ss_pred hhHHHHHHHHHHHh-------CCC-CEEEEcCCCChhhHHHHhhCCCC-------------eeeeeecCCCCCCcChHhH
Q 013839 127 TGACRLFAEFQRRF-------HPE-SHIYFPDPTWSNHHNIWRDAQIP-------------ERTYHYYDPDSKSLDFAAL 185 (435)
Q Consensus 127 ~~a~~~~~~~~~~~-------~~g-d~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~e~l 185 (435)
++|++++..++... .+| ++|++.+-+|.+....+...+.. +..++ -.|+++|
T Consensus 108 s~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l 180 (401)
T PRK00854 108 AEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEAL 180 (401)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHH
Confidence 99999996444332 134 68888888886654333222211 11221 1378999
Q ss_pred HHHhhcCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEE
Q 013839 186 MDDIKNAPDSSFFLLHPSAHNPTGVDPTE-EQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGC 264 (435)
Q Consensus 186 ~~~i~~~~~~~~~v~~~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 264 (435)
++.+. +++++|++++|+||+|.++++ +.+++|.++|++||+++|+||+|.+++..+. .... ...+....++
T Consensus 181 e~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~---~~~~-~~~g~~~D~~- 252 (401)
T PRK00854 181 EAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK---LLAE-EHEGIEADVT- 252 (401)
T ss_pred HHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch---HhHH-hhcCCCCCEE-
Confidence 99887 678999999999999999974 4699999999999999999999987765431 1111 1112111222
Q ss_pred EecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 013839 265 AQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQR 344 (435)
Q Consensus 265 ~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~ 344 (435)
+ +||.++...+|+||+++ +++ +++.+.......+.+.+.+.+.++.+.|+... + ....+++++
T Consensus 253 ~--~~K~l~gg~~~ig~v~~---~~~----~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~------~--~~~~~~~~~ 315 (401)
T PRK00854 253 L--IGKALSGGFYPVSAVLS---NSE----VLGVLKPGQHGSTFGGNPLACAVARAALKVLT------E--EGMIENAAE 315 (401)
T ss_pred E--ecccccCCccCeEEEEE---cHH----HHhcccCCCCCCCCCcCHHHHHHHHHHHHHHH------H--cCHHHHHHH
Confidence 2 47999744479999964 777 77766544444455678888888888875321 1 235677888
Q ss_pred HHHHHHHHHHhhCCCCCccccccCcceeEec--C--CCH-HHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHH
Q 013839 345 KRTTLRQNLEKLGSSLNWEHITNQLGMFCFS--G--LTP-YQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLAN 414 (435)
Q Consensus 345 ~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~--~--~~~-~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~ 414 (435)
+.+++.+.|++++.+ .+....+.+.++.+. + .+. ++++.+ .++||.+.+.+ |+++. ..++++++++++
T Consensus 316 ~~~~l~~~L~~~~~~-~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L-~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~ 393 (401)
T PRK00854 316 MGAYFLEGLRSIRSN-IVREVRGRGLMLAVELEPEAGGARQYCEAL-KERGLLAKDTHDHTIRLAPPLVITREQVDWALE 393 (401)
T ss_pred HHHHHHHHHHhhccC-ceEEEeccceEEEEEEecCchhHHHHHHHH-HHCCeEEecCCCCEEEEeCCcccCHHHHHHHHH
Confidence 888899999887532 111224455555542 1 122 344555 45799998753 88863 348899999999
Q ss_pred HHHHHHH
Q 013839 415 AIHEVTR 421 (435)
Q Consensus 415 ~l~~~l~ 421 (435)
+|++++.
T Consensus 394 ~l~~~l~ 400 (401)
T PRK00854 394 QIAKVLA 400 (401)
T ss_pred HHHHHhh
Confidence 9998764
No 176
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.89 E-value=1.2e-20 Score=183.68 Aligned_cols=291 Identities=17% Similarity=0.135 Sum_probs=190.7
Q ss_pred HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHH-HH-hCCCCEEEEcCCCChhhHHHHhhCCCCeeeeee
Q 013839 95 TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQ-RR-FHPESHIYFPDPTWSNHHNIWRDAQIPERTYHY 172 (435)
Q Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~-~~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 172 (435)
.++++.+++++ +.. ++++. +++||++++..+.... .. ..+||+|++.++.|..+...++..|++++.++.
T Consensus 62 ~~~~~~la~~~-g~~-----~~~~~--~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~ 133 (371)
T PRK13520 62 EEAVEMLGELL-HLP-----DAYGY--ITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPL 133 (371)
T ss_pred HHHHHHHHHHh-CCC-----CCCeE--EecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecC
Confidence 46777777776 432 23555 7999999987773222 11 135799999999999998888889999999887
Q ss_pred cCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHH
Q 013839 173 YDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAI 252 (435)
Q Consensus 173 ~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~ 252 (435)
++++.+|+++|++++. ++++.+++..++||||...+ +++|.++|+++|+++++|++|..+...-. .....+
T Consensus 134 --~~~~~~d~~~l~~~i~---~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~-~~~~~~ 204 (371)
T PRK13520 134 --DDDYRVDVKAVEDLID---DNTIGIVGIAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFL-DDPPNF 204 (371)
T ss_pred --CCCCcCCHHHHHHHHh---hCCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhh-cCCCCc
Confidence 3456799999999997 55677777788999999876 66889999999999999999875542100 000000
Q ss_pred HHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc--------ccCCChhHHHHHHHHhCC
Q 013839 253 RIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM--------YGSPPVHGILLVATILSD 324 (435)
Q Consensus 253 ~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~q~~~~~~l~~ 324 (435)
.+ ....-..+..|..|. +++|.++|++++ .+++ +++.+....... ..+.+.....++..++..
T Consensus 205 -~~-~~~~vd~~~~s~~K~-~~a~~~~G~~~~--~~~~----~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~ 275 (371)
T PRK13520 205 -DF-SLPGVDSITIDPHKM-GLAPIPAGGILF--RDES----YLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKY 275 (371)
T ss_pred -cc-cCCCCceEEECCccc-cCccCCceEEEE--cCHH----HHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhh
Confidence 00 111223445577784 557789998863 3666 555443211110 011222334444445432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc-ccccCcceeEecCC-CHHHHHHHhhhccEEEeCCC-----
Q 013839 325 PNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWE-HITNQLGMFCFSGL-TPYQVDRLAKEFHIYMTQDG----- 397 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~g~~~~~~~-~~~~~~~ll~~~gI~i~pgg----- 397 (435)
-. .+..++.+++..++++++.+.|+++|+ . +..+..+++. +.+ +.+.+.+.|.++||.+.+++
T Consensus 276 l~-----~~g~~~~~~~~~~~~~~l~~~L~~~g~----~~~~~~~~~~v~-~~~~~~~~v~~~L~~~gi~v~~~~~~~~i 345 (371)
T PRK13520 276 LG-----REGYRKVVERCMENTRWLAEELKERGF----EPVIEPVLNIVA-FDDPNPDEVREKLRERGWRVSVTRCPEAL 345 (371)
T ss_pred hc-----HhHHHHHHHHHHHHHHHHHHHHHhCCC----EEecCCCceEEE-EecCCHHHHHHHHHHCCceeccCCCCCEE
Confidence 11 134567778888999999999988763 3 3445555433 333 45555545566799997752
Q ss_pred cEEecc-CCCCcHHHHHHHHHHHHH
Q 013839 398 RISMAG-VTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 398 Ris~~~-~~~e~i~~~~~~l~~~l~ 421 (435)
|+|+.. .++++++++++.|+++++
T Consensus 346 Ris~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 346 RIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHhh
Confidence 998743 378999999999988764
No 177
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=6.6e-21 Score=188.05 Aligned_cols=265 Identities=16% Similarity=0.215 Sum_probs=174.3
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH-----HHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcE
Q 013839 123 ALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN-----IWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSF 197 (435)
Q Consensus 123 t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~-----~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 197 (435)
+.+|+.|+..+ +.+++.+||+|+++.|+|..+.. .+...|++++.++. +.+++.+|++++++.+++ .+++
T Consensus 93 ~~sgt~al~~~--l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~~--~~~k 167 (416)
T PRK00011 93 PHSGSQANAAV--YFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV-DEETGLIDYDEVEKLALE--HKPK 167 (416)
T ss_pred cCCchHHHHHH--HHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCc-CcccCCcCHHHHHHHHHh--cCCC
Confidence 45678888777 66778999999999999976532 12344677777777 344578999999999973 2577
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCC-CccCCCCcccHHHHHHhhhcCCeEEEEecccccccccC
Q 013839 198 FLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQ-GFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYG 276 (435)
Q Consensus 198 ~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G 276 (435)
++++++++|| .. .++++|.++|++||+++|+|++|. ++.+.+. .... + + ..+++++|+||.+ +|
T Consensus 168 ~v~~~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~--~~~~---~-~--~~di~~~S~~K~l--~g 232 (416)
T PRK00011 168 LIIAGASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGV--HPSP---V-P--HADVVTTTTHKTL--RG 232 (416)
T ss_pred EEEECCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCc--cCCC---C-C--CCcEEEecCCcCC--CC
Confidence 8887666555 32 346799999999999999999964 2222110 0001 1 1 2357799999976 68
Q ss_pred CcccEEEEEecChhHHHHHHHHHHHHhhccccCCC-hhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013839 277 HRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPP-VHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEK 355 (435)
Q Consensus 277 ~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 355 (435)
+|.||++ +.+++ +++.+++.......+.+ ...+.++..++... ..+.+++.+++++++++++.+.|++
T Consensus 233 ~~gg~i~--~~~~~----~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~ 301 (416)
T PRK00011 233 PRGGLIL--TNDEE----LAKKINSAVFPGIQGGPLMHVIAAKAVAFKEA-----LEPEFKEYAQQVVKNAKALAEALAE 301 (416)
T ss_pred CCceEEE--eCCHH----HHHHHHHHhCccccCCccHHHHHHHHHHHHHH-----HhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 8999996 43467 77777665443222222 22222222222211 1234577888999999999999998
Q ss_pred hCCCCCccccc-cCcceeEecCC-----CHHHHHHHhhhccEEEeCC-------------C-cEEe-----ccCCCCcHH
Q 013839 356 LGSSLNWEHIT-NQLGMFCFSGL-----TPYQVDRLAKEFHIYMTQD-------------G-RISM-----AGVTTGNVN 410 (435)
Q Consensus 356 ~~~~~~~~~~~-~~~g~~~~~~~-----~~~~~~~ll~~~gI~i~pg-------------g-Ris~-----~~~~~e~i~ 410 (435)
+|. .+.. ...++++|+.+ +.+.+.+.|+++||.+..+ + |++. .++++++++
T Consensus 302 ~g~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~ 377 (416)
T PRK00011 302 RGF----RVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMK 377 (416)
T ss_pred CCC----eeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHH
Confidence 763 3332 12236777644 3455666667899999731 2 7743 134689999
Q ss_pred HHHHHHHHHHHh
Q 013839 411 YLANAIHEVTRS 422 (435)
Q Consensus 411 ~~~~~l~~~l~~ 422 (435)
++++.|++++..
T Consensus 378 ~l~~~l~~~~~~ 389 (416)
T PRK00011 378 EIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHHhc
Confidence 999999998765
No 178
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.89 E-value=2.7e-20 Score=180.11 Aligned_cols=217 Identities=14% Similarity=0.083 Sum_probs=154.3
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh-CCCCeeee
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD-AQIPERTY 170 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v 170 (435)
.-...|++.++++..+ ++++ +++||++|+.++ +.+++.+||+|+++.|+|.+....+.. .+...+.+
T Consensus 51 p~~~~le~~lA~l~g~--------~~v~--~~~gg~~Ai~~~--l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v 118 (382)
T TIGR02080 51 PTRDLLQQALAELEGG--------AGAV--VTNTGMSAIHLV--TTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRV 118 (382)
T ss_pred chHHHHHHHHHHHhCC--------CcEE--EEcCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEE
Confidence 3457899999998732 2555 899999999988 777789999999999999876554432 22222233
Q ss_pred eecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHH
Q 013839 171 HYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQ 250 (435)
Q Consensus 171 ~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~ 250 (435)
...+ ..|++.++++++ +++++|++++|+||||.+++. ++|+++|+++|+++|+|++|.......
T Consensus 119 ~~~d----~~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~dl---~~I~~la~~~g~~vvvD~a~~~~~~~~------ 182 (382)
T TIGR02080 119 LFVD----QGDEQALRAALA---QKPKLVLIETPSNPLLRVVDI---AKICHLAKAVGAVVVVDNTFLSPALQN------ 182 (382)
T ss_pred EEEC----CCCHHHHHHhcC---cCceEEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCcccccCC------
Confidence 3212 237899999987 578999999999999999875 588899999999999999996554321
Q ss_pred HHHHhhhcCCeEEEEeccccccc-ccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHH
Q 013839 251 AIRIFLEDEHLIGCAQSYAKSMG-LYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKS 329 (435)
Q Consensus 251 ~~~~~~~~~~~~i~~~s~SK~~g-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~ 329 (435)
++.. ...++++|+||.++ .+|++.|+++ +.+++ +++++..........++.+.+..+..-+
T Consensus 183 pl~~-----gaDivv~S~sK~l~G~~~~~~G~i~--~~~~~----~~~~l~~~~~~~g~~~sp~~a~l~lr~l------- 244 (382)
T TIGR02080 183 PLAL-----GADLVLHSCTKYLNGHSDVIAGAVI--AKDPQ----VAEELAWWANNLGVTGGAFDSYLTLRGL------- 244 (382)
T ss_pred chhh-----CCCEEEeecceeccCCCCceeEEEE--eCCHH----HHHHHHHHHHccCCCCCHHHHHHHHccc-------
Confidence 1211 12588899999885 5778899985 34667 6777766555555566666555443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 330 LWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.+....++..++...+.+.|+.++
T Consensus 245 ---~tl~~R~~~~~~na~~~a~~L~~~p 269 (382)
T TIGR02080 245 ---RTLVARMRLQQRNAQAIVEYLQTQP 269 (382)
T ss_pred ---chHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2344446667778888888888765
No 179
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.88 E-value=3.6e-20 Score=180.06 Aligned_cols=212 Identities=12% Similarity=0.078 Sum_probs=152.2
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH----HHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN----IWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 169 (435)
..++++.+++++... +++ +++||++|+.++ +.+++.+||+|+++.+.|.+... .+...|++++.
T Consensus 63 ~~~le~~la~l~g~~--------~~v--~~ssG~~Ai~~a--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~ 130 (390)
T PRK08133 63 VTMFQERLAALEGAE--------ACV--ATASGMAAILAV--VMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTF 130 (390)
T ss_pred HHHHHHHHHHHhCCC--------cEE--EECCHHHHHHHH--HHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEE
Confidence 568888888887322 344 799999999887 77778999999999998876544 45578988888
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++.. |+++++++++ +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 131 vd~~-------d~~~l~~~i~---~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~----- 192 (390)
T PRK08133 131 VDLT-------DLDAWRAAVR---PNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ----- 192 (390)
T ss_pred ECCC-------CHHHHHHhcC---cCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 8651 6888998887 67899999999999999875 5699999999999999999975443221
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKS 329 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~ 329 (435)
++ .. ...+++.|+||.++.+|+++|++++ + +++ +++.+....+.....++.+.+. .++...
T Consensus 193 -pl----~~-g~Divv~S~sK~~~g~g~~~GG~vv-~-~~~----~~~~~~~~~~~~g~~~~~~~a~---~~l~gl---- 253 (390)
T PRK08133 193 -PL----KL-GADVVIHSATKYLDGQGRVLGGAVV-G-SKE----LMEEVFGFLRTAGPTLSPFNAW---VFLKGL---- 253 (390)
T ss_pred -ch----hh-CCcEEEeecceeecCCcceEeEEEE-c-CHH----HHHHHHHHHHHhCCCCCHHHHH---HHHccc----
Confidence 11 11 2357899999999989999865542 4 666 5555554444333344444333 333321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 330 LWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.+....++..+++..+.+.|++.+
T Consensus 254 ---~tl~~R~~~~~~~a~~la~~L~~~p 278 (390)
T PRK08133 254 ---ETLSLRMEAHSANALALAEWLEAHP 278 (390)
T ss_pred ---chHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3445555667778888888888764
No 180
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=3.3e-20 Score=179.62 Aligned_cols=214 Identities=13% Similarity=0.065 Sum_probs=159.5
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh----hCCCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR----DAQIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~ 167 (435)
.....|++.++++..+ + +++ +++||++|+.++ +.+++.+||+|++++|+|++....+. ..|.++
T Consensus 52 pt~~~L~~~lA~l~g~-------~-~~i--~~~sg~~Ai~~~--l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v 119 (386)
T PRK08045 52 PTRDVVQRALAELEGG-------A-GAV--LTNTGMSAIHLV--TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRV 119 (386)
T ss_pred ccHHHHHHHHHHHhCC-------C-eEE--EECCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEE
Confidence 3467899999998732 1 355 799999999888 77788999999999999986544333 223344
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
..++ ..|++.+++++. ++++++++++|+||||.+++. ++|.++|+++|+++|+|++|.......
T Consensus 120 ~~vd-------~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~di---~~I~~ia~~~g~~vivDeay~~~~~~~--- 183 (386)
T PRK08045 120 LFVD-------QGDEQALRAALA---EKPKLVLVESPSNPLLRVVDI---AKICHLAREAGAVSVVDNTFLSPALQN--- 183 (386)
T ss_pred EEeC-------CCCHHHHHHhcc---cCCeEEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCCccccCC---
Confidence 4332 258899999887 678999999999999999874 588888999999999999986653221
Q ss_pred cHHHHHHhhhcCCeEEEEeccccccc-ccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMG-LYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
++ +. ...++++|++|.++ ..+.+.|+++ +.+++ +++.+.........+.+.+.++.+...|+.
T Consensus 184 ---pl----~~-gaDivv~S~tK~l~G~~d~~~G~vi--~~~~~----~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t-- 247 (386)
T PRK08045 184 ---PL----AL-GADLVLHSCTKYLNGHSDVVAGVVI--AKDPD----VVTELAWWANNIGVTGGAFDSYLLLRGLRT-- 247 (386)
T ss_pred ---ch----hh-CCCEEEeecceeccCCCCceeEEEE--eCcHH----HHHHHHHHHHhcCCCCCHHHHHHHHhhhcc--
Confidence 22 11 12488999999985 5667789885 44666 777777666666677888888877777754
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+...+++..+++..+.+.|+.++
T Consensus 248 --------l~~R~~~~~~na~~la~~L~~~p 270 (386)
T PRK08045 248 --------LVPRMELAQRNAQAIVKYLQTQP 270 (386)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHcCC
Confidence 45666778888888888888775
No 181
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.88 E-value=1.7e-20 Score=180.73 Aligned_cols=298 Identities=15% Similarity=0.093 Sum_probs=185.9
Q ss_pred cccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCC--
Q 013839 67 PVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPES-- 144 (435)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd-- 144 (435)
..+++.+.+++...... |. +.+++++++.+++....+. ++++ +++|++.|+.++ +.+++.+||
T Consensus 23 s~~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~----~~~~--~~~g~t~al~~a--l~al~~~Gd~~ 87 (363)
T TIGR01437 23 STVSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGV----EDAV--IVSSASAGIAQS--VAAVITRGNRY 87 (363)
T ss_pred CCCCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCC----CeEE--EEcCHHHHHHHH--HHHHhcCCCcc
Confidence 44555555544443322 32 2445666666655222221 2555 899999999998 777788888
Q ss_pred -------------EEEEcCCCChhh----HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEE-eCCCCC
Q 013839 145 -------------HIYFPDPTWSNH----HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLL-HPSAHN 206 (435)
Q Consensus 145 -------------~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~-~~~p~N 206 (435)
+|+++.|.|..| ...+...|++++.++. ++.+|++++++++. +++++++ +++|+|
T Consensus 88 ~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~---~~t~ai~~v~~~~~ 160 (363)
T TIGR01437 88 LVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAIT---EKTAAILYIKSHHC 160 (363)
T ss_pred hhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcC---hhceEEEEEecCCC
Confidence 999999888766 4667788999998865 24699999999998 6677655 678899
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEe
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILC 286 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~ 286 (435)
|+|...+.+ +|.++|++||+++|+|++|.. + ..... .. +.++++.|++|.+ +|++.|++++
T Consensus 161 ~~g~~~~~~---~i~~~a~~~gi~vivD~a~~~---~-----~~~~~---~~-g~D~~~~S~~K~l--~gp~~G~l~~-- 221 (363)
T TIGR01437 161 VQKSMLSVE---DAAQVAQEHNLPLIVDAAAEE---D-----LQKYY---RL-GADLVIYSGAKAI--EGPTSGLVLG-- 221 (363)
T ss_pred CcCCcCCHH---HHHHHHHHcCCeEEEECCCCC---c-----hHHHH---Hc-CCCEEEEeCCccc--CCCceEEEEE--
Confidence 999988754 889999999999999999751 1 11111 11 2367789999976 5888999863
Q ss_pred cChhHHHHHHHHHHHHhhccc--cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc
Q 013839 287 VDSKQAAAIRSQIQQIARAMY--GSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEH 364 (435)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~~~--~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 364 (435)
+++ +++.++....... .........++.+++... .+...+..+.+.++++.+.+.|++++. +..
T Consensus 222 -~~~----~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~------~~~~~~~~~~~~~~~~~l~~~L~~i~g---~~~ 287 (363)
T TIGR01437 222 -KKK----YIEWVKLQSKGIGRAMKVGKENILGLTAALEQY------LSTGKESGAEMVAKLTPFIEALNTLKG---VSA 287 (363)
T ss_pred -cHH----HHHHHHhccCCCcceeccCHHHHHHHHHHHHHH------HccCcccHHHHHHHHHHHHHHHhcCCC---eEE
Confidence 776 5555433221100 001111112222222110 111122333444566678888887742 333
Q ss_pred cc--cCcce------eEec----CCCHHHHHHHhhhcc--EEEeC----CC--cEEeccCCCCcHHHHHHHHHHH
Q 013839 365 IT--NQLGM------FCFS----GLTPYQVDRLAKEFH--IYMTQ----DG--RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 365 ~~--~~~g~------~~~~----~~~~~~~~~ll~~~g--I~i~p----gg--Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
.. +..+. ..+. +++.+.+.+.|++.+ |.+++ .| |+++...+++|++.++++|+++
T Consensus 288 ~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 288 SIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred EEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 32 11111 1121 456666666666666 88875 23 7777666889999999999875
No 182
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=9.6e-21 Score=188.51 Aligned_cols=262 Identities=14% Similarity=0.092 Sum_probs=173.5
Q ss_pred CCCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhhHHHHhh----CCCCeeeeeecCCCCCCcChHhHHHHh
Q 013839 115 EGRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNHHNIWRD----AQIPERTYHYYDPDSKSLDFAALMDDI 189 (435)
Q Consensus 115 ~~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~i 189 (435)
.+++. +++||++++..+ ++++ +.+||+|+++++.|+.+...++. .|++++.++. ++ + .+|++++++++
T Consensus 129 ~~~v~--~~~g~t~~~~~~--~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~-~~-~-~~d~~~l~~~i 201 (447)
T PRK00451 129 VANAS--MYDGATALAEAA--LMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY-ED-G-VTDLEALEAAV 201 (447)
T ss_pred cceEE--ecCcHHHHHHHH--HHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC-CC-C-CCCHHHHHHhc
Confidence 34666 899999988877 5555 46899999999999988876654 6899999987 33 4 79999999999
Q ss_pred hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee--eccCCCccCCCCcccHHHHHHhhhcCCeEEEEe-
Q 013839 190 KNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF--DMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQ- 266 (435)
Q Consensus 190 ~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~--Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~- 266 (435)
+ ++++++++++| ||||.+.+ +++|.++|+++|+++++ |.+..++.. .....+.++++.
T Consensus 202 ~---~~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~------------~~~~~~~D~~~~s 262 (447)
T PRK00451 202 D---DDTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLK------------PPGEYGADIVVGE 262 (447)
T ss_pred C---CCeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCC------------CcccCCCCEEEEC
Confidence 7 67899999998 99999854 77999999999999988 433211110 011123344444
Q ss_pred --cccccccccCCcccEEEEEecChhHHHHHHHHH----------------------------HHHhhccccCCChhHH-
Q 013839 267 --SYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQI----------------------------QQIARAMYGSPPVHGI- 315 (435)
Q Consensus 267 --s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~q- 315 (435)
+|||.+++.|+|+||+.+ +++ +++.+ +........+.+...+
T Consensus 263 ~~k~~~~~~~~Gpg~G~l~~---~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (447)
T PRK00451 263 GQPLGIPLSFGGPYLGFFAT---RKK----LVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNA 335 (447)
T ss_pred CCcCCCCCCCCCCCchHHHh---hHH----HHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHH
Confidence 788888889999999964 666 55442 1111111112222222
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEe--cC--CCH-HHHHHHhhhcc
Q 013839 316 LLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCF--SG--LTP-YQVDRLAKEFH 390 (435)
Q Consensus 316 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~--~~--~~~-~~~~~ll~~~g 390 (435)
.++...+.... ++.+++.++++.++++++.+.|++++. +.+. ++++|.+ +. .+. ++.++|+ ++|
T Consensus 336 ~aaa~~l~~~~-----~~g~~~~~~~~~~~~~~l~~~L~~~~g---~~~~--~~~~~~~~~v~~~~~~~~~~~~L~-~~g 404 (447)
T PRK00451 336 LAAAIYMSLLG-----PEGLRELAEQNHQKAHYLAERLAEIGG---VELF--DGPFFNEFVVRLPKPAEEVNEALL-EKG 404 (447)
T ss_pred HHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHHhhcCC---EEec--CCCeEEEEEEecCCCHHHHHHHHH-hcC
Confidence 22222222110 256788889999999999999998853 3443 3444443 33 343 4446664 566
Q ss_pred EEE----eCC-----C--cEEecc-CCCCcHHHHHHHHHHHH
Q 013839 391 IYM----TQD-----G--RISMAG-VTTGNVNYLANAIHEVT 420 (435)
Q Consensus 391 I~i----~pg-----g--Ris~~~-~~~e~i~~~~~~l~~~l 420 (435)
|.+ .+. + |+++.. .++++++++++.|++++
T Consensus 405 i~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 405 ILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 653 111 1 888752 37889999999998764
No 183
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.88 E-value=2.9e-20 Score=179.25 Aligned_cols=274 Identities=12% Similarity=0.065 Sum_probs=186.2
Q ss_pred CCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHH----hhCCC
Q 013839 90 SASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIW----RDAQI 165 (435)
Q Consensus 90 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~ 165 (435)
+......|+++++++. +. +.+ ++.+|++|+.++ +.+++.+||+|++++|+|.++...+ ...|+
T Consensus 49 ~~p~~~~Le~~lA~l~-~~-------~~v---~~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 49 SNPTWRALEAALGELE-GA-------EAL---VFPSGMAAITAV--LRALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred CCccHHHHHHHHHHHc-CC-------CEE---EECCHHHHHHHH--HHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 4567889999999987 32 233 578888898887 7777899999999999998886644 45788
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
+++.++.. ++ .+ .+. ++++++++++|+||||.+. ++++|+++|+++|+++|+|++|.... +
T Consensus 116 ~v~~v~~~-~~-----~~----~~~---~~t~lV~le~p~NPtg~v~---di~~I~~~a~~~g~~lvVD~t~~~~~-~-- 176 (366)
T PRK07582 116 TVREAPTA-GM-----AE----AAL---AGADLVLAETPSNPGLDVC---DLAALAAAAHAAGALLVVDNTTATPL-G-- 176 (366)
T ss_pred EEEEECCC-Ch-----HH----Hhc---cCceEEEEECCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCCCCcc-c--
Confidence 88888762 11 11 222 4688999999999999765 57799999999999999999985321 1
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccc-cccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCC
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSM-GLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSD 324 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 324 (435)
.. ++ +. ...++++|+||.+ |.+|+|+||++ +++++ +++.++.........++.+.+..+...+..
T Consensus 177 -~~--p~----~~-g~Divv~S~sK~l~G~~g~~~G~v~--~~~~~----l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t 242 (366)
T PRK07582 177 -QR--PL----EL-GADLVVASDTKALTGHSDLLLGYVA--GRDPE----LMAAVERWRLLAGAIPGPFEAWLAHRSLGT 242 (366)
T ss_pred -cC--ch----hc-CCcEEEecccccccCCCCeeEEEEE--cCcHH----HHHHHHHHHHHhCCCCCHHHHHHHHhcccc
Confidence 01 11 11 2247889999998 45679999996 43566 777777665555566777766666555543
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc----c-----------cCcceeEecCCCHHHHHHHhhhc
Q 013839 325 PNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI----T-----------NQLGMFCFSGLTPYQVDRLAKEF 389 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~-----------~~~g~~~~~~~~~~~~~~ll~~~ 389 (435)
+....++..++...+.+.|++++.-..+.+. . ..+|++.|.=-+.+.+.+.+++.
T Consensus 243 ----------l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l 312 (366)
T PRK07582 243 ----------LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAAS 312 (366)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhC
Confidence 2334466667888888888877531111110 1 13565554411566666677766
Q ss_pred cEEEe-C--C------------------C--cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 390 HIYMT-Q--D------------------G--RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 390 gI~i~-p--g------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
++... + | + |+|++- |+.+.+++.|.++++.
T Consensus 313 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~ 365 (366)
T PRK07582 313 RLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA 365 (366)
T ss_pred CcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 66553 1 1 1 888865 6677788888877754
No 184
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.88 E-value=2e-20 Score=182.40 Aligned_cols=285 Identities=15% Similarity=0.084 Sum_probs=188.1
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH----HHhhCCCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN----IWRDAQIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~ 167 (435)
.+..++|+.+++++.... .++|. ++.|+++++.++ +.+++.+||+|+++.++|..+.. ..+..|.++
T Consensus 44 ~~~~~~~~~la~~~~~~~-----~~~v~--~~~g~t~al~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~ 114 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPS-----SAHVV--FTNNATTALNIA--LKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEI 114 (376)
T ss_pred HHHHHHHHHHHHHhCcCC-----CCeEE--EeCCHHHHHHHH--HHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 566789999999884321 34677 899999999888 66678899999999999877643 345569999
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. ++++.+|+++++++++ ++++++++++|+||||..++.+ +|.++|+++|+++|+|+++..... +.
T Consensus 115 ~~v~~--~~~~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~~~~---~i~~l~~~~~~~livD~a~~~g~~-~~-- 183 (376)
T TIGR01977 115 TIVKC--DNEGLISPERIKRAIK---TNTKLIVVSHASNVTGTILPIE---EIGELAQENGIFFILDAAQTAGVI-PI-- 183 (376)
T ss_pred EEEec--CCCCCcCHHHHHHhcC---CCCeEEEEECCCCCccccCCHH---HHHHHHHHcCCEEEEEhhhccCcc-CC--
Confidence 98887 2356789999999997 5789999999999999999854 788999999999999999643222 11
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHH----------------hhccccCCC
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI----------------ARAMYGSPP 311 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~----------------~~~~~~~~~ 311 (435)
.+ ....-++++.|++|.++.|. .+|.+++ . +.. .+..+... .+....+++
T Consensus 184 ---~~----~~~~~D~~~~s~~K~l~~p~-g~g~l~~-~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~ 249 (376)
T TIGR01977 184 ---DM----TELAIDMLAFTGHKGLLGPQ-GTGGLYI-R-EGI----KLKPLKSGGTGSHSALIDQPSELPDRFESGTLN 249 (376)
T ss_pred ---Cc----hhcCCCEEEecccccccCCC-CceEEEE-c-CCc----CcCceecCCCccccccccccccchhhccCCCCC
Confidence 11 11245688899999875332 2566653 3 332 11111100 001122344
Q ss_pred hhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc-----CcceeE--ecCCCHHHHHH
Q 013839 312 VHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN-----QLGMFC--FSGLTPYQVDR 384 (435)
Q Consensus 312 ~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-----~~g~~~--~~~~~~~~~~~ 384 (435)
.....++..+++.- .+...+.++++.+++.+.+.+.|.+.+. +....+ ..+... ..+.+.+.+..
T Consensus 250 ~~~~~a~~~al~~~-----~~~g~~~~~~~~~~l~~~~~~~l~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 321 (376)
T TIGR01977 250 TPGIAGLNAGIKFI-----EKIGIANIAKKECMLTEKLLNGLREINK---VKIYGPADPANRVGVVSFTVEGIDSEEVAD 321 (376)
T ss_pred HHHHHHHHHHHHHH-----HHhCHHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCCCccccCCeEEEEECCCCHHHHHH
Confidence 44444444444321 1133567778888888999999886542 333222 123221 22456666655
Q ss_pred Hhhhc-cEEEeCC----------------C--cEEecc-CCCCcHHHHHHHHHH
Q 013839 385 LAKEF-HIYMTQD----------------G--RISMAG-VTTGNVNYLANAIHE 418 (435)
Q Consensus 385 ll~~~-gI~i~pg----------------g--Ris~~~-~~~e~i~~~~~~l~~ 418 (435)
.|.++ ||.+.+| + |+++.. .+++++++++++|++
T Consensus 322 ~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 322 ILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 55555 9998653 2 998754 378999999999875
No 185
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=5.3e-20 Score=179.16 Aligned_cols=212 Identities=16% Similarity=0.125 Sum_probs=151.9
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhh----HHHHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNH----HNIWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~ 169 (435)
...|++.++++... ++.+ ++.+|++|+.++ +.+++.+||+|+++.|+|... ...+...|.+++.
T Consensus 62 ~~~Le~~lA~l~g~-------~~~v---~~~sG~~Ai~~~--l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~ 129 (405)
T PRK08776 62 RDLLGEALAELEGG-------AGGV---ITATGMGAINLV--LNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALIT 129 (405)
T ss_pred HHHHHHHHHHHhCC-------CceE---EEcCHHHHHHHH--HHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEE
Confidence 45788888887632 2244 478889998887 777789999999999999873 3344556767766
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .|+++++++++ ++++++++++|+||||.+. ++++|+++|+++|+++|+|++|......
T Consensus 130 v~~-------~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~~~~~------ 190 (405)
T PRK08776 130 ADL-------TDPRSLADALA---QSPKLVLIETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLSPALQ------ 190 (405)
T ss_pred ECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 653 37889998887 5789999999999999985 5779999999999999999998642211
Q ss_pred HHHHHhhhcCCeEEEEeccccccccc-CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLY-GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~-G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
.++ . ....+++.|.+|.++.+ +...|+++ +.+++ +.+++.........+++.+.+.++...+
T Consensus 191 ~pl----~-~gaDivv~S~tK~l~g~~~~~~G~vv--~~~~~----l~~~l~~~~~~~g~~~s~~~a~l~~~gl------ 253 (405)
T PRK08776 191 KPL----E-FGADLVLHSTTKYINGHSDVVGGAVV--ARDAE----LHQQLVWWANALGLTGSPFDAFLTLRGL------ 253 (405)
T ss_pred Ccc----c-ccCCEEEecCceeecCCCCceEEEEE--eCCHH----HHHHHHHHHHhcCCCCCHHHHHHHHhhh------
Confidence 112 1 12348899999999755 45678875 44666 6666655444444456666665555433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.++...++..+++..+.+.|++++
T Consensus 254 ----~tl~~r~~~~~~na~~la~~L~~~p 278 (405)
T PRK08776 254 ----RTLDARLRVHQENADAIAALLDGHA 278 (405)
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3456677778888888888888765
No 186
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.87 E-value=4.5e-20 Score=179.68 Aligned_cols=290 Identities=15% Similarity=0.126 Sum_probs=185.0
Q ss_pred HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHH-HHHHh---CCCCEEEEcCCCChhhHHHHhhCCCCeeee
Q 013839 95 TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAE-FQRRF---HPESHIYFPDPTWSNHHNIWRDAQIPERTY 170 (435)
Q Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~-~~~~~---~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v 170 (435)
.++++.+++++ +.. ++++. ++.|+++++..+.. +..+. .+||+|++++++|..+...++..|++++.+
T Consensus 62 ~~~~~~la~~~-g~~-----~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v 133 (373)
T TIGR03812 62 EEVVGSLGNLL-HLP-----DAYGY--IVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYA 133 (373)
T ss_pred HHHHHHHHHHh-CCC-----CCCeE--EeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEE
Confidence 56778888777 332 23555 68899998776632 22211 467999999999999988899999999999
Q ss_pred eecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCc--cc
Q 013839 171 HYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLD--KD 248 (435)
Q Consensus 171 ~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~--~~ 248 (435)
+. ++++.+|++++++.+. +++..++...|+||||...+ +++|.++|+++++++++|++|..+...-.. ..
T Consensus 134 ~~--~~~~~~d~~~l~~~l~---~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~ 205 (373)
T TIGR03812 134 PL--DEDYTVDVKDVEDLID---DNTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYN 205 (373)
T ss_pred ee--CCCCCcCHHHHHHHHh---hCcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCC
Confidence 87 3457899999999987 44544444458999999865 558899999999999999998644311000 00
Q ss_pred HHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccc--------cCCChhHHHHHHH
Q 013839 249 AQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMY--------GSPPVHGILLVAT 320 (435)
Q Consensus 249 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~q~~~~~ 320 (435)
...+. + ....-..+..|.+| +++++.++|++++ . +++ +++.+.....+.. ...+.....++..
T Consensus 206 ~~~~d-~-~~~~~d~~~~s~~K-~~~~~~~~G~~~~-~-~~~----~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~ 276 (373)
T TIGR03812 206 PPPFD-F-SLPGVQSITIDPHK-MGLSPIPAGGILF-R-SKS----YLKYLSVDAPYLTVKKQATITGTRSGASAAATYA 276 (373)
T ss_pred CCCcc-c-cCCCCCEEEECccc-cCCCcCCceEEEE-e-CHH----HHhhhcccCcccCCCCCcceEeechhHHHHHHHH
Confidence 00000 0 00111234557779 6667788887752 3 666 5555532111111 1222333444444
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC-CHHHHHHHhhhccEEEeCC-C-
Q 013839 321 ILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL-TPYQVDRLAKEFHIYMTQD-G- 397 (435)
Q Consensus 321 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~ll~~~gI~i~pg-g- 397 (435)
++..-. ++..++..++..++++++++.|+++|.. .+..+..+ ++.+.+ +.+.+.+.|.++||.+.++ +
T Consensus 277 ~l~~l~-----~~g~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~-~v~~~~~~~~~v~~~L~~~gi~v~~~~~~ 347 (373)
T TIGR03812 277 VIKYLG-----REGYRKIVAECMENTRYLVEELKKIGFE---PVIEPVLN-IVAFEVDDPEEVRKKLRDRGWYVSVTRCP 347 (373)
T ss_pred HHHHhC-----HHHHHHHHHHHHHHHHHHHHHHHhCCCe---EEcCCCce-EEEEEeCCHHHHHHHHHHCCceeccCCCC
Confidence 443211 2456778889999999999999988741 23334444 333333 3344544446679999875 2
Q ss_pred ---cEEecc-CCCCcHHHHHHHHHH
Q 013839 398 ---RISMAG-VTTGNVNYLANAIHE 418 (435)
Q Consensus 398 ---Ris~~~-~~~e~i~~~~~~l~~ 418 (435)
|+++.. .+++++++++++|++
T Consensus 348 ~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 348 KALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred CEEEEEEECCCCHHHHHHHHHHHhh
Confidence 998753 278999999999875
No 187
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.87 E-value=7.9e-20 Score=176.92 Aligned_cols=216 Identities=15% Similarity=0.079 Sum_probs=157.4
Q ss_pred CCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH----HhhCCC
Q 013839 90 SASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI----WRDAQI 165 (435)
Q Consensus 90 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~ 165 (435)
+..-..+|.+.++++..+. ..+ ++++|++|+.++ +.+++.+||+|+++.+.|...... +...|+
T Consensus 38 ~~p~~~~le~~la~l~g~~--------~a~--~~~sG~~Ai~~~--l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 38 GNPTVDALEKKLAALEGGE--------AAL--AFSSGMAAISTV--LLALLKAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred CChhHHHHHHHHHHHHCCC--------CEE--EEcCHHHHHHHH--HHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 3445678999999887322 333 689999999888 777789999999999999876543 446787
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
++..++. + |+++++++++ +++++|++.+|+||+|.+.+ +++|+++|++||+++|+|++|.......
T Consensus 106 ~~~~v~~---~----d~~~l~~~i~---~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~- 171 (369)
T cd00614 106 EVTFVDP---D----DPEALEAAIK---PETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR- 171 (369)
T ss_pred EEEEeCC---C----CHHHHHHhcC---CCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC-
Confidence 7777754 1 5888998887 57899999999999998876 6699999999999999999986543211
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCC
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSD 324 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 324 (435)
++ + ...++++.|+||.++.+| .+.||++ +++++ +++.++.........++...+.++...|+.
T Consensus 172 -----~~----~-~g~Divv~S~tK~l~g~~~~~gG~v~--~~~~~----l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t 235 (369)
T cd00614 172 -----PL----E-LGADIVVHSATKYIGGHSDVIAGVVV--GSGEA----LIQRLRFLRLALGTILSPFDAWLLLRGLKT 235 (369)
T ss_pred -----hh----h-hCCcEEEeccceeccCCCCceEEEEE--eCcHH----HHHHHHHHHHhhCCCCCHHHHHHHHcCCCC
Confidence 11 1 134688999999998666 6789986 32336 667677655544455666655555444432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 325 PNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+....++..++.+.+.+.|++++
T Consensus 236 ----------l~~r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 236 ----------LPLRMERHSENALKVAEFLEKHP 258 (369)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHcCC
Confidence 33456677778888888998876
No 188
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=6.8e-20 Score=177.07 Aligned_cols=287 Identities=20% Similarity=0.201 Sum_probs=204.0
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhh----HHHHhhCCCCe
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNH----HNIWRDAQIPE 167 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~ 167 (435)
-+.+.|+.+++++.... .++|+ +|.|+|+++.+++..+.. +.+||+|++.+--|+.. ....+..|+++
T Consensus 67 ~~e~aRe~va~~~~a~~-----~~eIv--ft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v 139 (405)
T COG0520 67 LYEAAREAVARFLNADS-----SDEIV--FTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKV 139 (405)
T ss_pred HHHHHHHHHHHHhCCCC-----CCeEE--EeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEE
Confidence 46789999999984332 25788 999999999999532221 68999999999776543 34455679999
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.+|+ + +++.++.+.++..+. ++|+++.+++.+|.||.+.+ +++|+++|+++|+++++|.+ +.....+.
T Consensus 140 ~~i~~-~-~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaa-q~~~h~~i-- 208 (405)
T COG0520 140 RVIPL-D-DDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAA-QAAGHLPI-- 208 (405)
T ss_pred EEEec-C-CCCCcCHHHHHHhcC---CCceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECc-cccCccCC--
Confidence 99998 3 567899999999887 88999999999999999876 56999999999999999999 33333222
Q ss_pred cHHHHHHhhhcCCeEEEEecccc-cccccCCcccEEEEEecChhHHHHHHHHHHHH----------------------hh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAK-SMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI----------------------AR 304 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK-~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~----------------------~~ 304 (435)
++ ..-+.+++..|..| .+|..| +|.+.+ .++ +.+.+... .+
T Consensus 209 ---dv----~~l~~Df~afsgHKwl~gP~G--iGvLy~---r~~----~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~r 272 (405)
T COG0520 209 ---DV----QELGCDFLAFSGHKWLLGPTG--IGVLYV---RKE----LLEELEPFLGGGGMIEYVSRDEGVTLAELPLR 272 (405)
T ss_pred ---Cc----hhcCCCEEEEcccccccCCCc--eEEEEE---chH----HHhhcCCcccCCCceeeecccccccccCcchh
Confidence 11 22367899999999 777557 577754 777 55544210 01
Q ss_pred ccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc----CcceeEec--CCC
Q 013839 305 AMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN----QLGMFCFS--GLT 378 (435)
Q Consensus 305 ~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~----~~g~~~~~--~~~ 378 (435)
.-...++.....++.++++-- .....+++.++.++..+++.+.|++++. +.++.+ ..+.+.|. +.+
T Consensus 273 fe~gTpn~~~~i~l~aAl~~~-----~~ig~~~i~~~e~~L~~~~~~~L~~~~~---v~i~g~~~~~r~~~vsF~v~~~~ 344 (405)
T COG0520 273 FEAGTPNIAGAIGLAAALDYL-----LEIGMEAIEAHERELTEYLLEGLSELPG---VEIYGPPDADRGGIVSFNVKGIH 344 (405)
T ss_pred hccCCchHHHHHhHHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHHHhcCCC---eEEecCCcccCceEEEEEeCCCC
Confidence 111223333333444444321 1233567777888888899999988863 455443 35555553 667
Q ss_pred HHHHHHHhhhccEEEeCCC----------------cEEeccC-CCCcHHHHHHHHHHHHH
Q 013839 379 PYQVDRLAKEFHIYMTQDG----------------RISMAGV-TTGNVNYLANAIHEVTR 421 (435)
Q Consensus 379 ~~~~~~ll~~~gI~i~pgg----------------Ris~~~~-~~e~i~~~~~~l~~~l~ 421 (435)
...+...|.++||.++.|. |+|++.. |.||+++++++|+++.+
T Consensus 345 ~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 345 PHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 7777777788999999771 8987533 88999999999998764
No 189
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1.3e-19 Score=176.02 Aligned_cols=216 Identities=14% Similarity=0.103 Sum_probs=150.0
Q ss_pred CCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh----hCCC
Q 013839 90 SASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR----DAQI 165 (435)
Q Consensus 90 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~----~~g~ 165 (435)
+.....+|+++++++..... .+ .+.+|++|+.++ +.+++.+||+|++++|+|......+. ..|+
T Consensus 59 ~~p~~~~Le~~lA~~~g~~~-------~i---~~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi 126 (388)
T PRK07811 59 GNPTRTALEEQLAALEGGAY-------GR---AFSSGMAATDCL--LRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGV 126 (388)
T ss_pred CCccHHHHHHHHHHHhCCCc-------eE---EeCCHHHHHHHH--HHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence 44567899999999984332 23 467889999888 77778999999999999986544333 2466
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
++..++. .|++++++++. +++++|++++|+||||.. .++++|+++|+++|+++|+|++|.......
T Consensus 127 ~~~~~d~-------~d~e~l~~~i~---~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~~- 192 (388)
T PRK07811 127 EYTPVDL-------SDLDAVRAAIT---PRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQQ- 192 (388)
T ss_pred EEEEeCC-------CCHHHHHHhcC---cCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 6655543 48899999987 678999999999999875 567799999999999999999986543221
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCC
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSD 324 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 324 (435)
++. ....+++.|++|.++.+| .+.||++ +++++ +.+.++..........+...+..+...|+
T Consensus 193 -----p~~-----~gaDivv~S~sK~l~g~~~~~gG~vv--~~~~~----l~~~~~~~~~~~g~~~s~~~a~l~~~~L~- 255 (388)
T PRK07811 193 -----PLA-----LGADVVVHSTTKYIGGHSDVVGGALV--TNDEE----LDEAFAFLQNGAGAVPGPFDAYLTLRGLK- 255 (388)
T ss_pred -----chh-----hCCcEEEecCceeecCCCCcEEEEEE--ECCHH----HHHHHHHHHHhcCCCCCHHHHHHHHhccC-
Confidence 111 123589999999998655 4568886 43566 65655554433333344443333333332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 325 PNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
.+....++..++...+.+.|++++
T Consensus 256 ---------tl~~R~~~~~~na~~la~~L~~~p 279 (388)
T PRK07811 256 ---------TLAVRMDRHSENAEAVAEFLAGHP 279 (388)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 234455566777788888888764
No 190
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.87 E-value=8.8e-20 Score=179.19 Aligned_cols=280 Identities=14% Similarity=0.069 Sum_probs=175.2
Q ss_pred CeeeEecCCchhHHHHHHHHHHHh--------CCCCEEEEcCCCChhhHHHH-hhCCCCee---eeeecC--CCCCCcCh
Q 013839 117 RSAGVQALSGTGACRLFAEFQRRF--------HPESHIYFPDPTWSNHHNIW-RDAQIPER---TYHYYD--PDSKSLDF 182 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~~--------~~gd~Vlv~~p~y~~~~~~~-~~~g~~~~---~v~~~~--~~~~~~d~ 182 (435)
.+. ++++|++|++.+..+.... ..+++|++.+-+|.+..... ...+.... ..+... ..-...|+
T Consensus 90 ~~~--~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 167 (400)
T PTZ00125 90 KVL--PMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDV 167 (400)
T ss_pred EEE--EeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCH
Confidence 555 8999999999986433211 13478888888887654332 22221100 001000 00011388
Q ss_pred HhHHHHhhcCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCe
Q 013839 183 AALMDDIKNAPDSSFFLLHPSAHNPTGVDPT-EEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHL 261 (435)
Q Consensus 183 e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 261 (435)
+++++.+. .+++++|++.+++||||..++ .+.+++|.++|++||+++|+||+|.+++..+ ...... ..+....
T Consensus 168 ~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G---~~~~~~-~~~~~pd 241 (400)
T PTZ00125 168 EALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG---KLLAHD-HEGVKPD 241 (400)
T ss_pred HHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhHHH-hcCCCCC
Confidence 99999885 246889999999999999986 4569999999999999999999998776543 111211 1122122
Q ss_pred EEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 013839 262 IGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADR 341 (435)
Q Consensus 262 ~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~ 341 (435)
++ ++||.++.+++|+||+++ +++ +++.+.......+.+.+.+.+.++.+.|+.-. + ....++
T Consensus 242 ~~---~~sK~l~~g~~~ig~v~~---~~~----~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~------~--~~~~~~ 303 (400)
T PTZ00125 242 IV---LLGKALSGGLYPISAVLA---NDD----VMLVIKPGEHGSTYGGNPLACAVAVEALEVLK------E--EKLAEN 303 (400)
T ss_pred EE---EEcccccCCCcCcEEEEE---cHH----HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH------h--cCHHHH
Confidence 22 478999854469999974 777 77776654444456677788887766664211 1 123344
Q ss_pred HHHHHHHHHHHHHhh-CCCCCccccccCcceeEecCC------CH-HHHHHHhhhccEEEeCCC----cEEec-cCCCCc
Q 013839 342 IQRKRTTLRQNLEKL-GSSLNWEHITNQLGMFCFSGL------TP-YQVDRLAKEFHIYMTQDG----RISMA-GVTTGN 408 (435)
Q Consensus 342 ~~~~~~~l~~~l~~~-~~~~~~~~~~~~~g~~~~~~~------~~-~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~ 408 (435)
.+++.+.+.+.|+++ .....+....+ .|.+.++.+ +. ++...+ .++||.+.|++ ||+.. ..++++
T Consensus 304 ~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~lRi~~~~~~~~~~ 381 (400)
T PTZ00125 304 AQRLGEVFRDGLKELLKKSPWVKEIRG-KGLLNAIVFDHSDGVNAWDLCLKL-KENGLLAKPTHDNIIRFAPPLVITKEQ 381 (400)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEec-ccEEEEEEEccCcchHHHHHHHHH-HHCCeEEeecCCCEEEEECCccCCHHH
Confidence 555556666666554 11111122334 455555533 22 344555 46899999875 89853 348899
Q ss_pred HHHHHHHHHHHHHhhh
Q 013839 409 VNYLANAIHEVTRSEQ 424 (435)
Q Consensus 409 i~~~~~~l~~~l~~~~ 424 (435)
+++++++|.++++++.
T Consensus 382 i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 382 LDQALEIIKKVLKSFD 397 (400)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988764
No 191
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.87 E-value=2.2e-20 Score=173.99 Aligned_cols=299 Identities=17% Similarity=0.115 Sum_probs=208.9
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHH--HHHhC--CCCEEEEcCCCChhhHHHHhhC---CC
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEF--QRRFH--PESHIYFPDPTWSNHHNIWRDA---QI 165 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~--~~~~~--~gd~Vlv~~p~y~~~~~~~~~~---g~ 165 (435)
.+.+.|+.||+.+... +++|+ +|+|||++.+++..- .+.-. .|.++++..--++...+.++.. |.
T Consensus 45 ~ve~AR~~iA~llga~------~~eIi--FTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~ 116 (386)
T COG1104 45 AVEEAREQIAKLLGAD------PEEII--FTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGF 116 (386)
T ss_pred HHHHHHHHHHHHhCCC------CCeEE--EecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCC
Confidence 4577888899988433 56888 999999999998422 22222 4789999988777776666544 99
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
++.++|. ..++.+|+++|+++++ ++|.+|.+...||.||++.+.+ +|.++|+++++++.+|.+ +.++--+.
T Consensus 117 ~Vtyl~V--~~~G~v~~e~L~~al~---~~T~LVSim~aNnE~G~IQpI~---ei~~i~k~~~i~fHvDAv-Qa~Gkipi 187 (386)
T COG1104 117 EVTYLPV--DSNGLVDLEQLEEALR---PDTILVSIMHANNETGTIQPIA---EIGEICKERGILFHVDAV-QAVGKIPI 187 (386)
T ss_pred eEEEeCC--CCCCeEcHHHHHHhcC---CCceEEEEEecccCeeecccHH---HHHHHHHHcCCeEEEehh-hhcCceec
Confidence 9999988 3468999999999998 7899999999999999987755 999999999999999999 55543221
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCCh
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDP 325 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 325 (435)
.+ ....-++...|-.|..|..| +|.+.+ .+.-.+..++..--+-........+.++..++..+++..
T Consensus 188 -----~~----~~~~vD~ls~SaHK~~GpkG--iGaLyv--~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a 254 (386)
T COG1104 188 -----DL----EELGVDLLSFSAHKFGGPKG--IGALYV--RPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIA 254 (386)
T ss_pred -----cc----cccCcceEEeehhhccCCCc--eEEEEE--CCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 11 11124667778889999888 577753 122211111111111111112334444445555565543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC----CccccccCcceeEecCCCHHHHHHHhhhccEEEeCCC----
Q 013839 326 NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSL----NWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDG---- 397 (435)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pgg---- 397 (435)
. +.++....++...|+.|.+.|.+..... .-...-|..-.+.+.++..+.+...|+.+||++..|.
T Consensus 255 ~------~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS 328 (386)
T COG1104 255 V------EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSS 328 (386)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccC
Confidence 2 5667777889999999999998752110 0012233445566778898888777888999998761
Q ss_pred -----------------------cEEeccC-CCCcHHHHHHHHHHHHHhhhhhh
Q 013839 398 -----------------------RISMAGV-TTGNVNYLANAIHEVTRSEQETA 427 (435)
Q Consensus 398 -----------------------Ris~~~~-~~e~i~~~~~~l~~~l~~~~~~~ 427 (435)
||||+.. ++++++++++.|.+++++++..+
T Consensus 329 ~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~~ 382 (386)
T COG1104 329 GSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRELS 382 (386)
T ss_pred CCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999765 78899999999999999887544
No 192
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.87 E-value=1.3e-19 Score=176.66 Aligned_cols=212 Identities=15% Similarity=0.078 Sum_probs=149.4
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH----HHHhhCCCCee
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH----NIWRDAQIPER 168 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~ 168 (435)
....|++.++++.... +.+ .+++|+.|+.++ +.+++.+||+|+++.|.|.... ..+...|++++
T Consensus 66 ~~~~le~~lA~l~g~~-------~~i---~~~sG~~Al~~~--l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~ 133 (403)
T PRK07503 66 TLALLEQRMASLEGGE-------AAV---ALASGMGAITAT--LWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVR 133 (403)
T ss_pred hHHHHHHHHHHHhCCC-------cEE---EEcCHHHHHHHH--HHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEE
Confidence 4678999999887432 122 588999998888 6667899999999999986543 34456788888
Q ss_pred eeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCccc
Q 013839 169 TYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKD 248 (435)
Q Consensus 169 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~ 248 (435)
.++. .|+++++++++ +++++|++++|+||||...+ +++|.++|+++|+++|+|++|.......
T Consensus 134 ~vd~-------~d~~~l~~~i~---~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~~---- 196 (403)
T PRK07503 134 HVDL-------TDPAALKAAIS---DKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQR---- 196 (403)
T ss_pred EeCC-------CCHHHHHHhcC---ccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC----
Confidence 7765 26889999887 67899999999999998875 5689999999999999999986543221
Q ss_pred HHHHHHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHH--hhccccCCChhHHHHHHHHhCCh
Q 013839 249 AQAIRIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQI--ARAMYGSPPVHGILLVATILSDP 325 (435)
Q Consensus 249 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~~~~~~l~~~ 325 (435)
++ . ...++++.|+||.++.+| .|.||++ . +++ ++++++.. .......++.+.+..+..-|+
T Consensus 197 --~l----~-~g~Di~v~S~tK~l~g~gd~~gG~v~--~-~~~----l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~-- 260 (403)
T PRK07503 197 --PL----E-LGADLVVHSATKYLGGHGDITAGLVV--G-GKA----LADRIRLEGLKDMTGAVMSPFDAFLLMRGLK-- 260 (403)
T ss_pred --ch----h-hCCCEEEccccccccCCCceeEEEEE--c-CHH----HHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc--
Confidence 12 1 123588999999999766 5677775 3 777 66666532 223334555555544433332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 326 NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
.+....++..++...+.+.|++++
T Consensus 261 --------tl~~r~~~~~~na~~~a~~L~~~p 284 (403)
T PRK07503 261 --------TLALRMDRHCASAQAVAEWLARHP 284 (403)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 334444455566777777777664
No 193
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=1.2e-19 Score=176.17 Aligned_cols=213 Identities=14% Similarity=0.074 Sum_probs=149.1
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH----HHHhhCCCCee
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH----NIWRDAQIPER 168 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~ 168 (435)
....|++.++++.... ..+ ++++|+.|+.++ +.+++.+||+|+++.|.|.... ..+...|+++.
T Consensus 60 ~~~~le~~lA~l~g~~--------~av--~~~sG~~Ai~~~--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~ 127 (391)
T TIGR01328 60 TVSNLEGRIAFLEGTE--------AAV--ATSSGMGAIAAT--LLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVD 127 (391)
T ss_pred hHHHHHHHHHHHhCCC--------cEE--EECCHHHHHHHH--HHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEE
Confidence 3467999999998432 223 688999998877 7777899999999999886543 33456788887
Q ss_pred eeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCccc
Q 013839 169 TYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKD 248 (435)
Q Consensus 169 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~ 248 (435)
.++. + |++++++++. +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 128 ~vd~---~----d~e~l~~~i~---~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~---- 190 (391)
T TIGR01328 128 FINM---A----IPEEVKAHIK---DNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN---- 190 (391)
T ss_pred EECC---C----CHHHHHHhhc---cCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC----
Confidence 7765 1 7889999887 67899999999999998876 5689999999999999999986543221
Q ss_pred HHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhc-c-ccCCChhHHHHHHHHhCChh
Q 013839 249 AQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARA-M-YGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 249 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~~~~~~q~~~~~~l~~~~ 326 (435)
++ +. ...+++.|+||.++.+|.++|++++ + +++ +++.++..... . ...++....+.+...|+
T Consensus 191 --~~----~~-g~Divv~S~sK~lgg~g~~~gG~v~-~-~~~----li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~--- 254 (391)
T TIGR01328 191 --PV----AL-GVDVVVHSATKYIGGHGDVVAGLIC-G-KAE----LLQQIRMVGIKDMTGSVISPFDAWLILRGLK--- 254 (391)
T ss_pred --ch----hc-CCCEEEccccccccCCCCceEEEEE-c-CHH----HHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC---
Confidence 11 11 2348889999999989988654432 3 777 66666653322 1 22344443333333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
.+....++..++.+.+.+.|++++
T Consensus 255 -------tl~~r~~~~~~na~~la~~L~~~p 278 (391)
T TIGR01328 255 -------TLNIRMKRHSENAMKVAEYLKSHP 278 (391)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 234445667777778888887764
No 194
>PRK07505 hypothetical protein; Provisional
Probab=99.87 E-value=2.8e-19 Score=175.50 Aligned_cols=355 Identities=14% Similarity=0.024 Sum_probs=195.7
Q ss_pred HhhhhhhhccccccccccccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcC-C---
Q 013839 8 RAARRCSVHTTSSRTVGWWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-S--- 83 (435)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~--- 83 (435)
|+.+.|++.-.-+....+. +.......+ + ..++...+|++...+... ...+++++++.+++.. +
T Consensus 13 ~~~~~~~~~~~~~~~~~~~--~~~~~G~~~------~-d~~g~~~ld~~s~~~lgl---~~~p~v~~A~~~~l~~~g~~~ 80 (402)
T PRK07505 13 NRAEKFWDAAYDEGLNGLT--VGEREGILI------T-LADGHTFVNFVSCSYLGL---DTHPAIIEGAVDALKRTGSLH 80 (402)
T ss_pred HhhHHHHHHHHhcccccce--eeccCCccE------E-ecCCceEEEeecCCccCC---CCCHHHHHHHHHHHHHhCCCC
Confidence 7777899876444333211 111111111 1 235678999987665222 2233334444444431 1
Q ss_pred CCCCC--CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHH--HhCCCC-EEEEcCCCChhhHH
Q 013839 84 EFLES--ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQR--RFHPES-HIYFPDPTWSNHHN 158 (435)
Q Consensus 84 ~~~~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~--~~~~gd-~Vlv~~p~y~~~~~ 158 (435)
..... .......++++.+++++. . . .+ ++++|++|...+..+.. .+.+|+ .|++.+..|.+-..
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~~~-~--~-----~~---~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~ 149 (402)
T PRK07505 81 LSSSRTRVRSQILKDLEEALSELFG-A--S-----VL---TFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLN 149 (402)
T ss_pred CCccchhhhhHHHHHHHHHHHHHhC-C--C-----EE---EECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHH
Confidence 01100 112334677777777762 2 1 23 46677778876643332 222343 36677765543211
Q ss_pred ---HHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeec
Q 013839 159 ---IWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDM 235 (435)
Q Consensus 159 ---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~De 235 (435)
.....+.+++.+|. .|++.+++++. ++++++++++|+||||.+.+ +++|.++|++|++++|+||
T Consensus 150 ~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~---~~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DE 216 (402)
T PRK07505 150 ILKGICADETEVETIDH-------NDLDALEDICK---TNKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDD 216 (402)
T ss_pred hhhhhhhcCCeEEEeCC-------CCHHHHHHHHh---cCCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEEC
Confidence 11223445565553 37889999886 45678888999999999988 5688899999999999999
Q ss_pred cCCCccCCCCcccHHHHHHhhh-cCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcccc--CCCh
Q 013839 236 AYQGFASGDLDKDAQAIRIFLE-DEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYG--SPPV 312 (435)
Q Consensus 236 ay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~ 312 (435)
+|....++... .......+.. ..+++++++|+||.++.+| ||++ +++++ +++.+.+.....+. +++.
T Consensus 217 a~~~~~~g~~g-~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~--~~~~~----~~~~~~~~~~~~t~~~~~~~ 286 (402)
T PRK07505 217 AHGLSIYGKNG-EGYVRSELDYRLNERTIIAASLGKAFGASG---GVIM--LGDAE----QIELILRYAGPLAFSQSLNV 286 (402)
T ss_pred cccccCcCCCC-CchHHHHcCCCCCCCeEEEEechhhhhccC---eEEE--eCCHH----HHHHHHHhCCCceeCCCCCH
Confidence 98544333211 1122222322 4678999999999999776 8874 33667 77777664433222 3444
Q ss_pred hHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEec--CC--CHHHH-HHHhh
Q 013839 313 HGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS--GL--TPYQV-DRLAK 387 (435)
Q Consensus 313 ~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~--~~--~~~~~-~~ll~ 387 (435)
+++.++.+.+.... ++.+.+.+++++++.+.+.+.+... ....+.++.++ +- ..+.+ +.+ .
T Consensus 287 ~a~aa~~a~l~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~--------~~g~~~~i~~~~~~~~~~~~~~~~~l-~ 352 (402)
T PRK07505 287 AALGAILASAEIHL-----SEELDQLQQKLQNNIALFDSLIPTE--------QSGSFLPIRLIYIGDEDTAIKAAKQL-L 352 (402)
T ss_pred HHHHHHHHHHHHHh-----ccCcHHHHHHHHHHHHHHHHHHHhc--------CCCCCCCEEEEEeCCHHHHHHHHHHH-H
Confidence 55555555543100 0222333444444444332222110 01122222222 21 12334 555 5
Q ss_pred hccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHHHHh
Q 013839 388 EFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 388 ~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~l~~ 422 (435)
++||.+.+. + ||++.. .+++++++++++|.+++++
T Consensus 353 ~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 353 DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 689999763 2 888752 3889999999999988754
No 195
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=3.8e-19 Score=171.71 Aligned_cols=214 Identities=12% Similarity=0.062 Sum_probs=154.9
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHH----hhCCCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIW----RDAQIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~ 167 (435)
.....|.+++|++..+ ++++ +++||++|+.++ +.+++.+||+|+++.|+|.+....+ ...|+++
T Consensus 53 pt~~~Le~~lA~leg~--------e~iv--vt~gg~~Ai~~~--l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v 120 (388)
T PRK08861 53 PNRGLLEQTLSELESG--------KGAV--VTNCGTSALNLW--VSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKV 120 (388)
T ss_pred chHHHHHHHHHHHhCC--------CeEE--EECCHHHHHHHH--HHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEE
Confidence 3467899999999742 2566 899999999988 7777899999999999998654433 2345566
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. .|++++++++. +++++|++++|+||||.+++.+ +|.++|+++|+++|+|++|....+..
T Consensus 121 ~~vd~-------~d~e~l~~~i~---~~tklV~lesP~NPtG~v~dl~---~I~~la~~~gi~vIvDea~~~~~~~~--- 184 (388)
T PRK08861 121 QFVDQ-------SDAAALDAALA---KKPKLILLETPSNPLVRVVDIA---ELCQKAKAVGALVAVDNTFLTPVLQK--- 184 (388)
T ss_pred EEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCccccccCC---
Confidence 65532 47899998887 6789999999999999999855 88889999999999999986543221
Q ss_pred cHHHHHHhhhcCCeEEEEeccccccccc-CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLY-GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~-G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
++ +. .-.+++.|++|.++-+ +...|+++ +.+++ +.++++.........++++..+.+..-|+.
T Consensus 185 ---pl----~~-GaDivv~S~tK~l~G~~d~~gG~i~--~~~~~----~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-- 248 (388)
T PRK08861 185 ---PL----EL-GADFVIHSTTKYINGHSDVIGGVLI--TKTKE----HAEELAWWGNCIGATGTPFDSYMTLRGIRT-- 248 (388)
T ss_pred ---Cc----cc-CCCEEEeecceeccCCCcceeEEEE--ecHHH----HHHHHHHHHhccCCCCChHHHHHHHhcCCC--
Confidence 11 11 2458899999998643 45678875 43455 666666555454556666665655555543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+....++..++...+.+.|+.++
T Consensus 249 --------l~lR~~~~~~~a~~~a~~L~~~p 271 (388)
T PRK08861 249 --------LGARMRVHEESAQQILAYLQTQS 271 (388)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 34555677777788888888775
No 196
>PLN00144 acetylornithine transaminase
Probab=99.86 E-value=2.1e-19 Score=174.39 Aligned_cols=336 Identities=14% Similarity=0.108 Sum_probs=200.3
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..+|+..|.-...-| .-.+++++++.+++... .+ +.. ....+....+++.+..... .+.+. ++++|
T Consensus 12 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~-~~-~~~-~~~~~~~~~la~~l~~~~~----~~~v~--f~~sG 81 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNALG-HGDPDWVKAVAEQAGTL-AH-VSN-VYHTIPQVELAKRLVASSF----ADRVF--FCNSG 81 (382)
T ss_pred CCCCEEEECCcCHHhccCC-CCCHHHHHHHHHHHHhc-CC-ccc-cccCHHHHHHHHHHHhcCC----CCeEE--EeCCc
Confidence 3567899987774211111 12234444444554421 11 111 1112233445555432211 24677 89999
Q ss_pred hhHHHHHHHHHHHhCC-------------CCEEEEcCCCChhhHHHHhhCCCCe----eeeeecCCCC---CCcChHhHH
Q 013839 127 TGACRLFAEFQRRFHP-------------ESHIYFPDPTWSNHHNIWRDAQIPE----RTYHYYDPDS---KSLDFAALM 186 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~----~~v~~~~~~~---~~~d~e~l~ 186 (435)
++|++.+..+...... ..+|+....+|.+............ ...|.. +.. .-.|++.++
T Consensus 82 seA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~ 160 (382)
T PLN00144 82 TEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLM-PGVTFVEYGNLEAAR 160 (382)
T ss_pred HHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCC-CCeEEeCCCCHHHHH
Confidence 9999999755543321 2578888888877654333221110 001100 000 012788898
Q ss_pred HHhhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEE
Q 013839 187 DDIKNAPDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCA 265 (435)
Q Consensus 187 ~~i~~~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 265 (435)
+.+.. .+.+++++...+||.|+.. +.+.+++|.++|++||+++|+||+|.+|...+ ..++.....-.++ +
T Consensus 161 ~~~~~--~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g---~~~~~~~~~~~PD----i 231 (382)
T PLN00144 161 KLIQK--GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG---YLWAHEAYGVEPD----I 231 (382)
T ss_pred HhcCC--CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hHhhhhhcCCCCC----E
Confidence 88752 3566666665699955433 34459999999999999999999999887654 1222212211223 7
Q ss_pred ecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHh---CChhhHHHHHHHHHHHHHHH
Q 013839 266 QSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATIL---SDPNLKSLWIDEVKIMADRI 342 (435)
Q Consensus 266 ~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l---~~~~l~~~~~~~~~~~~~~~ 342 (435)
.+|||.++ +|+|+||+++ +++ +.+.+.......+.+.+++++.++.+.| .+++ +.++++...+++
T Consensus 232 ~t~sK~l~-~G~pig~v~~---~~~----~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~----~~~~~~~~g~~l 299 (382)
T PLN00144 232 MTLAKPLA-GGLPIGAVLV---TEK----VASAINPGDHGSTFAGGPLVCNAALAVLDKISKPG----FLASVAKKGEYL 299 (382)
T ss_pred EEeccccc-CCcceEEEEE---cHH----HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhch----HHHHHHHHHHHH
Confidence 78999998 8999999975 777 7776654334556678888888887444 3332 233444444444
Q ss_pred HHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC---HHHHHHHhhhccEEEeCCC-----cEEecc-CCCCcHHHHH
Q 013839 343 QRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT---PYQVDRLAKEFHIYMTQDG-----RISMAG-VTTGNVNYLA 413 (435)
Q Consensus 343 ~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~ll~~~gI~i~pgg-----Ris~~~-~~~e~i~~~~ 413 (435)
++.+.+.+.+.+. +.... ..|++.|+.++ ..++..+ .++||.+.|++ |++++. .+++++++++
T Consensus 300 ---~~~l~~~~~~~~~---~~~vr-g~G~~~~l~l~~~~~~~~~~~-~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~ 371 (382)
T PLN00144 300 ---RELLRRKLGGNPH---VKEVR-GVGLLVGIQLDVPAGPLVDAC-RDSGLLVLTAGKGDVVRLVPPLVISEAELEQAV 371 (382)
T ss_pred ---HHHHHHHHhhCCC---ceeee-cCceEEEEEecCccHHHHHHH-HHCCeEEeecCCCCEEEEeCCCccCHHHHHHHH
Confidence 2334444444432 11222 37889998662 3344554 56999999864 898866 6889999999
Q ss_pred HHHHHHHHh
Q 013839 414 NAIHEVTRS 422 (435)
Q Consensus 414 ~~l~~~l~~ 422 (435)
++|.+++.+
T Consensus 372 ~~l~~~l~~ 380 (382)
T PLN00144 372 EILADCLPA 380 (382)
T ss_pred HHHHHHHHh
Confidence 999998864
No 197
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.86 E-value=1.7e-19 Score=176.27 Aligned_cols=329 Identities=12% Similarity=0.081 Sum_probs=202.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC--CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE--FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
+++..||+..|...+.-|. ..+++++++.+++.... ...|. ..-..+|.+.+++.. + .+.+. ++++
T Consensus 33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~la~~L~~~~-~-------~~~~~--f~~S 100 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGYT-NEPVLRLAKKLVDAT-F-------ADKVF--FCNS 100 (397)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCccC-CHHHHHHHHHHHhhC-C-------CCEEE--EeCC
Confidence 5688999988732122332 23444444445544211 11121 112234555555543 1 23566 8999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHH-HhhCCCC------------eeeeeecCCCCCCcChHhHH
Q 013839 126 GTGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNI-WRDAQIP------------ERTYHYYDPDSKSLDFAALM 186 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~-~~~~g~~------------~~~v~~~~~~~~~~d~e~l~ 186 (435)
|++|++.+..+..... +| ++|+..+-+|.+.... +...+.. +..++ ..|++.++
T Consensus 101 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~ 173 (397)
T TIGR03246 101 GAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-------YNDLAAAK 173 (397)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-------CCCHHHHH
Confidence 9999999975554331 23 6788888888766432 2322211 11111 13789999
Q ss_pred HHhhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEE
Q 013839 187 DDIKNAPDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCA 265 (435)
Q Consensus 187 ~~i~~~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 265 (435)
+.+. +++++|+++.++++.|... +.+.+++|.++|++||+++|.||+|.+++..+. .+....+ +... + +
T Consensus 174 ~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~---~~a~~~~-gv~p-D--i 243 (397)
T TIGR03246 174 ALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE---LYAYMHY-GVTP-D--I 243 (397)
T ss_pred HHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc---chhhhhc-CCCC-C--E
Confidence 9886 5688888887677777654 889999999999999999999999988865431 1222122 1111 2 2
Q ss_pred ecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 013839 266 QSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRK 345 (435)
Q Consensus 266 ~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 345 (435)
.++||.+| .|+++||+++ +++ +++.+.......+++.+++++.++.+.|+.. + .....++++++
T Consensus 244 ~t~~K~lg-gG~pigav~~---~~~----i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~-------~-~~~l~~~~~~~ 307 (397)
T TIGR03246 244 LTSAKALG-GGFPIGAMLT---TTE----IAAHLKVGTHGTTYGGNPLACAVAGKVLDLV-------N-TPELLAGVKQR 307 (397)
T ss_pred EEeehhhh-CCcceeEEEE---cHH----HHHhccCCCcCCCCCCCHHHHHHHHHHHHHH-------h-hccHHHHHHHH
Confidence 37899998 8999999974 777 7777754333445566777777777777532 1 13466778888
Q ss_pred HHHHHHHHHhhCCCC-CccccccCcceeEec--C----CCHHHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHH
Q 013839 346 RTTLRQNLEKLGSSL-NWEHITNQLGMFCFS--G----LTPYQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLA 413 (435)
Q Consensus 346 ~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~--~----~~~~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~ 413 (435)
.+++.+.|++++... .+....+.+.++.+. . ...+++..+ .++||.+.+.| |++.+ ..+++++++++
T Consensus 308 ~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~ 386 (397)
T TIGR03246 308 HDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAA-AEEGVIALIAGPNVVRFAPSLVISDDDIDEGL 386 (397)
T ss_pred HHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHH-HHCCeEEeecCCCEEEEeCCCCCCHHHHHHHH
Confidence 888888887764211 122233344333321 1 112334544 56899998754 77532 24899999999
Q ss_pred HHHHHHHHh
Q 013839 414 NAIHEVTRS 422 (435)
Q Consensus 414 ~~l~~~l~~ 422 (435)
++|.+++.+
T Consensus 387 ~~l~~~l~~ 395 (397)
T TIGR03246 387 ARFERAIEQ 395 (397)
T ss_pred HHHHHHHHH
Confidence 999998864
No 198
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.86 E-value=4.4e-20 Score=181.11 Aligned_cols=286 Identities=13% Similarity=0.103 Sum_probs=190.3
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHH--HhCCCCEEEEcCCCChhhHHHH---hhCCCCe
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQR--RFHPESHIYFPDPTWSNHHNIW---RDAQIPE 167 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~--~~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~ 167 (435)
...++|+.+++++ +.+ ++++. ++.|+++++.+++..+. ...+||+|++..+.|..+...+ +..|+++
T Consensus 48 ~~~~~r~~la~~~-g~~-----~~~v~--~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v 119 (402)
T TIGR02006 48 AVENARNQVAELI-GAD-----SREIV--FTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEV 119 (402)
T ss_pred HHHHHHHHHHHHh-CCC-----CCeEE--EeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEE
Confidence 4567788899887 332 55787 89999999988742221 2368999999999998765443 4568899
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. .+++.+|++.+++.+. ++++++++++++||||...+ +++|.++|+++|+++++|+++.. ...+.
T Consensus 120 ~~v~~--~~~~~~d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~-g~~~~-- 188 (402)
T TIGR02006 120 TYLPP--KSNGLIDLEELKAAIR---DDTILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSV-GKIPI-- 188 (402)
T ss_pred EEEcc--CCCCcCCHHHHHHhcC---CCCEEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhc-CCccc--
Confidence 99887 3456799999999987 56899999999999999876 55999999999999999999642 21111
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh-------hccccCCChhHHHHHHH
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA-------RAMYGSPPVHGILLVAT 320 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~q~~~~~ 320 (435)
.+ ....-++++.|..|.+|.+| +|++++ .++ ....+.... +....+++.....++..
T Consensus 189 ---~~----~~~~~D~~~~s~~K~~gp~G--~G~l~~---~~~----~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~ 252 (402)
T TIGR02006 189 ---NV----NELKVDLMSISGHKIYGPKG--IGALYV---RRK----PRVRLEALIHGGGHERGMRSGTLPTHQIVGMGE 252 (402)
T ss_pred ---Cc----cccCCCEEEEehhhhcCCCc--eEEEEE---ccC----CCCCCCceecCCCccCCccCCCccHHHHHHHHH
Confidence 11 11234678888889888556 677763 333 111111110 11123455555555555
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc------cCcceeEecCCCHHHHHHHhhhccEEEe
Q 013839 321 ILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT------NQLGMFCFSGLTPYQVDRLAKEFHIYMT 394 (435)
Q Consensus 321 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~ll~~~gI~i~ 394 (435)
+++.. .+..+...+++++.++.+.+.|++++. +.... +....+.+.+.+.+.+...+ .+|.+.
T Consensus 253 al~~~------~~~~~~~~~~~~~l~~~l~~~l~~~~~---v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~ 321 (402)
T TIGR02006 253 AFRIA------KEEMAQDTAHVLALRDRLLNGIKSIEE---VYLNGDLEHRVPGNLNVSFNYVEGESLIMAL--KDLAVS 321 (402)
T ss_pred HHHHH------HHhHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCccccCCCeEEEEEeCcCHHHHHHhc--CCEEEe
Confidence 55422 234666778888899999999987642 22221 11113445556655554333 366554
Q ss_pred CC-------------------------C--cEEeccC-CCCcHHHHHHHHHHHHHhhh
Q 013839 395 QD-------------------------G--RISMAGV-TTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 395 pg-------------------------g--Ris~~~~-~~e~i~~~~~~l~~~l~~~~ 424 (435)
.| | |+|+... |++|++++++.|+++++.+.
T Consensus 322 ~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 322 SGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred chhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 32 2 9998643 78999999999999887654
No 199
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.86 E-value=3.1e-19 Score=173.10 Aligned_cols=212 Identities=11% Similarity=0.106 Sum_probs=152.3
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhh----HHHHhhCCCCee
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNH----HNIWRDAQIPER 168 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~ 168 (435)
-..+|++.++++. +.. .+. ++++|+.|+.++ +.+++.+||+|+++.+.|... ...+...|++++
T Consensus 55 ~~~~le~~la~l~-g~~-------~~~--~~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~ 122 (380)
T TIGR01325 55 TVAAFEERIAALE-GAE-------RAV--ATATGMSAIQAA--LMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVS 122 (380)
T ss_pred hHHHHHHHHHHHh-CCC-------cEE--EECCHHHHHHHH--HHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEE
Confidence 3678999999887 331 334 689999999888 677789999999999888653 335567888888
Q ss_pred eeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCccc
Q 013839 169 TYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKD 248 (435)
Q Consensus 169 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~ 248 (435)
.++. .|++++++++. +++++|++++|+||+|...+ +++|.++|+++|+++|+|++|.......
T Consensus 123 ~v~~-------~d~~~l~~~i~---~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~---- 185 (380)
T TIGR01325 123 FVDP-------TDLNAWEAAVK---PNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ---- 185 (380)
T ss_pred EECC-------CCHHHHHHhcC---CCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC----
Confidence 7764 16888988886 57899999999999998865 6689999999999999999986543221
Q ss_pred HHHHHHhhhcCCeEEEEecccccccccCCcc-cEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhh
Q 013839 249 AQAIRIFLEDEHLIGCAQSYAKSMGLYGHRV-GCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNL 327 (435)
Q Consensus 249 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l 327 (435)
++ +. ..++++.|+||.++.+|.++ |+++ + +++ +++.+++.........+..... .++..-
T Consensus 186 --pl----~~-g~Divv~S~sK~l~g~g~~~gG~vv--~-~~~----~~~~l~~~~~~~g~~~~p~~a~---~~l~~l-- 246 (380)
T TIGR01325 186 --PL----KL-GADVVVYSATKHIDGQGRVMGGVIA--G-SEE----LMAEVAVYLRHTGPAMSPFNAW---VLLKGL-- 246 (380)
T ss_pred --ch----hh-CCCEEEeeccceecCCCCeEEEEEE--e-CHH----HHHHHHHHHHhhCCCCCHHHHH---HHHhcc--
Confidence 11 11 23688889999998888887 5553 3 777 6666665544433344444333 233322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 328 KSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.+....++..+++..+.+.|++++
T Consensus 247 -----~tl~~r~~~~~~~a~~la~~L~~~p 271 (380)
T TIGR01325 247 -----ETLSLRMQKQFDSALAIAEWLQAQP 271 (380)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3345566777778888888888775
No 200
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=4.4e-19 Score=171.83 Aligned_cols=213 Identities=14% Similarity=0.084 Sum_probs=149.6
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh---hCCCCee
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR---DAQIPER 168 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~ 168 (435)
....+|++.+++++... +++ ++++|+.|+.++ +.+++.+||+|+++.|+|..+...++ ..|+++.
T Consensus 53 p~~~~lE~~lA~l~g~~--------~~l--~~~sG~~Ai~~~--l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~ 120 (385)
T PRK08574 53 PTLRPLEEALAKLEGGV--------DAL--AFNSGMAAISTL--FFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVV 120 (385)
T ss_pred ccHHHHHHHHHHHhCCC--------cEE--EeCCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEE
Confidence 35678999999998432 344 689999998888 77788999999999999998876664 3455554
Q ss_pred eeeecCCCCCCcChHhHHHHhhcCCC-CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 169 TYHYYDPDSKSLDFAALMDDIKNAPD-SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 169 ~v~~~~~~~~~~d~e~l~~~i~~~~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
.+. +|++++++++. + +++++++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 121 ~~~--------~d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~---- 182 (385)
T PRK08574 121 LAY--------PSTEDIIEAIK---EGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY---- 182 (385)
T ss_pred EEC--------CCHHHHHHhcC---ccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----
Confidence 431 36788999887 4 7899999999999999887 458999999999999999997432211
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcc-cEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRV-GCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
. ++ . .+.++++.|++|.++.+|..+ |+++ +.+++ +.++++.........++.+..+.+...|+
T Consensus 183 ~--~l----~-~GaDivv~S~sK~l~g~~d~~gG~vi--~~~~~----~~~~~~~~~~~~g~~~~p~~a~l~l~~l~--- 246 (385)
T PRK08574 183 R--PL----R-HGADFVVHSLTKYIAGHNDVVGGVAV--AWSGE----FLEELWEWRRRLGTIMQPFEAYLVLRGLK--- 246 (385)
T ss_pred C--hh----h-hCCcEEEeeCceeecCCCCceeEEEE--ECcHH----HHHHHHHHHHhcCCCCCHHHHHHHHcccC---
Confidence 1 11 1 134789999999998677665 5554 44676 66666655443334455443333333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
.+....++..++...+.+.|+.++
T Consensus 247 -------tL~~R~~~~~~na~~la~~L~~~p 270 (385)
T PRK08574 247 -------TLEVRFERQCRNAMAIAEFLSEHP 270 (385)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 234445556667777778887664
No 201
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.86 E-value=5.5e-19 Score=173.48 Aligned_cols=337 Identities=10% Similarity=0.051 Sum_probs=199.4
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCC--CCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESI--SASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.+++..||+..|.-...-|. ..+.+++++.+++.......+. ...-..++-+.+++...... .+++. +++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~-----~~~~~--f~~ 108 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTGH-RHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSG-----QAKTA--FFT 108 (421)
T ss_pred CCCCEEEEccCchhhhcCCC-CCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCC-----CceEE--EeC
Confidence 46788999877742111121 2333444444444322111111 11111234444444321111 13566 889
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh-CCC-------------CeeeeeecCCCCCCc----ChHhHH
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD-AQI-------------PERTYHYYDPDSKSL----DFAALM 186 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~~~----d~e~l~ 186 (435)
+|++|++.+..+........+|+....+|.+....... .|. .+..+|..+.. .++ +++.++
T Consensus 109 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~ 187 (421)
T PRK09792 109 TGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIE 187 (421)
T ss_pred ChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHH
Confidence 99999999976665554446889888888776432211 111 12222221111 122 346777
Q ss_pred HHhhc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 187 DDIKN--APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 187 ~~i~~--~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
+.+.+ .+++.+++++...++|+|..+ +++.+++|.++|++||+++|+||++.+|...+ ..+....+...++
T Consensus 188 ~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~~~~~pD--- 261 (421)
T PRK09792 188 RLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG---KLFAMDHYADKPD--- 261 (421)
T ss_pred HHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHhcCCCCc---
Confidence 77763 134577888877799999876 89999999999999999999999999987754 2344444422233
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
+.++||.++ +|+|+||+++ +++ +.+.+.......+.+.+++++.++.+.++--+ + .+.+++. +
T Consensus 262 -i~t~gK~l~-~G~pigav~~---~~~----i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~--~--~~~~~~~----~ 324 (421)
T PRK09792 262 -LMTMAKSLA-GGMPLSGVVG---NAN----IMDAPAPGGLGGTYAGNPLAVAAAHAVLNIID--K--ESLCERA----N 324 (421)
T ss_pred -EEEeehhhc-CCCceEEEEE---cHH----HHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH--h--hhHHHHH----H
Confidence 578999999 8999999864 777 76665543334566778888886666553211 0 0222222 2
Q ss_pred HHHHHHHHHHHh----hCCCCCccccccCc-ceeEecCCC-----------HHHH-HHHhhhccEEEeCCC------cEE
Q 013839 344 RKRTTLRQNLEK----LGSSLNWEHITNQL-GMFCFSGLT-----------PYQV-DRLAKEFHIYMTQDG------RIS 400 (435)
Q Consensus 344 ~~~~~l~~~l~~----~~~~~~~~~~~~~~-g~~~~~~~~-----------~~~~-~~ll~~~gI~i~pgg------Ris 400 (435)
+..+.+.+.|+. ++. +....| |+++|+.+. ...+ ..+ .++||.+.+.| ||.
T Consensus 325 ~~g~~l~~~l~~l~~~~p~-----v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~g~~~~~irl~ 398 (421)
T PRK09792 325 QLGQRLKNTLIDAKESVPA-----IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRA-LAQGLLLLTCGAYGNVIRFL 398 (421)
T ss_pred HHHHHHHHHHHHHHHhCCC-----cceecccceEEEEEecCCccCCcchHHHHHHHHHH-HHCCcEEeecCCCCCEEEEe
Confidence 333333333332 331 223445 788887551 1223 444 46899997532 787
Q ss_pred ecc-CCCCcHHHHHHHHHHHHH
Q 013839 401 MAG-VTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 401 ~~~-~~~e~i~~~~~~l~~~l~ 421 (435)
++. .+++++++++++|.+++.
T Consensus 399 P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 399 YPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCCcCCHHHHHHHHHHHHHHHh
Confidence 654 589999999999998874
No 202
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.86 E-value=3.7e-19 Score=173.28 Aligned_cols=214 Identities=10% Similarity=0.020 Sum_probs=153.0
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCC----hhhHHHHhhCCCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTW----SNHHNIWRDAQIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y----~~~~~~~~~~g~~~ 167 (435)
....+|.+.++++.... +.+ .+++|+.|+..+ +.+++.+||+|+++...| ..+...++..|+++
T Consensus 70 p~~~~le~~lA~l~g~~--------~al--~~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v 137 (403)
T PRK07810 70 PTVSMFEERLRLIEGAE--------ACF--ATASGMSAVFTA--LGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVET 137 (403)
T ss_pred chHHHHHHHHHHHhCCC--------cEE--EECChHHHHHHH--HHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEE
Confidence 34678999999987432 333 699999998887 777789999999887554 44455667789988
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. .|+++++++++ +++++|++++|+||||.+.+ +++|+++|+++++++|+|++|.......
T Consensus 138 ~~vd~-------~d~~~l~~ai~---~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~--- 201 (403)
T PRK07810 138 VFVDG-------EDLSQWEEALS---VPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR--- 201 (403)
T ss_pred EEECC-------CCHHHHHHhcC---cCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence 88853 28899999987 67899999999999998874 6699999999999999999986544321
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcc-cEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRV-GCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
+. . .+.++++.|++|.++..|.++ |+++ + +++. +...++...+.....++.+.++.+...|+.
T Consensus 202 ---~~----~-~gaDivv~S~tK~l~g~g~~~gG~v~--~-~~~~---~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t-- 265 (403)
T PRK07810 202 ---GL----P-LGADVVVYSGTKHIDGQGRVLGGAIL--G-DREY---IDGPVQKLMRHTGPALSAFNAWVLLKGLET-- 265 (403)
T ss_pred ---hh----h-cCCcEEEccCCceecCCcCceeEEEE--e-ChHH---HHHHHHHHHHHhCCCCCHHHHHHHHhccCc--
Confidence 11 1 134788999999998889998 5554 4 5542 222344433344456677766665555543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+....++..++...+.+.|++++
T Consensus 266 --------l~~R~~~~~~~a~~~a~~L~~~p 288 (403)
T PRK07810 266 --------LALRVRHSNASALRIAEFLEGHP 288 (403)
T ss_pred --------HHHHHHHHHHHHHHHHHHHhcCC
Confidence 34455556666667777887665
No 203
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.1e-18 Score=164.05 Aligned_cols=278 Identities=17% Similarity=0.143 Sum_probs=199.8
Q ss_pred eEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhh--HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcE
Q 013839 120 GVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNH--HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSF 197 (435)
Q Consensus 120 ~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 197 (435)
..++.+|+.+++.+ +.+++.|||+|++...+..+. .++++.+|++++.+.. +++..+|++++++++++. +..+
T Consensus 59 ~ll~gsGt~amEAa--v~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~-~~~~ 133 (383)
T COG0075 59 VLLSGSGTLAMEAA--VASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEV--EWGEAVDPEEVEEALDKD-PDIK 133 (383)
T ss_pred EEEcCCcHHHHHHH--HHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcC-CCcc
Confidence 33678889999988 888999999999999877554 5789999999999987 677789999999999965 4677
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccc-cC
Q 013839 198 FLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGL-YG 276 (435)
Q Consensus 198 ~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~-~G 276 (435)
++.+.++..+||+..+ +++|+++|++||.++|+|.+ ..++-.+.+ + +...-++++.+..|+++. ||
T Consensus 134 ~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaV-sS~Gg~~~~-----v----d~wgiDv~itgSQK~l~~PPG 200 (383)
T COG0075 134 AVAVVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAV-SSLGGEPLK-----V----DEWGIDVAITGSQKALGAPPG 200 (383)
T ss_pred EEEEEeccCcccccCc---HHHHHHHHHHcCCEEEEEec-ccCCCcccc-----h----hhcCccEEEecCchhccCCCc
Confidence 8888898999999864 66999999999999999999 444433222 1 223456778888899865 45
Q ss_pred CcccEEEEEecChhHHHHHHH-----------HHHHHh---hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 013839 277 HRVGCLSILCVDSKQAAAIRS-----------QIQQIA---RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRI 342 (435)
Q Consensus 277 ~RvG~~~~~~~~~~~~~~~~~-----------~l~~~~---~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~ 342 (435)
+|.+.+ +++.++.+.+ .+.+++ ....+++|....+++..+|+.- .++.++...+|+
T Consensus 201 --la~v~~---S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i-----~~EGle~r~~RH 270 (383)
T COG0075 201 --LAFVAV---SERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLI-----LEEGLEARIARH 270 (383)
T ss_pred --cceeEE---CHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH-----HHhhHHHHHHHH
Confidence 566654 6665444321 112222 2334566766667777777543 236688999999
Q ss_pred HHHHHHHHHHHHhhCCCCCccc--ccc-CcceeEecCCCHHHH-HHHhhhccEEEeCC-----C---cEEe-ccCCCCcH
Q 013839 343 QRKRTTLRQNLEKLGSSLNWEH--ITN-QLGMFCFSGLTPYQV-DRLAKEFHIYMTQD-----G---RISM-AGVTTGNV 409 (435)
Q Consensus 343 ~~~~~~l~~~l~~~~~~~~~~~--~~~-~~g~~~~~~~~~~~~-~~ll~~~gI~i~pg-----g---Ris~-~~~~~e~i 409 (435)
+++.+.+++.++.+|+....+. ..+ -..++.-.+++.+.+ ..+++++|+.+.+| | ||+. +..+.+++
T Consensus 271 ~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv 350 (383)
T COG0075 271 RRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDV 350 (383)
T ss_pred HHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHH
Confidence 9999999999999996421100 000 011111115554333 46778889999987 2 9984 55688999
Q ss_pred HHHHHHHHHHHHhhhh
Q 013839 410 NYLANAIHEVTRSEQE 425 (435)
Q Consensus 410 ~~~~~~l~~~l~~~~~ 425 (435)
..++.+|..++.+++.
T Consensus 351 ~~~l~ale~~L~~~g~ 366 (383)
T COG0075 351 LAALAALEAALRELGV 366 (383)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999999988764
No 204
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.86 E-value=7e-19 Score=170.65 Aligned_cols=326 Identities=13% Similarity=0.080 Sum_probs=200.9
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCC---CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE---FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+.++|+.++|+.....+...+...+++++...+. ..-++...-+.+|-+++|+++... . ++++++|
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e--------~--all~sSG 171 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKE--------D--CLVCPTG 171 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCC--------c--EEEECCh
Confidence 47899999998665444444444444444433221 111222233467888888888322 2 3368899
Q ss_pred hhHHHHHHHHHHH--------------hCCCCEEEEcCCCChhhHHHHhhC----CCCeeeeeecCCCCCCcChHhHHHH
Q 013839 127 TGACRLFAEFQRR--------------FHPESHIYFPDPTWSNHHNIWRDA----QIPERTYHYYDPDSKSLDFAALMDD 188 (435)
Q Consensus 127 ~~a~~~~~~~~~~--------------~~~gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~e~l~~~ 188 (435)
..|...+ +.++ ..++|.|+...-.+......++.. +++++.++. .|+++|++.
T Consensus 172 y~AN~~~--i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~ 242 (476)
T PLN02955 172 FAANMAA--MVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSL 242 (476)
T ss_pred HHHHHHH--HHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHH
Confidence 8887776 3333 134456666666666666666655 355555542 288999999
Q ss_pred hhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecc
Q 013839 189 IKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSY 268 (435)
Q Consensus 189 i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 268 (435)
+++.+.+.++|++....++.|.+.+ +++|.++|++||+++|+||+|..+..+.. .......+.-..+.+|+++||
T Consensus 243 L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~--G~G~~e~~g~~~di~ii~~TL 317 (476)
T PLN02955 243 LSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGEN--GGGVAEEFNCEADVDLCVGTL 317 (476)
T ss_pred HHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCC--CCcHHHHhCCCCCCcEEEEeC
Confidence 8765555677887778899998877 66888899999999999999887766531 111222232235778999999
Q ss_pred cccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc-ccCCChh-HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 013839 269 AKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM-YGSPPVH-GILLVATILSDPNLKSLWIDEVKIMADRIQRKR 346 (435)
Q Consensus 269 SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~-~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 346 (435)
||++|..| |++++ +++ +++.++...+.. +.++.++ ...++.+++... ......++++.++.
T Consensus 318 sKA~G~~G---Gfi~g---s~~----~~~~l~~~~~~~ifStalpp~~aaa~laal~l~-------~~~~~~r~~L~~n~ 380 (476)
T PLN02955 318 SKAAGCHG---GFIAC---SKK----WKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVA-------RKEKWRRKAIWERV 380 (476)
T ss_pred ccchhccC---ceeec---HHH----HHHHHHHhCCCCeecccccHHHHHHHHHHHHHH-------hcCHHHHHHHHHHH
Confidence 99998777 99853 777 777777655532 2222222 222222333211 11124567777777
Q ss_pred HHHHHHHHhhCCCCCccccccCcce-eEecCCCH--HHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHH
Q 013839 347 TTLRQNLEKLGSSLNWEHITNQLGM-FCFSGLTP--YQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNY 411 (435)
Q Consensus 347 ~~l~~~l~~~~~~~~~~~~~~~~g~-~~~~~~~~--~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~ 411 (435)
+++++. .|+ .. ...+ .++++-.. ..+.+.|.++||.+.+. | ||+++. .+++||++
T Consensus 381 ~~fr~~---~G~----~~---~sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~ 450 (476)
T PLN02955 381 KEFKAL---SGV----DI---SSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKK 450 (476)
T ss_pred HHHHHh---cCC----CC---CCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHH
Confidence 777763 343 22 1222 23344422 23334445689999743 2 888754 48899999
Q ss_pred HHHHHHHHHHhhhhh
Q 013839 412 LANAIHEVTRSEQET 426 (435)
Q Consensus 412 ~~~~l~~~l~~~~~~ 426 (435)
++++|.++......+
T Consensus 451 lv~~L~~~~~~~~~~ 465 (476)
T PLN02955 451 LITALSSCLDFDNTA 465 (476)
T ss_pred HHHHHHHHHhhhcce
Confidence 999999987765543
No 205
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=4.1e-19 Score=170.62 Aligned_cols=275 Identities=13% Similarity=0.114 Sum_probs=179.3
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
....+|.++++++..+. +++ .++||++|+.++ + .++.+||+|+++.+.|......+.....+. .+.
T Consensus 54 p~~~~le~~lA~leg~~--------~~v--~~~sG~aAi~~~--l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~~~ 119 (364)
T PRK07269 54 PTRAKLEETLAAIESAD--------YAL--ATSSGMSAIVLA--F-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEG-RFH 119 (364)
T ss_pred ccHHHHHHHHHHHhCCC--------eEE--EeCCHHHHHHHH--H-HHhCCCCEEEEecCCcCchHHHHHHHHhcC-cEE
Confidence 45679999999998322 455 899999999887 4 457899999999999976654433221110 111
Q ss_pred ecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHH
Q 013839 172 YYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQA 251 (435)
Q Consensus 172 ~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~ 251 (435)
. .+..|+++++++++ +++++|++++|+||||.+. ++++|+++|+++|+++|+|++|....+. .+
T Consensus 120 ~----~~~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~------~p 183 (364)
T PRK07269 120 F----TYANTEEELIAAIE---EDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ------RP 183 (364)
T ss_pred E----EecCCHHHHHHhcC---cCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC------Cc
Confidence 1 13468999999997 6889999999999999776 6779999999999999999996432211 12
Q ss_pred HHHhhhcCCeEEEEecccccccccCCc-ccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHH
Q 013839 252 IRIFLEDEHLIGCAQSYAKSMGLYGHR-VGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSL 330 (435)
Q Consensus 252 ~~~~~~~~~~~i~~~s~SK~~g~~G~R-vG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~ 330 (435)
+. ..-.+++.|++|.++-+|-- .||++ +.+++ +.++++.........++.+..+.+..-|+
T Consensus 184 l~-----~gaDivv~S~tK~l~g~~d~~gG~v~--~~~~~----l~~~~~~~~~~~G~~~s~~~a~l~~~~L~------- 245 (364)
T PRK07269 184 IE-----LGADIVLHSATKYLSGHNDVLAGVVV--TNDLE----LYEKLFYNLNTTGAVLSPFDSYLLMRGLK------- 245 (364)
T ss_pred hh-----hCCcEEEecCceeccCCCcccceEEE--eCcHH----HHHHHHHHHHHhCCCCCHHHHHHHHcCCC-------
Confidence 21 12358899999999744432 36664 44566 55656544433334556665554444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhc-------------cEEEeCC-
Q 013839 331 WIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEF-------------HIYMTQD- 396 (435)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~-------------gI~i~pg- 396 (435)
.+....++.+++...+.+.|+.++.- ....+++.+|++.|.-.+.+.+.++++.- .+.+.|.
T Consensus 246 ---tL~~r~~~~~~na~~~a~~L~~~p~v-~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~ 321 (364)
T PRK07269 246 ---TLSLRMERSTANAQEVVAFLKKSPAV-KEVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTT 321 (364)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHhCCCc-cEEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcc
Confidence 34566667778888888888876521 12344777888777632333333332221 2232231
Q ss_pred --------------C------cEEeccCCCCcHHHHHHHHHHHHH
Q 013839 397 --------------G------RISMAGVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 397 --------------g------Ris~~~~~~e~i~~~~~~l~~~l~ 421 (435)
| |+|++- |+.+.+++-|.++++
T Consensus 322 ~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 322 QTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred cccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 1 888855 777888888877663
No 206
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=6.1e-19 Score=171.42 Aligned_cols=214 Identities=14% Similarity=0.116 Sum_probs=151.9
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH----HHhhCCCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN----IWRDAQIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~ 167 (435)
....+|.+.++++. +. ++++ +++||++|+.++ +.+++++||+|++++|+|..+.. .+...|+++
T Consensus 65 pt~~~Le~~lA~l~-g~-------~~~l--~~~sgt~Ai~~~--l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v 132 (394)
T PRK07050 65 PTSLALAQRLAEIE-GG-------RHAL--LQPSGLAAISLV--YFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITV 132 (394)
T ss_pred HHHHHHHHHHHHHh-CC-------CeEE--EeccHHHHHHHH--HHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEE
Confidence 34567888888876 32 2555 899999999988 77778999999999999988664 456778888
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. . +.+++++.++ +++++|++++|+||+| +..++++|+++|+++|+++|+|++|.......
T Consensus 133 ~~vd~---~----~~~~l~~~i~---~~tklV~le~p~Np~~---~~~di~~I~~ia~~~gi~livD~a~a~~~~~~--- 196 (394)
T PRK07050 133 RFYDP---L----IGAGIADLIQ---PNTRLIWLEAPGSVTM---EVPDVPAITAAARARGVVTAIDNTYSAGLAFK--- 196 (394)
T ss_pred EEECC---C----CHHHHHHhcC---CCCeEEEEECCCCCCc---cHhhHHHHHHHHHHcCCEEEEECCcccccccC---
Confidence 87753 1 3467888887 6789999999999996 57789999999999999999999985533211
Q ss_pred cHHHHHHhhhcCCeEEEEeccccccc-ccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMG-LYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
++ . ...++++.|++|.++ ..+.+.|+++ +.+++ ++++++........+.+....+.+...+.+
T Consensus 197 ---~l----~-~GaDi~v~S~tK~~~g~~~~~gG~v~--~~~~~----~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t-- 260 (394)
T PRK07050 197 ---PF----E-HGVDISVQALTKYQSGGSDVLMGATI--TADAE----LHAKLKLARMRLGIGVSADDCSLVLRGLPS-- 260 (394)
T ss_pred ---HH----H-cCCeEEEEECCceecCCCCeeEEEEE--ECCHH----HHHHHHHHHHhcCCCCCHHHHHHHHcCCCc--
Confidence 11 1 134789999999986 2334578875 44677 777776655544556666655444443432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+....++..++...+.+.|++.+
T Consensus 261 --------l~~Rl~~~~~~a~~la~~L~~~p 283 (394)
T PRK07050 261 --------LQVRLAAHDRSALEVAEWLKARP 283 (394)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 23344555555666777777654
No 207
>PRK14012 cysteine desulfurase; Provisional
Probab=99.85 E-value=9.7e-20 Score=178.91 Aligned_cols=287 Identities=14% Similarity=0.114 Sum_probs=182.6
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHH-H-HhCCCCEEEEcCCCChhhHHHH---hhCCCCe
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQ-R-RFHPESHIYFPDPTWSNHHNIW---RDAQIPE 167 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~-~-~~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~ 167 (435)
...++|+.+++++ +.+ +++++ +++|+++++.+++..+ . .+.+||+|++.+++|+.....+ +..|+++
T Consensus 50 ~~~~~r~~ia~~~-g~~-----~~~v~--~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~ 121 (404)
T PRK14012 50 AVDIARNQIADLI-GAD-----PREIV--FTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEV 121 (404)
T ss_pred HHHHHHHHHHHHc-CcC-----cCeEE--EeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEE
Confidence 3567788888887 332 45677 8999999998874222 1 1478999999999997765444 3469999
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. ++++.+|++.|+++++ ++++++++++++||||...+ +++|.++|+++|+++|+|+++.. ...+.
T Consensus 122 ~~v~~--~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~-g~~~~-- 190 (404)
T PRK14012 122 TYLDP--QSNGIIDLEKLEAAMR---DDTILVSIMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV-GKVPI-- 190 (404)
T ss_pred EEEcc--CCCCcCCHHHHHHhcC---CCCEEEEEECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc-CCccc--
Confidence 99887 3456789999999997 67899999999999999876 56999999999999999999642 21111
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHH-h-----h-ccccCCChhHHHHHHH
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI-A-----R-AMYGSPPVHGILLVAT 320 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-~-----~-~~~~~~~~~~q~~~~~ 320 (435)
++ ...+-.+++.|++|.+| |+ ++|++++ +++ ....+... . . ....+++.....++.+
T Consensus 191 ---~~----~~~~~D~~~~s~~K~~g-p~-g~G~l~~---~~~----~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~ 254 (404)
T PRK14012 191 ---DL----SKLKVDLMSFSAHKIYG-PK-GIGALYV---RRK----PRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGE 254 (404)
T ss_pred ---Cc----ccCCCCEEEEehhhccC-CC-ceEEEEE---ecC----CCCCCCceecCCCccCCccCCCcCHHHHHHHHH
Confidence 11 11234567779999887 43 5788864 333 11111110 0 0 1112233333333334
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc-----ccCcceeEecC-CCHHHHHHHhhhccEEEe
Q 013839 321 ILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI-----TNQLGMFCFSG-LTPYQVDRLAKEFHIYMT 394 (435)
Q Consensus 321 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-----~~~~g~~~~~~-~~~~~~~~ll~~~gI~i~ 394 (435)
++.... .......++.++.++++.+.|+++.. +... .....+++++. .+.+.+...++ ++.+.
T Consensus 255 al~~~~------~~~~~~~~~~~~l~~~l~~~L~~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~i~ 323 (404)
T PRK14012 255 AARIAK------EEMATENERIRALRDRLWNGIKDIEE---VYLNGDLEQRVPGNLNVSFNYVEGESLIMALK--DLAVS 323 (404)
T ss_pred HHHHHH------hhHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCccccCCCEEEEEEeCcCHHHHHHhCC--CeEEE
Confidence 443211 23445667778888888888876541 2221 11122334443 34444444444 44433
Q ss_pred CC-------------------------C--cEEecc-CCCCcHHHHHHHHHHHHHhhhh
Q 013839 395 QD-------------------------G--RISMAG-VTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 395 pg-------------------------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
.| + |+++.. .++++++++++.|+++++.+..
T Consensus 324 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 324 SGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRE 382 (404)
T ss_pred chhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 22 2 888764 4789999999999999877643
No 208
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.85 E-value=5.8e-19 Score=174.99 Aligned_cols=348 Identities=13% Similarity=0.054 Sum_probs=198.2
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCC--CCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLE--SISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.++...||+..|.-...-| ...+.+++++.+++....... +....-..++-+.+++...+.. .+.+. +++
T Consensus 51 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~-----~~~v~--f~~ 122 (451)
T PRK06918 51 VDGNQYIDFAGAIGTINVG-HSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSF-----DKKVL--FLN 122 (451)
T ss_pred CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCC-----CCEEE--EcC
Confidence 3667889988875211112 122334444445544221110 0011112334444444331110 13666 899
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhC-CC-------------CeeeeeecCCC--CCCcC-------
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDA-QI-------------PERTYHYYDPD--SKSLD------- 181 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~--~~~~d------- 181 (435)
+|++|++.+..+........+|+....+|.+........ +- .+..+|..+.. ..++.
T Consensus 123 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (451)
T PRK06918 123 SGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDF 202 (451)
T ss_pred CcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHH
Confidence 999999999866665544477888888887775433221 10 01122221000 01111
Q ss_pred -hHhHHHHhhc--CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhh
Q 013839 182 -FAALMDDIKN--APDSSFFLLHPSAHNPTGVDPT-EEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE 257 (435)
Q Consensus 182 -~e~l~~~i~~--~~~~~~~v~~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~ 257 (435)
++.+++.+.. .+++..++++...+.-.|.+++ .+.+++|.++|++||+++|+||+|.++...+ ..++...+..
T Consensus 203 ~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g---~~~a~~~~~v 279 (451)
T PRK06918 203 MIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG---KYFAIEHFDV 279 (451)
T ss_pred HHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC---ceehhHhcCC
Confidence 1234433321 2245666666544444476554 5559999999999999999999999997754 1223333321
Q ss_pred cCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 013839 258 DEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKI 337 (435)
Q Consensus 258 ~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~ 337 (435)
..+ +.|+||.++ +|+|+||+++ +++ +++.+.......+.+.+.++|.++.+.|+.-. . ..
T Consensus 280 ~pD----i~t~sK~l~-~G~pig~v~~---~~~----i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~-~-------~~ 339 (451)
T PRK06918 280 VPD----LITVSKSLG-AGVPISGVIG---RKE----IMDESAPGELGGTYAGSPLGCAAALAVLDIIE-K-------EN 339 (451)
T ss_pred CCC----EEeeehhhc-CCCccEEEEE---cHH----HHhccCCCCcCcCCCcCHHHHHHHHHHHHHHH-H-------CC
Confidence 222 448999999 9999999974 777 77766544445667888898888777664210 0 11
Q ss_pred HHHHHHHHHHHHHHHHHhh--CCCCCccccccCcceeEecCC--------CH---HHHHHHhhhccEEEeCCC------c
Q 013839 338 MADRIQRKRTTLRQNLEKL--GSSLNWEHITNQLGMFCFSGL--------TP---YQVDRLAKEFHIYMTQDG------R 398 (435)
Q Consensus 338 ~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~g~~~~~~~--------~~---~~~~~ll~~~gI~i~pgg------R 398 (435)
..++.++..+.+.+.|+++ ..+ .+....+.|+++.|.-. +. +.+...+.++||.+.|++ |
T Consensus 340 ~~~~~~~~g~~l~~~l~~l~~~~~-~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lr 418 (451)
T PRK06918 340 LNDRAIELGKVVMNRFEEMKNKYN-CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIR 418 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCC-CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEE
Confidence 2222333333344444332 111 12234567887776532 12 223333356899999863 8
Q ss_pred EEecc-CCCCcHHHHHHHHHHHHHhhhhh
Q 013839 399 ISMAG-VTTGNVNYLANAIHEVTRSEQET 426 (435)
Q Consensus 399 is~~~-~~~e~i~~~~~~l~~~l~~~~~~ 426 (435)
|+++. .+++++++++++|.++++++.++
T Consensus 419 l~p~l~~t~~~id~~l~~l~~~l~~~~~~ 447 (451)
T PRK06918 419 VLMPLVITDEQLEEGLTIIEESLQACYEK 447 (451)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHHHHh
Confidence 88754 58999999999999999877654
No 209
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=8.5e-19 Score=172.16 Aligned_cols=343 Identities=13% Similarity=0.074 Sum_probs=210.9
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCC--CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLES--ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.++...+|+..|.-...-|.. .+++++++.+++.......+ .+.....++-+.+++...... .+++. +++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~-----~~~~~--f~~ 108 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNTGHR-HPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDG-----PAKTA--FFT 108 (421)
T ss_pred CCCCEEEEcccCHHhhccCCC-CHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCC-----CceEE--EeC
Confidence 366888998877421111211 22344444444442211111 111222344444444431111 23666 889
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh-CCCC-------------eeeeeecCCCCCC----cChHhHH
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD-AQIP-------------ERTYHYYDPDSKS----LDFAALM 186 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~~-------------~~~v~~~~~~~~~----~d~e~l~ 186 (435)
+|++|++.+..+........+|+....+|.+....... .+.. +..++.. ....+ -+++.++
T Consensus 109 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~l~ 187 (421)
T PRK06777 109 TGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYP-NELHGVSVEEALSSVE 187 (421)
T ss_pred CcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCC-ccccCcCHHHHHHHHH
Confidence 99999999976665554446788888888777543322 1210 1111211 10111 2356677
Q ss_pred HHhhc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 187 DDIKN--APDSSFFLLHPSAHNPTGV-DPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 187 ~~i~~--~~~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
+.+.+ .+++..++++...+++.|. ..+++.+++|.++|++||+++|.||+|.++...+ ..+....+ +....+
T Consensus 188 ~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g---~~~~~~~~-~~~pDi- 262 (421)
T PRK06777 188 RLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG---KLFAMEYY-DVKPDL- 262 (421)
T ss_pred HHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC---chhhhhhc-CCCCCE-
Confidence 77753 3356788888877888886 5789999999999999999999999999887654 22333333 222222
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
-++||.++ +|+|+||+++ +++ +++.+.......+.+.+.+++.++.+.|+... + +...++++
T Consensus 263 --v~~sK~l~-~G~pigav~~---~~~----i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~------~--~~l~~~~~ 324 (421)
T PRK06777 263 --ITMAKSLG-GGMPISAVVG---RAE----VMDAPAPGGLGGTYAGNPLAVAAALAVLDVIA------E--EKLCQRAL 324 (421)
T ss_pred --Eeeehhhc-CCCceEEEEE---cHH----HHhccCCCCCCCCCCcCHHHHHHHHHHHHHHH------h--ccHHHHHH
Confidence 26999999 9999999974 777 77766654445567788999999888885321 1 35666777
Q ss_pred HHHHHHHHHHHhhCCC-CCccccccCcceeEe-cCC------CHHH---HHHHhhhccEEEeCCC------cEEec-cCC
Q 013839 344 RKRTTLRQNLEKLGSS-LNWEHITNQLGMFCF-SGL------TPYQ---VDRLAKEFHIYMTQDG------RISMA-GVT 405 (435)
Q Consensus 344 ~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~-~~~------~~~~---~~~ll~~~gI~i~pgg------Ris~~-~~~ 405 (435)
++.+++.+.|+++... ..+....+.|.++.+ +.. +.++ +...+.++||.+.|++ ||++. ..+
T Consensus 325 ~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~ 404 (421)
T PRK06777 325 ILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIP 404 (421)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCC
Confidence 7778888777765210 013345677777764 221 1222 2222356899999864 88763 348
Q ss_pred CCcHHHHHHHHHHHHH
Q 013839 406 TGNVNYLANAIHEVTR 421 (435)
Q Consensus 406 ~e~i~~~~~~l~~~l~ 421 (435)
++++++++++|.+++.
T Consensus 405 ~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 405 DAQFSKALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988864
No 210
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.85 E-value=3.8e-19 Score=175.15 Aligned_cols=339 Identities=14% Similarity=0.050 Sum_probs=208.1
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++...+|+..|.+...-|. .++.+++++.+++... ...|.+..+..+|.+.+++...+ .+.+. ++++|
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~~~-~~~~~~~~~~~~la~~L~~~~~~-------~~~v~--~~~sG 115 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAEKG-LSFGAPTELEVELAELVIELVPS-------IEMVR--MVNSG 115 (426)
T ss_pred CCCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHHhC-CcCCCCCHHHHHHHHHHHHhCCC-------CCEEE--EecCH
Confidence 36789999999864221222 3345555555565543 23345556666777777776522 23666 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhC-C------------CCeeeee---ecCCCCCCcChHhHHHHhh
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDA-Q------------IPERTYH---YYDPDSKSLDFAALMDDIK 190 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~---~~~~~~~~~d~e~l~~~i~ 190 (435)
++|++.+..+......+++|+..+++|.++...+... | .....++ ...+ -.|++.+++.+.
T Consensus 116 seA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~i~ 192 (426)
T PRK00062 116 TEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP---YNDLEAVEELFE 192 (426)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC---CCCHHHHHHHHH
Confidence 9999999655444445689999999999886432211 1 0000000 0001 137889988886
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccc
Q 013839 191 NAPDSSFFLLHPSAHNPTGVDPT-EEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYA 269 (435)
Q Consensus 191 ~~~~~~~~v~~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S 269 (435)
+.+.++.+|++.....-+|.+.+ .+.+++|.++|++||+++|+||+|.++..+. ......+ +.... +.++|
T Consensus 193 ~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~----~~~~~~~-~~~pD---i~~~g 264 (426)
T PRK00062 193 EYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL----GGAQGYY-GVTPD---LTTLG 264 (426)
T ss_pred hCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC----ccHHHHh-CCCcc---hHhhh
Confidence 54456777777654455888875 7889999999999999999999998774432 1122112 21111 46899
Q ss_pred ccccccCCcccEEEEEecChhHHHHHHHHHHHH---hhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 013839 270 KSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI---ARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKR 346 (435)
Q Consensus 270 K~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 346 (435)
|.++ .|+++|++++ +++ +++.+... ....+.+.+.+.+.++.+.|+.-. + .+..++.++.....+
T Consensus 265 K~l~-~G~p~ga~~~---~~~----i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~--~--~~~~~~~~~~~~~~~ 332 (426)
T PRK00062 265 KIIG-GGLPVGAFGG---RRE----IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLK--E--PGFYEELEALTKRLA 332 (426)
T ss_pred hHhh-CCCcceeeeE---HHH----HHHhhccCCCceecccCcCCHHHHHHHHHHHHHHh--c--chHHHHHHHHHHHHH
Confidence 9999 8999999864 777 77766421 122345677788887777775321 0 012333333333344
Q ss_pred HHHHHHHHhhCCCCCccccccCcceeEec-CC------------C---HHHHHHHhhhccEEEeCCC----cEEeccCCC
Q 013839 347 TTLRQNLEKLGSSLNWEHITNQLGMFCFS-GL------------T---PYQVDRLAKEFHIYMTQDG----RISMAGVTT 406 (435)
Q Consensus 347 ~~l~~~l~~~~~~~~~~~~~~~~g~~~~~-~~------------~---~~~~~~ll~~~gI~i~pgg----Ris~~~~~~ 406 (435)
+.|.+.+++++.. ....+.|.++.+. .. + ...+...+.++||.+.|.+ ++++. .++
T Consensus 333 ~~l~~~~~~~~~~---~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~~~~~~~-~t~ 408 (426)
T PRK00062 333 EGLKEAAKKAGIP---LTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQFEAGFVSAA-HTD 408 (426)
T ss_pred HHHHHHHHHcCCc---eEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCcCceeeecc-CCH
Confidence 4444444444531 1133455555432 11 1 1234444456899998865 77754 489
Q ss_pred CcHHHHHHHHHHHHHhh
Q 013839 407 GNVNYLANAIHEVTRSE 423 (435)
Q Consensus 407 e~i~~~~~~l~~~l~~~ 423 (435)
+++++++++|+++++++
T Consensus 409 ~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 409 EDIEKTLEAARKAFAAL 425 (426)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988653
No 211
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.85 E-value=1.1e-18 Score=171.59 Aligned_cols=344 Identities=11% Similarity=-0.001 Sum_probs=197.8
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCC--CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLES--ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.+++..||+..|.-...-|.. .+++++++.+++.......+ .+.....++-+.+++...+.. .+.+. +++
T Consensus 30 ~dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~-----~~~v~--f~~ 101 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIGHS-HPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSG-----PKKSV--FFN 101 (420)
T ss_pred CCCCEEEECccCHHhccCCCC-CHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCC-----CCEEE--EeC
Confidence 356788999887421111212 23445555555543211111 111112244444444432111 23666 899
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhC-C--------C-----CeeeeeecCCCC---------CCcC
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDA-Q--------I-----PERTYHYYDPDS---------KSLD 181 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g--------~-----~~~~v~~~~~~~---------~~~d 181 (435)
+|++|++.+..+........+|+....+|.+........ + . .+..++..+... +.-+
T Consensus 102 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (420)
T TIGR00700 102 SGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGE 181 (420)
T ss_pred CcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHH
Confidence 999999999766655544477888888887764332221 1 1 111122200000 0012
Q ss_pred hHhHHHHhh--cCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhc
Q 013839 182 FAALMDDIK--NAPDSSFFLLHPSAHNPTGVDPTE-EQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLED 258 (435)
Q Consensus 182 ~e~l~~~i~--~~~~~~~~v~~~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 258 (435)
++.+++.+. ..+++..+|++...+.-+|..++. +.+++|.++|++||+++|+||+|.+|.+.+ ..+....+ +.
T Consensus 182 ~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g---~~~a~~~~-~~ 257 (420)
T TIGR00700 182 LAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG---AMFACEHE-GP 257 (420)
T ss_pred HHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---hhHHHhhc-CC
Confidence 456666653 234567888887777778887754 459999999999999999999999987654 12233222 11
Q ss_pred CCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 013839 259 EHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIM 338 (435)
Q Consensus 259 ~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~ 338 (435)
... +.++||.++ +|+|+||+++ +++ +++.+.......+.+.+.++|.++.+.|+.-. .+.+.+.+++.
T Consensus 258 ~pD---i~~lsK~l~-~G~pig~v~~---~~~----i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~ 325 (420)
T TIGR00700 258 EPD---LITTAKSLA-DGLPLSGVTG---RAE----IMDAPAPGGLGGTYAGNPLACAAALAVLAIIE-SEGLIERARQI 325 (420)
T ss_pred CCC---EEEeecccc-CCcceEEEEe---cHH----HHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHH-hccHHHHHHHH
Confidence 112 345999999 9999999975 787 77766544445567788888888877664211 00112222233
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC--------CHH---HHHHHhhhccEEEeCCC------cEEe
Q 013839 339 ADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL--------TPY---QVDRLAKEFHIYMTQDG------RISM 401 (435)
Q Consensus 339 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~--------~~~---~~~~ll~~~gI~i~pgg------Ris~ 401 (435)
.++++ +.+.+..+.++. +....+. |.+.|+.+ +.+ .+...+.++||.+.|++ ||++
T Consensus 326 g~~l~---~~L~~l~~~~~~---~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p 398 (420)
T TIGR00700 326 GRLVT---DRLTTLKAVDPR---IGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLP 398 (420)
T ss_pred HHHHH---HHHHHHHhhCCC---EEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEEC
Confidence 22222 222222222331 2334455 55555533 112 22222357899999863 8887
Q ss_pred cc-CCCCcHHHHHHHHHHHHH
Q 013839 402 AG-VTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 402 ~~-~~~e~i~~~~~~l~~~l~ 421 (435)
+. .+++++++++++|.+++.
T Consensus 399 ~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 399 PLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CCCcCHHHHHHHHHHHHHHhh
Confidence 53 588999999999998874
No 212
>PLN02624 ornithine-delta-aminotransferase
Probab=99.85 E-value=2.1e-18 Score=171.49 Aligned_cols=335 Identities=11% Similarity=0.043 Sum_probs=203.6
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCC-CCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLE-SISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.++...+|+..|.-...-| ...+++++++.+++....... +-......+|.+.++++. +. +.+. ++++
T Consensus 72 ~dG~~ylD~~sg~~~~~~G-h~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~-~~-------~~~~--f~~S 140 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVNQG-HCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF-GY-------DMVL--PMNT 140 (474)
T ss_pred CCCCEEEEcccchhcccCC-CCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc-CC-------CeEE--EeCC
Confidence 3567788887764211111 113344444445544211111 112233456777777664 22 3566 8999
Q ss_pred chhHHHHHHHHHHHhC-------CCC-EEEEcCCCChhhHHHHhhCCCC-------------eeeeeecCCCCCCcChHh
Q 013839 126 GTGACRLFAEFQRRFH-------PES-HIYFPDPTWSNHHNIWRDAQIP-------------ERTYHYYDPDSKSLDFAA 184 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~-------~gd-~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~e~ 184 (435)
|++|++.+..+..... +++ +|+...-+|.+..........+ +..++. .|++.
T Consensus 141 GseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 213 (474)
T PLN02624 141 GAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDA 213 (474)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHH
Confidence 9999999976554431 233 5777777776653322211111 111111 26789
Q ss_pred HHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 185 LMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQ-WREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 185 l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
+++.++..++++++|++..++||+|.++++++ +++|.++|++||+++|+||+|.+++..+ ...... ..+....+
T Consensus 214 l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG---~~~a~~-~~~i~pDi- 288 (474)
T PLN02624 214 LEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTG---KMLACD-WEEVRPDV- 288 (474)
T ss_pred HHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCc---chhhHH-hcCCCCCE-
Confidence 99988765567899999999999999987774 9999999999999999999998776543 112221 11222222
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
.++||.+|..++++|++++ +++ ++..+.......+++.+.+.+.++.+.|+.-. + ....++..
T Consensus 289 --v~lsK~lggG~~pigav~~---~~~----i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~------~--~~l~~~~~ 351 (474)
T PLN02624 289 --VILGKALGGGVIPVSAVLA---DKD----VMLCIKPGEHGSTFGGNPLASAVAMAALQVVQ------D--EKLAERSA 351 (474)
T ss_pred --EEecccccCCCCcceeeee---cHH----HHhHhccCCcCCCCCCCHHHHHHHHHHHHHHH------h--chHHHHHH
Confidence 3368999977799999974 667 76666544434555678888888888775321 1 12334455
Q ss_pred HHHHHHHHHHHhhC--CCCCccccccCcceeEe-cCCC------H-HHHHHHhhhccEEEeCCC----cEEe-ccCCCCc
Q 013839 344 RKRTTLRQNLEKLG--SSLNWEHITNQLGMFCF-SGLT------P-YQVDRLAKEFHIYMTQDG----RISM-AGVTTGN 408 (435)
Q Consensus 344 ~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~-~~~~------~-~~~~~ll~~~gI~i~pgg----Ris~-~~~~~e~ 408 (435)
++.+.+.+.|+.+. .+..+....+.+.++.+ ++.. . ++... +.++||.+.|++ ||++ ...++++
T Consensus 352 ~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~-L~e~GV~v~p~~~~~lR~~p~l~~t~e~ 430 (474)
T PLN02624 352 KLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLK-LKERGLLAKPTHDTIIRLAPPLSISEDE 430 (474)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHH-HHhCCeEEecCCCCEEEEECCccCCHHH
Confidence 55566666665542 11112234455555442 3321 1 23444 467999999875 8875 2348999
Q ss_pred HHHHHHHHHHHHHh
Q 013839 409 VNYLANAIHEVTRS 422 (435)
Q Consensus 409 i~~~~~~l~~~l~~ 422 (435)
+++++++|+++++.
T Consensus 431 id~~l~~L~~~l~~ 444 (474)
T PLN02624 431 LQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998864
No 213
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.85 E-value=1.4e-18 Score=168.57 Aligned_cols=326 Identities=12% Similarity=0.069 Sum_probs=193.9
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCC------CCCCCC----CCcccHHHHHHHHHhHcCCCCccccCCCee
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS------EFLESI----SASVSTKMVEESVKLVYGKDSDVVKEGRSA 119 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~----~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~ 119 (435)
.+.++|+.++|++....+.+.+.+.+++...... ...+.. ...-+.++++.+++++... +.+
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-------~~l- 75 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-------EAF- 75 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-------eEE-
Confidence 5789999999988877777777666666655210 011122 3334678899999988332 123
Q ss_pred eEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC---CCCc
Q 013839 120 GVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA---PDSS 196 (435)
Q Consensus 120 ~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~ 196 (435)
+.++|..++..+ ...+..+||.|++..-.+......++......+.++ ..|+++|++.+++. .+.+
T Consensus 76 --~~~sG~~a~~~~--~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 76 --IVPSGYMANLGL--CAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred --EECChHHHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence 455555565433 333345778777766666555555555433333332 24889999988742 1345
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccC
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYG 276 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G 276 (435)
.++++++++|+||.+.+ +++|.++|+++|+++++|++|....++. +...........+..+.+.|+||.+|..|
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~---~g~g~~~~~~~~~~~~~~~tlsK~~g~~G 218 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGD---DGKGFCHSLGYENFYAVLVTYSKALGSMG 218 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCC---CCCchHHhhCCCCCcEEEEechhhhhcCc
Confidence 67788999999999987 5588899999999999999986533321 11111111111223467899999999777
Q ss_pred CcccEEEEEecChhHHHHHHHHHHHHhh--ccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 277 HRVGCLSILCVDSKQAAAIRSQIQQIAR--AMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLE 354 (435)
Q Consensus 277 ~RvG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 354 (435)
. .++ + .++ +...+..... ....+.+.+...++..++..- .+..+..++++++.++++.+.|.
T Consensus 219 ~---~vl--~-~~~----~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l------~~~~~~~~~~l~~l~~~l~~~l~ 282 (370)
T PRK05937 219 A---ALL--S-SSE----VKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFL------SQEGELARKQLFRLKEYFAQKFS 282 (370)
T ss_pred e---EEE--c-CHH----HHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHH------HhCcHHHHHHHHHHHHHHHHhcC
Confidence 3 232 3 555 4444432111 112234445444444444211 01113345667777777777664
Q ss_pred hhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCC-----C--cEEecc-CCCCcHHHHHHHHHHHHHhhh
Q 013839 355 KLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQD-----G--RISMAG-VTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 355 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pg-----g--Ris~~~-~~~e~i~~~~~~l~~~l~~~~ 424 (435)
..+. .. ...+.+.+...+.+.+.|+++||.+... + |+|+.. .+++|++++++.|++++++..
T Consensus 283 ~~~~----~~----~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 283 SAAP----GC----VQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred CCCC----CC----EEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 3210 00 0112223445555666667789988632 2 999853 388999999999999987653
No 214
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=1.8e-18 Score=166.78 Aligned_cols=219 Identities=12% Similarity=0.059 Sum_probs=156.2
Q ss_pred CCCCCC--cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHH---
Q 013839 86 LESISA--SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIW--- 160 (435)
Q Consensus 86 ~~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~--- 160 (435)
..|... .....|+++++++..+. ++. ++.||++|+.++ +.+++++||+|++++|.|.++...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~~~--------~~~--~~~sG~~Ai~~~--l~all~~GD~Vvv~~~~Y~~t~~l~~~~ 120 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEGGA--------GTA--LYPSGAAAISNA--LLSFLKAGDHLLMVDSCYEPTRDLCDKI 120 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhCCC--------cEE--EECCHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHh
Confidence 346652 34469999999886332 445 899999999988 7778999999999999998776543
Q ss_pred -hhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCC
Q 013839 161 -RDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQG 239 (435)
Q Consensus 161 -~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~ 239 (435)
...|+++..++. . +.+.+++.+. +++++|++++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 121 l~~~Gi~v~~v~~---~----~~e~l~~~l~---~~TklV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 121 LKGFGIETTYYDP---M----IGEGIRELIR---PNTKVLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhcceEEEEECC---C----CHHHHHHhcC---cCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 456777665542 1 4577888886 679999999999999765 6788999999999999999999864
Q ss_pred ccCCCCcccHHHHHHhhhcCCeEEEEecccccc-cccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHH
Q 013839 240 FASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM-GLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLV 318 (435)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~ 318 (435)
...- . ++ ...-++++.|.+|.+ |..+...|+++ . +++ +.+.+..........+++...+.+
T Consensus 188 p~~~----~--Pl-----~~GaDivv~S~tK~l~Gh~d~~~G~~~--~-~~~----~~~~l~~~~~~~G~~~~p~~a~l~ 249 (394)
T PRK09028 188 PINS----R--PF-----EMGVDISIQAATKYIVGHSDVMLGTAT--A-NEK----HWDQLREHSYLMGQCTSPDDVYLA 249 (394)
T ss_pred cccC----C--cc-----ccCceEEEEeCCeEecCCCCEEEEEEE--C-CHH----HHHHHHHHHHhcCCCCCHHHHHHH
Confidence 3211 1 11 124579999999998 43445556553 3 666 555555444444455666655555
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 319 ATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 319 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
..-|+ .+....++..++...+.+.|++++
T Consensus 250 ~rgl~----------TL~lR~~~~~~na~~la~~L~~~p 278 (394)
T PRK09028 250 MRGLR----------TLGVRLAQHEKNALKVANWLATRP 278 (394)
T ss_pred HcccC----------cHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44443 345666778888888889998876
No 215
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=1.8e-18 Score=167.94 Aligned_cols=189 Identities=11% Similarity=0.063 Sum_probs=134.2
Q ss_pred hHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEc
Q 013839 71 QCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFP 149 (435)
Q Consensus 71 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~ 149 (435)
+..+.+.+.+..+ ...++ ....+|++++++++... +++ .++||++|+.++ +.++ +.+||+|+++
T Consensus 15 ~e~~~~~~~l~~~-~~~~g--~~~~~le~~la~~~g~~--------~~v--~~~sgt~al~la--l~al~~~~Gd~Viv~ 79 (379)
T PRK11658 15 EELAAVKEVLRSG-WITTG--PKNQALEQAFCQLTGNQ--------HAI--AVSSATAGMHIT--LMALGIGPGDEVITP 79 (379)
T ss_pred HHHHHHHHHHHcC-CccCC--HhHHHHHHHHHHHhCCC--------eEE--EECCHHHHHHHH--HHHcCCCCCCEEEEC
Confidence 3344444444443 22233 34789999999998332 334 689999999988 6666 7899999999
Q ss_pred CCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCc
Q 013839 150 DPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGH 229 (435)
Q Consensus 150 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 229 (435)
+|+|..+...+...|++++.+++ +.+++.+|++++++++. +++++++ |+||+|... ++++|.++|++||+
T Consensus 80 ~~~~~~~~~~~~~~G~~~v~vd~-~~~~~~~d~~~l~~~i~---~~tkav~---~~~~~G~~~---d~~~i~~~a~~~gi 149 (379)
T PRK11658 80 SLTWVSTLNMIVLLGATPVMVDV-DRDTLMVTPEAIEAAIT---PRTKAII---PVHYAGAPA---DLDAIRAIGERYGI 149 (379)
T ss_pred CCcHHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHhcc---cCCeEEE---EeCCCCCcC---CHHHHHHHHHHcCC
Confidence 99999998888999999999998 45667899999999997 6788876 577899865 46689999999999
Q ss_pred eeeeeccCCC-ccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHH
Q 013839 230 FPFFDMAYQG-FASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQ 301 (435)
Q Consensus 230 ~vi~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~ 301 (435)
++|+|+++.. ..+.+. .+ ...+. .+.||++.-.+++.+.|+++ +.+++ +.++++.
T Consensus 150 ~vi~D~a~a~g~~~~~~-----~~---g~~g~---~~~Sf~~~K~l~~g~GG~v~--~~~~~----~~~~~~~ 205 (379)
T PRK11658 150 PVIEDAAHAVGTYYKGR-----HI---GARGT---AIFSFHAIKNITCAEGGLVV--TDDDE----LADRLRS 205 (379)
T ss_pred eEEEECCCccCCeECCe-----ec---CCCCC---EEEeCCCCCcCcccCceEEE--ECCHH----HHHHHHH
Confidence 9999999763 333221 11 11122 34556544444666778875 54677 5555554
No 216
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.84 E-value=2.4e-18 Score=163.27 Aligned_cols=325 Identities=17% Similarity=0.166 Sum_probs=214.6
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcC---CCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG---SEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
+..++||+.++|......+...+.+.++++.... +.-.-++...-+.+|-+.+|+|+ +.. . +++..+
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~-g~e-------~--al~f~S 107 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL-GAE-------A--ALLFSS 107 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh-CCC-------c--EEEEcc
Confidence 5789999999995554444444444444444321 11222444455678888888887 432 2 336788
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHP 202 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~ 202 (435)
|-.|+..+ +.+++.+||.|+...-.+-...+.++..+++.+.+.. .|++.|++.+.+. +.+.++|++.
T Consensus 108 Gy~AN~~~--i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivte 178 (388)
T COG0156 108 GFVANLGL--LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTE 178 (388)
T ss_pred cchhHHHH--HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEe
Confidence 88887777 7888889999999998887788888888999888753 3789999999762 1135777776
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh-hhcCCeEEEEecccccccccCCcccE
Q 013839 203 SAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF-LEDEHLIGCAQSYAKSMGLYGHRVGC 281 (435)
Q Consensus 203 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~SK~~g~~G~RvG~ 281 (435)
..-.-.|.+ .++++|++++++|++++++||+|....+++. .......+ ....+.+|.++||||++|..| ||
T Consensus 179 gVfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~--GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~ 250 (388)
T COG0156 179 GVFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPN--GRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GY 250 (388)
T ss_pred ccccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCC--CccHHHHhCCCCccceEEEEEchhhhcccC---ce
Confidence 555555554 5677999999999999999999877776631 11122222 122455899999999999888 89
Q ss_pred EEEEecChhHHHHHHHHHHHHhhc-cccC-CChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 013839 282 LSILCVDSKQAAAIRSQIQQIARA-MYGS-PPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSS 359 (435)
Q Consensus 282 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 359 (435)
+.+ +.. +++.+.+..+. .+.+ .|+....++..+++.- +.....+++++++...++..++..++
T Consensus 251 v~g---~~~----~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l-------~~~~~~r~~L~~~~~~~~~~~~~~~~- 315 (388)
T COG0156 251 IAG---SAA----LIDYLRNRARPFIFSTALPPAVAAAALAALRIL-------EEGPERRERLQELAAFFRSLLKALGL- 315 (388)
T ss_pred eeC---cHH----HHHHHHHhCCceeccCCCCHHHHHHHHHHHHHH-------HhCHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 854 888 88877776553 3332 3333333344444321 33456778888888888877777664
Q ss_pred CCccccccCcceeE-ecCC---CHHHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHH
Q 013839 360 LNWEHITNQLGMFC-FSGL---TPYQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEV 419 (435)
Q Consensus 360 ~~~~~~~~~~g~~~-~~~~---~~~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~ 419 (435)
...+....+.. .++- ..+....+++ .||.+.+. | |++++. .++++|+.+++.|.++
T Consensus 316 ---~~~~s~s~I~pv~~gd~~~a~~~s~~l~~-~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 316 ---VLLPSESPIIPVILGDEERALEASRALLE-EGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ---ccCCCCCCeeeeEeCCHHHHHHHHHHHHH-CCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 23333333332 2233 2234466665 49999754 3 888743 4888898888887764
No 217
>PRK05939 hypothetical protein; Provisional
Probab=99.84 E-value=3.5e-18 Score=166.00 Aligned_cols=155 Identities=13% Similarity=0.086 Sum_probs=123.2
Q ss_pred ccH---HHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH---HHhhCCCC
Q 013839 93 VST---KMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN---IWRDAQIP 166 (435)
Q Consensus 93 g~~---~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~ 166 (435)
|.| .|.+.++++..+.+ .+ .+++|+.|+..+ +.+++++||+|+++++.|+.+.. .+...|++
T Consensus 45 g~p~~~~lE~~la~leg~~~-------~v---~~ssG~~Ai~~~--l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~ 112 (397)
T PRK05939 45 GTPTTAALEAKITKMEGGVG-------TV---CFATGMAAIAAV--FLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVE 112 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCe-------EE---EeCCHHHHHHHH--HHHHcCCCCEEEECCCccccHHHHHHHHHhcCCE
Confidence 666 88888888874332 23 577889998887 77788999999999999976543 45668888
Q ss_pred eeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCcc-CCCC
Q 013839 167 ERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFA-SGDL 245 (435)
Q Consensus 167 ~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~-~~~~ 245 (435)
++.++. .|++++++++. +++++|++++|+||||.+ .++++|+++|+++|+++|+|++|.... +++
T Consensus 113 v~~v~~-------~d~e~l~~~l~---~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~~~~~- 178 (397)
T PRK05939 113 VTMVDA-------TDVQNVAAAIR---PNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPWLFRP- 178 (397)
T ss_pred EEEECC-------CCHHHHHHhCC---CCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCcccccccCc-
Confidence 888764 27899999997 688999999999999987 578899999999999999999974321 111
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
...+.++++.|+||.++..|.++|++++
T Consensus 179 -----------~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 179 -----------KDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred -----------cccCCEEEEecCeecccCCCCeEEEEEe
Confidence 1124689999999999989999999864
No 218
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=2.2e-18 Score=167.60 Aligned_cols=276 Identities=13% Similarity=0.128 Sum_probs=179.4
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH----HHHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH----NIWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~ 169 (435)
...|++.++++.... +.+ .+.+|+.|+.++ +. ++.+||+|++++|.|++.. ..++..|++++.
T Consensus 56 ~~~le~~lA~l~g~~-------~~v---~~~sG~~ai~~~--l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~ 122 (390)
T PRK08064 56 REALEDIIAELEGGT-------KGF---AFASGMAAISTA--FL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTF 122 (390)
T ss_pred HHHHHHHHHHHhCCC-------CeE---EECCHHHHHHHH--HH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEE
Confidence 468888998887322 233 467788887766 44 6789999999999997443 345568988888
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .|++.+++.++ +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 123 v~~-------~d~~~l~~~l~---~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~----- 184 (390)
T PRK08064 123 VDM-------TNLEEVAQNIK---PNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQK----- 184 (390)
T ss_pred ECC-------CCHHHHHHhcC---CCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccC-----
Confidence 865 16889988887 67899999999999999864 5688999999999999999986543211
Q ss_pred HHHHHhhhcCCeEEEEeccccccc-ccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMG-LYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
++ + ...++++.|++|.++ .+|...|+++ .++++ +++.++..........+...... .+..-
T Consensus 185 -~~----~-~g~Divv~S~tK~~~G~~~~laG~~v--~~~~~----~~~~l~~~~~~~g~~~~~~~a~l---~~~gl--- 246 (390)
T PRK08064 185 -PL----D-LGADVVLHSATKFLAGHSDVLAGLAV--VKDEE----LAQKLYFLQNSFGAVLGVQDCWL---VLRGL--- 246 (390)
T ss_pred -ch----h-hCCcEEEeecceeccCCccceeEEEE--eCCHH----HHHHHHHHHHhcCCCCCHHHHHH---HHccc---
Confidence 11 1 134688999999985 3344567775 33667 77777765543333333332222 22221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-----------Ccccc----ccCcceeEecCCCHHHHHHHhhhccEE-
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQNLEKLGSSL-----------NWEHI----TNQLGMFCFSGLTPYQVDRLAKEFHIY- 392 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----------~~~~~----~~~~g~~~~~~~~~~~~~~ll~~~gI~- 392 (435)
+.+....++..++...+.+.|++++.-. +.... ...+|++.+.=-+.+.+.++++..++.
T Consensus 247 ----~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~ 322 (390)
T PRK08064 247 ----KTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPV 322 (390)
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcce
Confidence 3355666677777788888888765210 01111 123444443211344556666666662
Q ss_pred --EeCC-----------------------------C--cEEeccCCCCcHHHHHHHHHHHHHhhhh
Q 013839 393 --MTQD-----------------------------G--RISMAGVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 393 --i~pg-----------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
+.-| | |+|++- |+.+.+++.|.+++++..+
T Consensus 323 ~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGl---e~~~dli~dl~~Al~~~~~ 385 (390)
T PRK08064 323 FAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGL---ENVDDLIADFEQALSYVEE 385 (390)
T ss_pred EcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhccc
Confidence 2212 1 999855 6778888888888876543
No 219
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=3e-18 Score=167.95 Aligned_cols=155 Identities=15% Similarity=0.069 Sum_probs=121.9
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH----HHHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH----NIWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~ 169 (435)
...|.+.++++..+. . ++++++|++|+.++ +.+++.+||+|+++.+.|++.. ..++..|++++.
T Consensus 66 ~~~Le~~lA~leg~~--------~--al~~~sG~~Ai~~a--l~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~ 133 (431)
T PRK08248 66 TDVFEKRIAALEGGI--------G--ALAVSSGQAAITYS--ILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKF 133 (431)
T ss_pred HHHHHHHHHHHhCCC--------c--EEEECCHHHHHHHH--HHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEE
Confidence 467888888887432 2 33699999999888 7778899999999999886543 345678988888
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .|+++++++++ +++++|++++|+||||.+.+. ++|+++|+++|+++|+|++|..- .. .
T Consensus 134 vd~-------~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~di---~~I~~la~~~gi~vIvD~t~a~~-~~-----~ 194 (431)
T PRK08248 134 VDP-------SDPENFEAAIT---DKTKALFAETIGNPKGDVLDI---EAVAAIAHEHGIPLIVDNTFASP-YL-----L 194 (431)
T ss_pred ECC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEeCCCCcc-cc-----C
Confidence 865 27889999887 678999999999999999875 58999999999999999997521 11 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
.++ + ...++++.|++|.+|.+|.++|++++
T Consensus 195 ~pl----~-~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 195 RPI----E-HGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred Chh----H-cCCCEEEEcCccccCCCCCceEEEEE
Confidence 122 1 24578899999999999999999874
No 220
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.84 E-value=1.6e-18 Score=167.50 Aligned_cols=157 Identities=16% Similarity=0.091 Sum_probs=118.0
Q ss_pred CCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCC
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPD 194 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~ 194 (435)
++++ +++||++|+.++ +.++ +.|||+|++++|+|..+...+...|++++.+++ +++++.+|+++++++++ +
T Consensus 47 ~~~v--~~~sgt~aL~~~--l~al~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~-d~~~~~~d~~~le~~i~---~ 118 (376)
T TIGR02379 47 KKAL--LTPSCTAALEMA--ALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDI-RPDTMNIDETLIESAIT---H 118 (376)
T ss_pred CeEE--EeCCHHHHHHHH--HHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec-CCCcCCCCHHHHHHhcC---c
Confidence 3666 899999998887 5555 789999999999999999888999999999998 45668899999999987 6
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCcc-CCCCcccHHHHHHhhhcCCeEEEEecc--ccc
Q 013839 195 SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFA-SGDLDKDAQAIRIFLEDEHLIGCAQSY--AKS 271 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~--SK~ 271 (435)
++++|+ |+||||...+ +++|.++|++||++||+|+++.... +++. .+..+ + .+.+.|| +|.
T Consensus 119 ~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~~~~~-----~~g~~---~--~~~~fSf~~~K~ 182 (376)
T TIGR02379 119 RTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMSTYKGR-----ALGSI---G--HLGTFSFHETKN 182 (376)
T ss_pred CceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCccCCc-----ccCCC---C--CEEEEeCCCCCc
Confidence 788876 5789998765 5599999999999999999976654 3321 11011 1 2223332 388
Q ss_pred ccccCCcccEEEEEecChhHHHHHHHHHHHHh
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA 303 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~ 303 (435)
+. +|.+.|+++ +.+++ +.++++.+.
T Consensus 183 l~-~g~~gG~v~--~~~~~----~~~~~~~~~ 207 (376)
T TIGR02379 183 YT-SGGEGGALL--INDQA----FIERAEIIR 207 (376)
T ss_pred Cc-ccCCceEEE--ECCHH----HHHHHHHHH
Confidence 86 777889985 54677 666555543
No 221
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.84 E-value=3.2e-18 Score=167.92 Aligned_cols=331 Identities=10% Similarity=0.043 Sum_probs=204.6
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC--CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS--EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
++...+|+..|.. ..+--...+++++++.+++... ....+ ...-..++.+.+++++ +. +.+. ++++
T Consensus 35 ~g~~~lD~~s~~~-~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~-~~-------~~~~--~~~S 102 (401)
T TIGR01885 35 EGKRYLDFLSAYS-AVNQGHCHPKIVKALTEQAQKLTLSSRAF-YNDVFGEFAEYVTKLF-GY-------DKVL--PMNT 102 (401)
T ss_pred CCCEEEEcccCHh-hccCCCCCHHHHHHHHHHHHhcccccccc-CCHHHHHHHHHHHhhc-CC-------CEEE--EeCc
Confidence 5678899988742 2110011233444444443311 01111 2233456666666664 22 2555 8999
Q ss_pred chhHHHHHHHHHHHh-------CCC-CEEEEcCCCChhh-HHHHhhCC---------C---CeeeeeecCCCCCCcChHh
Q 013839 126 GTGACRLFAEFQRRF-------HPE-SHIYFPDPTWSNH-HNIWRDAQ---------I---PERTYHYYDPDSKSLDFAA 184 (435)
Q Consensus 126 g~~a~~~~~~~~~~~-------~~g-d~Vlv~~p~y~~~-~~~~~~~g---------~---~~~~v~~~~~~~~~~d~e~ 184 (435)
|++|+..+..+.... .+| ++|+...-+|.+. ...+...+ . .+..++. .|+++
T Consensus 103 Gs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 175 (401)
T TIGR01885 103 GAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEA 175 (401)
T ss_pred cHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHH
Confidence 999999986544332 233 5677777777653 23233222 1 1122221 27889
Q ss_pred HHHHhhcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 185 LMDDIKNAPDSSFFLLHPSAHNPTGVDPTEE-QWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 185 l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
+++.+.+.+++..++++..+++++|...+.+ .+++|.++|++|++++|+||+|.++++.+ ..... ...+....++
T Consensus 176 le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G---~~~~~-~~~~~~~di~ 251 (401)
T TIGR01885 176 LEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG---KLLCV-DHENVKPDIV 251 (401)
T ss_pred HHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHH-hhcCCCCCEE
Confidence 9998875545678888989999999988644 69999999999999999999998776543 11222 2222223333
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
++||.++..|+|+|++++ +++ +++.+.......+.+.+++++.++.++|+... + ....++.+
T Consensus 252 ---~~gK~l~~g~~~ig~v~~---~~~----i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~------~--~~l~~~~~ 313 (401)
T TIGR01885 252 ---LLGKALSGGVYPVSAVLA---DDD----VMLTIKPGEHGSTYGGNPLACAVAVAALEVLE------E--EKLAENAE 313 (401)
T ss_pred ---EeeccccCCCCCcEEEEE---cHH----HHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH------h--ccHHHHHH
Confidence 467999866699999964 777 77766542233455667888888877775321 1 13446677
Q ss_pred HHHHHHHHHHHhhCCCCCccccccCcceeE-ecCCC-----HHHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHH
Q 013839 344 RKRTTLRQNLEKLGSSLNWEHITNQLGMFC-FSGLT-----PYQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYL 412 (435)
Q Consensus 344 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~-~~~~~-----~~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~ 412 (435)
++.+++.+.|++++.+ .+....+.+.++. +++.+ ...+...+.++||.+.|.+ ||+.. ..++++++++
T Consensus 314 ~~~~~~~~~L~~l~~~-~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~ 392 (401)
T TIGR01885 314 KLGEIFRDQLKKLPKP-IITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEG 392 (401)
T ss_pred HHHHHHHHHHHhccCC-ceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHHH
Confidence 7788999999888532 1122345565555 23322 2334333457899998874 88753 3588999999
Q ss_pred HHHHHHHH
Q 013839 413 ANAIHEVT 420 (435)
Q Consensus 413 ~~~l~~~l 420 (435)
+++|.+++
T Consensus 393 l~~l~~~l 400 (401)
T TIGR01885 393 LEIIKKVI 400 (401)
T ss_pred HHHHHHHh
Confidence 99998875
No 222
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.83 E-value=5.1e-19 Score=170.83 Aligned_cols=255 Identities=16% Similarity=0.154 Sum_probs=169.5
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHh----CCC-CEEEEcCCCChhhH---HHHhhCCC
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRF----HPE-SHIYFPDPTWSNHH---NIWRDAQI 165 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~----~~g-d~Vlv~~p~y~~~~---~~~~~~g~ 165 (435)
..++|+.+++++ +.. +++++ ++.|+++++.++ +..+. .+| +.|++....|+.+. ..++..|+
T Consensus 44 ~~~~r~~la~~~-g~~-----~~~v~--~~~g~t~a~~~~--l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~ 113 (353)
T TIGR03235 44 VERARKQVAEAL-GAD-----TEEVI--FTSGATESNNLA--ILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGF 113 (353)
T ss_pred HHHHHHHHHHHh-CCC-----CCeEE--EeCCHHHHHHHH--HHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCC
Confidence 467888899887 332 45777 899999998887 44333 356 77888876665443 34556799
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
+++.++. ++++.+|++++++.++ ++++++++++++||||..++ +++|.++|+++|+++++|+++. +...+.
T Consensus 114 ~v~~v~~--~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~-~g~~~~ 184 (353)
T TIGR03235 114 TVTYLPV--DESGRIDVDELADAIR---PDTLLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQV-VGKITV 184 (353)
T ss_pred EEEEEcc--CCCCcCCHHHHHHhCC---CCCEEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhh-cCCccc
Confidence 9999987 3456799999999987 57899999999999999987 4689999999999999999953 221111
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHH--HHHH-------hhccccCCChhHHH
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQ--IQQI-------ARAMYGSPPVHGIL 316 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~--l~~~-------~~~~~~~~~~~~q~ 316 (435)
++ ...+-++++.|.+|.+|.+| +|++++ +++ .... +... .+.....++.....
T Consensus 185 -----~~----~~~~~D~~~~s~~K~~gp~g--~g~l~~---~~~----~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 246 (353)
T TIGR03235 185 -----DL----SADRIDLISCSGHKIYGPKG--IGALVI---RKR----GKPKAPLKPIMFGGGQERGLRPGTLPVHLIV 246 (353)
T ss_pred -----cc----cccCCCEEEeehhhcCCCCc--eEEEEE---ccC----cccccccCceeeCCCCcCccccCCCChHHHH
Confidence 11 11234677788999987666 688864 444 2111 1110 00112334444445
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC----cceeE--ecCCCHHHHHHHhhhcc
Q 013839 317 LVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ----LGMFC--FSGLTPYQVDRLAKEFH 390 (435)
Q Consensus 317 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~ll~~~g 390 (435)
++..+++.. .+..+..+++++++++.+++.|++.|. ....+. .++.. ..+.+.+.+...|++ +
T Consensus 247 al~~al~~~------~~~~~~~~~~~~~l~~~l~~~l~~~g~----~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~ 315 (353)
T TIGR03235 247 GMGEAAEIA------RRNAQAWEVKLRAMRNQLRDALQTLGV----KLNGDPAETIPHILNFSIDGVNSEALIVNLRA-D 315 (353)
T ss_pred HHHHHHHHH------HhhHHHHHHHHHHHHHHHHHHhccCCe----EEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-C
Confidence 555555421 245677888999999999999977653 333211 22222 235676777666664 9
Q ss_pred EEEeCC
Q 013839 391 IYMTQD 396 (435)
Q Consensus 391 I~i~pg 396 (435)
|.+.+|
T Consensus 316 i~v~~g 321 (353)
T TIGR03235 316 AAVSTG 321 (353)
T ss_pred eEEEch
Confidence 999887
No 223
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=2.3e-18 Score=167.41 Aligned_cols=217 Identities=14% Similarity=0.066 Sum_probs=151.1
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH----HhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI----WRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~ 169 (435)
...|.+.++++..+.+ ++.+++|+.|+.++ +++++.+||+|+++.++|.+.... +...|+++..
T Consensus 63 v~~lE~~la~leg~~~----------av~~~SG~aAi~~a--l~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~ 130 (432)
T PRK06702 63 LAAFEQKLAELEGGVG----------AVATASGQAAIMLA--VLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTF 130 (432)
T ss_pred HHHHHHHHHHHhCCCc----------EEEECCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEE
Confidence 5678888888874432 33799999999988 777889999999999999866665 6778998888
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .+|+++++++++ ++|++|++.+|+||++.+.+ +++|+++|++||+++|+|++|..-
T Consensus 131 vd~------~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP--------- 189 (432)
T PRK06702 131 FNP------NLTADEIVALAN---DKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATP--------- 189 (432)
T ss_pred ECC------CCCHHHHHHhCC---cCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCch---------
Confidence 743 368899999998 78999999999999998876 669999999999999999997311
Q ss_pred HHHHHhhhcCCeEEEEecccc-----cccccCCcc-----cEEEEEecChhHH-----------------HHHHHHHH-H
Q 013839 250 QAIRIFLEDEHLIGCAQSYAK-----SMGLYGHRV-----GCLSILCVDSKQA-----------------AAIRSQIQ-Q 301 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK-----~~g~~G~Rv-----G~~~~~~~~~~~~-----------------~~~~~~l~-~ 301 (435)
.... +-...-.|++.|+|| ..++.|.++ +|.. +.+.+.. ..+..+.+ .
T Consensus 190 -~~~~-pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (432)
T PRK06702 190 -YLCQ-AFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTN--GKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQ 265 (432)
T ss_pred -hhCC-hhhcCCCEEEEccccccCCCcceeceEEEeCCCccccc--ccccccccccccccccchhhccchhhHHHHHHHH
Confidence 1111 111234699999999 556666665 4542 1112200 00111111 1
Q ss_pred HhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 302 IARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 302 ~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
..+.....++.+..+.+...|+. +....++..++...+.+.|+..+
T Consensus 266 ~~~~~g~~~sp~~a~l~~rgL~T----------l~lR~~r~~~Na~~la~~L~~~p 311 (432)
T PRK06702 266 LLRDYGNCMSPFNAYISNIGLET----------LHLRMERHSENALAVAKWLADHE 311 (432)
T ss_pred HHHHccCCCCHHHHHHHHhccCc----------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 22233346777766666666654 34444555678888888888765
No 224
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=9.6e-18 Score=162.22 Aligned_cols=211 Identities=14% Similarity=0.090 Sum_probs=145.9
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH----HHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN----IWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 169 (435)
...|++.++++.... ..+ ++.+|+.++.++ +.++.+||+|++++|+|++... .+...|++++.
T Consensus 52 ~~~Le~~lA~l~g~~-------~~~---~~~sG~aai~~~---~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~ 118 (377)
T PRK07671 52 RAALEELIAVLEGGH-------AGF---AFGSGMAAITAV---MMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTF 118 (377)
T ss_pred HHHHHHHHHHHhCCC-------ceE---EeCCHHHHHHHH---HHHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEE
Confidence 568888888887322 223 477788777654 3567899999999999984433 33457888887
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .|+++++++++ +++++|++++|+||||... ++++|.++|+++|+++|+|++|....+..
T Consensus 119 v~~-------~d~~~l~~ai~---~~tklV~le~P~NPtg~~~---dl~~I~~la~~~g~~lvvD~a~~~~~~~~----- 180 (377)
T PRK07671 119 VDT-------SNLEEVEEAIR---PNTKAIYVETPTNPLLKIT---DIKKISTIAKEKGLLTIVDNTFMTPYWQS----- 180 (377)
T ss_pred ECC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCCccccCC-----
Confidence 753 37899999997 6789999999999999875 56689999999999999999986533221
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
++ + ...++++.|+||.++.++- -.|+++ +++++ +++.++..+.......+....+.+..-+
T Consensus 181 -p~----~-~g~Divv~S~sK~l~G~~~~~~G~~v--~~~~~----l~~~~~~~~~~~g~~~~~~~a~l~~~~l------ 242 (377)
T PRK07671 181 -PI----S-LGADIVLHSATKYLGGHSDVVAGLVV--VNSPE----LAEDLHFVQNSTGGILGPQDSWLLLRGL------ 242 (377)
T ss_pred -hh----h-hCCeEEEecCcccccCCccceeEEEE--eCcHH----HHHHHHHHHHhhcCCCCHHHHHHHHcCc------
Confidence 11 1 1236999999999974443 235553 44666 7676776555443444444333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.+....++..++...+.+.|++.+
T Consensus 243 ----~tl~~R~~~~~~na~~la~~L~~~~ 267 (377)
T PRK07671 243 ----KTLGIRMEEHETNSRAIAEFLNNHP 267 (377)
T ss_pred ----ChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2344566677788888888888764
No 225
>PLN02509 cystathionine beta-lyase
Probab=99.83 E-value=7.9e-18 Score=165.18 Aligned_cols=222 Identities=11% Similarity=0.060 Sum_probs=147.2
Q ss_pred CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH----H
Q 013839 85 FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI----W 160 (435)
Q Consensus 85 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~ 160 (435)
.+.|... |.| .++++.+++....+. +..+ .+++|.+|+.++ +.++.+||+|++++|.|+.+... +
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg~----e~ai--~~~SG~aAi~~i---l~ll~~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDKA----DRAF--CFTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhCC----CEEE--EeCcHHHHHHHH---HHHhCCCCEEEEcCCchhhHHHHHHHHH
Confidence 3557664 655 466666665333221 2333 578888887554 35688999999999999987633 4
Q ss_pred hhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCc
Q 013839 161 RDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGF 240 (435)
Q Consensus 161 ~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~ 240 (435)
...|++++.++. .|++++++++. +++++|++++|+||||.. .++++|+++|++||+++|+|++|...
T Consensus 193 ~~~G~~v~~vd~-------~d~e~l~~ai~---~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 193 PRSGVVVKRVNT-------TNLDEVAAAIG---PQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred HHCCeEEEEeCC-------CCHHHHHHhCC---cCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCcccc
Confidence 567888877753 36889999887 678999999999999975 77889999999999999999997433
Q ss_pred cCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCc-ccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHH
Q 013839 241 ASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHR-VGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVA 319 (435)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~R-vG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~ 319 (435)
.... ++ + ...++++.|++|.++.+|-- .|.++ +.++. +...++..+.......+....+
T Consensus 260 ~~~~------pl----~-~gaDivv~S~tK~l~G~gdv~gG~v~--~~~~~----l~~~~~~~~~~~g~~l~p~~A~--- 319 (464)
T PLN02509 260 VLSR------PL----E-LGADIVMHSATKFIAGHSDVMAGVLA--VKGEK----LAKEVYFLQNSEGSGLAPFDCW--- 319 (464)
T ss_pred ccCC------hh----h-cCCcEEEecCcccccCCCccceeEEE--eccHH----HHHHHHHHHHhcCCCcCHHHHH---
Confidence 2211 11 1 13468899999998754433 35553 33444 4444443332222223333322
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 320 TILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 320 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
..+..- +.+....++..++++.+.+.|++++
T Consensus 320 l~lr~L-------~tL~~R~~r~~~nA~~la~~L~~~p 350 (464)
T PLN02509 320 LCLRGI-------KTMALRIEKQQENARKIAMYLSSHP 350 (464)
T ss_pred HHHhhh-------hhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 222221 4556677788888888889998765
No 226
>PRK05968 hypothetical protein; Provisional
Probab=99.83 E-value=6.4e-18 Score=164.24 Aligned_cols=210 Identities=14% Similarity=0.043 Sum_probs=146.0
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH----HHHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH----NIWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~ 169 (435)
..+|++.++++....+ .+ ++.+|+.|+.++ +.+++.+||+|+++.+.|.... ..+...|++++.
T Consensus 65 ~~~le~~lA~l~g~~~-------av---~~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (389)
T PRK05968 65 VRAFEEMLAKLEGAED-------AR---GFASGMAAISST--VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDY 132 (389)
T ss_pred HHHHHHHHHHHhCCCc-------EE---EECCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEE
Confidence 5689999999874321 23 578888898877 6677899999999999997643 455667888888
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .|++++++++. ++++|++++ |||..++..++++|.++|++||+++|+|++|....+..
T Consensus 133 vd~-------~d~~~l~~~i~----~tklV~ie~---pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~----- 193 (389)
T PRK05968 133 VDG-------RDEEAVAKALP----GAKLLYLES---PTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR----- 193 (389)
T ss_pred eCC-------CCHHHHHHhcc----cCCEEEEEC---CCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC-----
Confidence 754 27888888773 467888865 55555677899999999999999999999986554321
Q ss_pred HHHHHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHHhh-ccccCCChhHHHHHHHHhCChhh
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQIAR-AMYGSPPVHGILLVATILSDPNL 327 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~~~~~~l~~~~l 327 (435)
++. . ..++++.|+||.++.+| .+.|+++. +++ ++++++.... .....++.+.+..+...|+.
T Consensus 194 -p~~----~-g~Divv~S~tK~l~g~~~~~gG~i~~---~~~----~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t--- 257 (389)
T PRK05968 194 -PIT----L-GVDLVIHSASKYLGGHSDTVAGVVAG---SKE----HIARINAEAYPYLGAKLSPFEAWLLLRGLRT--- 257 (389)
T ss_pred -chh----c-CCcEEEeeccccccCCCCeEEEEEEE---CHH----HHHHHHHHHHHhCCCCCChHHHHHHHcccCc---
Confidence 111 1 23578889999998655 46787753 777 6666665433 22334555555544444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 328 KSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+....++..++.+.+.+.|++++
T Consensus 258 -------l~~r~~~~~~~a~~la~~L~~~p 280 (389)
T PRK05968 258 -------LPLRMKAHEASALEIARRLKAHP 280 (389)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 34445555666777788888765
No 227
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.82 E-value=3.7e-18 Score=170.25 Aligned_cols=332 Identities=9% Similarity=0.041 Sum_probs=199.7
Q ss_pred eeecceecCCCCCcccchHHHHHHHHhcCCCCCCC---CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHH
Q 013839 54 NLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLES---ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGAC 130 (435)
Q Consensus 54 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~ 130 (435)
-++.|.| +. .+++.+++.+.........+.| ...+|..++++++.+++....+. + +.....+.|+++.+
T Consensus 72 ~~g~G~~-~~---~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~---~-~~~l~~~~GA~a~~ 143 (481)
T PRK04366 72 FYPLGSC-TM---KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM---D-AVTLQPAAGAHGEL 143 (481)
T ss_pred eecCccc-CC---CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC---C-ceEEEeCcHHHHHH
Confidence 3666764 32 4555555555554211124557 35678889999888887333222 1 22211223333333
Q ss_pred HHHHHHH-HHhCCCC----EEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCC
Q 013839 131 RLFAEFQ-RRFHPES----HIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAH 205 (435)
Q Consensus 131 ~~~~~~~-~~~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~ 205 (435)
..+..+. .++.+|| +|++++|.|+.+...++..|++++.+++ ++++.+|+++|++++. ++++++++++||
T Consensus 144 ~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~--~~~~~~D~e~L~~~i~---~~t~~V~v~~Pn 218 (481)
T PRK04366 144 TGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS--NEDGLVDLEALKAAVG---EDTAALMLTNPN 218 (481)
T ss_pred HHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec--CCCCCcCHHHHHhhcc---cCCeEEEEeCCC
Confidence 2221111 2356776 9999999999999999999999999988 3457899999999987 678899999987
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc----CCcccE
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY----GHRVGC 281 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~----G~RvG~ 281 (435)
|||.. ..++++|+++|+++|+++++|.++..-..+.. + +...+-++++++.+|.++.| |..+|+
T Consensus 219 -~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-----~----~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~ 286 (481)
T PRK04366 219 -TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGKA-----R----PGDMGFDVVHLNLHKTFSTPHGGGGPGSGP 286 (481)
T ss_pred -Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhcccC-----C----ccccCCCEEEEechhhcCCCCCCCCCCeee
Confidence 99954 45799999999999999999999631111100 0 11224578889999988644 445677
Q ss_pred EEEEecChhHHHHHHHHHHHH-------------------hhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 013839 282 LSILCVDSKQAAAIRSQIQQI-------------------ARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRI 342 (435)
Q Consensus 282 ~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~ 342 (435)
+.+ .++ +.+.+... .+......+.+...++...+..-+ .+.+++..++.
T Consensus 287 l~~---~~~----~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G-----~~Gl~~~a~~~ 354 (481)
T PRK04366 287 VGV---KEE----LAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLG-----AEGLREVSEDA 354 (481)
T ss_pred eee---hhh----hHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHH-----HHHHHHHHHHH
Confidence 753 555 33332100 000000111222223333332211 14456666777
Q ss_pred HHHHHHHHHHHHhhCCCCCccccccC--cceeEec-----CCCHHHHHHHhhhccEEEe----C---CC--cEEeccC-C
Q 013839 343 QRKRTTLRQNLEKLGSSLNWEHITNQ--LGMFCFS-----GLTPYQVDRLAKEFHIYMT----Q---DG--RISMAGV-T 405 (435)
Q Consensus 343 ~~~~~~l~~~l~~~~~~~~~~~~~~~--~g~~~~~-----~~~~~~~~~ll~~~gI~i~----p---gg--Ris~~~~-~ 405 (435)
.++.+++.+.|+++ .. +....+. ...|.+. +.+...+.+.|.++||.+. | .+ |++++.. +
T Consensus 355 ~~~a~~l~~~L~~~-~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t 431 (481)
T PRK04366 355 VLNANYLKARLKDI-YD--LPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETES 431 (481)
T ss_pred HHHHHHHHHHhHhh-Cc--ccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCC
Confidence 77888999999876 21 1111111 1112221 2355556545567898875 1 22 7776432 7
Q ss_pred CCcHHHHHHHHHHHHHhhhh
Q 013839 406 TGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 406 ~e~i~~~~~~l~~~l~~~~~ 425 (435)
.++|+++++.|+++.++..+
T Consensus 432 ~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 432 KETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999876654
No 228
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=8.8e-18 Score=165.53 Aligned_cols=346 Identities=13% Similarity=0.060 Sum_probs=200.5
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++...+|+..|.-...-| -..+.+++++.+++... .+ +.......+.+..+++.+...-.. ..+.+. ++++|
T Consensus 38 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~-~~-~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~--f~~sG 110 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVG-HNNPRVVKAIKEQTDKL-IH-YTPIYGFPVEPLLLAEKLIEIAPG--DNPKVS--FGLSG 110 (443)
T ss_pred CCCCEEEEccccHhhcccC-CCCHHHHHHHHHHHHhc-cC-ccccccCcHHHHHHHHHHHHhCCC--CCCEEE--EcCCH
Confidence 4678899998884211122 12333444444555422 11 111111123334444444222111 014677 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH-HhhCCC------------CeeeeeecCCCC--CC--------cChH
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI-WRDAQI------------PERTYHYYDPDS--KS--------LDFA 183 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~-~~~~g~------------~~~~v~~~~~~~--~~--------~d~e 183 (435)
++|++.+..+........+|+....+|.+.... +...|. .+..+|..+... +. -+++
T Consensus 111 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (443)
T PRK08360 111 SDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVE 190 (443)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHH
Confidence 999999976665554447788888888765322 221121 122222211000 10 1344
Q ss_pred hHHHHhhc--CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCC
Q 013839 184 ALMDDIKN--APDSSFFLLHPSAHNPTGVDPT-EEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEH 260 (435)
Q Consensus 184 ~l~~~i~~--~~~~~~~v~~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 260 (435)
.+++.+.+ .+++++++++...+||+|.+++ .+.+++|.++|++||+++|+||+|.++...+ ..+....+ +...
T Consensus 191 ~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G---~~~a~~~~-~~~p 266 (443)
T PRK08360 191 YIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG---KWFAIEHF-GVEP 266 (443)
T ss_pred HHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---cchhhhhc-CCCC
Confidence 56666653 1356788888877899999887 5579999999999999999999999887654 12222222 2223
Q ss_pred eEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 013839 261 LIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMAD 340 (435)
Q Consensus 261 ~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~ 340 (435)
+++ ++||.++ +|+|+||+++ +++ +++.+.......+.+.+.+.+.++.+.|+.-. + ....+
T Consensus 267 Dii---tlsK~l~-~G~pigav~~---~~~----i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~------~--~~l~~ 327 (443)
T PRK08360 267 DII---TLGKPLG-GGLPISATIG---RAE----IMDSLPPLAHAFTLSGNPVASAAALAVIEEIE------E--KNLLK 327 (443)
T ss_pred CEE---Eeccccc-CCceeEEEEE---cHH----HHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHH------H--cCHHH
Confidence 333 6799999 9999999964 777 77777654334456677787888877775321 1 12345
Q ss_pred HHHHHHHHHHHHHHhhC--CCCCccccccCcceeEecCC---------C---HHHHHHHhhhccEEEeCC-C---cEEec
Q 013839 341 RIQRKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGL---------T---PYQVDRLAKEFHIYMTQD-G---RISMA 402 (435)
Q Consensus 341 ~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~---------~---~~~~~~ll~~~gI~i~pg-g---Ris~~ 402 (435)
+.+++.+++.+.|+++. .+ .+......|-++. +.+ + ...+...+.++||.+.+. + |++..
T Consensus 328 ~~~~~g~~l~~~L~~l~~~~~-~v~~vrg~Gl~~g-ie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~ 405 (443)
T PRK08360 328 RAEKLGNYTKKRLEEMKKKHE-LIGDVRGIGLMIG-VDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPP 405 (443)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEE-EEEecCCcccCccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCC
Confidence 55555556666665431 11 1122333443332 211 1 123333345689998764 3 77543
Q ss_pred -cCCCCcHHHHHHHHHHHHHhhh
Q 013839 403 -GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 403 -~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
..+++++++++++|.++++.+.
T Consensus 406 l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 406 LTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 2489999999999999997654
No 229
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=8.4e-18 Score=165.00 Aligned_cols=157 Identities=15% Similarity=0.092 Sum_probs=123.6
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH----HHHhhCCCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH----NIWRDAQIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~ 167 (435)
.-..+|++.++++.... ..+ ++++|+.|+..+ +.+++.+||+|+++.+.|++.. ..+...|+++
T Consensus 57 p~~~~le~~lA~l~g~~--------~~v--~~~sG~~Ai~~a--l~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v 124 (418)
T TIGR01326 57 PTTDVLEQRIAALEGGV--------AAL--AVASGQAAITYA--ILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEV 124 (418)
T ss_pred hhHHHHHHHHHHHhCCC--------eEE--EEccHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEE
Confidence 33578999999987321 233 799999998888 7777899999999999986543 3456788888
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++. + |++.+++++. ++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|......
T Consensus 125 ~~v~~---~----d~~~l~~~l~---~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~---- 187 (418)
T TIGR01326 125 RFVDP---D----DPEEFEKAID---ENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLC---- 187 (418)
T ss_pred EEECC---C----CHHHHHHhcC---cCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcC----
Confidence 88764 1 7899999887 67899999999999998875 669999999999999999998532111
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
. ++ + .+.++++.|+||.++.+|+|+||+++
T Consensus 188 ~--~l----~-~g~Divv~S~sK~l~g~G~~lGg~v~ 217 (418)
T TIGR01326 188 R--PI----D-HGADIVVHSATKYIGGHGTAIGGVIV 217 (418)
T ss_pred C--ch----h-cCCeEEEECccccccCCccceEEEEE
Confidence 0 11 1 24689999999999999999999974
No 230
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.82 E-value=1e-17 Score=163.44 Aligned_cols=341 Identities=13% Similarity=0.054 Sum_probs=202.5
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..+|+..|.-...-| .-.+.+++++.+++... .+ +.+.. ..+....+++.+...... .+.+. ++++|
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~-~~-~~~~~-~~~~~~~la~~L~~~~~~---~~~v~--f~~sG 107 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGLG-HNDPDLVAALTEQAGKL-WH-TSNVF-YSAPPLKLAEELVTASRF---AEKVF--LCNSG 107 (408)
T ss_pred CCCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhc-cc-ccccc-CCHHHHHHHHHHHhhCCC---CCEEE--EcCch
Confidence 4678899998774211112 12233444444554422 11 11111 122334455555322111 24677 89999
Q ss_pred hhHHHHHHHHHHHh----C--CC-CEEEEcCCCChhhHHHHhh-CCCCee---eeeecCC--CCCCcChHhHHHHhhcCC
Q 013839 127 TGACRLFAEFQRRF----H--PE-SHIYFPDPTWSNHHNIWRD-AQIPER---TYHYYDP--DSKSLDFAALMDDIKNAP 193 (435)
Q Consensus 127 ~~a~~~~~~~~~~~----~--~g-d~Vlv~~p~y~~~~~~~~~-~g~~~~---~v~~~~~--~~~~~d~e~l~~~i~~~~ 193 (435)
++|++.+..+.... . ++ .+|+....+|.+....... .|-... ..+..+. .-...|++.+++.+.
T Consensus 108 seA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~--- 184 (408)
T PRK04612 108 TEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA--- 184 (408)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC---
Confidence 99999997665544 1 22 4688888888776443221 111100 0011000 000137888888885
Q ss_pred CCcEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccc
Q 013839 194 DSSFFLLHPSAHNPTGVDPT--EEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKS 271 (435)
Q Consensus 194 ~~~~~v~~~~p~NPtG~~~~--~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 271 (435)
+...+.++..|.+++|-+++ .+.+++|.++|++||+++|+||+|.++...+ ..+.. ...+.+..+.++||.
T Consensus 185 ~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~~a~----~~~~~~pdi~t~~K~ 257 (408)
T PRK04612 185 GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG---TLFAH----WQEQVTPDIVTLAKA 257 (408)
T ss_pred CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---chhhh----hhcCCCCCEEEEcch
Confidence 23345555567777876655 5689999999999999999999999887654 11111 112345667899999
Q ss_pred ccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQ 351 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 351 (435)
++ +|+|+||+++ +++ +.+.+.......+.+.+++++.++.+.|+.-. + ....++.+++.+++.+
T Consensus 258 l~-~G~piga~~~---~~~----~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~------~--~~l~~~~~~~g~~l~~ 321 (408)
T PRK04612 258 LG-GGFPIGAMLA---GPK----VAETMQFGAHGTTFGGNPLAAAVARVALRKLA------S--PQIAANVARQSAALRA 321 (408)
T ss_pred hc-CCCceEEEEE---CHH----HHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHH------h--ccHHHHHHHHHHHHHH
Confidence 99 8999999964 677 66666543444556678888888888775321 1 2455666666777777
Q ss_pred HHHhhCCCC-CccccccCcceeEecCC------CHHHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHHHHHHH
Q 013839 352 NLEKLGSSL-NWEHITNQLGMFCFSGL------TPYQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLANAIHEV 419 (435)
Q Consensus 352 ~l~~~~~~~-~~~~~~~~~g~~~~~~~------~~~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~ 419 (435)
.|+++.... .+......|.++. +.+ ....+...+.++||.+.+.| |+... ..+++++++++++|.++
T Consensus 322 ~l~~l~~~~~~i~~vrg~Gl~~~-i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~ 400 (408)
T PRK04612 322 GLEALNAEFGVFAQVRGRGLMLG-AVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLA 400 (408)
T ss_pred HHHHHHhhCCCeeeeeccceEEE-EEecCchhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHH
Confidence 776653110 1122344443333 222 12344444567999998865 66632 34899999999999999
Q ss_pred HHhh
Q 013839 420 TRSE 423 (435)
Q Consensus 420 l~~~ 423 (435)
+.+.
T Consensus 401 l~~~ 404 (408)
T PRK04612 401 LADY 404 (408)
T ss_pred HHHH
Confidence 8764
No 231
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=7.9e-18 Score=162.99 Aligned_cols=273 Identities=14% Similarity=0.081 Sum_probs=175.0
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH----HhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI----WRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~ 169 (435)
..+|.+.+++++.. ++.+ ++.+|+.|+.++ + .++.+||+|+++++.|...... +...|++++.
T Consensus 49 ~~~le~~la~l~g~--------~~~l--~~~sG~~al~~~--l-~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 115 (378)
T TIGR01329 49 RTALESLLAKLDKA--------DRAF--AFSSGMAALDVI--T-RLLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVH 115 (378)
T ss_pred HHHHHHHHHHHhCC--------CcEE--EECCHHHHHHHH--H-HHhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEE
Confidence 35677777776632 1333 578888887765 3 3679999999999999876543 4557989888
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .|+++++++++ ++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 116 vd~-------~d~~~le~~i~---~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~~------ 176 (378)
T TIGR01329 116 VDT-------TDLDKVKAALG---PKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLLC------ 176 (378)
T ss_pred eCC-------CCHHHHHHhcC---cCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 865 27889999987 67899999999999998875 679999999999999999996332211
Q ss_pred HHHHHhhhcCCeEEEEecccccccc-cCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGL-YGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~-~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
.++. . .-++++.|++|.++- .+.+.|+++ +.+++ +.++++..........+....+.+..-+
T Consensus 177 ~~l~----~-g~Di~v~S~tK~l~G~~~~~~G~v~--~~~~~----~~~~~~~~~~~~G~~~~~~~a~l~~~~l------ 239 (378)
T TIGR01329 177 NPLE----L-GADIVYHSATKFLAGHSDVMAGVLA--VKGEE----IAKKVYFLQNSTGSGLAPFDCWLLLRGI------ 239 (378)
T ss_pred Chhh----c-CCcEEEEecceeccCCccceeEEEE--eCcHH----HHHHHHHHHHhcCCcCCHHHHHHHHccC------
Confidence 1221 1 236889999998753 346788886 33555 5555655443233334444332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc-----------cc----cccCcceeEec-C-CC-HHHHHHHhhhcc
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNW-----------EH----ITNQLGMFCFS-G-LT-PYQVDRLAKEFH 390 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-----------~~----~~~~~g~~~~~-~-~~-~~~~~~ll~~~g 390 (435)
+.+....++..++...+.+.|++++.-..+ .. ....+|++.|. + .. ...+...|+..+
T Consensus 240 ----~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~ 315 (378)
T TIGR01329 240 ----KTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFS 315 (378)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcc
Confidence 234445556666666777777765421000 00 01123444443 1 11 223333346677
Q ss_pred EEEeCCC-------------------------------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 391 IYMTQDG-------------------------------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 391 I~i~pgg-------------------------------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
|.+.-|| |+|++- |+.+.+++-|.++++.
T Consensus 316 i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 316 ITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFVT 375 (378)
T ss_pred cccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 7776553 888854 7788888888888764
No 232
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=1.5e-17 Score=160.05 Aligned_cols=193 Identities=11% Similarity=0.050 Sum_probs=137.7
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH----HHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcE
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN----IWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSF 197 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 197 (435)
++.+|++|+..+ +++++++||+|++++|.|+++.. .++..|+++..++. . +.+.++++++ ++++
T Consensus 84 ~~sSG~aAi~~~--l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~---~----~~e~l~~al~---~~Tk 151 (395)
T PRK05967 84 LVPSGLAAVTVP--FLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDP---E----IGAGIAKLMR---PNTK 151 (395)
T ss_pred EECcHHHHHHHH--HHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCC---C----CHHHHHHhcC---cCce
Confidence 577899999988 78889999999999999998865 45678888877743 1 3477888887 6799
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccc-cC
Q 013839 198 FLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGL-YG 276 (435)
Q Consensus 198 ~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~-~G 276 (435)
+|++++|+||++ ...++++|+++|+++|+++|+|++|....+.. ++ + ..-++++.|.+|.++- .+
T Consensus 152 lV~lesPsNP~l---~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~------pl----~-~GaDivv~S~tKy~~Gh~d 217 (395)
T PRK05967 152 VVHTEAPGSNTF---EMQDIPAIAEAAHRHGAIVMMDNTWATPLYFR------PL----D-FGVDISIHAATKYPSGHSD 217 (395)
T ss_pred EEEEECCCCCCC---cHHHHHHHHHHHHHhCCEEEEECCccCceecC------hh----H-cCCCEEEEecccccCCCCC
Confidence 999999999975 67789999999999999999999986533211 22 1 2456999999999642 34
Q ss_pred CcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013839 277 HRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL 356 (435)
Q Consensus 277 ~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 356 (435)
...|+++ . +++ +.+++...........++...+.+..-+ +-+....++..++...+.+.|+++
T Consensus 218 ~~~G~v~--~-~~~----~~~~l~~~~~~~G~~~~p~da~l~~rgl----------~Tl~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 218 ILLGTVS--A-NEK----CWPQLLEAHGTLGLCAGPDDTYQILRGL----------RTMGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred eeEEEEE--c-CHH----HHHHHHHHHHHcCCCCCHHHHHHHHcCc----------ccHHHHHHHHHHHHHHHHHHHHhC
Confidence 4456553 3 666 4454544333333445555433333333 334556677777888888888877
Q ss_pred C
Q 013839 357 G 357 (435)
Q Consensus 357 ~ 357 (435)
+
T Consensus 281 p 281 (395)
T PRK05967 281 P 281 (395)
T ss_pred C
Confidence 5
No 233
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.82 E-value=7.9e-18 Score=163.41 Aligned_cols=157 Identities=16% Similarity=0.076 Sum_probs=116.2
Q ss_pred CCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCC
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPD 194 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~ 194 (435)
++++ +++||++|+.++ +.++ +++||+|+++.|+|..+...+...|++++.+++ +++++.+|+++++++++ +
T Consensus 47 ~~~v--~~~sgt~al~~~--l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~-d~~~~~~d~~~le~~i~---~ 118 (375)
T PRK11706 47 AKVL--LTPSCTAALEMA--ALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDI-RPDTMNIDETLIEAAIT---P 118 (375)
T ss_pred CeEE--EECCHHHHHHHH--HHHhCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHhcC---C
Confidence 3666 899999998877 4433 689999999999999999999999999999998 45667899999999987 5
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccc--ccc
Q 013839 195 SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYA--KSM 272 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S--K~~ 272 (435)
++++++++ ||||... ++++|.++|++||++||+|++|..+...+. .++..+ ..+.+.||+ |.+
T Consensus 119 ~tk~i~~~---~~~G~~~---~~~~i~~la~~~~i~vIeD~a~a~g~~~~~----~~~g~~-----~~~~~~Sf~~~K~l 183 (375)
T PRK11706 119 KTRAIVPV---HYAGVAC---EMDTIMALAKKHNLFVVEDAAQGVMSTYKG----RALGTI-----GHIGCFSFHETKNY 183 (375)
T ss_pred CCeEEEEe---CCCCCcc---CHHHHHHHHHHcCCEEEEECccccccccCC----eeeecC-----cCEEEEeCCCCccc
Confidence 67888764 5788764 467999999999999999999876652211 011111 123344443 999
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHHh
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQIA 303 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~ 303 (435)
+ +|.+.++++ .+++ +.++++...
T Consensus 184 ~-~g~gG~~~~---~~~~----~~~~~~~~~ 206 (375)
T PRK11706 184 T-AGEGGALLI---NDPA----LIERAEIIR 206 (375)
T ss_pred c-ccCCeEEEE---CCHH----HHHHHHHHH
Confidence 7 588766664 3677 665555443
No 234
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=5.6e-17 Score=156.47 Aligned_cols=218 Identities=11% Similarity=0.003 Sum_probs=150.1
Q ss_pred CCCCCCccc---HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH---
Q 013839 86 LESISASVS---TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI--- 159 (435)
Q Consensus 86 ~~Y~~~~g~---~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~--- 159 (435)
..|.. .|. ..|.+.++++..+. +++ +++||++|+.++ +.+++++||+|++++|.|.+....
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~g~~--------~~~--~~~sG~~Ai~~a--l~all~~GD~Vl~~~~~y~~t~~~~~~ 108 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELEGGA--------GCY--LYPSGLAAVTNS--ILAFVKAGDHVLMVDSAYEPTRYFCDI 108 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHhCCC--------cEE--EECcHHHHHHHH--HHHhcCCCCEEEEcCCCcHHHHHHHHH
Confidence 34653 454 48999999887322 455 799999999988 777899999999999999876543
Q ss_pred -HhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCC
Q 013839 160 -WRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQ 238 (435)
Q Consensus 160 -~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~ 238 (435)
+...|+++..++. . +.+.+++.++ +++++|++++|+||+|.. .++++|+++|+++|+++|+|++|.
T Consensus 109 ~~~~~gi~v~~~d~---~----~~e~l~~~i~---~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 109 VLKRMGVDITYYDP---L----IGEDIATLIQ---PNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred HHHhcCcEEEEECC---C----CHHHHHHhcC---CCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCc
Confidence 3456777665532 1 2277888887 679999999999999754 678899999999999999999986
Q ss_pred CccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc-CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHH
Q 013839 239 GFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY-GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILL 317 (435)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~-G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 317 (435)
...... ++ ..+-+++++|++|.++-+ +...|+++ + +++ .++.+...........++...+.
T Consensus 176 ~g~~~~------pl-----~~gaDivv~S~tK~l~G~~d~~gG~v~--~-~~~----~~~~l~~~~~~~G~~l~p~~a~~ 237 (377)
T TIGR01324 176 AGLLFK------PL-----EHGVDISIQAGTKYLVGHSDIMIGTVV--A-NAR----TWDQLREHSYLMGQMVDADDAYT 237 (377)
T ss_pred cccccC------cc-----ccCceEEEecCceeccCCCCceEEEEE--e-CHH----HHHHHHHHHHHhCCCCCHHHHHH
Confidence 433211 11 124578999999998643 45567775 3 666 54545433333333344443333
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 318 VATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 318 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+...+ +.+....++..++...+.+.|++.+
T Consensus 238 ~~rgl----------~tl~~R~~~~~~~a~~la~~L~~~p 267 (377)
T TIGR01324 238 TLRGL----------RTLGVRLKQHQESSLAIAKWLSEQP 267 (377)
T ss_pred HHhhh----------hhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33333 3344556777777777888887764
No 235
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=1.9e-17 Score=163.63 Aligned_cols=344 Identities=12% Similarity=0.003 Sum_probs=199.5
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC---CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS---EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++...||+..|.....-| ...+.+++++.+++... ....| ......+|.+.+++...+. .+.+. ++
T Consensus 40 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~q~~~~~~~~~~~~-~~~~~~~la~~L~~~~~~~------~~~v~--f~ 109 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVG-HRHPKVVQAIKEQADKLMHGPSGVI-YYESILKLAEELAEITPGG------LDCFF--FS 109 (433)
T ss_pred CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccCcccccc-CCHHHHHHHHHHHHhCCCC------CCEEE--Ee
Confidence 3567899998884211122 12233444444444321 11112 1222345555555554111 23566 88
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCC--C-----------CeeeeeecCCCC--CC--------
Q 013839 124 LSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQ--I-----------PERTYHYYDPDS--KS-------- 179 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g--~-----------~~~~v~~~~~~~--~~-------- 179 (435)
++|++|+..+..+........+|+..+-+|.+...... ..+ . .+..+|..+... .+
T Consensus 110 ~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (433)
T PRK08117 110 NSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFL 189 (433)
T ss_pred CcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHH
Confidence 99999999997654444334778888888876543221 111 0 112222211000 00
Q ss_pred cChHhHHHHhhc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhh
Q 013839 180 LDFAALMDDIKN--APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFL 256 (435)
Q Consensus 180 ~d~e~l~~~i~~--~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~ 256 (435)
-|++++++.+++ .+.+..+|++.....-.|... +++.+++|.++|++||+++|+||+|.+|+..+. ......+
T Consensus 190 ~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~---~~~~~~~- 265 (433)
T PRK08117 190 ECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE---WFAAQTF- 265 (433)
T ss_pred HHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc---chhHhhc-
Confidence 155667777653 234577888877666677765 788899999999999999999999998766541 1111111
Q ss_pred hcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 013839 257 EDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVK 336 (435)
Q Consensus 257 ~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~ 336 (435)
+. ..-+.++||.+| .|+++|++++ +++ +++.+.......+.+.+++++.++.+.|+.-. + .
T Consensus 266 gv---~pDi~t~sK~lg-~G~pigav~~---~~~----i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~------~--~ 326 (433)
T PRK08117 266 GV---VPDIMTIAKGIA-SGLPLSAVVA---SKE----LMEQWPLGSHGTTFGGNPVACAAALATLEVIK------E--E 326 (433)
T ss_pred CC---CCCEeehhhhcc-CCCcceeEEE---cHH----HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH------h--c
Confidence 11 112468999999 8999999964 777 76666543334455678888888878775321 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC-------C---HHHHHHHhhhccEEEeCCC------cEE
Q 013839 337 IMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL-------T---PYQVDRLAKEFHIYMTQDG------RIS 400 (435)
Q Consensus 337 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~-------~---~~~~~~ll~~~gI~i~pgg------Ris 400 (435)
...++++++.+++.+.|+++..........+..|.+..+.+ + ...+.+.+.++||.+.+.| ||+
T Consensus 327 ~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~ 406 (433)
T PRK08117 327 KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMI 406 (433)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEe
Confidence 34445555566666666554210001111223344443322 1 2234344456899987642 787
Q ss_pred e-ccCCCCcHHHHHHHHHHHHHhh
Q 013839 401 M-AGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 401 ~-~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
+ ...+++++++++++|.+++++.
T Consensus 407 p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 407 PPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHH
Confidence 5 2348999999999999998765
No 236
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.81 E-value=3.9e-17 Score=158.03 Aligned_cols=212 Identities=14% Similarity=0.079 Sum_probs=139.8
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH----HHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN----IWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 169 (435)
...|.+.++++.... ..+ .+.+|+.|+.++ +.++.|||+|++++|.|++... .+...|++++.
T Consensus 52 ~~~Le~~la~l~g~~-------~al---~~~SG~~Al~~~---l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~ 118 (380)
T PRK06176 52 RFALEELIADLEGGV-------KGF---AFASGLAGIHAV---FSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTI 118 (380)
T ss_pred HHHHHHHHHHHhCCC-------CEE---EECCHHHHHHHH---HHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEE
Confidence 567888888886322 123 578888888755 3567999999999999976643 34556777766
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .|+++++++++ +++++|++++|+||||.+.+ +++|.++|++||+++|+|++|.......
T Consensus 119 vd~-------~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~----- 180 (380)
T PRK06176 119 IDT-------SDLSQIKKAIK---PNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN----- 180 (380)
T ss_pred cCC-------CCHHHHHHhcC---cCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC-----
Confidence 643 37899999887 67899999999999999875 5689999999999999999987543221
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKS 329 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~ 329 (435)
++ + ...++++.|++|.++.+|..+|.++ ++.+++ +.++++..+.......+....+.+..-+.
T Consensus 181 -p~----~-~gaDivv~S~tK~l~g~~d~~gG~v-v~~~~~----~~~~~~~~~~~~G~~~~~~~~~l~~~gl~------ 243 (380)
T PRK06176 181 -PL----L-LGADIVVHSGTKYLGGHSDVVAGLV-TTNNEA----LAQEIAFFQNAIGGVLGPQDSWLLQRGIK------ 243 (380)
T ss_pred -cc----c-cCCCEEEecCceeccCCccceeeEE-EecHHH----HHHHHHHHHHHhcCCCCHHHHHHHHhccC------
Confidence 11 1 1346889999999976665444443 243555 55555554443333333333333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 330 LWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
.+....++..++...+.+.|+..+
T Consensus 244 ----tl~~R~~~~~~~a~~la~~L~~~p 267 (380)
T PRK06176 244 ----TLGLRMEAHQKNALCVAEFLEKHP 267 (380)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 223333444455566666666553
No 237
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.80 E-value=1.4e-18 Score=163.04 Aligned_cols=172 Identities=9% Similarity=-0.051 Sum_probs=128.0
Q ss_pred CCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCe
Q 013839 88 SISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPE 167 (435)
Q Consensus 88 Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 167 (435)
+.|..-+.++++.+++++ +.+ +-+. +++|+++++..+ +.+++.+||+|+++.|+|......+...|+++
T Consensus 55 ~~~~g~i~~~~~~~A~~~-ga~------~~~~--~~~Gst~a~~~~--l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~ 123 (294)
T cd00615 55 LDPTGPIKEAQELAARAF-GAK------HTFF--LVNGTSSSNKAV--ILAVCGPGDKILIDRNCHKSVINGLVLSGAVP 123 (294)
T ss_pred CCCChHHHHHHHHHHHHh-CCC------CEEE--EcCcHHHHHHHH--HHHcCCCCCEEEEeCCchHHHHHHHHHCCCEE
Confidence 334444678888888887 432 1222 588889998887 77788999999999999999888889999998
Q ss_pred eeeeecCCCC----CCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCC-ccC
Q 013839 168 RTYHYYDPDS----KSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQG-FAS 242 (435)
Q Consensus 168 ~~v~~~~~~~----~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~-~~~ 242 (435)
+.++....++ +.+|++++++++++. ++++++++++| ||||.+++ +++|+++|+++|+++|+|++|.. +.+
T Consensus 124 ~~v~~~~~~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~ 198 (294)
T cd00615 124 VYLKPERNPYYGIAGGIPPETFKKALIEH-PDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRF 198 (294)
T ss_pred EEecCccCcccCcCCCCCHHHHHHHHHhC-CCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhcc
Confidence 8886632222 378999999999753 46788888888 79999886 56999999999999999999864 333
Q ss_pred CCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEE
Q 013839 243 GDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLS 283 (435)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~ 283 (435)
.+. -.... ...+.++++.|++|++ +|++.|+++
T Consensus 199 ~~~--~~~~~----~~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 199 HPI--LPSSA----AMAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred Ccc--cCcch----hhcCCcEEEEchhccc--chHhHHHHH
Confidence 221 00011 1235689999999985 678766554
No 238
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=5.1e-17 Score=159.10 Aligned_cols=155 Identities=17% Similarity=0.097 Sum_probs=118.5
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh----CCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD----AQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~ 169 (435)
...|.+.++++.... ..+ ++++|++|+.++ +.+++.+||+|+++.+.|.+....+.. .|+++..
T Consensus 60 ~~~Le~~lA~l~g~~--------~~l--~~ssG~~Ai~~a--l~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~ 127 (425)
T PRK06084 60 NDVLEQRVAALEGGV--------GAL--AVASGMAAITYA--IQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRF 127 (425)
T ss_pred HHHHHHHHHHHhCCC--------cee--EehhHHHHHHHH--HHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEE
Confidence 468888888887322 223 689999999888 777789999999999999865544432 3544444
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .|++++++++. +++++|++++|+||||.+++ +++|.++|+++++++|+|++|......
T Consensus 128 ~d~-------~d~e~le~ai~---~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~------ 188 (425)
T PRK06084 128 AAH-------DDIAALEALID---ERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC------ 188 (425)
T ss_pred ECC-------CCHHHHHHHhc---cCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 432 48899999997 57899999999999999987 569999999999999999998633211
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
.++ + ..-++++.|++|.++.+|.++|.+++
T Consensus 189 ~p~----~-~gaDivv~S~tK~l~G~g~~~gG~v~ 218 (425)
T PRK06084 189 RPF----E-HGADIVVHSLTKYIGGHGTSIGGIVV 218 (425)
T ss_pred Chh----h-cCCCEEEECchhcccccccceeEEEE
Confidence 111 1 13469999999999989999998864
No 239
>PLN02651 cysteine desulfurase
Probab=99.80 E-value=1.1e-17 Score=162.10 Aligned_cols=257 Identities=15% Similarity=0.089 Sum_probs=167.2
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHH--HHHhCCCCEEEEcCCCChhhHHH---HhhCCCCee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEF--QRRFHPESHIYFPDPTWSNHHNI---WRDAQIPER 168 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~--~~~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~ 168 (435)
..++|+.+++++ +.. ++++. ++.|+++++.+++.. ...+.+||+|++....|+.+... +...|++++
T Consensus 45 ~~~~r~~la~~~-g~~-----~~~v~--~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 45 VEKARAQVAALI-GAD-----PKEII--FTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHh-CCC-----CCeEE--EeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 457788888877 332 45777 899999998877422 22346899999998777665433 345688888
Q ss_pred eeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCccc
Q 013839 169 TYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKD 248 (435)
Q Consensus 169 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~ 248 (435)
.++. ++++.+|+++++++++ ++++++++++++||||...+ +++|.++|+++|+++++|.++.... .+.
T Consensus 117 ~v~~--~~~~~~d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~-~~~--- 184 (364)
T PLN02651 117 YLPV--KSDGLVDLDELAAAIR---PDTALVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVGK-IPV--- 184 (364)
T ss_pred EEcc--CCCCcCCHHHHHHhcC---CCcEEEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhhCC-ccc---
Confidence 8887 3456789999999997 67899999999999999876 5589999999999999999954322 111
Q ss_pred HHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh-------hccccCCChhHHHHHHHH
Q 013839 249 AQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA-------RAMYGSPPVHGILLVATI 321 (435)
Q Consensus 249 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~q~~~~~~ 321 (435)
.+ +..+-++++.|..|.+|.+| +|++.+ +++ ....+.... .....+++..+..++.++
T Consensus 185 --~~----~~~~~D~~~~s~hK~~gp~G--~g~l~v---~~~----~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~a 249 (364)
T PLN02651 185 --DV----DDLGVDLMSISGHKIYGPKG--VGALYV---RRR----PRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAA 249 (364)
T ss_pred --Cc----ccCCCCEEEechhhhCCCCc--eEEEEE---cCC----CCCCCCccccCCCccCCccCCCccHHHHHHHHHH
Confidence 11 22245788899999765444 677764 444 222221110 112334555656666666
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCcccccc---C---cceeE--ecCCCHHHHHHHhhhccEE
Q 013839 322 LSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEK-LGSSLNWEHITN---Q---LGMFC--FSGLTPYQVDRLAKEFHIY 392 (435)
Q Consensus 322 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~---~---~g~~~--~~~~~~~~~~~ll~~~gI~ 392 (435)
|+.- .+..+..+++.++.++++.+.|++ ++ ++....+ . .+... ..+.+.+.+...|++ |.
T Consensus 250 l~~~------~~~~~~i~~~~~~l~~~l~~~l~~~~~---~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~ 318 (364)
T PLN02651 250 CELA------MKEMDYDEKHMKALRERLLNGLRAKLG---GVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VA 318 (364)
T ss_pred HHHH------HHhHHHHHHHHHHHHHHHHHHHHhhCC---CEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EE
Confidence 6432 133466778888888888888875 32 1333332 1 22322 346677766555554 77
Q ss_pred EeCC
Q 013839 393 MTQD 396 (435)
Q Consensus 393 i~pg 396 (435)
+..|
T Consensus 319 v~~g 322 (364)
T PLN02651 319 VSSG 322 (364)
T ss_pred EEch
Confidence 7543
No 240
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.79 E-value=1.7e-16 Score=154.73 Aligned_cols=193 Identities=15% Similarity=0.085 Sum_probs=132.1
Q ss_pred hHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEc
Q 013839 71 QCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFP 149 (435)
Q Consensus 71 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~ 149 (435)
+.+..+.+.+..+ . |.......++++++++++... +.+ .+++|++|+.++ +.++ +.+||+|+++
T Consensus 11 ~~~~~v~~~~~~~-~--~~~g~~~~~le~~la~~~g~~--------~~v--~~~sgt~al~~~--l~al~~~~Gd~Viv~ 75 (380)
T TIGR03588 11 DDIDAVVEVLKSD-F--LTQGPTVPAFEEALAEYVGAK--------YAV--AFNSATSALHIA--CLALGVGPGDRVWTT 75 (380)
T ss_pred HHHHHHHHHHhcC-C--ccCChhHHHHHHHHHHHHCCC--------eEE--EEcCHHHHHHHH--HHHcCCCCCCEEEeC
Confidence 3344444444333 2 333345789999999998432 223 577899999888 6666 7899999999
Q ss_pred CCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 013839 150 DPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP-DSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKG 228 (435)
Q Consensus 150 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 228 (435)
+|+|..+...++..|++++.+++ +++++.+|++++++.+++.+ ++++++++ .|++|... ++++|.++|++||
T Consensus 76 ~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~---~~~~i~~l~~~~~ 148 (380)
T TIGR03588 76 PITFVATANCALYCGAKVDFVDI-DPDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSV---DMQAIAALAKKHG 148 (380)
T ss_pred CcchHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccC---CHHHHHHHHHHcC
Confidence 99999999889999999999998 45567899999999997321 35677775 56788764 4679999999999
Q ss_pred ceeeeeccCCCcc-CCCCcccHHHHHHhhhcCCeEEEEeccc--ccccccCCcccEEEEEecChhHHHHHHHHHHH
Q 013839 229 HFPFFDMAYQGFA-SGDLDKDAQAIRIFLEDEHLIGCAQSYA--KSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQ 301 (435)
Q Consensus 229 ~~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~S--K~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~ 301 (435)
++||+|+++.... +++ . .+... +.+ ++.+.|++ |.++. | ..|.++ +.+++ +.++++.
T Consensus 149 ~~lI~D~a~a~g~~~~~---~--~~g~~-~~~--d~~~~S~~~~K~~~~-~-~GG~v~--~~~~~----~~~~~~~ 208 (380)
T TIGR03588 149 LKIIEDASHALGAEYGG---K--PVGNC-RYA--DATVFSFHPVKIITT-A-EGGAVT--TNDEE----LAERMRL 208 (380)
T ss_pred CEEEEECCCcccCccCC---E--eCCCc-ccc--ceEEEecCCCCcccc-c-CceEEE--ECCHH----HHHHHHH
Confidence 9999999975432 221 0 11110 112 45566654 88863 3 345664 54676 5555554
No 241
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.78 E-value=9.4e-17 Score=156.09 Aligned_cols=275 Identities=19% Similarity=0.172 Sum_probs=188.8
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH---hCCCCEEEEcCCCChhhH----HHHhhCCCC
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR---FHPESHIYFPDPTWSNHH----NIWRDAQIP 166 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~---~~~gd~Vlv~~p~y~~~~----~~~~~~g~~ 166 (435)
..+.|+.+++++.... +++|+ ++.+++.++..+ +..+ +.+||+|++.+-.|+... ...+..|++
T Consensus 45 ~~~~r~~la~~lg~~~-----~~~v~--~~~~~t~a~~~~--~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 115 (371)
T PF00266_consen 45 LEEAREALAKLLGAPP-----DEEVV--FTSNGTEALNAV--ASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAE 115 (371)
T ss_dssp HHHHHHHHHHHHTSST-----TEEEE--EESSHHHHHHHH--HHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCcc-----ccccc--cccccchhhhhh--hhccccccccccccccccccccccccccccccccchhh
Confidence 4578888999884331 14677 899999999998 4544 789999999998887665 233467889
Q ss_pred eeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCc
Q 013839 167 ERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLD 246 (435)
Q Consensus 167 ~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~ 246 (435)
+..++. +.+..+|++++++.+. +++++++++..+|-||...+. ++|.++|+++++++++|.+.. +...+.
T Consensus 116 v~~i~~--~~~~~~~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~pi---~~I~~~~~~~~~~~~vD~~~~-~g~~~i- 185 (371)
T PF00266_consen 116 VRVIPA--DPGGSLDLEDLEEALN---PDTRLVSISHVENSTGVRNPI---EEIAKLAHEYGALLVVDAAQS-AGCVPI- 185 (371)
T ss_dssp EEEEEE--GTTSSCSHHHHHHHHH---TTESEEEEESBETTTTBBSSH---HHHHHHHHHTTSEEEEE-TTT-TTTSS--
T ss_pred hccccc--cccchhhhhhhhhhhc---cccceEEeecccccccEEeee---ceehhhhhccCCceeEechhc-cccccc-
Confidence 988887 3345889999999998 789999999999999998875 489999999999999999943 333222
Q ss_pred ccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhh---------------------c
Q 013839 247 KDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIAR---------------------A 305 (435)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~---------------------~ 305 (435)
.+ +..+-++++.|..|.+|.+| +|++.+ +++ .++.++.... .
T Consensus 186 ----d~----~~~~~D~~~~s~~Kl~gp~G--~g~l~v---~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (371)
T PF00266_consen 186 ----DL----DELGADFLVFSSHKLGGPPG--LGFLYV---RPE----AIERLRPAKPGGGYLDFPSLQEYGLADDARRF 248 (371)
T ss_dssp -----T----TTTTESEEEEESTSTTSSST--EEEEEE---EHH----HHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGS
T ss_pred ----cc----cccccceeeecccccCCCCc--hhhhee---hhh----hhhccccccccccccccccchhcccccccccc
Confidence 11 22345788999999666566 688865 777 4444432111 0
Q ss_pred cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc-----cCcceeE--ecCCC
Q 013839 306 MYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT-----NQLGMFC--FSGLT 378 (435)
Q Consensus 306 ~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-----~~~g~~~--~~~~~ 378 (435)
...+++.....++..+++.- .+...++.+++..++.+++.+.|++++. +.+.. ...+... +.+.+
T Consensus 249 ~~GT~~~~~~~~l~~al~~~-----~~~g~~~i~~~~~~l~~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~ 320 (371)
T PF00266_consen 249 EGGTPNVPAIYALNEALKLL-----EEIGIERIRERIRELAEYLREALEELPG---IEVLGPDDEPRRPSIVSFNLPGSD 320 (371)
T ss_dssp SSSS--HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHTTT---EEESSSSCGGBGTTEEEEEETTSS
T ss_pred cccceeeehhhhHHHHHhhh-----hccccccchhhhhhHHHHHHhhhhcCCc---eeEeeecccccccceEEEeecCCC
Confidence 11245555455555555321 1245678888999999999999998864 33322 2233333 33677
Q ss_pred HHHHHHHhhhccEEEeCC--------------C--cEEeccC-CCCcHHHH
Q 013839 379 PYQVDRLAKEFHIYMTQD--------------G--RISMAGV-TTGNVNYL 412 (435)
Q Consensus 379 ~~~~~~ll~~~gI~i~pg--------------g--Ris~~~~-~~e~i~~~ 412 (435)
.+.+...|++.||.+..| | |+|+... +.+|++++
T Consensus 321 ~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 321 ADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred HHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 777766777789999874 2 9997543 66777654
No 242
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=1.1e-16 Score=157.20 Aligned_cols=344 Identities=13% Similarity=0.085 Sum_probs=197.2
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC--CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE--FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.++...+|+..|.....-| ...+.+++++.+++.... ...+.+.....++-+.+++...+.. .+++. +++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~-----~~~v~--f~~ 108 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNTG-HRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDF-----AKKTI--FVT 108 (425)
T ss_pred CCCCEEEEccccHHhhccC-CCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCC-----CCEEE--ECC
Confidence 4678899998874211112 122334444444443211 1111122222344444444432110 13677 899
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh-CCC-------------CeeeeeecCCCCCCcC----hHhHH
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD-AQI-------------PERTYHYYDPDSKSLD----FAALM 186 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~~~d----~e~l~ 186 (435)
+|++|++.+..+........+|+....+|.+....... .|. .++.+|..+. ..+.+ ++.++
T Consensus 109 SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~l~ 187 (425)
T PRK07495 109 TGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQSLAALD 187 (425)
T ss_pred chHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHHHHHHH
Confidence 99999999976655554447899888888776432211 110 1223333111 11233 44556
Q ss_pred HHhhc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 187 DDIKN--APDSSFFLLHPSAHNPTGV-DPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 187 ~~i~~--~~~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
+.+.+ .+.+.+++++...+.-+|. .++.+.+++|.++|++||+++|+||+|.+|...+. .+... ..+...
T Consensus 188 ~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~---~~a~~----~~gv~p 260 (425)
T PRK07495 188 KLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK---LFAME----HHEVAA 260 (425)
T ss_pred HHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC---ceeec----ccCCCC
Confidence 66642 2244666666544333884 57899999999999999999999999988866541 11111 112233
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
-+.++||.++ .|+++|++++ +++ +.+.+.......+.+.+++++.++.+.++.-. + ....++.+
T Consensus 261 Di~tlsK~l~-~G~pigav~~---~~~----i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~------~--~~l~~~~~ 324 (425)
T PRK07495 261 DLTTMAKGLA-GGFPLAAVTG---RAE----IMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIE------E--EDLCERAN 324 (425)
T ss_pred CEEeehhhhc-CCccceEEEE---cHH----HHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH------h--chHHHHHH
Confidence 4688999998 8999999974 777 77666543344566778888886666654211 0 12333444
Q ss_pred HHHHHHHHHHHhhC--CCCCccccccCcceeEecCCC-----------HHHHHHHhhhccEEEeCC---C---cEEec-c
Q 013839 344 RKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGLT-----------PYQVDRLAKEFHIYMTQD---G---RISMA-G 403 (435)
Q Consensus 344 ~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~ll~~~gI~i~pg---g---Ris~~-~ 403 (435)
+..+++.+.|+++- .| .+..... .|++.|+.+. ...+...+.++|+.+.+. | ||... .
T Consensus 325 ~~g~~l~~~L~~l~~~~~-~i~~vrG-~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~ 402 (425)
T PRK07495 325 QLGNRLKQRLASLRETVP-EIADIRG-PGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPIT 402 (425)
T ss_pred HHHHHHHHHHHHHHhhCC-Ceeeeec-CceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCc
Confidence 44444444444331 11 1112222 3778887541 123433445689999763 2 67632 3
Q ss_pred CCCCcHHHHHHHHHHHHHhhh
Q 013839 404 VTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 404 ~~~e~i~~~~~~l~~~l~~~~ 424 (435)
.+++++++++++|.+++++..
T Consensus 403 it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 403 IQDDVFAEALDILEASILEAS 423 (425)
T ss_pred cCHHHHHHHHHHHHHHHHHHh
Confidence 489999999999999997654
No 243
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.78 E-value=1.2e-16 Score=155.34 Aligned_cols=209 Identities=12% Similarity=0.074 Sum_probs=149.5
Q ss_pred ecCCchh-HHHHHHHHHHHh--C-CCCEEEEcCCCChhhHHHHhhCCCCeeeeee-cCCCCCCcChHhHHHHhhcCCCCc
Q 013839 122 QALSGTG-ACRLFAEFQRRF--H-PESHIYFPDPTWSNHHNIWRDAQIPERTYHY-YDPDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 122 ~t~gg~~-a~~~~~~~~~~~--~-~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
+++++|+ ++.++ ++++= . +||.|+++.-++......+...|++++.++. .+++++.+|++++++++++..+++
T Consensus 128 ~v~~~Tg~al~la--L~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~ka 205 (444)
T TIGR03531 128 VVPLATGMSLSLC--LSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDN 205 (444)
T ss_pred EECCHHHHHHHHH--HHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCC
Confidence 6889984 66555 44321 2 5899999999998889999999999999985 256679999999999998432255
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhh----hcCCeEEEEecccccc
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFL----EDEHLIGCAQSYAKSM 272 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~s~SK~~ 272 (435)
.++++.+|+ |+.....+++++|.++|++||+++|+|++|..... ....+. ..+.-.+++.|++|.+
T Consensus 206 i~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~--------~~~~~~~~g~~~Grad~vv~s~hK~l 275 (444)
T TIGR03531 206 ILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN--------KYMELINKAIKVGRVDAVVSSTDKNF 275 (444)
T ss_pred EEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh--------hhhhhhhccccccCCCeEEEeCccCC
Confidence 666665554 56656788999999999999999999999874321 111111 1112267788999999
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQN 352 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 352 (435)
.++|+ |+++. +.+++ +++.+.+.... ...+.+.|.+...++..+. +..+++.++..++++++.+.
T Consensus 276 ~~pg~--Gg~I~-~~d~e----l~~~i~~~y~g--~~~~s~~~~~~~~ll~~G~------~g~~~li~~~~~~a~~l~~~ 340 (444)
T TIGR03531 276 MVPVG--GAIIY-SFDEN----FIQEISKSYPG--RASASPSLDVLITLLSLGS------KGYLELLKERKEMYKYLKEL 340 (444)
T ss_pred CCCCC--EEEEE-ECCHH----HHHHHHHhccC--CCCChHHHHHHHHHHHhCH------HHHHHHHHHHHHHHHHHHHH
Confidence 98887 77663 55777 66666654322 2244567777777775543 66777888888888888888
Q ss_pred HHhhC
Q 013839 353 LEKLG 357 (435)
Q Consensus 353 l~~~~ 357 (435)
|+++.
T Consensus 341 L~~l~ 345 (444)
T TIGR03531 341 LQKLA 345 (444)
T ss_pred HHHHH
Confidence 87653
No 244
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.77 E-value=3.8e-16 Score=153.62 Aligned_cols=200 Identities=9% Similarity=-0.016 Sum_probs=132.7
Q ss_pred eecceecCCCC-CcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHH
Q 013839 55 LGVGAYRDDKG-RPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLF 133 (435)
Q Consensus 55 l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~ 133 (435)
|+.|.|..+.. +..+.+.+.++...+..+ ...+++ ...+|++++++++... +++ ++++|++|+.++
T Consensus 28 ~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~-~~~~G~--~~~~fe~~lA~~~g~~--------~~v--~~~sGt~al~~a 94 (438)
T PRK15407 28 FVPGKSPIPPSGKVIDAKELQNLVDASLDF-WLTTGR--FNDAFEKKLAEFLGVR--------YAL--LVNSGSSANLLA 94 (438)
T ss_pred ccCCCCCCCcCccCCCHHHHHHHHHHHHhC-cccCCh--hHHHHHHHHHHHhCCC--------eEE--EECCHHHHHHHH
Confidence 68887622211 122223344444444433 222333 2478999999998322 455 799999998887
Q ss_pred HHHHH-------HhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC
Q 013839 134 AEFQR-------RFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN 206 (435)
Q Consensus 134 ~~~~~-------~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N 206 (435)
+..+. .+.|||+|+++.|+|..+...+...|++++.+++ +.+++.+|++.+++.+. +++++|++++
T Consensus 95 L~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdv-d~~~~~id~~~le~~i~---~~tkaVi~~~--- 167 (438)
T PRK15407 95 FSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDV-ELPTYNIDASLLEAAVS---PKTKAIMIAH--- 167 (438)
T ss_pred HHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHHcC---cCCeEEEEeC---
Confidence 32221 2579999999999999999999999999999987 34578899999999987 6788888754
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecc--cccccccCCcccEEEE
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSY--AKSMGLYGHRVGCLSI 284 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--SK~~g~~G~RvG~~~~ 284 (435)
++|. +.++++|.++|++||++||+|+++........ ..+. ..+ .+.+.|| +|.+. .|. .|+++
T Consensus 168 ~~G~---p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g----~~~G---~~g--d~~~fSf~~~k~~~-~ge-GG~l~- 232 (438)
T PRK15407 168 TLGN---PFDLAAVKAFCDKHNLWLIEDNCDALGSTYDG----RMTG---TFG--DIATLSFYPAHHIT-MGE-GGAVF- 232 (438)
T ss_pred CCCC---hhhHHHHHHHHHHCCCEEEEECccchhhhcCC----eeee---ccC--ceEEEeCCCCCCcc-ccC-ceEEE-
Confidence 4554 34688999999999999999999754332110 0111 112 3445555 47675 454 37775
Q ss_pred EecChh
Q 013839 285 LCVDSK 290 (435)
Q Consensus 285 ~~~~~~ 290 (435)
+.+++
T Consensus 233 -t~d~~ 237 (438)
T PRK15407 233 -TNDPL 237 (438)
T ss_pred -ECCHH
Confidence 55665
No 245
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.77 E-value=2.2e-16 Score=154.69 Aligned_cols=344 Identities=10% Similarity=0.001 Sum_probs=190.2
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcC-CCCCCCCCCcccHHHHHHHHHhHcCCCCccc-cCCCeeeEe-c
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-SEFLESISASVSTKMVEESVKLVYGKDSDVV-KEGRSAGVQ-A 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~v~~~~-t 123 (435)
.+++..||+..|.-...-| ...+.+++++.+++.. +.... .....+.+..+++.+...-..+. ..+.+. + +
T Consensus 32 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~---~~~~~~~~~~lae~l~~~~~~~~~~~~~~~--f~~ 105 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNYG-HNNPKLKQALIDYLADDGIIHS---LDMATEAKREFLETFNEIILKPRGLDYKVQ--FPG 105 (412)
T ss_pred CCCCEEEEcccchhhccCC-CCCHHHHHHHHHHHhhccceec---cccCcHHHHHHHHHHHHhccCccCCCceEE--EeC
Confidence 3578899998875211111 2233444444455432 11111 01112334444544422100000 012343 4 5
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh-CCC------------CeeeeeecCCCCC-CcChHhHHHHh
Q 013839 124 LSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD-AQI------------PERTYHYYDPDSK-SLDFAALMDDI 189 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~-~~d~e~l~~~i 189 (435)
++|++|++.+.++........+|+....+|.+....... .|. .+..+|..+.... .-+++.+++.+
T Consensus 106 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~ 185 (412)
T TIGR02407 106 PTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLL 185 (412)
T ss_pred CCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHH
Confidence 899999999976665554447899999888777543221 110 1222332110000 02466788877
Q ss_pred hcCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEE
Q 013839 190 KNAP---DSSFFLLHPSAHNPTGV-DPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCA 265 (435)
Q Consensus 190 ~~~~---~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 265 (435)
.+.. ++..+|++...+++.|. ..+++.+++|.++|++||+++|+||++.+|+..+ ..+..... +.... +
T Consensus 186 ~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~~~~-~v~PD---i 258 (412)
T TIGR02407 186 EDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG---TFFSFEPA-GIEPD---I 258 (412)
T ss_pred HhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhHHhccc-CCCCC---E
Confidence 6432 35688888888899998 5689999999999999999999999998776543 11122111 21122 3
Q ss_pred eccccccccc-CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhC----ChhhHHHHHHHHHHHHH
Q 013839 266 QSYAKSMGLY-GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILS----DPNLKSLWIDEVKIMAD 340 (435)
Q Consensus 266 ~s~SK~~g~~-G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~----~~~l~~~~~~~~~~~~~ 340 (435)
.++||.++ + |+++|++++ +++ + ..+.......+.+.+.++..++.+.++ +++ +.+++++..+
T Consensus 259 ~~~~K~lg-~~G~pigav~~---~~~----~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~----l~~~~~~~g~ 325 (412)
T TIGR02407 259 VCLSKSIS-GYGLPLALTLI---KPE----L-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDA----FEKAVQRKSE 325 (412)
T ss_pred EEechhcc-CCccceeEEEE---chh----h-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccH----HHHHHHHHHH
Confidence 35889998 6 999999974 665 4 333222223344555665444344332 221 2233333333
Q ss_pred HHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCC----HHHHHHHhhhccEEEeCCC------cEEecc-CCCCcH
Q 013839 341 RIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLT----PYQVDRLAKEFHIYMTQDG------RISMAG-VTTGNV 409 (435)
Q Consensus 341 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~ll~~~gI~i~pgg------Ris~~~-~~~e~i 409 (435)
+++++.+.+.+ .++. +....+..|++.|+.+. ...+...+.++||.+.+.+ ||+... .+++++
T Consensus 326 ~l~~~l~~l~~---~~~~---~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i 399 (412)
T TIGR02407 326 IIQERLDRIVA---EYPE---LIKQVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETL 399 (412)
T ss_pred HHHHHHHHHHh---hCCC---ceEeeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHH
Confidence 33333322222 2220 11223456788888763 2234334456899997643 776532 489999
Q ss_pred HHHHHHHHHHHHh
Q 013839 410 NYLANAIHEVTRS 422 (435)
Q Consensus 410 ~~~~~~l~~~l~~ 422 (435)
++++++|.+++++
T Consensus 400 ~~~~~~l~~~l~~ 412 (412)
T TIGR02407 400 QQGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998853
No 246
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.77 E-value=1.7e-16 Score=153.30 Aligned_cols=251 Identities=14% Similarity=0.052 Sum_probs=162.1
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhhHHHHhhCCCCeeee
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNHHNIWRDAQIPERTY 170 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v 170 (435)
....++++.+++++. . ++++ ++.+|++|+.++ +..+ +.+||+|+++.++|..+...+...|++++.+
T Consensus 18 ~~~~~~~~~la~~~~-~-------~~~~--~~~sgt~al~~~--l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~ 85 (352)
T cd00616 18 PKVREFEKAFAEYLG-V-------KYAV--AVSSGTAALHLA--LRALGIGPGDEVIVPSFTFVATANAILLLGATPVFV 85 (352)
T ss_pred HHHHHHHHHHHHHhC-C-------CeEE--EECCHHHHHHHH--HHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEE
Confidence 457899999999983 2 1444 688999998888 5555 5799999999999999988899999999999
Q ss_pred eecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHH
Q 013839 171 HYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQ 250 (435)
Q Consensus 171 ~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~ 250 (435)
+. +++++.+|++++++.+. +++++++++ ||+|...+ +++|.++|+++++++|+|+++........ .
T Consensus 86 ~~-~~~~~~~d~~~l~~~i~---~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~~-~--- 151 (352)
T cd00616 86 DI-DPDTYNIDPELIEAAIT---PRTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYKG-R--- 151 (352)
T ss_pred ec-CCCcCCcCHHHHHHhcC---cCCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeECC-E---
Confidence 88 34468899999999886 577888874 57998765 56888999999999999999753322110 0
Q ss_pred HHHHhhhcCCeEEEEeccc--ccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccc---------------cCCChh
Q 013839 251 AIRIFLEDEHLIGCAQSYA--KSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMY---------------GSPPVH 313 (435)
Q Consensus 251 ~~~~~~~~~~~~i~~~s~S--K~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~---------------~~~~~~ 313 (435)
.+ +. ...+.+.|++ |.++ +.+.|+++ +.+++ +.+.++....... ..++.+
T Consensus 152 ~~----~~-~~d~~~~S~~~~K~~~--~~~gg~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (352)
T cd00616 152 KV----GT-FGDAGAFSFHPTKNLT--TGEGGAVV--TNDEE----LAERARLLRNHGRDRDRFKYEHEILGYNYRLSEI 218 (352)
T ss_pred Ec----cc-CcceeEEcCCCCCCCc--ccCceEEE--ECCHH----HHHHHHHHHHcCCCCCCCccccceeeeccCcCHH
Confidence 01 11 1235566665 8874 33457775 44566 5555544322111 111222
Q ss_pred HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC------cceeEe-c----CCCHHHH
Q 013839 314 GILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ------LGMFCF-S----GLTPYQV 382 (435)
Q Consensus 314 ~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~------~g~~~~-~----~~~~~~~ 382 (435)
.++..+. . .+.+++..++.+++.+++.+.|++++. +.+..+. ...+.+ + +.+.+.+
T Consensus 219 ---~aa~~~~--~-----l~~~~~~~~~~~~~~~~~~~~L~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 285 (352)
T cd00616 219 ---QAAIGLA--Q-----LEKLDEIIARRREIAERYKELLADLPG---IRLPDVPPGVKHSYHLYVIRLDPEAGESRDEL 285 (352)
T ss_pred ---HHHHHHH--H-----HHhhHHHHHHHHHHHHHHHHHhcCCCC---ccCCCCCCCCceeeEEEEEEECCcCCCCHHHH
Confidence 1111111 1 133456667777888888888887632 3332221 122222 1 2456666
Q ss_pred HHHhhhccEEEe
Q 013839 383 DRLAKEFHIYMT 394 (435)
Q Consensus 383 ~~ll~~~gI~i~ 394 (435)
.+.|+++||.+.
T Consensus 286 ~~~L~~~gI~~~ 297 (352)
T cd00616 286 IEALKEAGIETR 297 (352)
T ss_pred HHHHHHCCCCee
Confidence 556677899764
No 247
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=5.7e-16 Score=144.36 Aligned_cols=333 Identities=15% Similarity=0.150 Sum_probs=212.9
Q ss_pred CCCCCeeeeecceecCCCCCc--ccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRP--VVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.+++..|||..|.--..-|+. ...+.+++....+.......|.+. ..+|.+.+++... . .+++. +.+
T Consensus 39 ~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~--~~~la~~L~~~s~--~-----~d~vf--f~N 107 (404)
T COG4992 39 QQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEP--QAELAEKLVELSP--F-----ADRVF--FCN 107 (404)
T ss_pred CCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChH--HHHHHHHHHhhCc--c-----ccEEE--EcC
Confidence 467899999888631222222 222333333333332223323332 2234444444431 1 45788 999
Q ss_pred CchhHHHHHHHHHHHhCC---CCEEEEcCCCChhhHHHHhhCCCCe-------------eeeeecCCCCCCcChHhHHHH
Q 013839 125 SGTGACRLFAEFQRRFHP---ESHIYFPDPTWSNHHNIWRDAQIPE-------------RTYHYYDPDSKSLDFAALMDD 188 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~---gd~Vlv~~p~y~~~~~~~~~~g~~~-------------~~v~~~~~~~~~~d~e~l~~~ 188 (435)
+|++|++.+.++...+.. ..+|+....+|.+-....-..+.+. ..+|. -|++.++++
T Consensus 108 SGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~a 180 (404)
T COG4992 108 SGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAA 180 (404)
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHH
Confidence 999999999888877664 2478888878765533222222221 22222 288999999
Q ss_pred hhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEec
Q 013839 189 IKNAPDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQS 267 (435)
Q Consensus 189 i~~~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 267 (435)
++ +++.+|++..-+-..|+.. +++.++++.++|++||+++|.||+..+++..+ ..+....+ +...+ +.+
T Consensus 181 i~---~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG---k~fA~e~~-gV~PD---I~t 250 (404)
T COG4992 181 ID---EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG---KLFAYEHY-GVEPD---ILT 250 (404)
T ss_pred hc---cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc---hHHHHHHh-CCCCC---EEE
Confidence 98 6899999999999999988 55669999999999999999999998888765 34444443 22122 335
Q ss_pred ccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 013839 268 YAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRT 347 (435)
Q Consensus 268 ~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 347 (435)
+.|.+| .|..+|.++ + .+. +.+.+..-....+++-++++..++.+.|+.- ..+...++.+++.+
T Consensus 251 laK~Lg-GG~PigA~l--a-~~~----~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l--------~~e~ll~~v~~~g~ 314 (404)
T COG4992 251 LAKALG-GGFPIGAML--A-TEE----IASAFTPGDHGSTFGGNPLACAVALAVLEVL--------LEEGLLENVREKGE 314 (404)
T ss_pred eecccc-CCccceeeE--E-chh----hhhcCCCCcccCCCCcCHHHHHHHHHHHHHH--------cchhHHHHHHHHHH
Confidence 799999 889999996 3 554 4555554444567788888888877777531 12345566677777
Q ss_pred HHHHHHHhhCCCCC-ccccccCcceeEecCC--C--HHHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHHHHH
Q 013839 348 TLRQNLEKLGSSLN-WEHITNQLGMFCFSGL--T--PYQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLANAIH 417 (435)
Q Consensus 348 ~l~~~l~~~~~~~~-~~~~~~~~g~~~~~~~--~--~~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~ 417 (435)
+|.+.|+++.-+.. ++-++.. |+++=+.+ + ...+.+.+.++|+.+.+.| |+... .++++++++++++|.
T Consensus 315 ~~~~~L~~l~~~~~~v~~vRG~-GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~ 393 (404)
T COG4992 315 YLLQRLRELKRRYPLVKEVRGR-GLMIGIELKEPYRARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDALE 393 (404)
T ss_pred HHHHHHHHHhhcCCceeeeecc-eeEEEEEecCcccHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHHHHH
Confidence 77777777642211 2222222 33333323 2 2344444567899999887 88743 348999999999999
Q ss_pred HHHHhhh
Q 013839 418 EVTRSEQ 424 (435)
Q Consensus 418 ~~l~~~~ 424 (435)
++++...
T Consensus 394 ~~l~~~~ 400 (404)
T COG4992 394 RALAAAS 400 (404)
T ss_pred HHHHHhh
Confidence 9997654
No 248
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.76 E-value=6.3e-16 Score=152.22 Aligned_cols=350 Identities=10% Similarity=0.043 Sum_probs=193.1
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcC-CCCCC-CCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEe-c
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-SEFLE-SISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQ-A 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~-t 123 (435)
.++...||+..|.-...-|. ..+++++++.+++.. +.... +-......+|-+.+++.+...... .+.+. + +
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~---~~~~~--f~~ 109 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNYGH-NNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGL---DYKVQ--FTG 109 (425)
T ss_pred CCCCEeeecccchhhccCCC-CCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCC---CceEE--EeC
Confidence 36788999988752111221 223344444454432 11111 111111223444444433111100 12343 4 4
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhC----------CC---CeeeeeecCCCCC-CcChHhHHHHh
Q 013839 124 LSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDA----------QI---PERTYHYYDPDSK-SLDFAALMDDI 189 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~----------g~---~~~~v~~~~~~~~-~~d~e~l~~~i 189 (435)
++|++|++.+..+........+|+....+|.+.....-.. +. .+..+|..+.... .-|++++++.+
T Consensus 110 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l 189 (425)
T PRK09264 110 PTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLL 189 (425)
T ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHH
Confidence 7999999999766655544478888888887764322211 11 1233333110000 12677888888
Q ss_pred hcCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEE
Q 013839 190 KNAP---DSSFFLLHPSAHNPTGV-DPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCA 265 (435)
Q Consensus 190 ~~~~---~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 265 (435)
.+.. +...+|++.....-.|. ..+++.+++|.++|++||+++|+||++.+++..+ ..+....+ +.... +
T Consensus 190 ~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG---~~~~~~~~-~v~PD---i 262 (425)
T PRK09264 190 EDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG---TFFSFERA-GITPD---I 262 (425)
T ss_pred HhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc---HHHHHhhc-CCCCC---E
Confidence 6431 34677777766776786 4588999999999999999999999998876543 12222222 22222 3
Q ss_pred ecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 013839 266 QSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRK 345 (435)
Q Consensus 266 ~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 345 (435)
.++||.++..|+++|++++ +++ + ..+.......+.+.+.++..++.+.+..- + .-....++.+++
T Consensus 263 ~t~~K~l~~~G~pigav~~---~~~----i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~-----~--~~~~l~~~~~~~ 327 (425)
T PRK09264 263 VTLSKSISGYGLPMALVLI---KPE----L-DVWKPGEHNGTFRGNNLAFVTATAALEEY-----W--SDDAFEKEVKAK 327 (425)
T ss_pred EEeccccCCCccceEEEEE---chh----h-hccCCCccCCCCCCCHHHHHHHHHHHHHH-----H--hhhHHHHHHHHH
Confidence 4679999955999999974 665 4 23322122334445555555554555211 0 011344445555
Q ss_pred HHHHHHHHHhhC--CCCCccccccCcceeEecCCC----HHHHHHHhhhccEEEeCCC----cEEec---cCCCCcHHHH
Q 013839 346 RTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGLT----PYQVDRLAKEFHIYMTQDG----RISMA---GVTTGNVNYL 412 (435)
Q Consensus 346 ~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~~----~~~~~~ll~~~gI~i~pgg----Ris~~---~~~~e~i~~~ 412 (435)
.+++.+.|+++. .+ .+.......|++.++.+. ...+...+.++||.+.+.| ||.++ ..++++++++
T Consensus 328 g~~l~~~l~~l~~~~~-~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~ 406 (425)
T PRK09264 328 GELVRERLEEIAAKYP-GLGAEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEG 406 (425)
T ss_pred HHHHHHHHHHHHHhCC-CceecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHH
Confidence 555555554431 11 011112335667777662 1233334456899998754 44443 2478999999
Q ss_pred HHHHHHHHHhhhh
Q 013839 413 ANAIHEVTRSEQE 425 (435)
Q Consensus 413 ~~~l~~~l~~~~~ 425 (435)
+++|.+++++..+
T Consensus 407 ~~~l~~~l~~~~~ 419 (425)
T PRK09264 407 LDILEEAVAEVLA 419 (425)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999876543
No 249
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.76 E-value=6.9e-16 Score=152.13 Aligned_cols=344 Identities=10% Similarity=-0.001 Sum_probs=196.2
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCC---CCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEF---LESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++...+|+..|.-...-|.. .+++++++.+++..... ..|.. .-..++.+.+++...+. -+++. ++
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~~~~~~-~~~~~la~~l~~~~p~~------~~~v~--f~ 108 (423)
T PRK05964 39 ADGRELIDAISSWWVATHGHN-HPYIDQAIREQLDRLDHVIFAGFTH-EPAERLAQRLVALTPGG------LDHVF--FS 108 (423)
T ss_pred CCCCEEEEcchhHHhccCCCC-CHHHHHHHHHHHhhCCCccccccCC-HHHHHHHHHHHHhCCCC------CCEEE--Ee
Confidence 366889999887421212212 23444444445442211 11221 11223444444433111 24677 89
Q ss_pred CCchhHHHHHHHHHHHh----C-CC-CEEEEcCCCChhhHHHHhhCCC-------------CeeeeeecCCCCCCcChHh
Q 013839 124 LSGTGACRLFAEFQRRF----H-PE-SHIYFPDPTWSNHHNIWRDAQI-------------PERTYHYYDPDSKSLDFAA 184 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~----~-~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~e~ 184 (435)
++|++|++.+.++.... . +| .+|+....+|.+.......... ....++..+.+....+++.
T Consensus 109 ~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 188 (423)
T PRK05964 109 DSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDA 188 (423)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHH
Confidence 99999999997665544 1 33 6899888888776433221110 1122222101101122788
Q ss_pred HHHHhhcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeE
Q 013839 185 LMDDIKNAPDSSFFLLHPS-AHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLI 262 (435)
Q Consensus 185 l~~~i~~~~~~~~~v~~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (435)
+++.+.+.+++..++++.. .++.+|... +.+.+++|.++|++||+++|+||++.+++..+ .......+ +....
T Consensus 189 l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~~-~v~pD- 263 (423)
T PRK05964 189 LEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG---TLFACEQA-GVSPD- 263 (423)
T ss_pred HHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chhHHHhc-CCCCC-
Confidence 8888865545666777755 577788776 89999999999999999999999998776543 11122111 21122
Q ss_pred EEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHH------hhccccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 013839 263 GCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI------ARAMYGSPPVHGILLVATILSDPNLKSLWIDEVK 336 (435)
Q Consensus 263 i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~ 336 (435)
+.++||.++..++++|++++ +++ +.+.+... ....+.+.+.++..++.+.++.-. .+
T Consensus 264 --i~~~~K~l~gG~~p~~av~~---~~~----i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~--------~~ 326 (423)
T PRK05964 264 --IMCLSKGLTGGYLPLAATLC---TAE----IFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFE--------DE 326 (423)
T ss_pred --eeeeehhhhcCcccceEEEE---cHH----HHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHH--------hc
Confidence 24678999844489999864 788 77666431 112334566676666666664210 12
Q ss_pred HHHHHHHHHHHHHHHHHHhhC-CCCCccccccCcceeEe-c-CCC----HHHHHHHhhhccEEEeCCC---cEEec-cCC
Q 013839 337 IMADRIQRKRTTLRQNLEKLG-SSLNWEHITNQLGMFCF-S-GLT----PYQVDRLAKEFHIYMTQDG---RISMA-GVT 405 (435)
Q Consensus 337 ~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~g~~~~-~-~~~----~~~~~~ll~~~gI~i~pgg---Ris~~-~~~ 405 (435)
...++..+..+.+.+.|+++. .+ .+......|.++.+ + +-+ ...+...+.++||.+.+.+ ||+.. ..+
T Consensus 327 ~~~~~~~~~g~~l~~~l~~l~~~~-~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~~~lR~~p~l~~t 405 (423)
T PRK05964 327 PVLERVAALSAGLAEGLEPFRDLP-GVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLGNTIYLMPPYIIT 405 (423)
T ss_pred CHHHHHHHHHHHHHHHHHhhccCC-CeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecCCEEEEeCCcccC
Confidence 344556666666677666552 11 11112233332221 1 111 2334444456899998865 88754 248
Q ss_pred CCcHHHHHHHHHHHHHhh
Q 013839 406 TGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 406 ~e~i~~~~~~l~~~l~~~ 423 (435)
++++++++++|.++++++
T Consensus 406 ~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 406 AEELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999998763
No 250
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.76 E-value=1.9e-16 Score=139.31 Aligned_cols=324 Identities=17% Similarity=0.180 Sum_probs=211.4
Q ss_pred CeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHH
Q 013839 51 YKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGAC 130 (435)
Q Consensus 51 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~ 130 (435)
..+||.+-.. ..|...+++++....-++.- |+...-...|.+..|+.. |+. .++++.+||.++
T Consensus 22 ~~vDLRSDTv------T~PTdeMr~am~eA~vgDdV-yGeD~tt~rLE~~vA~l~-GKE---------AgLFv~SGTmgN 84 (384)
T KOG1368|consen 22 RSVDLRSDTV------TVPTDEMRRAMAEASVGDDV-YGEDPTTNRLEQRVAELF-GKE---------AGLFVPSGTMGN 84 (384)
T ss_pred eccccccccc------cCChHHHHHHHhhcccCccc-ccCCccHHHHHHHHHHHh-Ccc---------ceeeeccccccc
Confidence 4455655542 56777788777766544232 555545668888888886 542 144788888888
Q ss_pred HHHHHHHHHhC-CCCEEEEcCCCChh-hH--HHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC-----CCCcEEEEe
Q 013839 131 RLFAEFQRRFH-PESHIYFPDPTWSN-HH--NIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA-----PDSSFFLLH 201 (435)
Q Consensus 131 ~~~~~~~~~~~-~gd~Vlv~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-----~~~~~~v~~ 201 (435)
.++ ++..|. +|.+|++.+-++.- |. .+....|+.+.++. +++++.+|+++|+.++.-. .+.+++|++
T Consensus 85 lla--Im~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~--~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIcl 160 (384)
T KOG1368|consen 85 LLA--IMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVK--NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICL 160 (384)
T ss_pred HHH--HHHHhcCCCceEEeccchheeehhccChhhhccceeEeee--eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEe
Confidence 777 777776 99999999866532 21 23445566666665 4777899999999998732 356899999
Q ss_pred CCCCCCCC-CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCccc
Q 013839 202 PSAHNPTG-VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVG 280 (435)
Q Consensus 202 ~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG 280 (435)
.|-+|-+| .++|.+++.++.++|++||+.+-.|.+-..-..- ....++..+....|.+-+ .+||.+|.| ||
T Consensus 161 ENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAav---asgV~vk~i~~~fDSVsi--CLSKglgAP---VG 232 (384)
T KOG1368|consen 161 ENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAV---ASGVPVKKICSAFDSVSI--CLSKGLGAP---VG 232 (384)
T ss_pred eccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHH---HcCCCHHHHHHhhhhhhh--hhhccCCCC---cc
Confidence 99888777 9999999999999999999999999983221110 011133333333333333 379998755 78
Q ss_pred EEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CC
Q 013839 281 CLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG-SS 359 (435)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~ 359 (435)
.+++ + +++ ++++-+........++-..+..++++...-. +....++ .-.++...+.++++..+ ++
T Consensus 233 SViV-G-~k~----FI~kA~~~RKalGGGmRQsGvLaaaaLval~-------~~~~~L~-~dHk~A~~lAe~~~~~~~i~ 298 (384)
T KOG1368|consen 233 SVIV-G-SKD----FIDKARHFRKALGGGMRQSGVLAAAALVALD-------ENVPLLR-ADHKRAKELAEYINTPEEIR 298 (384)
T ss_pred cEEE-c-cHH----HHHHHHHHHHHhcCchhHHHHHHHHHHHHhh-------cchHHHH-HHHHHHHHHHHHhcccccee
Confidence 8874 4 888 8887777666666666666666665544321 2222222 22334445566666554 21
Q ss_pred CCccccccCcceeEe-----cCCCHHHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHHHHHHHH
Q 013839 360 LNWEHITNQLGMFCF-----SGLTPYQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 360 ~~~~~~~~~~g~~~~-----~~~~~~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~l 420 (435)
+.+...+.. +.. .+++.+.+.+.+++.||.+.++. ||.+- ..++++++.....+.+.+
T Consensus 299 --v~v~a~etN-iv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 299 --VEVPAVETN-IVNMVLCQARLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred --eecchhhcc-eeeeecccccCCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 223323444 444 36677777666688999999874 77763 348899999999885443
No 251
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=8.6e-16 Score=151.95 Aligned_cols=344 Identities=11% Similarity=0.031 Sum_probs=195.9
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..||+..|.-...-| ...+++++++.+++... .+ +.......+.+..+++.+....... ..+.+. ++++|
T Consensus 53 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~-~~-~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~--f~~sG 126 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSVG-NSAPRVVEAVREQVARF-TH-TCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSA--LFNSG 126 (443)
T ss_pred CCCCEEEEcCcchhhhccC-CCCHHHHHHHHHHHHhc-cC-ccccccCCHHHHHHHHHHHHhCCCC-CCCEEE--EeCCc
Confidence 3567888887774211111 12234444444454322 11 1111122344455555552221100 013566 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhC-C--------C-----CeeeeeecCCCC----CCcC-------
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDA-Q--------I-----PERTYHYYDPDS----KSLD------- 181 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g--------~-----~~~~v~~~~~~~----~~~d------- 181 (435)
++|++.+..+.......++|+...++|.+........ + . .+..++.....+ ...+
T Consensus 127 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (443)
T PRK06058 127 AEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAAR 206 (443)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHH
Confidence 9999999766555544588999999998876433211 1 0 111122100100 0011
Q ss_pred -hHhHHHHhhcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcC
Q 013839 182 -FAALMDDIKNAPDSSFFLLHPSAHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDE 259 (435)
Q Consensus 182 -~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 259 (435)
++.+++.+. +++..++++...+.-.|.. .+++.+++|.++|++||+++|.||++.+|+..+ ..+....+ +..
T Consensus 207 ~~~~l~~~~~--~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG---~~fa~~~~-gv~ 280 (443)
T PRK06058 207 AITVIEKQVG--ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTG---AWFACEHE-GIV 280 (443)
T ss_pred HHHHHHHhhC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCh---hhhHHHhc-CCC
Confidence 122223222 2456666654433334555 368889999999999999999999999887543 12222222 222
Q ss_pred CeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 013839 260 HLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMA 339 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~ 339 (435)
.+++ +++|.++ .|+++|++++ +++ +.+.+.......+.+.+++++.++.+.|+.-. + +...
T Consensus 281 PDiv---~~gK~l~-~G~Pi~av~~---~~~----i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~------~--~~l~ 341 (443)
T PRK06058 281 PDLI---TTAKGIA-GGLPLSAVTG---RAE----IMDAPHPGGLGGTYGGNPVACAAALAAIETIE------E--DDLV 341 (443)
T ss_pred CCEE---EEccccc-CCCccEEEEE---cHH----HHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH------H--cCHH
Confidence 2233 3589999 8999999974 777 77766544445667788888888888875321 1 2445
Q ss_pred HHHHHHHHHHHHHHHhhCCC-CCccccccCcceeEec--CC-----CHH---HH-HHHhhhccEEEeCCC------cEEe
Q 013839 340 DRIQRKRTTLRQNLEKLGSS-LNWEHITNQLGMFCFS--GL-----TPY---QV-DRLAKEFHIYMTQDG------RISM 401 (435)
Q Consensus 340 ~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~--~~-----~~~---~~-~~ll~~~gI~i~pgg------Ris~ 401 (435)
++.+++.+++.+.|+++... ..+....+.|.++.+. .- +.+ .+ ..+ .++||.+.+++ ||..
T Consensus 342 ~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~~~~~~~~~~~lr~~P 420 (443)
T PRK06058 342 ARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAA-HAAGVIVLTCGTYGNVIRLLP 420 (443)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHH-HHCCeEEeccCCCCCEEEEEC
Confidence 66666677777777664210 0122245566655442 11 112 23 333 46899998753 6753
Q ss_pred c-cCCCCcHHHHHHHHHHHHHh
Q 013839 402 A-GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 402 ~-~~~~e~i~~~~~~l~~~l~~ 422 (435)
. ..+++++++++++|.+++++
T Consensus 421 pl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 421 PLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred CCccCHHHHHHHHHHHHHHHHh
Confidence 2 34899999999999998865
No 252
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=2.2e-15 Score=147.98 Aligned_cols=155 Identities=18% Similarity=0.123 Sum_probs=119.3
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH----HHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN----IWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 169 (435)
...|.+.++++..+. . ++.+++|++|+.++ +.+++.+||+|+++.++|.+... .+...|++++.
T Consensus 65 ~~~le~~lA~l~g~~--------~--al~~~SG~~Ai~~a--l~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (427)
T PRK05994 65 NAVLEERVAALEGGT--------A--ALAVASGHAAQFLV--FHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRW 132 (427)
T ss_pred HHHHHHHHHHHhCCC--------c--EEEEcCHHHHHHHH--HHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEE
Confidence 457888888887332 2 33689999999888 77778999999999999986543 35678888887
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .|+++++++++ ++++++++++|+||||.+.+ +++|.++|++|++++|+|+++...... .
T Consensus 133 vd~-------~d~~~l~~ai~---~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~----~- 194 (427)
T PRK05994 133 ADA-------DDPASFERAIT---PRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLI----R- 194 (427)
T ss_pred ECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccC----C-
Confidence 754 27889999887 67899999999999999886 569999999999999999997532111 0
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
++ + ..-++++.|++|.+|-+|-.+|.+++
T Consensus 195 -pl----~-~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 195 -PI----E-HGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred -cc----c-cCCcEEEEcCccccCCCCCcEEEEEE
Confidence 11 1 23468899999999877777777653
No 253
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.74 E-value=2.4e-15 Score=147.61 Aligned_cols=337 Identities=15% Similarity=0.088 Sum_probs=189.1
Q ss_pred chhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHh-cCCCCC------CCCCCcccHHHHH----HHHHh
Q 013839 36 PINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKI-AGSEFL------ESISASVSTKMVE----ESVKL 104 (435)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~Y~~~~g~~~lr~----~ia~~ 104 (435)
.+++++++-.. ..++.++|-.++ | . ..+.++++.... ...... .|.......+|.+ .++++
T Consensus 15 ~~~~~~~~~~~-~~~~~~~l~~se----n--~-~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l 86 (416)
T PRK13034 15 EVFAAINKELE-RQQDHLELIASE----N--F-TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQL 86 (416)
T ss_pred HHHHHHHHHHH-HHhcCeeecccc----c--C-CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHH
Confidence 35566554432 235777777766 2 1 233333333332 211111 1111223445555 66666
Q ss_pred HcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhh-HHHHhh--CCCCe--eeeeecCCCCCC
Q 013839 105 VYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNH-HNIWRD--AQIPE--RTYHYYDPDSKS 179 (435)
Q Consensus 105 l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~-~~~~~~--~g~~~--~~v~~~~~~~~~ 179 (435)
+ +.. ... +.+++|+.|+..+ +.+++.|||+|+++..+|.+. ...++. .+... +.++. +..++.
T Consensus 87 ~-g~~-------~al-v~~~SG~~A~~~~--l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~ 154 (416)
T PRK13034 87 F-GCD-------YAN-VQPHSGSQANGAV--YLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGV-DRLTGL 154 (416)
T ss_pred h-CCC-------ceE-EecCCcHHHHHHH--HHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccc-ccccCC
Confidence 6 332 221 1468999999888 788899999999999888652 111111 11111 23333 234567
Q ss_pred cChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcC
Q 013839 180 LDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDE 259 (435)
Q Consensus 180 ~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 259 (435)
+|++++++.+.. .++++|++..+.+ |... ++.+|.++|++||+++|+|+++........ . ......
T Consensus 155 ~d~~~le~~l~~--~~~klVi~~~~~~--g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~g------~-~~~~~~ 220 (416)
T PRK13034 155 IDYDEVEELAKE--HKPKLIIAGFSAY--PREL---DFARFREIADEVGALLMVDMAHIAGLVAAG------E-HPNPFP 220 (416)
T ss_pred cCHHHHHHHHhh--cCCeEEEECCCcc--cccc---CHHHHHHHHHHcCCEEEEeCcccccCcccC------C-CCCCCC
Confidence 999999998863 3467887755443 4443 566888899999999999999544332210 0 001112
Q ss_pred CeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc-ccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 013839 260 HLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM-YGSPPVHGILLVATILSDPNLKSLWIDEVKIM 338 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~ 338 (435)
.-+++++|++|.++.+. .|+++ +.+++ +...++...... ..++......++...+... ......++
T Consensus 221 ~~Di~~~s~~K~l~g~~--GG~v~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~-----~~~~~~~~ 287 (416)
T PRK13034 221 HAHVVTTTTHKTLRGPR--GGMIL--TNDEE----IAKKINSAVFPGLQGGPLMHVIAAKAVAFGEA-----LQPEFKTY 287 (416)
T ss_pred CceEEEEeCcccCCCCC--CeEEE--ECcHH----HHHHHHhhcCCcccCCccHHHHHHHHHHHHHH-----hChhHHHH
Confidence 35688999999994232 26654 43444 444444322211 1122222222222222111 11123456
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCccccc--cCcceeE-ecC---CCHHHHHHHhhhccEEEeC----------C---C-c
Q 013839 339 ADRIQRKRTTLRQNLEKLGSSLNWEHIT--NQLGMFC-FSG---LTPYQVDRLAKEFHIYMTQ----------D---G-R 398 (435)
Q Consensus 339 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~g~~~-~~~---~~~~~~~~ll~~~gI~i~p----------g---g-R 398 (435)
++++.++.++|++.|++.|+ .... ++..... .++ .+...+.+.|+++||.+.+ . + |
T Consensus 288 ~~~l~~~a~~l~~~L~~~G~----~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR 363 (416)
T PRK13034 288 AKQVIANAQALAEVLKERGY----DLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIR 363 (416)
T ss_pred HHHHHHHHHHHHHHHHHcCC----EeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeE
Confidence 78899999999999988874 3322 2222211 122 2455665666788999964 1 2 8
Q ss_pred EEec-----cCCCCcHHHHHHHHHHHHHhh
Q 013839 399 ISMA-----GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 399 is~~-----~~~~e~i~~~~~~l~~~l~~~ 423 (435)
++.. +.++++++++.+.|++++...
T Consensus 364 ~~~~~~t~~~~~~~di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 364 IGTPAGTTRGFGEAEFREIANWILDVLDDL 393 (416)
T ss_pred eCcHHHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 7742 346899999999999988743
No 254
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=2.3e-15 Score=141.90 Aligned_cols=302 Identities=15% Similarity=0.094 Sum_probs=182.2
Q ss_pred HHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCC
Q 013839 73 VREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPT 152 (435)
Q Consensus 73 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~ 152 (435)
.+.+.+.+..+.... ++ -..++.+++++++...+ ++.+++||.|+++++..++ +.|||+|++++-+
T Consensus 18 ~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~G~k~----------ava~~sgT~AL~laL~al~-ig~GDeVI~ps~T 83 (374)
T COG0399 18 LAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYLGVKY----------AVAVSSGTAALHLALLALA-IGPGDEVIVPSFT 83 (374)
T ss_pred HHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHhCCCe----------EEEecChHHHHHHHHHhcC-CCCCCEEEecCCc
Confidence 333444444553332 33 24689999999984442 3369999999999843334 7899999999999
Q ss_pred ChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceee
Q 013839 153 WSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPF 232 (435)
Q Consensus 153 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi 232 (435)
|....+.+...|++++++++ |++++.+|++.++++|+ +++++|+..+ =-|. ..++++|.++|++||++||
T Consensus 84 fvATan~i~~~Ga~PVFvDi-d~~T~nid~~~ie~aIt---~~tKAIipVh---l~G~---~~dm~~i~~la~~~~l~vI 153 (374)
T COG0399 84 FVATANAVLLVGAKPVFVDI-DPDTLNIDPDLIEAAIT---PRTKAIIPVH---LAGQ---PCDMDAIMALAKRHGLPVI 153 (374)
T ss_pred hHHHHHHHHHcCCeEEEEec-CCcccCCCHHHHHHHcc---cCCeEEEEeh---hccC---CCCHHHHHHHHHHcCCeEE
Confidence 99999999999999999999 67889999999999999 6788888543 2333 3367899999999999999
Q ss_pred eeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecc--cccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccc---
Q 013839 233 FDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSY--AKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMY--- 307 (435)
Q Consensus 233 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~--- 307 (435)
+|.+........ ...+ ...+ .+.+.|| .|.++ +| -.|.++ +++++ +.++++.+.....
T Consensus 154 EDaAqa~Ga~y~----gk~v---Gt~G--d~~~fSF~~~K~it-tg-EGGav~--tnd~e----la~k~~~lr~hG~~~~ 216 (374)
T COG0399 154 EDAAQAHGATYK----GKKV---GSFG--DIGAFSFHATKNLT-TG-EGGAVV--TNDEE----LAEKARSLRNHGLSRD 216 (374)
T ss_pred EEcchhccCeec----Cccc---cccc--ceEEEEecCCCCcc-cc-CceEEE--eCCHH----HHHHHHHHHHhCcCCC
Confidence 999953322211 0111 1112 3444454 69988 55 335553 76777 5555554432111
Q ss_pred ---------cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc--CcceeEec-
Q 013839 308 ---------GSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN--QLGMFCFS- 375 (435)
Q Consensus 308 ---------~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~g~~~~~- 375 (435)
.+.+.-.-. +.+++...+| +.+++..++=++..+...+.|+++.. ..+..... ...++.+.
T Consensus 217 ~~~~y~~~~~G~N~rm~~-iqAAigl~QL-----~~l~~~~~~R~~~a~~Y~~~l~~~~~-~~~p~~~~~~~~~~~~~~i 289 (374)
T COG0399 217 AVFKYLHEELGYNYRLTE-IQAAIGLAQL-----ERLDEINERRREIAQIYAEALKGLPG-ITLPPEPDGAVHAWHLYTI 289 (374)
T ss_pred ccccceeeecccccCHHH-HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCCceeeeeeeEE
Confidence 111111111 1122222221 33344444444444555666666531 00111111 12233333
Q ss_pred -----CCCHHHHHHHhhhccEE----EeCC--------------C----------cE-E---eccCCCCcHHHHHHHHHH
Q 013839 376 -----GLTPYQVDRLAKEFHIY----MTQD--------------G----------RI-S---MAGVTTGNVNYLANAIHE 418 (435)
Q Consensus 376 -----~~~~~~~~~ll~~~gI~----i~pg--------------g----------Ri-s---~~~~~~e~i~~~~~~l~~ 418 (435)
+.+.+.+...|++.||. ..|- + |. + +..++++++++.++.|++
T Consensus 290 ~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~ 369 (374)
T COG0399 290 LVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKE 369 (374)
T ss_pred EecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 13556676666778554 3441 1 32 2 235688999999999998
Q ss_pred HHHh
Q 013839 419 VTRS 422 (435)
Q Consensus 419 ~l~~ 422 (435)
++.+
T Consensus 370 ~~~~ 373 (374)
T COG0399 370 VLGS 373 (374)
T ss_pred Hhcc
Confidence 8753
No 255
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.74 E-value=2.1e-15 Score=148.31 Aligned_cols=276 Identities=14% Similarity=0.089 Sum_probs=170.9
Q ss_pred CCCeeeEecCCchhHHHHHHHHHHHhCCC---CEEEEcCCCChhhHH----HHhhCCCCe----eeeeecCCCCCCcChH
Q 013839 115 EGRSAGVQALSGTGACRLFAEFQRRFHPE---SHIYFPDPTWSNHHN----IWRDAQIPE----RTYHYYDPDSKSLDFA 183 (435)
Q Consensus 115 ~~~v~~~~t~gg~~a~~~~~~~~~~~~~g---d~Vlv~~p~y~~~~~----~~~~~g~~~----~~v~~~~~~~~~~d~e 183 (435)
+++|+ ++.|++++++++ +..++.+| +.|++....|+.... .++..|+++ +.++. .+++.+|++
T Consensus 86 ~~~v~--~~~~~t~~l~~~--~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~ 159 (406)
T TIGR01814 86 EDEVV--VMNTLTINLHLL--LASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLE 159 (406)
T ss_pred CCcEE--EeCCchHHHHHH--HHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHH
Confidence 67888 999999999988 55556664 368888888876322 345668876 34443 334678999
Q ss_pred hHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 184 ALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 184 ~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
++++.+....++++++++++++|.||..++ +++|.++|+++|+++++|++. .++..+. .+ ...+-++
T Consensus 160 ~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq-~~G~~~i-----d~----~~~gvD~ 226 (406)
T TIGR01814 160 DILDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAH-AVGNVPL-----DL----HDWGVDF 226 (406)
T ss_pred HHHHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEccc-ccCCccc-----cc----ccCCCCE
Confidence 999888644367899999999999999986 558999999999999999994 4432211 11 1224578
Q ss_pred EEecccccc-cccCCcccEEEEEecChhHHHHHHHHHHH---H----------------hhccccCCChhHHHHHHHHhC
Q 013839 264 CAQSYAKSM-GLYGHRVGCLSILCVDSKQAAAIRSQIQQ---I----------------ARAMYGSPPVHGILLVATILS 323 (435)
Q Consensus 264 ~~~s~SK~~-g~~G~RvG~~~~~~~~~~~~~~~~~~l~~---~----------------~~~~~~~~~~~~q~~~~~~l~ 323 (435)
++.|..|.+ |.|| |.+.+ . .+. ...+...+.. . .+....+++..+..++.++++
T Consensus 227 ~~~s~hK~l~g~pG---~~l~v-~-~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~ 300 (406)
T TIGR01814 227 ACWCTYKYLNAGPG---AGAFV-H-EKH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLD 300 (406)
T ss_pred EEEcCccccCCCCC---eEEEE-e-hhh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHH
Confidence 899999986 3455 33321 2 322 1111000000 0 000112345555555555554
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCCcccccc-----CcceeEe-cCCCHHHHHHHhhhccEEEeCC
Q 013839 324 DPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL-GSSLNWEHITN-----QLGMFCF-SGLTPYQVDRLAKEFHIYMTQD 396 (435)
Q Consensus 324 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~-----~~g~~~~-~~~~~~~~~~ll~~~gI~i~pg 396 (435)
.-. +...++.+++..+..+++++.|+++ +...++.+..+ .+++..+ +..+.+.+.+.|.++||.+...
T Consensus 301 ~~~-----~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~ 375 (406)
T TIGR01814 301 IFD-----QAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDKR 375 (406)
T ss_pred HHH-----hcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEecc
Confidence 211 1235677788888888888888764 20111333322 1233322 1234555544456789988753
Q ss_pred --C--cEEec--cCCCCcHHHHHHHHHHHH
Q 013839 397 --G--RISMA--GVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 397 --g--Ris~~--~~~~e~i~~~~~~l~~~l 420 (435)
+ |+|++ ..+++++++++++|++++
T Consensus 376 ~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 376 EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 2 99973 338899999999998764
No 256
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=4.4e-16 Score=151.39 Aligned_cols=326 Identities=15% Similarity=0.121 Sum_probs=196.8
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCC-CC------CCCCCCccc---HHHHHHHHHhHcCCCCccccCCCee
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS-EF------LESISASVS---TKMVEESVKLVYGKDSDVVKEGRSA 119 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~Y~~~~g~---~~lr~~ia~~l~~~~~~~~~~~~v~ 119 (435)
.+.|+|=.++ | ..++.+.+++.....+ .. ..|...... ..+....++.+++.... +|
T Consensus 49 ~~~l~LiasE----N---~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~a-----nv- 115 (493)
T PRK13580 49 RSSLKLIASE----N---YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHA-----YV- 115 (493)
T ss_pred hcCceEeccc----c---cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcc-----cc-
Confidence 5778887776 2 3455555555544421 11 223333333 34444445555665432 34
Q ss_pred eEecCCchhHHHHHHHHHHHhCC-------------------------------CCEEEEcCCCChhhHHH-----HhhC
Q 013839 120 GVQALSGTGACRLFAEFQRRFHP-------------------------------ESHIYFPDPTWSNHHNI-----WRDA 163 (435)
Q Consensus 120 ~~~t~gg~~a~~~~~~~~~~~~~-------------------------------gd~Vlv~~p~y~~~~~~-----~~~~ 163 (435)
...+|+.|+..+ +.+++.| ||+|+..++..+++... +...
T Consensus 116 --qp~Sg~~An~~v--~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~ 191 (493)
T PRK13580 116 --QPHSGADANLVA--FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGK 191 (493)
T ss_pred --cCCCcHHHHHHH--HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhh
Confidence 478899998888 7777766 89999888766555221 1111
Q ss_pred CCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCC
Q 013839 164 QIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASG 243 (435)
Q Consensus 164 g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~ 243 (435)
..+.+.+++ +++++.+|++++++.+. +.+..++++..+|=++ .. ++++|.++|+++|+++++|+++.....+
T Consensus 192 ~~~~~~y~v-d~~~g~iD~d~l~~~~~---~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Glig 263 (493)
T PRK13580 192 MFHQRSYGV-DPDTGLLDYDEIAALAR---EFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVA 263 (493)
T ss_pred eeeeEeccc-CcccCccCHHHHHHHHh---hcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceec
Confidence 245666776 35567899999999998 4455555556555544 43 4678999999999999999996443332
Q ss_pred CCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhC
Q 013839 244 DLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILS 323 (435)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 323 (435)
+ + ... .......+..++++|++|++. |.+.|++. + +++ +++.+.+.....+.++......+++.++.
T Consensus 264 g-~--~~~-~~~~~~~~~D~vtgT~hKaL~--GP~GG~I~--~-~~~----l~~~L~~a~P~i~gg~l~p~iAA~avAl~ 330 (493)
T PRK13580 264 G-K--VFT-GDEDPVPHADIVTTTTHKTLR--GPRGGLVL--A-KKE----YADAVDKGCPLVLGGPLPHVMAAKAVALA 330 (493)
T ss_pred c-c--cch-hhcCCCCCCcEEEeCChhhcc--CCCeEEEE--e-cHH----HHHHHhhCCCcccCCCccHHHHHHHHHHH
Confidence 1 1 100 000011245688999999982 33347775 3 777 77666543333444444444333333332
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc--cCcceeEecCC-----CHHHHHHHhhhccEEEeCC
Q 013839 324 DPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT--NQLGMFCFSGL-----TPYQVDRLAKEFHIYMTQD 396 (435)
Q Consensus 324 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~g~~~~~~~-----~~~~~~~ll~~~gI~i~pg 396 (435)
.- .....+.+++++.++.+.|.+.|.+.|+ .+.. .... .+++.+ +...+.+.|.+.||.+.+.
T Consensus 331 e~-----~~~ef~~y~~~l~~Na~~La~~L~~~G~----~vv~ggTdsh-IV~V~lg~~~~~g~~a~~~L~e~GI~vn~i 400 (493)
T PRK13580 331 EA-----RTPEFQKYAQQVVDNARALAEGFLKRGA----RLVTGGTDNH-LVLIDVTSFGLTGRQAESALLDAGIVTNRN 400 (493)
T ss_pred HH-----hCccHHHHHHHHHHHHHHHHHHHHhcCC----CccCCCCCCC-EEEEEeCCHHHHHHHHHHHHHHCCeEEccc
Confidence 11 0011256788999999999999999985 3321 2222 333333 2335666778899999631
Q ss_pred -------------C-cEEecc-----CCCCcHHHHHHHHHHHHHhh
Q 013839 397 -------------G-RISMAG-----VTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 397 -------------g-Ris~~~-----~~~e~i~~~~~~l~~~l~~~ 423 (435)
| ||+... .++++++++.+.|.++++..
T Consensus 401 ~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 401 SIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred cCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 2 777532 35789999999999888643
No 257
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.73 E-value=3.3e-15 Score=143.52 Aligned_cols=212 Identities=15% Similarity=0.128 Sum_probs=145.3
Q ss_pred HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh----hCCCCeeee
Q 013839 95 TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR----DAQIPERTY 170 (435)
Q Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v 170 (435)
..+.+.+++.-.+. ... ++++|..|+..+ +++++.+||+|+++...|.+....++ ..|.++..+
T Consensus 58 ~~le~~la~Le~g~--------~a~--~~~SGmaAi~~~--l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~ 125 (386)
T PF01053_consen 58 RALEQRLAALEGGE--------DAL--LFSSGMAAISAA--LLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFV 125 (386)
T ss_dssp HHHHHHHHHHHT-S--------EEE--EESSHHHHHHHH--HHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEE
T ss_pred HHHHHHHHHhhccc--------cee--eccchHHHHHHH--HHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEe
Confidence 45666666665332 333 789999999888 88899999999999999988876665 467777666
Q ss_pred eecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-ceeeeeccCCCccCCCCcccH
Q 013839 171 HYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKG-HFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 171 ~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~-~~vi~Deay~~~~~~~~~~~~ 249 (435)
+. -|+++++++++ +++++|++.+|.||+..+ .++++|+++|+++| +++|+|+.+.....-.
T Consensus 126 d~-------~d~~~l~~~l~---~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~----- 187 (386)
T PF01053_consen 126 DP-------TDLEALEAALR---PNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPYNQN----- 187 (386)
T ss_dssp ST-------TSHHHHHHHHC---TTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC------
T ss_pred Cc-------hhHHHHHhhcc---ccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeeccccceeeec-----
Confidence 32 38899999998 789999999999999554 56779999999998 9999999975432211
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecC-hhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVD-SKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
++ . ..-+|++.|.+|.++-.|--+|-+++ +++ ++ +.+.++.........+++...+.+..-|++
T Consensus 188 -pL----~-~GaDivv~S~TKyl~Ghsdv~~G~vv-~~~~~~----~~~~l~~~~~~~G~~~~p~da~ll~rgl~T---- 252 (386)
T PF01053_consen 188 -PL----E-LGADIVVHSATKYLSGHSDVMGGAVV-VNGSSE----LYDRLREFRRLLGATLSPFDAWLLLRGLRT---- 252 (386)
T ss_dssp -GG----G-GT-SEEEEETTTTTTTSSSE-EEEEE-ESSHHH----HHHHHHHHHHHHT-B--HHHHHHHHHHHTT----
T ss_pred -cC----c-CCceEEEeeccccccCCcceeeEEEE-ECchhh----hhhhhcchhhhcCccchHHHHHHHhcCCCc----
Confidence 11 1 13578899999998645544444442 434 45 666666555555555666655555555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+....++..++...+.+.|++++
T Consensus 253 ------l~~R~~~~~~nA~~lA~~L~~hp 275 (386)
T PF01053_consen 253 ------LPLRMERQNENAEALAEFLEEHP 275 (386)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHTST
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 34556677778888899998875
No 258
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.73 E-value=6.5e-15 Score=141.25 Aligned_cols=312 Identities=15% Similarity=0.143 Sum_probs=196.8
Q ss_pred hHHHHH-HHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEc
Q 013839 71 QCVREA-EAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFP 149 (435)
Q Consensus 71 ~~~~~~-~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~ 149 (435)
..+.+. ...+..++. .|..+.....|.+++++++ |.. .++ .+++|+.|++++ +...++|||.| +
T Consensus 50 ~aMs~~q~a~~~~GDe-~yag~~s~~~lE~~va~~~-G~~-------~av--~v~sGT~Al~ll--~~l~l~pGDeV--p 114 (450)
T TIGR02618 50 NAMSDKQWAGLMMGDE-AYAGSRNFYHLERTVRELY-GFK-------YVV--PTHQGRGAENLL--SQIAIKPGDYV--P 114 (450)
T ss_pred HHHHHHHHHHhhhcch-hhcCCCcHHHHHHHHHHHH-CCC-------eEE--EcCCHHHHHHHH--HHhCCCCcCEE--C
Confidence 455555 445544533 4888888889999999998 432 344 799999998876 55568899987 7
Q ss_pred CCCChhhHH-HHhhCCCCeeeeeec--------CCCCCCcChHhHHHHhhcC-CCCcEEEEeCCCCCC-CCCCCCHHHHH
Q 013839 150 DPTWSNHHN-IWRDAQIPERTYHYY--------DPDSKSLDFAALMDDIKNA-PDSSFFLLHPSAHNP-TGVDPTEEQWR 218 (435)
Q Consensus 150 ~p~y~~~~~-~~~~~g~~~~~v~~~--------~~~~~~~d~e~l~~~i~~~-~~~~~~v~~~~p~NP-tG~~~~~~~l~ 218 (435)
+++|..... .++..|+..+.++.. ++.++.+|++.+++.+++. ..++.++.+.+++|- .|..++.++++
T Consensus 115 sn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~ 194 (450)
T TIGR02618 115 GNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMR 194 (450)
T ss_pred CceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHH
Confidence 787744444 478889876666442 1345789999999999843 224456777777885 58999999999
Q ss_pred HHHHHHHhcCceeeeeccCCC-cc---------CCCCcccHHHH-HHhhhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 219 EISYQFKVKGHFPFFDMAYQG-FA---------SGDLDKDAQAI-RIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 219 ~i~~~~~~~~~~vi~Deay~~-~~---------~~~~~~~~~~~-~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
++.++|++||+.+|+|.+... .. +.+ .+.+.+ +..... -+.+..|..|.++.+ +|.++ +.+
T Consensus 195 ~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~--~~i~ei~~e~~~~--aD~~~~S~~Kd~~~~---~GG~l-~~~ 266 (450)
T TIGR02618 195 EVRELCEAHGIKVFYDATRCVENAYFIKEREQGYED--KSIAEILKEMMSY--ADGCTMSGKKDCLVN---IGGFL-CMN 266 (450)
T ss_pred HHHHHHHHcCCEEEEEccchhhChhhhhcccccccC--CCHHHHHHHHhcc--CcEEEEeeccCCCCC---CceEE-EeC
Confidence 999999999999999999532 11 111 112111 222222 234788899997655 34443 246
Q ss_pred ChhHHHHHHHHHHHHhhcc-----ccCCChhHHHHHHHHhCChhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCC
Q 013839 288 DSKQAAAIRSQIQQIARAM-----YGSPPVHGILLVATILSDPNLKSLWIDEVK-IMADRIQRKRTTLRQNLEKLGSSLN 361 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~-----~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~ 361 (435)
+++ ++++.+...... ..+.+.-...+++..|.+ .+. .+.+.-....++|.+.|.+.|.|
T Consensus 267 d~~----l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e---------~~~~~y~~~r~~~a~~La~~L~~~Gvp-- 331 (450)
T TIGR02618 267 DDE----MFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIRE---------AVDYEYIEHRVKQVRYLGDKLKAAGVP-- 331 (450)
T ss_pred CHH----HHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHH---------hhhHHHHHHHHHHHHHHHHHHHHCCCc--
Confidence 888 776666653221 112222222333333332 111 11112222457788899888854
Q ss_pred ccccccCcceeEecCC------------C-HHHHHHHhhhccEEEeCCC---------------------cEEecc--CC
Q 013839 362 WEHITNQLGMFCFSGL------------T-PYQVDRLAKEFHIYMTQDG---------------------RISMAG--VT 405 (435)
Q Consensus 362 ~~~~~~~~g~~~~~~~------------~-~~~~~~ll~~~gI~i~pgg---------------------Ris~~~--~~ 405 (435)
+..|.+|--++++. . ..++..|..+.||-...-| |+.+.. .|
T Consensus 332 --v~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt 409 (450)
T TIGR02618 332 --IVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYT 409 (450)
T ss_pred --ccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecccccccc
Confidence 45566665555532 1 2345666667888765321 777643 27
Q ss_pred CCcHHHHHHHHHHHHHh
Q 013839 406 TGNVNYLANAIHEVTRS 422 (435)
Q Consensus 406 ~e~i~~~~~~l~~~l~~ 422 (435)
.+.+++..++|..+.++
T Consensus 410 ~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 410 YAHMDVVADGIIKLYKH 426 (450)
T ss_pred HhHHHHHHHHHHHHHhh
Confidence 78899999999988764
No 259
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=6.5e-15 Score=144.26 Aligned_cols=156 Identities=14% Similarity=0.048 Sum_probs=116.3
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH----HhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI----WRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~ 169 (435)
...|.+.++++..+. . ++++++|+.|+.++ +.+++.+||+|+++...|.+.... +...|++++.
T Consensus 71 ~~~Le~~lA~l~g~~--------~--av~~sSG~aAi~~a--l~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~ 138 (436)
T PRK07812 71 QDVVEQRIAALEGGV--------A--ALLLASGQAAETFA--ILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSF 138 (436)
T ss_pred HHHHHHHHHHHhCCC--------e--EEEEccHHHHHHHH--HHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEE
Confidence 457888888876332 2 33689999998888 777889999999999888776543 3446776666
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++ +. .|++.++++++ +++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|+++..-...
T Consensus 139 vd--d~----~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~~------ 200 (436)
T PRK07812 139 VE--DP----DDLDAWRAAVR---PNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYLI------ 200 (436)
T ss_pred EC--CC----CCHHHHHHhCC---CCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 63 12 28899999887 67899999999999999876 458999999999999999985431111
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
.++ . ..-.+++.|++|.+|..|--+|++++
T Consensus 201 ~pl----~-~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 201 RPL----E-HGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred Cch----h-cCCCEEEEecccccCCCCCeEEEEEE
Confidence 011 1 23457789999999878777888764
No 260
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=7.8e-15 Score=143.84 Aligned_cols=155 Identities=17% Similarity=0.119 Sum_probs=121.1
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHH----hhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIW----RDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~ 169 (435)
..+|++.++++..+. . ++++++|++|+.++ +.+++.+||+|+++...|......+ ...|++++.
T Consensus 66 ~~~le~~lA~l~g~~--------~--av~~sSGt~Al~~a--l~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~ 133 (433)
T PRK08134 66 VAVLEERVAALEGGV--------G--AIATASGQAALHLA--IATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTF 133 (433)
T ss_pred HHHHHHHHHHHhCCC--------c--EEEeCCHHHHHHHH--HHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEE
Confidence 568888999887433 2 23799999999988 6667889999999999998665543 457888888
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. + |+++++++++ +++++|++.+|+||||.+.+ +++|+++|+++|+++|+|.++..-... .
T Consensus 134 vd~---~----d~~~l~~~i~---~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~----~- 195 (433)
T PRK08134 134 VKP---G----DIDGWRAAIR---PNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLL----R- 195 (433)
T ss_pred ECC---C----CHHHHHHhcC---CCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----C-
Confidence 865 1 7899999998 78999999999999999876 569999999999999999996432211 0
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
++ ...-++++.|.+|.++-+|..+|.+++
T Consensus 196 -pl-----~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 196 -PF-----EHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred -ch-----hcCCCEEEeccccccCCCCCceEEEEE
Confidence 11 124578899999999888887877753
No 261
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.71 E-value=7.1e-15 Score=134.37 Aligned_cols=312 Identities=14% Similarity=0.049 Sum_probs=190.5
Q ss_pred cccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEE
Q 013839 67 PVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHI 146 (435)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~V 146 (435)
..|.+.+.+++.+.......-|+...-...+.+.+++.+ ++ ..+. ++.+||+|+.++ +.+.++||+.|
T Consensus 10 ~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~-g~-------~a~~--Fv~sGT~aN~la--l~~~~~~~~~v 77 (342)
T COG2008 10 AGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELF-GK-------EAAL--FVPSGTQANQLA--LAAHCQPGESV 77 (342)
T ss_pred CCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHh-CC-------ceEE--EecCccHHHHHH--HHHhcCCCCeE
Confidence 455666777666665233445777666666666666665 33 1344 899999999998 88889999999
Q ss_pred EEcCCCChhhHH--HHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 013839 147 YFPDPTWSNHHN--IWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAHNPTGVDPTEEQWREIS 221 (435)
Q Consensus 147 lv~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~ 221 (435)
++..-++....+ ..+..+ ...+++..+.+++.+++|++++.+... ...+..+++.+.+|..|+++|.+++++|.
T Consensus 78 i~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~ 156 (342)
T COG2008 78 ICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAIS 156 (342)
T ss_pred EEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHH
Confidence 998866643322 223332 122333323467899999999988732 12344555555566779999999999999
Q ss_pred HHHHhcCceeeeeccC--CCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHH
Q 013839 222 YQFKVKGHFPFFDMAY--QGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQI 299 (435)
Q Consensus 222 ~~~~~~~~~vi~Deay--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l 299 (435)
++|++|++.+..|.+- ......+ ++...+... -+.+..++||..+.++ |.++ ..+.+ +++++
T Consensus 157 ~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~-----~D~v~~~~tK~g~~~~---gAiv--~gn~~----~~~~a 220 (342)
T COG2008 157 AVCKEHGLPLHMDGARLANALVALG--VALKTIKSY-----VDSVSFCLTKGGGAPV---GAIV--FGNRD----FAKRA 220 (342)
T ss_pred HHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhh-----CCEEEEecccCCccee---eeEE--EcCHH----HHHHH
Confidence 9999999999999983 2222221 122222222 3455667999987665 7776 34888 77766
Q ss_pred HHHhhccccCCC--hhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh-CCCCCccccccCcceeEec
Q 013839 300 QQIARAMYGSPP--VHGILLVATILSDPNLKSLWIDEVKIMADRIQ-RKRTTLRQNLEKL-GSSLNWEHITNQLGMFCFS 375 (435)
Q Consensus 300 ~~~~~~~~~~~~--~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~-~~~~~~~~~~~~~g~~~~~ 375 (435)
+..........+ .+.......+|.+. +-...+++. +..+.|.+.++.. |. +...+.....+|+
T Consensus 221 ~~~rK~~Ggl~~k~r~laA~~~~~l~~~---------~~~~~~~Han~mA~~La~~~~~~~G~----~~~~~~~tN~vf~ 287 (342)
T COG2008 221 RRWRKRAGGLMRKARFLAAQGLYALEDD---------VWRLAADHANAMAARLAEGLEAKPGV----KLAFPVETNMVFV 287 (342)
T ss_pred HHHHHHhcccHhhhhHHHHHHHHHHhcc---------HHHHHHHHHHHHHHHHHHhhhhcCCc----eeccCCcccEEEE
Confidence 655443333333 22223333444432 122222222 2366777888744 53 4444333446667
Q ss_pred CCCHHHHHH-----HhhhccEEEeCCC---cEEecc-CCCCcHHHHHHHHHHHH
Q 013839 376 GLTPYQVDR-----LAKEFHIYMTQDG---RISMAG-VTTGNVNYLANAIHEVT 420 (435)
Q Consensus 376 ~~~~~~~~~-----ll~~~gI~i~pgg---Ris~~~-~~~e~i~~~~~~l~~~l 420 (435)
.+....+.. .+...|+.+.+++ |+..+. .+++++++++..+++++
T Consensus 288 ~l~~~~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 288 RLPESAIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ECChHHHHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 665432222 2334567776664 775432 37888998888887764
No 262
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=1.2e-14 Score=140.06 Aligned_cols=210 Identities=10% Similarity=0.003 Sum_probs=146.3
Q ss_pred HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHH----hhCCCCeeee
Q 013839 95 TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIW----RDAQIPERTY 170 (435)
Q Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v 170 (435)
..|.+.+++.-.+. . ++++++|+.|+.++ +++++.+||+|++++..|.+....+ +..|+++..+
T Consensus 65 ~~le~~la~LEg~~--------~--a~~~~SGmaAi~~~--~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v 132 (395)
T PRK08114 65 FSLQEAMCELEGGA--------G--CALYPCGAAAVANA--ILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWF 132 (395)
T ss_pred HHHHHHHHHHhCCC--------e--EEEEhHHHHHHHHH--HHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence 35666666654222 2 33789999999988 7778999999999998987776554 5678888777
Q ss_pred eecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CceeeeeccCCCccCCCCccc
Q 013839 171 HYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVK--GHFPFFDMAYQGFASGDLDKD 248 (435)
Q Consensus 171 ~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~vi~Deay~~~~~~~~~~~ 248 (435)
+. .|.++++++++ +++++|++.+|.||||.+.+ +++|+++|+++ |+++++|.++..-..- +
T Consensus 133 d~-------~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~~----~ 195 (395)
T PRK08114 133 DP-------LIGADIAKLIQ---PNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVLF----K 195 (395)
T ss_pred CC-------CCHHHHHHhcC---CCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccccc----C
Confidence 53 36788999997 67899999999999998875 56999999998 4999999997432211 1
Q ss_pred HHHHHHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhh
Q 013839 249 AQAIRIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNL 327 (435)
Q Consensus 249 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l 327 (435)
+ ....-++++.|.+|.++-+| .-.|.++ . +++ +.+.++..........++...+.+..-|+
T Consensus 196 --p-----l~~GaDivv~S~tKyl~Ghsdv~~G~v~--~-~~~----~~~~l~~~~~~~G~~~~p~~a~l~~rgl~---- 257 (395)
T PRK08114 196 --A-----LDFGIDISIQAGTKYLVGHSDAMIGTAV--A-NAR----CWEQLRENSYLMGQMVDADTAYMTSRGLR---- 257 (395)
T ss_pred --H-----HHcCCcEEEEcCcccccCCCcceeEEEE--c-CHH----HHHHHHHHHHhccCCCCHHHHHHHHcCCC----
Confidence 1 11245799999999876555 4455443 3 666 44545544333444555555444444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 328 KSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
-+.-..++..++...+.+.|+.++
T Consensus 258 ------TL~lR~~~~~~na~~va~~L~~hp 281 (395)
T PRK08114 258 ------TLGVRLRQHEESSLKVAEWLAEHP 281 (395)
T ss_pred ------cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 345566778888888889998775
No 263
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.71 E-value=1.5e-14 Score=143.07 Aligned_cols=343 Identities=10% Similarity=0.051 Sum_probs=190.2
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC-CC-CCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE-FL-ESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.++...+|+..|.....-| ...+++++.+.+++.... .. .+-+.....+|-+.+++...+... ...+. ..++
T Consensus 36 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~----~~~~~-f~~~ 109 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALG-HNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKM----DYKLQ-FPGP 109 (442)
T ss_pred CCCCEEEEccccHhhhcCC-CCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCC----CccEE-EeCC
Confidence 3668899998885312122 223344455555554321 11 111222223344444443311100 11332 1468
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh-CC-------C-----CeeeeeecCCCCCCc--------Ch-
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD-AQ-------I-----PERTYHYYDPDSKSL--------DF- 182 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g-------~-----~~~~v~~~~~~~~~~--------d~- 182 (435)
+|++|++.+..+........+|+....+|.+....... .| . .+..++. ++.... +.
T Consensus 110 sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 110 SGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPY--PHEYRCPFGIGGEAGSN 187 (442)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCC--CccccccccCCchhHHH
Confidence 99999999976665554447899999889877543332 11 0 1222222 111111 11
Q ss_pred ---HhHHHHhh---cCCCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh
Q 013839 183 ---AALMDDIK---NAPDSSFFLLHPSAHNPTG-VDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF 255 (435)
Q Consensus 183 ---e~l~~~i~---~~~~~~~~v~~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~ 255 (435)
+.+++.+. +...+..++++...++..| ...+++.+++|.++|++||+++|.||++.+|+..+ ..+....+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~~~ 264 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG---TMFAFEHA 264 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHHc
Confidence 12333332 1223456666655444445 45799999999999999999999999999997654 23343333
Q ss_pred hhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 013839 256 LEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEV 335 (435)
Q Consensus 256 ~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~ 335 (435)
+....+++ +||.++. |+++|++++ +++ + +.+.......+++.+++++.++.+.|+.-. +
T Consensus 265 -gv~PDiv~---~gK~l~~-G~Pigav~~---~~~----~-~~~~~~~~~~T~~gnpla~aaa~a~L~~i~------~-- 323 (442)
T TIGR00709 265 -GIEPDFVV---MSKAVGG-GLPLAVLLI---APE----F-DAWQPAGHTGTFRGNQLAMVTGTEALNYWK------D-- 323 (442)
T ss_pred -CCCCcEEE---EcccccC-CcccEEEEE---chH----H-hccCCCcCCCCCCcCHHHHHHHHHHHHHHH------h--
Confidence 22222333 7999995 899999974 655 2 222111223566788888888888874311 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC--CCCCccccccCcceeEecCC--C----------------HHHHHHHhhhccEEEeC
Q 013839 336 KIMADRIQRKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGL--T----------------PYQVDRLAKEFHIYMTQ 395 (435)
Q Consensus 336 ~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~--~----------------~~~~~~ll~~~gI~i~p 395 (435)
+...++++++.+++.+.|+++- .+ .+......|.++. +.+ + ...+...+.++||.+.+
T Consensus 324 ~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~~-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~ 401 (442)
T TIGR00709 324 DNLAQNAQERGERITSFLDDMIKEHP-CIGNVRGRGLMQG-IMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLET 401 (442)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEE-EEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEee
Confidence 2344566666677777766541 11 1122333443332 211 0 12333334568999976
Q ss_pred C---C---cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 396 D---G---RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 396 g---g---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
. | |+... ..++++++++++++.+++.+.
T Consensus 402 ~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 402 GGREGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred cCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5 3 66643 348999999999999998765
No 264
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=1.9e-14 Score=142.12 Aligned_cols=346 Identities=14% Similarity=0.078 Sum_probs=194.4
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCC--CCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFL--ESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.++...+|+..|.-...-|. ..+++++++.+++...... .+.......+|-+.+++...+.. .+.+. +++
T Consensus 39 ~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~~v~--f~~ 110 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVGH-APPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDF-----EKRVT--FGL 110 (445)
T ss_pred CCCCEEEECCccHHhhcCCC-CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC-----CCEEE--ECC
Confidence 36678899977642111222 2334444444454422111 11112222344455544431110 13666 899
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCCC-------------CeeeeeecCCCC--CC-cC------
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQI-------------PERTYHYYDPDS--KS-LD------ 181 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~~~--~~-~d------ 181 (435)
+|++|++.+..+........+|+....+|.+...... ..+. .++.+|..+... +. .+
T Consensus 111 SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 190 (445)
T PRK08593 111 SGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEE 190 (445)
T ss_pred chHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHH
Confidence 9999999997655544334678888888877643221 1110 122233211100 00 01
Q ss_pred -hHhHHHHhhcC--CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhh
Q 013839 182 -FAALMDDIKNA--PDSSFFLLHPSAHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE 257 (435)
Q Consensus 182 -~e~l~~~i~~~--~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~ 257 (435)
++.+++.+.+. .++..+|++....+..|.. .+++.+++|.++|++||+++|.||++.+|+..+ ..+....+ +
T Consensus 191 ~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG---~~~a~~~~-g 266 (445)
T PRK08593 191 YLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTG---KWSSISHF-N 266 (445)
T ss_pred HHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hHHHHHhc-C
Confidence 23454444321 2467888888888888887 688889999999999999999999998886543 12222222 2
Q ss_pred cCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 013839 258 DEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKI 337 (435)
Q Consensus 258 ~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~ 337 (435)
.... +-+++|.++ .|+++|++++ +++ +++.+.......+.+.+++++.++.+.|+.-. + +.
T Consensus 267 v~pD---i~t~gK~l~-~G~p~gav~~---~~~----i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~------~--~~ 327 (445)
T PRK08593 267 ITPD---LMSFGKSLA-GGMPMSAIVG---RKE----IMESLEAPAHLFTTGANPVSCAAALATIDMIE------D--ES 327 (445)
T ss_pred CCCC---Eeeeccccc-CCcccEEEEE---cHH----HHhhhccCCCCCCCCCCHHHHHHHHHHHHHHH------h--cc
Confidence 2122 337899998 7899999964 777 76666432223455667777776666664211 1 13
Q ss_pred HHHHHHHHHHHHHHHHHhhC--CCCCccccccCcceeEecCC---------CH---HHHHHHhhhccEEEeCC-C---cE
Q 013839 338 MADRIQRKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGL---------TP---YQVDRLAKEFHIYMTQD-G---RI 399 (435)
Q Consensus 338 ~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~---------~~---~~~~~ll~~~gI~i~pg-g---Ri 399 (435)
..++.+++.+++.+.|+++. .+ .+......|. +.-+.+ +. ..+...+.++||.+.+. + |+
T Consensus 328 l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl-~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~ 405 (445)
T PRK08593 328 LLQRSAEKGEYARKRFDQWVSKYN-FVGDVRGYGL-SIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVLRF 405 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeccce-EEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccCCCEEEE
Confidence 44555555566666665541 11 0112222332 222211 11 22333335689999774 3 77
Q ss_pred Eec-cCCCCcHHHHHHHHHHHHHhhhh
Q 013839 400 SMA-GVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 400 s~~-~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
... ..++++++++++++.++++++..
T Consensus 406 ~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 406 QPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred ECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 653 24899999999999999987553
No 265
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.70 E-value=2.1e-14 Score=139.91 Aligned_cols=337 Identities=15% Similarity=0.092 Sum_probs=196.7
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
++...+|+..|.-...-|.. .+.+++++.+++... ...+. ....+....+++++..... .+++. ++++|+
T Consensus 34 dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~-~~~~~--~~~~~~~~~la~~l~~~~~----~~~v~--f~~SGs 103 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKL-INPSP--AFYNEPMAKLAGLLTQHSC----FDKVF--FANSGA 103 (395)
T ss_pred CCCEEEECCcChhhccCCCC-CHHHHHHHHHHHHhc-ccccc--cccCHHHHHHHHHHhhccC----CCEEE--EeCCcH
Confidence 56789999876421222322 334444444554321 11111 1234566778888743311 24666 899999
Q ss_pred hHHHHHHHHHHHh----CCC-CEEEEcCCCChhhHH-HHhhCCCCe---eeeeecC--CCCCCcChHhHHHHhhcCCCCc
Q 013839 128 GACRLFAEFQRRF----HPE-SHIYFPDPTWSNHHN-IWRDAQIPE---RTYHYYD--PDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 128 ~a~~~~~~~~~~~----~~g-d~Vlv~~p~y~~~~~-~~~~~g~~~---~~v~~~~--~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
+|++.+..+.... .+| .+|+..+.+|.+... .+...|... ...|... ......|++.+++.+. +++
T Consensus 104 eA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~ 180 (395)
T PRK03715 104 EANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT---DKT 180 (395)
T ss_pred HHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC---CCc
Confidence 9999997554433 134 678888888876643 222223211 0111100 0000247888988886 567
Q ss_pred EEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc
Q 013839 197 FFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY 275 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~ 275 (435)
+++++...++..|... +++.+++|.++|++||+++|.||++.+++..+ ..+....+ +... + +.+++|.+| .
T Consensus 181 aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG---~~~a~~~~-gv~P-D--i~t~gK~lg-~ 252 (395)
T PRK03715 181 VAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG---TLFAYELS-GIEP-D--IMTLGKGIG-G 252 (395)
T ss_pred eEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc---chhhHhhc-CCCC-c--eeeehhhhh-C
Confidence 8888887777788875 68889999999999999999999998875543 11222222 2212 2 357899998 6
Q ss_pred CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013839 276 GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEK 355 (435)
Q Consensus 276 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 355 (435)
|..+|.+++ +++ +.. +.......+.+.++++..++.+.|+.- + -+...++.+++.+++.+.|++
T Consensus 253 G~p~~av~~---~~~----i~~-~~~~~~~~T~~g~pl~~aaala~L~~l-------~-~~~l~~~~~~~g~~l~~~L~~ 316 (395)
T PRK03715 253 GVPLAALLA---KAE----VAV-FEAGDQGGTYNGNPLMTAVGVAVISQL-------L-APGFLEGVRARGEYLKEKLLE 316 (395)
T ss_pred CcceEEEEE---ccc----ccc-ccCCCcCCCCCCCHHHHHHHHHHHHHH-------H-hccHHHHHHHHHHHHHHHHHH
Confidence 788888853 666 532 211111234455566655555555321 1 134566677777777777776
Q ss_pred hCCCCCccccccCcceeEecCCC---HHHHHHHhhhc---cEEEeCCC----cEEec-cCCCCcHHHHHHHHHHHHHh
Q 013839 356 LGSSLNWEHITNQLGMFCFSGLT---PYQVDRLAKEF---HIYMTQDG----RISMA-GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~ll~~~---gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~l~~ 422 (435)
+.....+...... |.+.-+.+. ...+...+.+. ||.+.+.+ ||+.. ..+++++++++++|.+++++
T Consensus 317 l~~~~~i~~vrG~-Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 317 LSEERGLEGERGE-GLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred HhhcCCcCeEEcc-eeEEEEEecCchHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 5221112223333 333333332 23333333444 99997543 88763 34899999999999998865
No 266
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.70 E-value=3.7e-14 Score=136.49 Aligned_cols=298 Identities=15% Similarity=0.116 Sum_probs=188.5
Q ss_pred CCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH-HHHhhCC
Q 013839 86 LESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH-NIWRDAQ 164 (435)
Q Consensus 86 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~-~~~~~~g 164 (435)
..|........|.+++++++ |.. .++ .+++|+.|++++ +...++|||.| +..++.... ..+...|
T Consensus 72 d~Yagd~s~~~LE~~vAe~l-G~e-------~aV--~v~sGTaAl~ll--~~l~v~pGd~V--p~n~~f~Tt~ahI~~~G 137 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYY-GFK-------HVV--PTHQGRGAENLL--SRIAIKPGQYV--PGNMYFTTTRYHQELNG 137 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHH-CCC-------eEE--EeCCHHHHHHHH--HHhCCCCcCEE--CCccchHhhHHHHHhCC
Confidence 44888888889999999998 432 334 799999999986 44457899975 555444333 3367788
Q ss_pred CCeeeeee--------cCCCCCCcChHhHHHHhhcC-CCCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCceeeee
Q 013839 165 IPERTYHY--------YDPDSKSLDFAALMDDIKNA-PDSSFFLLHPSAHNPT-GVDPTEEQWREISYQFKVKGHFPFFD 234 (435)
Q Consensus 165 ~~~~~v~~--------~~~~~~~~d~e~l~~~i~~~-~~~~~~v~~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~vi~D 234 (435)
+..+.+.. .++.++.+|++.+++.+++. .+++.++.+.+++|-. |...+.+++++|.++|++||+.||+|
T Consensus 138 a~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 138 GIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred cEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 86555531 12446889999999999753 2344556666778888 78889999999999999999999999
Q ss_pred ccCCCc----c------CCCCcccHHHHHHhh-h-cCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHH
Q 013839 235 MAYQGF----A------SGDLDKDAQAIRIFL-E-DEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI 302 (435)
Q Consensus 235 eay~~~----~------~~~~~~~~~~~~~~~-~-~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~ 302 (435)
.+...- . +.+ .++.... + ..--+.++.|++|.++.+ . -|+++ +++++ +.++++..
T Consensus 218 aAra~gna~fI~~re~~y~~-----~~i~ei~~e~~s~aD~~t~S~~K~~~~~-~-GG~i~--t~D~e----L~~~~r~~ 284 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQD-----KSIKEIVHEMFSYADGCTMSGKKDCLVN-I-GGFLA--MNDEE----LFDEAKEL 284 (460)
T ss_pred CcchhcChhhhcccccccCC-----CcHhHHhhhccCcCcEEEEeCCCCCCCC-C-ceEEE--ECCHH----HHHHHHHh
Confidence 994211 1 111 1221100 0 012356677899998754 1 26664 66787 77777765
Q ss_pred hh-----ccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecC-
Q 013839 303 AR-----AMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSG- 376 (435)
Q Consensus 303 ~~-----~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~- 376 (435)
.- ..+.+.+.-...+++..|.+.- ++ .+.+.--...++|.+.|.+.|.| +..|.+|--++++
T Consensus 285 ~~~~eG~~tygg~~grd~~alAvgl~E~~------~~--~y~~~ri~~~~~l~~~L~~~Gvp----v~~p~ggH~v~vda 352 (460)
T PRK13237 285 VVVYEGMPSYGGMAGRDMEAMAIGIEESV------QY--EYIEHRVGQVRYLGEKLLAAGVP----IVEPVGGHAVFLDA 352 (460)
T ss_pred ccccCCCcCCCChhhhHHHHHHhHHHhhc------hH--HHHHHHHHHHHHHHHHHHHCCCc----eecCCCceEEEEEh
Confidence 21 1222333323334433343221 11 22222233557888899888854 6667777444452
Q ss_pred ------C-----C-HHHHHHHhhhccEEEeCCC---------------------cEEecc--CCCCcHHHHHHHHHHHHH
Q 013839 377 ------L-----T-PYQVDRLAKEFHIYMTQDG---------------------RISMAG--VTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 377 ------~-----~-~~~~~~ll~~~gI~i~pgg---------------------Ris~~~--~~~e~i~~~~~~l~~~l~ 421 (435)
+ . ..++..|..+.||-...-| |+.+.. .|.+.+++..++|..+.+
T Consensus 353 ~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~ 432 (460)
T PRK13237 353 RRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYK 432 (460)
T ss_pred HHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHH
Confidence 2 1 2345666677888775321 777642 277889999999998876
Q ss_pred h
Q 013839 422 S 422 (435)
Q Consensus 422 ~ 422 (435)
+
T Consensus 433 ~ 433 (460)
T PRK13237 433 H 433 (460)
T ss_pred h
Confidence 4
No 267
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.70 E-value=1.8e-14 Score=136.72 Aligned_cols=274 Identities=14% Similarity=0.121 Sum_probs=180.3
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH----HhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI----WRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~ 169 (435)
...|.+.++++-.+. +.. .+++|..|+..+ ++.++.+||+|++++..|++.... ++..|.++.+
T Consensus 65 ~~~lE~~~a~LEg~~--------~~~--afsSGmaAI~~~--~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~ 132 (396)
T COG0626 65 RDALEEALAELEGGE--------DAF--AFSSGMAAISTA--LLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTF 132 (396)
T ss_pred HHHHHHHHHHhhCCC--------cEE--EecCcHHHHHHH--HHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEE
Confidence 345666666654222 333 699999999998 888999999999999988777554 4467777776
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. .+.+.+++++.+ +++++|++.+|.|||-.+ .|+.+|+++|+++|+++|+|+.|..-.+..
T Consensus 133 ~d~-------~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q~----- 195 (396)
T COG0626 133 VDP-------GDDEALEAAIKE--PNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQR----- 195 (396)
T ss_pred ECC-------CChHHHHHHhcc--cCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccccC-----
Confidence 642 245566666652 479999999999999655 567799999999999999999975543321
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhh-ccccCCChhHHHHHHHHhCChhhH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIAR-AMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
++ + ..-+|++.|.+|.++-.+-=+|-++ ++++++ +.+.+...+. .....+++...+.+.+-++
T Consensus 196 -PL----~-~GaDIVvhSaTKyl~GHsDvl~G~v-~~~~~~----~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk----- 259 (396)
T COG0626 196 -PL----E-LGADIVVHSATKYLGGHSDVLGGVV-LTPNEE----LYELLFFAQRANTGAVLSPFDAWLLLRGLR----- 259 (396)
T ss_pred -hh----h-cCCCEEEEeccccccCCcceeeeEE-ecChHH----HHHHHHHHHHhhcCCCCCHHHHHHHHhccc-----
Confidence 11 1 2458999999999975555555554 354555 5555543333 2444556665555544443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc-c----------------cCcceeEecCCCHHHHHHHhhhccE
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI-T----------------NQLGMFCFSGLTPYQVDRLAKEFHI 391 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~----------------~~~g~~~~~~~~~~~~~~ll~~~gI 391 (435)
-+....++..++...+.+.|++.+.- -.++ + ..||+|.|.=-+.+.+.++++.-.+
T Consensus 260 -----TL~~Rm~~~~~nA~~IA~~L~~~p~V--~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l 332 (396)
T COG0626 260 -----TLALRMERHNENALKIAEFLADHPKV--KKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKL 332 (396)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHhcCCCe--EEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCc
Confidence 34556677777888888888876531 1111 1 2466666552221555555554444
Q ss_pred EE---eCCC-------------------------------cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 392 YM---TQDG-------------------------------RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 392 ~i---~pgg-------------------------------Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
.. .-|| |+|++- |+++.+++-|.+.++.
T Consensus 333 ~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 333 FKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAK 394 (396)
T ss_pred cEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHh
Confidence 43 2221 999865 7888888888888764
No 268
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.4e-14 Score=133.30 Aligned_cols=335 Identities=17% Similarity=0.194 Sum_probs=216.0
Q ss_pred hhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhc-CCCC------CCCCCCc---ccHHHHHHHHHhHc
Q 013839 37 INGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA-GSEF------LESISAS---VSTKMVEESVKLVY 106 (435)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~Y~~~~---g~~~lr~~ia~~l~ 106 (435)
+++.+++-...+ .+.|+|=..+ | ..++.+.++..... +... .-|+... ....|....++.++
T Consensus 14 i~~~i~~e~~rq-~~~ieLIASE----N---~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LF 85 (413)
T COG0112 14 IFEAIQQELERQ-REHIELIASE----N---FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLF 85 (413)
T ss_pred HHHHHHHHHHHH-hhceeeeecc----c---cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHh
Confidence 455554333322 4778887776 2 34556666655544 2111 2244332 23455666667778
Q ss_pred CCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHH---hhCC--CCeeeeeecCCCCCCcC
Q 013839 107 GKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIW---RDAQ--IPERTYHYYDPDSKSLD 181 (435)
Q Consensus 107 ~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~---~~~g--~~~~~v~~~~~~~~~~d 181 (435)
+.+.. || ...+|+.|+..+ ++++++|||+|+-.+...++|...- ...| .+.+.|++ +.++..+|
T Consensus 86 ga~~a-----nV---QPhSGs~AN~av--~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~v-d~et~~ID 154 (413)
T COG0112 86 GAEYA-----NV---QPHSGSQANQAV--YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGV-DPETGLID 154 (413)
T ss_pred CCCcc-----cc---CCCCchHHHHHH--HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccc-ccccCccC
Confidence 87654 44 478999998888 8999999999999887777765432 1222 35777887 56778999
Q ss_pred hHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccC-CCccCCCCcccHHHHHHhhhcCC
Q 013839 182 FAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAY-QGFASGDLDKDAQAIRIFLEDEH 260 (435)
Q Consensus 182 ~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay-~~~~~~~~~~~~~~~~~~~~~~~ 260 (435)
.|++++...+ .++++++......|- .-+++++.++|.+.|+++++|.++ .++.-++..++ + ...
T Consensus 155 yD~~~k~a~e--~kPK~ii~G~SaY~r-----~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~--P------~~~ 219 (413)
T COG0112 155 YDEVEKLAKE--VKPKLIIAGGSAYSR-----PIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPN--P------LPH 219 (413)
T ss_pred HHHHHHHHHH--hCCCEEEECcccccc-----ccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCC--C------CCc
Confidence 9999999886 457888865433333 346789999999999999999995 44544432111 1 123
Q ss_pred eEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHH-HHHHhCChhhHHHHHHHHHHHH
Q 013839 261 LIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILL-VATILSDPNLKSLWIDEVKIMA 339 (435)
Q Consensus 261 ~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~-~~~~l~~~~l~~~~~~~~~~~~ 339 (435)
..++.+|.+|++ +|-|-|.+. +.+++ +.+++.+...+...+-|..-..| .+-++.+. + +-..+++.
T Consensus 220 AdvVTtTTHKTl--rGPrGG~Il--~~~ee----l~kkin~aVFPg~qggpl~HviAakaVa~~Ea-l----~p~fk~Ya 286 (413)
T COG0112 220 ADVVTTTTHKTL--RGPRGGIIL--TNDEE----LAKKINSAVFPGLQGGPLMHVIAAKAVAFKEA-L----EPEFKEYA 286 (413)
T ss_pred cceEeCCcccCC--CCCCceEEE--eccHH----HHHHhhhhcCCccCCChHHHHHHHHHHHHHHH-c----ChhHHHHH
Confidence 578899999997 788877774 64556 88888886655444433332222 22233221 1 12336666
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCccccccCcceeEec------CCCHHHHHHHhhhccEEEeCC-------------C-cE
Q 013839 340 DRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS------GLTPYQVDRLAKEFHIYMTQD-------------G-RI 399 (435)
Q Consensus 340 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~ll~~~gI~i~pg-------------g-Ri 399 (435)
++..++.+.|.+.|.+.|+ ++.....-.++++ +++...++.+|.+.||.+-.. | ||
T Consensus 287 ~qVv~NAkaLAe~l~~~G~----~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRi 362 (413)
T COG0112 287 KQVVKNAKALAEALKERGF----KVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRI 362 (413)
T ss_pred HHHHHHHHHHHHHHHHcCC----eEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCcccee
Confidence 7777888888889888874 4544332233433 346778899999999999633 3 77
Q ss_pred Eec-----cCCCCcHHHHHHHHHHHHHh
Q 013839 400 SMA-----GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 400 s~~-----~~~~e~i~~~~~~l~~~l~~ 422 (435)
... ++.+++++++.+-|.+++..
T Consensus 363 Gtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 363 GTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred ccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 532 23677888888888888764
No 269
>PLN02271 serine hydroxymethyltransferase
Probab=99.68 E-value=2.6e-14 Score=139.68 Aligned_cols=329 Identities=17% Similarity=0.149 Sum_probs=197.7
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcC-CCCCCC------CCCccc---HHHHHHHHHhHcCCCCccccCCCee
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG-SEFLES------ISASVS---TKMVEESVKLVYGKDSDVVKEGRSA 119 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y------~~~~g~---~~lr~~ia~~l~~~~~~~~~~~~v~ 119 (435)
.+.|+|=.++ -..++.+.++...... ....+| ...... ..|....++.+++.+.... --||
T Consensus 148 ~~~l~LIASE-------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~-gaNV- 218 (586)
T PLN02271 148 FKGIELIASE-------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKW-GVNV- 218 (586)
T ss_pred hcCeeecccc-------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCccccc-ccce-
Confidence 5667776665 2345565655555442 222223 222222 2333334444555432100 0133
Q ss_pred eEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHH---------hhCCCC--eeeeeecCCCCCCcChHhHHHH
Q 013839 120 GVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIW---------RDAQIP--ERTYHYYDPDSKSLDFAALMDD 188 (435)
Q Consensus 120 ~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~---------~~~g~~--~~~v~~~~~~~~~~d~e~l~~~ 188 (435)
...+|+.|+..+ +.+++.|||+|+..+..++++.... ...|.. .++|++ +++++.+|.+++++.
T Consensus 219 --Qp~SGs~AN~aV--~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~-d~~~g~IDyd~lek~ 293 (586)
T PLN02271 219 --QPYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKV-NPQTGYIDYDKLEEK 293 (586)
T ss_pred --eeccHHHHHHHH--HHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccc-ccccCccCHHHHHHH
Confidence 466899998888 8888999999999998887775532 223433 344445 355678999999985
Q ss_pred hhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCC-ccCCCCcccHHHHHHhhhcCCeEEEEec
Q 013839 189 IKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQG-FASGDLDKDAQAIRIFLEDEHLIGCAQS 267 (435)
Q Consensus 189 i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s 267 (435)
... .++++|++....||. .+ +++++.++|+++|+++++|.++.. +...+. .+.+ .....++.+|
T Consensus 294 a~~--~rPKLII~g~Saypr--~~---D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~--~~sP------~~~aDvvt~T 358 (586)
T PLN02271 294 ALD--FRPKILICGGSSYPR--EW---DYARFRQIADKCGAVLMCDMAHISGLVAAKE--CVNP------FDYCDIVTST 358 (586)
T ss_pred hhh--cCCeEEEECchhccC--cC---CHHHHHHHHHHcCCEEEEECcccccccccCc--CCCC------CcCCcEEEeC
Confidence 432 678999998778883 33 456889999999999999999532 222211 0001 1235688999
Q ss_pred ccccccccCCcccEEEEEecChhH----------------HHHHHHHHHHHhhccc-cCCChhHHHHHHHHhCChhhHHH
Q 013839 268 YAKSMGLYGHRVGCLSILCVDSKQ----------------AAAIRSQIQQIARAMY-GSPPVHGILLVATILSDPNLKSL 330 (435)
Q Consensus 268 ~SK~~g~~G~RvG~~~~~~~~~~~----------------~~~~~~~l~~~~~~~~-~~~~~~~q~~~~~~l~~~~l~~~ 330 (435)
.+|++ .|-|-|.+. + +++. -.++.+++.+...+.. .++......+.+.++....
T Consensus 359 THKtL--rGPrGG~I~--~-r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~---- 429 (586)
T PLN02271 359 THKSL--RGPRGGIIF--Y-RKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVA---- 429 (586)
T ss_pred CcccC--CCCCceEEE--e-cccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHh----
Confidence 99997 566667775 3 3210 0014455554443322 2233333333444444211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeE-ec-----CCCHHHHHHHhhhccEEEe----------
Q 013839 331 WIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFC-FS-----GLTPYQVDRLAKEFHIYMT---------- 394 (435)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~-~~-----~~~~~~~~~ll~~~gI~i~---------- 394 (435)
....+++.++..++.+.|.+.|.+.|+ ++.....-.++ ++ +++...+++.|++.||.+-
T Consensus 430 -~~efk~Ya~QVv~NAkaLA~~L~~~G~----~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~ 504 (586)
T PLN02271 430 -TPEYKAYMQQVKKNAQALASALLRRKC----RLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGT 504 (586)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHHCCC----eEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCC
Confidence 122367788888899999999988885 34332222233 33 3467888999999999883
Q ss_pred --CCC-cEEec-----cCCCCcHHHHHHHHHHHHH
Q 013839 395 --QDG-RISMA-----GVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 395 --pgg-Ris~~-----~~~~e~i~~~~~~l~~~l~ 421 (435)
|+| ||... ++.+++++++.+-|.++++
T Consensus 505 ~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 505 ISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 334 88632 3467888888888887775
No 270
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.68 E-value=2.6e-16 Score=142.49 Aligned_cols=284 Identities=14% Similarity=0.083 Sum_probs=162.5
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCC----C--CEEEEcCCCChhhHHHHhhCCCCe
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHP----E--SHIYFPDPTWSNHHNIWRDAQIPE 167 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~----g--d~Vlv~~p~y~~~~~~~~~~g~~~ 167 (435)
.++|.+.|-+.+.-.++. +.++.. .++..|+++-+..+ +.++..+ + -.|+...|.|+.|........-..
T Consensus 45 s~eL~~~Ir~LH~~VGNA-vt~gr~-IV~GtGsTQL~~Aa--lyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~ 120 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNA-VTDGRY-IVFGTGSTQLFNAA--LYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRL 120 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB---TTSE-EEEECHHHHHHHHH--HHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTT
T ss_pred cHHHHHHHHHHHHHhccc-cccCcE-EEEcCCHHHHHHHH--HHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccC
Confidence 477888887776222221 222332 22677777777766 4444211 1 478999999999987765443222
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
....= |...| . .+..+.+-+=++++||||.|..-. . +++..+..+|.|-||..=.|.+
T Consensus 121 y~w~G-da~~~-------~---~~~~~~~~IElVTSPNNPDG~lr~-----~---V~~g~~~k~I~D~AYYWPhyTp--- 178 (363)
T PF04864_consen 121 YKWAG-DASNF-------K---NSDNPSPYIELVTSPNNPDGQLRE-----A---VLNGSSGKVIHDLAYYWPHYTP--- 178 (363)
T ss_dssp EEEEE-ECCCG-------T---T-S-CCGEEEEEESS-TTT--------------SSTTTEEEEEEE-TT-STTTS----
T ss_pred ccccc-cHHhh-------c---cCCCCCCeEEEEeCCCCCcccccc-----h---hcCCCCcceeeeeeeecccccc---
Confidence 22221 12211 1 111145788899999999997521 2 2355566789999997766653
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhh
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNL 327 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l 327 (435)
+. ...+.+|.+.|+||.-|.+|.|+||.++ .+++ +.+++.++....+.+++.=+|.-++.+|+.--
T Consensus 179 ----I~---~~aD~DiMLFT~SK~TGHAGSR~GWAlV--KD~~----Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~- 244 (363)
T PF04864_consen 179 ----IT---APADHDIMLFTLSKLTGHAGSRFGWALV--KDEE----VAKKMTKYMELNTIGVSRDSQLRALKILKVVL- 244 (363)
T ss_dssp ---------S-B--SEEEEEHHHHCS-GGG-EEEEEE--S-HH----HHHHHHHHHHHHCSS--HHHHHHHHHHHHHHH-
T ss_pred ----cC---CCCCCceEEEEEecccCccccccceeee--cCHH----HHHHHHHHHHHhcccCcHHHHHHHHHHHHHHH-
Confidence 21 2246789999999999999999999974 6888 88899999888899999999988888775311
Q ss_pred HHHHH------HHHHHHHHHHHHHHHHHHHHHHhhCC-------CC---CccccccCcceeEecCCCH---HHHHHHhhh
Q 013839 328 KSLWI------DEVKIMADRIQRKRTTLRQNLEKLGS-------SL---NWEHITNQLGMFCFSGLTP---YQVDRLAKE 388 (435)
Q Consensus 328 ~~~~~------~~~~~~~~~~~~~~~~l~~~l~~~~~-------~~---~~~~~~~~~g~~~~~~~~~---~~~~~ll~~ 388 (435)
+.+. +...--++.++++-+.|.+.+..-.. |. .+........-|.|+++.. +.+...|++
T Consensus 245 -~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~ 323 (363)
T PF04864_consen 245 -DGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLRE 323 (363)
T ss_dssp -HHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHC
T ss_pred -hcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHh
Confidence 0000 01122233444444555555543221 00 1111222345699998742 378888899
Q ss_pred ccEEEeCC---C------cEEeccCCCCcHHHHHHHHHHH
Q 013839 389 FHIYMTQD---G------RISMAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 389 ~gI~i~pg---g------Ris~~~~~~e~i~~~~~~l~~~ 419 (435)
.||..+.| | |+|+.. ++++++.++++|.++
T Consensus 324 ~~I~tr~G~~fga~~ryVRlSml~-~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 324 AKIITRSGVLFGADSRYVRLSMLK-RDDDFDQLLERLSKL 362 (363)
T ss_dssp TTEEEEEGGGGTS-TTEEEEESSS--HHHHHHHHHHHHCC
T ss_pred CCcccCCCCccCCCCCeEEEeccC-CHHHHHHHHHHHHhh
Confidence 99999988 3 999976 889999999999764
No 271
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=1.6e-14 Score=143.44 Aligned_cols=288 Identities=17% Similarity=0.170 Sum_probs=169.1
Q ss_pred HHHHHHHhHcCCCCccccCCCee-eEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh----------CCC
Q 013839 97 MVEESVKLVYGKDSDVVKEGRSA-GVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD----------AQI 165 (435)
Q Consensus 97 lr~~ia~~l~~~~~~~~~~~~v~-~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~----------~g~ 165 (435)
.|+.+++++ +.. ++++. .+.+.+|++|+.++ +.+++++||+|++....+..+...... .+.
T Consensus 85 ar~~~a~lf-~a~-----~~~~~~~~~~~sgt~an~~v--~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~ 156 (452)
T PTZ00094 85 CQKRALEAF-GLD-----PEEWGVNVQPYSGSPANFAV--YTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYF 156 (452)
T ss_pred HHHHHHHHh-CCC-----cccceeecCCCchHHHHHHH--HHHhcCCCCEEEecccccCCcccccccccccccccceeee
Confidence 344566666 332 33443 11237889998887 677788999999977666554332211 112
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDL 245 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~ 245 (435)
++..++. +. ++.+|+++|++.+++. +++++++. ++.+|...+.+ +|.++|+++|+++++|+++. ++.-+.
T Consensus 157 ~~~~~~~-~~-~g~id~~~L~~~l~~~--~~~lvi~~--~s~~g~~~di~---~I~~i~~~~ga~l~vDaaq~-~G~i~~ 226 (452)
T PTZ00094 157 ESLPYQV-NE-KGLIDYDKLEELAKAF--RPKLIIAG--ASAYPRDIDYK---RFREICDSVGAYLMADIAHT-SGLVAA 226 (452)
T ss_pred eeeeccc-CC-CCCcCHHHHHHHHHHh--CCCEEEEe--CCCCCCccCHH---HHHHHHHHcCCEEEEeccch-hccccC
Confidence 3334444 22 4789999999999642 34555553 34588777655 78888999999999999953 332111
Q ss_pred cccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc-ccCCChhHHHHHHHHhCC
Q 013839 246 DKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM-YGSPPVHGILLVATILSD 324 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~ 324 (435)
+.. + . +....++++.|.+|+++ |.+.|++. + +++..+.+...+....... ..+++.....++..+++.
T Consensus 227 ~~~--~---~-~~~~~D~l~~S~hK~l~--GP~Gg~l~--~-~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~ 295 (452)
T PTZ00094 227 GVL--P---S-PFPYADVVTTTTHKSLR--GPRSGLIF--Y-RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKE 295 (452)
T ss_pred CCC--C---C-CCCCCcEEEcCCccCCC--CCCceEEE--E-ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHH
Confidence 100 0 0 11135688999999773 33336765 3 4442222322222211111 123444444445455532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc--CcceeE-ec---CCCHHHHHHHhhhccEEEe-C--
Q 013839 325 PNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN--QLGMFC-FS---GLTPYQVDRLAKEFHIYMT-Q-- 395 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~g~~~-~~---~~~~~~~~~ll~~~gI~i~-p-- 395 (435)
-. ....+.+++++.++++++.+.|++.|. .+..+ ...... .+ +.+.+.+..+|+++||.+. +
T Consensus 296 ~~-----~~~~~~~~~~i~~l~~~l~~~L~~~g~----~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~ 366 (452)
T PTZ00094 296 VQ-----SPEWKEYAKQVLKNAKALAAALEKRGY----DLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTI 366 (452)
T ss_pred Hh-----ChhHHHHHHHHHHHHHHHHHHHHhCCc----EEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccC
Confidence 10 134466778889999999999987663 23221 111111 11 3466777777788899994 2
Q ss_pred ---------CC-cEEeccC-----CCCcHHHHHHHHHHHHHh
Q 013839 396 ---------DG-RISMAGV-----TTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 396 ---------gg-Ris~~~~-----~~e~i~~~~~~l~~~l~~ 422 (435)
++ |+|+... ++++++++++.|++++..
T Consensus 367 p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 367 PGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred CCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 22 8886432 379999999999998874
No 272
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=9.9e-14 Score=135.98 Aligned_cols=155 Identities=12% Similarity=-0.026 Sum_probs=115.5
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH----HHHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH----NIWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~ 169 (435)
...+++.++++..+. +.+ .+.+|+.|+.++ +++++.+||+|++++..|.+.. ..+...|++++.
T Consensus 71 ~~~le~~la~l~g~~-------~~v---~fsSG~~Ai~~a--l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~ 138 (437)
T PRK05613 71 VEALENRIASLEGGV-------HAV---AFASGQAAETAA--ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTF 138 (437)
T ss_pred HHHHHHHHHHHhCCC-------eEE---EeCCHHHHHHHH--HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEE
Confidence 457778888877332 123 577888898776 6777899999999999998764 345678988888
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++. . .|+++++++++ ++++++++.++.||+|.+.+ +++|.++|+++|+++|+|.++...... .
T Consensus 139 vd~--~----~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~~----~- 201 (437)
T PRK05613 139 VEN--P----DDPESWQAAVQ---PNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAALV----R- 201 (437)
T ss_pred ECC--C----CCHHHHHHhCC---ccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccccc----C-
Confidence 851 2 27899999998 67888988999999997765 669999999999999999996332111 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEE
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLS 283 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~ 283 (435)
+. + ..-++++.|++|.++-.|.-+|.++
T Consensus 202 -p~----~-~GaDivv~S~~K~l~G~gd~~gG~v 229 (437)
T PRK05613 202 -PL----E-LGADVVVASLTKFYTGNGSGLGGVL 229 (437)
T ss_pred -hH----H-hCCCEEEeeccceecCCCcceeEEE
Confidence 11 1 1347889999999986676666665
No 273
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.66 E-value=2.4e-15 Score=129.04 Aligned_cols=165 Identities=18% Similarity=0.097 Sum_probs=123.7
Q ss_pred HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH-HHHhhCCCCeeeeeec
Q 013839 95 TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH-NIWRDAQIPERTYHYY 173 (435)
Q Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~ 173 (435)
.++++.+++++. .+ ++++. ++.||++|+.++ +..+..+|++|+++.++|.+.. ..+...|++++.++..
T Consensus 3 ~~~~~~l~~~~~-~~-----~~~~~--~~~~~t~a~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 3 EELEEKLARLLQ-PG-----NDKAV--FVPSGTGANEAA--LLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHcC-CC-----CCcEE--EeCCcHHHHHHH--HHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 578899998883 22 44666 888999999998 6666778999999999998888 7888899999998873
Q ss_pred CCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHH
Q 013839 174 DPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIR 253 (435)
Q Consensus 174 ~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 253 (435)
+......+.+.+++... .++++++++++++||+|...+. ++|.++|+++++++|+|++|..+...... .
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~------~ 141 (170)
T cd01494 73 DAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG------V 141 (170)
T ss_pred CCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc------c
Confidence 22222223334544332 2578999999999999998876 58888899999999999999887764210 0
Q ss_pred HhhhcCCeEEEEecccccccccCCcccEEE
Q 013839 254 IFLEDEHLIGCAQSYAKSMGLYGHRVGCLS 283 (435)
Q Consensus 254 ~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~ 283 (435)
. ......++++.|++|.++. .++|+++
T Consensus 142 ~-~~~~~~d~~~~s~~K~~~~--~~~G~l~ 168 (170)
T cd01494 142 L-IPEGGADVVTFSLHKNLGG--EGGGVVI 168 (170)
T ss_pred c-cccccCCEEEEEcccccCC--CceEEEE
Confidence 1 1123467888999999984 6789986
No 274
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.66 E-value=1e-14 Score=141.04 Aligned_cols=256 Identities=14% Similarity=0.027 Sum_probs=154.1
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhhHHHHhhCCCCeeee
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNHHNIWRDAQIPERTY 170 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v 170 (435)
.-..++.+++++++... +.+ .+++|+.|+.++ +.++ +++||+|++|..+|......+...|++++.+
T Consensus 25 ~~~~~fE~~~a~~~g~~--------~~~--~~~sgt~Al~~a--l~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~ 92 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVK--------YAV--AVSSGTSALHLA--LRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFV 92 (363)
T ss_dssp HHHHHHHHHHHHHHTSS--------EEE--EESSHHHHHHHH--HHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHHHHHHhCCC--------eEE--EeCChhHHHHHH--HHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEE
Confidence 34678999999998433 344 799999999998 4443 5699999999999999999999999999999
Q ss_pred eecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHH
Q 013839 171 HYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQ 250 (435)
Q Consensus 171 ~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~ 250 (435)
++ +++++.+|++.++++++ +++++|++. +.-|.. .++++|.++|++||++||+|.+.........
T Consensus 93 Di-~~~~~~id~~~~~~~i~---~~t~ai~~~---h~~G~~---~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g----- 157 (363)
T PF01041_consen 93 DI-DPETLNIDPEALEKAIT---PKTKAILVV---HLFGNP---ADMDAIRAIARKHGIPLIEDAAQAFGARYKG----- 157 (363)
T ss_dssp -B-ETTTSSB-HHHHHHHHH---TTEEEEEEE----GGGB------HHHHHHHHHHTT-EEEEE-TTTTT-EETT-----
T ss_pred ec-cCCcCCcCHHHHHHHhc---cCccEEEEe---cCCCCc---ccHHHHHHHHHHcCCcEEEccccccCceeCC-----
Confidence 99 57889999999999999 788888873 344443 3788999999999999999999544332110
Q ss_pred HHHHhhhcCCeEEEEecc--cccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccc-----------------cCCC
Q 013839 251 AIRIFLEDEHLIGCAQSY--AKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMY-----------------GSPP 311 (435)
Q Consensus 251 ~~~~~~~~~~~~i~~~s~--SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------------~~~~ 311 (435)
+.....+ .+.+.|| +|.+. .|. .|.++ +.+++ +.++++.+..... ..++
T Consensus 158 --~~~G~~g--d~~~fSf~~~K~i~-~ge-GG~v~--~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~ 225 (363)
T PF01041_consen 158 --RPVGSFG--DIAIFSFHPTKIIT-TGE-GGAVV--TNDPE----LAERARALRNHGRSRDAFRRYRHELPPGYNFRMS 225 (363)
T ss_dssp --EETTSSS--SEEEEESSTTSSS--SSS--EEEE--ESTHH----HHHHHHHHTBTTEETSECSTTEESSSS--B-B-B
T ss_pred --EeccCCC--CceEecCCCCCCCc-CCC-CeeEE--ecHHH----HHHHhhhhhccCcCccccccccccccCCcccccH
Confidence 1111112 4555565 69885 443 25664 65677 6666655432111 1122
Q ss_pred hhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC--cceeEec---C----CCHHHH
Q 013839 312 VHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ--LGMFCFS---G----LTPYQV 382 (435)
Q Consensus 312 ~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~g~~~~~---~----~~~~~~ 382 (435)
.+....+..-| +.+++..++-+++.+.+.+.|..++.-......... ..++.+. . .+.+.+
T Consensus 226 ~~~AAigl~QL----------~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l 295 (363)
T PF01041_consen 226 ELQAAIGLAQL----------KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDEL 295 (363)
T ss_dssp HHHHHHHHHHH----------HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHH
T ss_pred HHHHHHHHHHH----------HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHH
Confidence 22211111112 334444455556666777788776531001111111 1222222 2 245666
Q ss_pred HHHhhhccEEEeCC
Q 013839 383 DRLAKEFHIYMTQD 396 (435)
Q Consensus 383 ~~ll~~~gI~i~pg 396 (435)
.+.|++.||.+.+.
T Consensus 296 ~~~L~~~GI~~~~~ 309 (363)
T PF01041_consen 296 VEALRARGIETRPH 309 (363)
T ss_dssp HHHHHHTTBEEBCS
T ss_pred HHHHHHCCCccccc
Confidence 55667789999864
No 275
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.66 E-value=5.8e-14 Score=132.39 Aligned_cols=342 Identities=15% Similarity=0.086 Sum_probs=204.3
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCC-cccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISA-SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.+++..||+..|+-+.--|+.. +.+.+++.+++..+ ..|..+ .-.-++-|.+.+.+.. .+.|- ++++
T Consensus 50 vDGn~YIDy~~~~Gp~ilGH~~-p~V~~Av~~~l~~G--~~fg~Pte~Ei~~Aell~~~~p~-------~e~vr--fvnS 117 (432)
T COG0001 50 VDGNEYIDYVLGWGPLILGHAH-PAVVEAVQEQLERG--LSFGAPTELEVELAELLIERVPS-------IEKVR--FVNS 117 (432)
T ss_pred CCCCEeeehhccCcccccCCCC-HHHHHHHHHHHHhc--CCCCCCCHHHHHHHHHHHHhcCc-------ccEEE--Eecc
Confidence 4678899988887322233222 23445555555555 234443 3333455555555422 24677 8999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCC--CC------eeeeeecCCCC----CCcChHhHHHHhhcC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQ--IP------ERTYHYYDPDS----KSLDFAALMDDIKNA 192 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g--~~------~~~v~~~~~~~----~~~d~e~l~~~i~~~ 192 (435)
||+|...+..+.+-...-|+|+..+-+|.++.+.+. ..| .. ...+|-....+ ---|++.+++++++.
T Consensus 118 GTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~ 197 (432)
T COG0001 118 GTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEY 197 (432)
T ss_pred hhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHc
Confidence 999988886555545555999999999988876543 222 11 00111100000 012889999999987
Q ss_pred CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccc
Q 013839 193 PDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKS 271 (435)
Q Consensus 193 ~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 271 (435)
+++..+|++.....-.|.+. .++.+++|.++|++||+++|.||+..+|...-. ......-. .+| +.++.|.
T Consensus 198 g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~g--Gaq~~~gi--~PD----lttlGKi 269 (432)
T COG0001 198 GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALG--GAQGYYGV--EPD----LTTLGKI 269 (432)
T ss_pred CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCc--ccccccCc--Ccc----hhhhhhh
Confidence 66777777755444456644 566799999999999999999999877765410 01111111 111 4568999
Q ss_pred ccccCCcccEEEEEecChhHHHHHHHHHHHHh---hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA---RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTT 348 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 348 (435)
.| .|+.+|..-+ .++ +++.+.... +..+.+-++++..|..+.|..-. .. ....+.+.+.-.+.++-
T Consensus 270 IG-GGlP~ga~gG---r~e----iM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~--~~-~~~y~~l~~~~~~L~~g 338 (432)
T COG0001 270 IG-GGLPIGAFGG---RAE----IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELM--TE-EGVYERLDALGERLAEG 338 (432)
T ss_pred hc-CCcceeeecc---HHH----HHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHH--hc-ccHHHHHHHHHHHHHHH
Confidence 99 9999998843 777 777555432 23455566666666655554221 00 01123333333444445
Q ss_pred HHHHHHhhCCCCCccccccCcceeEec--C--C---------CH----HHHHHHhhhccEEEeCCC----cEEeccCCCC
Q 013839 349 LRQNLEKLGSSLNWEHITNQLGMFCFS--G--L---------TP----YQVDRLAKEFHIYMTQDG----RISMAGVTTG 407 (435)
Q Consensus 349 l~~~l~~~~~~~~~~~~~~~~g~~~~~--~--~---------~~----~~~~~ll~~~gI~i~pgg----Ris~~~~~~e 407 (435)
+.+.+.+.+.+ +.+ ...+++|.+. . . +. .++..+| ++||++.|+. -+|... +++
T Consensus 339 l~~~~~~~g~~--~~v-~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~~ea~flS~ah-te~ 413 (432)
T COG0001 339 LRAAAERHGIP--LTV-NRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQFEAGFLSTAH-TEE 413 (432)
T ss_pred HHHHHHHhCCC--eEE-eeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCccccceeeeccc-CHH
Confidence 55555666754 332 2344555432 1 1 11 2445554 5899999984 556544 899
Q ss_pred cHHHHHHHHHHHHHhhh
Q 013839 408 NVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 408 ~i~~~~~~l~~~l~~~~ 424 (435)
+|++.++++.++++++.
T Consensus 414 di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 414 DIDRTLEAADEAFKELA 430 (432)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999887654
No 276
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.65 E-value=1.2e-13 Score=133.04 Aligned_cols=210 Identities=12% Similarity=0.055 Sum_probs=135.2
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhH----HHHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHH----NIWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~ 169 (435)
..+|-+.++++..+. ..+ .+++|+.|+.++ +.+++.+||+|+++.+.|.+.. ..+...|++++.
T Consensus 66 ~~~lE~~la~leg~~--------~av--~~sSG~aAi~~a--l~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~f 133 (384)
T PRK06434 66 VQAFEEKYAVLENAE--------HAL--SFSSGMGAITSA--ILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDY 133 (384)
T ss_pred HHHHHHHHHHHhCCC--------cEE--EeCCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEE
Confidence 356777777776332 233 799999999988 7778899999999988765554 456678999998
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++..+.+++. +. ++++++|++.+|.|||+.+ .++++|+++|++++ +++|.++..-...
T Consensus 134 vd~~~~~~~~---------l~--~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~~~------ 191 (384)
T PRK06434 134 IDTDRLNSLD---------FD--PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPYNQ------ 191 (384)
T ss_pred ECCCChhhee---------ec--CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcccC------
Confidence 8763222221 22 1368999999999999876 46779999999998 4569995321111
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKS 329 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~ 329 (435)
.++ + ..-++++.|.+|.++-+|--+|-++ ++.+++ +.++++..........+.+..+.+..-|
T Consensus 192 ~pl----~-~gaDivv~S~tK~i~G~~d~~gG~v-v~~~~~----~~~~~~~~~~~~G~~~~~~~A~l~~~gL------- 254 (384)
T PRK06434 192 NPL----D-LGADVVIHSATKYISGHSDVVMGVA-GTNNKS----IFNNLVERRKTLGSNPDPIQAYLALRGL------- 254 (384)
T ss_pred Cch----h-cCCCEEEeecccccCCCCCceEEEE-ecCcHH----HHHHHHHHHHhcCCCCCHHHHHHHHhCC-------
Confidence 122 1 2347888899999975553344444 254565 5555554332233334443322222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 330 LWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.+....++.+++...+.+.|+.++
T Consensus 255 ---~tL~~R~~r~~~~a~~~a~~L~~~p 279 (384)
T PRK06434 255 ---KTLGLRMEKHNKNGMELARFLRDSK 279 (384)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3355666777778888888888775
No 277
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.65 E-value=1.5e-13 Score=136.07 Aligned_cols=340 Identities=15% Similarity=0.093 Sum_probs=191.7
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..||+..|.-...-| ...+++.+++.+++...... ..+..-..+|-+.+++.+.+ .+.+. ++++|
T Consensus 96 ~dG~~yiD~~~g~g~~~lG-h~~p~v~~av~~ql~~~~~~-~~~~~~~~~lAe~l~~~~p~-------~~~v~--f~~SG 164 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIG-HADDEVLAALAETMKKGTSF-GAPCLLENVLAEMVIDAVPS-------VEMVR--FVNSG 164 (474)
T ss_pred CCCCEEEEecccccccccC-CCCHHHHHHHHHHHhhCCCC-CCCCHHHHHHHHHHHHhCCC-------CCEEE--EeCCh
Confidence 3567788887765211122 12234555555555543222 11222222344444443311 24677 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hC--CCC------eeeeeecCCCC----CCcChHhHHHHhhcCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DA--QIP------ERTYHYYDPDS----KSLDFAALMDDIKNAP 193 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~--g~~------~~~v~~~~~~~----~~~d~e~l~~~i~~~~ 193 (435)
++|...+..+.......++|+....+|.++...+. .. +.. ...+|.....+ .--|++.+++.+.+++
T Consensus 165 sEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~ 244 (474)
T PLN02482 165 TEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANK 244 (474)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCC
Confidence 99999997666555444788888888888653211 10 000 00011000000 0017888998887655
Q ss_pred CCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc
Q 013839 194 DSSFFLLHPSAHNPTGVDPT-EEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 194 ~~~~~v~~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 272 (435)
.+..+|++.....-.|.+.+ ++.+++|.++|++||+++|+||+..++..+. ......+ +... + +.+++|.+
T Consensus 245 ~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~----~ga~~~~-gv~P-D--i~t~gK~l 316 (474)
T PLN02482 245 GEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY----GGAQEYF-GITP-D--LTTLGKVI 316 (474)
T ss_pred CceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc----chHhHHh-CCCC-C--EEEecchh
Confidence 56778888776666787664 6789999999999999999999987763321 1222222 2212 2 24789999
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHHh---hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQIA---RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTL 349 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 349 (435)
| .|+.+|.+++ +++ +++.+.... ...+.+.++++..++.+.|+.-. + ....+++.++.++|
T Consensus 317 g-gG~Pigav~g---~~e----i~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~------~--~~~~~~~~~~g~~l 380 (474)
T PLN02482 317 G-GGLPVGAYGG---RRE----IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQ------Q--PGTYEYLDKITKKL 380 (474)
T ss_pred h-CCCceEEEEE---cHH----HHHhhccCCCcccccCcchhHHHHHHHHHHHHHHh------c--cCHHHHHHHHHHHH
Confidence 8 8899998854 777 777664211 12344455666555555553210 1 23445555566666
Q ss_pred HHHHHhhCCCCCcccc-ccCcceeEe-c--C-C---------CH---HHHHHHhhhccEEEeCCC----cEEeccCCCCc
Q 013839 350 RQNLEKLGSSLNWEHI-TNQLGMFCF-S--G-L---------TP---YQVDRLAKEFHIYMTQDG----RISMAGVTTGN 408 (435)
Q Consensus 350 ~~~l~~~~~~~~~~~~-~~~~g~~~~-~--~-~---------~~---~~~~~ll~~~gI~i~pgg----Ris~~~~~~e~ 408 (435)
++.|+++....++... ...+|++.. + + . +. ..+.+.+.++||.+.|.+ .+++. .++++
T Consensus 381 ~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~~~psl~-ht~~d 459 (474)
T PLN02482 381 IQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEAGFTSLA-HTEED 459 (474)
T ss_pred HHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCCCcCCCC-CCHHH
Confidence 6666554321111222 233444321 1 1 0 11 133333446899998864 24443 38999
Q ss_pred HHHHHHHHHHHHHh
Q 013839 409 VNYLANAIHEVTRS 422 (435)
Q Consensus 409 i~~~~~~l~~~l~~ 422 (435)
|+++++++.+++++
T Consensus 460 Id~~l~al~~~l~~ 473 (474)
T PLN02482 460 IDFTIAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998864
No 278
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=1.5e-13 Score=135.58 Aligned_cols=343 Identities=13% Similarity=0.033 Sum_probs=190.8
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++...+|+..|.....-| ...+.+++++.+++...... ... .-..+....+|+.+...-... ..+++. ++++|
T Consensus 51 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~~~-~~~-~~~~~~~~~lAe~L~~~~p~~-~~~~v~--f~~SG 124 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNVG-HAHPKVVKAVKEQAEKFLHY-SLT-DFYYEPAVELAERLVEIAPGG-FEKKVF--FTNSG 124 (441)
T ss_pred CCCCEEEECCCchhhcccC-CCCHHHHHHHHHHHHhccCc-cCc-ccCCHHHHHHHHHHHHhCCCC-CCCEEE--ECCch
Confidence 4567889988875311122 12233444445554422111 000 001123344455442211000 024677 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh-CCC-------------CeeeeeecCCCC--CC-c--------C
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD-AQI-------------PERTYHYYDPDS--KS-L--------D 181 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~--~~-~--------d 181 (435)
++|++.+..+.......++|+...-+|.+....... .+. .+..++..+... +. - +
T Consensus 125 sEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (441)
T PRK05769 125 TESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAV 204 (441)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHH
Confidence 999999976555444447888888888777543221 111 112222210000 00 0 1
Q ss_pred hHhHHH-Hhhc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhh
Q 013839 182 FAALMD-DIKN--APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE 257 (435)
Q Consensus 182 ~e~l~~-~i~~--~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~ 257 (435)
++.+++ .+++ .+++..+|++.....-.|... +++.+++|.++|++||+++|.||++.+++..+. .+....+ +
T Consensus 205 ~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~---~~a~~~~-g 280 (441)
T PRK05769 205 LDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGK---MFAIEHF-G 280 (441)
T ss_pred HHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc---eehhhcc-C
Confidence 233555 2322 235677888776666677755 677899999999999999999999987765431 1122222 2
Q ss_pred cCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 013839 258 DEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKI 337 (435)
Q Consensus 258 ~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~ 337 (435)
....++ ++||.++ .|+++|++++ +++ +...+... ...+.+.+++++.++.+.|+.- +. .
T Consensus 281 v~pDiv---t~~K~l~-~G~p~gav~~---~~~----i~~~~~~~-~~~T~~g~p~~~aaa~a~L~~l-------~~--~ 339 (441)
T PRK05769 281 VEPDII---TLAKAIA-GGLPLGAVIG---RAE----LMFLPPGS-HANTFGGNPVAAAAALATLEEL-------EE--G 339 (441)
T ss_pred CCCCEE---EEccccc-CCcccEEEEE---ehh----hhhcCCCC-CCCCCCcCHHHHHHHHHHHHHH-------HH--H
Confidence 212233 4899999 7899999864 666 55433221 2334455777777777776432 11 4
Q ss_pred HHHHHHHHHHHHHHHHHhhC--CCCCccccccCcceeEecCC-------C---HHHHHHHhhhccEEEeCCC----cEEe
Q 013839 338 MADRIQRKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGL-------T---PYQVDRLAKEFHIYMTQDG----RISM 401 (435)
Q Consensus 338 ~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~-------~---~~~~~~ll~~~gI~i~pgg----Ris~ 401 (435)
..++.+++.++|++.|+++. .+ .+......| .+.-+.+ + ...+.+.+.++||.+.+.| ||+.
T Consensus 340 ~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p 417 (441)
T PRK05769 340 LLENAQKLGEYLRKELKELKEKYE-FIGDVRGLG-LMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIP 417 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-Ceeeeecce-EEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeC
Confidence 55667777777777776653 11 011222223 2332222 1 1223333346899998865 6764
Q ss_pred c-cCCCCcHHHHHHHHHHHHHh
Q 013839 402 A-GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 402 ~-~~~~e~i~~~~~~l~~~l~~ 422 (435)
. ..+++++++++++|.+++.+
T Consensus 418 ~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 418 PLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 3 24899999999999998864
No 279
>PRK06541 hypothetical protein; Provisional
Probab=99.64 E-value=3.3e-13 Score=133.75 Aligned_cols=344 Identities=11% Similarity=0.045 Sum_probs=194.6
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC---CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE---FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++...||+..|.....-| -..+.+++++.+++.... ...|.. ....++.+.+++... .. -+++. ++
T Consensus 49 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Av~~q~~~~~~~~~~~~~~-~~~~~la~~l~~~~p-~~-----~~~v~--f~ 118 (460)
T PRK06541 49 DRGKRYLDGLAGLFVVQVG-HGRAELAEAAAKQAGTLAFFPLWSYAH-PPAIELAERLAALAP-GD-----LNRVF--FT 118 (460)
T ss_pred CCCCEEEECCccHHhccCC-CCCHHHHHHHHHHHhhCcCccccccCC-HHHHHHHHHHHHhCC-CC-----cCEEE--Ec
Confidence 4678899998874211122 123344454555554221 111211 112234444444321 11 24677 89
Q ss_pred CCchhHHHHHHHHHHHh----C-C-CCEEEEcCCCChhhHHHHh-hCCC------------CeeeeeecCCCC---CCcC
Q 013839 124 LSGTGACRLFAEFQRRF----H-P-ESHIYFPDPTWSNHHNIWR-DAQI------------PERTYHYYDPDS---KSLD 181 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~----~-~-gd~Vlv~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~---~~~d 181 (435)
++|++|++.+..+.... . + ..+|+...-+|.+...... ..|. .+..+|..+... ++-+
T Consensus 119 ~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 198 (460)
T PRK06541 119 TGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDD 198 (460)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCC
Confidence 99999999997655543 1 2 3678888888876643222 1111 112222210000 1112
Q ss_pred --------hHhHHHHhhcC-CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHH
Q 013839 182 --------FAALMDDIKNA-PDSSFFLLHPSAHNPTGVDPT-EEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQA 251 (435)
Q Consensus 182 --------~e~l~~~i~~~-~~~~~~v~~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~ 251 (435)
++.+++.+.+. +....+|++...++++|.+.+ .+.+++|.++|++||+++|.||++.+|+..+ ..+.
T Consensus 199 ~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G---~~~a 275 (460)
T PRK06541 199 PEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLG---EMFG 275 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hhhh
Confidence 35677777542 345667776666999999865 8889999999999999999999998885432 1122
Q ss_pred HHHhhhcCCeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHHHhh----ccccCCChhHHHHHHHHhCChh
Q 013839 252 IRIFLEDEHLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQIAR----AMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 252 ~~~~~~~~~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
...+ +.... ++ ++||.++ .|+ ++|++++ +++ +.+.+..... ..+.+.++++..++.+.|+.-
T Consensus 276 ~~~~-gv~PD-iv--t~gK~l~-~G~~pigav~~---~~~----i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l- 342 (460)
T PRK06541 276 CERF-GYVPD-II--TCAKGIT-SGYSPLGAMIA---SDR----LFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIF- 342 (460)
T ss_pred hhhc-CCCCC-EE--Eeccccc-CCccceeEEEE---cHH----HHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHH-
Confidence 2222 22222 22 5899999 887 9999974 777 6665543211 124445556555555554321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEec--C-------CCH--------HHHHHHhhhc
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS--G-------LTP--------YQVDRLAKEF 389 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~--~-------~~~--------~~~~~ll~~~ 389 (435)
..+...++++++.++|.+.|+++..-..+......|.++.+- . ++. ..+...+.++
T Consensus 343 -------~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 415 (460)
T PRK06541 343 -------EREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEA 415 (460)
T ss_pred -------HhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhC
Confidence 012355777788888888887763100112234455444432 1 000 1233334568
Q ss_pred cEEEeCC--C----cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 390 HIYMTQD--G----RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 390 gI~i~pg--g----Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
||.+.+. | ||+.. ..+++++++++++|.+++++.
T Consensus 416 Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 416 GLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred CeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999863 3 67764 248999999999999998754
No 280
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.64 E-value=2.2e-14 Score=134.51 Aligned_cols=206 Identities=16% Similarity=0.090 Sum_probs=148.8
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhc-CCCC--CCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA-GSEF--LESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
..+.+.+.|..+.. .+-++.+..++...+.... +++. +.|....+....|+.+|+++... +.+|. +|
T Consensus 39 ~~~~~~vyld~~at--~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd------~~dIi--Ft 108 (428)
T KOG1549|consen 39 HHGTRPVYLDNQAT--GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD------PSDIV--FT 108 (428)
T ss_pred cCCCccEEEecCcC--CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC------CCcEE--Ee
Confidence 45667888888862 1111333334443333333 2222 23344455788999999999444 34688 99
Q ss_pred CCchhHHHHHHHHHHH-hCCCC----EEEEcCCCChhhHH---HHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCC
Q 013839 124 LSGTGACRLFAEFQRR-FHPES----HIYFPDPTWSNHHN---IWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDS 195 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~-~~~gd----~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 195 (435)
.|+|+++.++ +..+ +..+| +|++..-.|+.... .++..|++++++|. ++++..|.+++++.++ ++
T Consensus 109 s~ATEs~Nlv--l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv--~~~~~~d~~~~~~~i~---~~ 181 (428)
T KOG1549|consen 109 SGATESNNLV--LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPV--EDSGLVDISKLREAIR---SK 181 (428)
T ss_pred CCchHHHHHH--HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEecc--CccccccHHHHHHhcC---CC
Confidence 9999999999 5544 44667 89988877766644 45677899999998 3567899999999999 89
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc
Q 013839 196 SFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY 275 (435)
Q Consensus 196 ~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~ 275 (435)
|+++.+...+|-+|+.++.+ +|+++|+++++.+++|.+ +..+--+. ++..+ +-+++..|.+|.||.+
T Consensus 182 T~lv~I~~Vnn~~gv~~Pv~---EI~~icr~~~v~v~~DaA-QavG~i~v-----DV~el----n~D~~s~s~HK~ygp~ 248 (428)
T KOG1549|consen 182 TRLVSIMHVNNEIGVLQPVK---EIVKICREEGVQVHVDAA-QAVGKIPV-----DVQEL----NADFLSISAHKIYGPP 248 (428)
T ss_pred ceEEEEEecccCccccccHH---HHHHHhCcCCcEEEeehh-hhcCCccc-----cHHHc----CchheeeecccccCCC
Confidence 99999999999999999865 899999999999999999 44432211 23222 4467788999999999
Q ss_pred CCcccEEEE
Q 013839 276 GHRVGCLSI 284 (435)
Q Consensus 276 G~RvG~~~~ 284 (435)
| +|++.+
T Consensus 249 ~--iGaLYv 255 (428)
T KOG1549|consen 249 G--IGALYV 255 (428)
T ss_pred c--ceEEEE
Confidence 9 788863
No 281
>PRK02769 histidine decarboxylase; Provisional
Probab=99.64 E-value=2.1e-13 Score=131.49 Aligned_cols=291 Identities=16% Similarity=0.144 Sum_probs=181.2
Q ss_pred HHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCC
Q 013839 96 KMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDP 175 (435)
Q Consensus 96 ~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 175 (435)
+.++.+++.+ +.. ++++.+.+|+|||+++..+.....-+.++++|++++-.+......++..|.+...++..
T Consensus 69 ~~~~~~a~l~-g~~-----~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~-- 140 (380)
T PRK02769 69 DVMNFFAELF-KIP-----FNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL-- 140 (380)
T ss_pred HHHHHHHHHh-CCC-----CCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC--
Confidence 4445555555 322 23444558999999976553222224678999999988888888888899988888872
Q ss_pred CCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC---ceeeeeccCCCccCCCCcccHHHH
Q 013839 176 DSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKG---HFPFFDMAYQGFASGDLDKDAQAI 252 (435)
Q Consensus 176 ~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~---~~vi~Deay~~~~~~~~~~~~~~~ 252 (435)
+++.+|+++|++.+.+...++.+++++.++|+||.+-+. ++|.++|++|| +++.+|.++..+...-.+ ..+++
T Consensus 141 ~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi---~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~-~~~~~ 216 (380)
T PRK02769 141 PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNI---KEIQEILKKIGIDDYYIHADAALSGMILPFVN-NPPPF 216 (380)
T ss_pred CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCH---HHHHHHHHHhCCCceEEEEEecccceeecccC-ccccC
Confidence 357899999999998543458999999999999998765 58899999998 799999998665432110 00011
Q ss_pred HHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhh-------ccccCCChhHHHHHHHHhCCh
Q 013839 253 RIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIAR-------AMYGSPPVHGILLVATILSDP 325 (435)
Q Consensus 253 ~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~q~~~~~~l~~~ 325 (435)
.+ ...-+.+..|.+|.++.| ..+|.+.+ .++ ....+..... ....+.+.....++-.+|..-
T Consensus 217 -d~--~~~vDsis~s~HK~~~~P-~g~G~l~~---r~~----~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~l 285 (380)
T PRK02769 217 -SF--ADGIDSIAISGHKFIGSP-MPCGIVLA---KKK----YVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSL 285 (380)
T ss_pred -Cc--cCCCCEEEECCcccCCCC-CCcEEEEE---ehh----hhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHH
Confidence 11 113456778999998733 45787753 445 3333211000 111222223333333333321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCCC-cEEecc-
Q 013839 326 NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDG-RISMAG- 403 (435)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pgg-Ris~~~- 403 (435)
+ .+..++..++..+..+++.+.|++.|.+ ....|......|-..+.+ + .++..+...++. |+.+..
T Consensus 286 g-----~~G~~~~~~~~~~la~~l~~~L~~~g~~---~~~~p~~~~v~f~~~~~~-~---~~~w~l~~~~~~~hi~~~~~ 353 (380)
T PRK02769 286 G-----SKGLRQRVQHCLDMAQYAVDRLQANGIP---AWRNPNSITVVFPCPSER-I---WKKWHLATSGNQAHIITMPH 353 (380)
T ss_pred C-----HHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEcCCCceEEEEcCCCHH-H---HhCeeEcccCCEEEEEECCC
Confidence 1 1456777788888889999999887642 233454443444333332 2 233444444433 887644
Q ss_pred CCCCcHHHHHHHHHHHHH
Q 013839 404 VTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 404 ~~~e~i~~~~~~l~~~l~ 421 (435)
.+.+.++++++.|++.+.
T Consensus 354 ~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 354 HNKQQIDSLIDELIFDLK 371 (380)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 366778888888887765
No 282
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.64 E-value=9.6e-14 Score=126.93 Aligned_cols=329 Identities=17% Similarity=0.152 Sum_probs=199.4
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCccc----HHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVS----TKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
+++-=...+.|....+.|.+..++.+.+.+...+ ..+-....|. -.|.+.+|+.. +++ ..+ ++.+
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~G-AGGTRNIsG~s~~hv~LE~eLA~LH-qK~------aAL---lFsS 239 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAG-AGGTRNISGHSKHHVRLEAELADLH-QKE------AAL---LFSS 239 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHHHcCCC-cCCccccCCCCchhhhHHHHHHHHh-cCc------cee---eeee
Confidence 4555556666656655566666666666665433 2223333443 46667777765 332 122 2333
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC-CCCcEEEEeCCC
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA-PDSSFFLLHPSA 204 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~v~~~~p 204 (435)
.--|+...+-.++..-||.++.-...-+-....-++..+..-.-+. .+ |+++|++.+.+. +..+++|-+.+.
T Consensus 240 CfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFr---HN----D~~hL~~lL~~~~~svPKivAFEtV 312 (570)
T KOG1360|consen 240 CFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFR---HN----DLDHLEQLLQSSPKSVPKIVAFETV 312 (570)
T ss_pred eeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeec---cC----CHHHHHHHHHhCCCCCCceEEEeee
Confidence 3333333322334445888777666433333333444443322221 22 889999998765 356799999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhh-cCCeEEEEecccccccccCCcccEEE
Q 013839 205 HNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE-DEHLIGCAQSYAKSMGLYGHRVGCLS 283 (435)
Q Consensus 205 ~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g~~G~RvG~~~ 283 (435)
+.-+|.+-+ +++|++++++||++.++||++.--.|++-. -.+..-.+ ...-+|+.+++.|+||+-| ||+.
T Consensus 313 hSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rG---aGvgerdGvm~kvDiIsGTLgKafGcVG---GYIA 383 (570)
T KOG1360|consen 313 HSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRG---AGVGERDGVMHKVDIISGTLGKAFGCVG---GYIA 383 (570)
T ss_pred eccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCC---CCccccCCcchhhhhcccchhhhccccc---ceeh
Confidence 999998866 559999999999999999997655554210 11111111 1234688999999999988 9994
Q ss_pred EEecChhHHHHHHHHHHHHhhcc---ccCCChhHHHHHHH--HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 013839 284 ILCVDSKQAAAIRSQIQQIARAM---YGSPPVHGILLVAT--ILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGS 358 (435)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~q~~~~~--~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 358 (435)
. ..+ +++-++.+.-.. ++-+|....-++.+ .|+. ++-...|+..+++..++++.|.++|+
T Consensus 384 a---t~~----LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~--------~eg~~lR~~hqrnv~~~kq~l~~~Gi 448 (570)
T KOG1360|consen 384 A---TRK----LVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKS--------EEGRVLRRQHQRNVKYVKQLLMELGI 448 (570)
T ss_pred h---hhh----HHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhh--------hhhHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3 777 888888776432 23344333322221 2221 22356677788888999999999997
Q ss_pred CCCccccccCccee-EecCC---CHHHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHHHHh
Q 013839 359 SLNWEHITNQLGMF-CFSGL---TPYQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 359 ~~~~~~~~~~~g~~-~~~~~---~~~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~l~~ 422 (435)
| +++...-+. +.+|- ..+....|+.++||++..- | ||..+. .+++.++.++++|..++++
T Consensus 449 P----Vi~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~ 524 (570)
T KOG1360|consen 449 P----VIPNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNE 524 (570)
T ss_pred c----ccCCCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5 443333211 12232 3455677888999999743 4 666432 2677788899999888876
Q ss_pred hh
Q 013839 423 EQ 424 (435)
Q Consensus 423 ~~ 424 (435)
..
T Consensus 525 v~ 526 (570)
T KOG1360|consen 525 VG 526 (570)
T ss_pred cC
Confidence 54
No 283
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.63 E-value=3.3e-13 Score=119.77 Aligned_cols=269 Identities=12% Similarity=0.122 Sum_probs=179.3
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcC-CCCh-hhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEE
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPD-PTWS-NHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFL 199 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~-p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v 199 (435)
+...|+.+.+.+ +..++.|||.|++.. ..|+ -+.++.+.+|+++..++. ..+....+|++.+++.+ .+++++
T Consensus 73 isgsGh~g~E~a--l~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~--~~G~~~~le~i~~~lsq--h~p~~v 146 (385)
T KOG2862|consen 73 ISGSGHSGWEAA--LVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEA--DIGQAVPLEEITEKLSQ--HKPKAV 146 (385)
T ss_pred EecCCcchHHHH--HHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEec--CcccCccHHHHHHHHHh--cCCceE
Confidence 677788899888 888899999998776 4453 335688899999999976 55678899999999986 456888
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc-CCc
Q 013839 200 LHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY-GHR 278 (435)
Q Consensus 200 ~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~-G~R 278 (435)
++++....||+..+ -++.+-++|++|++++++|.+. .++-.+... |...-++......|+++.| |+
T Consensus 147 fv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~Va-Slggt~F~m---------DewgVDvaytgSQKaL~aP~GL- 213 (385)
T KOG2862|consen 147 FVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVA-SLGGTEFEM---------DEWGVDVAYTGSQKALGAPAGL- 213 (385)
T ss_pred EEEecCccccccch--HHHHHHHHhhcCCeEEEEechh-hcCCcccee---------hhhcccEEEecchhhcCCCCCc-
Confidence 88888888888654 3557778899999999999994 343332221 2222344455556888754 43
Q ss_pred ccEEEEEecChhHHHHHHHHHHHHhh-----------------------ccccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 013839 279 VGCLSILCVDSKQAAAIRSQIQQIAR-----------------------AMYGSPPVHGILLVATILSDPNLKSLWIDEV 335 (435)
Q Consensus 279 vG~~~~~~~~~~~~~~~~~~l~~~~~-----------------------~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~ 335 (435)
+-+ |.++. ...++++.+. .....+|....+.+.++|.. ..++.+
T Consensus 214 -sii---sfS~k----a~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~-----I~eeGL 280 (385)
T KOG2862|consen 214 -SII---SFSDK----ALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALAL-----IAEEGL 280 (385)
T ss_pred -cee---ecCHH----HHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHH-----HHHHHH
Confidence 334 44777 3333433221 11234555555666555543 245778
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCcccc----ccCcceeEecCCCHHHH-HHHhhhccEEEeCC-----C---cEEec
Q 013839 336 KIMADRIQRKRTTLRQNLEKLGSSLNWEHI----TNQLGMFCFSGLTPYQV-DRLAKEFHIYMTQD-----G---RISMA 402 (435)
Q Consensus 336 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~-~~ll~~~gI~i~pg-----g---Ris~~ 402 (435)
++.++++++..++++..|+.+|+....... +...+.-+-.+.|...+ ..+..++++.+..| | ||...
T Consensus 281 ~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~ 360 (385)
T KOG2862|consen 281 ENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLL 360 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEe
Confidence 999999999999999999999874322111 11112112226676555 66666667777655 2 99864
Q ss_pred c--CCCCcHHHHHHHHHHHHHh
Q 013839 403 G--VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 403 ~--~~~e~i~~~~~~l~~~l~~ 422 (435)
+ .+-+.++..++.|+..+.+
T Consensus 361 gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 361 GCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eccCCcHHHHHHHHHHHHHHhh
Confidence 3 3567788888888777654
No 284
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.63 E-value=4e-13 Score=129.14 Aligned_cols=340 Identities=14% Similarity=0.112 Sum_probs=205.7
Q ss_pred CCCCCeeeeecce--ecCCCCCcccchHHHHHHHHhc--CCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEe
Q 013839 47 DPSPYKINLGVGA--YRDDKGRPVVLQCVREAEAKIA--GSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQ 122 (435)
Q Consensus 47 ~~~~~~i~l~~g~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~ 122 (435)
.++...|||..|. . +. | -..+.+++++.+++. ......|......-++-|.+.+..-+.. .+.+. +
T Consensus 53 vdG~~ylDf~sgi~v~-~~-G-H~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~-----~~~~~--f 122 (447)
T COG0160 53 VDGNEYLDFLSGIAVL-NL-G-HNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSG-----LKKVF--F 122 (447)
T ss_pred CCCCEEEEcccCcchh-cc-C-CCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCccc-----CCeEE--e
Confidence 4678899998853 2 11 1 122334444444443 1112333333334456666666553322 34566 8
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH-Hhh--------C--C---CCeeeeeecCCC--CCCc------
Q 013839 123 ALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI-WRD--------A--Q---IPERTYHYYDPD--SKSL------ 180 (435)
Q Consensus 123 t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~-~~~--------~--g---~~~~~v~~~~~~--~~~~------ 180 (435)
+++|++|++++.++.........|+...-+|.+.... +.. . + ..+..+|..+.- .++.
T Consensus 123 ~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~ 202 (447)
T COG0160 123 GNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECG 202 (447)
T ss_pred cCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhh
Confidence 9999999999987777666668899999888665332 211 1 1 123444432111 1121
Q ss_pred --ChHhHHHHhhc---CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHH
Q 013839 181 --DFAALMDDIKN---APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRI 254 (435)
Q Consensus 181 --d~e~l~~~i~~---~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~ 254 (435)
..+.++..+.. .+.+..++++...+...|.+. +++.++++.++|++||+++|.||+..+++-.+ ..+.+..
T Consensus 203 ~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG---~~fa~E~ 279 (447)
T COG0160 203 DDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG---KMFAFEH 279 (447)
T ss_pred HHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---cchhhhh
Confidence 22334443332 245678999988899999877 55568999999999999999999999988775 3455544
Q ss_pred hhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHH
Q 013839 255 FLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDE 334 (435)
Q Consensus 255 ~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~ 334 (435)
+ +....+ -++||.+| .|+.+|.+++ .++ +.+ +..-....+++-++++..++.+.|+.-. +
T Consensus 280 ~-gv~PDi---vt~aK~ig-~G~Pl~avv~---r~e----i~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie------~- 339 (447)
T COG0160 280 F-GVEPDI---VTLAKSLG-GGLPLSAVVG---RAE----IMD-WPPGGHGGTFGGNPVACAAALAVLDVIE------E- 339 (447)
T ss_pred c-CCCCCE---EEeccccc-CCCceeEEec---cHH----hcc-cCCcccCCCCCcCHHHHHHHHHHHHHHH------H-
Confidence 4 221222 34899999 5999999974 777 666 3333334456777777777777765211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc--CcceeEecCC---------CH---HHH-HHHhhhccEEEeCCC--
Q 013839 335 VKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN--QLGMFCFSGL---------TP---YQV-DRLAKEFHIYMTQDG-- 397 (435)
Q Consensus 335 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~g~~~~~~~---------~~---~~~-~~ll~~~gI~i~pgg-- 397 (435)
+.+.++.++.-+++.+.|.++.-. ...+.. .-|+++-+.+ +. +.+ .++ .++|+.+..+|
T Consensus 340 -e~L~~~a~~~G~~l~~~L~~l~~~--~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~-~~~Glil~~~G~~ 415 (447)
T COG0160 340 -ENLLERAAELGEYLRDRLEELQEK--HPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARA-FERGLLLLTCGPH 415 (447)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhh--cCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHH-HHcCCEEeccCCC
Confidence 245566666667777777655311 112222 2234443322 21 233 444 56899888776
Q ss_pred ----cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 398 ----RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 398 ----Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
||... ..++++++++++.|.+++++.
T Consensus 416 ~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 416 GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 88742 248999999999999988753
No 285
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.63 E-value=3.1e-14 Score=125.17 Aligned_cols=325 Identities=16% Similarity=0.119 Sum_probs=187.5
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCccc----HHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVS----TKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
..+.+++|..++|.....+|.+...-..+.++...+.. +-.-..|. ..|...||++. ++ ++-+ +.
T Consensus 65 ~~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGls-svrfIcGtq~iHk~LE~kiAqfh-~r------ED~i---ly 133 (417)
T KOG1359|consen 65 SDKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLS-SVRFICGTQDIHKLLESKIAQFH-GR------EDTI---LY 133 (417)
T ss_pred cccceeeecccccccccCChHHHHHHHHHHHHhCCCcc-ceeEEecchHHHHHHHHHHHHHh-CC------CceE---Ee
Confidence 44789999999985554444444443444444332211 11112333 45555666665 33 3333 46
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC-CCCcEEEEeC
Q 013839 124 LSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA-PDSSFFLLHP 202 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~v~~~ 202 (435)
+++-.|+..+ +.+++.|.|.|.-...-+....+-++... .+ ...|+-+++..+.++ .-+-++|+..
T Consensus 134 pscfdANag~--feail~pedAvfSDeLNhASIIdGirLck----ry-------~h~dv~~l~~~l~~a~k~r~klv~TD 200 (417)
T KOG1359|consen 134 PSCFDANAGA--FEAILTPEDAVFSDELNHASIIDGIRLCK----RY-------RHVDVFDLEHCLISACKMRLKLVVTD 200 (417)
T ss_pred ccccccchHH--HHHhcChhhhhhccccccchhhhhhHHHh----hh-------ccchhHHHHHHHHHhhhheEEEEEec
Confidence 7777776555 77788898888777654444443333332 11 124566666555433 2344566653
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccc-ccCCcccE
Q 013839 203 SAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG-LYGHRVGC 281 (435)
Q Consensus 203 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g-~~G~RvG~ 281 (435)
..- .+..+...+++|++++++||+++++||++..+.++.- ....-..+.-.++-+++.++++|++| ..| ||
T Consensus 201 g~F---SMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~t--GrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gy 272 (417)
T KOG1359|consen 201 GVF---SMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGET--GRGTAEEFGVMGDVDIINSTLGKALGGASG---GY 272 (417)
T ss_pred cee---ccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCC--CCChHHHhCCCCcceehhhhhhhhhcCCCC---CC
Confidence 333 3344455677999999999999999999877766531 11122222234677899999999987 455 99
Q ss_pred EEEEecChhHHHHHHHHHHHHhhc-cccCCChhHH-HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 013839 282 LSILCVDSKQAAAIRSQIQQIARA-MYGSPPVHGI-LLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSS 359 (435)
Q Consensus 282 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~q-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 359 (435)
+.+ |.. +++.+++..++ .+++.-+++. -.++.++.-- -.-.....+.+.+.+.+++.++..|+
T Consensus 273 ttg---p~~----li~llrqr~RpylFSnslppavV~~a~ka~dll-------m~s~~~i~~~~a~~qrfr~~me~aGf- 337 (417)
T KOG1359|consen 273 TTG---PKP----LISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLL-------MVSSKEIQSRQANTQRFREFMEAAGF- 337 (417)
T ss_pred ccC---Chh----HHHHHHhcCCceeecCCCChhhhhhhHHHHHHH-------HhhHHHHHHHHHHHHHHHHHHHhcCc-
Confidence 964 888 88888887663 3333222221 1122222110 11234445666677788888877773
Q ss_pred CCccccccCcce-eEecCC---CHHHHHHHhhhccEEEeCC-------C----cEEecc-CCCCcHHHHHHHHHHHHHhh
Q 013839 360 LNWEHITNQLGM-FCFSGL---TPYQVDRLAKEFHIYMTQD-------G----RISMAG-VTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 360 ~~~~~~~~~~g~-~~~~~~---~~~~~~~ll~~~gI~i~pg-------g----Ris~~~-~~~e~i~~~~~~l~~~l~~~ 423 (435)
.+....-.+ -+.+|- .......||+ .||++... | |+.++. .++|+++++++++.++.+..
T Consensus 338 ---tIsg~~hPI~pv~lGda~lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 338 ---TISGASHPICPVMLGDARLASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred ---eecCCCCCccceecccHHHHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 333221111 122232 3345577765 79998632 3 555543 38999999999999987654
No 286
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.63 E-value=4.1e-13 Score=125.82 Aligned_cols=194 Identities=13% Similarity=0.105 Sum_probs=137.4
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh----hCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcE
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR----DAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSF 197 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 197 (435)
.+++|..|+..+ ++.++.+|++++..+..|.+...+++ ..|++...++. -|++++++.+. ++++
T Consensus 97 ~fsSGmaA~~~a--l~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~-------~~~~~~~~~i~---~~t~ 164 (409)
T KOG0053|consen 97 LFSSGMAAITVA--LLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV-------DDLKKILKAIK---ENTK 164 (409)
T ss_pred EecccHHHHHHH--HHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech-------hhHHHHHHhhc---cCce
Confidence 789999898888 78888999999999999988876655 56666666644 16778888887 6799
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCC
Q 013839 198 FLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGH 277 (435)
Q Consensus 198 ~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~ 277 (435)
+|++.+|.||+..+. |+++|.++|+++|++|++|+.+.....- ++.+ ..-+|++.|.+|.++-.+-
T Consensus 165 ~V~~ESPsNPll~v~---DI~~l~~la~~~g~~vvVDnTf~~p~~~----~pL~-------lGADIV~hSaTKyi~Ghsd 230 (409)
T KOG0053|consen 165 AVFLESPSNPLLKVP---DIEKLARLAHKYGFLVVVDNTFGSPYNQ----DPLP-------LGADIVVHSATKYIGGHSD 230 (409)
T ss_pred EEEEECCCCCccccc---cHHHHHHHHhhCCCEEEEeCCcCccccc----Chhh-------cCCCEEEEeeeeeecCCcc
Confidence 999999999998775 5669999999999999999997554321 1111 1358999999999974544
Q ss_pred cccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013839 278 RVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL 356 (435)
Q Consensus 278 RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 356 (435)
=+|-+++ .+..+ +.+.++..+.....+++++....+.+-+.. +.-..++..++...+.+.|+..
T Consensus 231 vi~G~iv-~n~~~----~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt----------l~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 231 VIGGSVV-LNSEE----LASRLKFLQEDLGWCEDPFDLFLLSRGLKT----------LHLRINKHSENALKIALLLEAH 294 (409)
T ss_pred eeeeEEe-cCcHH----HHHHHHHHHHHhcCCCCHHHHHHHhcCcch----------hhhhHHHHHHHHHHHHHHhhhC
Confidence 4554442 43477 888888887777677777655444444433 2223344444444455555544
No 287
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.63 E-value=4.8e-14 Score=135.87 Aligned_cols=280 Identities=14% Similarity=0.086 Sum_probs=167.9
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCC-chhHHHHHHHHHHHhC---CCCEEEEcCCCChhhHHHHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALS-GTGACRLFAEFQRRFH---PESHIYFPDPTWSNHHNIWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g-g~~a~~~~~~~~~~~~---~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 169 (435)
+.+.|+.+++++.... +++++ ++.| +|+|++.+ +..++. +||.|++ .|........++..|++++.
T Consensus 46 ~~~~r~~l~~l~~~~~-----~~~vv--f~~gs~T~a~~~~--~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~ 115 (355)
T cd00611 46 VNEAESDLRELLNIPD-----NYKVL--FLQGGATGQFAAV--PLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVI 115 (355)
T ss_pred HHHHHHHHHHHhCCCC-----CceEE--EEcCCchHHHHHH--HHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEE
Confidence 5678888998884322 45677 7877 99999999 666666 4455544 22222223366788999888
Q ss_pred eeecCCCCCCc-ChHh-HHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 170 YHYYDPDSKSL-DFAA-LMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 170 v~~~~~~~~~~-d~e~-l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
++. +++ +.. +..+ .+..+. +++++|.+++..|.||+.++ ++++.||+++++|.+ +.++..+.+
T Consensus 116 ~~~-~~~-g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~-qs~g~~~id- 180 (355)
T cd00611 116 VAA-KEE-GKYTKIPDVETWDLA---PDAAYVHYCSNETIHGVEFD--------EVPDTGGVPLVADMS-SNILSRPID- 180 (355)
T ss_pred Eec-ccc-cCCCCCCCHhhcCCC---CCCCEEEEeCCcccccEEcc--------eecccCCCeEEEEcc-ccccCCCCC-
Confidence 876 222 122 4222 223343 67899999999999999743 344569999999999 444432221
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHH------HHH-Hhh-ccccCCChhHHHHHH
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQ------IQQ-IAR-AMYGSPPVHGILLVA 319 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~------l~~-~~~-~~~~~~~~~~q~~~~ 319 (435)
+... + +.+.|..|.+|.+| +|.+++ +++..+++... ... ... ....+++....+++.
T Consensus 181 ----v~~~----~--~~~ss~~K~lGP~G--~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~ 245 (355)
T cd00611 181 ----VSKF----G--VIYAGAQKNLGPAG--VTVVIV---RKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMG 245 (355)
T ss_pred ----HHHh----C--EEEeecccccCCCc--eEEEEE---CHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHH
Confidence 1111 2 35566799999777 577754 77733322110 000 011 123456666666666
Q ss_pred HHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhh-CCCCCccccccCcce-eEec--CC--CHHHHHHHhhhccEE
Q 013839 320 TILSDPNLKSLWID-EVKIMADRIQRKRTTLRQNLEKL-GSSLNWEHITNQLGM-FCFS--GL--TPYQVDRLAKEFHIY 392 (435)
Q Consensus 320 ~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~g~-~~~~--~~--~~~~~~~ll~~~gI~ 392 (435)
++|+.-. .. .++.+.++.+++.+++++.|+++ |+...........+. ..+. +. +.+... .+.+.|+.
T Consensus 246 aal~~l~-----~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~-~~~r~G~~ 319 (355)
T cd00611 246 LVLKWLK-----EQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEFLK-EAEAAGMI 319 (355)
T ss_pred HHHHHHH-----HcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHHHH-HHHHCCCc
Confidence 6665321 13 37788899999999999999988 531010000012222 3222 32 222223 34568998
Q ss_pred EeCC----C--cEEeccC-CCCcHHHHHHHHHHH
Q 013839 393 MTQD----G--RISMAGV-TTGNVNYLANAIHEV 419 (435)
Q Consensus 393 i~pg----g--Ris~~~~-~~e~i~~~~~~l~~~ 419 (435)
+.++ | |+|++.. +.+|+++++++|+++
T Consensus 320 ~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 320 GLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 6555 3 9997543 789999999999875
No 288
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.62 E-value=3.2e-13 Score=132.66 Aligned_cols=341 Identities=12% Similarity=0.039 Sum_probs=189.0
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC-CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS-EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.++...+|+..|.-...-| -..+.+++++.+++... ....|.......++.+.+++...+. .+.+. ++++
T Consensus 72 ~dG~~ylD~~~g~~~~~lG-h~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~--f~~S 142 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFNVG-HRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGK------LKYSF--FCNS 142 (442)
T ss_pred CCCCEEEECCccHHhhhcC-CCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCC------cCEEE--EeCC
Confidence 4567888987772101111 12233444444444421 1122322222334444444443111 13566 8999
Q ss_pred chhHHHHHHHHHHHhC--CC-CEEEEcCCCChhhHHHHhhCCCCe----eeeeecCCCC--CCcChHhHHHHhhc---CC
Q 013839 126 GTGACRLFAEFQRRFH--PE-SHIYFPDPTWSNHHNIWRDAQIPE----RTYHYYDPDS--KSLDFAALMDDIKN---AP 193 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~----~~v~~~~~~~--~~~d~e~l~~~i~~---~~ 193 (435)
|++|++++..+..... .| .+|+....+|.+..........+. ...|+.+.-. -..|.+.+++.++. .+
T Consensus 143 GsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~ 222 (442)
T TIGR03372 143 GTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTG 222 (442)
T ss_pred chHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCC
Confidence 9999999986665543 23 678989988877654322221110 0111100000 01256777776642 33
Q ss_pred CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc
Q 013839 194 DSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 194 ~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 272 (435)
.+..++++.....-.|... +++.++++.++|++||+++|.||+..+|+..+ ..+....+ +.... |+ +++|.+
T Consensus 223 ~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~~-gv~PD-iv--t~gK~l 295 (442)
T TIGR03372 223 DDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG---KMFACEHE-GVQPD-IL--CLAKAL 295 (442)
T ss_pred CcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc---cchhhhhc-CCCCC-ee--eehhhh
Confidence 4577888877666677766 67789999999999999999999987775443 12233222 22122 22 489999
Q ss_pred cccC-CcccEEEEEecChhHHHHHHHHHHHH--hhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYG-HRVGCLSILCVDSKQAAAIRSQIQQI--ARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTL 349 (435)
Q Consensus 273 g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 349 (435)
| .| ..+|.+++ .++ +.+.+... ....+++.++++..++.+.|+.-. + +...++.++.-+++
T Consensus 296 g-~G~~Pigavv~---~~~----i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~------~--~~l~~~~~~~G~~l 359 (442)
T TIGR03372 296 G-GGVMPIGATIA---TEA----VFSVLFDNPFLHTTTFGGNPLACAAALATINELL------E--KNLPAQAAIKGDFL 359 (442)
T ss_pred c-CCcccceEEEe---cHH----HHHhhhccCccccCCCCCCHHHHHHHHHHHHHHH------h--ccHHHHHHHHHHHH
Confidence 8 67 57888863 677 66655321 123345556676666666664211 1 12344555666666
Q ss_pred HHHHHhhCC--CCCccccccCcceeEecCC--C--HHHHHHHhhhccEEEeCC---C---cEEec-cCCCCcHHHHHHHH
Q 013839 350 RQNLEKLGS--SLNWEHITNQLGMFCFSGL--T--PYQVDRLAKEFHIYMTQD---G---RISMA-GVTTGNVNYLANAI 416 (435)
Q Consensus 350 ~~~l~~~~~--~~~~~~~~~~~g~~~~~~~--~--~~~~~~ll~~~gI~i~pg---g---Ris~~-~~~~e~i~~~~~~l 416 (435)
.+.|+++.. +..+...... |.+.-+.+ + ...+...+.++||.+.+. + ||... ..+++++++++++|
T Consensus 360 ~~~L~~l~~~~~~~i~~vRG~-Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l 438 (442)
T TIGR03372 360 LDGFQQLAAEYPDLIIEARGK-GLLMAIEFRDNEIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAA 438 (442)
T ss_pred HHHHHHHHHhCCCceEEEecc-eEEEEEEeCChHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHH
Confidence 666665421 1011122233 44444433 1 233433345689999753 2 77653 24899999999999
Q ss_pred HHHH
Q 013839 417 HEVT 420 (435)
Q Consensus 417 ~~~l 420 (435)
.+.+
T Consensus 439 ~~~~ 442 (442)
T TIGR03372 439 KDAL 442 (442)
T ss_pred HHhC
Confidence 8753
No 289
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.62 E-value=1.7e-13 Score=135.75 Aligned_cols=267 Identities=18% Similarity=0.193 Sum_probs=158.6
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCC---CChhhHHHHhh---CCCCee----eeeecCCCCCCcChHhHHHHhhcC
Q 013839 123 ALSGTGACRLFAEFQRRFHPESHIYFPDP---TWSNHHNIWRD---AQIPER----TYHYYDPDSKSLDFAALMDDIKNA 192 (435)
Q Consensus 123 t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p---~y~~~~~~~~~---~g~~~~----~v~~~~~~~~~~d~e~l~~~i~~~ 192 (435)
..+|+.|+..+ +.++++|||+|+..+. ++..+...... .+.... ++.. +.+++.+|+++|++.+.+.
T Consensus 106 ~~SG~~AN~av--~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~-~~~~g~iD~d~Le~~l~~~ 182 (475)
T PLN03226 106 PLSGSPANFAV--YTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL-DESTGLIDYDKLEKKAMLF 182 (475)
T ss_pred cCchHHHHHHH--HHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee-cCCCCCcCHHHHHHHHhhc
Confidence 57888898877 8889999999998553 34443332211 111111 3343 3456789999999998743
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc
Q 013839 193 PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 193 ~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 272 (435)
+++++++.. ++ +|...+ +++|.++|+++|+++++|+++..-.... +....+ ....+++++|++|++
T Consensus 183 --~pklIv~~~-S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~-~~~~~p------~~~~Div~~t~hK~L 248 (475)
T PLN03226 183 --RPKLIIAGA-SA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAA-QEAASP------FEYCDVVTTTTHKSL 248 (475)
T ss_pred --CCeEEEEec-Cc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccC-CCCCCC------CCCCeEEEecCcccc
Confidence 456665532 22 555554 5588899999999999999853322211 100001 113568899999998
Q ss_pred -cccCCcccEEEEEecChhHHH----------HHHHHHHHHhhccc-cCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 013839 273 -GLYGHRVGCLSILCVDSKQAA----------AIRSQIQQIARAMY-GSPPVHGILLVATILSDPNLKSLWIDEVKIMAD 340 (435)
Q Consensus 273 -g~~G~RvG~~~~~~~~~~~~~----------~~~~~l~~~~~~~~-~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~ 340 (435)
|..| |++. + +++..+ ++...+.......+ .+++.....++..++..-. ....+++++
T Consensus 249 ~GP~G---g~I~--~-~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~-----~~~~~~~~~ 317 (475)
T PLN03226 249 RGPRG---GMIF--F-RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAM-----TPEFKAYQK 317 (475)
T ss_pred cCCCc---eEEE--E-chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHh-----CcCHHHHHH
Confidence 4444 7774 4 544110 12222221111112 2333333334444443210 122456788
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcccccc--CcceeEec-----CCCHHHHHHHhhhccEEEeCC------------C-cEE
Q 013839 341 RIQRKRTTLRQNLEKLGSSLNWEHITN--QLGMFCFS-----GLTPYQVDRLAKEFHIYMTQD------------G-RIS 400 (435)
Q Consensus 341 ~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~g~~~~~-----~~~~~~~~~ll~~~gI~i~pg------------g-Ris 400 (435)
+..++.++|.+.|.+.|+ .+..+ ... ..++ +++...+.+.|++.||.+..+ | |++
T Consensus 318 ~~~~na~~L~~~L~~~G~----~l~~~~t~~h-i~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiG 392 (475)
T PLN03226 318 QVKANAAALANRLMSKGY----KLVTGGTDNH-LVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIG 392 (475)
T ss_pred HHHHHHHHHHHHHHhCCC----EEEcCCCCCC-EEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccC
Confidence 899999999999988774 34332 122 2222 456677878888899988532 3 653
Q ss_pred -----eccCCCCcHHHHHHHHHHHHHh
Q 013839 401 -----MAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 401 -----~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
-.+.++++++++.+.|.++++.
T Consensus 393 t~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 393 TPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred cHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 2345789999999999998873
No 290
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.62 E-value=3.8e-13 Score=132.98 Aligned_cols=344 Identities=11% Similarity=0.028 Sum_probs=193.1
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC-CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE-FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
++...+|+..|.-...-| -..+++++++.+++.... ...|.......+|.+.+++...+. .+.+. ++++|
T Consensus 80 dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~--f~~SG 150 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVG-HRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGK------LKYSF--FCNSG 150 (459)
T ss_pred CCCEEEECCcCHHhhhcC-CCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCC------CCEEE--EeCCc
Confidence 567788887773101111 122334444444444221 111222222234444444443111 23566 89999
Q ss_pred hhHHHHHHHHHHHhCC--C-CEEEEcCCCChhhHHHHhh-CCCCeee---eeecCCCC--CCcChHhHHHHhhc---CCC
Q 013839 127 TGACRLFAEFQRRFHP--E-SHIYFPDPTWSNHHNIWRD-AQIPERT---YHYYDPDS--KSLDFAALMDDIKN---APD 194 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~--g-d~Vlv~~p~y~~~~~~~~~-~g~~~~~---v~~~~~~~--~~~d~e~l~~~i~~---~~~ 194 (435)
++|++.+..+...... | .+|+....+|.+....... .+-.... .|..+.-. --.|.+.+++.+.+ .+.
T Consensus 151 sEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 230 (459)
T PRK11522 151 TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGD 230 (459)
T ss_pred hHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCC
Confidence 9999999766655542 3 4688888888776543222 1211000 11100000 01267778877753 234
Q ss_pred CcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccc
Q 013839 195 SSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG 273 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g 273 (435)
+..++++.....-.|... +++.++++.++|++||+++|.||+..+|+..+ ..+....+ +... +| -+++|.+|
T Consensus 231 ~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~~-gv~P-Di--vt~gK~lg 303 (459)
T PRK11522 231 DVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG---KMFACEHE-NVQP-DI--LCLAKALG 303 (459)
T ss_pred cEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc---hhhhhhcc-CCCC-CE--EEechhhh
Confidence 567788777666677765 67789999999999999999999987765443 12232222 2222 22 27899998
Q ss_pred ccC-CcccEEEEEecChhHHHHHHHHHHH--HhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 274 LYG-HRVGCLSILCVDSKQAAAIRSQIQQ--IARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLR 350 (435)
Q Consensus 274 ~~G-~RvG~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 350 (435)
.| ..+|.+++ .++ +.+.+.. .....+++.++++..++.+.|+.-. + +...++.+++-++|.
T Consensus 304 -gG~~Pigav~~---~~~----i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~------~--~~l~~~~~~~g~~l~ 367 (459)
T PRK11522 304 -GGVMPIGATIA---TEE----VFSVLFDNPFLHTTTFGGNPLACAAALATINVLL------E--QNLPAQAEQKGDYLL 367 (459)
T ss_pred -CCCccceeEEE---cHH----HHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHh------c--chHHHHHHHHHHHHH
Confidence 67 57888864 667 6555432 1123344556666666666664211 1 234566777777777
Q ss_pred HHHHhhC--CCCCccccccCcceeEecCC-C---HHHHHHHhhhccEEEeCC---C---cEEec-cCCCCcHHHHHHHHH
Q 013839 351 QNLEKLG--SSLNWEHITNQLGMFCFSGL-T---PYQVDRLAKEFHIYMTQD---G---RISMA-GVTTGNVNYLANAIH 417 (435)
Q Consensus 351 ~~l~~~~--~~~~~~~~~~~~g~~~~~~~-~---~~~~~~ll~~~gI~i~pg---g---Ris~~-~~~~e~i~~~~~~l~ 417 (435)
+.|+++. .+..+...... |.+.-+.+ + ...+...+.++||.+.+. + ||... ..+++++++++++|.
T Consensus 368 ~~L~~l~~~~~~~i~~VrG~-Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~ 446 (459)
T PRK11522 368 DGFRQLAREYPDLVQEARGK-GMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAAR 446 (459)
T ss_pred HHHHHHHHhCCCceeeEEec-eeEEEEEecCchHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHH
Confidence 7777653 11011122223 33443333 1 223433345689999765 2 66653 348999999999999
Q ss_pred HHHHhhh
Q 013839 418 EVTRSEQ 424 (435)
Q Consensus 418 ~~l~~~~ 424 (435)
++++++.
T Consensus 447 ~~l~~~~ 453 (459)
T PRK11522 447 KALAAMR 453 (459)
T ss_pred HHHHHHH
Confidence 9987655
No 291
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.62 E-value=9.2e-14 Score=133.69 Aligned_cols=286 Identities=13% Similarity=0.070 Sum_probs=178.3
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhh--HHHHhhCCCCeeeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNH--HNIWRDAQIPERTYH 171 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~ 171 (435)
+.+.++.+++++.... +.++. .++.+|+++++.+ +..++.+||++++..-+..+. ...++.+|.. ..+.
T Consensus 50 ~~~~~~~l~~l~~~~~-----~~~v~-~~~gsgt~~~Ea~--~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~ 120 (360)
T PRK05355 50 AEEAEADLRELLNIPD-----NYKVL-FLQGGASLQFAMV--PMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAA 120 (360)
T ss_pred HHHHHHHHHHHhCCCC-----CcEEE-EEcCCchHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEe
Confidence 4566667777663211 12343 2567789999988 888899999998877665444 4567788854 5554
Q ss_pred ecCCCCCCcChHhHHH-HhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHH
Q 013839 172 YYDPDSKSLDFAALMD-DIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQ 250 (435)
Q Consensus 172 ~~~~~~~~~d~e~l~~-~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~ 250 (435)
. +......+..++++ .++ +++++|.+++..|.||+..+ ++++| +|+++|+|.+ +.++..+.
T Consensus 121 ~-~~~~g~~~~~~~~~~~l~---~~~~~V~~th~eTstGv~~~--~i~~i------~g~l~vVDav-ss~g~~~i----- 182 (360)
T PRK05355 121 S-SEDDGFTYIPPLDEWQLS---DDAAYVHYTSNETIDGTEFH--ELPDT------GDVPLVADMS-SDILSRPI----- 182 (360)
T ss_pred c-ccccCCCCCCChhhccCC---CCCCEEEEccCCCcceEecC--ccccc------CCCcEEEEcC-ccccCccC-----
Confidence 4 22123345555555 565 46789999999999999974 34454 8999999999 44443322
Q ss_pred HHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHH------HHH-Hh-hccccCCChhHHHHHHHHh
Q 013839 251 AIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQ------IQQ-IA-RAMYGSPPVHGILLVATIL 322 (435)
Q Consensus 251 ~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~------l~~-~~-~~~~~~~~~~~q~~~~~~l 322 (435)
++..+ + +++.|..|.+|.+| +|.+.+ +++.++++... +.. .. .....+++....+++.++|
T Consensus 183 dv~~~----d--~~~~ssqK~lgP~G--lg~l~~---s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL 251 (360)
T PRK05355 183 DVSKF----G--LIYAGAQKNIGPAG--LTIVIV---REDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVF 251 (360)
T ss_pred CHHHc----c--EEEEeccccccCCc--eEEEEE---CHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHH
Confidence 12111 2 88888899999777 466654 77744332110 000 01 1234567777777777777
Q ss_pred CChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc-ceeEec--CC-CHHHHHHHhhhccEEEeCC-
Q 013839 323 SDPNLKSLWID-EVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL-GMFCFS--GL-TPYQVDRLAKEFHIYMTQD- 396 (435)
Q Consensus 323 ~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~--~~-~~~~~~~ll~~~gI~i~pg- 396 (435)
+.-. .. .++.+.++.++..+++++.|+++++........... ....+. +. ..+.+...+.++|+.+.++
T Consensus 252 ~~i~-----~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~ 326 (360)
T PRK05355 252 KWLK-----EQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGH 326 (360)
T ss_pred HHHH-----HccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCC
Confidence 5321 23 478888999999999999999987411111000112 222222 21 2133323345689998665
Q ss_pred ---C--cEEeccC-CCCcHHHHHHHHHHHHHh
Q 013839 397 ---G--RISMAGV-TTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 397 ---g--Ris~~~~-~~e~i~~~~~~l~~~l~~ 422 (435)
| |+|+... +.+|++++++.|+++++.
T Consensus 327 ~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 327 RSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 3 9997543 789999999999998764
No 292
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.60 E-value=1.9e-12 Score=127.65 Aligned_cols=337 Identities=11% Similarity=0.032 Sum_probs=192.5
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..||+..|.-...-| ...+.+++++.+++.......+ +.....++.+.+++...+ .+++. ++++|
T Consensus 50 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~l~~~~p~-------~~~v~--f~~sG 118 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITG-HAHPHITKAITEAAENGVLYGT-PTELEIEFAKMLKEAIPS-------LEKVR--FVNSG 118 (428)
T ss_pred CCCCEEEEccccccccccC-CCCHHHHHHHHHHHHhCCccCC-CCHHHHHHHHHHHHhCCC-------CcEEE--EeCCH
Confidence 4678899997774211112 1223344555555543322222 222223444444443311 24677 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCCCCee--------eeeecCCCC----CCcChHhHHHHhhcCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQIPER--------TYHYYDPDS----KSLDFAALMDDIKNAP 193 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~--------~v~~~~~~~----~~~d~e~l~~~i~~~~ 193 (435)
++|++.+..+........+|+...-+|.+...... ..|.... .++.....+ --.|++.+++.+.+.+
T Consensus 119 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 198 (428)
T PRK12389 119 TEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWG 198 (428)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcC
Confidence 99999997666555444788888888877654322 2221110 000000000 0126888988887554
Q ss_pred CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc
Q 013839 194 DSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 194 ~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 272 (435)
.+..++++.....-.|... +++.+++|.++|++||+++|.||+..+|..+. ......+ +.... +-+++|.+
T Consensus 199 ~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~----~~a~~~~-gv~PD---ivt~gK~l 270 (428)
T PRK12389 199 DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMY----GGAQDLL-GVEPD---LTALGKII 270 (428)
T ss_pred CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCc----chhhHHh-CCCCC---eeeechhh
Confidence 5677888877777778765 67789999999999999999999988773321 1111111 22122 23689999
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHH---hhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQI---ARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTL 349 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 349 (435)
| .|+.+|.+++ +++ +.+.+... ....+.+.++++..++.+.|+.-. + +...++.+++.+++
T Consensus 271 g-gG~Pi~av~~---~~~----i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~------~--~~l~~~~~~~g~~l 334 (428)
T PRK12389 271 G-GGLPIGAYGG---RKD----IMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQ------Q--EGVYEKLDRLGAML 334 (428)
T ss_pred c-CCCceeEEeE---HHH----HHhhhccCCCcccccCCccCHHHHHHHHHHHHHHh------c--ccHHHHHHHHHHHH
Confidence 8 7888888854 777 76666421 112345566676666666654211 1 12444555566666
Q ss_pred HHHHHhh----CCCCCccccccCcceeEe-c-C--C---------C---HHHHHHHhhhccEEEeCCC----cEEeccCC
Q 013839 350 RQNLEKL----GSSLNWEHITNQLGMFCF-S-G--L---------T---PYQVDRLAKEFHIYMTQDG----RISMAGVT 405 (435)
Q Consensus 350 ~~~l~~~----~~~~~~~~~~~~~g~~~~-~-~--~---------~---~~~~~~ll~~~gI~i~pgg----Ris~~~~~ 405 (435)
.+.|+++ +.. ..+. ...|++.. + . . + ...+...+.++||.+.+.+ .+++. .+
T Consensus 335 ~~~L~~l~~~~~~~--~~v~-r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~l~-~t 410 (428)
T PRK12389 335 EEGILEAAEKHGIT--ITIN-RLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKYEAWFLTTA-HT 410 (428)
T ss_pred HHHHHHHHHhCCCC--EEEE-ecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCCCCeeecCC-CC
Confidence 6666543 321 1221 22333321 1 1 0 1 1234334456899998864 34432 48
Q ss_pred CCcHHHHHHHHHHHHHh
Q 013839 406 TGNVNYLANAIHEVTRS 422 (435)
Q Consensus 406 ~e~i~~~~~~l~~~l~~ 422 (435)
+++++++++++.+++++
T Consensus 411 ~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 411 EEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998864
No 293
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.60 E-value=5.6e-13 Score=127.60 Aligned_cols=281 Identities=15% Similarity=0.066 Sum_probs=175.0
Q ss_pred HHHHHHHHhHcCCCCccccCCCeeeEecCC-chhHHHHHHHHHHHhCCCCEEEEcCCCChhh--HHHHhhCCCCeeeeee
Q 013839 96 KMVEESVKLVYGKDSDVVKEGRSAGVQALS-GTGACRLFAEFQRRFHPESHIYFPDPTWSNH--HNIWRDAQIPERTYHY 172 (435)
Q Consensus 96 ~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g-g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~ 172 (435)
+.++.+.+++.... ..+++ ++.| ||+|++.+ +..++.+||++++..-+..+. ..+++.+|+ +..+..
T Consensus 41 ~~~~~l~~l~~~~~-----~~~v~--~~~gsgT~a~ea~--~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~ 110 (349)
T TIGR01364 41 EAESDLRELLNIPD-----NYEVL--FLQGGATGQFAAV--PLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVAS 110 (349)
T ss_pred HHHHHHHHHhCCCC-----CceEE--EEcCCchHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEec
Confidence 44555555553211 23455 6655 99999999 888888999998887666444 456778888 666554
Q ss_pred cC--CCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHH
Q 013839 173 YD--PDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQ 250 (435)
Q Consensus 173 ~~--~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~ 250 (435)
.+ ++...+|+++++ +. +++++|.+++..|.||+..+ ++++.+++++++|.+ +.++..+.+
T Consensus 111 ~~~~~~~~~~~~~~~~--~~---~~~~~v~~th~ETstGv~~~--------~l~~~~~~l~iVDav-ss~g~~~id---- 172 (349)
T TIGR01364 111 GKEGNYTKIPDPSTWE--IS---EDAAYVHYCANETIHGVEFR--------ELPDVKNAPLVADMS-SNILSRPID---- 172 (349)
T ss_pred cccCCCCCCCCHHhcC--CC---CCCCEEEEcCCCCcccEecc--------eecccCCCeEEEEcc-ccccCccCC----
Confidence 11 122245555444 22 46789999999999999764 556678999999999 444433221
Q ss_pred HHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHH------HHHHh--hccccCCChhHHHHHHHHh
Q 013839 251 AIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQ------IQQIA--RAMYGSPPVHGILLVATIL 322 (435)
Q Consensus 251 ~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~------l~~~~--~~~~~~~~~~~q~~~~~~l 322 (435)
+.. .+ +++.|..|.+|.+| +|.+.+ +++.++++... +.... .....+++....+++.++|
T Consensus 173 -~~~----~d--~~~~ssqK~lgP~G--lg~l~~---s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al 240 (349)
T TIGR01364 173 -VSK----FG--LIYAGAQKNIGPAG--LTVVIV---RKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVF 240 (349)
T ss_pred -HHH----cc--EEEEecccccCCCc--eEEEEE---CHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 211 12 88889999999887 566654 77744332110 01101 1223466777777777776
Q ss_pred CChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhC-CCCCccccccCc-ceeEec--CC--CHHHHHHHhhhccEEEeC
Q 013839 323 SDPNLKSLWID-EVKIMADRIQRKRTTLRQNLEKLG-SSLNWEHITNQL-GMFCFS--GL--TPYQVDRLAKEFHIYMTQ 395 (435)
Q Consensus 323 ~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~-g~~~~~--~~--~~~~~~~ll~~~gI~i~p 395 (435)
+.-. ++ .++.+.++.+++.+++++.|++++ +........... ....+. +. +.++.. .+.+.|+.+.+
T Consensus 241 ~~l~-----~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~-~~~~~Gi~~~~ 314 (349)
T TIGR01364 241 KWLK-----EQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLK-EAEERGLVSLK 314 (349)
T ss_pred HHHH-----HcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHH-HHHHCCCcccC
Confidence 5321 23 478889999999999999999985 311111000112 222222 22 223334 44678997766
Q ss_pred C----C--cEEeccC-CCCcHHHHHHHHHHHHHh
Q 013839 396 D----G--RISMAGV-TTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 396 g----g--Ris~~~~-~~e~i~~~~~~l~~~l~~ 422 (435)
+ | |+|+... +.||++.++++|++++++
T Consensus 315 ~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 315 GHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred CccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 6 3 9997543 789999999999987653
No 294
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=1.9e-12 Score=127.20 Aligned_cols=343 Identities=11% Similarity=0.031 Sum_probs=192.7
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC--CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE--FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.+++..+|+..|.-...-|.. .+++++++.+++.... ...+.......+|.+.+++... .. .+.+. +++
T Consensus 41 ~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p-~~-----~~~v~--f~~ 111 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHGYN-HPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILP-PS-----LNKIF--FAD 111 (429)
T ss_pred CCCCEEEEccchHHhccCCCC-CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCC-CC-----cCEEE--EeC
Confidence 357889999777421111111 2334444444443211 1111112223345555555431 11 24677 899
Q ss_pred CchhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHH-HhhCCC-------------CeeeeeecCCCCC-----C
Q 013839 125 SGTGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNI-WRDAQI-------------PERTYHYYDPDSK-----S 179 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~~~~~-----~ 179 (435)
+|++|++.+..+..... +| .+|+....+|.+.... +...|. .+..+|.. ...+ .
T Consensus 112 sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~ 190 (429)
T PRK06173 112 SGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQP-SIKFGEEWND 190 (429)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCC-CcccchhHHH
Confidence 99999999976555431 33 5788888888774221 111110 11122210 0000 1
Q ss_pred cChHhHHHHhhcCCCCcEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhh
Q 013839 180 LDFAALMDDIKNAPDSSFFLLHPSA-HNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE 257 (435)
Q Consensus 180 ~d~e~l~~~i~~~~~~~~~v~~~~p-~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~ 257 (435)
-+++.+++.+.+.+++..++++... +.-.|.. .+++.++++.++|++||+++|.||++.+++..+ ..+....+ +
T Consensus 191 ~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a~~~~-g 266 (429)
T PRK06173 191 EAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG---KLFALEHA-G 266 (429)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC---cchHHHhc-C
Confidence 1456677777654456788887663 6767776 588889999999999999999999987765443 12222222 2
Q ss_pred cCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHH-----hhccccCCChhHHHHHHHHhCChhhHHHH
Q 013839 258 DEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQI-----ARAMYGSPPVHGILLVATILSDPNLKSLW 331 (435)
Q Consensus 258 ~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~q~~~~~~l~~~~l~~~~ 331 (435)
... +|+ +++|.++ .| +.++-+++ +++ +.+.+... ....+.+.++++..++.+.|+.-
T Consensus 267 v~P-Div--~~gK~l~-gG~~p~~a~~~---~~~----i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i------ 329 (429)
T PRK06173 267 VVP-DIM--CIGKALT-GGYLTLSATIT---TEA----IAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLL------ 329 (429)
T ss_pred CCC-CEE--Eeehhhh-CCccccceEEe---cHH----HHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHH------
Confidence 222 233 3899997 66 35666653 677 66655421 11223345666666666665421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-CCCCCccccccCcceeEecCC----CHHHHHHHhhhccEEEeCCC---cEEec-
Q 013839 332 IDEVKIMADRIQRKRTTLRQNLEKL-GSSLNWEHITNQLGMFCFSGL----TPYQVDRLAKEFHIYMTQDG---RISMA- 402 (435)
Q Consensus 332 ~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~g~~~~~~~----~~~~~~~ll~~~gI~i~pgg---Ris~~- 402 (435)
++ ....++.+++.+.|.+.|+++ +.+ .+...... |...-+.+ ....+.+.+.++||.+.+.| ||...
T Consensus 330 ~~--~~~~~~~~~~g~~l~~~L~~~~~~~-~v~~vRg~-Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g~~l~~~Ppl 405 (429)
T PRK06173 330 LE--SPWQQNIQRIEAQLKQELAPAAEFD-SVAEVRVL-GAIGVVEMKEPVNMATLQPRFVEHGIWVRPFGKLVYIMPPF 405 (429)
T ss_pred Hh--CCHHHHHHHHHHHHHHHHHHhhcCC-Ceeeeecc-ceEEEEEeCCcccHHHHHHHHHHCCeEEEecCCEEEEeCCc
Confidence 01 134566677777777777754 221 11112222 33332222 23445444567899999887 77643
Q ss_pred cCCCCcHHHHHHHHHHHHHhhh
Q 013839 403 GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 403 ~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
..+++++++++++|.+++.+..
T Consensus 406 ~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 406 IISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred cCCHHHHHHHHHHHHHHHHHHh
Confidence 2489999999999999997644
No 295
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.60 E-value=6.6e-13 Score=130.24 Aligned_cols=345 Identities=10% Similarity=-0.004 Sum_probs=190.1
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..+|+..|.....-|.. .+++++++.+++......... .-..+....+++.+...... .-+.+. ++++|
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p~--~~~~v~--f~~SG 112 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHGYN-HPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTPQ--PLECVF--LADSG 112 (428)
T ss_pred CCCCEEEEcchhHHhhcCCCC-CHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCCC--CcCEEE--EeCCc
Confidence 467889999887421111222 233444444554421111000 00112334445554222111 024667 89999
Q ss_pred hhHHHHHHHHHHHh-----CCCCEEEEcCCCChhhHHHHhh-CCC-------------CeeeeeecCCC---CC-CcChH
Q 013839 127 TGACRLFAEFQRRF-----HPESHIYFPDPTWSNHHNIWRD-AQI-------------PERTYHYYDPD---SK-SLDFA 183 (435)
Q Consensus 127 ~~a~~~~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~---~~-~~d~e 183 (435)
++|++.+..+.... ....+|+....+|.+....... .+- .+..++..+.. .+ .-|++
T Consensus 113 sEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 192 (428)
T PRK07986 113 SVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIA 192 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHH
Confidence 99999997655544 1236899999888765422111 111 11122210000 00 12567
Q ss_pred hHHHHhhcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCe
Q 013839 184 ALMDDIKNAPDSSFFLLHPS-AHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHL 261 (435)
Q Consensus 184 ~l~~~i~~~~~~~~~v~~~~-p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 261 (435)
++++.+.+.+.+..+|++.. .+.-.|+. .+++.+++|.++|++||+++|+||+..+++..+. .+....+ +...
T Consensus 193 ~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~---~fa~~~~-gv~P- 267 (428)
T PRK07986 193 PFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGK---LFACEHA-GIAP- 267 (428)
T ss_pred HHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCC---eeeeccc-CCCC-
Confidence 78888865545667777755 25555664 4678899999999999999999999877654331 1111111 2112
Q ss_pred EEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHHh-----hccccCCChhHHHHHHHHhCChhhHHHHHHHH
Q 013839 262 IGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQIA-----RAMYGSPPVHGILLVATILSDPNLKSLWIDEV 335 (435)
Q Consensus 262 ~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~ 335 (435)
+|+ +++|.++ .| +.+|.+++ +++ +.+.+.... ...+.+.++++..++.+.|+.-. +
T Consensus 268 Di~--t~gK~l~-gG~~p~~av~~---~~~----i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~------~-- 329 (428)
T PRK07986 268 DIL--CLGKALT-GGTMTLSATLT---TRE----VAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLE------S-- 329 (428)
T ss_pred CEE--Eechhhh-CCcccCcchhc---hHH----HHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH------h--
Confidence 233 4899997 67 46776653 677 766665411 22344556666666666654211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC----CHHHHHHHhhhccEEEeCCC---cEEec-cCCCC
Q 013839 336 KIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL----TPYQVDRLAKEFHIYMTQDG---RISMA-GVTTG 407 (435)
Q Consensus 336 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~ll~~~gI~i~pgg---Ris~~-~~~~e 407 (435)
....++.+++.+++.+.|+++.....+...... |.+.-+.+ ....+...+.++||.+.+.| |+... ..+++
T Consensus 330 ~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~-Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g~~i~~~Ppl~it~~ 408 (428)
T PRK07986 330 GDWQQQVAAIEAQLREELAPLRDAPMVADVRVL-GAIGVVETTRPVNMAALQRFFVEQGVWIRPFGKLIYLMPPYIILPE 408 (428)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCEEeEecc-ceEEEEEeCCcccHHHHHHHHHHCCcEEEecCCEEEEeCCCCCCHH
Confidence 134556666667777777665210011122222 33332322 23345444467899999877 66532 34899
Q ss_pred cHHHHHHHHHHHHHh
Q 013839 408 NVNYLANAIHEVTRS 422 (435)
Q Consensus 408 ~i~~~~~~l~~~l~~ 422 (435)
++++++++|.++++.
T Consensus 409 ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 409 QLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999854
No 296
>PRK06062 hypothetical protein; Provisional
Probab=99.59 E-value=1.7e-12 Score=128.46 Aligned_cols=344 Identities=12% Similarity=0.034 Sum_probs=190.7
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCC--CCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEF--LESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.+++..||+..|.-...-|. ..+++++++.+++..... ..|. .....+|-+.+++...+ + -+++. +++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~~~~~~~-~~~~~~lae~L~~~~p~-~-----~~~v~--f~~ 119 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIGH-QHPKVVAAIQEQAARLCTVAPAHA-NDARSEAARLIAERAPG-D-----LSKVF--FTN 119 (451)
T ss_pred CCCCEEEEcccCHHhhcCCC-CCHHHHHHHHHHHHhcCCcCCccC-CHHHHHHHHHHHHhCCC-C-----CCEEE--EcC
Confidence 46788999988742111121 123444444455442211 1121 11123344444443311 1 24677 899
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCCC-----------CeeeeeecCCCC--CC--cC-------
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQI-----------PERTYHYYDPDS--KS--LD------- 181 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~-----------~~~~v~~~~~~~--~~--~d------- 181 (435)
+|++|.+.+..+........+|+...-+|.+...... ..+. .+..++..+... +. -|
T Consensus 120 SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 199 (451)
T PRK06062 120 GGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERA 199 (451)
T ss_pred ChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHH
Confidence 9999999997666555444788888888877743322 1111 111121100000 10 12
Q ss_pred hHhHHHHhhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcC
Q 013839 182 FAALMDDIKNA-PDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDE 259 (435)
Q Consensus 182 ~e~l~~~i~~~-~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 259 (435)
++.+++.+... +++..+|++.....-.|... +++.+++|.++|++||+++|.||+..+|+..+ ..+....+ +..
T Consensus 200 ~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~~~~-gv~ 275 (451)
T PRK06062 200 LAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG---KWFAIEHF-GVV 275 (451)
T ss_pred HHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCc---HHHHHHhc-CCC
Confidence 56777777543 24567777766666667765 77889999999999999999999988875443 12222222 222
Q ss_pred CeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHHH--hhccccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 013839 260 HLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQI--ARAMYGSPPVHGILLVATILSDPNLKSLWIDEVK 336 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~ 336 (435)
.. +.+++|.+| .|. .+|.+++ .++ +.+.+... ....+.+.++++..++.+.|+.-. + +
T Consensus 276 PD---i~t~gK~lg-gG~~Pigav~~---~~~----i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~------~--~ 336 (451)
T PRK06062 276 PD---LITFAKGVN-SGYVPLGGVAI---SEA----IAATFADRPYPGGLTYSGHPLACAAAVATINAME------E--E 336 (451)
T ss_pred CC---eeeechhhh-cCCcCcEEEEE---cHH----HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHH------h--c
Confidence 22 336899998 674 7888864 667 76666432 122355566676666666664211 1 1
Q ss_pred HHHHHHHHHH-HHHHHHHHhhCCC-CCccccccCcceeEecCC----------C--------HHHHHHHhhhccEEEeCC
Q 013839 337 IMADRIQRKR-TTLRQNLEKLGSS-LNWEHITNQLGMFCFSGL----------T--------PYQVDRLAKEFHIYMTQD 396 (435)
Q Consensus 337 ~~~~~~~~~~-~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~----------~--------~~~~~~ll~~~gI~i~pg 396 (435)
...++.++.- +++.+.|+++-.. ..+......|-++. +.+ + ...+...+.++||.+.+.
T Consensus 337 ~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~g-ve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~ 415 (451)
T PRK06062 337 GIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWA-LELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN 415 (451)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEE-EEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec
Confidence 2334444443 3555555543110 00112233333222 211 0 123433445689999865
Q ss_pred C---cEEec-cCCCCcHHHHHHHHHHHHHhhh
Q 013839 397 G---RISMA-GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 397 g---Ris~~-~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
+ ||+.. ..++++|++++++|.++++.+.
T Consensus 416 ~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 416 GNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 4 77653 3489999999999999997654
No 297
>PRK04311 selenocysteine synthase; Provisional
Probab=99.59 E-value=1.9e-12 Score=127.42 Aligned_cols=339 Identities=14% Similarity=0.096 Sum_probs=188.5
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCC-CCCCCCCC---cc--cHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS-EFLESISA---SV--STKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~---~g--~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
..+||.+--.+++..+....++.+.+++.....+ ....|.-. .| +..+++.+++++... ..+ ++
T Consensus 79 r~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae--------~a~--vv 148 (464)
T PRK04311 79 RPVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAE--------DAL--VV 148 (464)
T ss_pred cceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCC--------eEE--EE
Confidence 5677755443334344444444444444333322 12222211 12 357788888877322 233 68
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCChh------hHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcE
Q 013839 124 LSGTGACRLFAEFQRRFHPESHIYFPDPTWSN------HHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSF 197 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 197 (435)
++|+.|+.++ + ..+.+||+|++++..+.. ....++..|++++.++.. + ..++++++++++ ++|+
T Consensus 149 ~sgtaAl~l~--l-~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~--~t~~~dle~aI~---~~Tk 218 (464)
T PRK04311 149 NNNAAAVLLA--L-NALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--N--RTHLRDYEQAIN---ENTA 218 (464)
T ss_pred CCHHHHHHHH--H-HHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--C--CCCHHHHHHhcC---ccCe
Confidence 8899998777 4 346899999998764331 223567789999888652 1 357899999997 6789
Q ss_pred EEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeeeeccCCCcc----CCCCcccHHHHHHhhhcCCeEEEEeccccc
Q 013839 198 FLLHPSAHNPT--GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFA----SGDLDKDAQAIRIFLEDEHLIGCAQSYAKS 271 (435)
Q Consensus 198 ~v~~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 271 (435)
++++.+++||+ |.. ...++++|+++|++||+++|+|.+...+. ++ . ...+.+....+ .+-+++++|.+|.
T Consensus 219 lV~~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~g-l-~~~p~~~~~l~-~GaDiv~fSg~K~ 294 (464)
T PRK04311 219 LLLKVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYG-L-PDEPTVQELLA-AGVDLVTFSGDKL 294 (464)
T ss_pred EEEEEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhcc-C-CCCCchhhHHh-cCCcEEEecCccc
Confidence 99999999994 432 23468899999999999999999632221 11 0 00112222111 2457899999999
Q ss_pred ccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhC---Chh--hHHH-HHHHHHHHHHHHHHH
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILS---DPN--LKSL-WIDEVKIMADRIQRK 345 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~---~~~--l~~~-~~~~~~~~~~~~~~~ 345 (435)
+|-| ..|++++ +++ +++++++...............++.+.|. ++. +... -.+.+....++.+++
T Consensus 295 LgGp--~~G~i~g---~~~----li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~ 365 (464)
T PRK04311 295 LGGP--QAGIIVG---KKE----LIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRAR 365 (464)
T ss_pred ccCC--ceEEEEE---cHH----HHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHH
Confidence 8634 4788864 777 66666542211112222222223333332 110 0000 001233344667777
Q ss_pred HHHHHHHHHhhCCCC-Ccccccc----Ccc---------eeEec---CCCHHHHHHHhhhcc--EEEeCC-CcE--Eecc
Q 013839 346 RTTLRQNLEKLGSSL-NWEHITN----QLG---------MFCFS---GLTPYQVDRLAKEFH--IYMTQD-GRI--SMAG 403 (435)
Q Consensus 346 ~~~l~~~l~~~~~~~-~~~~~~~----~~g---------~~~~~---~~~~~~~~~ll~~~g--I~i~pg-gRi--s~~~ 403 (435)
.+.+.+.|+....+. ...+... .|| +-+-+ +++.+.+++.|++.. |..+-. +++ .+-.
T Consensus 366 A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~~~~~~ld~r~ 445 (464)
T PRK04311 366 AERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRIEDGRLLLDLRT 445 (464)
T ss_pred HHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEECCEEEEEeCc
Confidence 788888887653210 0122211 111 11111 335566666666644 444322 333 3334
Q ss_pred CCCCcHHHHHHHHHHHHH
Q 013839 404 VTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 404 ~~~e~i~~~~~~l~~~l~ 421 (435)
+.++|++.++++|++++.
T Consensus 446 ~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 446 LEEEDEERLAAALLEALN 463 (464)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 577889999999988753
No 298
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.59 E-value=1.4e-12 Score=128.01 Aligned_cols=340 Identities=12% Similarity=0.049 Sum_probs=187.6
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++...||+..|.-...-| ...+.+++++.+++.......+ +.....+|-+.+.+.+. .. .+.+. ++++|
T Consensus 50 ~dG~~yiD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~L~~~~~-~~-----~~~v~--f~~SG 119 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHG-HSHPKICDAIQQGAERGTSYGL-TSEQEILFAEELFSYLG-LE-----DHKIR--FVSSG 119 (433)
T ss_pred CCCCEEEEcccchhccccC-CCCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCC-CC-----cCEEE--EeCch
Confidence 4678899998775211112 1223344444444443222212 22223344555554431 11 23666 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH-H---hhCCCC---e-eee--eecCCCC---CCcChHhHHHHhhcCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI-W---RDAQIP---E-RTY--HYYDPDS---KSLDFAALMDDIKNAP 193 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~-~---~~~g~~---~-~~v--~~~~~~~---~~~d~e~l~~~i~~~~ 193 (435)
++|.+.+..+........+|+....+|.+.... + ...+-. . ..+ +...... .--|++.+++.+.+.+
T Consensus 120 sEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 199 (433)
T PRK00615 120 TEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLG 199 (433)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcC
Confidence 999999976655443346888888888775421 1 111100 0 000 0000000 0126788988887554
Q ss_pred CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc
Q 013839 194 DSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 194 ~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 272 (435)
++..+|++.....-.|... +++.+++|.++|++||+++|.||++.++..+. ......+ +... +++ +++|.+
T Consensus 200 ~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~----~ga~~~~-gv~P-Di~--~~gK~l 271 (433)
T PRK00615 200 HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQ----GGAAAIY-HVKP-DIT--VYGKIL 271 (433)
T ss_pred CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccH----hHHHHhc-CCCC-CeE--EEcccc
Confidence 5667777776666667765 57789999999999999999999987773221 1222222 2222 232 489999
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHHh---hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQIA---RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTL 349 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 349 (435)
| .|..+|.+++ +++ +++.+.... ...+.+.+++...++.+.|+.-. + ....++++++-+++
T Consensus 272 g-gG~p~~av~~---~~~----i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~------~--~~~~~~~~~~g~~l 335 (433)
T PRK00615 272 G-GGLPAAAVVA---HKS----IMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCR------E--QGFYTQLSTLEQNF 335 (433)
T ss_pred c-CCcceeeeee---cHH----HHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHh------c--ccHHHHHHHHHHHH
Confidence 8 6777888864 787 777664321 12234456666666655554211 1 12234444444444
Q ss_pred ----HHHHHhhCCCCCccccccCcceeEec--CC-----------CH---HHHHHHhhhccEEEeCCC--c--EEeccCC
Q 013839 350 ----RQNLEKLGSSLNWEHITNQLGMFCFS--GL-----------TP---YQVDRLAKEFHIYMTQDG--R--ISMAGVT 405 (435)
Q Consensus 350 ----~~~l~~~~~~~~~~~~~~~~g~~~~~--~~-----------~~---~~~~~ll~~~gI~i~pgg--R--is~~~~~ 405 (435)
.+.+.+.+.+ +.... .|.++.+. .- +. ..+...+.++||++.|.. . +|... +
T Consensus 336 ~~~l~~~~~~~g~~--v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~ls~~h-t 411 (433)
T PRK00615 336 LSPIEEMIRSQGFP--VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEASFLSSAH-S 411 (433)
T ss_pred HHHHHHHHHHcCCC--eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccccceecCC-C
Confidence 4444444432 22222 33333211 10 11 134333456899998864 3 55544 8
Q ss_pred CCcHHHHHHHHHHHHHhhh
Q 013839 406 TGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 406 ~e~i~~~~~~l~~~l~~~~ 424 (435)
+++|+++++++.++++...
T Consensus 412 ~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 412 MENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999987643
No 299
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.58 E-value=5.9e-14 Score=133.72 Aligned_cols=299 Identities=17% Similarity=0.177 Sum_probs=170.0
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCC-CCCCCC------CCcc---cHHHHHHHHHhHcCCCCccccCCCee
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS-EFLESI------SASV---STKMVEESVKLVYGKDSDVVKEGRSA 119 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~------~~~g---~~~lr~~ia~~l~~~~~~~~~~~~v~ 119 (435)
.+.|+|-..+ -..++.++++......+ ...+|+ ...- +..|.+..++.+++... .+..+
T Consensus 20 ~~~l~LiaSE-------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~----~~w~a 88 (399)
T PF00464_consen 20 RSTLNLIASE-------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEP----KEWYA 88 (399)
T ss_dssp HHSEE-CTT------------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-ST----TTEEE
T ss_pred hcCccccCcc-------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCc----ccceE
Confidence 4677887776 23455666655554421 122222 2221 34555555666677651 12233
Q ss_pred eEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH---HH-------hhCCCCeeeeeecCCCCCCcChHhHHHHh
Q 013839 120 GVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN---IW-------RDAQIPERTYHYYDPDSKSLDFAALMDDI 189 (435)
Q Consensus 120 ~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~---~~-------~~~g~~~~~v~~~~~~~~~~d~e~l~~~i 189 (435)
-+...+|+.|+..+ +.++++|||+|+..++..++|.. .. .....+.+.|++ +++++.+|.+++++.+
T Consensus 89 nvqp~SGs~An~av--~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~-d~~~~~ID~d~l~~~a 165 (399)
T PF00464_consen 89 NVQPHSGSQANLAV--YMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPV-DPDTGLIDYDELEKLA 165 (399)
T ss_dssp E---SSHHHHHHHH--HHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHHH
T ss_pred EeecCCchHHHHHH--HHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeee-ecCCCeECHHHHHHHH
Confidence 44688999998888 89999999999999877766632 11 112346778888 5667899999999998
Q ss_pred hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccC-CCccCCCCcccHHHHHHhhhcCCeEEEEecc
Q 013839 190 KNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAY-QGFASGDLDKDAQAIRIFLEDEHLIGCAQSY 268 (435)
Q Consensus 190 ~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 268 (435)
.+. ++++|++....+|- .-+++++.++|++.|++++.|.++ .++.-++.- +.++ ..-.++.+|.
T Consensus 166 ~~~--kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~--~~P~------~~ADvvt~sT 230 (399)
T PF00464_consen 166 KEH--KPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLF--PNPF------PYADVVTGST 230 (399)
T ss_dssp HHH----SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS----GC------CTSSEEEEES
T ss_pred hhc--CCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehhee--cCcc------ccceEEEeec
Confidence 763 56788875544443 346789999999999999999995 334433321 1121 1246889999
Q ss_pred cccccccCCcccEEEEEec-------------ChhHHHHHHHHHHHHhhccccCCChhHH-HHHHHHhCChhhHHHHHHH
Q 013839 269 AKSMGLYGHRVGCLSILCV-------------DSKQAAAIRSQIQQIARAMYGSPPVHGI-LLVATILSDPNLKSLWIDE 334 (435)
Q Consensus 269 SK~~g~~G~RvG~~~~~~~-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~q-~~~~~~l~~~~l~~~~~~~ 334 (435)
.|+| +|-|-|.+. ++ +++ +.+++.+...+...+.+.... .+.+.+|.+. ....
T Consensus 231 hKtl--~GPrggiI~--~~~~~~~~~~~~~~~~~~----l~~~I~~avfP~~qg~~h~~~iaalAval~ea-----~~~~ 297 (399)
T PF00464_consen 231 HKTL--RGPRGGIIL--TNKGSKNVDKKGKEIDEE----LAEKIDSAVFPGLQGGPHMHRIAALAVALKEA-----LSPE 297 (399)
T ss_dssp SGGG---SSS-EEEE--ES-SEEEE-TTS-EEEHH----HHHHHHHHHTTTT-SS--HHHHHHHHHHHHHH-----TSHH
T ss_pred cccc--cccCceEEE--EcCCccccCCcccccHHH----HHHHhccccCCCcccCcchhHHHHHHHHHhcc-----cCHH
Confidence 9997 788888874 63 266 888888766554433333322 3333333321 1133
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcce-eEec-----CCCHHHHHHHhhhccEEEe
Q 013839 335 VKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGM-FCFS-----GLTPYQVDRLAKEFHIYMT 394 (435)
Q Consensus 335 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~-~~~~-----~~~~~~~~~ll~~~gI~i~ 394 (435)
.+++.++..++.+.|.+.|.+.|+ ++.....-. .+|+ +++...+++.|++.||.+-
T Consensus 298 fk~Ya~qVv~NAk~La~~L~~~G~----~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vn 359 (399)
T PF00464_consen 298 FKEYAKQVVKNAKALAEALQERGF----KVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVN 359 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-----EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-E
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCc----EEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeec
Confidence 467788888899999999999885 444322222 3344 3466778888899999984
No 300
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=2.4e-12 Score=127.43 Aligned_cols=343 Identities=11% Similarity=0.042 Sum_probs=188.4
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC--CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS--EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.++...||+..|.....-| ...+++++++.+++... ....|.......+|-+.+++... .. .+.+. +++
T Consensus 50 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p-~~-----~~~v~--f~~ 120 (457)
T PRK05639 50 VDGNVFIDFLAGAAAASTG-YSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISP-IE-----NPKVL--FGL 120 (457)
T ss_pred CCCCEEEECCcCHHhhccC-CCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCC-CC-----cCEEE--EeC
Confidence 3678899998874211122 12233444444454421 11122222222345555554431 11 24677 899
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-hCC--------C-----CeeeeeecCCCC--CC----cCh--
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-DAQ--------I-----PERTYHYYDPDS--KS----LDF-- 182 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g--------~-----~~~~v~~~~~~~--~~----~d~-- 182 (435)
+|++|++.+..+........+|+....+|.+...... ..+ . .+..+|..+... +. -+.
T Consensus 121 SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 200 (457)
T PRK05639 121 SGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDE 200 (457)
T ss_pred chHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHH
Confidence 9999999997666555455788888888877543222 111 1 122233211100 00 022
Q ss_pred ------HhHHHHhhc---CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHH
Q 013839 183 ------AALMDDIKN---APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAI 252 (435)
Q Consensus 183 ------e~l~~~i~~---~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~ 252 (435)
+.+++.+.. .+++..++++...+...|... +++.+++|.++|++||+++|.||+..+|+..+ ..+..
T Consensus 201 ~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a~ 277 (457)
T PRK05639 201 LINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTG---KWFAS 277 (457)
T ss_pred HHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCc---hHHHH
Confidence 234444321 135678888877777778755 67889999999999999999999988775443 12222
Q ss_pred HHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHH
Q 013839 253 RIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWI 332 (435)
Q Consensus 253 ~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~ 332 (435)
..+ +...+ |++ ++|.++ .|..+|.+++ +++ +.+.... ....+.+.++++..++.+.|+.-.
T Consensus 278 ~~~-gv~PD-iv~--~gK~l~-gG~pi~av~~---~~~----i~~~~~~-~~~~T~~g~p~~~aaa~a~l~~l~------ 338 (457)
T PRK05639 278 EWF-EVKPD-LII--FGKGVA-SGMGLSGVIG---RKE----LMDLTSG-SALLTPAANPVISAAAEATLEIIE------ 338 (457)
T ss_pred Hhc-CCCCC-EEE--echhhc-CCCcceeEEe---hHH----HHhhcCC-CcccCCCcCHHHHHHHHHHHHHHH------
Confidence 222 22222 333 799998 6888888864 777 6552211 112344556665555555553211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC--CCCCccccccCcceeEecCC-------C---HHHHHHHhhhccEEEeCCC---
Q 013839 333 DEVKIMADRIQRKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGL-------T---PYQVDRLAKEFHIYMTQDG--- 397 (435)
Q Consensus 333 ~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~-------~---~~~~~~ll~~~gI~i~pgg--- 397 (435)
-+...++.+++-++|.+.|+++. .+ .+......|. +.-+.+ + ...+...+.++|+.+.+.|
T Consensus 339 --~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~VrG~Gl-~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~ 414 (457)
T PRK05639 339 --EENLLKNALKVGEFIKKRLLEMKESFE-VIGDVRGKGL-MIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMFG 414 (457)
T ss_pred --HccHHHHHHHHHHHHHHHHHHHHHhCC-CEEeecccee-EEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCC
Confidence 11233445555566666665531 11 0112233333 332211 1 1233333456899998743
Q ss_pred ---cEEec-cCCCCcHHHHHHHHHHHHHhhh
Q 013839 398 ---RISMA-GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 398 ---Ris~~-~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
|+... ..+++++++++++|.++++...
T Consensus 415 ~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 415 NVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred CEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 66643 3489999999999999987653
No 301
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.58 E-value=2.8e-12 Score=128.09 Aligned_cols=348 Identities=13% Similarity=0.078 Sum_probs=193.3
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..||+..|.-...-| --.+++++++.+++...... ..-..+..+....+++.+...... -..+.+. ++++|
T Consensus 86 ~dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~~-~~~~~~~~~~~~~lae~L~~~~~~-~~~~~v~--f~~SG 160 (504)
T PLN02760 86 INGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPFY-HSFWNRTTKPSLDLAKELLEMFTA-RKMGKVF--FTNSG 160 (504)
T ss_pred CCCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccce-ecccccCcHHHHHHHHHHHhhcCC-CCCCEEE--EeCCh
Confidence 3567889988864212122 22334455555555432111 000012234445555554222100 0023566 89999
Q ss_pred hhHHHHHHHHHHHh----C-CC-CEEEEcCCCChhhHHHH-hhCCCC------------eeeeeecCCCCCC--------
Q 013839 127 TGACRLFAEFQRRF----H-PE-SHIYFPDPTWSNHHNIW-RDAQIP------------ERTYHYYDPDSKS-------- 179 (435)
Q Consensus 127 ~~a~~~~~~~~~~~----~-~g-d~Vlv~~p~y~~~~~~~-~~~g~~------------~~~v~~~~~~~~~-------- 179 (435)
++|++.+..+.... . +| .+|+..+-+|.+..... ...|.. +..++. +..+.
T Consensus 161 sEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~ 238 (504)
T PLN02760 161 SEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDC--PHYWRFHLPGETE 238 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCC--CcccccCCCCCcH
Confidence 99999986554322 1 33 67888888887764322 212211 111111 00000
Q ss_pred -----cChHhHHHHhhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHH
Q 013839 180 -----LDFAALMDDIKN-APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAI 252 (435)
Q Consensus 180 -----~d~e~l~~~i~~-~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~ 252 (435)
...+++++.+.+ .+++..+|++.....-.|.+. +++.+++|.++|++||+++|.||+..+|+-.+. .+..
T Consensus 239 ~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~---~~a~ 315 (504)
T PLN02760 239 EEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT---MFGC 315 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch---hhHH
Confidence 112456666643 234577888876666667765 678899999999999999999999888865431 2232
Q ss_pred HHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHH-------hhccccCCChhHHHHHHHHhCC
Q 013839 253 RIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQI-------ARAMYGSPPVHGILLVATILSD 324 (435)
Q Consensus 253 ~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~ 324 (435)
..+ +.... +.+++|.+| .| ..+|.+++ +++ +.+.+... ....+.+.++++..++.+.|+.
T Consensus 316 e~~-gv~PD---ivtlgK~lg-gG~~PigAv~~---~~~----i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~ 383 (504)
T PLN02760 316 DKY-NIKPD---LVSLAKALS-SAYMPIGAVLV---SPE----ISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKI 383 (504)
T ss_pred Hhc-CCCCc---EEEeccccc-CCccccceEee---cHH----HHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHH
Confidence 222 22112 456899997 55 47888754 777 76666431 1233555677777776666642
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC-C--------------HHHHHHHhhhc
Q 013839 325 PNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL-T--------------PYQVDRLAKEF 389 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~-~--------------~~~~~~ll~~~ 389 (435)
-. + +...++.+++.++|++.|+++.-...+......|.++. +.+ + ...+...+.++
T Consensus 384 i~------~--~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~g-ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 454 (504)
T PLN02760 384 YK------E--RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILG-TEFVDNKSPNDPFPAEWGVGAYFGAECKKR 454 (504)
T ss_pred HH------h--CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEE-EEEecCCcccccccchhHHHHHHHHHHHhC
Confidence 11 1 13455566666666666665411001112233333332 211 0 12233334568
Q ss_pred cEEEeCCC---cEEec-cCCCCcHHHHHHHHHHHHHhhhh
Q 013839 390 HIYMTQDG---RISMA-GVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 390 gI~i~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
||.+.+.| ||+.. ..++++|++++++|.++++...+
T Consensus 455 Gvl~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~ 494 (504)
T PLN02760 455 GMLVRVAGDNIMMSPPLIITPEEVDELISIYGKALKATEE 494 (504)
T ss_pred CcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99998876 77743 24899999999999999977644
No 302
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.58 E-value=2.6e-12 Score=126.48 Aligned_cols=341 Identities=10% Similarity=-0.010 Sum_probs=190.2
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC--CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE--FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
++...+|+..|.....-| ...+++++++.+++.... ...+.......++-+.+++... .. -+.+. ++++
T Consensus 43 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~-----~~~v~--f~~s 113 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTP-NA-----LDCVF--LADS 113 (427)
T ss_pred CCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCC-CC-----CCEEE--EeCC
Confidence 567899998875111112 122334444444443211 1111112223455555555431 11 14666 8999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHHHhh-CCCC-------------eeeeeecCCCCCC-----c
Q 013839 126 GTGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNIWRD-AQIP-------------ERTYHYYDPDSKS-----L 180 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~~-~g~~-------------~~~v~~~~~~~~~-----~ 180 (435)
|++|++.+..+..... +| .+|+....+|.+....+.. .+.. ...++.. ...+. -
T Consensus 114 GseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~ 192 (427)
T TIGR00508 114 GSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEE 192 (427)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHH
Confidence 9999999875443321 23 6789999888776432221 1210 1111110 00011 1
Q ss_pred ChHhHHHHhhcCCCCcEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhc
Q 013839 181 DFAALMDDIKNAPDSSFFLLHPSA-HNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLED 258 (435)
Q Consensus 181 d~e~l~~~i~~~~~~~~~v~~~~p-~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 258 (435)
|++++++.+.+.+.+..+|++... ++-.|.. .+.+.+++|.++|++||+++|+||++.+++..+. .+....+ +.
T Consensus 193 ~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~---~~~~~~~-~v 268 (427)
T TIGR00508 193 AITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK---LFACEHA-GV 268 (427)
T ss_pred HHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc---cchhhhc-CC
Confidence 467777788654445667776653 5555654 4789999999999999999999999877655431 1122222 22
Q ss_pred CCeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHHHh-----hccccCCChhHHHHHHHHhCChhhHHHHH
Q 013839 259 EHLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQIA-----RAMYGSPPVHGILLVATILSDPNLKSLWI 332 (435)
Q Consensus 259 ~~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~q~~~~~~l~~~~l~~~~~ 332 (435)
... |+ +++|.++ .|+ -++.+++ +++ +.+.+.... ...+.+.++++..++.+.|+.-.
T Consensus 269 ~pD-i~--~~gK~l~-gG~~p~~a~~~---~~~----~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~------ 331 (427)
T TIGR00508 269 VPD-IL--CVGKALT-GGYMTLSATVT---TDK----VAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILL------ 331 (427)
T ss_pred CCC-EE--Eechhhh-cCcccceEEEE---cHH----HHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH------
Confidence 222 33 3799996 674 4565543 777 666665321 12233446666666666664210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC----CHHHHHHHhhhccEEEeCCC---cEEec-cC
Q 013839 333 DEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL----TPYQVDRLAKEFHIYMTQDG---RISMA-GV 404 (435)
Q Consensus 333 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~ll~~~gI~i~pgg---Ris~~-~~ 404 (435)
+ ....++.+++.++|.+.|++++....+......|. +.-+.+ ....+...+.++||.+.+.+ |++.. ..
T Consensus 332 ~--~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~-~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~~~l~~~ppl~~ 408 (427)
T TIGR00508 332 E--GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGA-IGVVEMYKPVNVEELQKKFVEQGVWIRPFGKLIYVMPPYII 408 (427)
T ss_pred h--CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEecccc-EEEEEECCccCHHHHHHHHHHCCeEEEecCCEEEEECCCCC
Confidence 1 13456777777788888877642101111112232 222221 23444444456899998876 77653 24
Q ss_pred CCCcHHHHHHHHHHHHHh
Q 013839 405 TTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 405 ~~e~i~~~~~~l~~~l~~ 422 (435)
++++|++++++|.+++.+
T Consensus 409 t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 409 TTEQLQKLTAALIEALHE 426 (427)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 889999999999998864
No 303
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.58 E-value=1.3e-12 Score=127.73 Aligned_cols=281 Identities=14% Similarity=0.116 Sum_probs=175.2
Q ss_pred CCeeeEecCCchhHHHHHHHHHH-Hh-----CCC-----CEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHh
Q 013839 116 GRSAGVQALSGTGACRLFAEFQR-RF-----HPE-----SHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAA 184 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~-~~-----~~g-----d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~ 184 (435)
+++.+.+|+|||+|+.++..... .. ..| .+|++.+-.+..+...++..|+++..+|. +++++.+|+++
T Consensus 100 ~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~-d~~~~~vd~~~ 178 (431)
T TIGR01788 100 AEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPM-DPGRYVIDPEQ 178 (431)
T ss_pred CCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEec-CCCceeeCHHH
Confidence 35665568999999988742111 11 112 36888888888888888888999999988 34445799999
Q ss_pred HHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc------CceeeeeccCCCcc----CCCCcccHHHHHH
Q 013839 185 LMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVK------GHFPFFDMAYQGFA----SGDLDKDAQAIRI 254 (435)
Q Consensus 185 l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~------~~~vi~Deay~~~~----~~~~~~~~~~~~~ 254 (435)
|++++. +++.+|++...+|.||.+.+.+ +|.++|+++ ++++.+|.+|..+. .+. ....+
T Consensus 179 L~~~i~---~~t~lV~~t~g~t~tG~idpi~---~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~---~~~~~-- 247 (431)
T TIGR01788 179 VVEAVD---ENTIGVVCILGTTYTGEYEDVK---ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD---LEWDF-- 247 (431)
T ss_pred HHHHHh---hCCeEEEEEeCCCCCcccCCHH---HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC---chhhc--
Confidence 999998 6788999999999999987655 888899999 99999999987543 111 11111
Q ss_pred hhhcCCeEEEEecccccc-cccCCcccEEEEEecChhHHHHHHHHHHH---Hhhc----cccCCChhHHHHHHHHhCChh
Q 013839 255 FLEDEHLIGCAQSYAKSM-GLYGHRVGCLSILCVDSKQAAAIRSQIQQ---IARA----MYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 255 ~~~~~~~~i~~~s~SK~~-g~~G~RvG~~~~~~~~~~~~~~~~~~l~~---~~~~----~~~~~~~~~q~~~~~~l~~~~ 326 (435)
....-+.+..|.+|.+ +..| +|.+.+ .+++. +...+.. +... .....+..+-.++..++.
T Consensus 248 --~~~~~DSis~s~HK~~~~P~g--~G~l~~--r~~~~---l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~--- 315 (431)
T TIGR01788 248 --RLPRVKSINVSGHKYGLVYPG--VGWVIW--RDEEA---LPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYN--- 315 (431)
T ss_pred --CCCCceEEEECchhccCCCCC--cEEEEE--eChHH---cchhheecccccCCCCCCcceecCchHHHHHHHHHH---
Confidence 1223355778899986 6555 677753 24331 1122111 0000 011112211111211211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc--CcceeEec--C-----CCHHHHHHHhhhccEEE----
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN--QLGMFCFS--G-----LTPYQVDRLAKEFHIYM---- 393 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~g~~~~~--~-----~~~~~~~~ll~~~gI~i---- 393 (435)
+...=.+..++..++..++.+++.+.|++.+. +....+ ..+...|- + .+...+.+.|.+.|+.+
T Consensus 316 l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~---~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~ 392 (431)
T TIGR01788 316 FLRLGREGYRKIMQNSLDVARYLAEEIAKLGP---FEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYT 392 (431)
T ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCC---EEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCC
Confidence 00000145667778888888999999988763 454443 45544443 2 34445544556789864
Q ss_pred eCC---C----cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 394 TQD---G----RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 394 ~pg---g----Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
.|. | |+++. ..+.+.++++++.|++++..+
T Consensus 393 ~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 393 LPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 332 3 88763 336778899999999887654
No 304
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=4e-12 Score=125.98 Aligned_cols=340 Identities=10% Similarity=0.040 Sum_probs=186.7
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCC--CCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEF--LESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
++...||+..+.+.. -|. ..+.+++++.+++..... ..|. .....+|-+.+++...+ . .+.+. ++++
T Consensus 70 dG~~ylD~~g~~~~~-lGh-~~p~v~~Ai~~ql~~~~~~~~~~~-~~~~~~lae~L~~~~p~-~-----~~~v~--f~~s 138 (459)
T PRK06082 70 DGKKYMDFHGNNVHQ-LGY-GHPHVIEKVKEQMAKLPFSPRRFT-NETAIECAEKLTEIAGG-E-----LNRVL--FAPG 138 (459)
T ss_pred CCCEEEEcccHhhcc-cCC-CCHHHHHHHHHHHHhCCCccCccC-CHHHHHHHHHHHHhCCC-C-----CCEEE--ECCC
Confidence 567788876332211 121 223444444455432111 1122 22223444444444311 1 24666 8999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH-HHhhCCC------------CeeeeeecCCCC--CC-------cChH
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN-IWRDAQI------------PERTYHYYDPDS--KS-------LDFA 183 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~~--~~-------~d~e 183 (435)
|++|++.+..+........+|+....+|.+... .+...|. .+..+|..+... +. -+++
T Consensus 139 GseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (459)
T PRK06082 139 GTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYAD 218 (459)
T ss_pred cHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHH
Confidence 999999997665555444788888888876643 2222221 112222100000 00 0135
Q ss_pred hHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 184 ALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 184 ~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
.+++.+.+. ++..+|++....+..+...+++.+++|.++|++||+++|.||+..+|+..+ ..+....+ +....++
T Consensus 219 ~l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~fa~e~~-gv~PDiv 293 (459)
T PRK06082 219 YLEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG---EWFTHQAY-GIEPDIL 293 (459)
T ss_pred HHHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHhHhh-CCCCCEE
Confidence 577777643 456788877666654556788899999999999999999999988775543 12222222 2222233
Q ss_pred EEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 013839 264 CAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRI 342 (435)
Q Consensus 264 ~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~ 342 (435)
+++|.+| .| ..+|.+++ +++ +...+.......+.+.++++..++.+.|+.-. + +...++.
T Consensus 294 ---~~gKgl~-gG~~P~~av~~---~~~----i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~------~--~~l~~~~ 354 (459)
T PRK06082 294 ---CIGKGLG-GGLVPIAAMIT---KDK----YNTAAQISLGHYTHEKSPLGCAAALATIEVIE------Q--EGLLEKV 354 (459)
T ss_pred ---Eeccccc-CCCCcceEEEE---cHH----HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH------h--cCHHHHH
Confidence 3899998 66 48888864 665 54332210011355566776666666654211 1 1345566
Q ss_pred HHHHHHHHHHHHhhCCCC-CccccccCcceeEecCC---------C---HHHH-HHHhhhccEEEeCC-C---cEEec-c
Q 013839 343 QRKRTTLRQNLEKLGSSL-NWEHITNQLGMFCFSGL---------T---PYQV-DRLAKEFHIYMTQD-G---RISMA-G 403 (435)
Q Consensus 343 ~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~---------~---~~~~-~~ll~~~gI~i~pg-g---Ris~~-~ 403 (435)
+++-++|.+.|+++-... .+......|.++. +.+ + ...+ ..+ .++||.+.+. + |++.. .
T Consensus 355 ~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~-ve~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~~~~i~~~Ppl~ 432 (459)
T PRK06082 355 KADSQFMRERLLEMKAKYPLIGDVRGIGLLWG-VELVTDRHTKERAYDEAEAVLYRC-LNNGLSFKVSQGNVIQLSPPLI 432 (459)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeeeeeccceeE-EEEccCccccCccHHHHHHHHHHH-HhCCCEEEecCCCEEEEeCCCc
Confidence 666666666665541100 1122333443332 211 1 1223 444 4689999875 3 66642 2
Q ss_pred CCCCcHHHHHHHHHHHHHhhh
Q 013839 404 VTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 404 ~~~e~i~~~~~~l~~~l~~~~ 424 (435)
.++++++++++++.+++.++.
T Consensus 433 it~~eid~~~~~l~~~l~~~~ 453 (459)
T PRK06082 433 ITREELTQALAILEEAIAKIC 453 (459)
T ss_pred cCHHHHHHHHHHHHHHHHHHh
Confidence 489999999999999998763
No 305
>PRK05965 hypothetical protein; Provisional
Probab=99.58 E-value=5.1e-12 Score=125.34 Aligned_cols=345 Identities=12% Similarity=0.052 Sum_probs=193.4
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCC-C---CCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEe
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEF-L---ESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQ 122 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~ 122 (435)
.++...||+..|.....-|.. .+++++++.+++..... . .+.. ....+|-+.+++...+ + .+++. +
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~~~~~~~~-~~~~~lae~L~~~~p~-~-----~~~v~--f 112 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVGYG-QESIVEAAAEQMRELPYATGYFHFGS-EPAIRLAAKLAERAPG-S-----LNHVY--F 112 (459)
T ss_pred CCCCEEEECcccHHhccCCCC-CHHHHHHHHHHHHhcCCcccccccCC-HHHHHHHHHHHhhCCC-C-----cCEEE--E
Confidence 467889999877421112222 23444555555542210 1 1111 1112344444443211 1 24666 8
Q ss_pred cCCchhHHHHHHHHHHHh----C-CC-CEEEEcCCCChhhHHHHh-h---------CCC---CeeeeeecCCC--CCCcC
Q 013839 123 ALSGTGACRLFAEFQRRF----H-PE-SHIYFPDPTWSNHHNIWR-D---------AQI---PERTYHYYDPD--SKSLD 181 (435)
Q Consensus 123 t~gg~~a~~~~~~~~~~~----~-~g-d~Vlv~~p~y~~~~~~~~-~---------~g~---~~~~v~~~~~~--~~~~d 181 (435)
+++|++|++.+.++.... . +| .+|+....+|.+...... . .|. .+..++..... .+.-|
T Consensus 113 ~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (459)
T PRK05965 113 TLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDD 192 (459)
T ss_pred eCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCC
Confidence 999999999997665543 1 33 578989989877643211 1 110 11222211000 01122
Q ss_pred --------hHhHHHHhhcCC-CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHH
Q 013839 182 --------FAALMDDIKNAP-DSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQA 251 (435)
Q Consensus 182 --------~e~l~~~i~~~~-~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~ 251 (435)
++.+++.+.+.. ++..+|++...+...|+.. +++.++++.++|++||+++|.||+..+|+..+ ..+.
T Consensus 193 ~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG---~~~a 269 (459)
T PRK05965 193 PQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTG---PLFA 269 (459)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCc---hhhh
Confidence 256777776432 4678888877777777754 77889999999999999999999998886543 1223
Q ss_pred HHHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHH-------HhhccccCCChhHHHHHHHHhC
Q 013839 252 IRIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQ-------IARAMYGSPPVHGILLVATILS 323 (435)
Q Consensus 252 ~~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~~~~~~l~ 323 (435)
...+ +....++ +++|.++ .| ..+|.+++ +++ +.+.+.. .....+.+.++++..++.+.|+
T Consensus 270 ~~~~-gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~----i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 337 (459)
T PRK05965 270 CEAE-GVVPDLM---TVAKGLT-SGYVPMGAVLM---SDH----VYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLR 337 (459)
T ss_pred Hhhc-CCCCCeE---Eechhhc-cCCcceeEEEE---cHH----HHHHHhccccccccccccCCCCCCHHHHHHHHHHHH
Confidence 3222 2222233 3699998 78 48998864 777 6665542 1123355666777666666653
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC----------C-----HHHHHHHhhh
Q 013839 324 DPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL----------T-----PYQVDRLAKE 388 (435)
Q Consensus 324 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~----------~-----~~~~~~ll~~ 388 (435)
.-+ -+...++.++.-++|.+.|+++.-...+......|. +.-+.+ + ...+...+.+
T Consensus 338 ~l~--------~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl-~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~ 408 (459)
T PRK05965 338 LYH--------EGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGL-LGALELVADKATKTPFDAALDPADRIFDRAYA 408 (459)
T ss_pred HHH--------hccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecce-EEEEEEeccccccCCCCchhHHHHHHHHHHHh
Confidence 211 123444556666666666665421001112233333 222211 1 1233333456
Q ss_pred ccEEEeCCC----cEEec-cCCCCcHHHHHHHHHHHHHhhhh
Q 013839 389 FHIYMTQDG----RISMA-GVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 389 ~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
+||.+.+.| |+... ..+++++++++++|.++++++.+
T Consensus 409 ~Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 409 NGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred CCeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 899998865 55422 24899999999999999987643
No 306
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.57 E-value=3.8e-13 Score=130.72 Aligned_cols=282 Identities=13% Similarity=0.056 Sum_probs=170.8
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecC-CchhHHHHHHHHHHHhCC-CCEEEEcCCCChhh-HH-HHhhCCC-C
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL-SGTGACRLFAEFQRRFHP-ESHIYFPDPTWSNH-HN-IWRDAQI-P 166 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~-gg~~a~~~~~~~~~~~~~-gd~Vlv~~p~y~~~-~~-~~~~~g~-~ 166 (435)
.-+.+.|+.+++++.... +++|+ ++. +||++++.+ +..++.+ ++.|++ .-.|+.- .. ..+..|+ +
T Consensus 48 ~~~~~~r~~l~~l~~~~~-----~~~v~--~~~gs~T~~~~~~--~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~ 117 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPE-----GYEVG--IVPGSDTGAWEMA--LWSLLGARRVDHLA-WESFGSKWATDVVKQLKLED 117 (378)
T ss_pred HHHHHHHHHHHHHhCCCC-----CceEE--EECCchHHHHHHH--HHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCC
Confidence 345678888888874322 23566 665 899999998 6666764 455554 3344332 22 2356788 8
Q ss_pred eeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCc
Q 013839 167 ERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLD 246 (435)
Q Consensus 167 ~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~ 246 (435)
++.++. +++..+|+++ ++ . ++.|.+++.+|.||...+.+ +|++ +++|+++++|.+ +.++..+.+
T Consensus 118 v~~~~~--~~g~~~d~~~----i~---~-~~~V~~~h~~t~tG~~~pi~---~I~~--~~~g~~~vVDa~-qs~G~~pid 181 (378)
T PRK03080 118 PRVLEA--DYGSLPDLSA----VD---F-DRDVVFTWNGTTTGVRVPVA---RWIG--ADREGLTICDAT-SAAFALPLD 181 (378)
T ss_pred ceEecc--CCCCCCCHhh----cC---C-CCCEEEEecCCccceeccch---hhcc--ccCCCeEEEecc-cccccCCCC
Confidence 888875 3445667665 32 1 45688899999999999855 6666 788999999998 544433322
Q ss_pred ccHHHHHHhhhcCCeEEEEecccccccc-cCCcccEEEEEecChhHHHHHHHH------------------HHHHh-hcc
Q 013839 247 KDAQAIRIFLEDEHLIGCAQSYAKSMGL-YGHRVGCLSILCVDSKQAAAIRSQ------------------IQQIA-RAM 306 (435)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~~s~SK~~g~-~G~RvG~~~~~~~~~~~~~~~~~~------------------l~~~~-~~~ 306 (435)
+. +-++++.|..|.++. +| +|++.+ +++..+++... +.... ...
T Consensus 182 -----v~------~iD~~~~s~~K~l~~P~G--~g~l~v---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t 245 (378)
T PRK03080 182 -----WS------KLDVYTFSWQKVLGGEGG--HGMAIL---SPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQT 245 (378)
T ss_pred -----HH------HCcEEEEehhhhCCCCCc--eEEEEE---CHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCc
Confidence 11 126888899999853 56 577764 77733332210 00000 011
Q ss_pred ccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc--c--Cc-ceeEec--C--
Q 013839 307 YGSPPVHGILLVATILSDPNLKSLWID-EVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT--N--QL-GMFCFS--G-- 376 (435)
Q Consensus 307 ~~~~~~~~q~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~--~~-g~~~~~--~-- 376 (435)
...++.....++..+|+.- .+. .++...++.+++.+++++.|++++. +.... + .+ +...+. +
T Consensus 246 ~~tp~i~~i~~l~~al~~l-----~~~gG~e~i~~r~~~l~~~l~~~l~~~~~---~~~~~~~~~~~s~~i~~~~~~~~~ 317 (378)
T PRK03080 246 INTPSMLTVEDYLDQLDWA-----NSIGGLDALIARTAANASVLYDWAEKTPW---ATPLVADPATRSNTSVTLDFVDAQ 317 (378)
T ss_pred ccCchHHHHHHHHHHHHHH-----HHcCCHHHHHHHHHHHHHHHHHHHHhCCC---cccccCCccccCccEEEEEcCCch
Confidence 1223334444434444321 112 3677788899999999999988863 12221 1 12 233321 3
Q ss_pred --CCHHHHHHHhhhccEEEeCC------C--cEEecc-CCCCcHHHHHHHHHHHHHhhh
Q 013839 377 --LTPYQVDRLAKEFHIYMTQD------G--RISMAG-VTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 377 --~~~~~~~~ll~~~gI~i~pg------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~~ 424 (435)
.+.+.+..+++ +||.+..| + |+|+.. .+.+++++++++|++++++++
T Consensus 318 ~~~~~~~~~~l~~-~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 318 AAVDAAAVAKLLR-ENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred HHHHHHHHHHHHH-cCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 23345566654 58777643 2 999754 378999999999999887655
No 307
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=5e-12 Score=125.09 Aligned_cols=343 Identities=10% Similarity=-0.008 Sum_probs=192.8
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC---CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS---EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++...||+..|.-...-| -..+++++++.+++... ....+.. +....+++.+...-... .+.+. ++
T Consensus 51 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~~~~~~~~~~-----~~~~~lAe~L~~~~p~~--~~~v~--f~ 120 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFG-HANPRINAALKDQLDTLEHAMLAGCTH-----EPAIELAERLAALTGGT--LGHAF--FA 120 (453)
T ss_pred CCCCEEEEcchHHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccCC-----HHHHHHHHHHHHhCCCC--CCEEE--Ee
Confidence 3568899998774211112 12233444444444321 1111221 23334444442211110 13666 89
Q ss_pred CCchhHHHHHHHHHHHh-----CCC-CEEEEcCCCChhhHHHHh-hCCC------------CeeeeeecCCCC--CC---
Q 013839 124 LSGTGACRLFAEFQRRF-----HPE-SHIYFPDPTWSNHHNIWR-DAQI------------PERTYHYYDPDS--KS--- 179 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~-----~~g-d~Vlv~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~--~~--- 179 (435)
++|++|++.+..+.... .+| .+|+....+|.+.....- ..|- .+..++..+... ++
T Consensus 121 ~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 200 (453)
T PRK06943 121 SDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETA 200 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCH
Confidence 99999999997554322 123 678988888877642211 1110 122222211100 00
Q ss_pred -----cChHhHHHHhhcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHH
Q 013839 180 -----LDFAALMDDIKNAPDSSFFLLHPS-AHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAI 252 (435)
Q Consensus 180 -----~d~e~l~~~i~~~~~~~~~v~~~~-p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~ 252 (435)
-+++++++.+...+++..+|++.. .+...|.. .+++.++++.++|++||+++|.||+..+|+..+ ..+..
T Consensus 201 ~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG---~~fa~ 277 (453)
T PRK06943 201 ADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG---TFFAC 277 (453)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc---chhHH
Confidence 134677777765556677888766 36667774 578889999999999999999999998886543 12333
Q ss_pred HHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHH------hhccccCCChhHHHHHHHHhCCh
Q 013839 253 RIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQI------ARAMYGSPPVHGILLVATILSDP 325 (435)
Q Consensus 253 ~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~~~~~~l~~~ 325 (435)
..+ +....+++ ++|.++ .| ..+|.+++ .++ +.+.+..- ....+.+.+.++..++.+.|+.-
T Consensus 278 ~~~-gv~PDivt---~gKgl~-gG~~Pi~av~~---~~e----i~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i 345 (453)
T PRK06943 278 EQA-GVWPDFLC---LSKGIS-GGYLPLSLVLS---RDA----IFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLF 345 (453)
T ss_pred HhC-CCCCCeEe---eehhhc-cCcccceEEEE---cHH----HHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHH
Confidence 333 22223333 599998 78 48888864 777 66655421 12334556677766666666421
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC----C-----HHHHHHHhhhccEEEeCC
Q 013839 326 NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL----T-----PYQVDRLAKEFHIYMTQD 396 (435)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~----~-----~~~~~~ll~~~gI~i~pg 396 (435)
. + +...++.++.-+++.+.|+++.-...+......|- +.-+.+ + ...+...+.++||.+.+.
T Consensus 346 ~------~--~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl-~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~ 416 (453)
T PRK06943 346 A------E--DDVLARNARKSARLRAALAPLAAHPQVRHLRQRGT-IFAFDVALDGDAARTFSRRFFEAALERELLLRPI 416 (453)
T ss_pred H------h--cCHHHHHHHHHHHHHHHHHHHhcCCCEEeEecccc-EEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec
Confidence 1 1 12345555566666666665521111222333333 332222 1 123333345689999887
Q ss_pred C---cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 397 G---RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 397 g---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
| ||+.. ..+++++++++++|.+++++.
T Consensus 417 g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 417 GTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 6 77732 348999999999999999875
No 308
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=6.1e-12 Score=124.81 Aligned_cols=344 Identities=10% Similarity=0.036 Sum_probs=192.7
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC---CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS---EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++...+|+..|.....-|.. .+++++++.+++... ....|.. ....+|.+.+++.. ... .+.+. ++
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~l~~~~~~~~~~-~~~~~lae~L~~~~-p~~-----~~~v~--f~ 113 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVFGHA-NPRINQRIKDQVDQLEHVILAGFSH-EPVIELSERLVKIT-PPG-----LSRCF--YA 113 (466)
T ss_pred CCCCEEEEcchhHHhhcCCCC-CHHHHHHHHHHHHhcCCccccccCC-HHHHHHHHHHHHhC-CCC-----cCEEE--Ee
Confidence 366889999877421111212 233444444444321 1111221 11223444444432 111 24677 89
Q ss_pred CCchhHHHHHHHHHHHh----C-CC-CEEEEcCCCChhhHHHHhhC-CC------------CeeeeeecCCC--CCCc--
Q 013839 124 LSGTGACRLFAEFQRRF----H-PE-SHIYFPDPTWSNHHNIWRDA-QI------------PERTYHYYDPD--SKSL-- 180 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~----~-~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~--~~~~-- 180 (435)
++|++|++.+..+.... . +| .+|+...-+|.+........ |. .+..+|..+.. ..+.
T Consensus 114 ~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~ 193 (466)
T PRK07030 114 DNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSW 193 (466)
T ss_pred CCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCH
Confidence 99999999997655433 1 23 67888888887764332211 11 12222221000 0111
Q ss_pred ------ChHhHHHHhhcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHH
Q 013839 181 ------DFAALMDDIKNAPDSSFFLLHPS-AHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAI 252 (435)
Q Consensus 181 ------d~e~l~~~i~~~~~~~~~v~~~~-p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~ 252 (435)
+++.+++.+.+.+++..++++.. .+...|.. .+++.+++|.++|++||+++|.||+..+|+..+ ..+..
T Consensus 194 ~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG---~~~a~ 270 (466)
T PRK07030 194 EEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG---TMFAC 270 (466)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc---cchHH
Confidence 24566777765556677777765 35556764 467889999999999999999999998886543 12233
Q ss_pred HHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHH-------HhhccccCCChhHHHHHHHHhCC
Q 013839 253 RIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQ-------IARAMYGSPPVHGILLVATILSD 324 (435)
Q Consensus 253 ~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~~~~~~l~~ 324 (435)
..+ +....+++ ++|.++ .| +.+|.+++ +++ +.+.+.. .....+.+.++++..++.+.|+.
T Consensus 271 ~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~~---~~e----i~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~ 338 (466)
T PRK07030 271 EQA-GIRPDFLC---LSKALT-GGYLPLAAVLT---TDT----VYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDI 338 (466)
T ss_pred Hhc-CCCCCEEe---eehhcc-CCcccceEEEe---cHH----HHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 322 22223333 599998 78 48888864 777 6665532 11234556677777666666642
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC------------C---HHHHHHHhhhc
Q 013839 325 PNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL------------T---PYQVDRLAKEF 389 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~------------~---~~~~~~ll~~~ 389 (435)
-. + +...++.++.-+++.+.|+++.-...+...... |++.-+.+ + ...+...+.++
T Consensus 339 i~------~--~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 409 (466)
T PRK07030 339 FE------Q--DNVIENNRALARRMAEATAHLADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHALER 409 (466)
T ss_pred HH------h--cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHHHC
Confidence 11 1 234455666666666666654210012222333 33332222 0 01233333568
Q ss_pred cEEEeCCC---cEEec-cCCCCcHHHHHHHHHHHHHhhh
Q 013839 390 HIYMTQDG---RISMA-GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 390 gI~i~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
|+.+.+.| |+... ..+++++++++++|.++++++.
T Consensus 410 Gvl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 410 GALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred CeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 99998866 66532 3489999999999999998873
No 309
>PRK06105 aminotransferase; Provisional
Probab=99.56 E-value=5.5e-12 Score=125.15 Aligned_cols=348 Identities=11% Similarity=0.054 Sum_probs=193.1
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC-CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE-FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.++...||+..|.....-| --.+.+++++.+++.... .... .....+.+..+++.+...... .-+++. ++++
T Consensus 45 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~--~~~~v~--f~~S 117 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALG-FSEQRLVEAAARQMKKLPFYHTF--SHKSHGPVIDLAEKLVAMAPV--PMSKVF--FTNS 117 (460)
T ss_pred CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHHhCCCeecc--cccCCHHHHHHHHHHHHhCCC--CCCEEE--EeCC
Confidence 4678999998874211122 123344555555554321 0111 011123333444444221110 023666 8999
Q ss_pred chhHHHHHHHHHHHh----C-CC-CEEEEcCCCChhhHHHHhh-CCC------------CeeeeeecCCCCCC-------
Q 013839 126 GTGACRLFAEFQRRF----H-PE-SHIYFPDPTWSNHHNIWRD-AQI------------PERTYHYYDPDSKS------- 179 (435)
Q Consensus 126 g~~a~~~~~~~~~~~----~-~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~~------- 179 (435)
|++|++++.++.... . +| .+|+...-+|.+....... .+. .+..++..+...+.
T Consensus 118 GseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 197 (460)
T PRK06105 118 GSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEE 197 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChH
Confidence 999999997554322 1 23 5788888888766432211 110 11112210000000
Q ss_pred ----cChHhHHHHhhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHH
Q 013839 180 ----LDFAALMDDIKNA-PDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIR 253 (435)
Q Consensus 180 ----~d~e~l~~~i~~~-~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 253 (435)
.+.+++++.+.+. +++..+|++...+.-.|... +++.++++.++|++||+++|.||++.+|+-.+ ..+...
T Consensus 198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG---~~f~~~ 274 (460)
T PRK06105 198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG---NMFGCE 274 (460)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCc---hhhhHH
Confidence 0135677777432 34567888876666667764 78889999999999999999999988886543 122332
Q ss_pred HhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHHh-------hccccCCChhHHHHHHHHhCCh
Q 013839 254 IFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQIA-------RAMYGSPPVHGILLVATILSDP 325 (435)
Q Consensus 254 ~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~q~~~~~~l~~~ 325 (435)
.+ +.... +-+++|.++ .| ..+|.+++ +++ +.+.+.... ...+.+.++++..++.+.|+.-
T Consensus 275 ~~-~v~PD---i~~~gK~lg-gG~~P~~av~~---~~~----i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i 342 (460)
T PRK06105 275 TF-GIKPD---ILVMSKQLS-SSYQPLSAVLM---NEK----VYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAII 342 (460)
T ss_pred hc-CCCCC---eeeeecccc-cCcccceEEEE---cHH----HHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHH
Confidence 22 22222 336899998 55 57888864 777 666654311 1235566677766666666421
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC----------C-----HHHHHHHhhhcc
Q 013839 326 NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL----------T-----PYQVDRLAKEFH 390 (435)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~----------~-----~~~~~~ll~~~g 390 (435)
. + +...++.+++.++|.+.|+++.-...+......| ++.-+.+ + ...+...+.++|
T Consensus 343 ~------~--~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~G 413 (460)
T PRK06105 343 E------E--RDLVGNAAERGARLQARLRALADHPLVGEVRGVG-LIAAVELVADKATKTPFEPPGKVGARANAAAHEHG 413 (460)
T ss_pred H------h--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc-eEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCC
Confidence 1 1 2345566666666766666551100112223333 3322211 0 123433445789
Q ss_pred EEEeCCC---cEEec-cCCCCcHHHHHHHHHHHHHhhhh
Q 013839 391 IYMTQDG---RISMA-GVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 391 I~i~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
|.+.+.| |++.. ..+++++++++++|.++++++..
T Consensus 414 vl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 414 VISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred eEEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999876 77643 24899999999999999987653
No 310
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=7.3e-12 Score=124.30 Aligned_cols=345 Identities=12% Similarity=0.037 Sum_probs=193.5
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcC---CCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG---SEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++...||+..|.....-| -..+++++++.+++.. .....+ ......+|-+.+++.... . .+.+. ++
T Consensus 53 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~l~~~~~~~~-~~~~~~~lae~L~~~~p~-~-----~~~v~--f~ 122 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHG-HQVPELDEAIREQLNKIAHSTLLGL-ANVPSILLAEKLIEVVPE-G-----LKKVF--YS 122 (460)
T ss_pred CCCCEEEEcchhHHHhhcC-CCCHHHHHHHHHHHHhCCCcccccc-CCHHHHHHHHHHHHhCCC-C-----CCEEE--Ee
Confidence 3567888987764211112 1122334444444432 111112 122223455555544311 1 13666 89
Q ss_pred CCchhHHHHHHHHHHHh-----CCC-CEEEEcCCCChhhHHHHhh-CCC------------CeeeeeecCCC--CCC---
Q 013839 124 LSGTGACRLFAEFQRRF-----HPE-SHIYFPDPTWSNHHNIWRD-AQI------------PERTYHYYDPD--SKS--- 179 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~-----~~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~--~~~--- 179 (435)
++|++|++.+..+.... .+| .+|+....+|.+....... .|. ....+|..+.. .++
T Consensus 123 ~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~ 202 (460)
T PRK06916 123 DSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDK 202 (460)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCCh
Confidence 99999999997655443 233 6889899888776432221 111 11222221000 001
Q ss_pred -----cChHhHHHHhhcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHH
Q 013839 180 -----LDFAALMDDIKNAPDSSFFLLHPS-AHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAI 252 (435)
Q Consensus 180 -----~d~e~l~~~i~~~~~~~~~v~~~~-p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~ 252 (435)
-+++.+++.+...+++..+|++.. .+.-.|.. .+++.++++.++|++||+++|.||+..+|+..+ ..+..
T Consensus 203 ~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG---~~~a~ 279 (460)
T PRK06916 203 AEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG---KMFAC 279 (460)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc---hhhHH
Confidence 135667777765556677887765 46666776 488889999999999999999999988775443 12233
Q ss_pred HHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHH-------HhhccccCCChhHHHHHHHHhCC
Q 013839 253 RIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQ-------IARAMYGSPPVHGILLVATILSD 324 (435)
Q Consensus 253 ~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~~~~~~l~~ 324 (435)
..+ +....++ +++|.++ .| +.+|.+++ +++ +.+.+.. .....+.+.++++..++.+.|+.
T Consensus 280 ~~~-gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~e----i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~ 347 (460)
T PRK06916 280 EHE-NVTPDIM---TAGKGLT-GGYLPIAITVT---TDE----IYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLEL 347 (460)
T ss_pred Hhc-CCCCCee---eeehhhh-cCccccceeee---cHH----HHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHH
Confidence 222 2222232 4799998 77 58888864 777 6555432 11223455567766666666532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC------------C---HHHHHHHhhhc
Q 013839 325 PNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL------------T---PYQVDRLAKEF 389 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~------------~---~~~~~~ll~~~ 389 (435)
-. + +...++.+++-+++.+.|+++.-...+......|.++. +.+ + ...+...+.++
T Consensus 348 l~------~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~g-iel~~~~~~~~~~~~~~~~~~~i~~~~~~~ 418 (460)
T PRK06916 348 YE------K--TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVG-IELVKNKETKEPFEWTERVGVQVCKRSREL 418 (460)
T ss_pred HH------h--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceee-EEeecccccccCCCchhhHHHHHHHHHHHC
Confidence 11 1 23445566666667777765421001112333333322 211 0 12343344568
Q ss_pred cEEEeCCC---cEEe-ccCCCCcHHHHHHHHHHHHHhhhh
Q 013839 390 HIYMTQDG---RISM-AGVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 390 gI~i~pgg---Ris~-~~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
||.+.+.| |+.. ...+++++++++++|.++++++.+
T Consensus 419 Gvl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 419 GMLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred CeEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhhcc
Confidence 99999876 6653 234899999999999999986543
No 311
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.55 E-value=8.2e-12 Score=123.41 Aligned_cols=341 Identities=13% Similarity=0.047 Sum_probs=189.8
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcC---CCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG---SEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++...||+..|.-...-| ...+++++++.+++.. .....+.. ....+|.+.+++...+ . .+++. ++
T Consensus 46 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~l~~~~~~~~~~-~~~~~la~~L~~~~p~-~-----~~~v~--f~ 115 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNAG-HGRPEIVEAVARQAATLDYAPAFQMGH-PLAFELAERLAELAPG-G-----LDHVF--FT 115 (445)
T ss_pred CCCCEEEEccccHhhccCC-CCCHHHHHHHHHHHHhccCccccccCC-HHHHHHHHHHHHhCCC-C-----CCEEE--Ee
Confidence 3567899998774211112 1223344444444432 11111211 1122344444443311 1 23677 89
Q ss_pred CCchhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHHHhhC-C------------CCeeeeeecC-CC--CCCc-
Q 013839 124 LSGTGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNIWRDA-Q------------IPERTYHYYD-PD--SKSL- 180 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~-~~--~~~~- 180 (435)
++|++|++.+..+...+. ++ .+|+....+|.+........ | ..+..+|... .. .+..
T Consensus 116 ~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (445)
T PRK09221 116 NSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKG 195 (445)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCC
Confidence 999999999976555442 22 57888888887664321111 1 0122222210 00 0111
Q ss_pred -------ChHhHHHHhhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHH
Q 013839 181 -------DFAALMDDIKNA-PDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQA 251 (435)
Q Consensus 181 -------d~e~l~~~i~~~-~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~ 251 (435)
+.+++++.+... .++..+|++.......|... +.+.+++|.++|++||+++|.||+..+|+..+ ..+.
T Consensus 196 ~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~~ 272 (445)
T PRK09221 196 QPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLG---AAFA 272 (445)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCc---hhhH
Confidence 135677777643 24677888877777778765 66779999999999999999999987776443 1222
Q ss_pred HHHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHH-------HhhccccCCChhHHHHHHHHhC
Q 013839 252 IRIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQ-------IARAMYGSPPVHGILLVATILS 323 (435)
Q Consensus 252 ~~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~~~~~~l~ 323 (435)
...+ +.... +-+++|.++ .| ..+|.+++ +++ +.+.+.. .....+.+.++++..++.+.|+
T Consensus 273 ~~~~-gv~PD---i~~~gK~l~-gG~~Pi~av~~---~~~----i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~ 340 (445)
T PRK09221 273 AERF-GVTPD---IITFAKGLT-NGAIPMGAVIA---SDE----IYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLD 340 (445)
T ss_pred HHhc-CCCCC---EEEeccccc-cCcccceeeEE---cHH----HHHhhccCcccccccccccCCCcCHHHHHHHHHHHH
Confidence 2222 21112 346899997 45 56788753 777 6665532 1122345566666666655553
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCCccccccCcceeEecCC------C---HHHHHHHhhhccEEE
Q 013839 324 DPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG-SSLNWEHITNQLGMFCFSGL------T---PYQVDRLAKEFHIYM 393 (435)
Q Consensus 324 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~g~~~~~~~------~---~~~~~~ll~~~gI~i 393 (435)
.- .+ +...++.+++.+++++.|+++. .+ .+...... |++.-+.+ + ...+.+.+.++||.+
T Consensus 341 ~i------~~--~~l~~~~~~~g~~l~~~l~~l~~~~-~v~~vrg~-Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~ 410 (445)
T PRK09221 341 IY------RE--EDLFERAAELAPYFEDAVHSLKGLP-HVIDIRNI-GLVAGIELAPRPGAPGARGYEAFMKCFEKGLLV 410 (445)
T ss_pred HH------Hh--ccHHHHHHHHHHHHHHHHHhhccCC-CEEEEecC-ceEEEEEEecccccccchHHHHHHHHHHCCeEE
Confidence 21 11 2345677777788888887662 11 11222222 22222211 1 123333345689999
Q ss_pred eCCC---cEEec-cCCCCcHHHHHHHHHHHHHh
Q 013839 394 TQDG---RISMA-GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 394 ~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~ 422 (435)
.++| ||+.. ..+++++++++++|.+++.+
T Consensus 411 ~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 411 RYTGDTIALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred eecCCEEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 8876 77743 24899999999999999865
No 312
>PRK07482 hypothetical protein; Provisional
Probab=99.55 E-value=7.5e-12 Score=124.25 Aligned_cols=346 Identities=12% Similarity=0.024 Sum_probs=190.8
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC-CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE-FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.+++..||+..|.....-|.. .+++++++.+++.... ...+. ....+.+..+|+.+...-.. .-+++. ++++
T Consensus 47 ~dG~~ylD~~sg~~~~~lGh~-~p~v~~Av~~q~~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~--~~~~v~--f~~s 119 (461)
T PRK07482 47 AQGRRYIDAFAGLYCVNVGYG-RTEVAEAIAEQAKELAYYHTYV--GHGTEASITLSKRIIDRAPA--GMSKVY--YGLS 119 (461)
T ss_pred CCCCEEEEcccchhhhcCCCC-CHHHHHHHHHHHHhcCcccccc--ccCCHHHHHHHHHHHHhCCC--CcCEEE--EeCc
Confidence 467889999888532222222 3344555555554321 11110 01123444455554221100 024677 8999
Q ss_pred chhHHHHHHHHHHHh----C-CC-CEEEEcCCCChhhHHHHhh-C---------CC---CeeeeeecCCCC---CC----
Q 013839 126 GTGACRLFAEFQRRF----H-PE-SHIYFPDPTWSNHHNIWRD-A---------QI---PERTYHYYDPDS---KS---- 179 (435)
Q Consensus 126 g~~a~~~~~~~~~~~----~-~g-d~Vlv~~p~y~~~~~~~~~-~---------g~---~~~~v~~~~~~~---~~---- 179 (435)
|++|++.+.++.... . +| .+|+....+|.+....... . +. .+..++..+... .+
T Consensus 120 GSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 199 (461)
T PRK07482 120 GSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEE 199 (461)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHH
Confidence 999999997655433 1 22 5788888888775432111 1 10 111121100000 00
Q ss_pred ----cChHhHHHHhhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHH
Q 013839 180 ----LDFAALMDDIKN-APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIR 253 (435)
Q Consensus 180 ----~d~e~l~~~i~~-~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 253 (435)
.+++.+++.+.+ .+++..+|++...+...|... +++.+++|.++|++||+++|.||+..+|+..+ ..+...
T Consensus 200 ~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~~ 276 (461)
T PRK07482 200 QFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLG---SMFGSD 276 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc---chhhHH
Confidence 135677777753 235578888877666667774 67789999999999999999999998886543 122332
Q ss_pred HhhhcCCeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHHH-------hhccccCCChhHHHHHHHHhCCh
Q 013839 254 IFLEDEHLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQI-------ARAMYGSPPVHGILLVATILSDP 325 (435)
Q Consensus 254 ~~~~~~~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~~ 325 (435)
.+ +...++++ ++|.++ .|. .+|.+++ .++ +.+.+... ....+.+.++++..++.+.|+.-
T Consensus 277 ~~-gv~PDiv~---~gKgl~-gG~~Pi~av~~---~~~----i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~ 344 (461)
T PRK07482 277 HY-GIEPDLIT---VAKGLT-SAYAPLSGSIV---GEK----VWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDIL 344 (461)
T ss_pred hc-CCCCCEEE---Eccccc-cCccccceeee---cHH----HHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHH
Confidence 22 22223333 699997 674 7887754 667 65555421 12235567777777776666421
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CccccccCcceeEecCC----------C-----HHHHHHHhhhc
Q 013839 326 NLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSL-NWEHITNQLGMFCFSGL----------T-----PYQVDRLAKEF 389 (435)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~----------~-----~~~~~~ll~~~ 389 (435)
. + +...++.++.-+++.+.|+++-... .+......|. +.-+.+ + ...+...+.++
T Consensus 345 ~------~--~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl-m~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~ 415 (461)
T PRK07482 345 E------R--ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGM-LAAVEFVADRDDRTPFDPALKIGPQVSAAALER 415 (461)
T ss_pred H------h--CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecee-EEEEEeccCCCcCCCCChhhHHHHHHHHHHHHC
Confidence 1 1 1233445555556666665431100 1122333333 332211 1 12333334568
Q ss_pred cEEEeCC--C---cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 390 HIYMTQD--G---RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 390 gI~i~pg--g---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
||.+.+. | |+... ..+++++++++++|.++++++
T Consensus 416 Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 416 GVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred CcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9998653 4 66532 348999999999999999765
No 313
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.55 E-value=7.3e-12 Score=122.90 Aligned_cols=338 Identities=9% Similarity=0.029 Sum_probs=185.7
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCC--CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLES--ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.+++..+|+..|.....-| ...+++++++.+++.......+ .......+|.+.+++... .. -+.+. +++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p-~~-----~~~v~--f~~ 107 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAHG-HGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTD-NG-----LDHVF--YSD 107 (422)
T ss_pred CCCCEEEEcchhHHHhcCC-CCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCC-CC-----cCEEE--EeC
Confidence 4678899998875312122 1223444444455542211111 111122345555554431 11 24677 899
Q ss_pred CchhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHHHh-hCCC-------------CeeeeeecCCCCCCcC---
Q 013839 125 SGTGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNIWR-DAQI-------------PERTYHYYDPDSKSLD--- 181 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~~~~~~d--- 181 (435)
+|++|++.+..+..... +| .+|+....+|.+...... ..+- ....+|.. .....+
T Consensus 108 SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~ 185 (422)
T PRK05630 108 SGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAP--PVRGSSPQE 185 (422)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCC--cccCCChHH
Confidence 99999999976554432 23 578888888877543222 1110 11222221 101111
Q ss_pred ----hHhHHHHhhcCCCCcEEEEeCCC-CCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh
Q 013839 182 ----FAALMDDIKNAPDSSFFLLHPSA-HNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF 255 (435)
Q Consensus 182 ----~e~l~~~i~~~~~~~~~v~~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~ 255 (435)
.+.+++.+. ++..++++... +...|... +.+.+++|.++|++||+++|.||++.+++..+ ..+....+
T Consensus 186 ~~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG---~~~a~~~~ 259 (422)
T PRK05630 186 ISEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG---ELFATLAA 259 (422)
T ss_pred HHHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc---hhhHHHhc
Confidence 233444444 46777777653 66677754 67789999999999999999999987775443 12222222
Q ss_pred hhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHH------hhccccCCChhHHHHHHHHhCChhhH
Q 013839 256 LEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQI------ARAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 256 ~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
+....++ +++|.++ .| ..+|.+++ +++ +.+.+... ....+++.++++..++.+.|+.-.
T Consensus 260 -gv~PDi~---t~gK~l~-gG~~p~~av~~---~~~----i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~-- 325 (422)
T PRK05630 260 -GVTPDIM---CVGKALT-GGFMSFAATLC---TDK----VAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIE-- 325 (422)
T ss_pred -CCCCCee---eeechhh-cCccccceeec---cHH----HHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHH--
Confidence 2222222 6899986 56 46788863 777 66665421 112345566666666666554211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC----CHHHHHHHhhhccEEEeCCC---cEEe
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL----TPYQVDRLAKEFHIYMTQDG---RISM 401 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~ll~~~gI~i~pgg---Ris~ 401 (435)
+ ....++..++.+++.+.|+.+.....+...... |.+.-+.+ ....+...+.++||.+.+.| ||..
T Consensus 326 ----~--~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~-Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g~~l~~~P 398 (422)
T PRK05630 326 ----T--GMWRKQVKRIEAELIAGLSPLAHLPGVADVRVL-GAIGVVEMEQPVDMEEATQAAVDHGVWLRPFGRLVYVMP 398 (422)
T ss_pred ----h--CcHHHHHHHHHHHHHHHHHHhhcCCCeeeeecc-ccEEEEEECCcccHHHHHHHHHHCCeEEEecCCEEEEEC
Confidence 1 123345555556666666543210011222222 33333322 23344444456899998876 6654
Q ss_pred c-cCCCCcHHHHHHHHHHHHHh
Q 013839 402 A-GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 402 ~-~~~~e~i~~~~~~l~~~l~~ 422 (435)
. ..+++++++++++|.++++.
T Consensus 399 pL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 399 PYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CccCCHHHHHHHHHHHHHHHhc
Confidence 2 24899999999999998864
No 314
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.55 E-value=7.4e-13 Score=140.00 Aligned_cols=297 Identities=14% Similarity=0.088 Sum_probs=182.8
Q ss_pred ccHHHHHHHHHhHcCCCCccccCC-CeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhhHHH---HhhCCCCe
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEG-RSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNHHNI---WRDAQIPE 167 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~-~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~ 167 (435)
-+.+.|+.+++++.... ++ +|+ +|.|+|+|+.+++ ..+ +.+||+|++..-.|.+.... ++..|+++
T Consensus 79 ~~e~aR~~ia~~lga~~-----~~~~Vv--FtsnaT~alnlva--~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v 149 (805)
T PLN02724 79 TIESARQQVLEYFNAPP-----SDYACV--FTSGATAALKLVG--ETFPWSSESHFCYTLENHNSVLGIREYALEKGAAA 149 (805)
T ss_pred HHHHHHHHHHHHhCCCc-----cceEEE--EeCChHHHHHHHH--HHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeE
Confidence 35788999999984321 22 356 8999999999984 433 67999999977666544433 34568888
Q ss_pred eeeeecCC------CCCCcCh--HhHHHHhh----c---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc-----
Q 013839 168 RTYHYYDP------DSKSLDF--AALMDDIK----N---APDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVK----- 227 (435)
Q Consensus 168 ~~v~~~~~------~~~~~d~--e~l~~~i~----~---~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~----- 227 (435)
..++...+ ....+++ +.+++.++ . ..++++++.+++.+|-||..++.+.++++.+.++.+
T Consensus 150 ~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g 229 (805)
T PLN02724 150 IAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSG 229 (805)
T ss_pred EeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCc
Confidence 88876311 1122333 55665431 0 124568999999999999999987554444433332
Q ss_pred CceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccc-ccCCcccEEEEEecChhHHHHHHHHHHHHh---
Q 013839 228 GHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG-LYGHRVGCLSILCVDSKQAAAIRSQIQQIA--- 303 (435)
Q Consensus 228 ~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~--- 303 (435)
++++++|.+ +.....+. .+. ..+-++++.|+.|.+| ..| +|.+.+ .++ +.+.+....
T Consensus 230 ~~~v~vDaa-Q~~g~~pi-----Dv~----~~~~Dfl~~S~HK~~GgP~G--~G~L~v---r~~----~~~~l~p~~~GG 290 (805)
T PLN02724 230 RWMVLLDAA-KGCGTSPP-----DLS----RYPADFVVVSFYKIFGYPTG--LGALLV---RRD----AAKLLKKKYFGG 290 (805)
T ss_pred ceEEEeehh-hhcCCCCC-----Chh----hcCCCEEEEecceeccCCCC--ceEEEE---ehh----hhhhhcCCccCC
Confidence 368999998 44443322 121 1245788999999998 445 677764 555 433333210
Q ss_pred ---------------------hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC---
Q 013839 304 ---------------------RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSS--- 359 (435)
Q Consensus 304 ---------------------~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--- 359 (435)
+.-..+++..+..++.+++.-.. ....+++.++..+..+++.+.|+++.-.
T Consensus 291 g~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~-----~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~ 365 (805)
T PLN02724 291 GTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLN-----RLTISAIAMHTWALTHYVANSLRNLKHGNGA 365 (805)
T ss_pred CceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHH-----HhChHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 11122344444445555543211 1235677788888889999999877410
Q ss_pred CCccccc---------cCcceeEec--CC-----CHHHHHHHhhhccEEEeCC---------------------------
Q 013839 360 LNWEHIT---------NQLGMFCFS--GL-----TPYQVDRLAKEFHIYMTQD--------------------------- 396 (435)
Q Consensus 360 ~~~~~~~---------~~~g~~~~~--~~-----~~~~~~~ll~~~gI~i~pg--------------------------- 396 (435)
..+.++. .+++.+.|. +. ...++..++.++||.++.|
T Consensus 366 ~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~ 445 (805)
T PLN02724 366 PVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGH 445 (805)
T ss_pred eEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCC
Confidence 0133332 234555544 32 3556777777788888522
Q ss_pred --------------C--cEEeccC-CCCcHHHHHHHHHHHHHh
Q 013839 397 --------------G--RISMAGV-TTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 397 --------------g--Ris~~~~-~~e~i~~~~~~l~~~l~~ 422 (435)
| |+|++.. |.+|++++++.|++..-.
T Consensus 446 ~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 446 VCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVS 488 (805)
T ss_pred ccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhc
Confidence 3 8887644 789999999999997643
No 315
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.54 E-value=1.2e-11 Score=122.12 Aligned_cols=281 Identities=13% Similarity=0.020 Sum_probs=166.0
Q ss_pred CCeeeEecCCchhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHHHh-hC---------C---CCeeeeeecC--
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNIWR-DA---------Q---IPERTYHYYD-- 174 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~-~~---------g---~~~~~v~~~~-- 174 (435)
+.+. ++++|++|++.+.++..... +| .+|+....+|.+.....- .. + ..+..+|...
T Consensus 107 ~~v~--f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~ 184 (442)
T PRK13360 107 NHVF--FTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDL 184 (442)
T ss_pred CEEE--EeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchh
Confidence 3666 89999999999976555442 22 579989988877643211 11 1 1122222210
Q ss_pred CC-CCCc--------ChHhHHHHhhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCC
Q 013839 175 PD-SKSL--------DFAALMDDIKNA-PDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASG 243 (435)
Q Consensus 175 ~~-~~~~--------d~e~l~~~i~~~-~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~ 243 (435)
.. .+.. ..+.+++.+... +++..+|++.......|... +++.+++|.++|++||+++|.||+..+++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Grt 264 (442)
T PRK13360 185 ARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRL 264 (442)
T ss_pred hccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence 00 0111 145777777543 34567888777676677764 6778999999999999999999998777544
Q ss_pred CCcccHHHHHHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHH-------hhccccCCChhHH
Q 013839 244 DLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQI-------ARAMYGSPPVHGI 315 (435)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q 315 (435)
+. .+....+ +.... + -+++|.++ .| +.+|.+++ +++ +.+.+... ....+.+.++++.
T Consensus 265 G~---~~a~~~~-gv~PD-i--vt~gK~l~-gG~~P~gav~~---~~~----i~~~~~~~~~~~~~~~~~~T~~g~pl~~ 329 (442)
T PRK13360 265 GA---PFAAQYF-GVTPD-L--LTCAKGLT-NGAIPMGAVFV---SSE----IHDAFMQGPEAGIEFFHGYTYSGHPLAC 329 (442)
T ss_pred cc---chhhhhc-CCCCc-e--eeeeeccc-cCccceEEEEE---cHH----HHHHhhcCCccccccccCCCCCCCHHHH
Confidence 31 1222222 22112 2 37899997 45 67888753 777 66555321 1223455666766
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC-------C--H-HHHHHH
Q 013839 316 LLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL-------T--P-YQVDRL 385 (435)
Q Consensus 316 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~-------~--~-~~~~~l 385 (435)
.++.+.|+.- ++ +...++.+++.+++.+.|+++.....+...... |++.-+.+ . . +....+
T Consensus 330 aaa~a~L~~l------~~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l 400 (442)
T PRK13360 330 AAALATLDLY------ER--EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKC 400 (442)
T ss_pred HHHHHHHHHH------Hh--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeecc-ceEEEEEEecCCCCcchhHHHHHHHH
Confidence 6666666421 11 235566677777777777765310011112222 22221111 1 1 233444
Q ss_pred hhhccEEEeCCC---cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 386 AKEFHIYMTQDG---RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 386 l~~~gI~i~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
.++||.+.+.| ||+.. ..+++++++++++|.++++++
T Consensus 401 -~~~Gvl~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 401 -FEKGLMIRYTGDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred -HHCCcEEEecCCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 56899998876 78743 248999999999999998654
No 316
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.54 E-value=2.7e-12 Score=135.28 Aligned_cols=299 Identities=10% Similarity=0.026 Sum_probs=189.0
Q ss_pred CCCCCC---Cccc----HHHHHHHHHhHcCCCCccccCCCeeeEecCCch----hHHHHHHHHHHHhCC-CC----EEEE
Q 013839 85 FLESIS---ASVS----TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT----GACRLFAEFQRRFHP-ES----HIYF 148 (435)
Q Consensus 85 ~~~Y~~---~~g~----~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~----~a~~~~~~~~~~~~~-gd----~Vlv 148 (435)
.+-|.| .+|+ .++|+.+++++ +. +.|. ++.+++ .|+.++ +.+.+.+ || +|++
T Consensus 554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~-g~-------~~v~--f~pnaga~ge~a~~~v--i~~~~~~~Gd~~r~~vli 621 (993)
T PLN02414 554 IHPFAPVDQAQGYQEMFEDLGDLLCEIT-GF-------DSFS--LQPNAGAAGEYAGLMV--IRAYHLSRGDHHRNVCII 621 (993)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHh-CC-------CeEE--EcCCCcHHHHHHHHHH--HHHHHhccCCCCCCEEEe
Confidence 455666 3454 45666666665 33 3666 787777 677777 5555655 88 8999
Q ss_pred cCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 013839 149 PDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKG 228 (435)
Q Consensus 149 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 228 (435)
+...+......+.+.|++++.+++ + +++.+|+++|+++++.+.+++++|++.+|+|-+|... ++++|+++|+++|
T Consensus 622 ~~~aH~sn~a~a~~~G~~vv~v~~-d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~---~I~eI~~iah~~G 696 (993)
T PLN02414 622 PVSAHGTNPASAAMCGMKIVVVGT-D-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEE---GIDEICDIIHDNG 696 (993)
T ss_pred CCCcCccCHHHHHHCCCEEEEecc-C-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccc---hHHHHHHHHHHcC
Confidence 998887777777889999999998 3 4568999999999985434789999999999998864 4679999999999
Q ss_pred ceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccc----ccCCcccEEEEEecChhHHHHHHHHHHHHh-
Q 013839 229 HFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG----LYGHRVGCLSILCVDSKQAAAIRSQIQQIA- 303 (435)
Q Consensus 229 ~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g----~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~- 303 (435)
+++++|.+.. ....+. ..+...+-+++.+|..|.|+ ..|-.+|++.+ .+. +...+-...
T Consensus 697 alv~vDgAq~-~a~~~l--------~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~---~~~----L~p~lPg~~v 760 (993)
T PLN02414 697 GQVYMDGANM-NAQVGL--------TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KKH----LAPFLPSHPV 760 (993)
T ss_pred CEEEEEecCH-HhccCc--------CCccccCCCEEEecCCccCCcCcccCCCCeeeEEE---chh----hcccCCCCcc
Confidence 9999999942 121111 00122356788899999764 23455788853 555 333222100
Q ss_pred ----------hccccCC---ChhHH----HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Q 013839 304 ----------RAMYGSP---PVHGI----LLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT 366 (435)
Q Consensus 304 ----------~~~~~~~---~~~~q----~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 366 (435)
...+.+. ...+| .++..++..-+ .+.+++..+....+.+++.+.|++. .+ +.+..
T Consensus 761 ~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG-----~~Gl~~~a~~a~~nAnYl~~rL~~~-~~--~~~~~ 832 (993)
T PLN02414 761 VPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMG-----SEGLTDASKIAILNANYMAKRLEGH-YP--VLFRG 832 (993)
T ss_pred ccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHC-----HhHHHHHHHHHHHHHHHHHHHHHhh-CC--ccccC
Confidence 0111111 11111 12222332211 1557777888888999999999763 21 22322
Q ss_pred cCcce---eE--ec------CCCHHHH-HHHhhhccEEEe----CC--C-cEEeccC-CCCcHHHHHHHHHHHHHhhhh
Q 013839 367 NQLGM---FC--FS------GLTPYQV-DRLAKEFHIYMT----QD--G-RISMAGV-TTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 367 ~~~g~---~~--~~------~~~~~~~-~~ll~~~gI~i~----pg--g-Ris~~~~-~~e~i~~~~~~l~~~l~~~~~ 425 (435)
+.+.+ |+ +. +.+.+.+ .+|+ ++||... |. . |++..-. +.+++++++++|+++..+..+
T Consensus 833 ~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 833 KNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred CCCCeeeeEEEeccccccccCCCHHHHHHHHH-HcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 22221 11 11 1333444 6665 6888653 22 2 8876432 788999999999988877653
No 317
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.54 E-value=4e-12 Score=115.97 Aligned_cols=155 Identities=15% Similarity=0.054 Sum_probs=121.1
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH----HHhhCCCCeee
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN----IWRDAQIPERT 169 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 169 (435)
...|.+.|+..-.|. .++.+.+|+.|+..+ ++.++.+||+|+..+--|++... .++..|.++.+
T Consensus 64 ~~vlE~RiAaLEGG~----------aa~a~aSG~AA~~~a--i~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~f 131 (426)
T COG2873 64 TDVLEERIAALEGGV----------AALAVASGQAAITYA--ILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRF 131 (426)
T ss_pred HHHHHHHHHHhhcch----------hhhhhccchHHHHHH--HHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEE
Confidence 346666676664333 345689999998888 99999999999988877766544 45688999988
Q ss_pred eeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 170 YHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 170 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
++- .|++.++++++ ++||+|++..-.||.+.+++ +++|.++|++|++++|+|..+..-.
T Consensus 132 vd~-------~d~~~~~~aI~---~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpy-------- 190 (426)
T COG2873 132 VDP-------DDPENFEAAID---ENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPY-------- 190 (426)
T ss_pred eCC-------CCHHHHHHHhC---cccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcce--------
Confidence 843 37899999999 89999999999999998875 5599999999999999999853311
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEE
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
-++. -...-.|++.|.||..|-.|--+|-+++
T Consensus 191 -l~rP--~~hGADIVvHS~TK~igGhGt~iGG~iV 222 (426)
T COG2873 191 -LCRP--IEHGADIVVHSATKYIGGHGTAIGGVIV 222 (426)
T ss_pred -ecch--hhcCCCEEEEeecccccCCccccceEEE
Confidence 1111 1234578899999999888888888876
No 318
>PRK06917 hypothetical protein; Provisional
Probab=99.54 E-value=1.4e-11 Score=121.77 Aligned_cols=349 Identities=11% Similarity=0.006 Sum_probs=189.2
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..||+..|.....-| ...+++++++.+++... .+.+.... ..+....+++.+...-.. ..+.+. ++++|
T Consensus 28 ~dG~~ylD~~~g~~~~~lG-h~hp~v~~Ai~~ql~~~-~~~~~~~~-~~~~~~~lae~L~~~~p~--~~~~v~--f~~sG 100 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIG-HGVKEIADAIKEQAEEV-SFVYRSQF-TSEPAEKLAKKLSDLSPG--DLNWSF--FVNSG 100 (447)
T ss_pred CCCCEEEECchhHHhccCC-CCCHHHHHHHHHHHhhC-cCcccccc-CCHHHHHHHHHHHHhCCC--CCCEEE--EeCCh
Confidence 4668899998774211112 12334444444554422 11111101 113334444444221110 023566 89999
Q ss_pred hhHHHHHHHHHHHh-----CCC-CEEEEcCCCChhhHHHHh-hCCC------------CeeeeeecCCCC--CC------
Q 013839 127 TGACRLFAEFQRRF-----HPE-SHIYFPDPTWSNHHNIWR-DAQI------------PERTYHYYDPDS--KS------ 179 (435)
Q Consensus 127 ~~a~~~~~~~~~~~-----~~g-d~Vlv~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~~~--~~------ 179 (435)
++|++.+..+.... .+| .+|+....+|.+...... ..+. .+..++...... ++
T Consensus 101 sEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 180 (447)
T PRK06917 101 SEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTC 180 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHH
Confidence 99999997554332 133 679988888877654322 1111 011111100000 00
Q ss_pred --cChHhHHHHhhcCC-CCcEEEEeCCCCC-CCCC-CCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHH
Q 013839 180 --LDFAALMDDIKNAP-DSSFFLLHPSAHN-PTGV-DPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRI 254 (435)
Q Consensus 180 --~d~e~l~~~i~~~~-~~~~~v~~~~p~N-PtG~-~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~ 254 (435)
-+++.+++.+.+.. ++..++++..... --|+ ..+++.+++|.++|++||+++|.||+..+|+-.+ ..+....
T Consensus 181 ~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG---~~~a~~~ 257 (447)
T PRK06917 181 QLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG---AMFAMEH 257 (447)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc---chhhHHh
Confidence 12456677776442 3567777755443 3445 4578889999999999999999999988775433 1222222
Q ss_pred hhhcCCeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHHHh----hccccCCChhHHHHHHHHhCChhhHH
Q 013839 255 FLEDEHLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQIA----RAMYGSPPVHGILLVATILSDPNLKS 329 (435)
Q Consensus 255 ~~~~~~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~q~~~~~~l~~~~l~~ 329 (435)
+ +....+ -+++|.++ .|. .+|.+++ .++ +.+.+.... ...+.+.++++..++.+.|+.-.
T Consensus 258 ~-gv~PDi---~~~gK~l~-~G~~Pi~a~~~---~~~----i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~--- 322 (447)
T PRK06917 258 W-GVEPDI---MTLGKGLG-AGYTPIAATVV---SDR----VMEPILRGSRSIMSGHTLSANPLSAATALAVLEYME--- 322 (447)
T ss_pred c-CCCCCE---EEeeehhc-cCCcceEEEEE---cHH----HHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHH---
Confidence 2 222222 35799998 675 7888864 777 666654311 12355667777666666664211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CccccccCcceeEecCC------------C---HHHHHHHhhhccEEE
Q 013839 330 LWIDEVKIMADRIQRKRTTLRQNLEKLGSSL-NWEHITNQLGMFCFSGL------------T---PYQVDRLAKEFHIYM 393 (435)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~------------~---~~~~~~ll~~~gI~i 393 (435)
-+...++.+++-+.|.+.|+++.... .+......|.++. +.+ + ...+...+.++||.+
T Consensus 323 -----~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~ 396 (447)
T PRK06917 323 -----KHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIG-VEFVADKKTKQPFSKSQAVASELISVAAKNGLLL 396 (447)
T ss_pred -----HCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEE-EEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEE
Confidence 12344556666666666665542100 1122333333332 211 0 122333335689999
Q ss_pred eCC--------C---cEEec-cCCCCcHHHHHHHHHHHHHhhhhh
Q 013839 394 TQD--------G---RISMA-GVTTGNVNYLANAIHEVTRSEQET 426 (435)
Q Consensus 394 ~pg--------g---Ris~~-~~~~e~i~~~~~~l~~~l~~~~~~ 426 (435)
.+. | |++.. ..+++++++++++|.++++++.++
T Consensus 397 ~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~ 441 (447)
T PRK06917 397 YPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred EecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 864 2 67643 248999999999999999876543
No 319
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.53 E-value=2.1e-12 Score=124.54 Aligned_cols=284 Identities=12% Similarity=0.043 Sum_probs=166.9
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEec-CCchhHHHHHHHHHHHhCCCCEEEEcCCCCh-hhHHHHhhC--CCCe
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA-LSGTGACRLFAEFQRRFHPESHIYFPDPTWS-NHHNIWRDA--QIPE 167 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t-~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~-~~~~~~~~~--g~~~ 167 (435)
.-+.+.|+.+++++.... +.+|+ ++ .+||.+++.+ +..++.+ +.+.+..-.|. .+...++.. +.++
T Consensus 41 ~~~~~~r~~l~~l~~~~~-----~~~v~--f~~gs~T~a~~~~--~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~ 110 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPD-----GYEVI--LGNGGATAFWDAA--TFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEP 110 (361)
T ss_pred HHHHHHHHHHHHHhCCCC-----CceEE--EECCchhHHHHHH--HHhcccc-cccEEecCHHHHHHHHHHHhhhccCCc
Confidence 335677888888874321 23565 65 5699999998 6665533 33334344443 223333431 2356
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
..++. +++..++. .+. +++++|++++.+|.||+..+.++ | ++++|+++|+|.+ +.+...+.+
T Consensus 111 ~~~~~--~~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~pi~~---I---~~~~g~~~iVDav-qs~g~~~id- 172 (361)
T TIGR01366 111 IIVTA--DPGSAPEP-----QAD---PGVDVIAWAHNETSTGVAVPVRR---P---EGSDDALVVIDAT-SGAGGLPVD- 172 (361)
T ss_pred eEEec--CCCCCCCC-----ccC---CCCCEEEEcccCCccceeccccc---c---cccCCCeEEEEcC-ccccCCCCC-
Confidence 66654 22222332 233 67899999999999999998764 3 5889999999999 555443322
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHH---------H---HHHhh-----ccccCC
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQ---------I---QQIAR-----AMYGSP 310 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~---------l---~~~~~-----~~~~~~ 310 (435)
+. +-++++.|..|.+|.+|- ++.++ . +++.++++... . ..... ...+.+
T Consensus 173 ----v~------~~D~~~~s~~K~lg~~~G-l~~~~--~-s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp 238 (361)
T TIGR01366 173 ----IA------ETDVYYFAPQKNFASDGG-LWLAI--M-SPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTP 238 (361)
T ss_pred ----HH------HCCEEEEEchhhcCCCCc-eEEEE--E-CHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCc
Confidence 11 136788999999997741 33333 2 67633322100 0 00000 112233
Q ss_pred ChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCc-ccc---ccCcceeEec-CCCHHHHHH
Q 013839 311 PVHGILLVATILSDPNLKSLWID-EVKIMADRIQRKRTTLRQNLEKLGSSLNW-EHI---TNQLGMFCFS-GLTPYQVDR 384 (435)
Q Consensus 311 ~~~~q~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~---~~~~g~~~~~-~~~~~~~~~ 384 (435)
+.....++.++++.-. +. .++...+++++..+++++.+++.+....+ ... .+..+.+.+. +++.+.+..
T Consensus 239 ~i~~i~~l~~al~~l~-----~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~ 313 (361)
T TIGR01366 239 AIATLALLAEQIDWMN-----GNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAATVAK 313 (361)
T ss_pred hHHHHHHHHHHHHHHH-----HccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHHHHH
Confidence 3333334444443211 12 25667788999999999999988731111 100 0111233443 456666755
Q ss_pred HhhhccEEEeCCC--------cEEecc-CCCCcHHHHHHHHHHHHHh
Q 013839 385 LAKEFHIYMTQDG--------RISMAG-VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 385 ll~~~gI~i~pgg--------Ris~~~-~~~e~i~~~~~~l~~~l~~ 422 (435)
.|+++||.+.++. |+|... .+.+++++++++|++++++
T Consensus 314 ~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 314 ILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred HHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 5577899998761 999754 4889999999999998765
No 320
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.53 E-value=1.8e-12 Score=124.32 Aligned_cols=322 Identities=15% Similarity=0.066 Sum_probs=182.3
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC--CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS--EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.+++..+|+..|.-...-|. -.++.++++.+++.+. ....|.. ....++.+.++++. +. +.+. +++
T Consensus 21 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~~~~~-~~~~~la~~l~~~~-~~-------~~v~--~~~ 88 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVLGH-NHPEWVEEMSEQLEKLVVAGPMFEH-EEKEEMLEELSKWV-NY-------EYVY--MGN 88 (364)
T ss_pred CCCCEEEEcccChhhccCCC-CCHHHHHHHHHHHHhcCCccCCcCC-HHHHHHHHHHHhhc-CC-------CEEE--EeC
Confidence 35678999977742111221 1233444444444321 0112322 22345555555553 21 3566 899
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh--------CCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCc
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD--------AQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~--------~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
+|++|++++..+.......++|+....+|.+....... .+..+..... ....+ .|++.+++.+. +++
T Consensus 89 SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~-~~~~~-~d~~~l~~~i~---~~~ 163 (364)
T PRK04013 89 SGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGF-KHIPF-NDVEAAKEAIT---KET 163 (364)
T ss_pred chHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCc-EEecC-CCHHHHHHHhc---CCc
Confidence 99999999976665543338999999999776433222 1111111000 00011 26788888886 567
Q ss_pred EEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc
Q 013839 197 FFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY 275 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~ 275 (435)
+++++...+...|... +++.++++.++|++||+++|.||+..++..+. .+....+ +...++ -+++|.+| .
T Consensus 164 aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~----~~a~~~~-gv~PDi---v~~gK~lg-g 234 (364)
T PRK04013 164 AAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGK----FLAIEHY-KVEPDI---VTMGKGIG-N 234 (364)
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCc----hhHHHhc-CCCCCE---EEeccccc-C
Confidence 8888877776666654 66789999999999999999999988773321 2233322 222223 34699998 6
Q ss_pred CCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013839 276 GHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEK 355 (435)
Q Consensus 276 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 355 (435)
|..+|.++. +.+ +. ......+.+.++++..++.+.|+.-. ++ +.+++.++. +. .+..
T Consensus 235 G~P~~a~~~---~~~----~~----~~~~~~T~~gnp~~~aaa~a~l~~i~--~~--~l~~~~~~~-------l~-~l~~ 291 (364)
T PRK04013 235 GVPVSLTLT---NFD----VE----RGKHGSTFGGNPLACKAVAVTLRILR--RE--RLVEKAGEK-------FI-EIKG 291 (364)
T ss_pred CceeEEEEe---ccc----cc----CCCcCCCCCcCHHHHHHHHHHHHHHH--hc--cHHHHHHHH-------HH-Hhcc
Confidence 888888863 544 31 11223456677777777666664211 00 111111111 11 2211
Q ss_pred hCCCCCccccccCcceeEecCCC--HHHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHHHHHHHHHh
Q 013839 356 LGSSLNWEHITNQLGMFCFSGLT--PYQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~l~~ 422 (435)
+ .+...... |.+.-+.+. ...+...+.++|+.+.+.| ||... ..+++++++++++|.+++++
T Consensus 292 -~---~v~~vRG~-Gl~~gve~~~~~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 292 -E---RVVTTRGR-GLMIGIVLKKPVGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred -C---cceeeeeC-cEEEEEEeCCcHHHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 1 11222233 334433332 3334333456899998865 77643 24899999999999999865
No 321
>PRK07678 aminotransferase; Validated
Probab=99.53 E-value=1.2e-11 Score=122.63 Aligned_cols=339 Identities=11% Similarity=0.026 Sum_probs=187.4
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC--CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE--FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.++...||+..|.....-| ...+++++++.+++.... ...|.. ....+|-+.+++.+.. .+.+. +++
T Consensus 44 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~~~~-~~~~~lae~l~~~~~~-------~~~v~--f~~ 112 (451)
T PRK07678 44 IQGNRYLDGMSGLWCVNVG-YGRKELAEAAYEQLKTLSYFPLTQSH-EPAIKLAEKLNEWLGG-------EYVIF--FSN 112 (451)
T ss_pred CCCCEEEEccccHHhhcCC-CCCHHHHHHHHHHHHhcCccccccCC-HHHHHHHHHHHHhCCC-------CCEEE--EeC
Confidence 4678899988774211122 122344444444444221 111211 1123444555444311 23566 899
Q ss_pred CchhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHHHhh-CCC------------CeeeeeecCCCC--CC----
Q 013839 125 SGTGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNIWRD-AQI------------PERTYHYYDPDS--KS---- 179 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~--~~---- 179 (435)
+|++|++.+..+..... +| .+|+...-+|.+....... .|. .+..++..+... ++
T Consensus 113 sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (451)
T PRK07678 113 SGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESED 192 (451)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChH
Confidence 99999999976554432 23 6788888888776533221 111 112222110000 00
Q ss_pred -cC---hHhHHHHhh-cCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHH
Q 013839 180 -LD---FAALMDDIK-NAPDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIR 253 (435)
Q Consensus 180 -~d---~e~l~~~i~-~~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 253 (435)
.| ++.+++.+. +.+++..+|++...+.-.|... +++.++++.++|++||+++|.||+..+|+..+ ..+...
T Consensus 193 ~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~~~~ 269 (451)
T PRK07678 193 IYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG---KAFGFM 269 (451)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc---hhHHHH
Confidence 01 233555664 2345678888876665567764 67789999999999999999999988886543 122333
Q ss_pred HhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHH------hhccccCCChhHHHHHHHHhCChh
Q 013839 254 IFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQI------ARAMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 254 ~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
.+ +....++ +++|.+| .| +.+|.+++ +++ +.+.+... ....+.+.++++..++.+.|+.-.
T Consensus 270 ~~-gv~PDiv---t~gK~lg-gG~~Pi~av~~---~~~----i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~ 337 (451)
T PRK07678 270 NY-GVKPDII---TMAKGIT-SAYLPLSATAV---KKE----IYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIME 337 (451)
T ss_pred hc-CCCCCEE---Eeecccc-cCCcceeEEEE---cHH----HHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHH
Confidence 32 2222222 5799998 56 68888864 777 66665431 123455667777777666664211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hCCCCCccccccCcceeEecCC----------CH---HHHHHHhhhc
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEK----LGSSLNWEHITNQLGMFCFSGL----------TP---YQVDRLAKEF 389 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~~~~g~~~~~~~----------~~---~~~~~ll~~~ 389 (435)
+ +...++.++.-++|.+.|++ ++. +......|.++. +.+ +. ..+...+.++
T Consensus 338 ------~--~~~~~~~~~~g~~l~~~l~~~~~~~~~---v~~vrg~Gl~~~-i~~~~~~~~~~~~~~~~a~~i~~~l~~~ 405 (451)
T PRK07678 338 ------N--ENLIERSAQLGELLLEQLKEELGEHPL---VGDIRGKGLLVG-IELVNDKETKEPADNDKVASVVAACKEK 405 (451)
T ss_pred ------h--CCHHHHHHHHHHHHHHHHHHHHhcCCC---EEEEEeeceEEE-EEEecCCcccCcCchHHHHHHHHHHHHC
Confidence 1 12334455555555555543 332 112333333332 211 11 2333334568
Q ss_pred cEEEeCC-------C---cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 390 HIYMTQD-------G---RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 390 gI~i~pg-------g---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
||.+.+. + ||+.. ..++++|++++++|.++++++
T Consensus 406 Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 406 GLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 9998753 2 56542 248999999999999998754
No 322
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.53 E-value=1.8e-13 Score=130.94 Aligned_cols=236 Identities=14% Similarity=0.101 Sum_probs=136.7
Q ss_pred CcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeee
Q 013839 91 ASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTY 170 (435)
Q Consensus 91 ~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v 170 (435)
+.|...=-|..++.++|.+.. .. +++|+|.++..+ +++++.|||+|+++..++......+.+.|++++++
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t------~f--lvnGsT~g~~a~--i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi 133 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKT------FF--LVNGSTSGNQAM--IMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYI 133 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEE------EE--ESSHHHHHHHHH--HHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEE
T ss_pred CccHHHHHHHHHHHhcCCCeE------EE--EecCchHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEe
Confidence 456554445555555676533 33 689999999888 88999999999999999999989999999999998
Q ss_pred eecCCCC---CCcCh-----HhHHHHhhcCCCCcE--EEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeeeeccCC
Q 013839 171 HYYDPDS---KSLDF-----AALMDDIKNAPDSSF--FLLHPSAHNPT--GVDPTEEQWREISYQFKVKGHFPFFDMAYQ 238 (435)
Q Consensus 171 ~~~~~~~---~~~d~-----e~l~~~i~~~~~~~~--~v~~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~vi~Deay~ 238 (435)
+..+++. .++++ +.+++++++++.... ++++. ||| |++. ++++|+++|++++++|++||||.
T Consensus 134 ~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt---~PTY~Gv~~---di~~I~~~~h~~~~~llvDEAhG 207 (417)
T PF01276_consen 134 PPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLT---SPTYYGVCY---DIKEIAEICHKHGIPLLVDEAHG 207 (417)
T ss_dssp EEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEE---SS-TTSEEE----HHHHHHHHCCTECEEEEE-TT-
T ss_pred cCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEe---CCCCCeEEE---CHHHHHHHhcccCCEEEEEcccc
Confidence 6642221 35566 999999998754322 35553 556 5554 57799999999999999999974
Q ss_pred C-ccCCCCcccHHHHHHhhh--cCCeEEEEecccccccccCCcccEEEEEecCh-hHHHHHHHHHHHHhhccccCCChhH
Q 013839 239 G-FASGDLDKDAQAIRIFLE--DEHLIGCAQSYAKSMGLYGHRVGCLSILCVDS-KQAAAIRSQIQQIARAMYGSPPVHG 314 (435)
Q Consensus 239 ~-~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~ 314 (435)
. +.|.+...+ .+..-++ ....++++.|..|++ +++.-+.++.+..+. -..+++.+.+..++ +.+|+.+.
T Consensus 208 ah~~F~~lp~~--a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~---TTSPSY~l 280 (417)
T PF01276_consen 208 AHFGFHPLPRS--ALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQ---TTSPSYPL 280 (417)
T ss_dssp TTGGCSGGGTT--CSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS----SS--HHH
T ss_pred ccccCCCCccc--hhhccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHc---CCChHHHH
Confidence 4 333321111 1111111 123679999999997 566655444334332 21233434333332 22344332
Q ss_pred HHHHHHHhCChhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHh
Q 013839 315 ILLVATILSDPNLKSLW-IDEVKIMADRIQRKRTTLRQNLEK 355 (435)
Q Consensus 315 q~~~~~~l~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~ 355 (435)
...+..+... + ..+-++..++..++.+.+++.+++
T Consensus 281 mASlD~a~~~------m~~~~G~~l~~~~i~~a~~~R~~i~~ 316 (417)
T PF01276_consen 281 MASLDVARAQ------MEEEEGRELLEEAIELAEEFRKKINR 316 (417)
T ss_dssp HHHHHHHHHH------HSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH------HhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 2222221110 1 123344555555666666666643
No 323
>PLN03032 serine decarboxylase; Provisional
Probab=99.53 E-value=5.3e-12 Score=120.93 Aligned_cols=287 Identities=14% Similarity=0.082 Sum_probs=171.2
Q ss_pred HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecC
Q 013839 95 TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYD 174 (435)
Q Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 174 (435)
.+.++.+++.+ +.. ++++.+.+|+|||+|+..+.....-..++.+|+++.-.+......++..|..+..+|.
T Consensus 69 ~~v~~~ia~ll-g~~-----~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~-- 140 (374)
T PLN03032 69 VGVLDWFARLW-ELE-----KDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPT-- 140 (374)
T ss_pred HHHHHHHHHHh-CCC-----CccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeee--
Confidence 34455555555 332 3455345899999999776432222235568888888888888888999999888888
Q ss_pred CCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-----ceeeeeccCCCccCCCCcccH
Q 013839 175 PDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKG-----HFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 175 ~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~-----~~vi~Deay~~~~~~~~~~~~ 249 (435)
..++.+|+++|++++.+...++.+++++..+|+||.+-+ +++|.++|+++| +++.+|.+|..+... .....
T Consensus 141 d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p-~~~~~ 216 (374)
T PLN03032 141 LPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMP-FVSRA 216 (374)
T ss_pred CCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhh-ccCCC
Confidence 345789999999999854335778888889999999855 558889999986 589999997554321 00000
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc-----ccCCC-----hhHHHHHH
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM-----YGSPP-----VHGILLVA 319 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~-----~~~q~~~~ 319 (435)
+.+ .+. ..-+.+..|.+|.++.| ..+|.+.+ .++ ..+.+.....+. +...+ .+..++..
T Consensus 217 ~~~-~~~--~~vDSis~s~HK~~g~P-~g~G~ll~---r~~----~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l 285 (374)
T PLN03032 217 PEV-TFR--KPIGSVSVSGHKFLGCP-MPCGVALT---RKK----HVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTL 285 (374)
T ss_pred ccc-CCC--cCCcEEEECcccccCCC-cCeEEEEE---Ech----hhHhhccCCcccCCCCCcccCCCchHHHHHHHHHH
Confidence 011 111 12345677899998733 44777753 344 333332211111 11111 12222222
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCCC-c
Q 013839 320 TILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDG-R 398 (435)
Q Consensus 320 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pgg-R 398 (435)
..+.. +..++..++..+..+++.+.|++.+.. ....|......|..-..+. +.++..+...+.. |
T Consensus 286 ~~~G~--------~g~~~~~~~~~~~a~~l~~~l~~~~~~---~~~~p~~~~V~f~~~~~~~---~~~~w~l~~~~~~~h 351 (374)
T PLN03032 286 RRKGY--------RGIKRDVQHCMRNAHYLKDRLTEAGLT---CRLNELSSTVVFERPMDEA---FIKKWQLACEGDIAH 351 (374)
T ss_pred HHhCH--------HHHHHHHHHHHHHHHHHHHHHHhCCCc---EEECCCceEEEEcCCCcHh---HhheeeecccCCEEE
Confidence 22221 455667777788888899999887642 2344554444443333222 2223333433333 8
Q ss_pred EEecc-CCCCcHHHHHHHHHH
Q 013839 399 ISMAG-VTTGNVNYLANAIHE 418 (435)
Q Consensus 399 is~~~-~~~e~i~~~~~~l~~ 418 (435)
+.+.. .+.+.++++++.|++
T Consensus 352 i~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 352 VVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred EEECCCCCHHHHHHHHHHHhc
Confidence 87654 355667777776654
No 324
>PRK15029 arginine decarboxylase; Provisional
Probab=99.53 E-value=2.2e-12 Score=132.37 Aligned_cols=176 Identities=13% Similarity=0.047 Sum_probs=118.9
Q ss_pred CcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeee
Q 013839 91 ASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTY 170 (435)
Q Consensus 91 ~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v 170 (435)
+.|...--|..++.++|.+.+ .. +++|+|.++..+ +++.+.+||+|+++..++......+.+.|++++++
T Consensus 203 p~G~I~eAq~~aA~~fgA~~t------~F--lvNGST~gn~a~--i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl 272 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADRS------WS--VVVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYM 272 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCcE------EE--EeCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 356655556666666677533 33 699999998877 88899999999999999999999999999999998
Q ss_pred eecCCCC----CCcC-----hHhHHHHhhcCCC-------CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeee
Q 013839 171 HYYDPDS----KSLD-----FAALMDDIKNAPD-------SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFD 234 (435)
Q Consensus 171 ~~~~~~~----~~~d-----~e~l~~~i~~~~~-------~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~D 234 (435)
+..- +. .+++ ++.+++++.+++. +++++++++|+. -|++. ++++|+++|+++++++++|
T Consensus 273 ~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~---di~~I~~~~h~~~~~llvD 347 (755)
T PRK15029 273 VPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCY---NAKEAQDLLEKTSDRLHFD 347 (755)
T ss_pred cccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceee---CHHHHHHHHHhcCCeEEEE
Confidence 5321 22 3445 8999999987642 222677744322 26665 4569999999999999999
Q ss_pred ccCCC-ccCCCCcccHHHHHHhh-h-cCCeEEEEecccccccccCCcccEEE
Q 013839 235 MAYQG-FASGDLDKDAQAIRIFL-E-DEHLIGCAQSYAKSMGLYGHRVGCLS 283 (435)
Q Consensus 235 eay~~-~~~~~~~~~~~~~~~~~-~-~~~~~i~~~s~SK~~g~~G~RvG~~~ 283 (435)
|||.. +.|.+.-+...++..-. . .+..++++.|.+|++ +++.-|.++
T Consensus 348 EAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~L 397 (755)
T PRK15029 348 EAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYI 397 (755)
T ss_pred CccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhh
Confidence 99744 44432110001110000 1 223459999999997 455545443
No 325
>PRK07481 hypothetical protein; Provisional
Probab=99.52 E-value=3.4e-11 Score=119.27 Aligned_cols=345 Identities=12% Similarity=0.076 Sum_probs=187.3
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCC-CC--CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFL-ES--ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++...||+..|.-...-|.. .+++++++.+++...... .+ .......++-+.+++.+.... .+++. ++
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~-----~~~v~--f~ 110 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNVGHN-REEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG-----MRRVF--FS 110 (449)
T ss_pred CCCCEEEECchhHHhhcCCCC-CHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC-----CCEEE--Ec
Confidence 456788998777421112212 233444444554422111 01 111112234444444331111 23666 89
Q ss_pred CCchhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHHHhhCCC-------------CeeeeeecCCC--CCC-cC
Q 013839 124 LSGTGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNIWRDAQI-------------PERTYHYYDPD--SKS-LD 181 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~--~~~-~d 181 (435)
++|++|++.+..+..... +| .+|+...-+|.+.......... .+..++..+.. .+. .|
T Consensus 111 ~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d 190 (449)
T PRK07481 111 SGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQD 190 (449)
T ss_pred CchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCC
Confidence 999999999976554431 34 5788888888776432211110 11222210000 011 13
Q ss_pred hHh--------HHHHhh-cCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHH
Q 013839 182 FAA--------LMDDIK-NAPDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQA 251 (435)
Q Consensus 182 ~e~--------l~~~i~-~~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~ 251 (435)
.+. +++.+. ..+++..+|++...+.-.|... +++.++++.++|++||+++|.||+..+|+..+ ..+.
T Consensus 191 ~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a 267 (449)
T PRK07481 191 PEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG---SWFG 267 (449)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc---hhhH
Confidence 333 344443 2235678888877666677754 67779999999999999999999998886543 1222
Q ss_pred HHHhhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHH-------hhccccCCChhHHHHHHHHhC
Q 013839 252 IRIFLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQI-------ARAMYGSPPVHGILLVATILS 323 (435)
Q Consensus 252 ~~~~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~ 323 (435)
...+ +...+++ +++|.++ .| +.+|.+++ +++ +.+.+... ....+.+.++++..++.+.|+
T Consensus 268 ~~~~-gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~----i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~ 335 (449)
T PRK07481 268 SRGW-GVKPDIM---CLAKGIT-SGYVPLGATMV---NAR----IADAFEANADFGGAIMHGYTYSGHPVACAAALATLD 335 (449)
T ss_pred hhhc-CCCCCEE---EEeeccc-CCCcCceEEEE---cHH----HHHHHhccCccccccccCCCCCCCHHHHHHHHHHHH
Confidence 2222 2222233 3699987 67 47888864 777 66666431 123355667776666666664
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CccccccCcceeEecCC----------C--H---HHHHHHhh
Q 013839 324 DPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSL-NWEHITNQLGMFCFSGL----------T--P---YQVDRLAK 387 (435)
Q Consensus 324 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~----------~--~---~~~~~ll~ 387 (435)
.-. + +...++.++.-+.+.+.|+++-... .+......|. +.-+.+ + . ..+...+.
T Consensus 336 ~l~------~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl-m~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (449)
T PRK07481 336 IVV------R--EDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGL-MLALDLVADKATREPIDPSKGYANAVADVAR 406 (449)
T ss_pred HHH------h--hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecce-EEEEEecccccccCCCCchhHHHHHHHHHHH
Confidence 211 1 2334455555566666665542100 0122333333 332211 1 1 22333335
Q ss_pred hccEEEeCCC---cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 388 EFHIYMTQDG---RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 388 ~~gI~i~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
++||.+.+.| ||+.. ..+++++++++++|.++++++
T Consensus 407 ~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 407 ENGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred hCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 6899999876 77743 248999999999999998754
No 326
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.51 E-value=7.6e-14 Score=129.14 Aligned_cols=197 Identities=16% Similarity=0.076 Sum_probs=136.1
Q ss_pred cchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEE
Q 013839 69 VLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYF 148 (435)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv 148 (435)
+.+.+.+++.+...+.. .|+...-..++.+.+++.+ +.. ..+ ++.+|+.|..++ +..++.|++.|++
T Consensus 7 ~~~~m~~a~~~a~~gd~-~Yg~D~~~~~l~~~i~~l~-g~e-------~a~--f~~sGT~An~~a--l~~~~~~~~~vi~ 73 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDD-AYGEDPTTARLEERIAELF-GKE-------AAL--FVPSGTMANQLA--LRAHLRPGESVIC 73 (290)
T ss_dssp S-HHEEHHHHHTTSB-C-CTTSSHHHHHHHHHHHHHH-TSS-------EEE--EESSHHHHHHHH--HHHHHHTTEEEEE
T ss_pred CCHHHHHHHHccccCCc-ccCCChhHHHHHHHHHHHc-CCC-------EEE--EeCCCChHHHHH--HHHHHhcCCceec
Confidence 33444555555554534 5998888889999999988 442 233 789999999988 6667789999999
Q ss_pred cCCCChhh---HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhc---CCCCcEEEEeCCCCCCC-CCCCCHHHHHHHH
Q 013839 149 PDPTWSNH---HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKN---APDSSFFLLHPSAHNPT-GVDPTEEQWREIS 221 (435)
Q Consensus 149 ~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~v~~~~p~NPt-G~~~~~~~l~~i~ 221 (435)
..+++... .......|++++.++. ++++.+|+++|++.+.+ +..++++|.+.+|+|-. |.+++.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~--~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPS--DDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBE--CTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCC--cccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 99876433 2233568999998876 33368999999999986 33568999999999874 8999999999999
Q ss_pred HHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChh
Q 013839 222 YQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSK 290 (435)
Q Consensus 222 ~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~ 290 (435)
++|++||+.++.|.+-....-. ....++..+. ..-+.+..|++|.+++++ |-+++ . +++
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~~---~~~~~~~e~~--~~~D~v~~~~tK~~g~~~---Gavl~-~-~~~ 210 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAAA---ALGVSLAEIA--AGADSVSFGGTKNGGAPG---GAVLA-G-NKE 210 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHHC---HHHHHHHHHH--TTSSEEEEETTSTT-SSS---EEEEE-E-SHH
T ss_pred HHHHhCceEEEEehhhHHHhhh---cccccHHHHh--hhCCEEEEEEEccccccc---ceEEE-e-chH
Confidence 9999999999999994211110 0112333333 234566778999988776 66652 3 777
No 327
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.50 E-value=3.2e-11 Score=119.66 Aligned_cols=279 Identities=11% Similarity=0.032 Sum_probs=162.4
Q ss_pred CCeeeEecCCchhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHHHhhC-CC------------CeeeeeecCCC
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNIWRDA-QI------------PERTYHYYDPD 176 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~ 176 (435)
+.+. ++++|++|++.+..+..... +| .+|+....+|.+........ |. .+..+|..+..
T Consensus 130 ~~v~--f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~ 207 (472)
T PRK08742 130 SKVF--YADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAY 207 (472)
T ss_pred CEEE--EeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCcc
Confidence 3677 89999999999976655441 33 68899998887765332211 11 11222221100
Q ss_pred --CCCc--------ChHhHHHHhhcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCC
Q 013839 177 --SKSL--------DFAALMDDIKNAPDSSFFLLHPS-AHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGD 244 (435)
Q Consensus 177 --~~~~--------d~e~l~~~i~~~~~~~~~v~~~~-p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~ 244 (435)
.++. +++.+++.+.+.+.+..+|++.. .++-.|.. .+++.++++.++|++||+++|.||+..+|+..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG 287 (472)
T PRK08742 208 LAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTG 287 (472)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc
Confidence 0111 25666777764445677777765 46666774 578889999999999999999999998887543
Q ss_pred CcccHHHHHHhhhcCCeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHHH------hhccccCCChhHHHH
Q 013839 245 LDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQI------ARAMYGSPPVHGILL 317 (435)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~~ 317 (435)
..+....+ +....+++ ++|.++ .|. .+|.+++ +++ +.+.+... ....+.+.++++..+
T Consensus 288 ---~~~a~e~~-gv~PDiv~---~gKgl~-gG~~Plaav~~---~~e----i~~~~~~~~~~~~~~h~~T~~gnpl~~Aa 352 (472)
T PRK08742 288 ---TLFACEQA-GVMPDLLC---LSKGLT-GGFLPLSAVLA---TQQ----LYDAFLDDSRERAFLHSHSYTGNPLACAA 352 (472)
T ss_pred ---cchHHHhc-CCCCCEEE---Eccccc-CCCCCcceeec---cHH----HHHHhhccCccCccCcCCCCCccHHHHHH
Confidence 12333222 22223333 599998 674 7888864 777 66655321 112345566776666
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhCCCCCccccccCcceeEecCC----------CH-----
Q 013839 318 VATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNL---EKLGSSLNWEHITNQLGMFCFSGL----------TP----- 379 (435)
Q Consensus 318 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~~~~~~~~~~g~~~~~~~----------~~----- 379 (435)
+.+.|+--. + +...++.++.-+++.+.+ ++++. +......|-++. +.+ ..
T Consensus 353 a~a~L~~i~------~--~~l~~~~~~~g~~l~~~~~~~~~~~~---i~dvRG~Gl~~g-iel~~~~~~~~~~~~~~~~~ 420 (472)
T PRK08742 353 ALATLDIFA------D--DDVIARNQPTAARMTQLAAQIGEHPH---VADVRQAGMVVA-FELTRGGNKRTPFPPAARVG 420 (472)
T ss_pred HHHHHHHHH------H--CCHHHHHHHHHHHHHHHHHHHhcCCC---eeeEeccceEEE-EEeccCccccccCCchhHHH
Confidence 666654211 1 122233333333333333 33321 222333333333 211 00
Q ss_pred HHHHHHhhhccEEEeCCC---cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 380 YQVDRLAKEFHIYMTQDG---RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 380 ~~~~~ll~~~gI~i~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
..+...+.++||.+.+.| ||... ..+++++++++++|.+++++.
T Consensus 421 ~~~~~~~~~~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 421 LHAYRAALARGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred HHHHHHHHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 123233346899999876 66642 248999999999999999753
No 328
>PRK07046 aminotransferase; Validated
Probab=99.50 E-value=3.9e-11 Score=118.66 Aligned_cols=332 Identities=14% Similarity=0.033 Sum_probs=186.1
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++...||+..|.-...-|. ..+.+++++.+++..+....+ +.....++.|.+++.. + .+.+. ++++|
T Consensus 72 ~DG~~yiD~~~g~g~~~lGh-~~p~i~~Av~~q~~~~~~~~~-~~~~~~~lAe~l~~~~-~-------~~~v~--F~nSG 139 (453)
T PRK07046 72 VDGHRYDDFCLGDTGAMFGH-SPAPVARALAEQARRGLTTML-PSEDAAWVGEELARRF-G-------LPYWQ--VATTA 139 (453)
T ss_pred CCCCEEEEecccccccccCC-CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHh-C-------CCEEE--EECCH
Confidence 46788999877752111121 123444445555544322222 2233345555555543 2 24677 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHh-h-CCCCe------eeee--ecC---CCCCCcChHhHHHHhhcCC
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWR-D-AQIPE------RTYH--YYD---PDSKSLDFAALMDDIKNAP 193 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~-~g~~~------~~v~--~~~---~~~~~~d~e~l~~~i~~~~ 193 (435)
++|...+..+.......++|+...-+|.++..... . .+.+. ..++ ..+ .-.| -|++.+++.+..
T Consensus 140 tEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~-- 216 (453)
T PRK07046 140 TDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALAD-- 216 (453)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCC--
Confidence 99999997666555455889998988988743211 1 01000 0000 000 0001 278899888852
Q ss_pred CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccc
Q 013839 194 DSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSM 272 (435)
Q Consensus 194 ~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 272 (435)
.+..+|++.....-.|.+. +++.++++.++|++||+++|.||+.. |..+-. . ....+ +... +++ +++|.+
T Consensus 217 ~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~G--g--~~~~~-gv~P-Di~--t~gK~l 287 (453)
T PRK07046 217 GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPG--G--YTRAH-GLEP-DFL--VVGKPI 287 (453)
T ss_pred CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCc--c--hhHHh-CCCc-cce--eehhhh
Confidence 4567777765555556554 56789999999999999999999965 432210 0 11111 2212 232 489999
Q ss_pred cccCCcccEEEEEecChhHHHHHHHHHHHHh---------hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 013839 273 GLYGHRVGCLSILCVDSKQAAAIRSQIQQIA---------RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQ 343 (435)
Q Consensus 273 g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 343 (435)
| .|+.+|.+++ .++ +.+.+.... ...+.+.++++..++.+.|+.-. + ....++..
T Consensus 288 g-gG~Pi~av~g---~~~----i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~------~--~~~~~~~~ 351 (453)
T PRK07046 288 A-GGVPCAVYGF---SAE----LAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVM------T--EAAYAHML 351 (453)
T ss_pred c-CCCcceeeee---hHH----HHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHh------c--ccHHHHHH
Confidence 8 7899998864 777 766665311 12345566776666666654211 0 11233333
Q ss_pred HHHHHHHHHH----HhhCCCCCccccccCcceeEec--C--C----------CHH----HHHHHhhhccEEEeCCC---c
Q 013839 344 RKRTTLRQNL----EKLGSSLNWEHITNQLGMFCFS--G--L----------TPY----QVDRLAKEFHIYMTQDG---R 398 (435)
Q Consensus 344 ~~~~~l~~~l----~~~~~~~~~~~~~~~~g~~~~~--~--~----------~~~----~~~~ll~~~gI~i~pgg---R 398 (435)
+.-+.|.+.| ++.+.+ +. ....+.++.+. . . +.+ +...+ .++||.+.|.+ +
T Consensus 352 ~~g~~l~~~L~~l~~~~~~~--~~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~~~~~~ 427 (453)
T PRK07046 352 ALAARLAAGLRAVIARHGLP--WH-VTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYL-LNRGVLITPFHNMML 427 (453)
T ss_pred HHHHHHHHHHHHHHHhCCCC--eE-EEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHH-HHCCCEEecccCcEE
Confidence 3444444444 344432 22 22333333221 1 0 111 22344 45899998865 6
Q ss_pred EEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 399 ISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 399 is~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
++.. .++++++++++++.++++++
T Consensus 428 ~~p~-~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 428 VCPA-TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred EeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 7764 59999999999999998754
No 329
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.50 E-value=1.2e-11 Score=121.38 Aligned_cols=176 Identities=11% Similarity=0.069 Sum_probs=116.9
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhh------HHHHhhCCCCe
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNH------HNIWRDAQIPE 167 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~------~~~~~~~g~~~ 167 (435)
+..+++.+++++... . ++++++|+.|+.++ + ..+.+||+|++.+..+..| ...++..|+++
T Consensus 124 ~~~le~~lA~l~gae--------~--alvv~sg~aAi~l~--l-~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~ 190 (454)
T TIGR00474 124 YSHVEGLLCELTGAE--------D--ALVVNNNAAAVLLA--L-NTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKL 190 (454)
T ss_pred HHHHHHHHHHHhCCC--------c--EEEECCHHHHHHHH--H-HHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEE
Confidence 367888888887332 2 22578888888776 4 4578999999998664222 24567789999
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCC--
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT--GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASG-- 243 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~-- 243 (435)
+.++.. + ..++++++++++ ++|+++++.+++||+ |.. ...++++|+++|++||+++++|.....+...
T Consensus 191 ~~v~~~--~--~~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~-~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~ 262 (454)
T TIGR00474 191 VEVGTT--N--RTHLKDYEDAIT---ENTALLLKVHTSNYRIVGFT-EEVSIAELVALGREHGLPVMEDLGSGSLVDLSR 262 (454)
T ss_pred EEeCCC--C--CCCHHHHHHhcC---cCCEEEEEEccCcccccCCC-CCCCHHHHHHHHHHcCCeEEEECCCcccccchh
Confidence 888652 1 357899999997 789999999999996 531 2345779999999999999999762222110
Q ss_pred -CCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHH
Q 013839 244 -DLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQ 301 (435)
Q Consensus 244 -~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~ 301 (435)
+.. ..+.+....+ .+-++++.|.+|.+|-| ..|++++ .++ +++.+++
T Consensus 263 ~gl~-~~p~~~~~~~-~GaDiv~fSg~K~LgGp--~~G~i~g---~~~----~i~~l~~ 310 (454)
T TIGR00474 263 YGLP-DEPTVQEVIA-AGVDLVTFSGDKLLGGP--QAGIIVG---KKE----LIERLKK 310 (454)
T ss_pred ccCC-CCcccccHhH-cCCCEEEecCccccCCC--eEEEEEE---CHH----HHHhhhh
Confidence 000 0111111111 23468899999998644 3688864 677 5555443
No 330
>PRK07480 putative aminotransferase; Validated
Probab=99.50 E-value=3.7e-11 Score=119.03 Aligned_cols=342 Identities=12% Similarity=0.070 Sum_probs=187.4
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCC----CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEe
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSE----FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQ 122 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~ 122 (435)
.++...||+..|.....-| ...+++++++.+++.... ...+. .....+|.+.+++.+.+ + -+++. +
T Consensus 47 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~~~~~~~~~-~~~~~~lae~L~~~~p~-~-----~~~v~--f 116 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNVG-YGRKELADAAARQMRELPYYNTFFKTT-HPPAIELAAKLAEVAPP-G-----FNHVF--F 116 (456)
T ss_pred CCCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCcccccccC-CHHHHHHHHHHHHhCCC-C-----cCEEE--E
Confidence 4668899998774211112 123334444444544221 11121 12223444444444311 1 23666 8
Q ss_pred cCCchhHHHHHHHHHHHh----C-CC-CEEEEcCCCChhhHHHH-hhCCC------------CeeeeeecCCCCC----C
Q 013839 123 ALSGTGACRLFAEFQRRF----H-PE-SHIYFPDPTWSNHHNIW-RDAQI------------PERTYHYYDPDSK----S 179 (435)
Q Consensus 123 t~gg~~a~~~~~~~~~~~----~-~g-d~Vlv~~p~y~~~~~~~-~~~g~------------~~~~v~~~~~~~~----~ 179 (435)
+++|++|++.+..+.... . +| .+|+...-+|.+..... ...|. .+..++. +..+ .
T Consensus 117 ~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~ 194 (456)
T PRK07480 117 TNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQ--PYWFGEGGD 194 (456)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCC--CcccccccC
Confidence 999999999997655443 1 33 56888888887653221 11110 0111111 0000 0
Q ss_pred cC--------hHhHHHHhhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 180 LD--------FAALMDDIKN-APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 180 ~d--------~e~l~~~i~~-~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
.+ .+.+++.+.+ .+++..+|++...+.-.|... +.+.+++|.++|++||+++|.||+..+|+..+ ..
T Consensus 195 ~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~ 271 (456)
T PRK07480 195 MTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTG---EW 271 (456)
T ss_pred CChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---ch
Confidence 11 2556555532 335677888877666677755 66779999999999999999999988886443 12
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHH----HhhccccCCChhHHHHHHHHhCC
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQ----IARAMYGSPPVHGILLVATILSD 324 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~q~~~~~~l~~ 324 (435)
+....+ +.... +-+++|.++ .|. .+|.+++ +++ +.+.+.. .....+.+.++++..++.+.|+.
T Consensus 272 ~a~~~~-gv~PD---iv~~gK~l~-gG~~Pi~av~~---~~~----i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~ 339 (456)
T PRK07480 272 FGSQHF-GIKPD---LMTIAKGLT-SGYIPMGAVGV---GDR----VAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRI 339 (456)
T ss_pred hhhhhc-CCCCC---eeeeehhhc-cCCccceEEEE---cHH----HHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHH
Confidence 222222 22222 235799988 674 7888864 777 6665521 12234566777777777777642
Q ss_pred hhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhC-CCCCccccccCcceeEecCC-----------C----HHHHHHHhh
Q 013839 325 PNLKSLWIDEVKIMADRI-QRKRTTLRQNLEKLG-SSLNWEHITNQLGMFCFSGL-----------T----PYQVDRLAK 387 (435)
Q Consensus 325 ~~l~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~-~~~~~~~~~~~~g~~~~~~~-----------~----~~~~~~ll~ 387 (435)
-. + ....++. ++.-++|.+.|+++. .+ .+......|.++. +.+ + ...+...+.
T Consensus 340 l~------~--~~l~~~~~~~~g~~l~~~l~~l~~~~-~i~~vrG~Glm~g-ie~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (456)
T PRK07480 340 LR------D--EGIVERVRDDTGPYLQKRLRELADHP-LVGEVRGVGLVGA-IELVKDKATRERFEAGGGVGTICRDHCF 409 (456)
T ss_pred HH------h--CCHHHHHHHHHHHHHHHHHHHhhcCC-CeeeEEeecceEE-EEEeccccccccCcchhhHHHHHHHHHH
Confidence 11 1 1233344 244455555554431 11 1122333343333 211 0 123433345
Q ss_pred hccEEEeCCC---cEEec-cCCCCcHHHHHHHHHHHHHhhhh
Q 013839 388 EFHIYMTQDG---RISMA-GVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 388 ~~gI~i~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
++||.+.+.| ||+.. ..+++++++++++|.+++.++..
T Consensus 410 ~~Gll~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 410 ANGLIMRAVGDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred HCCcEEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6899998765 67653 23899999999999999987643
No 331
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.50 E-value=3.2e-11 Score=119.66 Aligned_cols=345 Identities=12% Similarity=0.029 Sum_probs=185.7
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcccc-CCCeeeEec-C
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVK-EGRSAGVQA-L 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~v~~~~t-~ 124 (435)
.++...||+..|.-...-| ...+.+++++.+++...... ....-..+.+..+++.+...-...+. .+.+. ++ +
T Consensus 60 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~--f~~~ 134 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALG-HNHPVVIEAIQQVLADELPL--HTLDLTTPVKDQFVQDLFASLPEAFAREAKIQ--FCGP 134 (464)
T ss_pred CCCCEEEEccCCccccccC-CCCHHHHHHHHHHHHhhhcc--cccccCCHHHHHHHHHHHHhCcccccccceEE--EeCC
Confidence 4678899987775211112 12334445455555322111 00000112333444444221100000 02343 44 7
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh-CCC------------CeeeeeecCCC--CCC--------cC
Q 013839 125 SGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD-AQI------------PERTYHYYDPD--SKS--------LD 181 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~--~~~--------~d 181 (435)
+|++|++.+..+........+|+...-+|.+....... .|. .+..+|..+.. .++ .+
T Consensus 135 SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 214 (464)
T PRK06938 135 TGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRAN 214 (464)
T ss_pred CcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHH
Confidence 99999999976655443447888888888776533221 110 12223321110 001 13
Q ss_pred hHhHHHHhhcCC---CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhh
Q 013839 182 FAALMDDIKNAP---DSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE 257 (435)
Q Consensus 182 ~e~l~~~i~~~~---~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~ 257 (435)
++.+++.+.+.. +...+|++...+.-.|.+. +++.++++.++|++||+++|.||+..+|+-.+ ..+....+ +
T Consensus 215 ~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~e~~-g 290 (464)
T PRK06938 215 LHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG---KMFAFEHA-G 290 (464)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---HHHHHHhc-C
Confidence 567777776321 2567777766666567755 68889999999999999999999998886543 12233222 2
Q ss_pred cCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 013839 258 DEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKI 337 (435)
Q Consensus 258 ~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~ 337 (435)
....++ +++|.+| .|..+|.+++ .++ + +.+.......+.+.++++..++.+.|+.-. + +.
T Consensus 291 v~PDiv---~~gKglg-gG~PlsAv~~---~~~----~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~------~--~~ 350 (464)
T PRK06938 291 IIPDVV---VLSKAIG-GSLPLAVVVY---REW----L-DTWQPGAHAGTFRGNQMAMAAGSATLRYIK------E--HR 350 (464)
T ss_pred CCCCEE---Eeecccc-CCCceEEEee---hhH----h-hccCCCCCCCCCCcCHHHHHHHHHHHHHHH------H--hH
Confidence 222333 3599998 7899988863 544 3 333222223455667777766666664211 1 12
Q ss_pred HHHHHHHHHHHHHHHHHhhC--CCCCccccccCcceeEecCC---------------C---HHHH-HHHhhhccEEEeCC
Q 013839 338 MADRIQRKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGL---------------T---PYQV-DRLAKEFHIYMTQD 396 (435)
Q Consensus 338 ~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~---------------~---~~~~-~~ll~~~gI~i~pg 396 (435)
..++.++.-++|.+.|+++- .+ .+......| ++.-+.+ + ...+ ..+ .++||.+.++
T Consensus 351 l~~~~~~~G~~l~~~L~~l~~~~~-~i~~VrG~G-lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~ 427 (464)
T PRK06938 351 LAEHAAAMGERLREHLRQLQRDYP-QLGDVRGRG-LMLGVEIVDPQGEPDALGHPPANGELASLIQREC-LRRGLILELG 427 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-Ceeeeeccc-eEEEEEeccCcccccccccCCccHHHHHHHHHHH-HHCCeEEeec
Confidence 33445555555555555431 11 112223333 3332211 1 1223 444 4689999874
Q ss_pred C------cEEe-ccCCCCcHHHHHHHHHHHHHhh
Q 013839 397 G------RISM-AGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 397 g------Ris~-~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
| ||.. ...++++++++++++.+++.+.
T Consensus 428 g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 428 GRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 3 6653 2348999999999999998764
No 332
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.50 E-value=8.5e-12 Score=108.82 Aligned_cols=288 Identities=14% Similarity=0.095 Sum_probs=182.8
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeec
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYY 173 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 173 (435)
+..+.+.+++++ +.+ .+- +|+|+.+|-+.+ +.+++.+||.|++....+....-+++.+|.++..||..
T Consensus 63 I~~F~~dlaeFl-g~D-------~~R--~t~GARe~Kfav--Mhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~t 130 (382)
T COG1103 63 IKDFLEDLAEFL-GMD-------EVR--VTAGAREAKFAV--MHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNT 130 (382)
T ss_pred HHHHHHHHHHHh-CCc-------eee--ecccchhhHHHH--HHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCC
Confidence 457888899998 554 444 799999999988 88899999999999987665666778999999999976
Q ss_pred CCCCCCcChHhHHHHhhcC----CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccH
Q 013839 174 DPDSKSLDFAALMDDIKNA----PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDA 249 (435)
Q Consensus 174 ~~~~~~~d~e~l~~~i~~~----~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~ 249 (435)
....+.+++|...+.|++. .+.+.+.++.++. |...+..|.++++++|++++++++...+|..-.-.
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~D---g~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmp------ 201 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVD---GEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMP------ 201 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEeccC---CCcCCchhhHHHHHHHHHcCCceEeecceeecccc------
Confidence 6667899998887777652 2346777775554 44455667789999999999999999998643321
Q ss_pred HHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh-h------ccccCCChhHHHHHHHHh
Q 013839 250 QAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA-R------AMYGSPPVHGILLVATIL 322 (435)
Q Consensus 250 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-~------~~~~~~~~~~q~~~~~~l 322 (435)
.+. ..-..+++++|-.|.+++. -.+|.+.. ..+ ..+.+.+.. + .-.+++..-+.-.++..-
T Consensus 202 vs~----ke~g~DFiVgSGHKsmAAs-~PiGvl~~---~eE----~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmA 269 (382)
T COG1103 202 VSG----KEIGADFIVGSGHKSMAAS-APIGVLAM---SEE----WAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMA 269 (382)
T ss_pred ccc----cccCCCEEEecCccchhcc-CCeeEEee---hhH----HHHHHHhhcccccccceeeeecccccCchHHHHHh
Confidence 111 1124578899999999844 46888853 666 433333222 1 112233322222222222
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc--ccCc-ce--eEecCC---C------HHHHHHHhhh
Q 013839 323 SDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHI--TNQL-GM--FCFSGL---T------PYQVDRLAKE 388 (435)
Q Consensus 323 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~-g~--~~~~~~---~------~~~~~~ll~~ 388 (435)
+-+... +.+ ..++.--++.+++.+.|+++|. +... .|.. -. |-...+ + .-++..-|++
T Consensus 270 SfP~V~----eRV-krWdeEv~kaR~fv~elEkigg---~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~ 341 (382)
T COG1103 270 SFPHVV----ERV-KRWDEEVEKARWFVAELEKIGG---VKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKK 341 (382)
T ss_pred cCHHHH----HHH-HHHHHHHHHHHHHHHHHHHhhh---HHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHh
Confidence 222110 111 1222223355677788887763 1111 1111 11 111122 1 1134444577
Q ss_pred ccEEEe-CCC----cEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 389 FHIYMT-QDG----RISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 389 ~gI~i~-pgg----Ris~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
.||.-. ||- .+|+.+++.|++++.++++++++++
T Consensus 342 RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 342 RGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred cCccccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHh
Confidence 787654 443 7788788999999999999998875
No 333
>PRK07036 hypothetical protein; Provisional
Probab=99.50 E-value=6.3e-11 Score=117.72 Aligned_cols=348 Identities=9% Similarity=0.035 Sum_probs=189.5
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC-CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS-EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.+++..||+..|.....-| .-.+++++++.+++... ....+. ....+.+..+++.+...-.. .-+.+. ++++
T Consensus 48 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~--~~~~v~--f~~s 120 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVG-YGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELAPG--DLNHVF--LTTG 120 (466)
T ss_pred CCCCEEEECcccHHhhcCC-CCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhCCC--CcCEEE--EeCC
Confidence 4678899988774211112 11233444444444321 011111 01123344455554221100 023666 8999
Q ss_pred chhHHHHHHHHHHHh----C-CC-CEEEEcCCCChhhHHHHhhC-CC------------CeeeeeecCC--CCCCcC---
Q 013839 126 GTGACRLFAEFQRRF----H-PE-SHIYFPDPTWSNHHNIWRDA-QI------------PERTYHYYDP--DSKSLD--- 181 (435)
Q Consensus 126 g~~a~~~~~~~~~~~----~-~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~--~~~~~d--- 181 (435)
|++|++.+..+.... . +| .+|+....+|.+....+... |- .+..++..+. ...+.+
T Consensus 121 GseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 200 (466)
T PRK07036 121 GSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAA 200 (466)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHH
Confidence 999999997655433 1 22 67888888887764332211 10 1222221100 001111
Q ss_pred -----hHhHHHHhhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHH
Q 013839 182 -----FAALMDDIKN-APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRI 254 (435)
Q Consensus 182 -----~e~l~~~i~~-~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~ 254 (435)
.+.+++.+.+ .+++..+|++...+...|... +++.+++|.++|++||+++|.||+..+|+-.+ ..+....
T Consensus 201 ~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~~~~~ 277 (466)
T PRK07036 201 FCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG---HFFASEA 277 (466)
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc---hhhhhhh
Confidence 2345555543 335677888877776677755 77889999999999999999999988885543 1222221
Q ss_pred hhhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHH-------hhccccCCChhHHHHHHHHhCChh
Q 013839 255 FLEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQI-------ARAMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 255 ~~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
..+.... +-+++|.++ .| ..+|.+++ +++ +.+.+... ....+.+.++++..++.+.|+.-.
T Consensus 278 ~~gv~PD---ivt~gK~l~-gG~~Pi~av~~---~~~----i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~ 346 (466)
T PRK07036 278 VFGIQPD---IITFAKGLT-SGYQPLGAVII---SER----LLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIME 346 (466)
T ss_pred hcCCCCC---EEEEccccc-cCccccEEEEE---cHH----HHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 1122222 235799998 67 47888864 777 66655421 112355566777666666664211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCC------------C---HHHHHHHhhhccE
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGL------------T---PYQVDRLAKEFHI 391 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~------------~---~~~~~~ll~~~gI 391 (435)
+ ....++.++..++|.+.|+.+.--..+......|. +..+.+ + ...+...+.++||
T Consensus 347 ------~--~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl-~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv 417 (466)
T PRK07036 347 ------R--EGLCEHVREVGPYFEERLASLRELPLVGDVRGDHL-MACVECVADKGSKALLPEDIAIGQRIDRHCQERGL 417 (466)
T ss_pred ------h--CCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeece-EEEEEEccCccccCCCCchhHHHHHHHHHHHHCCc
Confidence 1 23445555556666666654311001122333333 332322 0 1233333456899
Q ss_pred EEeCCC---cEEec-cCCCCcHHHHHHHHHHHHHhhh
Q 013839 392 YMTQDG---RISMA-GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 392 ~i~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
.+.+.| |++.. ..+++++++++++|.+++++..
T Consensus 418 l~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 418 LVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred EEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 998865 66632 2489999999999999987764
No 334
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.48 E-value=1.1e-11 Score=126.11 Aligned_cols=174 Identities=14% Similarity=0.125 Sum_probs=115.5
Q ss_pred CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH-HHhhCCCCe
Q 013839 89 ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN-IWRDAQIPE 167 (435)
Q Consensus 89 ~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~ 167 (435)
-...|...--|..|+.++|.+.+ .. +++|+|.++..+ +++.+.+||+|+++..++..... .+.+.|+++
T Consensus 170 ~~~eG~i~eAq~~AA~~fgAd~t------yF--lvNGTS~gn~a~--i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~P 239 (720)
T PRK13578 170 LIHEGAAKDAQKHAAKVFNADKT------YF--VLNGTSASNKVV--TNALLTPGDLVLFDRNNHKSNHHGALIQAGATP 239 (720)
T ss_pred CCCChHHHHHHHHHHHHhCCCce------EE--EeCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHHcCCeE
Confidence 33456655556666666677533 33 689999998888 88899999999999999988777 488999999
Q ss_pred eeeeecCCCC----CCcChHh-----HHHHhhcCCCC-------cEEEEeCCCCCCC--CCCCCHHHHHHHHHH-HHhcC
Q 013839 168 RTYHYYDPDS----KSLDFAA-----LMDDIKNAPDS-------SFFLLHPSAHNPT--GVDPTEEQWREISYQ-FKVKG 228 (435)
Q Consensus 168 ~~v~~~~~~~----~~~d~e~-----l~~~i~~~~~~-------~~~v~~~~p~NPt--G~~~~~~~l~~i~~~-~~~~~ 228 (435)
++++.. -+. ++++.++ +++++.+.++. .+++++. ||| |++++. ++|++. ++.++
T Consensus 240 VYl~P~-~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit---~pTYdG~~ydi---~~I~~~~~h~~~ 312 (720)
T PRK13578 240 VYLETA-RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQ---LGTYDGTIYNA---RQVVDKIGHLCD 312 (720)
T ss_pred EEeecc-ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEE---CCCCcceeecH---HHHHHHhhccCC
Confidence 998542 222 3456555 88888765222 4777774 555 777654 578887 67778
Q ss_pred ceeeeeccCCCc-cCCCCcccHHHHH-HhhhcCCeEEEEecccccccccCCcccEE
Q 013839 229 HFPFFDMAYQGF-ASGDLDKDAQAIR-IFLEDEHLIGCAQSYAKSMGLYGHRVGCL 282 (435)
Q Consensus 229 ~~vi~Deay~~~-~~~~~~~~~~~~~-~~~~~~~~~i~~~s~SK~~g~~G~RvG~~ 282 (435)
+|++||||..+ .|.+.-.+.+... .......-++++.|.+|.+ +++--+.+
T Consensus 313 -~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~ 365 (720)
T PRK13578 313 -YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQ 365 (720)
T ss_pred -cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhh
Confidence 99999997543 3433211122221 1111123469999999997 44544433
No 335
>PRK12403 putative aminotransferase; Provisional
Probab=99.48 E-value=9.5e-11 Score=116.38 Aligned_cols=341 Identities=12% Similarity=0.059 Sum_probs=181.0
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCC--CCC-CCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEF--LES-ISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.+++..||+..|.-...-|. -.+++++++.+++..... ..+ .......+|-+.+++.+... -+.+. ++
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~--f~ 121 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGH------YSHAI--YT 121 (460)
T ss_pred CCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC------cCEEE--Ee
Confidence 35678999877742111222 223444444455432111 001 11122234444554443111 13566 89
Q ss_pred CCchhHHHHHHHHHHHh-----CCCC-EEEEcCCCChhhHH-HHhhCCCC-----------eeeeeecCC--CCCCc---
Q 013839 124 LSGTGACRLFAEFQRRF-----HPES-HIYFPDPTWSNHHN-IWRDAQIP-----------ERTYHYYDP--DSKSL--- 180 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~-----~~gd-~Vlv~~p~y~~~~~-~~~~~g~~-----------~~~v~~~~~--~~~~~--- 180 (435)
++|++|++.+..+.... .+++ .|+....+|.+... .+...|.. +..+|.... ..+.+
T Consensus 122 ~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 201 (460)
T PRK12403 122 NSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPA 201 (460)
T ss_pred CCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChH
Confidence 99999999997655443 2333 34555667766532 22222211 122221000 00011
Q ss_pred -----ChHhHHHHhhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHH
Q 013839 181 -----DFAALMDDIKN-APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIR 253 (435)
Q Consensus 181 -----d~e~l~~~i~~-~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 253 (435)
+.+++++.+.+ .+++..+|++.....-.|... +++.+++|.++|++||+++|.||+..+|+..+ ..+...
T Consensus 202 ~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~e 278 (460)
T PRK12403 202 EFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG---EWFAHE 278 (460)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhhhh
Confidence 13456555542 234567777776666667754 67889999999999999999999987776543 112222
Q ss_pred HhhhcCCeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHHHh----hccccCCChhHHHHHHHHhCChhhH
Q 013839 254 IFLEDEHLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQIA----RAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 254 ~~~~~~~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
.+ +... +|+ +++|.+| .|. .+|.+++ .++ +.+.+.... ...+.+.++++..++.+.|+.-.
T Consensus 279 ~~-gv~P-Div--~~gK~lg-gG~~Piga~v~---~~~----i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~-- 344 (460)
T PRK12403 279 HF-GFEP-DTL--SIAKGLT-SGYVPMGGLVL---SKR----IAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALR-- 344 (460)
T ss_pred hc-CCCC-CeE--EEccccc-ccccceEEEEE---CHH----HHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHH--
Confidence 22 2222 233 3899998 674 7887753 677 666554211 12345566777666666664211
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHh----hCCCCCccccccCcceeEecCC----------CH--H---HHHHHhhh
Q 013839 329 SLWIDEVKIMADRIQ-RKRTTLRQNLEK----LGSSLNWEHITNQLGMFCFSGL----------TP--Y---QVDRLAKE 388 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~-~~~~~l~~~l~~----~~~~~~~~~~~~~~g~~~~~~~----------~~--~---~~~~ll~~ 388 (435)
+ +...++.+ ++-+++.+.|++ .+. +......|. +.-+.+ +. + .+...+.+
T Consensus 345 ----~--~~l~~~~~~~~g~~l~~~L~~l~~~~~~---i~~vrG~Gl-~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (460)
T PRK12403 345 ----D--EGVVTRVKDDTGPYLQRCLREVFGDHPL---VGEVQGAGL-VAALQFAEDKATRKRFANENDLAWRCRTIGFE 414 (460)
T ss_pred ----h--ccHHHHHHHHHHHHHHHHHHHHHhcCCC---EEeEeecce-EEEEEEccCccccccccchhHHHHHHHHHHHh
Confidence 1 12334443 444555555543 321 122333333 332211 10 1 12222346
Q ss_pred ccEEEeCCC---cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 389 FHIYMTQDG---RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 389 ~gI~i~pgg---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
+|+.+.+.| |++.. ..++++++++++.|.++++++
T Consensus 415 ~Gll~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 415 EGVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred CCEEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 899998754 56543 238999999999999999765
No 336
>PRK06148 hypothetical protein; Provisional
Probab=99.48 E-value=2.9e-11 Score=130.47 Aligned_cols=342 Identities=14% Similarity=0.069 Sum_probs=188.0
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC-CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS-EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
.++...+|+..|.. . -| -..+.+++++.+++... ....|.. ....++-+.+++.+.+ . -+.+. ++++
T Consensus 621 ~dG~~ylD~~~g~~-~-lG-H~hp~v~~Ai~~q~~~l~~~~~~~~-~~~~~lAe~L~~~~p~-~-----~~~v~--f~nS 688 (1013)
T PRK06148 621 NRGRAYLDCFNNVC-H-VG-HAHPRVVAAAARQAARLNTNTRYLH-DAIVAYAERLTATLPD-G-----LTVAF--FVNS 688 (1013)
T ss_pred CCCCEEEEcccChh-h-cC-CCCHHHHHHHHHHHhhcCCcCCcCC-HHHHHHHHHHHHhCCC-C-----cCEEE--EeCC
Confidence 35677888877752 2 12 11233444444444321 1122321 2223444444444311 1 13566 8999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhh-CC-------C-----CeeeeeecCC--CCCCc-C-------h
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRD-AQ-------I-----PERTYHYYDP--DSKSL-D-------F 182 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~g-------~-----~~~~v~~~~~--~~~~~-d-------~ 182 (435)
|++|++++..+........+|+....+|.+....... .+ . .+..++..+. ..+.. + .
T Consensus 689 GsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 768 (1013)
T PRK06148 689 GSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFA 768 (1013)
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHH
Confidence 9999999976665554457889888888766432111 11 0 1111111000 00110 1 1
Q ss_pred HhHHHHhh---cCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhc
Q 013839 183 AALMDDIK---NAPDSSFFLLHPSAHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLED 258 (435)
Q Consensus 183 e~l~~~i~---~~~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 258 (435)
+.+++.+. ..+....+|++.....-.|.+ .+++.++++.++|++||+++|.||+..+|+-.+. ..+....+ +.
T Consensus 769 ~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~--~~~a~e~~-gv 845 (1013)
T PRK06148 769 ESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGS--HWWAFETQ-GV 845 (1013)
T ss_pred HHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCC--cchhhhhc-CC
Confidence 34554443 233457788776655555654 4788899999999999999999999888865431 12222222 22
Q ss_pred CCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh-hccccCCChhHHHHHHHHhCChhhHHHHHHHHHH
Q 013839 259 EHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA-RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKI 337 (435)
Q Consensus 259 ~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~ 337 (435)
.. + +-+++|.+| .|..+|.+++ .++ +.+.+..-. ...+.+.++++..++.+.|+.-. + +.
T Consensus 846 ~P-D--ivt~gK~lg-gG~Plgav~~---~~e----i~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~------~--e~ 906 (1013)
T PRK06148 846 VP-D--IVTMGKPIG-NGHPMGAVVT---TRE----IADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIE------D--ED 906 (1013)
T ss_pred Cc-c--eeeeccccc-CCcceEEEEE---cHH----HHhhccCCCccccCCCCCHHHHHHHHHHHHHHh------h--cc
Confidence 12 2 245799998 7899999864 777 766654321 13455667777777666664211 1 13
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCC-CccccccCcceeEecCC---------C---HHHHHHHhhhccEEEeCCC------c
Q 013839 338 MADRIQRKRTTLRQNLEKLGSSL-NWEHITNQLGMFCFSGL---------T---PYQVDRLAKEFHIYMTQDG------R 398 (435)
Q Consensus 338 ~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~---------~---~~~~~~ll~~~gI~i~pgg------R 398 (435)
..++.++.-++|.+.|+++.... .+......| +++-+.+ + ...+...+.++||.+.+.| |
T Consensus 907 l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~G-l~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr 985 (1013)
T PRK06148 907 LQRNALEIGNYLLAGLRELQDRFDIIGDVRGMG-LFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLK 985 (1013)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeeec-eEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEE
Confidence 44555566666666665542100 011222333 3332211 1 1223333346899998754 6
Q ss_pred EEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 399 ISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 399 is~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
|... ..+++++++++++|.+++.+.
T Consensus 986 ~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 986 IRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 6543 248999999999999998753
No 337
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.47 E-value=4.8e-11 Score=118.35 Aligned_cols=347 Identities=13% Similarity=0.062 Sum_probs=182.9
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++...||+..|.....-| -..+++++++.+++......... .-..+.+..+++.+...-........+. ..+++|
T Consensus 55 ~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~-f~~~SG 130 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALG-HNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQ-FTGPSG 130 (459)
T ss_pred CCCCEEEEcccchhhccCC-CCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEE-EeCCCc
Confidence 3678899998885211122 22234445555555422111110 0112344445555422111000001222 145899
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhC-C------------CCeeeeeecCCCC--CC----cChHhH--
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDA-Q------------IPERTYHYYDPDS--KS----LDFAAL-- 185 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~~~--~~----~d~e~l-- 185 (435)
++|.+.+..+.......++|+...-+|.+........ + ..+..+|..+... +. -+.+.+
T Consensus 131 sEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (459)
T PRK06931 131 ADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTY 210 (459)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHH
Confidence 9999999766655545578998998898775443321 1 0122222211100 00 012222
Q ss_pred --HHHhhc---CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcC
Q 013839 186 --MDDIKN---APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDE 259 (435)
Q Consensus 186 --~~~i~~---~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 259 (435)
++.+.+ .+++..++++...+.-.|... +++.++++.++|++||+++|.||+..+|+-.+ ..+....+ +..
T Consensus 211 ~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG---~~~a~~~~-gv~ 286 (459)
T PRK06931 211 YFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG---KMFAFEHA-GIE 286 (459)
T ss_pred HHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc---hHHHhhhc-CCC
Confidence 333321 224567777766555567654 78889999999999999999999998886543 12333222 222
Q ss_pred CeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 013839 260 HLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMA 339 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~ 339 (435)
..+ -+++|.++ .|..+|.++ + .++ + +.+.......+.+.++++..++.+.|+.-. + +...
T Consensus 287 PDi---vt~gK~l~-gG~Pi~av~--~-~~~----~-~~~~~~~~~~T~~gnpla~aaala~L~~l~------~--~~l~ 346 (459)
T PRK06931 287 PDI---IVMSKAVG-GGLPLAVLG--I-KKE----F-DAWQPGGHTGTFRGNQLAMATGLTTLKILK------E--ENLA 346 (459)
T ss_pred CCE---EEeccccc-CCcceeeee--e-HHH----H-hhccCCCCCCCCCCCHHHHHHHHHHHHHHH------h--CCHH
Confidence 223 34699998 788888764 2 443 2 333222223455677777777666664211 1 1233
Q ss_pred HHHHHHHHHHHHHHHhhC--CCCCccccccCcceeEecCC---------------CH---HHHHHHhhhccEEEeCCC--
Q 013839 340 DRIQRKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGL---------------TP---YQVDRLAKEFHIYMTQDG-- 397 (435)
Q Consensus 340 ~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~---------------~~---~~~~~ll~~~gI~i~pgg-- 397 (435)
++.++.-++|.+.|+++. .+ .+......|.++. +.+ +. ..+...+.++||.+.+.|
T Consensus 347 ~~~~~~G~~l~~~L~~l~~~~~-~i~~vrG~Glm~g-iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~ 424 (459)
T PRK06931 347 QNAAERGEWLKAQLAELQKRYP-CIGNVRGRGLMIG-IEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRN 424 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CeEeEecCceEEE-EEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCC
Confidence 444444555555554431 11 1222333333322 211 11 123333346899997653
Q ss_pred ----cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 398 ----RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 398 ----Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
|+..+ ..+++++++++++|.+++++.
T Consensus 425 ~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 425 GNVVRLLPPLLITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred CCEEEEECCCCcCHHHHHHHHHHHHHHHHHH
Confidence 65543 248999999999999998764
No 338
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.47 E-value=7.6e-12 Score=127.09 Aligned_cols=170 Identities=14% Similarity=0.110 Sum_probs=114.7
Q ss_pred CCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeee
Q 013839 90 SASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERT 169 (435)
Q Consensus 90 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 169 (435)
...|...--|..++.+++.+.+ .. +++|+|.++..+ +++.+.+||.|+++..++......+.+.|+++++
T Consensus 192 ~~~G~i~eAe~~AA~~fgAd~t------yf--vvNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 192 DHSGPHKEAEEYIARVFNADRS------YM--VTNGTSTANKIV--GMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred CCChHHHHHHHHHHHHhCCCcE------EE--EeCchHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence 3456655556666666677533 33 689999998888 8888999999999999998888899999999999
Q ss_pred eeecCCCC----CCcC-----hHhHHHHhhcCCCC--cEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeeeecc
Q 013839 170 YHYYDPDS----KSLD-----FAALMDDIKNAPDS--SFFLLHPSAHNPT--GVDPTEEQWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 170 v~~~~~~~----~~~d-----~e~l~~~i~~~~~~--~~~v~~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~vi~Dea 236 (435)
++.. -+. ++++ .+.+++++.+.+.. +..+++. ||| |++++. ++|.+.|+.++ +++|||
T Consensus 262 l~P~-rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit---~pTYdG~~yd~---~~I~~~~~~~~--ilvDEA 332 (714)
T PRK15400 262 FRPT-RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVIT---NSTYDGLLYNT---DFIKKTLDVKS--IHFDSA 332 (714)
T ss_pred eccc-ccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEE---CCCCccEecCH---HHHHHHhCCCC--EEEEcc
Confidence 8542 222 2345 89999999876432 2256664 555 777765 47777787776 689999
Q ss_pred CCCc-cCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCccc
Q 013839 237 YQGF-ASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVG 280 (435)
Q Consensus 237 y~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG 280 (435)
|..+ .|.+.-++..++....+..+.++++.|.+|.+ +++.-+
T Consensus 333 wgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQa 375 (714)
T PRK15400 333 WVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQA 375 (714)
T ss_pred chhhhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHH
Confidence 8554 34332112233332222224569999999997 344433
No 339
>PRK06149 hypothetical protein; Provisional
Probab=99.46 E-value=3.7e-11 Score=129.54 Aligned_cols=340 Identities=10% Similarity=0.023 Sum_probs=185.1
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCC-CCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFL-ESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
++...+|+..|.. .. | -..+++++++.+++...... .|. .....+|.+.+++.+-. . .+.+. ++++|
T Consensus 583 dG~~ylD~~~~~~-~l-G-h~hp~v~~Ai~~q~~~l~~~~~~~-~~~~~elae~L~~~~p~-~-----~~~v~--f~~SG 650 (972)
T PRK06149 583 AGRSYLDMVNNVT-VL-G-HGHPRLAAAAARQWSLLNTNSRFH-YAAVAEFSERLAALAPD-G-----LDTVF--LVNSG 650 (972)
T ss_pred CCCEEEECCCCcc-cc-C-CCCHHHHHHHHHHHHhcccccccc-CHHHHHHHHHHHHhCCC-C-----cCEEE--EeCCc
Confidence 5678888887652 21 1 12234444444555422111 121 11233455555544411 1 23566 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhC-C-------C------CeeeeeecCCC--CCC-cC-----hHh
Q 013839 127 TGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDA-Q-------I------PERTYHYYDPD--SKS-LD-----FAA 184 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g-------~------~~~~v~~~~~~--~~~-~d-----~e~ 184 (435)
++|++.+..+........+|+..+-+|.+........ + . .+..++..+.. .+. .+ .++
T Consensus 651 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~ 730 (972)
T PRK06149 651 SEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRD 730 (972)
T ss_pred hHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHH
Confidence 9999999765554544477888888887654221100 0 0 01122210000 011 11 234
Q ss_pred HHHHhh---cCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCC
Q 013839 185 LMDDIK---NAPDSSFFLLHPSAHNPTGV-DPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEH 260 (435)
Q Consensus 185 l~~~i~---~~~~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 260 (435)
+++.++ +.+.+..+|++.......|. ..+++.++++.++|++||+++|.||+..+|+-.+ ...+....+ +...
T Consensus 731 ~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG--~~~~a~e~~-gv~P 807 (972)
T PRK06149 731 VVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG--HYFWGFEQQ-GVVP 807 (972)
T ss_pred HHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC--ccchhhhhc-CCCC
Confidence 444332 23345677777654444454 4578889999999999999999999987876543 112233222 2222
Q ss_pred eEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh-hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHH
Q 013839 261 LIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA-RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMA 339 (435)
Q Consensus 261 ~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~ 339 (435)
.++ +++|.+| .|..+|.+++ +++ +.+.+.... ...+.+.++++..++.+.|+.-. + +...
T Consensus 808 Div---t~gK~lg-~G~Pl~av~~---~~~----i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~------~--e~l~ 868 (972)
T PRK06149 808 DII---TMAKGMG-NGHPLGAVIT---RRE----IAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLR------E--EKLQ 868 (972)
T ss_pred CEE---Eeccccc-CCeeeEEEEE---cHH----HHhhhccCCcccCCCCCCHHHHHHHHHHHHHHH------h--cCHH
Confidence 232 6899998 7888999864 777 766665311 12234566776666666664211 1 2344
Q ss_pred HHHHHHHHHHHHHHHhhCCCC-CccccccCcceeEecCC---------C---HHHHHHHhhhccEEEeCCC------cEE
Q 013839 340 DRIQRKRTTLRQNLEKLGSSL-NWEHITNQLGMFCFSGL---------T---PYQVDRLAKEFHIYMTQDG------RIS 400 (435)
Q Consensus 340 ~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~---------~---~~~~~~ll~~~gI~i~pgg------Ris 400 (435)
++.++.-++|.+.|+++.... .+......| ++.-+.+ + ...+...+.++||.+.+.| ||.
T Consensus 869 ~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~G-l~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~ 947 (972)
T PRK06149 869 ENARRVGDHLKARLEALADRHPLIGAVHGMG-LYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIK 947 (972)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEeecc-eEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEE
Confidence 555555566666665542100 112233333 3332211 1 1233333456899999875 444
Q ss_pred ec-cCCCCcHHHHHHHHHHHHHh
Q 013839 401 MA-GVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 401 ~~-~~~~e~i~~~~~~l~~~l~~ 422 (435)
.. ..+++++++++++|.+++.+
T Consensus 948 Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 948 PPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHh
Confidence 32 24899999999999999864
No 340
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.46 E-value=6.5e-11 Score=116.99 Aligned_cols=280 Identities=13% Similarity=0.104 Sum_probs=157.3
Q ss_pred CCeeeEecCCchhHHHHHHHHHHHhC------CC------CEEEEcCCCChhhHHHHhh-CCCCe-----------eeee
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRRFH------PE------SHIYFPDPTWSNHHNIWRD-AQIPE-----------RTYH 171 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~~~------~g------d~Vlv~~p~y~~~~~~~~~-~g~~~-----------~~v~ 171 (435)
+++. ++++|++|++.+.++..... .| .+|+....+|.+....... .|... ..++
T Consensus 111 ~~v~--f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~ 188 (443)
T PRK08297 111 PHLF--FVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRID 188 (443)
T ss_pred CEEE--EeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccC
Confidence 4677 99999999999976654331 12 5799899888777543322 12100 0011
Q ss_pred ecC------CCC-------CCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccC
Q 013839 172 YYD------PDS-------KSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAY 237 (435)
Q Consensus 172 ~~~------~~~-------~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay 237 (435)
... ..+ ..-+++++++.+.+.+++..++++...+.-.|.. .+++.+++|.++|++||+++|.||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~ 268 (443)
T PRK08297 189 NPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQ 268 (443)
T ss_pred CCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 000 000 0013455667776555677888887665556665 67889999999999999999999999
Q ss_pred CCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHH-HHH-HHhhccccCCChhHH
Q 013839 238 QGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRS-QIQ-QIARAMYGSPPVHGI 315 (435)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~-~l~-~~~~~~~~~~~~~~q 315 (435)
.+|+..+ ..+....+ +....++ +++|.+++ | |.+. ..+ ...+.. .+. ......+.+.+.++.
T Consensus 269 tGfGRtG---~~~a~~~~-gv~PDiv---~~gK~l~~-~---a~l~----~~~-i~~~~~~~~~~~~~~~~T~~gnpl~~ 332 (443)
T PRK08297 269 TGVGLTG---TAWAYQQL-GVRPDIV---AFGKKTQV-C---GIMA----GRR-VDEVEDNVFAVSSRINSTWGGNLVDM 332 (443)
T ss_pred hccCccc---hHHHHHhc-CCCCCEE---Eecccccc-c---ceec----chH-HHHhhhhhccCccccCCCCCccHHHH
Confidence 8886543 12222222 2222233 47998742 2 3332 333 111111 111 011234556677776
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCCCccccccCcceeEecCC-C---H-HHHHHHhhh
Q 013839 316 LLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGL-T---P-YQVDRLAKE 388 (435)
Q Consensus 316 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~-~---~-~~~~~ll~~ 388 (435)
.++.+.|+.-. + ....++.++..+.+.+.|+++. .+......... |.+..+.+ + . .+...+ .+
T Consensus 333 aaa~a~L~~l~------~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~l-~~ 402 (443)
T PRK08297 333 VRARRILEVIE------E--DGLVENAARQGEYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTTADRDEVIRRL-WE 402 (443)
T ss_pred HHHHHHHHHHH------h--cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCHHHHHHHHHHH-HH
Confidence 66666664211 1 1334445555555555555432 11011122333 44444433 2 2 234555 46
Q ss_pred ccEEEeCCC----cEEec-cCCCCcHHHHHHHHHHHHHhh
Q 013839 389 FHIYMTQDG----RISMA-GVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 389 ~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~l~~~ 423 (435)
+||.+.|.| ||+.+ ..+++++++++++|.++++++
T Consensus 403 ~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 403 EGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 899999865 67532 248999999999999988754
No 341
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.45 E-value=4.7e-11 Score=121.40 Aligned_cols=174 Identities=8% Similarity=0.009 Sum_probs=113.5
Q ss_pred CCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeee
Q 013839 90 SASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERT 169 (435)
Q Consensus 90 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 169 (435)
...|...--|..++.+++.+.+ .. +++|+|.++..+ +++.+.+||+|+++..++......+.+.|+++++
T Consensus 192 ~~~G~i~eAe~~aA~~fgAd~t------yf--vvNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVY 261 (713)
T PRK15399 192 DHTGPHLEAEEYIARTFGAEQS------YI--VTNGTSTSNKIV--GMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIW 261 (713)
T ss_pred CCChHHHHHHHHHHHHhCCCcE------EE--EeCChHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEE
Confidence 3456555555666666677533 33 689999998888 8888999999999999998888899999999999
Q ss_pred eeecCCCC----CCcCh-----HhHHHHhhcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCcee-eeeccC
Q 013839 170 YHYYDPDS----KSLDF-----AALMDDIKNAPD--SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFP-FFDMAY 237 (435)
Q Consensus 170 v~~~~~~~----~~~d~-----e~l~~~i~~~~~--~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~v-i~Deay 237 (435)
++.. -+. ++++. +.+++++.+.+. +++++++.+| +=-|++++.+ +|.+.| |+.+ ++||||
T Consensus 262 l~P~-~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~---~I~~~~---g~~~ilvDEAh 333 (713)
T PRK15399 262 LKPT-RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTD---WIKQTL---DVPSIHFDSAW 333 (713)
T ss_pred eccc-ccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHH---HHHHHh---CCCEEEEeccc
Confidence 8542 122 34555 899999987642 2356666444 2238887666 555555 5555 699998
Q ss_pred CCc-cCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEE
Q 013839 238 QGF-ASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLS 283 (435)
Q Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~ 283 (435)
..+ .|.+...+..++.........++++.|.+|.+ +++.-+.++
T Consensus 334 gah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~i 378 (713)
T PRK15399 334 VPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLI 378 (713)
T ss_pred hhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheee
Confidence 543 34332122223321111223456789999997 456545444
No 342
>PRK07483 hypothetical protein; Provisional
Probab=99.45 E-value=1.4e-10 Score=114.56 Aligned_cols=346 Identities=11% Similarity=0.075 Sum_probs=185.1
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.+++..||+..|.-...-| ...+.+++++.+++...... ....-..+....+++.+...-.. ..+++. ++++|
T Consensus 27 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~av~~ql~~~~~~--~~~~~~~~~~~~lae~L~~~~p~--~~~~v~--f~~sG 99 (443)
T PRK07483 27 ATGKRYLDASGGAAVSCLG-HSHPRVIAAIHAQIDRLAYA--HTSFFTTEPAEALADRLVAAAPA--GLEHVY--FVSGG 99 (443)
T ss_pred CCCCEEEEcCccHhhhccC-CCCHHHHHHHHHHHHhccCc--cccccCCHHHHHHHHHHHHhCCC--CCCEEE--EcCCc
Confidence 4678899998874211112 12233444444444322100 00000112334444444221100 024677 89999
Q ss_pred hhHHHHHHHHHHHhC-----CC-CEEEEcCCCChhhHHHHhh-CCC------------CeeeeeecCC-CCC--Cc----
Q 013839 127 TGACRLFAEFQRRFH-----PE-SHIYFPDPTWSNHHNIWRD-AQI------------PERTYHYYDP-DSK--SL---- 180 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~-~~~--~~---- 180 (435)
++|++.+..+..... +| .+|+....+|.+....... .|- .+..++.... ++. ..
T Consensus 100 sEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (443)
T PRK07483 100 SEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEA 179 (443)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHH
Confidence 999999986655541 33 5788888888776432211 110 1111221000 000 00
Q ss_pred ----ChHhHHHHhhc-CCCCcEEEEeCCCCC-CCCC-CCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHH
Q 013839 181 ----DFAALMDDIKN-APDSSFFLLHPSAHN-PTGV-DPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIR 253 (435)
Q Consensus 181 ----d~e~l~~~i~~-~~~~~~~v~~~~p~N-PtG~-~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 253 (435)
.++++++.+.+ .+++..+|++...+. -.|. ..+++.++++.++|++||+++|.||+..+|+..+ ..+...
T Consensus 180 ~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG---~~~a~~ 256 (443)
T PRK07483 180 YGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG---TLFACE 256 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc---HHHHHh
Confidence 12566665542 234567777765543 2354 4578889999999999999999999988886543 123332
Q ss_pred HhhhcCCeEEEEecccccccccCC-cccEEEEEecChhHHHHHHHHHHHH----hhccccCCChhHHHHHHHHhCChhhH
Q 013839 254 IFLEDEHLIGCAQSYAKSMGLYGH-RVGCLSILCVDSKQAAAIRSQIQQI----ARAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 254 ~~~~~~~~~i~~~s~SK~~g~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
.+ +....++ +++|.++ .|. .+|.+++ +++ +.+.+... ....+.+.++++..++.+.|+.-.
T Consensus 257 ~~-gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~~----i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~-- 322 (443)
T PRK07483 257 ED-GVAPDLV---TIAKGLG-AGYQPIGAVLA---SDR----IYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIA-- 322 (443)
T ss_pred hc-CCCCCee---eehhhhc-cCccccEEEEE---cHH----HHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHH--
Confidence 22 2222233 3699998 785 8888864 777 66655431 112455667777666666664211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCCCccccccCcceeEecCC----------C-----HHHHHHHhhhccE
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQNLEKL--GSSLNWEHITNQLGMFCFSGL----------T-----PYQVDRLAKEFHI 391 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~g~~~~~~~----------~-----~~~~~~ll~~~gI 391 (435)
+ ....++.++.-++|.+.|+++ ..+ .+......|-++. +.+ + .+.+...+.++||
T Consensus 323 ----~--~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vRG~Glm~g-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl 394 (443)
T PRK07483 323 ----E--DGLLANVRARGEQLRARLRERLGQHP-HVGDIRGRGLFVG-VELVADRATKAPFDPALKLHARIKREAMARGL 394 (443)
T ss_pred ----h--cCHHHHHHHHHHHHHHHHHHHHhcCC-CeeeEeecccEEE-EEEeecccccCCCCchhhHHHHHHHHHHHCCc
Confidence 1 234445555556666666543 111 1122233333222 211 1 1233333356899
Q ss_pred EEeCC--------C---cEEec-cCCCCcHHHHHHHHHHHHHhhh
Q 013839 392 YMTQD--------G---RISMA-GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 392 ~i~pg--------g---Ris~~-~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
.+.+. | ||... ..+++++++++++|.+++.+..
T Consensus 395 l~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 395 MVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred EEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99753 2 66532 3489999999999999997644
No 343
>PLN02880 tyrosine decarboxylase
Probab=99.44 E-value=1.7e-10 Score=115.10 Aligned_cols=332 Identities=14% Similarity=0.083 Sum_probs=192.0
Q ss_pred cccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCC------eeeEecCCchhHHHHHHHHHH--
Q 013839 67 PVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGR------SAGVQALSGTGACRLFAEFQR-- 138 (435)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~------v~~~~t~gg~~a~~~~~~~~~-- 138 (435)
+.+...+.+.+....+.....|....+..++-+.+.+|+...-+. ++. -.+.+|.||++|+..++....
T Consensus 93 ~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~---p~~~~~~~~~gG~~tsggs~anl~al~~AR~~ 169 (490)
T PLN02880 93 SSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNL---PEQFLSTGNGGGVIQGTASEAVLVVLLAARDR 169 (490)
T ss_pred CcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCC---CchhhcCCCCceEEcCccHHHHHHHHHHHHHH
Confidence 334455555555544433444554455667777777777322211 111 124579999999866642221
Q ss_pred HhC-------CCCEEEEcCCCChhhHHHHhhCCCC---eeeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCC
Q 013839 139 RFH-------PESHIYFPDPTWSNHHNIWRDAQIP---ERTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAH 205 (435)
Q Consensus 139 ~~~-------~gd~Vlv~~p~y~~~~~~~~~~g~~---~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~ 205 (435)
.+. +.-.|++.+-++......+...|+. ++.||+.+..++.+|++.|++++.+. ...+.+|+-+...
T Consensus 170 ~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGT 249 (490)
T PLN02880 170 VLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGT 249 (490)
T ss_pred HHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCC
Confidence 111 1124556777788888888999984 67788732346789999999999742 3346777777888
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh-hhcCCeEEEEecccccccccCCcccEEEE
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF-LEDEHLIGCAQSYAKSMGLYGHRVGCLSI 284 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~SK~~g~~G~RvG~~~~ 284 (435)
.+||.+-+ +++|.++|++||+|+.+|.+|.++.... +..+.. .+...-+-+..+++|.+. ....+|.+.+
T Consensus 250 T~~GaiDp---l~eI~~i~~~~~iwlHVDaA~gg~~~~~-----~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llv 320 (490)
T PLN02880 250 TSSTAVDP---LLELGKIAKSNGMWFHVDAAYAGSACIC-----PEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWV 320 (490)
T ss_pred CcCcccCc---HHHHHHHHHHcCCEEEEehhhHHHHHhC-----HHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEE
Confidence 89998755 5699999999999999999987764321 122211 122234577889999986 5577787763
Q ss_pred EecChhHHHHHHHHHHHHhhccc---------c--------CCC---hhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 013839 285 LCVDSKQAAAIRSQIQQIARAMY---------G--------SPP---VHGILLVATILSDPNLKSLWIDEVKIMADRIQR 344 (435)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~~~~~---------~--------~~~---~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~ 344 (435)
.+... +...+.....+.. . ... .+..++....+.. +.+.++.++..+
T Consensus 321 --r~~~~---l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~--------~g~~~~i~~~~~ 387 (490)
T PLN02880 321 --KDRNA---LIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGV--------ENLQSYIRNHIK 387 (490)
T ss_pred --eCHHH---HHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCH--------HHHHHHHHHHHH
Confidence 34331 2222211110000 0 000 1111111122221 334455555557
Q ss_pred HHHHHHHHHHhhCCCCCccccc-cCcceeEec--C--CC--------HHHHHHHhhhccEEEeCC---C----cEEeccC
Q 013839 345 KRTTLRQNLEKLGSSLNWEHIT-NQLGMFCFS--G--LT--------PYQVDRLAKEFHIYMTQD---G----RISMAGV 404 (435)
Q Consensus 345 ~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~--~--~~--------~~~~~~ll~~~gI~i~pg---g----Ris~~~~ 404 (435)
.++++.+.+++.+. +.... +..++..|- + .+ .+..+++.++..+.+.+. | |+++.+.
T Consensus 388 lA~~~~~~l~~~~~---~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~ 464 (490)
T PLN02880 388 LAKEFEQLVAQDSR---FEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAP 464 (490)
T ss_pred HHHHHHHHHhcCCC---EEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCC
Confidence 77888888876542 44433 344433332 1 11 123355555566666643 3 9987553
Q ss_pred --CCCcHHHHHHHHHHHHHhhhhh
Q 013839 405 --TTGNVNYLANAIHEVTRSEQET 426 (435)
Q Consensus 405 --~~e~i~~~~~~l~~~l~~~~~~ 426 (435)
+.++++.+++.|.++.+++.++
T Consensus 465 ~tt~~di~~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 465 LTEERHVTAAWKVLQDEASKLLGK 488 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4588999999999888776544
No 344
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.43 E-value=1e-10 Score=115.46 Aligned_cols=328 Identities=13% Similarity=0.153 Sum_probs=173.5
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCc
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSG 126 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg 126 (435)
.++...||+..|.-...-| ...+.+++++.+++....... .+.....++.+.+++...+ .+.+. ++++|
T Consensus 45 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~la~~l~~~~p~-------~~~v~--f~~sG 113 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLG-HAYPPVVEAVREALQDGCNFT-RPSAIELDAAESFLELIDG-------ADMVK--FCKNG 113 (431)
T ss_pred CCCCEEEEccccccchhcC-CCCHHHHHHHHHHHHhCcCCC-CCCHHHHHHHHHHHHhCCc-------cceEE--EecCH
Confidence 4678899998775211122 222344555555554332221 1222222455555555421 13666 89999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEc-CCCChhhHHHHh-----hCCCC--e--eeeeecCCCCCCcChHhHHHHhhcCCCCc
Q 013839 127 TGACRLFAEFQRRFHPESHIYFP-DPTWSNHHNIWR-----DAQIP--E--RTYHYYDPDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 127 ~~a~~~~~~~~~~~~~gd~Vlv~-~p~y~~~~~~~~-----~~g~~--~--~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
++|++.+..+........+|+.. .-+|........ ..|.. . ..+.. . --|++.+++.+.+.+.+.
T Consensus 114 seA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~d~~~l~~~l~~~~~~~ 188 (431)
T PRK06209 114 SDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF--R---YNDIASLEALFEDHPGRI 188 (431)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc--C---CCCHHHHHHHHHhCCCCE
Confidence 99999997665544332455544 223322111100 00110 0 01111 1 127899999887544456
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccC
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYG 276 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G 276 (435)
.+|++.. -.|...+.+.+++|.++|++||+++|+||+..++.... .......+... + +.+++|.+| .|
T Consensus 189 aavi~Ep---v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-----~g~~~~~gv~P-D--i~t~gK~lg-gG 256 (431)
T PRK06209 189 ACVILEP---ATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-----RGAQKLYGIVP-D--LSCFGKALG-NG 256 (431)
T ss_pred EEEEEcc---ccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-----chhhHHhCCCc-c--eeeehhhhc-CC
Confidence 6666643 23557788899999999999999999999986664321 11221112111 2 366899998 67
Q ss_pred CcccEEEEEecChhHHHHHHHH--HHHH--h----hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 013839 277 HRVGCLSILCVDSKQAAAIRSQ--IQQI--A----RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTT 348 (435)
Q Consensus 277 ~RvG~~~~~~~~~~~~~~~~~~--l~~~--~----~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 348 (435)
..+|.+++ +++ +.+. +... . ...+.++++++..++.+.|+.-. + +...++..++.++
T Consensus 257 ~p~~av~~---~~~----i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~------~--~~~~~~~~~~g~~ 321 (431)
T PRK06209 257 FAVSALAG---KRE----YMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYR------D--EDVIERLHEQGAK 321 (431)
T ss_pred cccEEEEE---HHH----HHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHh------c--cCHHHHHHHHHHH
Confidence 88888864 777 6654 2111 1 12234445555555555543210 1 1233444444455
Q ss_pred HHHHHHh----hCCCCCccccccCcceeE--ec--C---C-CHH---HH-HHHhhhccEEEeCCCcEEeccCCCCcHHHH
Q 013839 349 LRQNLEK----LGSSLNWEHITNQLGMFC--FS--G---L-TPY---QV-DRLAKEFHIYMTQDGRISMAGVTTGNVNYL 412 (435)
Q Consensus 349 l~~~l~~----~~~~~~~~~~~~~~g~~~--~~--~---~-~~~---~~-~~ll~~~gI~i~pggRis~~~~~~e~i~~~ 412 (435)
+++.|++ ++... .....+.+.. ++ + . ... .+ ..+ .++||.+.| -+|+. ..++++|+++
T Consensus 322 l~~~L~~~~~~~~~~~---~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~p~-l~is~-~ht~~dId~~ 395 (431)
T PRK06209 322 LAAGVNEAAAEHGLQD---HVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQET-IRRGVLMPS-LVVSY-AHGDADIERT 395 (431)
T ss_pred HHHHHHHHHHhCCCCe---EEEeecceEEEEEecCCcccCCcHHHHHHHHHHH-HHCCccccc-ccccc-cCCHHHHHHH
Confidence 5555543 44211 1111222222 11 1 1 111 23 444 468998743 25554 3489999999
Q ss_pred HHHHHHHHHhh
Q 013839 413 ANAIHEVTRSE 423 (435)
Q Consensus 413 ~~~l~~~l~~~ 423 (435)
+++|.++++..
T Consensus 396 l~~l~~~l~~~ 406 (431)
T PRK06209 396 IDAVHGALGVY 406 (431)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 345
>PLN02263 serine decarboxylase
Probab=99.42 E-value=2.6e-10 Score=111.17 Aligned_cols=295 Identities=11% Similarity=0.028 Sum_probs=183.5
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeee
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHY 172 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 172 (435)
+..++-+.+.+|+...-+. .+++..+.+|+|||+|+..+....+-..+...|++++-++......++.+|++++.||.
T Consensus 130 ~s~~~E~~Vi~wla~L~g~--p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~ 207 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEI--EKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDT 207 (470)
T ss_pred hHHHHHHHHHHHHHHHhCC--CCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEecc
Confidence 4567777777776322111 02234466899999998777433333334457888888888899999999999999998
Q ss_pred cCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCc-----eeeeeccCCCccCCCCcc
Q 013839 173 YDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGH-----FPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 173 ~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~-----~vi~Deay~~~~~~~~~~ 247 (435)
.+++.+|++.|++++.++..++.+|+.+.+..++|.+ +++++|.++|+++|+ |+-+|.+|.++...-.+
T Consensus 208 --d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~- 281 (470)
T PLN02263 208 --LVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVK- 281 (470)
T ss_pred --CCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcc-
Confidence 3567999999999998654456777778888999976 667799999999996 99999999776532110
Q ss_pred cHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhc-----cccCCCh-----hHHHH
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARA-----MYGSPPV-----HGILL 317 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~-----~~q~~ 317 (435)
..+.+ .+. ..-.=+.-+.+|.++ ....+|.+.. ... ..+.+.....+ .+...+. +..++
T Consensus 282 ~~~~~-df~--~~vDSIsvD~HK~l~-~P~~cgvll~---R~~----~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 282 RAPKV-TFK--KPIGSVSVSGHKFVG-CPMPCGVQIT---RME----HINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 350 (470)
T ss_pred ccccc-CCC--cCccEEEECCccccC-CCcCEEEEEE---ehh----hHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence 11011 111 112234557889987 4477787753 333 22222111100 0111122 22222
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecCCCHHHHHHHhhhccEEEeCCC
Q 013839 318 VATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSGLTPYQVDRLAKEFHIYMTQDG 397 (435)
Q Consensus 318 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~~gI~i~pgg 397 (435)
....++. +..++..++..++++++.+.+++.|. .....|......|...+.+. . .+|..+..-+
T Consensus 351 ~L~~~G~--------~G~~~~i~~~~~~A~~l~~~l~~~g~---~~~~~p~s~~V~f~~p~~~~----~-~~gW~L~~~~ 414 (470)
T PLN02263 351 TLNRKGY--------RGFQKEVQKCLRNAHYLKDRLREAGI---SAMLNELSSTVVFERPKDEE----F-VRRWQLACQG 414 (470)
T ss_pred HHHHhCH--------HHHHHHHHHHHHHHHHHHHHHHhCCC---eEEeCCCceEEEEecCchHH----h-hcceEEccCC
Confidence 2222221 45666777777888889999988874 23445555544444333221 1 2355554443
Q ss_pred ---cEEecc-CCCCcHHHHHHHHHHHHHh
Q 013839 398 ---RISMAG-VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 398 ---Ris~~~-~~~e~i~~~~~~l~~~l~~ 422 (435)
++.+.. .+.+.++++++.|++..+.
T Consensus 415 ~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 415 NIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 777654 4668899999999887663
No 346
>PLN02590 probable tyrosine decarboxylase
Probab=99.42 E-value=2.6e-10 Score=113.99 Aligned_cols=333 Identities=14% Similarity=0.095 Sum_probs=194.4
Q ss_pred cccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCcc---ccCCCeeeEecCCchhHHHHHHHHHHH--hC
Q 013839 67 PVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDV---VKEGRSAGVQALSGTGACRLFAEFQRR--FH 141 (435)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~---~~~~~v~~~~t~gg~~a~~~~~~~~~~--~~ 141 (435)
+.+...+-+++....+.....|....+..++-+.+.+|+...-+.+ .....-.+.+++||++|+..++....- +.
T Consensus 141 ~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~ 220 (539)
T PLN02590 141 TSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILK 220 (539)
T ss_pred CcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHh
Confidence 3444555555555554434556666677788888888873222211 000012355799999998665322111 11
Q ss_pred -------CCCEEEEcCCCChhhHHHHhhCCC---CeeeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCCCCC
Q 013839 142 -------PESHIYFPDPTWSNHHNIWRDAQI---PERTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAHNPT 208 (435)
Q Consensus 142 -------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~NPt 208 (435)
+.-.|++.+-++......+...|+ +++.||+....++.+|++.|++++.+. ...+.+|+-+....+|
T Consensus 221 ~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~t 300 (539)
T PLN02590 221 KVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSS 300 (539)
T ss_pred hhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence 112455667778888888888888 478888732246899999999999753 2346777777788888
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhh-hcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFL-EDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
|.+ +++++|.++|++|++|+.+|.+|.++..-- +..+.+. +...-.=+....+|.+. ...-+|.+. ..
T Consensus 301 Gai---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~-----~~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~ll--vr 369 (539)
T PLN02590 301 AAV---DPLVPLGNIAKKYGIWLHVDAAYAGNACIC-----PEYRKFIDGIENADSFNMNAHKWLF-ANQTCSPLW--VK 369 (539)
T ss_pred ccc---CCHHHHHHHHHHhCCeEEEecchhhhhhcC-----hhhHHHhcCCccCCEEEECchhhcC-cCcCEEEEE--ec
Confidence 875 667899999999999999999998766321 1222221 22223445667899987 446677775 33
Q ss_pred ChhHHHHHHHHHHHHhhcc----------------ccCCC-h---hHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 013839 288 DSKQAAAIRSQIQQIARAM----------------YGSPP-V---HGILLVATILSDPNLKSLWIDEVKIMADRIQRKRT 347 (435)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~----------------~~~~~-~---~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 347 (435)
++.. +.+.+.....+. ....+ . +-.+++...+. .+.+++..++..+.++
T Consensus 370 ~~~~---l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G--------~~G~~~~i~~~~~lA~ 438 (539)
T PLN02590 370 DRYS---LIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYG--------SENLRNFIRDHVNLAK 438 (539)
T ss_pred CHHH---HHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHH
Confidence 4432 222221100000 00111 1 11112222222 1456677777788888
Q ss_pred HHHHHHHhhCCCCCccccc-cCcceeEec--C--CC--------HHHHHHHhhhccEEEeCC---C----cEEecc--CC
Q 013839 348 TLRQNLEKLGSSLNWEHIT-NQLGMFCFS--G--LT--------PYQVDRLAKEFHIYMTQD---G----RISMAG--VT 405 (435)
Q Consensus 348 ~l~~~l~~~~~~~~~~~~~-~~~g~~~~~--~--~~--------~~~~~~ll~~~gI~i~pg---g----Ris~~~--~~ 405 (435)
++.+.+++.+. +.... ++-+...|- . .+ .+..+++.++-.+.+.+. | |+++++ .+
T Consensus 439 ~~~~~l~~~~~---fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~ 515 (539)
T PLN02590 439 HFEDYVAQDPS---FEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTE 515 (539)
T ss_pred HHHHHHhcCCC---eEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCC
Confidence 88888877642 44433 343333332 1 11 123345544444555543 3 998865 36
Q ss_pred CCcHHHHHHHHHHHHHhhh
Q 013839 406 TGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 406 ~e~i~~~~~~l~~~l~~~~ 424 (435)
+++++.+++.|.+...++.
T Consensus 516 ~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 516 EKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 7889999999988766544
No 347
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=5.8e-12 Score=117.37 Aligned_cols=368 Identities=15% Similarity=0.119 Sum_probs=208.5
Q ss_pred hhHHHHHhhhhhhhcccccc---ccccccccCCCCCCchhhHHHHHhcCCCCCeeeeecceecCCCCC-cccchHHHHHH
Q 013839 2 YWRYLTRAARRCSVHTTSSR---TVGWWDHVAPAAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGR-PVVLQCVREAE 77 (435)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~-~~~~~~~~~~~ 77 (435)
|.||+-|+++-|+---+.+. .+-.-++++-.-. ..|+.. .+....+||++=+|..+.-. .+..+...+++
T Consensus 91 Y~Rriy~ri~Dc~~RPi~~VPG~~v~l~dR~S~D~n-~tfk~t-----G~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~ 164 (519)
T KOG1357|consen 91 YSRRIYRRIRDCFERPICSVPGAWVDLMDRVSDDYN-WTFKYT-----GTRSRCLNLGSYNYLGFAQSVGPCAEASLKSF 164 (519)
T ss_pred HHHHHHHHHhHhhcCCCcCCCCceEEeeeeeccCCC-ceEEec-----cceeeeeeecccccccccccCCcCChHHHHHH
Confidence 78999999999984433222 1222222222111 111111 12235667666555333221 12233444444
Q ss_pred HHhc---CCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCh
Q 013839 78 AKIA---GSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWS 154 (435)
Q Consensus 78 ~~~~---~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~ 154 (435)
.... .+....-+...-+.++.+.+|+++ +. ++-++ ..=|-++.... +-.++.||.-|+-..--+.
T Consensus 165 ~kygl~~css~~e~G~~~~hkelE~l~A~f~-g~------e~a~v---F~mGf~TNs~~--~p~l~~~gsLIiSDelNHa 232 (519)
T KOG1357|consen 165 DKYGLSRCSSRHEAGTTEEHKELEELVARFL-GV------EDAIV---FSMGFATNSMN--IPSLLGKGSLIISDELNHA 232 (519)
T ss_pred HHhcccccccchhcccHHHHHHHHHHHHHhc-CC------cceEE---EeccccccccC--cceeecCCcceeeccccch
Confidence 4443 111222222233456777777776 33 33344 33344444444 6667889988888777666
Q ss_pred hhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC---------CCCcE-EEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 013839 155 NHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA---------PDSSF-FLLHPSAHNPTGVDPTEEQWREISYQF 224 (435)
Q Consensus 155 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~---------~~~~~-~v~~~~p~NPtG~~~~~~~l~~i~~~~ 224 (435)
....-++..|+.+..+.. + |.++||+.++++ ++-.+ ++++..-..--|. ..++.+++.++
T Consensus 233 Si~~GaRLSgAtiRVfkH---N----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~---iv~Lp~vvalk 302 (519)
T KOG1357|consen 233 SLITGARLSGATTRVFRH---N----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGT---IVDLPEVVALK 302 (519)
T ss_pred heeccccccCceEEEEec---C----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCe---ecccHHHHHhh
Confidence 666667888888877654 2 566777776652 11123 3333322223333 44677999999
Q ss_pred HhcCceeeeeccCCCccCCCCcccHHHHHHh--hhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHH
Q 013839 225 KVKGHFPFFDMAYQGFASGDLDKDAQAIRIF--LEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI 302 (435)
Q Consensus 225 ~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~ 302 (435)
+++.++++.||++..-.-+. .......+ .+..+.+|.+++|+|.+|..| ||+. ++++ +++.++..
T Consensus 303 kkykayl~lDEAHSiGA~g~---tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyia---gsk~----lid~lrt~ 369 (519)
T KOG1357|consen 303 KKYKAYLYLDEAHSIGAMGA---TGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIA---GSKE----LIDYLRTP 369 (519)
T ss_pred ccccEEEEeeccccccccCC---CCcceeeccCCCchhheeecceehhhccccc---ceec---CcHH----HHhhhccC
Confidence 99999999999975444321 11122222 233467899999999999888 8884 3888 88877764
Q ss_pred hhc---cccCCChhHHHHHHHH---hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEec-
Q 013839 303 ARA---MYGSPPVHGILLVATI---LSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS- 375 (435)
Q Consensus 303 ~~~---~~~~~~~~~q~~~~~~---l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~- 375 (435)
... ....++++.|...... ..... .+..++..+++.++..+++..|...| +.+...+.+..+-+
T Consensus 370 s~~~~yat~~sppvaqq~~ssl~~i~G~dg-----t~~g~~k~~~l~~ns~yfr~~l~~~g----fivyG~~dSpVvpll 440 (519)
T KOG1357|consen 370 SPSALYATSLSPPVAQQILTSVKHIMGEDG-----TNRGRQKIERLAENSRYFRWELQKMG----FIVYGNNDSPVVPLL 440 (519)
T ss_pred CCceeecccCChHHHHHHHHHHHhhcCCCc-----ccHHHHHHHHHHhhhHHHHHhhhcCc----EEEecCCCCCcceee
Confidence 432 2334555555554332 22111 14456777889999999999998877 34555554422211
Q ss_pred ----CCCHHHHHHHhhhccEEEeCCC-----------cEEecc-CCCCcHHHHHHHHHHHH
Q 013839 376 ----GLTPYQVDRLAKEFHIYMTQDG-----------RISMAG-VTTGNVNYLANAIHEVT 420 (435)
Q Consensus 376 ----~~~~~~~~~ll~~~gI~i~pgg-----------Ris~~~-~~~e~i~~~~~~l~~~l 420 (435)
..-..+-+.++ +++|.++-.| |++.+. .+.|+++++++.+.++=
T Consensus 441 l~~~~k~~~f~r~~l-~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 441 LYGPAKIVAFSREML-ERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred ecCcccccHHHHHHH-hcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 11334445665 4677766443 777643 36788888887776543
No 348
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=2.5e-10 Score=105.63 Aligned_cols=345 Identities=13% Similarity=0.053 Sum_probs=197.8
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCC--CCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGS--EFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
.++.+.||+..++...-.|+. .+++.+++..++... ....|-- ...-.+-+.+.+.+ +.. ..+.|. +.+
T Consensus 53 ~~g~EyiD~~ssw~~~~~Gha-npev~ral~~q~~k~~hs~~~~~t-~eav~l~~~l~~~~-~~~----~~~rvf--f~n 123 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILGHA-NPEVARALAEQAKKLGHSSNGYFT-LEAVELEEVLSAVL-GKG----SAERVF--FCN 123 (433)
T ss_pred CCcceeeeeccceeccccCCC-CHHHHHHHHHHHhhheeccCcccc-HHHHHHHHHHHhcc-cCC----CccEEE--Eec
Confidence 356899999999754444433 444445444444421 1111211 11223444444443 222 257888 999
Q ss_pred CchhHHHHHHHHHHHhCCC----C--EEEEcCCCChhhH-HHHhhCCCCeeeeeecC-CCC----CCcChHhHHHHhhcC
Q 013839 125 SGTGACRLFAEFQRRFHPE----S--HIYFPDPTWSNHH-NIWRDAQIPERTYHYYD-PDS----KSLDFAALMDDIKNA 192 (435)
Q Consensus 125 gg~~a~~~~~~~~~~~~~g----d--~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~~-~~~----~~~d~e~l~~~i~~~ 192 (435)
+||+|++.++.+.....-- + .++....+|.+.. ..+...+......|..+ ..+ ---|...+++.++.+
T Consensus 124 sGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h 203 (433)
T KOG1401|consen 124 SGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESH 203 (433)
T ss_pred CCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhC
Confidence 9999999997555433211 2 3888888886553 22322222111111100 000 122689999999977
Q ss_pred CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccc
Q 013839 193 PDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKS 271 (435)
Q Consensus 193 ~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 271 (435)
.....++++..-+-..|... +++.+..|.+.|+++|+++|.||+..+|...+ ..+....+.-.+| +.++.|.
T Consensus 204 ~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g---~~~a~e~~~~~PD----I~t~aK~ 276 (433)
T KOG1401|consen 204 KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG---YGWAQEYFGVTPD----ITTVAKP 276 (433)
T ss_pred CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc---hHHHHHHhCcCCc----ceeehhh
Confidence 66678898888787888876 78889999999999999999999988877654 2344433322222 4568999
Q ss_pred ccccCCcccEEEEEecChhHHHHHHHHHHHHhh---ccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRSQIQQIAR---AMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTT 348 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 348 (435)
++ .|+.+|..++ +++ +.+.+..-.. ..+++.++++..++...+..-. + .+.++++.+.-+..++.
T Consensus 277 L~-gGlPigA~~v---~~k----V~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~--~--~e~~k~vs~~~k~L~~~ 344 (433)
T KOG1401|consen 277 LG-GGLPIGATGV---RDK----VAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELK--D--PETLKNVSKIGKELRKL 344 (433)
T ss_pred cc-CCceeEEEee---hHH----HHhhcCCCCccccCcccCCChhhhhHHHHHHHHHc--C--HHHHHHHHHHHHHHHHH
Confidence 98 8999999875 777 7666654332 4456666777766666554210 0 13445555555555555
Q ss_pred HHHHHHhhCCCCCccccccCcceeEec----CC----CH-----HHHH---HHhhhccEEEeCCCcEEeccCCCCcHHHH
Q 013839 349 LRQNLEKLGSSLNWEHITNQLGMFCFS----GL----TP-----YQVD---RLAKEFHIYMTQDGRISMAGVTTGNVNYL 412 (435)
Q Consensus 349 l~~~l~~~~~~~~~~~~~~~~g~~~~~----~~----~~-----~~~~---~ll~~~gI~i~pggRis~~~~~~e~i~~~ 412 (435)
+.+.+..-+. ...-. ...|+++.. .+ +. .++. ..+.+.|+.+.|-+-++... ++|.++++
T Consensus 345 l~e~~~~~~~--~i~g~-~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~-~~E~i~~~ 420 (433)
T KOG1401|consen 345 LDEYLKKTPN--SICGG-VGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEH-TPEVIQRL 420 (433)
T ss_pred HHHHhccCCC--ceeee-eeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEeccccccccC-cHHHHHHH
Confidence 6666544331 11111 223333322 11 11 1111 11223577777744344433 57788888
Q ss_pred HHHHHHHHHhh
Q 013839 413 ANAIHEVTRSE 423 (435)
Q Consensus 413 ~~~l~~~l~~~ 423 (435)
++.+.+.+..+
T Consensus 421 l~i~~~~l~~~ 431 (433)
T KOG1401|consen 421 LTILEKVLSAL 431 (433)
T ss_pred HHHHHHHHHHh
Confidence 88888777654
No 349
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.37 E-value=1.7e-10 Score=112.86 Aligned_cols=170 Identities=14% Similarity=0.055 Sum_probs=120.1
Q ss_pred CcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeee
Q 013839 91 ASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTY 170 (435)
Q Consensus 91 ~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v 170 (435)
..|...=-|+.|+.+++.+-+ .. +++|++.|+..+ .++++.+||.|+++.+++......+.+.|+.++++
T Consensus 68 p~G~i~eAqe~aA~~fgAd~t------yF--vvNGTS~ank~v--i~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl 137 (557)
T COG1982 68 PEGPIKEAQELAARVFGADHT------YF--VVNGTSTANKAV--INAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYL 137 (557)
T ss_pred CCccHHHHHHHHHHHhCCCce------EE--EECCccHHHHHH--HHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEe
Confidence 355544445566666676533 34 689999999888 88999999999999999998888889999999987
Q ss_pred eecCCC--C--CCcChHhHHHHhhcCCCCcEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCC
Q 013839 171 HYYDPD--S--KSLDFAALMDDIKNAPDSSFFLLHPSAHNPT--GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGD 244 (435)
Q Consensus 171 ~~~~~~--~--~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~ 244 (435)
...-.. + ++++.+.+++++.+++...+++++ .||| |++++. ++|.+.+...++|+.+|++. +..++.
T Consensus 138 ~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vi---tnpTYdGv~~n~---~~i~~~~~~~~a~v~~deah-~~~~~~ 210 (557)
T COG1982 138 EPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVI---TNPTYDGVCYNL---RKIVELLHHYGAWVLYDEAH-PAHFDF 210 (557)
T ss_pred cCCCCccccccCCCCHHHHHHHHHhChhhheeEEE---ecCccceEeecH---HHHHHHHhhcCceEEhhhcC-cccccc
Confidence 542222 1 688999999998877544266666 5777 666654 58889999999999999994 444331
Q ss_pred CcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEE
Q 013839 245 LDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLS 283 (435)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~ 283 (435)
. +..+- .......+++..|..|.++ ++.-+.++
T Consensus 211 ~--~~l~~--~~~~~~~~~~tqS~HK~l~--alSQaS~i 243 (557)
T COG1982 211 S--PMLPE--SALNGGADFVTQSTHKLLA--ALSQASMI 243 (557)
T ss_pred c--ccCcc--hhhhcCceEEEechhhhhh--hhhhhHHH
Confidence 1 11111 1223467899999999974 44444443
No 350
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.36 E-value=5.5e-10 Score=110.26 Aligned_cols=276 Identities=12% Similarity=0.069 Sum_probs=149.6
Q ss_pred CCeeeEecCCchhHHHHHHHHHHHhC------C------CCEEEEcCCCChhhHHHHh-hCCCC-------e------ee
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRRFH------P------ESHIYFPDPTWSNHHNIWR-DAQIP-------E------RT 169 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~~~------~------gd~Vlv~~p~y~~~~~~~~-~~g~~-------~------~~ 169 (435)
+.+. ++++|++|++.+.++..... . +.+|+...-+|.+...... ..|.. . +.
T Consensus 104 ~~v~--f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~ 181 (431)
T TIGR03251 104 PHLF--FIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRID 181 (431)
T ss_pred CEEE--EeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCC
Confidence 4666 89999999999976655431 1 3679999988877654322 11211 0 00
Q ss_pred eeec----CCCCC-------CcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeeeeccC
Q 013839 170 YHYY----DPDSK-------SLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVD-PTEEQWREISYQFKVKGHFPFFDMAY 237 (435)
Q Consensus 170 v~~~----~~~~~-------~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~vi~Deay 237 (435)
.|.. +.++. .-+++++++.+.+.+.++.++++...+.-.|.. .+++.+++|.++|++||+++|.||++
T Consensus 182 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 182 NPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred CCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 1100 00000 013455666676555678888887777777876 47888999999999999999999999
Q ss_pred CCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHH-HHHH-hhccccCCChhHH
Q 013839 238 QGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQ-IQQI-ARAMYGSPPVHGI 315 (435)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~-l~~~-~~~~~~~~~~~~q 315 (435)
.++...+ ..+....+ +....++ +++|.+ +. .|++. .++ ...+... +... ....+.+.+.++.
T Consensus 262 tG~GrtG---~~~a~~~~-gv~PDi~---~~gK~~--~~--~g~~~----~~~-i~~~~~~~~~~~~~~~~T~~gnpl~~ 325 (431)
T TIGR03251 262 TGVGLTG---TAWAYQQL-GVQPDIV---AFGKKT--QV--CGIMA----GRR-VDEVADNVFAVPSRLNSTWGGNLVDM 325 (431)
T ss_pred hccCccc---hHHHHHhc-CCCCCEE---EecccC--cc--ceEEe----cch-HHHhhhhcccCccccCCCCCCCHHHH
Confidence 8887653 12232222 2222233 368875 22 25553 332 1112211 1100 1123455666666
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCCCccccccCcceeEecCC-C---HHHHHHHhhhc
Q 013839 316 LLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG--SSLNWEHITNQLGMFCFSGL-T---PYQVDRLAKEF 389 (435)
Q Consensus 316 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~-~---~~~~~~ll~~~ 389 (435)
.++.+.|+.-. + ....++.+++-+.+.+.|+++. .+..+...... |.+..+.+ + ...+.+.+.++
T Consensus 326 aaa~a~L~~l~------~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~~ 396 (431)
T TIGR03251 326 VRATRILEIIE------E--ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGR-GLMCAFDLPSTADRDEVIRQLYRE 396 (431)
T ss_pred HHHHHHHHHHH------h--cCHHHHHHHHHHHHHHHHHHHHHhCccceeccccc-ceeEEEEeCCHHHHHHHHHHHHhC
Confidence 66666654210 1 1122333444444444443321 11001122233 33443333 1 22343334568
Q ss_pred cEEEeCCC----cEEec-cCCCCcHHHHHHHHHH
Q 013839 390 HIYMTQDG----RISMA-GVTTGNVNYLANAIHE 418 (435)
Q Consensus 390 gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~ 418 (435)
||.+.+.| ||+.. ..+++++++++++|.+
T Consensus 397 Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 397 GVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred CeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 99998865 77643 2388999999999875
No 351
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.36 E-value=2.3e-10 Score=109.75 Aligned_cols=258 Identities=14% Similarity=0.096 Sum_probs=159.9
Q ss_pred ecCCchhHHHHHHHHHHHh-CCCCEEEEcCCCChhh-H-HHHhhCCC-CeeeeeecCCCCCCcChHhHHHHhhcCCCCcE
Q 013839 122 QALSGTGACRLFAEFQRRF-HPESHIYFPDPTWSNH-H-NIWRDAQI-PERTYHYYDPDSKSLDFAALMDDIKNAPDSSF 197 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~-~~gd~Vlv~~p~y~~~-~-~~~~~~g~-~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 197 (435)
++.+||++++.+ +..++ .+||+|++.. .|+.- . ++++.+|+ ++..+.. +.+..+|+++++. . +
T Consensus 63 l~GsGT~a~Eaa--~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~--~---~--- 129 (374)
T TIGR01365 63 VPASDTGAVEMA--LWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF--K---N--- 129 (374)
T ss_pred ECCchHHHHHHH--HHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC--C---C---
Confidence 688999999999 88888 4899999865 55443 4 77888998 4666654 5566788888862 1 1
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCC
Q 013839 198 FLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGH 277 (435)
Q Consensus 198 ~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~ 277 (435)
.+++++....||+..+.+ +++..+ ++.++|+|.+ +.+.-.+.+ + + .-++++.|..|++++|+
T Consensus 130 ~v~~vhnETSTGv~npv~---~i~~~~--~~~lliVDav-Ss~g~~~l~-----~----d--~iDv~~tgsQK~L~~pp- 191 (374)
T TIGR01365 130 DVVFTWNGTTSGVRVPNG---DFIPAD--REGLTICDAT-SAAFAQDLD-----Y----H--KLDVVTFSWQKVLGGEG- 191 (374)
T ss_pred CEEEecCCCchheecccc---cccccc--CCCcEEEEcc-chhcCCCCC-----h----h--HCcEEEEechhccCCCC-
Confidence 245667777888888753 444222 5899999999 444433221 1 1 24677888999998765
Q ss_pred cccEEEEEecChhHHHHHHH--------HHHH----------Hh-hccccCCChhHHHHHHHHhCChhhHHHHHH-HHHH
Q 013839 278 RVGCLSILCVDSKQAAAIRS--------QIQQ----------IA-RAMYGSPPVHGILLVATILSDPNLKSLWID-EVKI 337 (435)
Q Consensus 278 RvG~~~~~~~~~~~~~~~~~--------~l~~----------~~-~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~-~~~~ 337 (435)
.++++++ +++.+++... .+.+ .. ......++....+++..+|..- .++ .++.
T Consensus 192 Gls~v~v---s~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i-----~~egGle~ 263 (374)
T TIGR01365 192 AHGMLIL---SPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWA-----ESIGGLKP 263 (374)
T ss_pred ceEEEEE---CHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHH-----HHccCHHH
Confidence 2445543 7775544221 1000 00 1223344444444444444311 112 4888
Q ss_pred HHHHHHHHHHHHHHHHHhhC-CCCCccc---cccCcce-eEec-C-C-----C-----HHHHHHHhhhccEEEeCCC---
Q 013839 338 MADRIQRKRTTLRQNLEKLG-SSLNWEH---ITNQLGM-FCFS-G-L-----T-----PYQVDRLAKEFHIYMTQDG--- 397 (435)
Q Consensus 338 ~~~~~~~~~~~l~~~l~~~~-~~~~~~~---~~~~~g~-~~~~-~-~-----~-----~~~~~~ll~~~gI~i~pgg--- 397 (435)
..+|++++++.+++.++++| .. .+.. ....... +... + + + .+.+.+.++++||.+.+|.
T Consensus 264 ~~~Rh~~~a~~l~~~l~~lg~l~-~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~ 342 (374)
T TIGR01365 264 LIARADDNLAVLEAFVAKNNWIH-FLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRD 342 (374)
T ss_pred HHHHHHHHHHHHHHHHHHCCCcc-cCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEecccccc
Confidence 99999999999999999998 32 1111 1111111 1121 2 3 2 3556666678899999873
Q ss_pred -----cEE-eccCCCCcHHHHHHHHHHH
Q 013839 398 -----RIS-MAGVTTGNVNYLANAIHEV 419 (435)
Q Consensus 398 -----Ris-~~~~~~e~i~~~~~~l~~~ 419 (435)
||+ ++..+.++++.+++.|.=+
T Consensus 343 ~~~~fRIg~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 343 APSGLRIWCGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred CCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence 997 4556889999888887643
No 352
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.35 E-value=5.1e-10 Score=110.36 Aligned_cols=277 Identities=11% Similarity=0.035 Sum_probs=155.0
Q ss_pred CCeeeEecCCchhHHHHHHHHHHHhC------------------------CC---CEEEEcCCCChhhHHHHh-hCCCC-
Q 013839 116 GRSAGVQALSGTGACRLFAEFQRRFH------------------------PE---SHIYFPDPTWSNHHNIWR-DAQIP- 166 (435)
Q Consensus 116 ~~v~~~~t~gg~~a~~~~~~~~~~~~------------------------~g---d~Vlv~~p~y~~~~~~~~-~~g~~- 166 (435)
+++. ++++|++|++.+..+..... +| .+|+....+|.+...... ..|-.
T Consensus 123 ~~v~--f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~ 200 (464)
T TIGR00699 123 DQVW--TGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKP 200 (464)
T ss_pred CEEE--EeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcc
Confidence 4677 89999999999976554321 11 269999999977644322 11110
Q ss_pred ----------eeeeeecCCC-C-----------CCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHH
Q 013839 167 ----------ERTYHYYDPD-S-----------KSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDP-TEEQWREISYQ 223 (435)
Q Consensus 167 ----------~~~v~~~~~~-~-----------~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~ 223 (435)
...+|..... . ..-+++.+++.+.+......+|++.......|... +++.+++|.++
T Consensus 201 ~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~l 280 (464)
T TIGR00699 201 IHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI 280 (464)
T ss_pred ccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence 1111210000 0 00145667777865545678888877777778877 68889999999
Q ss_pred HHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcC-CeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHH
Q 013839 224 FKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDE-HLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI 302 (435)
Q Consensus 224 ~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~ 302 (435)
|++||+++|.||+..+|...+ ..+....+ +.. ..+| .+++|.+|..| +++ + . + ........
T Consensus 281 c~~~g~lLI~DEV~tGfGrtG---~~fa~e~~-gv~~~PDi--~t~gK~lg~gG----~~~--~-~-~----~~~~~~~~ 342 (464)
T TIGR00699 281 TKKHNVAFIVDEVQTGVGATG---KFWAHEHW-NLDDPPDM--VTFSKKFQTAG----YFF--H-D-P----AFRPNKPY 342 (464)
T ss_pred HHHcCCEEEEeeeeeCCCCCc---chhHHHhc-CCCCCCCE--EEehhhhccCC----ccc--c-c-h----hccCCCCc
Confidence 999999999999988776543 12233222 221 1222 45799986233 442 2 2 2 21111111
Q ss_pred hhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCCCccccc-cCcceeEecCC-C
Q 013839 303 ARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG--SSLNWEHIT-NQLGMFCFSGL-T 378 (435)
Q Consensus 303 ~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~-~~~g~~~~~~~-~ 378 (435)
....+.+.++++..++.+.|+.-. .+...++.++.-++|.+.|+++. .+..+.... ...|++.-+.+ +
T Consensus 343 ~~~~T~~gnp~~~aaa~a~L~~l~--------~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~ 414 (464)
T TIGR00699 343 RQFNTWMGDPSRALILREIIQEIK--------RKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD 414 (464)
T ss_pred ccccCCCCCHHHHHHHHHHHHHHH--------hcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC
Confidence 123455566666666655553211 12333445555555556665542 110111222 12343433333 2
Q ss_pred ---HHHHHHHhhhccEEEeCCC----cEEec-cCCCCcHHHHHHHHHHHH
Q 013839 379 ---PYQVDRLAKEFHIYMTQDG----RISMA-GVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 379 ---~~~~~~ll~~~gI~i~pgg----Ris~~-~~~~e~i~~~~~~l~~~l 420 (435)
...+.+.+.++||.+.+.| ||... ..+++++++++++|.+++
T Consensus 415 ~~~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 415 EAKRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 2234333346899998876 66643 348999999999998753
No 353
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.35 E-value=4.4e-10 Score=107.73 Aligned_cols=345 Identities=11% Similarity=-0.007 Sum_probs=187.8
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcC---CCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG---SEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQAL 124 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~ 124 (435)
+++..+|-..|....--|. ..++..+++.+++.. -......... ..+|-+.+++..-..+ -++|. ++.
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh-~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~~~-----l~~vF--f~~ 112 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGH-GRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPEGG-----LDHVF--FTD 112 (449)
T ss_pred CCCEEEecccHHHHhhcCc-CCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCCCC-----ccEEE--EeC
Confidence 5577788777754222221 122333344444432 1011111111 3455555555553111 35788 999
Q ss_pred CchhHHHHHHHHHHH-h-CCC----CEEEEcCCCChhhHHHHhhC-C-------------CCeeeeeecC-----C-CCC
Q 013839 125 SGTGACRLFAEFQRR-F-HPE----SHIYFPDPTWSNHHNIWRDA-Q-------------IPERTYHYYD-----P-DSK 178 (435)
Q Consensus 125 gg~~a~~~~~~~~~~-~-~~g----d~Vlv~~p~y~~~~~~~~~~-g-------------~~~~~v~~~~-----~-~~~ 178 (435)
||++|++.++++..- + ..| .+++.-..+|.+-.-..-.. | ..+..++... . ..+
T Consensus 113 sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~ 192 (449)
T COG0161 113 SGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEG 192 (449)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCC
Confidence 999999999743322 2 233 34777778886432111111 1 1122222210 0 001
Q ss_pred C----cChHhHHHHhhcCC-CCcEEEEeCCCCCC-CCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHH
Q 013839 179 S----LDFAALMDDIKNAP-DSSFFLLHPSAHNP-TGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQA 251 (435)
Q Consensus 179 ~----~d~e~l~~~i~~~~-~~~~~v~~~~p~NP-tG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~ 251 (435)
. -..++|++.+.++. .+..++++.....- +|+.+ ++..|+++.++|++||+++|.||+-.+|+-.+ ....
T Consensus 193 ~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG---~~FA 269 (449)
T COG0161 193 DEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTG---KMFA 269 (449)
T ss_pred hHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCc---hhhh
Confidence 1 23577888887765 56677777655555 78876 56679999999999999999999999988765 1222
Q ss_pred HHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHH-----hhccccCCChhHHHHHHHHhCChh
Q 013839 252 IRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI-----ARAMYGSPPVHGILLVATILSDPN 326 (435)
Q Consensus 252 ~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~q~~~~~~l~~~~ 326 (435)
...+ +....++ +++|.++-.=+.+|.++ + +++ +.+.+..- ....+.+.++++..++.+-| +
T Consensus 270 ~e~~-gi~PDi~---~~aKGLT~GY~Pl~a~l--~-~~~----I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L---~ 335 (449)
T COG0161 270 CEHA-GIVPDIL---CLAKGLTGGYLPLSAVL--T-SDR----IYEAFSDGDAGAFMHGHTYSGNPLACAAALANL---D 335 (449)
T ss_pred hhhc-CCCCCee---eecccccccchhhHhHh--h-hHH----HHHHHhcccCCeeccCCccccCHHHHHHHHHHH---H
Confidence 2222 2222333 36888763334455553 2 556 66665543 12234455566444444333 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCccccccCcceeEecCC----C---------HHHHHHHhhhccEE
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEK-LGSSLNWEHITNQLGMFCFSGL----T---------PYQVDRLAKEFHIY 392 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~g~~~~~~~----~---------~~~~~~ll~~~gI~ 392 (435)
+.+. +...++.++...++.+.|++ +.....+-.. ..-|+..-+.+ . ...+.....++|+.
T Consensus 336 i~e~-----e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdV-R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~ 409 (449)
T COG0161 336 ILEE-----EDLLERVAEIGAYLQAGLQAALADHPLVGDV-RGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLL 409 (449)
T ss_pred HHHh-----cCHHHHHHHHHHHHHHHHHHhcccCCcEEEe-eccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeE
Confidence 2111 34455566666777777765 2210011112 23344443322 1 23555556679999
Q ss_pred EeCCC-cEEec---cCCCCcHHHHHHHHHHHHHhhh
Q 013839 393 MTQDG-RISMA---GVTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 393 i~pgg-Ris~~---~~~~e~i~~~~~~l~~~l~~~~ 424 (435)
++|.| -+-++ ..++++++++++++++.+++..
T Consensus 410 iRp~g~~i~~~PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 410 IRPLGDVIYLMPPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred EeecCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 99998 33332 2489999999999999998654
No 354
>PLN02452 phosphoserine transaminase
Probab=99.32 E-value=4.2e-10 Score=107.94 Aligned_cols=261 Identities=15% Similarity=0.140 Sum_probs=155.7
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhh--HHHHhhCCCCeeeeeecC-CCCCCcChHhHHHHhhcCCCCcEE
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNH--HNIWRDAQIPERTYHYYD-PDSKSLDFAALMDDIKNAPDSSFF 198 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~-~~~~~~d~e~l~~~i~~~~~~~~~ 198 (435)
+..||+.+++.+ ++.++.+||++++..-+..+- ...++.+|...+.....+ .....++++++ +.. +..+.
T Consensus 76 l~Gsgt~~~ea~--~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~ 148 (365)
T PLN02452 76 LQGGASTQFAAI--PLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELT-PDAKF 148 (365)
T ss_pred EeCccHHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCC-CCCcE
Confidence 567789998888 888888999988777555333 345667776433332111 11124566654 222 45778
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCc
Q 013839 199 LLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHR 278 (435)
Q Consensus 199 v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~R 278 (435)
+.+++.+..||+.++ +++++. ++++|+|.+ +.+.-.+. ++..+ + + ...|..|++|.+|
T Consensus 149 v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~-Ss~g~~pi-----dv~~~----~-v-~~~saqK~lGP~G-- 206 (365)
T PLN02452 149 VHICANETIHGVEFK--DYPDVG------NVPLVADMS-SNFLSKPV-----DVSKY----G-V-IYAGAQKNVGPSG-- 206 (365)
T ss_pred EEECCCCCCCcEecC--cccccC------CCeEEEECC-ccccCccc-----CHHHc----C-E-EEEecccccCCCC--
Confidence 888888888898643 233432 379999999 44443222 12111 1 2 3369999999888
Q ss_pred ccEEEEEecChhHHHHHHHH---HHHH-----hhccccCCChhHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHH
Q 013839 279 VGCLSILCVDSKQAAAIRSQ---IQQI-----ARAMYGSPPVHGILLVATILSDPNLKSLWID-EVKIMADRIQRKRTTL 349 (435)
Q Consensus 279 vG~~~~~~~~~~~~~~~~~~---l~~~-----~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l 349 (435)
+|.+++ +++.+++.... +..+ ....+.+++....+++..+|+.-. ++ .++.+.++++++.+++
T Consensus 207 l~~v~v---r~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~-----~~gGl~~~~~r~~~~a~~l 278 (365)
T PLN02452 207 VTIVII---RKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLL-----AQGGLKAMEKRNIRKADLL 278 (365)
T ss_pred eEEEEE---cHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHH-----HccCHHHHHHHHHHHHHHH
Confidence 566654 77743331110 0000 112335677777777777765321 12 4788999999999999
Q ss_pred HHHHHhh-CCCCCcccccc--CcceeE-ec--CC-CHHHHHHHhhhccEEEeCCC------cEEecc-CCCCcHHHHHHH
Q 013839 350 RQNLEKL-GSSLNWEHITN--QLGMFC-FS--GL-TPYQVDRLAKEFHIYMTQDG------RISMAG-VTTGNVNYLANA 415 (435)
Q Consensus 350 ~~~l~~~-~~~~~~~~~~~--~~g~~~-~~--~~-~~~~~~~ll~~~gI~i~pgg------Ris~~~-~~~e~i~~~~~~ 415 (435)
++.|++. |+.. ....+ ...+.+ |. +. ..+.+.+.++++|+...+|. |+|..+ ++.++++.+++.
T Consensus 279 ~~~l~~~~G~y~--~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~ 356 (365)
T PLN02452 279 YDAIDESNGFYV--CPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAF 356 (365)
T ss_pred HHHHHhCCCccc--CCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHH
Confidence 9999875 3311 11111 122222 21 22 22334444578999999982 998644 578888888888
Q ss_pred HHHHHH
Q 013839 416 IHEVTR 421 (435)
Q Consensus 416 l~~~l~ 421 (435)
++++-+
T Consensus 357 m~~f~~ 362 (365)
T PLN02452 357 MKDFQA 362 (365)
T ss_pred HHHHHH
Confidence 877654
No 355
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.30 E-value=5.1e-10 Score=116.90 Aligned_cols=300 Identities=11% Similarity=0.061 Sum_probs=175.4
Q ss_pred CCCCCCC---cccHHHHHHHHHhH---cCCCCccccCCCeeeEecCCchhHHHHHHHHHHHh------CCCCEEEEcCCC
Q 013839 85 FLESISA---SVSTKMVEESVKLV---YGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRF------HPESHIYFPDPT 152 (435)
Q Consensus 85 ~~~Y~~~---~g~~~lr~~ia~~l---~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~------~~gd~Vlv~~p~ 152 (435)
.+.|.|. +|.-++...+.+++ .|.+ ++ .+...+|+.+-...+...... ...++|+++.-.
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd-------~~-Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~sa 587 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD-------AI-SLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSA 587 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC-------Cc-ccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccc
Confidence 4456654 56666666666665 3443 21 235666776655332111111 122578899988
Q ss_pred ChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceee
Q 013839 153 WSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPF 232 (435)
Q Consensus 153 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi 232 (435)
++.....+...|++++.++. .+++.+|+++|+++++++..++++|++.+|+| +|..-+ ++++|+++|+++|.+++
T Consensus 588 HgtnPasa~~~G~~Vv~V~~--d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~ 662 (939)
T TIGR00461 588 HGTNPASAAMAGMQVVPVNC--DQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVY 662 (939)
T ss_pred cCcCHHHHHHCCCEEEEecc--CCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEE
Confidence 76666668889999999987 35678999999999985445789999999999 787642 37899999999999999
Q ss_pred eeccCCC-ccCCCCcccHHHHHHhhhcCCeEEEEeccccccc----ccCCcccEEEEEecChhHHHHHHHHHHHH-----
Q 013839 233 FDMAYQG-FASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMG----LYGHRVGCLSILCVDSKQAAAIRSQIQQI----- 302 (435)
Q Consensus 233 ~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g----~~G~RvG~~~~~~~~~~~~~~~~~~l~~~----- 302 (435)
+|.++.. +.. .. -+...+-+++.+|..|.|+ ..|-.+|.+.+ .++ +...+-..
T Consensus 663 VDgAq~~al~~--l~--------~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~v---r~~----L~~~lPg~~v~~t 725 (939)
T TIGR00461 663 LDGANMNAQVG--LT--------SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KSH----LIPFLPKHDVVSM 725 (939)
T ss_pred EEecChhhCCC--CC--------CccccCCCEEEecCCccCCCCCCCCCCCeEEEEE---hhh----chhhcCCCccccc
Confidence 9999632 221 10 1122356788899999764 33455788853 433 32222100
Q ss_pred -------hh-ccccC--CCh-hHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcce
Q 013839 303 -------AR-AMYGS--PPV-HGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGM 371 (435)
Q Consensus 303 -------~~-~~~~~--~~~-~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~ 371 (435)
+. ...++ ... .....+...+..-+ .+.+++..+....+.+++.+.|++. .+ + ..+...+.
T Consensus 726 ~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG-----~~GL~~~a~~ailnAnYl~~rL~~~-~~--~-l~~~~~~~ 796 (939)
T TIGR00461 726 ITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMG-----NEGLPKASVVAILNANYMATRLKDH-YP--I-LFVGTLKH 796 (939)
T ss_pred ccCCCCccccccccccccCcHHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHhhcc-Cc--c-cccCCCCc
Confidence 00 00111 111 00011111222111 1456677777777888999998763 21 1 12222222
Q ss_pred ----eEe--c------CCCHHHH-HHHhhhccEEEeCC-----C----cEEeccCCCCcHHHHHHHHHHHHHhhhh
Q 013839 372 ----FCF--S------GLTPYQV-DRLAKEFHIYMTQD-----G----RISMAGVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 372 ----~~~--~------~~~~~~~-~~ll~~~gI~i~pg-----g----Ris~~~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
|++ . |.+.+.+ ++| .++|+....- | +.+-.. +.++|+++++++.++-++..+
T Consensus 797 ~~hEfv~~~~~~~~~~g~~~~dIakrL-~d~G~hapt~~~pv~g~lmiepTE~e-skeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 797 VAHECILDLRPLKAKTGIEAIDVAKRL-QDYGFHAPTLSFPVPGTLMVEPTESE-SLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred eeEEEEEeccchhhhcCCCHHHHHHHH-HhCCeeccccCCccCCeEEEEeeccC-CHHHHHHHHHHHHHHHHHHHH
Confidence 221 1 2444555 555 4689865211 3 333333 778899999999887765543
No 356
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.30 E-value=6.7e-10 Score=115.37 Aligned_cols=299 Identities=13% Similarity=0.058 Sum_probs=173.6
Q ss_pred CCCCC---CcccHHHHHHHHHhH---cCCCCccccCCCeeeEecCCchhHHHHHHHHHHH--hCCC----CEEEEcCCCC
Q 013839 86 LESIS---ASVSTKMVEESVKLV---YGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR--FHPE----SHIYFPDPTW 153 (435)
Q Consensus 86 ~~Y~~---~~g~~~lr~~ia~~l---~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~--~~~g----d~Vlv~~p~y 153 (435)
+.|.| .+|.-++...+.+++ .|.+ .+.+.-.+|+.+....+..... ..+| ++|+++.-.+
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd--------~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saH 601 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFD--------AICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAH 601 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCC--------eEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEeccccc
Confidence 55888 788877777777665 3443 2222445666666444212221 2233 5778888766
Q ss_pred hhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 154 SNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 154 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
......+...|++++.++. + +++.+|+++|++++++..+++.++.+.+|++=++. .+++++|+++|+++|+++++
T Consensus 602 gtNpasa~~~GieVv~Vp~-D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv~v 676 (954)
T PRK12566 602 GTNPASAQMAGMRVVIVEC-D-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQVYM 676 (954)
T ss_pred ccCHHHHHHCCCEEEEecc-C-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEEEE
Confidence 4445557788999999998 3 45689999999999755567788888777654433 46688999999999999999
Q ss_pred eccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc----CCcccEEEEEecChhHHHHHHHHHHHHh------
Q 013839 234 DMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY----GHRVGCLSILCVDSKQAAAIRSQIQQIA------ 303 (435)
Q Consensus 234 Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~----G~RvG~~~~~~~~~~~~~~~~~~l~~~~------ 303 (435)
|.+. ........ . +...+-+++.+++.|+|+.| |.-+|.+.+ .+. +...+.+.-
T Consensus 677 DgA~-~~a~~~l~----~----Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav---~~~----L~pfLp~~P~~d~~G 740 (954)
T PRK12566 677 DGAN-LNAQVGLA----R----PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGV---RAH----LAPFVANHPVVPVEG 740 (954)
T ss_pred EeeC-hhhccCCC----C----hhhcCCCEEEecCCcccCcCccCCCCccchhhh---hhh----hhhhccCCCCcCCCC
Confidence 9994 22222110 0 12235578899999988533 333455421 222 322222210
Q ss_pred ---h-ccccCCChhH---HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeE---
Q 013839 304 ---R-AMYGSPPVHG---ILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFC--- 373 (435)
Q Consensus 304 ---~-~~~~~~~~~~---q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~--- 373 (435)
+ ...++.+..+ ..++..++..-+ + + +++..+....+.+++.+.|.+. .+ ..+ .+..+.|.
T Consensus 741 ~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG----~-e-Lk~aa~~ailnAnYla~rL~~~-~~--v~~-~~~~~~~~hEf 810 (954)
T PRK12566 741 PDPNNGAVSAAPWGSASILPISWMYIAMMG----P-Q-LADASEVAILSANYLANQLGGA-FP--VLY-RGRNERVAHEC 810 (954)
T ss_pred CCCCCCceeecccchHHHHHHHHHHHHHHC----H-H-HHHHHHHHHHHHHHHHHHhHhh-CC--CCc-CCCCCCeeeEE
Confidence 0 0111111111 112222332211 1 2 5555555566888888888763 22 223 22222211
Q ss_pred ---ec------CCCHHHH-HHHhhhccEEEe----CC--C-cEEeccC-CCCcHHHHHHHHHHHHHhhh
Q 013839 374 ---FS------GLTPYQV-DRLAKEFHIYMT----QD--G-RISMAGV-TTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 374 ---~~------~~~~~~~-~~ll~~~gI~i~----pg--g-Ris~~~~-~~e~i~~~~~~l~~~l~~~~ 424 (435)
+. +.+.+.+ .+|+ ++||... |. + |++..-. +.++|++++++|+++.++..
T Consensus 811 ii~~~~l~~~~g~~~~dvakRL~-d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 811 ILDLRPLKAQTGISEEDVAKRLM-DYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred EEEccccccccCCCHHHHHHHHH-HCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 11 2343444 6665 7888653 22 2 8886432 78899999999998887643
No 357
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.29 E-value=1.3e-09 Score=115.73 Aligned_cols=303 Identities=11% Similarity=0.069 Sum_probs=172.6
Q ss_pred CCCCC---CcccHHHHHHHHHhH---cCCCCccccCCCeeeEecCCchhHHHHHH-HHHH-HhCCCC----EEEEcCCCC
Q 013839 86 LESIS---ASVSTKMVEESVKLV---YGKDSDVVKEGRSAGVQALSGTGACRLFA-EFQR-RFHPES----HIYFPDPTW 153 (435)
Q Consensus 86 ~~Y~~---~~g~~~lr~~ia~~l---~~~~~~~~~~~~v~~~~t~gg~~a~~~~~-~~~~-~~~~gd----~Vlv~~p~y 153 (435)
+.|.| .+|.-++...+.+++ .|.+ ++. +..++|+++....+ .+.. ...+|| +|++++..+
T Consensus 529 hP~qp~e~~qG~l~~i~e~q~~l~eltG~d-------~~s-l~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH 600 (954)
T PRK05367 529 HPFAPAEQAAGYRELIDQLEAWLAEITGYD-------AVS-LQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAH 600 (954)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHCCC-------CEE-ECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhh
Confidence 44555 355666666666665 3432 333 24556666654432 1221 135665 599999888
Q ss_pred hhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 154 SNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 154 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
......+...|++++.+++ + .++.+|+++|++++..+..++.++++.+|++-.+. .+++++|+++|+++|+++++
T Consensus 601 ~snp~sa~~~G~~vv~v~~-d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~---e~~I~eI~~i~h~~G~~v~V 675 (954)
T PRK05367 601 GTNPASAVMAGMKVVVVAC-D-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVF---EETIREICEIVHEHGGQVYL 675 (954)
T ss_pred hhhHHHHHHCCCEEEEECC-C-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeee---cCCHHHHHHHHHHcCCEEEE
Confidence 7777778899999999987 2 34689999999999754345777777666554222 24577999999999999999
Q ss_pred eccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccc----cCCcccEEEEEecChhHHHHHHHHHHHHh-----h
Q 013839 234 DMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGL----YGHRVGCLSILCVDSKQAAAIRSQIQQIA-----R 304 (435)
Q Consensus 234 Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~----~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-----~ 304 (435)
|.++..-... .. . +...+-+++..+..|.|+. .|-.+|.+.+ .+. +...+.... .
T Consensus 676 DgA~~~al~~-l~-~-------pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~v---r~~----l~p~lpg~~v~~~~~ 739 (954)
T PRK05367 676 DGANMNAQVG-LA-R-------PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGV---KAH----LAPFLPGHPVQIAGG 739 (954)
T ss_pred ECcChhhccC-CC-C-------hhhcCCCEEEecCcccCCCCcCCCCCceEEEee---ccc----ccccCCCCccCcCCC
Confidence 9996322111 10 0 1112346788889999753 3444677753 333 332222111 0
Q ss_pred ---ccccCCChhHHHH----HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc-----Cccee
Q 013839 305 ---AMYGSPPVHGILL----VATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN-----QLGMF 372 (435)
Q Consensus 305 ---~~~~~~~~~~q~~----~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-----~~g~~ 372 (435)
......+.++|.. +..++..-+ .+.+++..++...+.+++.+.|++. ++ +.+..+ ...++
T Consensus 740 ~~~~g~v~ta~~g~al~~~~a~~yi~~~G-----~~Glr~~a~~~~~~A~Yl~~~L~~~-~~--~~~~~~~~~~~~e~i~ 811 (954)
T PRK05367 740 ETGIGAVSAAPFGSASILPISWMYIRMMG-----AEGLRQATEVAILNANYIAKRLKDH-YP--VLYTGANGRVAHECIL 811 (954)
T ss_pred CCCcCcchhHHHHHHHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHHHhh-cC--ccccCCCCCcccceEE
Confidence 0111112221211 111111111 1445555566667888888888764 21 212111 12233
Q ss_pred Eec------CCCHHHHHHHhhhccEEEeC-----CC--cEEecc-CCCCcHHHHHHHHHHHHHhhhh
Q 013839 373 CFS------GLTPYQVDRLAKEFHIYMTQ-----DG--RISMAG-VTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 373 ~~~------~~~~~~~~~ll~~~gI~i~p-----gg--Ris~~~-~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
-+. +.+.+.+.+.|.++|+.... .| |++..- .+.+++++++++|+++.++..+
T Consensus 812 ~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 812 DLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred EeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 332 23445554444678887643 13 776543 2778999999999888776553
No 358
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.29 E-value=3.8e-09 Score=100.95 Aligned_cols=330 Identities=15% Similarity=0.104 Sum_probs=193.0
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
.-.|||-+-.- ...|++.+++++.. + ...|..+.....|.+.+++.+ |.. ..+ .|..|.++
T Consensus 41 dV~IDLrSDTg-----T~apS~~m~aAM~~---G-DD~Y~gdpSv~~Lee~vael~-G~E-------~al--pthqGRga 101 (467)
T TIGR02617 41 DVFIDLLTDSG-----TGAVTQSMQAAMMR---G-DEAYSGSRSYYALAESVKNIF-GYQ-------YTI--PTHQGRGA 101 (467)
T ss_pred CeEEECccCCC-----CCCCCHHHHHHHHc---C-CcccccCchHHHHHHHHHHHh-CCc-------eEE--ECCCCchH
Confidence 45566655441 12366666665554 4 344888777889999999887 542 233 79999999
Q ss_pred HHHHHHHHHHhC-CCCEEEEcCC-------CChh-hHHHHhhCCCCeeeeeec--------CCCCCCcChHhHHHHhhcC
Q 013839 130 CRLFAEFQRRFH-PESHIYFPDP-------TWSN-HHNIWRDAQIPERTYHYY--------DPDSKSLDFAALMDDIKNA 192 (435)
Q Consensus 130 ~~~~~~~~~~~~-~gd~Vlv~~p-------~y~~-~~~~~~~~g~~~~~v~~~--------~~~~~~~d~e~l~~~i~~~ 192 (435)
..++ +..++. |||++.+..+ .+.. ........|+.++.++.. .+..+.+|++++++.+.+.
T Consensus 102 E~Il--~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~ 179 (467)
T TIGR02617 102 EQIY--IPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEV 179 (467)
T ss_pred HHHH--HHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhc
Confidence 8887 666677 7887775443 2222 234567788887765321 1234689999999999853
Q ss_pred C-CCcEEEEeCCCCC-CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCC----c------cCCCCcccHHHH-HHhhhcC
Q 013839 193 P-DSSFFLLHPSAHN-PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQG----F------ASGDLDKDAQAI-RIFLEDE 259 (435)
Q Consensus 193 ~-~~~~~v~~~~p~N-PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~----~------~~~~~~~~~~~~-~~~~~~~ 259 (435)
. .+...+.+.--+| --|..+|.+.++++.++|++||+.++.|.+-.. | .+.+ .+...+ +....
T Consensus 180 g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~--~si~eI~rE~~~-- 255 (467)
T TIGR02617 180 GPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKN--WSIEQITRETYK-- 255 (467)
T ss_pred CCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcC--CCHHHHHHHhhc--
Confidence 2 1111221111123 358899999999999999999999999987311 1 1211 112222 11112
Q ss_pred CeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh-----hccccCCChhHHHHHHHHhCChhhHHHHHHH
Q 013839 260 HLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA-----RAMYGSPPVHGILLVATILSDPNLKSLWIDE 334 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~ 334 (435)
.-+.+..|+||.++.| +|.+++ .++++ +..+..+.+... ...+.+.+.-...+++.-|.+.- . .++
T Consensus 256 ~aDsvt~slsKglgAp---vGg~La-g~d~~-~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~-~---~~y 326 (467)
T TIGR02617 256 YADMLAMSAKKDAMVP---MGGLLC-FKDDS-FFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM-N---LDW 326 (467)
T ss_pred cCCEEEEEcCCCCCCc---ccceEE-ecchh-HHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcc-c---HHH
Confidence 2345677899998766 344442 43442 212434333321 12344566666666655554321 1 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecC-------C-----C-HHHHHHHhhhccEEEeCCC----
Q 013839 335 VKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSG-------L-----T-PYQVDRLAKEFHIYMTQDG---- 397 (435)
Q Consensus 335 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~-------~-----~-~~~~~~ll~~~gI~i~pgg---- 397 (435)
+.. |.. ..++|.+.|.+.|.| +.. .||--++++ + . ..++..|..+.||-...-|
T Consensus 327 l~~---ri~-qv~yl~~~L~~~Gvp----i~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~ 397 (467)
T TIGR02617 327 LAY---RIN-QVQYLVNGLEEIGVV----CQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLL 397 (467)
T ss_pred HHH---HHH-HHHHHHHHHHhCCCc----EEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceec
Confidence 222 222 236778888888865 444 444333342 2 1 2345666677888765321
Q ss_pred -----------------cEEecc--CCCCcHHHHHHHHHHHHHh
Q 013839 398 -----------------RISMAG--VTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 398 -----------------Ris~~~--~~~e~i~~~~~~l~~~l~~ 422 (435)
|+.+.. .|.+.+++..++|..+.++
T Consensus 398 ~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 398 GRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 777643 2778899999999988764
No 359
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.27 E-value=7.4e-10 Score=108.83 Aligned_cols=241 Identities=17% Similarity=0.117 Sum_probs=153.2
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHH-HhC--C---C------CEEEEcCCCChhhHHHH
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQR-RFH--P---E------SHIYFPDPTWSNHHNIW 160 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~-~~~--~---g------d~Vlv~~p~y~~~~~~~ 160 (435)
+..++-+.+..++...-.. ++...+.+|.|||+|+.++..... .+. . + -+|+++.-.+..+...+
T Consensus 98 ~a~~~E~~~v~~l~~l~~~---~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa 174 (460)
T COG0076 98 AAAELEERVVNMLSDLLGA---PEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAA 174 (460)
T ss_pred hHHHHHHHHHHHHHHHhCC---CCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHH
Confidence 4556777777766322222 245567789999999987752222 221 1 1 16888888889999999
Q ss_pred hhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEE--EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCC
Q 013839 161 RDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFF--LLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQ 238 (435)
Q Consensus 161 ~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~--v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~ 238 (435)
+..|+....+++. ..++.+|++++++++.+. +.. |+-..+..|||.+ +++++|.++|+++++++.+|.||.
T Consensus 175 ~~lG~~~~~v~~~-~~~~~id~~~l~~~i~~~---t~~g~vV~~aGtT~~G~i---Ddi~~ia~ia~~~~i~lHVDAA~G 247 (460)
T COG0076 175 RYLGLGLRRVPTV-PTDYRIDVDALEEAIDEN---TIGGVVVGTAGTTDTGSI---DDIEELADIAEEYGIWLHVDAAFG 247 (460)
T ss_pred HHhCCCceeEEec-cCccccCHHHHHHHHHhh---ccCceEEEEecCCCCCcc---CCHHHHHHHHHHcCCcEEEEcccc
Confidence 9999999999984 337899999999999843 333 7777788899865 778899999999999999999998
Q ss_pred CccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhh-----ccccCCCh-
Q 013839 239 GFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIAR-----AMYGSPPV- 312 (435)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~- 312 (435)
++...-.+.+.. -......-.=+.-++.|.+. .-..+||+. ..+++.+.+....-..+.. ..+...+.
T Consensus 248 G~~~pf~~~~~~---~~f~l~~vdSIt~d~HK~g~-aP~~~G~il--~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~ 321 (460)
T COG0076 248 GFLLPFLEPDGR---WDFGLEGVDSITVDGHKYGL-APIGCGVVL--FRDEEALRRILIFADYYLPGGGIPNFTILGSRP 321 (460)
T ss_pred ceeecccCccch---hhcCCCCceEEEECcccccC-CCCCceEEE--EECHHHhhhhhhcccccCCCCCcCceeEeeccc
Confidence 876421111111 00122223345568999965 557789996 3466322221111111111 11111122
Q ss_pred ----hHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 313 ----HGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 313 ----~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
+.+++....+.. +..+++.++..++.+++.+.+++.|
T Consensus 322 ~~~~~~~~~~l~~lG~--------eGy~~l~~~~~~~a~~la~~l~~~~ 362 (460)
T COG0076 322 GRQALALYANLRRLGR--------EGYRKLLDRTLELARYLAEELEKLG 362 (460)
T ss_pred hHHHHHHHHHHHHhCH--------hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 222333333321 4566777777888899999999886
No 360
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.23 E-value=3.5e-09 Score=97.28 Aligned_cols=180 Identities=18% Similarity=0.162 Sum_probs=110.4
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcC-CCChhhHHHH----------
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPD-PTWSNHHNIW---------- 160 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~-p~y~~~~~~~---------- 160 (435)
.|-..|-+..|+. ++. ++-++-....+||+|+.++ +..+++|||+.+... .-|.....++
T Consensus 54 ~GRd~le~iyA~v-fga------E~ALVRpq~vSGTHAi~~~--Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL 124 (403)
T PF06838_consen 54 IGRDKLERIYADV-FGA------EDALVRPQFVSGTHAIALA--LFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSL 124 (403)
T ss_dssp HHHHHHHHHHHHH-CT-------SEEEEETTS-SHHHHHHHH--HHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSST
T ss_pred ccHHHHHHHHHHH-hCc------hhhhhcccccchHHHHHHH--HHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCCh
Confidence 3544444444444 454 2334444567999999888 899999999998554 4555555554
Q ss_pred hhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeC-CCCCCCCCCCCHHHHHHHHHHHHh--cCceeeeeccC
Q 013839 161 RDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHP-SAHNPTGVDPTEEQWREISYQFKV--KGHFPFFDMAY 237 (435)
Q Consensus 161 ~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~-~p~NPtG~~~~~~~l~~i~~~~~~--~~~~vi~Deay 237 (435)
...|.+...+++ .+++.+|++.++++++ ++++++.+- +...-+=-.++.++++++++++|+ -++++++|.+|
T Consensus 125 ~e~Gi~Y~~v~L--~~dg~~D~~~i~~~~~---~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCY 199 (403)
T PF06838_consen 125 KEFGIKYREVPL--TEDGTIDWEAIKKALK---PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCY 199 (403)
T ss_dssp GGGT-EEEE--B---TTSSB-HHHHHHHHH---TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TT
T ss_pred HHhCceeEEEee--cCCCCcCHHHHHHhhc---cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 456777888888 4557899999999999 778888773 333334445788999999999997 47999999999
Q ss_pred CCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCc--ccEEEEEecChhHHHHHHHHH
Q 013839 238 QGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHR--VGCLSILCVDSKQAAAIRSQI 299 (435)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~R--vG~~~~~~~~~~~~~~~~~~l 299 (435)
.+|.... + +. .-.-+++.+|+=|+.| .|+- -||+++ .+++++....++
T Consensus 200 GEFvE~~-E----P~-----~vGADl~aGSLIKNpG-GgiAptGGYIaG---r~~lVe~~a~RL 249 (403)
T PF06838_consen 200 GEFVETQ-E----PT-----EVGADLMAGSLIKNPG-GGIAPTGGYIAG---RKDLVERAAYRL 249 (403)
T ss_dssp TTTTSSS------GG-----GGT-SEEEEETTSGGG-TTT-SS-EEEEE---SHHHHHHHHHHH
T ss_pred ceecccc-C----cc-----ccchhheeccceeCCC-CCccCcCCEEec---hHHHHHHHHhhh
Confidence 9998652 1 11 1134788999999976 4432 378864 888444443333
No 361
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.20 E-value=4.8e-09 Score=99.67 Aligned_cols=260 Identities=17% Similarity=0.104 Sum_probs=151.3
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEE--EcCCCChh-hHHHHhhCCCCeeeeeecCC--CCCCcChHhHHHHhhcCCCCc
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIY--FPDPTWSN-HHNIWRDAQIPERTYHYYDP--DSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vl--v~~p~y~~-~~~~~~~~g~~~~~v~~~~~--~~~~~d~e~l~~~i~~~~~~~ 196 (435)
+..||+++++.+ .+.++.+||+++ +....|+. +...++.+| ++..+..... .+..++++++ .+. ++.
T Consensus 73 l~GggT~~~ea~--~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~---~d~ 144 (364)
T PRK12462 73 LQGGSSLQFSMI--PMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWD---ARA 144 (364)
T ss_pred EeccHHHHHHHH--HHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccC---CCC
Confidence 456689998888 888889999655 44444432 234555666 5443321011 1134445554 122 356
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccC
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYG 276 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G 276 (435)
+.+.+++....||+..+ ++.+.++.++|+|.+ +.+.-.+. .+ .+..++..|..|++|.||
T Consensus 145 ~~v~~t~NETstGv~~~--------~~~~~~~~llvvD~s-S~~~s~pi-----d~------~~~dvi~agsQKnlgP~G 204 (364)
T PRK12462 145 PFRHYVSNETVEGLQFP--------DAAGLPDSPLIADMS-SDFMSRPF-----DV------EAYGMVYAHAQKNLGPAG 204 (364)
T ss_pred cEEEEccCCCCceEecC--------cccccCCCeEEEEcC-chhhCCCC-----Ch------HHccEEEeeccccCCCCc
Confidence 77877777778888875 223346899999998 44432222 11 123677888999999887
Q ss_pred CcccEEEEEecChhHHHHHHHH------HHHHh--hccccCCChhHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHH
Q 013839 277 HRVGCLSILCVDSKQAAAIRSQ------IQQIA--RAMYGSPPVHGILLVATILSDPNLKSLWID--EVKIMADRIQRKR 346 (435)
Q Consensus 277 ~RvG~~~~~~~~~~~~~~~~~~------l~~~~--~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~--~~~~~~~~~~~~~ 346 (435)
+ +.+++ +++.+++.... ++... ...+.+||....+++...|+-- .++ .++.+.++.+++.
T Consensus 205 l--tvviv---s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i-----~~e~GGl~~~~~r~~~ka 274 (364)
T PRK12462 205 V--TVAII---RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWI-----RDEIGGVHAMRDINARKA 274 (364)
T ss_pred e--EEEEE---CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHH-----HHhccCHHHHHHHHHHHH
Confidence 4 44543 77754432111 11111 1344567777777776665421 124 5788889999999
Q ss_pred HHHHHHHHhhC-CCCCccccccCcceeEecCC-----CHHHHHHHhhhccEEEeCC-----C-cEEecc-CCCCcHHHHH
Q 013839 347 TTLRQNLEKLG-SSLNWEHITNQLGMFCFSGL-----TPYQVDRLAKEFHIYMTQD-----G-RISMAG-VTTGNVNYLA 413 (435)
Q Consensus 347 ~~l~~~l~~~~-~~~~~~~~~~~~g~~~~~~~-----~~~~~~~ll~~~gI~i~pg-----g-Ris~~~-~~~e~i~~~~ 413 (435)
+.+++.++... +...........-+-+...+ +.+++..+ +++|+.-..| | |+|+.+ ++.|.++.++
T Consensus 275 ~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a-~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~ 353 (364)
T PRK12462 275 AMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPRLDTLFKEQS-TEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLC 353 (364)
T ss_pred HHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHHHHHHHHHHH-HHCCCccccCCcccCceEEEcCCCCCHHHHHHHH
Confidence 99999998875 21111111111222233222 33444444 6789999877 3 999765 3666666666
Q ss_pred HHHHHHH
Q 013839 414 NAIHEVT 420 (435)
Q Consensus 414 ~~l~~~l 420 (435)
+-++++-
T Consensus 354 ~fm~~f~ 360 (364)
T PRK12462 354 AFLKDFA 360 (364)
T ss_pred HHHHHHH
Confidence 6665553
No 362
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.16 E-value=4.3e-08 Score=102.59 Aligned_cols=215 Identities=13% Similarity=0.069 Sum_probs=124.5
Q ss_pred HhHHHHhhc-----CCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh
Q 013839 183 AALMDDIKN-----APDSSFFLLHPS-AHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF 255 (435)
Q Consensus 183 e~l~~~i~~-----~~~~~~~v~~~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~ 255 (435)
+.+++.+.+ .+++..++++.. .+.-.|+.+ ++..++++.++|++||+++|.||+..+|+-.+ ..+....+
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG---~~fa~e~~ 643 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG---VESAWELL 643 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc---chhhHHhc
Confidence 456666653 234567777755 367778876 67889999999999999999999999997654 12233222
Q ss_pred hhcCCeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHH------HhhccccCCChhHHHHHHHHhCChhhH
Q 013839 256 LEDEHLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQ------IARAMYGSPPVHGILLVATILSDPNLK 328 (435)
Q Consensus 256 ~~~~~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~q~~~~~~l~~~~l~ 328 (435)
+....++ +++|.++ .| +.+|.+++ +++ +.+.+.. .....+++.++++..++.+.|+.-.
T Consensus 644 -gv~PDIi---~~gKgLt-gG~~Plaa~l~---~~~----I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~-- 709 (817)
T PLN02974 644 -GCKPDIA---CYAKLLT-GGLVPLAATLA---TEE----VFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYK-- 709 (817)
T ss_pred -CCCCCEE---eeccccc-CCCCccEEEEE---cHH----HHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHH--
Confidence 2222233 4799998 78 58888864 778 7666642 1123456677777777666654211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHhhCCCCCccccccCcceeEecCC---------C---HHHH-HHHhhhccE
Q 013839 329 SLWIDEVKIMADRIQRKRTTLRQN----LEKLGSSLNWEHITNQLGMFCFSGL---------T---PYQV-DRLAKEFHI 391 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~----l~~~~~~~~~~~~~~~~g~~~~~~~---------~---~~~~-~~ll~~~gI 391 (435)
+ .+......+..++..+.+.+. +++++. +......| ++.-+.+ + ...+ ..++.++||
T Consensus 710 ~--~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~---V~~VRg~G-l~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl 783 (817)
T PLN02974 710 D--PSTNPNLIPPGSRLRELWDEELVRAISSLPN---VERVVSLG-TVLALELDAEGSGSGYSSLYARSVVRRLRREDGI 783 (817)
T ss_pred c--ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCC---eeEEEeee-eEEEEEEecCCcccccchHHHHHHHHHHHHhCCE
Confidence 0 011122223333333333333 333331 22222333 2322211 0 1233 444427899
Q ss_pred EEeCCC---cEE-eccCCCCcHHHHHHHHHHHH
Q 013839 392 YMTQDG---RIS-MAGVTTGNVNYLANAIHEVT 420 (435)
Q Consensus 392 ~i~pgg---Ris-~~~~~~e~i~~~~~~l~~~l 420 (435)
.++|.| |+. ....+++++++++++|.+.+
T Consensus 784 ~~r~~Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 784 YARPLGNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 999976 543 22347899999999987764
No 363
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.14 E-value=4.8e-08 Score=97.90 Aligned_cols=247 Identities=14% Similarity=0.049 Sum_probs=146.5
Q ss_pred CCCCCCcccHHHHHHHHHhHcCCCC-cc--------ccCCCeeeEecCCchhHHHHHHHHHHH--hC-------------
Q 013839 86 LESISASVSTKMVEESVKLVYGKDS-DV--------VKEGRSAGVQALSGTGACRLFAEFQRR--FH------------- 141 (435)
Q Consensus 86 ~~Y~~~~g~~~lr~~ia~~l~~~~~-~~--------~~~~~v~~~~t~gg~~a~~~~~~~~~~--~~------------- 141 (435)
..|..+....++-+.+.+|+...-+ .+ -.++.-.+.+|+||+.|+..+.....- +.
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence 3344445556777777777622110 00 012233466899999998776522221 11
Q ss_pred ---------CCCEEEEcCCCChhhHHHHhhCCC---CeeeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCCC
Q 013839 142 ---------PESHIYFPDPTWSNHHNIWRDAQI---PERTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAHN 206 (435)
Q Consensus 142 ---------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~N 206 (435)
++..|++.+-.+......++..|. +++.+|+ .+++.+|++.|++.+.+. ..++.+|+-+..++
T Consensus 199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~--d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt 276 (522)
T TIGR03799 199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT--DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTT 276 (522)
T ss_pred hhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe--CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence 134678888788778778888887 6888888 345799999999998632 22334444446677
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh-hhcCCeEEEEecccccccccCCcccEEEEE
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF-LEDEHLIGCAQSYAKSMGLYGHRVGCLSIL 285 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~ 285 (435)
.||.+-+ +++|.++|+++|+++.+|.+|.....-. ...+.. .+...-+.+..+..|.++.| ..+|.+.
T Consensus 277 ~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~-----~~~r~~l~gle~aDSit~d~HK~l~~P-~g~G~ll-- 345 (522)
T TIGR03799 277 ETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLS-----NTYRHLLKGIERADSVTIDAHKQLYVP-MGAGMVL-- 345 (522)
T ss_pred CCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhC-----HHHHHHhcCchhCCEEEEChhhcCCcC-cccEEEE--
Confidence 8998765 5599999999999999999986543210 112121 12223467788999965423 4467775
Q ss_pred ecChhHHHHHHHHHHHHhhc-------------cccCCChh--HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 286 CVDSKQAAAIRSQIQQIARA-------------MYGSPPVH--GILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLR 350 (435)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~~-------------~~~~~~~~--~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 350 (435)
..+++ ..+.+.....+ .-.+-+.. ..+++...+. .+..+++.++..++++++.
T Consensus 346 vr~~~----~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG--------~~G~~~ii~~~~~la~~l~ 413 (522)
T TIGR03799 346 FKDPA----LMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIG--------RKGYELLIDQSIEKAKYFA 413 (522)
T ss_pred EeCHH----HHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHH
Confidence 33555 33333221000 00111111 1122222232 1456777788888889999
Q ss_pred HHHHhhC
Q 013839 351 QNLEKLG 357 (435)
Q Consensus 351 ~~l~~~~ 357 (435)
+.+++.+
T Consensus 414 ~~L~~~~ 420 (522)
T TIGR03799 414 DLIQQQP 420 (522)
T ss_pred HHHhhCC
Confidence 9998764
No 364
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.11 E-value=2.3e-08 Score=92.22 Aligned_cols=334 Identities=13% Similarity=0.111 Sum_probs=192.4
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhc--CCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCC
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA--GSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALS 125 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~g 125 (435)
++...+|+..|...-.-|... ++++..+.+++. ......|... -..++.++++..+-+. -..+. ++++
T Consensus 48 ~G~ryLD~f~Gi~tvslGHch-P~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~P~~------l~~vf--F~ns 117 (442)
T KOG1404|consen 48 EGRRYLDAFGGIVTVSLGHCH-PDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKLPGD------LKVVF--FVNS 117 (442)
T ss_pred CCceeehhhCCeEEEEcCCCC-hHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhCCCC------ceEEE--EecC
Confidence 456777777775322222222 234444555553 1123335442 2457888888887332 12344 8999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH-HhhCCCCeeeeee----------cCCCC----CCcC---------
Q 013839 126 GTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI-WRDAQIPERTYHY----------YDPDS----KSLD--------- 181 (435)
Q Consensus 126 g~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~v~~----------~~~~~----~~~d--------- 181 (435)
|++|++++..+..+....-.++....+|.+.... +...|......+. ..++- |+=+
T Consensus 118 GsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~ 197 (442)
T KOG1404|consen 118 GSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRY 197 (442)
T ss_pred CchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHH
Confidence 9999999975555544444566666677555433 2222222111110 00000 1111
Q ss_pred hHhHHHHhhcC-CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcC
Q 013839 182 FAALMDDIKNA-PDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDE 259 (435)
Q Consensus 182 ~e~l~~~i~~~-~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 259 (435)
.+++++.+... +....+++....+--.|++- ++-.+++..+.|+++|.+.|.||+..+|+..+ ..|...+.
T Consensus 198 a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG---~~wgfe~h---- 270 (442)
T KOG1404|consen 198 AKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG---HMWGFESH---- 270 (442)
T ss_pred HHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc---cccccccc----
Confidence 14455555433 34456777666666667654 66789999999999999999999998888764 23443222
Q ss_pred CeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHh-hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 013839 260 HLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIA-RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIM 338 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~ 338 (435)
+-+==+-|++|.+| .|..+|.++. .++ +.+-+.+.. ...+.+.++++..+..+.|+--. .+++
T Consensus 271 ~v~PDIvTmAKgiG-nG~Pl~AVvt---t~E----Ia~v~~~~~~~fnTyggnP~a~avg~aVL~Vik--------ee~L 334 (442)
T KOG1404|consen 271 GVVPDIVTMAKGIG-NGFPLGAVVT---TPE----IADVLNQKSSHFNTYGGNPVACAVGLAVLKVIK--------EENL 334 (442)
T ss_pred CCCccHHHHHhhcc-CCCcceeeec---CHH----HHHHHHhccccccccCCCchhHHHHHHHHHHHH--------HHhH
Confidence 21222558999999 8899999963 777 888887766 45566677776666666665321 2344
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCccccccC--cceeEecCC--------C-----HHHHHHHhhhccEEEeCCC------
Q 013839 339 ADRIQRKRTTLRQNLEKLGSSLNWEHITNQ--LGMFCFSGL--------T-----PYQVDRLAKEFHIYMTQDG------ 397 (435)
Q Consensus 339 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~g~~~~~~~--------~-----~~~~~~ll~~~gI~i~pgg------ 397 (435)
.++.++...+|.+.|.++.. ....+... -|.++=+.+ . ...+..-.++.|+.+-.||
T Consensus 335 qE~aa~vG~yl~~~l~~l~d--~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vf 412 (442)
T KOG1404|consen 335 QENAAEVGSYLLEKLAALKD--KHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVF 412 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhh--cCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEE
Confidence 55566666777777766532 11222222 233332211 0 1234333467999996665
Q ss_pred cEEec-cCCCCcHHHHHHHH
Q 013839 398 RISMA-GVTTGNVNYLANAI 416 (435)
Q Consensus 398 Ris~~-~~~~e~i~~~~~~l 416 (435)
||+.. ..|.+|++.+++..
T Consensus 413 riaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 413 RIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EecCCeeccHHHHHHHHHHH
Confidence 88742 24889997777655
No 365
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.04 E-value=5e-09 Score=100.15 Aligned_cols=254 Identities=13% Similarity=0.037 Sum_probs=134.4
Q ss_pred CCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCch
Q 013839 48 PSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGT 127 (435)
Q Consensus 48 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~ 127 (435)
++...+|+..|.-...-|. ..++..+++.+++... .. ........+...++++.+...-.. .-+++. ++++|+
T Consensus 14 dG~~~lD~~~~~~~~~lGh-~~p~i~~ai~~~~~~~-~~-~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~--f~~sGs 86 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGH-NHPEIAEAIAEQANKL-NY-VSFSGFTHPEAAELAEKLAELFPG--GLDRVF--FANSGS 86 (339)
T ss_dssp TSEEEEESSHHHHTTTT-B-T-HHHHHHHHHHHHHC-SS-CSTTTSEEHHHHHHHHHHHHHSST--TEEEEE--EESSHH
T ss_pred CCCEEEECCCCccceecCC-CccccchhHHHHhhhc-cc-ccccceeccchhhhhhhhhhcccc--ccceee--eccCch
Confidence 5678999987742111221 1223333333333321 11 111112223344444444211100 024666 899999
Q ss_pred hHHHHHHHHHH------HhCCCCEEEEcCCCChhhHHHHhh-CC---------C---CeeeeeecCCCC---CCcChHhH
Q 013839 128 GACRLFAEFQR------RFHPESHIYFPDPTWSNHHNIWRD-AQ---------I---PERTYHYYDPDS---KSLDFAAL 185 (435)
Q Consensus 128 ~a~~~~~~~~~------~~~~gd~Vlv~~p~y~~~~~~~~~-~g---------~---~~~~v~~~~~~~---~~~d~e~l 185 (435)
+|++.++.+.. ....-.+|+....+|.+....... .+ . .+..+|..+... ..-..+.+
T Consensus 87 eAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 166 (339)
T PF00202_consen 87 EAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNAL 166 (339)
T ss_dssp HHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHH
Confidence 99999975554 222337899999898765432221 11 1 123333311000 00001112
Q ss_pred HHHhhc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 186 MDDIKN-APDSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 186 ~~~i~~-~~~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
++.+.+ ..++..++++...+...|... +++.+++|.++|++||+++|.||+..++...+. .+....+ +....++
T Consensus 167 ~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~---~~a~~~~-gv~PDiv 242 (339)
T PF00202_consen 167 EELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK---FFASEHY-GVDPDIV 242 (339)
T ss_dssp HHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS---SSGHHHH-TSSSSEE
T ss_pred HHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC---ccceecc-cccCccc
Confidence 322221 125567777766665566655 677899999999999999999999998865442 1222222 3223333
Q ss_pred EEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhC
Q 013839 264 CAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILS 323 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 323 (435)
+ ++|.++ .|+.+|.+++ +++ +.+.+.......+.+.++++..++.+.|+
T Consensus 243 ~---~gK~l~-gG~p~sav~~---~~~----i~~~~~~~~~~~T~~g~p~~~aaa~~~l~ 291 (339)
T PF00202_consen 243 T---FGKGLG-GGLPISAVLG---SEE----IMEAFQPGSHGSTFGGNPLSCAAALATLE 291 (339)
T ss_dssp E---EEGGGG-TTSSEEEEEE---EHH----HHTTSCTTSSTCTTTT-HHHHHHHHHHHH
T ss_pred c---cccchh-hhhhcccccc---cch----hhccccccccccccccchHhhhhhhhHHH
Confidence 3 579998 7799998864 777 66655443334556666777777666664
No 366
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=1.2e-08 Score=93.83 Aligned_cols=328 Identities=12% Similarity=0.015 Sum_probs=188.3
Q ss_pred CCCCCeeeeecceecCCCCCcccchHHHHHHHHhc---CCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEec
Q 013839 47 DPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA---GSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQA 123 (435)
Q Consensus 47 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t 123 (435)
.++++++||+..+....-+.....+.....++... .+....|+..+-+-.+-+.||+++ |. ++.++ -
T Consensus 91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~-G~------E~aiv---Y 160 (467)
T KOG1358|consen 91 IDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM-GT------EDAIV---Y 160 (467)
T ss_pred ecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh-CC------cceee---e
Confidence 46788999999987454333333344344444442 234556888777889999999998 43 23343 4
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCC-------C--
Q 013839 124 LSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAP-------D-- 194 (435)
Q Consensus 124 ~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~-------~-- 194 (435)
+-|-.++..+ +-+++..||.+.+..-........++...-.+.++- .+ |.++++..+.+.. +
T Consensus 161 s~gF~ti~S~--ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fk---hn----dm~~lerll~E~~~~~~K~~k~~ 231 (467)
T KOG1358|consen 161 SYGFSTIESA--IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFK---HN----DMEDLERLLPEQEDEDQKNPKKA 231 (467)
T ss_pred ccccchhhhc--chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEec---CC----CHHHHHHhccCcchhhhhccccc
Confidence 4454455545 666788999998888666666555555444444442 22 6777776654321 1
Q ss_pred C-cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh--hhcCCeEEEEeccccc
Q 013839 195 S-SFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF--LEDEHLIGCAQSYAKS 271 (435)
Q Consensus 195 ~-~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~s~SK~ 271 (435)
. .+.+++.----+||.+.+. .+|+++..+|...+|.||.|+.-..+. ....+... .+..+-+++++|++-+
T Consensus 232 ~~Rrfiv~EGl~~N~g~i~pl---~~iv~lk~Kyk~RvildEs~SfG~lg~---~GrGvteH~~v~~~~iDiv~~sm~~a 305 (467)
T KOG1358|consen 232 LTRRFIVVEGLYANTGDICPL---PEIVKLKNKYKFRVILDESLSFGVLGK---TGRGVTEHFGVPITDIDIVTASMETA 305 (467)
T ss_pred cceEEEEEEeeccCCCccccc---HHHHHHHhhheEEEEEecccccccccc---cCccccccCCCCccceeeeeeccccc
Confidence 1 3556666666788888764 489999999999999999976544331 11122111 1234567899999998
Q ss_pred ccccCCcccEEEEEecChhHHHHHHHHHHHHhhcc---ccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 013839 272 MGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAM---YGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTT 348 (435)
Q Consensus 272 ~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 348 (435)
++..| |++++ +. ++-..+++.... ..+.|+....++..++.-. +......+.++.....
T Consensus 306 las~G---gFc~G---~~-----~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~-------~~~p~~~~~L~~k~~~ 367 (467)
T KOG1358|consen 306 LASGG---GFCAG---KS-----FIADHQRLSGSGYCFSASLPPYLAGAAIKAILIE-------EWNPEIVQPLRAKVAK 367 (467)
T ss_pred ccccC---ceeec---ce-----eeEeeeeccccceeeeccCchhhhhhHHHHHHHH-------hhCcchhhhhhccccc
Confidence 88666 78853 33 333344433221 1223333333333333211 2222344445555555
Q ss_pred HHHHHHhhCCCCCccccccCcceeEecCC-----C--------HHHHHHHhhhccEEEeCC-------------C-cEEe
Q 013839 349 LRQNLEKLGSSLNWEHITNQLGMFCFSGL-----T--------PYQVDRLAKEFHIYMTQD-------------G-RISM 401 (435)
Q Consensus 349 l~~~l~~~~~~~~~~~~~~~~g~~~~~~~-----~--------~~~~~~ll~~~gI~i~pg-------------g-Ris~ 401 (435)
+...|+.... +.+....-+....+.+ + .+.+.+.+.+ |+.++.. + ||++
T Consensus 368 ~H~~l~~~s~---~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~ 443 (467)
T KOG1358|consen 368 FHAALSSNSG---FIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICV 443 (467)
T ss_pred cchhhhcCCc---eEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEE
Confidence 5556654311 2222222222333322 1 1344555554 7777643 1 8987
Q ss_pred c-cCCCCcHHHHHHHHHHHHH
Q 013839 402 A-GVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 402 ~-~~~~e~i~~~~~~l~~~l~ 421 (435)
. .+++|+++++.+.|++...
T Consensus 444 ~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 444 SAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred eCCCCHHHHHHHHHHHHHHHH
Confidence 4 4588999999988887654
No 367
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.98 E-value=1.5e-07 Score=99.87 Aligned_cols=275 Identities=11% Similarity=0.020 Sum_probs=157.0
Q ss_pred cHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH-hCCC--CEEEEcCCCChhhHHHHh----hCCCC
Q 013839 94 STKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR-FHPE--SHIYFPDPTWSNHHNIWR----DAQIP 166 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~-~~~g--d~Vlv~~p~y~~~~~~~~----~~g~~ 166 (435)
+.++++.++++. |.+ .+++. ++.++|.+.+.+ +++. +.+| |+|++++-.|+.+...++ ..|++
T Consensus 150 l~~~Qt~ia~Lt-G~~-----~anaS--L~d~aTAaaea~--~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~Gie 219 (993)
T PLN02414 150 LLNYQTMITDLT-GLP-----MSNAS--LLDEGTAAAEAM--AMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLE 219 (993)
T ss_pred HHHHHHHHHHHh-CCC-----hhhEe--ecCChHHHHHHH--HHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCE
Confidence 456666777776 554 45777 899999998877 4333 4544 789999999988876654 46888
Q ss_pred eeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCc
Q 013839 167 ERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLD 246 (435)
Q Consensus 167 ~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~ 246 (435)
++.++.. .. + ... .....+++..| |-+|.+.+ +++|++.|+++|+++++ .+ +.+......
T Consensus 220 V~~v~~~-~~----~------~~~---~~v~~vlvq~P-~~~G~v~d---v~~I~~~ah~~GaL~iV-aa-d~lal~~l~ 279 (993)
T PLN02414 220 VVVADEK-DF----D------YSS---GDVCGVLVQYP-ATDGEVLD---YAEFVKNAHANGVKVVM-AT-DLLALTMLK 279 (993)
T ss_pred EEEecch-hh----c------ccc---CceEEEEEecC-CCCeEEcC---HHHHHHHHHHcCCEEEE-EE-CHHHhcCCC
Confidence 8887752 11 1 111 23334444222 34898864 66999999999999999 33 233332211
Q ss_pred ccHHHHHHhhhcCCeEEEEecccccc---cccCCcccEEEEEecChhHHHHHHHHHH-HHhh------------------
Q 013839 247 KDAQAIRIFLEDEHLIGCAQSYAKSM---GLYGHRVGCLSILCVDSKQAAAIRSQIQ-QIAR------------------ 304 (435)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~~s~SK~~---g~~G~RvG~~~~~~~~~~~~~~~~~~l~-~~~~------------------ 304 (435)
+ +..-+-+|++++..|.. |..|-+.|++.+ .++ +...+- .+..
T Consensus 280 ----~----pge~GADi~vgsgqKwg~P~G~GGP~aGflav---r~~----~~r~~PgriVG~s~d~~g~~~~~l~LqtR 344 (993)
T PLN02414 280 ----P----PGEWGADIVVGSAQRFGVPMGYGGPHAAFLAT---SQE----YKRLMPGRIIGVSVDSSGKPALRMAMQTR 344 (993)
T ss_pred ----C----HhhccCcEEEECCCccccCCCCCCCCeeEEEE---CHH----HHhhCCCcccCcccCCCCCcccccccccc
Confidence 1 12224577788888886 334566888863 555 322221 0000
Q ss_pred -----ccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc-cCcceeEec-CC
Q 013839 305 -----AMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT-NQLGMFCFS-GL 377 (435)
Q Consensus 305 -----~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~-~~ 377 (435)
.-..+.+.-+..++.+.+..-....+-...++++.++..++..++.+.|+..|. .... +..+.+.+- +
T Consensus 345 eqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~----~~~~~~~f~~vt~~~~- 419 (993)
T PLN02414 345 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGF----QVQSLPFFDTVKVKCS- 419 (993)
T ss_pred cchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCC----ccCCCCCcCeEEEecC-
Confidence 000111111111221222100000000144677788899999999999988763 2322 222223222 2
Q ss_pred CHHHHHHHhhhccEEEeCC--C--cEEeccC-CCCcHHHHHHHHHH
Q 013839 378 TPYQVDRLAKEFHIYMTQD--G--RISMAGV-TTGNVNYLANAIHE 418 (435)
Q Consensus 378 ~~~~~~~ll~~~gI~i~pg--g--Ris~~~~-~~e~i~~~~~~l~~ 418 (435)
+.+.+.+.|.++||.++.. + |+|+... +++||+.+++.|+.
T Consensus 420 ~~~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 420 DADAIADAAAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred CHHHHHHHHHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 3444544446789988643 2 8886433 77889999999863
No 368
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.96 E-value=2.3e-07 Score=98.91 Aligned_cols=270 Identities=13% Similarity=0.082 Sum_probs=157.1
Q ss_pred HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHH-hCCC--CEEEEcCCCChhhHHHH----hhCCCCe
Q 013839 95 TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRR-FHPE--SHIYFPDPTWSNHHNIW----RDAQIPE 167 (435)
Q Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~-~~~g--d~Vlv~~p~y~~~~~~~----~~~g~~~ 167 (435)
.++++.+++.. |.+ ..++. +..+++.+.+.+ ++++ +.++ |+|++++-.|+.....+ +..|+++
T Consensus 124 ~~~Qt~la~Lt-G~~-----~anaS--l~d~aTAa~ea~--~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev 193 (954)
T PRK05367 124 LNFQTMVADLT-GLE-----IANAS--LLDEATAAAEAM--ALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEV 193 (954)
T ss_pred HHHHHHHHHHH-CCC-----hhhcc--ccccHHHHHHHH--HHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEE
Confidence 34455555554 554 44666 788999888877 3333 4554 89999999998887654 5679999
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDK 247 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~ 247 (435)
+.++.. + |.+ . .++..+++.+| |-+|.+. ++++|++.|+++|+++++|.....+... .
T Consensus 194 ~~~~~~-~-----d~~------~---~~~~~vlvq~p-~~~G~i~---d~~~i~~~ah~~Gal~~vda~~~Al~~l---~ 251 (954)
T PRK05367 194 VVGDAA-K-----ALD------H---DDVFGVLLQYP-GTSGEVR---DYTALIAAAHARGALVAVAADLLALTLL---T 251 (954)
T ss_pred EEecCc-c-----CCC------c---ccEEEEEEecC-CCCeeec---cHHHHHHHHHHcCCEEEEEehhhhccCC---C
Confidence 888762 2 111 1 34555666554 6788876 4779999999999999998643222221 1
Q ss_pred cHHHHHHhhhcCCeEEEEecccccc---cccCCcccEEEEEecChhHHHHHHHHHHHH-h--------------------
Q 013839 248 DAQAIRIFLEDEHLIGCAQSYAKSM---GLYGHRVGCLSILCVDSKQAAAIRSQIQQI-A-------------------- 303 (435)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~s~SK~~---g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-~-------------------- 303 (435)
+ ++.-+-+|++++..|.. |+.|-..|++.+ .++ +...+.-. .
T Consensus 252 ~-------pge~GaDi~vgs~qkfg~P~g~GGP~aGflav---r~~----~~r~lpgrivG~s~d~~g~~~~~lalqtRe 317 (954)
T PRK05367 252 P-------PGEMGADIAVGSAQRFGVPMGFGGPHAAYFAV---RDA----YKRSMPGRIVGVSVDAAGNPALRLALQTRE 317 (954)
T ss_pred C-------hhhcCCCEEEeeCcccCCCCCCCCCCEEEEEE---CHH----HHhhCCCCeeeeecccCCCccccccccccc
Confidence 1 12234578888888871 223444788853 555 33332100 0
Q ss_pred ---h--ccccCCChh-HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc-CcceeEe-c
Q 013839 304 ---R--AMYGSPPVH-GILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN-QLGMFCF-S 375 (435)
Q Consensus 304 ---~--~~~~~~~~~-~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~~-~ 375 (435)
+ ..+++..+. ...++.+.+- +..+-...++++.++...+..++.+.|+..|. ....+ ..+.+.+ .
T Consensus 318 qhiRrekaTsNict~qaL~a~~a~~y---~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~----~~~~~~~f~~~~~~~ 390 (954)
T PRK05367 318 QHIRREKATSNICTAQVLLAVMASMY---AVYHGPEGLKAIARRVHRLAAILAAGLRALGL----EVVHDSFFDTLTVEV 390 (954)
T ss_pred ccccccccccccchHHHHHHHHHHHH---HHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCc----ccCCCCCCCeEEEeC
Confidence 0 011111111 0111111100 00011256788888899999999999987664 22211 1122221 1
Q ss_pred CCCHHHHHHHhhhccEEEeCC--C--cEEeccC-CCCcHHHHHHHHH
Q 013839 376 GLTPYQVDRLAKEFHIYMTQD--G--RISMAGV-TTGNVNYLANAIH 417 (435)
Q Consensus 376 ~~~~~~~~~ll~~~gI~i~pg--g--Ris~~~~-~~e~i~~~~~~l~ 417 (435)
+.+.+.+.+.|.++||.+..- + |+|+... ++++|+.+++.|.
T Consensus 391 ~~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 391 GGDAAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred CCCHHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 225555544446789988543 2 8887433 6788999999986
No 369
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.94 E-value=8.5e-07 Score=80.17 Aligned_cols=342 Identities=13% Similarity=0.051 Sum_probs=191.7
Q ss_pred CCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhc----CCCCCC----CCCCcccHH-HHHHHHHh
Q 013839 34 KDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIA----GSEFLE----SISASVSTK-MVEESVKL 104 (435)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----Y~~~~g~~~-lr~~ia~~ 104 (435)
.++++.+..++. ...++|-|.-+.. . ..|.....+...... ...+.+ -.+...+++ +-..++-.
T Consensus 16 ~dpl~~lr~~f~--lp~~viyLdgnSL---G--a~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApL 88 (407)
T COG3844 16 ADPLAKLRDRFA--LPGGVIYLDGNSL---G--ARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPL 88 (407)
T ss_pred cCchhhhHhhcc--CCCCeEEeecccc---c--cCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhh
Confidence 345666666663 4567888877663 1 122222222222221 111111 233444443 23333333
Q ss_pred HcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHh--CCCCEEEEcCCCChhh-----HHHHhhCCCCeeeeeecCCCC
Q 013839 105 VYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRF--HPESHIYFPDPTWSNH-----HNIWRDAQIPERTYHYYDPDS 177 (435)
Q Consensus 105 l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~--~~gd~Vlv~~p~y~~~-----~~~~~~~g~~~~~v~~~~~~~ 177 (435)
+ |.. +++++ ++.+.+--++.. +.+.+ .+|++|++++-.-.+. ...+...|.. +.+ .
T Consensus 89 i-GA~-----~~Evv--v~dtts~nl~k~--L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~----~ 151 (407)
T COG3844 89 I-GAR-----AGEVV--VTDTTSINLFKV--LAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL----E 151 (407)
T ss_pred h-cCC-----CCceE--EeCCcchHHHHH--HHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc----e
Confidence 3 332 56777 666666555555 44433 4689999988433222 1222333322 111 1
Q ss_pred CCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhh
Q 013839 178 KSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLE 257 (435)
Q Consensus 178 ~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~ 257 (435)
..+++++++++++ +++.++++++.+.-||..+. +.+|..++++||++++.|-++..-... +. ..
T Consensus 152 ~~~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGavp--------~~--Lh 215 (407)
T COG3844 152 GVIAPRALEEAIT---DDVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAVP--------VD--LH 215 (407)
T ss_pred eeeChHHHHHhhc---cceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCcc--------ee--ec
Confidence 2457778999998 78999999999999999985 559999999999999999996543322 10 12
Q ss_pred cCCeEEEEeccccccc-ccCCcccEEEEEecChhHHHHHHHHHH-------------------HHhhccccCCChhHHHH
Q 013839 258 DEHLIGCAQSYAKSMG-LYGHRVGCLSILCVDSKQAAAIRSQIQ-------------------QIARAMYGSPPVHGILL 317 (435)
Q Consensus 258 ~~~~~i~~~s~SK~~g-~~G~RvG~~~~~~~~~~~~~~~~~~l~-------------------~~~~~~~~~~~~~~q~~ 317 (435)
..+-.+-+++.-|.+. -||- .+++.+ .+++.+.....+. -..+..-.+++.++..+
T Consensus 216 ~~gaDfaigcsyKYLNgGPGa-pa~l~v---~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aa 291 (407)
T COG3844 216 AAGADFAIGCSYKYLNGGPGA-PAGLFV---APRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAA 291 (407)
T ss_pred ccCCCeeeeeeceeccCCCCC-ceeEEe---ccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHH
Confidence 2345677888888873 2443 344432 3332222211110 01112223444555555
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccC-----cceeEecCCCHHHHHHHhhhccEE
Q 013839 318 VATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQ-----LGMFCFSGLTPYQVDRLAKEFHIY 392 (435)
Q Consensus 318 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~ll~~~gI~ 392 (435)
+...|.- +.. -.+.+.|++-....+++.+.++......++...+|. |+=..+.--....+.+.|.++||.
T Consensus 292 l~~aLDi---fa~--~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rGVi 366 (407)
T COG3844 292 LEGALDI---FAD--VDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRGVI 366 (407)
T ss_pred Hhhhhhh---hhh--cCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcCcc
Confidence 5455532 222 236788888888889999888765432233333332 221222222456665556778987
Q ss_pred Ee---CCC-cEEecc--CCCCcHHHHHHHHHHHHHhhh
Q 013839 393 MT---QDG-RISMAG--VTTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 393 i~---pgg-Ris~~~--~~~e~i~~~~~~l~~~l~~~~ 424 (435)
.- |+- |+.|+. .+.+|+-.+++.|.+++++..
T Consensus 367 gD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 367 GDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred ccccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 62 332 998753 378999999999999997653
No 370
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.93 E-value=2.6e-09 Score=88.92 Aligned_cols=65 Identities=8% Similarity=0.027 Sum_probs=56.0
Q ss_pred CCCCCcccHHHHHHHHHhHcCCCC--ccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChh
Q 013839 87 ESISASVSTKMVEESVKLVYGKDS--DVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSN 155 (435)
Q Consensus 87 ~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~ 155 (435)
.|.+..|.++||+++++++....+ ..+++++|+ +|.|+++++.++ +..+++|||.|++++|+|++
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Iv--vt~Ga~~al~~l--~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIV--LSAGATAANEII--MFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheE--EcCCHHHHHHHH--HHHHcCCCCEEEEeCCCCCC
Confidence 388999999999999999954433 345688999 999999999998 78889999999999999963
No 371
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.91 E-value=3e-07 Score=88.80 Aligned_cols=269 Identities=15% Similarity=0.066 Sum_probs=152.0
Q ss_pred cccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHc---CCCCccccCCCeeeEecCCchhHHHHHHHHHH-Hh--
Q 013839 67 PVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVY---GKDSDVVKEGRSAGVQALSGTGACRLFAEFQR-RF-- 140 (435)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~---~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~-~~-- 140 (435)
+.+...+.+++....+.....|.......++-+.+.+++. +........+.-.+.+|.||++|+..+..... .+
T Consensus 50 ~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~ 129 (373)
T PF00282_consen 50 PSPASILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALP 129 (373)
T ss_dssp -CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhh
Confidence 3344555555555554434555555556677777777762 33211000112446689999999877642111 11
Q ss_pred ---CCC-----C-EEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCCCCC
Q 013839 141 ---HPE-----S-HIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAHNPT 208 (435)
Q Consensus 141 ---~~g-----d-~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~NPt 208 (435)
..| + .|++.+-++......+...|+.++.||+. + ++.+|+++|++++.+. +..+.+|+.+.....|
T Consensus 130 ~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~-~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~ 207 (373)
T PF00282_consen 130 RSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTD-E-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNT 207 (373)
T ss_dssp HHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BB-T-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTT
T ss_pred hhhhcccccccccccccccccccHHHHhcceeeeEEEEecCC-c-chhhhHHHhhhhhcccccccccceeeeccCCCccc
Confidence 112 2 45566657778888999999999999983 3 6789999999998653 1224456666677778
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHh-hhcCCeEEEEecccccccccCCcccEEEEEec
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIF-LEDEHLIGCAQSYAKSMGLYGHRVGCLSILCV 287 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~ 287 (435)
|.+ +++++|.++|+++++|+-+|.+|.+..+-.. ..+.. .....-.=+.-+++|.++.| ..+|++. ..
T Consensus 208 Ga~---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~-----~~~~~~~gi~~adSit~d~HK~l~~P-~~~~~~l--~r 276 (373)
T PF00282_consen 208 GAI---DPLEEIADICEKYNIWLHVDAAYGGSALLSP-----EYRHLLFGIERADSITIDPHKWLGVP-YGCGVLL--VR 276 (373)
T ss_dssp SBB----SHHHHHHHHHHCT-EEEEEETTGGGGGGHC-----TTGGGGTTGGGESEEEEETTTTTS-S-SS-EEEE--ES
T ss_pred ccc---cCHHHHhhhccccceeeeecccccccccccc-----cccccccccccccccccchhhhhcCC-ccceeEE--ee
Confidence 765 7788999999999999999999987332100 11111 11122234456889999854 6788885 44
Q ss_pred ChhHHHHHHHHHH----HHhh-------------ccccCCChhHHHHHHHHh--CChhhHHHHHHHHHHHHHHHHHHHHH
Q 013839 288 DSKQAAAIRSQIQ----QIAR-------------AMYGSPPVHGILLVATIL--SDPNLKSLWIDEVKIMADRIQRKRTT 348 (435)
Q Consensus 288 ~~~~~~~~~~~l~----~~~~-------------~~~~~~~~~~q~~~~~~l--~~~~l~~~~~~~~~~~~~~~~~~~~~ 348 (435)
++. ...... .+.. ..+...+. ...++..++ ..-+ .+..++..++..+..++
T Consensus 277 ~~~----~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G-----~~G~~~~i~~~~~~a~~ 346 (373)
T PF00282_consen 277 DKS----DLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLG-----REGYRERIRRCIELARY 346 (373)
T ss_dssp SGG----GHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH
T ss_pred ccc----chHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHHHHhcC-----HHHHHHHHHHHHHHHHH
Confidence 655 222111 0000 01112233 223332222 1111 14566777777888889
Q ss_pred HHHHHHhhCC
Q 013839 349 LRQNLEKLGS 358 (435)
Q Consensus 349 l~~~l~~~~~ 358 (435)
+.+.+++.+.
T Consensus 347 l~~~l~~~~~ 356 (373)
T PF00282_consen 347 LADRLRKDPR 356 (373)
T ss_dssp HHHHHHTSTT
T ss_pred HHHHHHhCCC
Confidence 9999988763
No 372
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.84 E-value=3e-06 Score=77.65 Aligned_cols=316 Identities=14% Similarity=0.123 Sum_probs=186.2
Q ss_pred HhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHH-HHH--hCCCCEEEEcCCCChh
Q 013839 79 KIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEF-QRR--FHPESHIYFPDPTWSN 155 (435)
Q Consensus 79 ~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~-~~~--~~~gd~Vlv~~p~y~~ 155 (435)
++..+ ...|..+.+...|.+++.+.+ |.. .+. .|.-|-+|-.++..+ +.. ..||.+..+++..|.-
T Consensus 67 amm~G-DEAYagsrs~~~L~~avkdif-Gfq-------~~i--PthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~Fd 135 (471)
T COG3033 67 AMMRG-DEAYAGSRSYYALADAVKDIF-GFQ-------YTI--PTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFD 135 (471)
T ss_pred HHhcc-chhhcccccHHHHHHHHHHhc-Cce-------eee--eccCCccHHHHHHHHHhhhccccCCccccccccceec
Confidence 34445 445988999999999888876 432 334 578888777666322 211 1255566677766643
Q ss_pred h-HHHHhhCCCCeeeeeecCCC--------CCCcChHhHHHHhhcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 013839 156 H-HNIWRDAQIPERTYHYYDPD--------SKSLDFAALMDDIKNAPD--SSFFLLHPSAHNPTGVDPTEEQWREISYQF 224 (435)
Q Consensus 156 ~-~~~~~~~g~~~~~v~~~~~~--------~~~~d~e~l~~~i~~~~~--~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~ 224 (435)
. ....+..|+.++.++..... -+.+|++.|++.+++.+. -+-+++....|.-.|.-.|.+.++++.++|
T Consensus 136 TTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia 215 (471)
T COG3033 136 TTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIA 215 (471)
T ss_pred chhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHH
Confidence 3 44566788888777653111 156899999999987532 234444455566779999999999999999
Q ss_pred HhcCceeeeecc-CCCccC----CCCcccHHHHHHhhhc--CCeEEEEecccccccccCCcccEEEEEecChhHHHHHHH
Q 013839 225 KVKGHFPFFDMA-YQGFAS----GDLDKDAQAIRIFLED--EHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRS 297 (435)
Q Consensus 225 ~~~~~~vi~Dea-y~~~~~----~~~~~~~~~~~~~~~~--~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~ 297 (435)
++|++.++.|.+ |.+..+ .+.....+++...... .-.+-+..|..|-. +.-+ .|++.. ..+...++..
T Consensus 216 ~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~-lvnm-GGfl~~---~D~~~fDvy~ 290 (471)
T COG3033 216 KKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDG-LVNM-GGFLCF---KDDSFFDVYE 290 (471)
T ss_pred HHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccc-eecc-ccEEEe---cCccHHHHHH
Confidence 999999999988 332222 0111123444433211 01123445666652 2222 156643 4443333555
Q ss_pred HHHHHhh-----ccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCccee
Q 013839 298 QIQQIAR-----AMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMF 372 (435)
Q Consensus 298 ~l~~~~~-----~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~ 372 (435)
.++...- ..+.+...-...+++.-|.+.- -.+++.. |.. ..++|.+.|.+.|. .+..|.||=-
T Consensus 291 ~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~----~~~yl~~---Rv~-Qv~YL~~~l~~~GV----pi~~paGGHa 358 (471)
T COG3033 291 ECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGV----NFDYLAH---RVA-QVQYLADGLEEAGV----PIVQPAGGHA 358 (471)
T ss_pred HHHhheEeeccccccCcccchhHHHHHHHHHHhc----CcHHHHH---HHH-HHHHHHHHHHhcCC----eeEecCCCce
Confidence 4544321 2344455444455544444321 0122322 232 23678889999884 4666667655
Q ss_pred EecCC------------CH-HHHHHHhhhccEEEeCCC---------------------cEEecc--CCCCcHHHHHHHH
Q 013839 373 CFSGL------------TP-YQVDRLAKEFHIYMTQDG---------------------RISMAG--VTTGNVNYLANAI 416 (435)
Q Consensus 373 ~~~~~------------~~-~~~~~ll~~~gI~i~pgg---------------------Ris~~~--~~~e~i~~~~~~l 416 (435)
+|++. .. .+...+.++.||-...-| |+.+.. .+.+-++..++++
T Consensus 359 vfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~ 438 (471)
T COG3033 359 VFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAF 438 (471)
T ss_pred EEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHH
Confidence 55532 22 245667788999887532 776532 2567789999999
Q ss_pred HHHHHh
Q 013839 417 HEVTRS 422 (435)
Q Consensus 417 ~~~l~~ 422 (435)
+++.+.
T Consensus 439 ~~l~e~ 444 (471)
T COG3033 439 KALKEN 444 (471)
T ss_pred HHHHhc
Confidence 888764
No 373
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.84 E-value=2.7e-07 Score=82.21 Aligned_cols=285 Identities=14% Similarity=0.123 Sum_probs=162.0
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHH-Hh------hCCC-----Ceeee-eecCC----------C--
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNI-WR------DAQI-----PERTY-HYYDP----------D-- 176 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~-~~------~~g~-----~~~~v-~~~~~----------~-- 176 (435)
++++|++|..+++.+..-+.....|++.+-.|.++... ++ ..|. +.+.| |+.|. +
T Consensus 107 F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a 186 (452)
T KOG1403|consen 107 FVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDA 186 (452)
T ss_pred EecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcc
Confidence 89999999999976666565555566667777666432 11 1111 12222 22110 0
Q ss_pred C-CCcChHhHHHHhhc---CCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHH
Q 013839 177 S-KSLDFAALMDDIKN---APDSSFFLLHPSAHNPTGVDPTEE-QWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQA 251 (435)
Q Consensus 177 ~-~~~d~e~l~~~i~~---~~~~~~~v~~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~ 251 (435)
+ ...-.+++++.+.. ......+++-.+-+.=.|.++++. ..+++++..+.+|-+.|.||+.-+|+.-+ ...|+
T Consensus 187 ~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG--~hyWa 264 (452)
T KOG1403|consen 187 DMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVG--SHYWA 264 (452)
T ss_pred cchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccc--hhhhh
Confidence 0 00112334443332 123445555555556667777555 57899999999999999999987777644 45666
Q ss_pred HHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhh--ccccCCChhHHHHHHHHhCChhhHH
Q 013839 252 IRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIAR--AMYGSPPVHGILLVATILSDPNLKS 329 (435)
Q Consensus 252 ~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~q~~~~~~l~~~~l~~ 329 (435)
...+.= -.. +-++.|.+| .|..++.++ + .++ +.+++..... ..+.+-++.+..+..+.+..-+
T Consensus 265 fq~y~f--iPD--IVtmgKpmG-NGhPVa~Va--t-tke----IA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e--- 329 (452)
T KOG1403|consen 265 FQTYNF--IPD--IVTMGKPMG-NGHPVAAVA--T-TKE----IAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCE--- 329 (452)
T ss_pred hhhhcc--ccc--hheecccCC-CCCeeeEEe--c-cHH----HHHHhccccceehhccCCCchhHHHHHHHHHHHh---
Confidence 654421 112 335789999 999999885 3 777 8887765221 3455666666666555554221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCc--ceeEecCC---------CH---H-HHHHHhhhccEEEe
Q 013839 330 LWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQL--GMFCFSGL---------TP---Y-QVDRLAKEFHIYMT 394 (435)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~--g~~~~~~~---------~~---~-~~~~ll~~~gI~i~ 394 (435)
-+...+..++.-++|...|+++.. ...++..-. |.|+-+++ +. . .+.+|.+.++|.+.
T Consensus 330 -----~E~Lq~ha~~vG~~L~~lL~~~k~--kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLls 402 (452)
T KOG1403|consen 330 -----DENLQEHAQQVGEKLEVLLRRLKQ--KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLS 402 (452)
T ss_pred -----hhhHHHHHHHHHHHHHHHHHHHhh--hccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEe
Confidence 112222233333344444443321 123444333 44444433 11 1 23566566789998
Q ss_pred CCC----------cEEeccCCCCcHHHHHHHHHHHHHhhhhhhccccccC
Q 013839 395 QDG----------RISMAGVTTGNVNYLANAIHEVTRSEQETAKILCSIS 434 (435)
Q Consensus 395 pgg----------Ris~~~~~~e~i~~~~~~l~~~l~~~~~~~~~~~~~~ 434 (435)
..| -++| ++++.++.+..|.+++.-+. +...+|.++
T Consensus 403 aDGPh~NilKiKPPmCF---neena~e~v~~ld~iLT~me-e~~~s~t~~ 448 (452)
T KOG1403|consen 403 ADGPHRNILKIKPPMCF---NEENADEFVLGLDEILTVME-ERLASATSA 448 (452)
T ss_pred cCCCCCceeecCCCccc---ChhhHHHHHHHHHHHHHHHH-HHHhhhhhh
Confidence 776 2333 78999999999999887433 444555543
No 374
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.78 E-value=3.4e-06 Score=79.98 Aligned_cols=358 Identities=14% Similarity=0.124 Sum_probs=195.3
Q ss_pred CCCCchhhHHHHHhcCCCCCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCc
Q 013839 32 AAKDPINGVTEAFLADPSPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSD 111 (435)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~ 111 (435)
.+.+.+.+++++....++....++..|.- ..+.+.....+.++...+..-....|+- ...+-.+..+.+.+.-..
T Consensus 61 l~~d~v~~~i~~~~~ld~~~~~~~vS~~v--~~~~~~~~~l~~~~~~k~N~l~~d~fp~---~~~~e~~~Vnm~~~L~~~ 135 (491)
T KOG1383|consen 61 LPKDAVLELINDELMLDGNPRLGLASGVV--YWGEPELDKLIMEAYNKFNPLHPDEFPV---VRKLEAECVNMIANLFNA 135 (491)
T ss_pred CCHHHHHHHHHHHhccCCCcccCeeeEEE--ecCCcchhhHHHHHHhhcCccCccccch---hHHHHHHHHHHHHHHhcC
Confidence 35566777777776544444455555542 1222334444444444432112222433 334444444443211111
Q ss_pred cccCCCeeeEecCCchhHHHHHHH-HHHH-hC-CC---CEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhH
Q 013839 112 VVKEGRSAGVQALSGTGACRLFAE-FQRR-FH-PE---SHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAAL 185 (435)
Q Consensus 112 ~~~~~~v~~~~t~gg~~a~~~~~~-~~~~-~~-~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l 185 (435)
++..++..|.||+++..++-. -... .. .| ..++++.-....+....+..+.+...||+ ++.++.+|+...
T Consensus 136 ---~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~-~~~~~~~D~~k~ 211 (491)
T KOG1383|consen 136 ---PSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPL-DEGDYRVDPGKV 211 (491)
T ss_pred ---CccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeec-cccceEecHHHH
Confidence 122456679999999433321 1111 11 23 34555555556666777788889999998 567899999999
Q ss_pred HHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh-cCceeeeeccCCCccCC-CCcccHHHHHHhhhcCCeEE
Q 013839 186 MDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKV-KGHFPFFDMAYQGFASG-DLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 186 ~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~vi~Deay~~~~~~-~~~~~~~~~~~~~~~~~~~i 263 (435)
.+.++ ..+..++..-|+.|+|.. ++.++|.++..+ +++++-+|.+-.+|.-. .. .....+ +.....+
T Consensus 212 ~~~i~---eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~----~~~~~f-dFr~p~V 280 (491)
T KOG1383|consen 212 VRMID---ENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGY----LNEEEF-DFRVPGV 280 (491)
T ss_pred HHHhc---cceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccc----cCcccc-ccCCCCc
Confidence 99998 788999999999999965 778899999888 99999999997666642 00 000001 1111111
Q ss_pred -EE-eccccc-ccccCCcccEEEEEecChhHHHHHHH-HHH---H----HhhccccC-----CChhHHHHHHHHhCChhh
Q 013839 264 -CA-QSYAKS-MGLYGHRVGCLSILCVDSKQAAAIRS-QIQ---Q----IARAMYGS-----PPVHGILLVATILSDPNL 327 (435)
Q Consensus 264 -~~-~s~SK~-~g~~G~RvG~~~~~~~~~~~~~~~~~-~l~---~----~~~~~~~~-----~~~~~q~~~~~~l~~~~l 327 (435)
.+ .+-+|. +.++| .||++. ++++ +.. ++. + .....+.+ ....+|++....+..
T Consensus 281 ~Sisa~~HKYGl~~~G--~~~vl~--r~k~----~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~--- 349 (491)
T KOG1383|consen 281 TSISADGHKYGLAPAG--SSWVLY--RNKE----LLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGE--- 349 (491)
T ss_pred eeEeeccceeeeeecC--cEEEEE--cccc----cccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhH---
Confidence 11 122333 34445 688863 3555 211 110 0 00111112 223444444444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc-cCcceeEecC--CCHHHHHHHhhhccEEEeC----CC-cE
Q 013839 328 KSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHIT-NQLGMFCFSG--LTPYQVDRLAKEFHIYMTQ----DG-RI 399 (435)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~--~~~~~~~~ll~~~gI~i~p----gg-Ri 399 (435)
+...+..++..+....|++.++..+. +.... |.-.+.+|-. ++.-.+..+|.+.|..+.. .+ -|
T Consensus 350 -----eGY~~~~~~ive~~~~l~egie~i~~---i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P~a~Hi 421 (491)
T KOG1383|consen 350 -----EGYRENTQNIVETARKLREGIENIKG---IKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQFPAAIHI 421 (491)
T ss_pred -----HHHHHHHHHHHHHHHHHHHhhhcccc---ceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccCCCCceEE
Confidence 33344445566677778888877642 33333 3333333332 2333456667788887753 23 33
Q ss_pred Eecc--CCCCcHHHHHHHHHHHHHhhhhhhc
Q 013839 400 SMAG--VTTGNVNYLANAIHEVTRSEQETAK 428 (435)
Q Consensus 400 s~~~--~~~e~i~~~~~~l~~~l~~~~~~~~ 428 (435)
++.. ..++-.++++.-|+++++++....+
T Consensus 422 ~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~ 452 (491)
T KOG1383|consen 422 CVTRVHAREDVADRFVADIRKVVEELKSLPE 452 (491)
T ss_pred EEEeeeccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3321 1344468888999999988775443
No 375
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.77 E-value=2.4e-07 Score=84.70 Aligned_cols=270 Identities=17% Similarity=0.201 Sum_probs=162.4
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcC---CCChhhHHHH--hhCC-----CCeeeeeecCCCCCCcChHhHHHHhhc
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPD---PTWSNHHNIW--RDAQ-----IPERTYHYYDPDSKSLDFAALMDDIKN 191 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~---p~y~~~~~~~--~~~g-----~~~~~v~~~~~~~~~~d~e~l~~~i~~ 191 (435)
...+|+-|++.+ ..+++.|+|+++-.+ .++-.+.-.. +..- ++-.+|.+ ++.++-+|.|.|++....
T Consensus 111 Qp~SGSPANfav--Ytall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv-~~~TG~IDYD~Le~~A~~ 187 (477)
T KOG2467|consen 111 QPYSGSPANFAV--YTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKV-DPSTGYIDYDKLEKTATL 187 (477)
T ss_pred ccCCCCchhhHH--HhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceee-CCCCCceehHHHHHHHHh
Confidence 577888898888 788899999998555 3332221111 1111 12233444 466788999999987653
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccC-CCccCCCCcccHHHHHHhhhcCCeEEEEecccc
Q 013839 192 APDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAY-QGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAK 270 (435)
Q Consensus 192 ~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK 270 (435)
-++++++-.....|- .-|-.++.++|.+.|++++.|.++ +++.-.+. -+.++ .-.+|+..+..|
T Consensus 188 --frPk~iiaG~SaY~R-----~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~v--ipsPF------ey~DiVTTTTHK 252 (477)
T KOG2467|consen 188 --FRPKLIIAGTSAYSR-----LIDYARFRKIADKVGAYLMADMAHISGLVAAGV--IPSPF------EYCDIVTTTTHK 252 (477)
T ss_pred --cCCcEEEeccccchh-----hccHHHHHHHHHhcCceeehhhhhHHHHHhccc--CCCcc------cccceeeccccc
Confidence 466788743322222 224567888888999999999996 22332211 00111 235788899999
Q ss_pred cccccCCcccEEEEEec-----C-h---hHHHHHHHHHHHHhhc-cccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 013839 271 SMGLYGHRVGCLSILCV-----D-S---KQAAAIRSQIQQIARA-MYGSPPVHGILLVATILSDPNLKSLWIDEVKIMAD 340 (435)
Q Consensus 271 ~~g~~G~RvG~~~~~~~-----~-~---~~~~~~~~~l~~~~~~-~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~ 340 (435)
.+ .|-|.|.+.. -. + + +..-++-+++.....+ .-.+|......+++.+|+... .-..+++.+
T Consensus 253 sL--RGPRg~mIFy-RkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~-----tpefk~Yq~ 324 (477)
T KOG2467|consen 253 SL--RGPRGAMIFY-RKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM-----TPEFKEYQK 324 (477)
T ss_pred cc--cCCcceeEEE-eccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC-----CHHHHHHHH
Confidence 96 6888777653 11 0 0 1112234444443332 234555555566666776432 134567777
Q ss_pred HHHHHHHHHHHHHHhhCCCCCccccccCcceeE--ec----CCCHHHHHHHhhhccEEEe------------CCC-cEEe
Q 013839 341 RIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFC--FS----GLTPYQVDRLAKEFHIYMT------------QDG-RISM 401 (435)
Q Consensus 341 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~--~~----~~~~~~~~~ll~~~gI~i~------------pgg-Ris~ 401 (435)
+..++...|.+.|.+.|. +......-.++ |- |++...+++.++.-+|.+- ||| ||..
T Consensus 325 qV~~Nakala~~l~~~Gy----~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGt 400 (477)
T KOG2467|consen 325 QVLKNAKALASALISRGY----KLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGT 400 (477)
T ss_pred HHHHHHHHHHHHHHHcCc----eEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccc
Confidence 888888899999998885 33333222233 32 6688888888887888763 445 8863
Q ss_pred c-----cCCCCcHHHHHHHHHHHHH
Q 013839 402 A-----GVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 402 ~-----~~~~e~i~~~~~~l~~~l~ 421 (435)
. +..++|+++..+-|.+.++
T Consensus 401 PAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 401 PAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred hhhcccCccHHHHHHHHHHHHHHHH
Confidence 2 2346778777777766654
No 376
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.76 E-value=1.6e-06 Score=78.51 Aligned_cols=214 Identities=14% Similarity=0.065 Sum_probs=143.3
Q ss_pred ChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcC
Q 013839 181 DFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPT-EEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDE 259 (435)
Q Consensus 181 d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 259 (435)
|.+.|+.+++. +..+++++..-+-..|++.+ +..+++..++|++|+.++|.||+..++...+. .+... +....
T Consensus 195 d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk---~la~d-~env~ 268 (427)
T KOG1402|consen 195 DAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK---LLACD-YENVR 268 (427)
T ss_pred CHHHHHHHhcC--CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc---EEEee-hhhcC
Confidence 78999999984 67788888888999999875 45699999999999999999999888776541 11110 11111
Q ss_pred CeEEEEecccccccccC-CcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHH
Q 013839 260 HLIGCAQSYAKSMGLYG-HRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIM 338 (435)
Q Consensus 260 ~~~i~~~s~SK~~g~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~ 338 (435)
. ++++ +.|.++ .| +.++.+. | +++ ++..++......+.+-++++.+++.++|+-- .-+..
T Consensus 269 P-Divi--lgKalS-GG~~Pvsavl--~-~~~----im~~~~pgeHgsTyggNpLg~~vaiAalevi--------~eekL 329 (427)
T KOG1402|consen 269 P-DIVI--LGKALS-GGVYPVSAVL--A-DDD----IMLNIKPGEHGSTYGGNPLGCAVAIAALEVI--------VEEKL 329 (427)
T ss_pred C-CeEE--Eecccc-CCeeeeEEEE--e-cHH----HHhccCCCccccccCCChHHHHHHHHHHHHH--------HHHHH
Confidence 1 2222 567776 33 3355443 4 777 8777776666677888888888888887532 12456
Q ss_pred HHHHHHHHHHHHHHHHhhCCCC--CccccccCcceeEecCC--------C-HHHHHHHhhhccEEEeCCC----cEEec-
Q 013839 339 ADRIQRKRTTLRQNLEKLGSSL--NWEHITNQLGMFCFSGL--------T-PYQVDRLAKEFHIYMTQDG----RISMA- 402 (435)
Q Consensus 339 ~~~~~~~~~~l~~~l~~~~~~~--~~~~~~~~~g~~~~~~~--------~-~~~~~~ll~~~gI~i~pgg----Ris~~- 402 (435)
.++....-+.++..|..+..+. -++.... -|++.-+-+ + .+.+. .+++.|+..-|-. ||...
T Consensus 330 ~era~~lG~~l~~~L~~l~~~~p~~v~~VRG-rGl~~ai~i~~~~~~~~~aw~~cl-~lk~~g~LAkptH~~IiRfaPPL 407 (427)
T KOG1402|consen 330 VERAAKLGEILRDQLNKLQKKFPHVVKEVRG-RGLLNAIVINPSKTSGQDAWDVCL-ALKENGLLAKPTHGNIIRFAPPL 407 (427)
T ss_pred HHHHHHHHHHHHHHHHhccccccchhheeec-cceEEEEEeccccccchhHHHHHH-cccccccccCCCCCCeEEecCCc
Confidence 6777778888899998876421 1122222 344443321 1 22333 4578899998874 88742
Q ss_pred cCCCCcHHHHHHHHHHHHH
Q 013839 403 GVTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 403 ~~~~e~i~~~~~~l~~~l~ 421 (435)
..+++|+++.++.|.+.+.
T Consensus 408 ~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 408 VISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ccCHHHHHHHHHHHHHHhc
Confidence 3489999999999988763
No 377
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.70 E-value=5.9e-06 Score=77.70 Aligned_cols=302 Identities=12% Similarity=0.051 Sum_probs=173.8
Q ss_pred CCCCCC---CcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHH-HHHHH-hCCC----CEEEEcCCCChh
Q 013839 85 FLESIS---ASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFA-EFQRR-FHPE----SHIYFPDPTWSN 155 (435)
Q Consensus 85 ~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~-~~~~~-~~~g----d~Vlv~~p~y~~ 155 (435)
++-|.| .+|+.++...+.+||....+. +.|. +.-+.|.++-..-+ .+.+- -..| +.++||+..++.
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~----Davs-LQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT 169 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITGM----DAVS-LQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT 169 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceee-ccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCC
Confidence 455666 578889999999998433322 1332 23444544433331 12221 2234 689999998887
Q ss_pred hHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeec
Q 013839 156 HHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDM 235 (435)
Q Consensus 156 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~De 235 (435)
....+.+.|++++.|++ .+++.+|+++|++++. +++.++.+.+||. .| +=.+++.+|+++.+++|..+..|.
T Consensus 170 NPASAam~G~~VV~V~~--~~~G~VDlddLk~k~~---~~~AalMiTnPsT-~G--vFE~~I~ei~~ivH~~Gg~vY~DG 241 (496)
T COG1003 170 NPASAAMAGFKVVVVKC--DENGNVDLDDLRAKAE---DNLAALMITNPST-LG--VFEEDIREICEIVHEAGGQVYYDG 241 (496)
T ss_pred ChhhHhhcCceEEEEec--CCCCCccHHHHHHHhc---cceeEEEeccCcc-cc--cchhhHHHHHHHHHHcCCEEEecC
Confidence 77788899999999998 4567899999999998 7788888866532 34 457889999999999999999999
Q ss_pred cCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc----CCcccEEEEEecChhHHHHHHHHHHH----Hh----
Q 013839 236 AYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY----GHRVGCLSILCVDSKQAAAIRSQIQQ----IA---- 303 (435)
Q Consensus 236 ay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~----G~RvG~~~~~~~~~~~~~~~~~~l~~----~~---- 303 (435)
+-.--..+ +..-.+.+- +++=.-+.|+|..| |-..|=+.+ ... ++..+-. ..
T Consensus 242 ANlNA~vG--------~~rPGd~G~-DV~HlNLHKTF~iPHGGGGPG~GPvgV---k~~----L~pfLP~p~~~~~~~~y 305 (496)
T COG1003 242 ANLNAIVG--------LARPGDMGF-DVVHLNLHKTFCIPHGGGGPGAGPVGV---KAH----LAPFLPGPVVYHDVGEY 305 (496)
T ss_pred cchhhhhc--------ccccccccc-ceEEeecccccccCCCCCCCCCCceeh---Hhh----ccccCCCCcccCCCccc
Confidence 83211111 101112222 33334578887333 444555532 222 2221111 00
Q ss_pred ------------hccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc--Cc
Q 013839 304 ------------RAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITN--QL 369 (435)
Q Consensus 304 ------------~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~ 369 (435)
...+.+...+...+-+.++.-+. +.+++.-+..--+.+++...|+.. ++ +.+.+. ..
T Consensus 306 ~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~------~GL~~ase~AvLNANYia~rL~~~-y~--~~y~~~~~~~ 376 (496)
T COG1003 306 RLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGA------DGLKQASEVAVLNANYIARRLKGY-YP--VPYTGENRVA 376 (496)
T ss_pred cccCCCCccceeeccccCcchHHHHHHHHHHHHhH------HHHHHHHHHHHHhHHHHHHHhhhc-Cc--cccCCCCcce
Confidence 01122222333333333333332 556777777777888999998863 11 111111 11
Q ss_pred ceeEec--------CCCHHHH-HHHhhhccEEEeCC-------C--cEEecc-CCCCcHHHHHHHHHHHHHhhhh
Q 013839 370 GMFCFS--------GLTPYQV-DRLAKEFHIYMTQD-------G--RISMAG-VTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 370 g~~~~~--------~~~~~~~-~~ll~~~gI~i~pg-------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
-=|++- |++.+++ .+|+ .+|+-...- | -|=.+- .+.++++++++++.++.++..+
T Consensus 377 HE~ild~r~l~~~~Gv~~~DvAKrLl-D~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 377 HECILDARPLKKETGVRALDVAKRLL-DYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred eEEEeechHhHhhcCCcHHHHHHHHH-hcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 112211 4555555 5555 588866421 2 222211 2557799999998888776543
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.66 E-value=7.9e-06 Score=77.08 Aligned_cols=190 Identities=14% Similarity=0.021 Sum_probs=120.5
Q ss_pred HHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEE-----EcCCCChhhHHHHhhCCCCeeeeeecC
Q 013839 100 ESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIY-----FPDPTWSNHHNIWRDAQIPERTYHYYD 174 (435)
Q Consensus 100 ~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vl-----v~~p~y~~~~~~~~~~g~~~~~v~~~~ 174 (435)
.+++.+.+.... +..+ +++..+.|+.++ +.++..++..|+ ++ ++.+...++++..|++++.+-..+
T Consensus 72 ~~~~~~~~~~~a----ea~~--ivnnn~aAVll~--~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~tn 142 (395)
T COG1921 72 ELAELLCGLTGA----EAAA--IVNNNAAAVLLT--LNALAEGKEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTTN 142 (395)
T ss_pred HHHHHHhcccch----hhee--eECCcHHHHHHH--HhhhccCCeEEEEcccccc-CCCCChhHHHHHcCCEEEEecccC
Confidence 555555444322 2333 788888888777 555544334443 33 566788899999999999986422
Q ss_pred CCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC-CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHH
Q 013839 175 PDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN-PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIR 253 (435)
Q Consensus 175 ~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N-PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 253 (435)
.-...+++.++. .++++++-.+-+| +.--.++ .++++++|++|++++|+|.+-...... .+.++
T Consensus 143 ----~t~~~d~~~AIn---e~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~-----e~~l~ 207 (395)
T COG1921 143 ----RTHLKDYELAIN---ENTALLLKVHSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDK-----EPDLR 207 (395)
T ss_pred ----cCCHHHHHHHhc---cCCeeEEEEeecccccccccc---HHHHHHHHHHcCCCEEEecCCcccccc-----ccchh
Confidence 357788999998 5666555444333 2222334 447899999999999999994333221 12333
Q ss_pred HhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhC
Q 013839 254 IFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILS 323 (435)
Q Consensus 254 ~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 323 (435)
.+... .-.+++.|--|.+| |.+-|.+++ .++ ++.++++..-....-.......++.++|+
T Consensus 208 ~~la~-GaDLV~~SgdKllg--GPqaGii~G---kKe----lI~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 208 EALAL-GADLVSFSGDKLLG--GPQAGIIVG---KKE----LIEKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred HHHhc-CCCEEEEecchhcC--CCccceEec---hHH----HHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 33332 35788899999986 777888865 888 77777765433334444455555555554
No 379
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.65 E-value=3.5e-06 Score=75.31 Aligned_cols=168 Identities=15% Similarity=0.171 Sum_probs=115.3
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcC-CCChhhHHH----------H
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPD-PTWSNHHNI----------W 160 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~-p~y~~~~~~----------~ 160 (435)
-|...|-...|+-+ +.. ..++-....+||.|+..+ +..+++|||+.+... --|....++ +
T Consensus 65 ~GRdtLe~vyA~vf-~aE------~a~VRpq~isGTHAI~~a--Lfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL 135 (416)
T COG4100 65 LGRDTLERVYAQVF-GAE------AALVRPQIISGTHAIACA--LFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSL 135 (416)
T ss_pred cchhHHHHHHHHHh-ccc------cceeeeeeecchhHHHHH--HHhccCCCCeEEEecCCcchhHHHHhccCCCCcccH
Confidence 45556655555554 442 234444677999999888 899999999987544 234444433 3
Q ss_pred hhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCC----CCCHHHHHHHHHHHHh--cCceeeee
Q 013839 161 RDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGV----DPTEEQWREISYQFKV--KGHFPFFD 234 (435)
Q Consensus 161 ~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~----~~~~~~l~~i~~~~~~--~~~~vi~D 234 (435)
...|+....+|+ ..++.+|++.+++.+. ++++++.+- -.+|. .++.+++++++++.|+ -++++++|
T Consensus 136 ~dfgi~Y~~v~L--t~~gkiD~~~v~~~i~---~~tkli~IQ---RS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVD 207 (416)
T COG4100 136 KDFGIKYKAVPL--TADGKIDIQAVKTAIS---DRTKLIGIQ---RSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVD 207 (416)
T ss_pred HHhCcceeeccc--ccCCcccHHHHHHhcC---ccceEEEEE---eccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEe
Confidence 456777777887 4457899999999998 788988873 33443 3678899999999997 37999999
Q ss_pred ccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCc--ccEEEEEecChh
Q 013839 235 MAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHR--VGCLSILCVDSK 290 (435)
Q Consensus 235 eay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~R--vG~~~~~~~~~~ 290 (435)
.+|.+|.... + +..+ .-++..+|+-|.-| .|+- -||+.+ ..+
T Consensus 208 NCYGEFvE~~-E--Pt~v-------GaDliAGSLIKNpG-GgiaktGGYiaG---k~~ 251 (416)
T COG4100 208 NCYGEFVEEK-E--PTHV-------GADLIAGSLIKNPG-GGIAKTGGYIAG---KAE 251 (416)
T ss_pred ccchhhhhcc-C--cccc-------chhhhccceeeCCC-Cceeeccceeec---hHH
Confidence 9999998652 1 1111 23567889999865 3332 267743 666
No 380
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.64 E-value=6.1e-05 Score=76.69 Aligned_cols=169 Identities=13% Similarity=0.061 Sum_probs=108.9
Q ss_pred cccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhC-----
Q 013839 67 PVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFH----- 141 (435)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~----- 141 (435)
+.++..+......+.+.....|..+.+...+-+.+.+++...-+.+ +. .+++|+|||.|+..++...+-..
T Consensus 94 ~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~--~~--~G~~TsGGT~ANl~aL~~AR~~k~~p~a 169 (608)
T TIGR03811 94 TLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYK--NG--WGHIVADGSLANLEGLWYARNIKSLPFA 169 (608)
T ss_pred CCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCC--CC--CeEEeCChHHHHHHHHHHHHHhhhccch
Confidence 4455555555555555445555555566677777777763221111 11 25679999999877643222110
Q ss_pred ---------------------------------------------CCC------EEEEcCCCChhhHHHHhhCCC---Ce
Q 013839 142 ---------------------------------------------PES------HIYFPDPTWSNHHNIWRDAQI---PE 167 (435)
Q Consensus 142 ---------------------------------------------~gd------~Vlv~~p~y~~~~~~~~~~g~---~~ 167 (435)
+|. +++++.-.+..+...+...|+ .+
T Consensus 170 ~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~v 249 (608)
T TIGR03811 170 MKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQV 249 (608)
T ss_pred hhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccE
Confidence 000 577777778788888888888 58
Q ss_pred eeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCc--eeeeeccCCCcc
Q 013839 168 RTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGH--FPFFDMAYQGFA 241 (435)
Q Consensus 168 ~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~--~vi~Deay~~~~ 241 (435)
+.||+ ++++.+|++.|++.+.+. ...+.+||-+.....+|.+=+.+++.+|++.++++|+ |+.+|.||.++.
T Consensus 250 v~Vpv--D~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 250 IPVPV--DSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred EEeec--CCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchh
Confidence 88888 346799999999998642 2234566667788888887555544444444477887 699999998853
No 381
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.50 E-value=9.7e-06 Score=76.43 Aligned_cols=280 Identities=15% Similarity=0.091 Sum_probs=145.1
Q ss_pred ecCCchhHHHHHHHHHHHh--CCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCC-CCCCcChHhHHHHhhcCCCCcEE
Q 013839 122 QALSGTGACRLFAEFQRRF--HPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDP-DSKSLDFAALMDDIKNAPDSSFF 198 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~i~~~~~~~~~ 198 (435)
+++.+|+ +.+++.++++- ..++.|+.+.-....-...+..+|.+++.||...+ +....|.+.+++.+++..+...+
T Consensus 79 ~vP~atg-m~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iL 157 (389)
T PF05889_consen 79 VVPMATG-MSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNIL 157 (389)
T ss_dssp EESS-HH-HHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEE
T ss_pred EEecccc-cHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeE
Confidence 4555554 33333344442 35688888876544444566788999999875423 33455778888888764445555
Q ss_pred EEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCC
Q 013839 199 LLHPSAHNPTGVDPTEE-QWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGH 277 (435)
Q Consensus 199 v~~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~ 277 (435)
.+++ .+++...... ++++|.++|++||++.|+..||.-=.. .--..+......+.-..++.|.-|.|-.| .
T Consensus 158 cvlt---ttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~----~~~~~i~~a~~~GRvda~vqS~dkNF~VP-v 229 (389)
T PF05889_consen 158 CVLT---TTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS----KCMHLIQQAWRVGRVDAFVQSTDKNFMVP-V 229 (389)
T ss_dssp EEEE---ESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H----HHHHHHHHHHHHSTCSEEEEEHHHHHCEE-S
T ss_pred EEEE---ecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH----HHHHHHHHHHhcCCcceeeeecCCCEEec-C
Confidence 5553 3344444333 499999999999999999999842110 01112222333456678899999998533 2
Q ss_pred cccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013839 278 RVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLG 357 (435)
Q Consensus 278 RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 357 (435)
. |-++ .+.++. .+..+.+..-.-.+..|. ......+|.-+. ..|..-+.+..+.+....+.+.+.-++.+
T Consensus 230 G-gai~-As~~~~----~i~~vs~~YpGRas~sp~--ld~~itLl~LG~--~g~~~ll~~r~~~f~~l~erl~~~aee~~ 299 (389)
T PF05889_consen 230 G-GAIM-ASFDPS----GILAVSKEYPGRASASPS--LDLFITLLSLGC--TGYGALLKERKASFPYLKERLKKWAEEVG 299 (389)
T ss_dssp S-HEEE-EESSHH----HHHHHHHTSHSHBTSHHH--HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred C-CcEE-EecCHH----HHHHHHHHhhhhhhcccc--hHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2 3333 365777 666666543222222222 223333333221 11334445555555555555554444444
Q ss_pred CCCCccccccCcceeEec-CC---C---HHHHHHHhhhccEEE----eCCC-------------cE---EeccCCCCcHH
Q 013839 358 SSLNWEHITNQLGMFCFS-GL---T---PYQVDRLAKEFHIYM----TQDG-------------RI---SMAGVTTGNVN 410 (435)
Q Consensus 358 ~~~~~~~~~~~~g~~~~~-~~---~---~~~~~~ll~~~gI~i----~pgg-------------Ri---s~~~~~~e~i~ 410 (435)
-. -.+.......+.+-+ .+ . ..++-.+|...||.= .|++ -| |..+++.||++
T Consensus 300 e~-ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd 378 (389)
T PF05889_consen 300 ER-LLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVD 378 (389)
T ss_dssp EE-BSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHH
T ss_pred hh-hcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHH
Confidence 10 011222333333333 22 1 246655666676643 3332 22 22356899999
Q ss_pred HHHHHHHHHHH
Q 013839 411 YLANAIHEVTR 421 (435)
Q Consensus 411 ~~~~~l~~~l~ 421 (435)
.++++|+++++
T Consensus 379 ~~v~rL~k~i~ 389 (389)
T PF05889_consen 379 YFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99999999875
No 382
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.34 E-value=7.5e-07 Score=83.17 Aligned_cols=213 Identities=11% Similarity=0.064 Sum_probs=52.4
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCC------hhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCC
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTW------SNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDS 195 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y------~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 195 (435)
++++...|+.++ +.+ +.+|.+|++..-.- +...++++..|++++.|-..+ .-.+++.++++. ++
T Consensus 67 VvNnnaAAv~L~--l~~-la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~---e~ 136 (367)
T PF03841_consen 67 VVNNNAAAVLLA--LNT-LAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAIT---EN 136 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccc--ccc-ccccccccccccccccccccccccccccccccccccccccc----cccccccccccc---cc
Confidence 577777777666 333 34677777655221 224567788999999886532 346788999998 78
Q ss_pred cEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeeeeccCC---CccCCCCcccHHHHHHhhhcCCeEEEEecccc
Q 013839 196 SFFLLHPSAHNPT--GVDPTEEQWREISYQFKVKGHFPFFDMAYQ---GFASGDLDKDAQAIRIFLEDEHLIGCAQSYAK 270 (435)
Q Consensus 196 ~~~v~~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~vi~Deay~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK 270 (435)
|.+++-.+++|-. |..-.+ .++++++++++|++++|+|-.-. ++...++ ++.+.+..+.. ..-+++++|-.|
T Consensus 137 Ta~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl-~~Ep~v~~~~~-~GaDlV~fSGdK 213 (367)
T PF03841_consen 137 TAALLKVHTSNFRIQGFTGEV-SLEELAELAKEHGLPVIVDLGSGLLVDLSPYGL-PDEPTVQEYLA-AGADLVTFSGDK 213 (367)
T ss_dssp -------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCC-CT-SEEEEETTS
T ss_pred ccccccccccccccccccccc-cHHHHHHHHhhcCCcEEEECCCCCCcCcccccC-ccccHHHHHhh-cCCCEEEEECCC
Confidence 8888888877764 333222 57899999999999999998731 1111111 11234444433 245788899999
Q ss_pred cccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChh----hHHH--HHHHHHHHHHHHHH
Q 013839 271 SMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPN----LKSL--WIDEVKIMADRIQR 344 (435)
Q Consensus 271 ~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~----l~~~--~~~~~~~~~~~~~~ 344 (435)
.+| |...|.+++ .++ +++++++..-.-..-.......++.+.|.... ..++ ....+....+.+++
T Consensus 214 lLG--GPQaGiI~G---kk~----lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~ 284 (367)
T PF03841_consen 214 LLG--GPQAGIIVG---KKE----LIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRA 284 (367)
T ss_dssp SSS--S-S-EEEEE---EHH----HHHHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------
T ss_pred cCC--CCCeEEEEe---CHH----HHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccc
Confidence 997 455788865 888 88888876544455566666656555553211 0000 01223344455555
Q ss_pred HHHHHHHHHHhh
Q 013839 345 KRTTLRQNLEKL 356 (435)
Q Consensus 345 ~~~~l~~~l~~~ 356 (435)
+.+.+.+.|+..
T Consensus 285 rA~~l~~~l~~~ 296 (367)
T PF03841_consen 285 RAERLAAQLKAA 296 (367)
T ss_dssp ------------
T ss_pred cccccccccccc
Confidence 566666555443
No 383
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.23 E-value=0.00022 Score=66.22 Aligned_cols=262 Identities=14% Similarity=0.133 Sum_probs=135.4
Q ss_pred CCeeeEecCCc-hhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH-HHhhCCC--CeeeeeecCCCC--CCcChHhHHHHh
Q 013839 116 GRSAGVQALSG-TGACRLFAEFQRRFHPESHIYFPDPTWSNHHN-IWRDAQI--PERTYHYYDPDS--KSLDFAALMDDI 189 (435)
Q Consensus 116 ~~v~~~~t~gg-~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~-~~~~~g~--~~~~v~~~~~~~--~~~d~e~l~~~i 189 (435)
++.-..+..|| ++.+..+ .+.++.+..+-.+....|..... -++.++- ++..... .+.+ .-++++... +
T Consensus 67 d~Y~VlflqGGat~qf~~~--p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~-~~~~~~~iP~~~~~~--~ 141 (365)
T COG1932 67 DDYKVLFLQGGATGQFAMA--PMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARI-EEAGYGSIPDLSKWD--F 141 (365)
T ss_pred CCceEEEEcCccHHHHHHH--HHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccce-eccCccCCCChhhcc--c
Confidence 33333366666 5555555 66666544331444555544422 2334442 2222222 1222 223333322 2
Q ss_pred hcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccc
Q 013839 190 KNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYA 269 (435)
Q Consensus 190 ~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S 269 (435)
. ++...+.++.-+.-+|+-++.. .. +.. +.++|.|..-.-+... . +-..-.++-.|.-
T Consensus 142 ~---~~~ayv~~~~NeTi~Gv~v~~~--p~---~~~--~~~~v~D~SS~ilsr~-i-----------Dvsk~dviyagaQ 199 (365)
T COG1932 142 S---DNDAYVHFCWNETISGVEVPEL--PD---IGS--DGLLVADASSAILSRP-I-----------DVSKYDVIYAGAQ 199 (365)
T ss_pred C---CCccEEEEecCCcccceEccCC--CC---CCC--CceEEEecccHHhcCC-C-----------ChhHcceEEEehh
Confidence 2 2233344443333446655421 11 111 2778888873323211 1 2223456678899
Q ss_pred ccccccCCcccEEEEEecChhHHHHHHHHHHHH-------------hhccccCCChhHHHHHHHHhCChhhHHHHH---H
Q 013839 270 KSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI-------------ARAMYGSPPVHGILLVATILSDPNLKSLWI---D 333 (435)
Q Consensus 270 K~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~---~ 333 (435)
|.+|..| ++.+++ .++ ++.+.... ...++.+||.++.+.....++ |. -
T Consensus 200 KnlGpaG--ltvvIv---r~~----~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~-------Wlk~~G 263 (365)
T COG1932 200 KNLGPAG--LTVVIV---RPD----LLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFK-------WLKSQG 263 (365)
T ss_pred hccCccc--eEEEEE---cHH----HHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHH-------HHHHcC
Confidence 9999888 555654 777 44444332 124456677766665544432 11 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEecC-----CCHHHHHHHhhhccEEEeCC-----C-cEEec
Q 013839 334 EVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFSG-----LTPYQVDRLAKEFHIYMTQD-----G-RISMA 402 (435)
Q Consensus 334 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~ll~~~gI~i~pg-----g-Ris~~ 402 (435)
.++.+.++.+++.+.|++.+...+............-+.+.+. ++..++..+ +++|+..-.| | |+|+.
T Consensus 264 Gl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~ea-e~~gl~~lkGhr~vgGmRasiy 342 (365)
T COG1932 264 GLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDAELDKGFVAEA-EAAGLIYLKGHRSVGGLRASIY 342 (365)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCcHHHHHHHHHHH-HHcCCceeccccCCCceeeeee
Confidence 3678888999999999999987754211111112222333332 345566655 4567776544 4 99986
Q ss_pred c-CCCCcHHHHHHHHHHHHH
Q 013839 403 G-VTTGNVNYLANAIHEVTR 421 (435)
Q Consensus 403 ~-~~~e~i~~~~~~l~~~l~ 421 (435)
+ ++.|+++.+++-++.+.+
T Consensus 343 nA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 343 NAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred cCCCHHHHHHHHHHHHHHHH
Confidence 5 367788777777766654
No 384
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.19 E-value=0.00054 Score=72.65 Aligned_cols=245 Identities=13% Similarity=0.099 Sum_probs=134.3
Q ss_pred ecCCchhHHHHHHHHHHH-hC--CCCEEEEcCCCChhhHHHHh----hCCCCeeeeeecCCCCCCcChHhHHHHhhcCCC
Q 013839 122 QALSGTGACRLFAEFQRR-FH--PESHIYFPDPTWSNHHNIWR----DAQIPERTYHYYDPDSKSLDFAALMDDIKNAPD 194 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~-~~--~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~ 194 (435)
+..+++.+-+++ +++. .. ++++|++++-.++.+..+++ ..|.+++.++ +++|++.+
T Consensus 131 l~d~atA~aEa~--~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~----- 193 (939)
T TIGR00461 131 LLDEGTAAAEAM--ALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV----- 193 (939)
T ss_pred ccchhhHHHHHH--HHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC-----
Confidence 567777777766 3332 22 34899999988888776555 6677776653 34454443
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccc
Q 013839 195 SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGL 274 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~ 274 (435)
++.++++.+|+ -+|.+ +++++|.+.++++|.+++++.--..+.. + .. +....-+|++++ +|.||.
T Consensus 194 ~~~~v~~q~Pn-~~G~i---ed~~~i~~~~h~~gal~~~~ad~~al~l--l-~~-------Pge~GaDi~vg~-~q~fg~ 258 (939)
T TIGR00461 194 DVFGCLLQYPA-TDGSI---LDYKQLIDALHSHKSLVSVAADLMALTL--L-TP-------PGHYGADIVLGS-SQRFGV 258 (939)
T ss_pred CEEEEEEECCC-CCeEE---ecHHHHHHHHHHcCCEEEEEechHHhCC--c-CC-------HHHcCCcEEeeC-CCccCC
Confidence 35677776664 46765 4788999999999999998543221211 1 11 111233444443 333332
Q ss_pred ----cCCcccEEEEEecChhHHHHHHHHHH------------------------HHhh--ccccCCCh--hHHH-HHHHH
Q 013839 275 ----YGHRVGCLSILCVDSKQAAAIRSQIQ------------------------QIAR--AMYGSPPV--HGIL-LVATI 321 (435)
Q Consensus 275 ----~G~RvG~~~~~~~~~~~~~~~~~~l~------------------------~~~~--~~~~~~~~--~~q~-~~~~~ 321 (435)
.|.-.|++.+ .++ +...+- ++.+ ..+++..+ .... ++...
T Consensus 259 p~g~GGP~aG~~a~---~~~----l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y 331 (939)
T TIGR00461 259 PMGYGGPHAAFFAV---KDE----YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSY 331 (939)
T ss_pred CCCCCCCceeeeee---cHh----hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHH
Confidence 3444666642 444 222110 0011 11111111 1111 11111
Q ss_pred hC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEec--C---CCHHHHHHHhhhccEEEeC
Q 013839 322 LS-DPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS--G---LTPYQVDRLAKEFHIYMTQ 395 (435)
Q Consensus 322 l~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~--~---~~~~~~~~ll~~~gI~i~p 395 (435)
+. .+ .+.++++.++...+..++.+.|++.|. +...+ .+|--+ . .+.+.+.+.+.++||.+..
T Consensus 332 ~~~~G------~~GL~~iA~~~~~~a~~l~~~L~~~G~----~~~~~--~fF~~~~v~~~~~~~~~i~~~~~~~gi~l~~ 399 (939)
T TIGR00461 332 CVYHG------PKGLKNIARRIHSLTSILANGLENDPH----ELINK--TWFDTLTVKVGNGISSELLKAAEEFNINLRA 399 (939)
T ss_pred HHHHC------HHHHHHHHHHHHHHHHHHHHHHHhCCC----cccCC--CccceEEEEeCCCCHHHHHHHHHHCCCeeee
Confidence 11 11 156788888888899999999998874 33322 233211 2 2445554444668999875
Q ss_pred CC----cEEeccC-CCCcHHHHHHHHH
Q 013839 396 DG----RISMAGV-TTGNVNYLANAIH 417 (435)
Q Consensus 396 gg----Ris~~~~-~~e~i~~~~~~l~ 417 (435)
.. ++|+.-. +.++++.+++.+.
T Consensus 400 ~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 400 VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 42 6666432 6788888888884
No 385
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.08 E-value=0.00057 Score=66.21 Aligned_cols=195 Identities=16% Similarity=0.145 Sum_probs=104.7
Q ss_pred ecCCchhHHHHHHHHHHHhC-CCCEEEEcCCCChhhHHHHh----hCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCc
Q 013839 122 QALSGTGACRLFAEFQRRFH-PESHIYFPDPTWSNHHNIWR----DAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~-~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
+-.+++.+-+.+....+.-. ..++|+++.-.++.+..+++ ..|++++.++.. + +...| . +++
T Consensus 132 lyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~-~-~~~~d--------~---~~~ 198 (429)
T PF02347_consen 132 LYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLD-E-DGTTD--------D---DDT 198 (429)
T ss_dssp BSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BB-T-TCSB---------S---TTE
T ss_pred CCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEeccc-c-cCCcc--------c---cCe
Confidence 45677766666632222322 23699999999988887554 578888888773 2 22333 2 678
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccccccc-
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLY- 275 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~- 275 (435)
.++++.+||+ .|.+ +++++|.++++++|.++++ .+ .......+. + +....-+|++++ +|.||.|
T Consensus 199 a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~a-d~~aL~~l~----~----Pge~GADI~vg~-~Q~fg~p~ 263 (429)
T PF02347_consen 199 AAVMVQNPNT-FGVF---EDIKEIADIAHAAGALVIV-GA-DPNALGGLK----S----PGEYGADIVVGE-HQTFGIPM 263 (429)
T ss_dssp EEEEEESS-T-TSB-----THHHHHHHHHHTT-EEEE-CG-GCCGCCTC----------GGGGT-SEEEEC-CTTTT---
T ss_pred EEEEeecCCC-CceE---eeHHHHHHHHHHcCCEEEE-ec-CHHHHhCcC----C----hhhcCccEEeeC-CCCCcccC
Confidence 9999977753 5654 4588999999999998887 44 333333211 1 122233555665 7776543
Q ss_pred ---CCcccEEEEEecChhHHHHHHHHH----------------------------HHHhhccccCCC-hhHHHHHHHHhC
Q 013839 276 ---GHRVGCLSILCVDSKQAAAIRSQI----------------------------QQIARAMYGSPP-VHGILLVATILS 323 (435)
Q Consensus 276 ---G~RvG~~~~~~~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~-~~~q~~~~~~l~ 323 (435)
|-..|++.+ .++ +...+ ++-+-....+.+ .+...++...+.
T Consensus 264 ~~GGP~~G~~a~---~~~----l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~ 336 (429)
T PF02347_consen 264 GFGGPGAGFFAV---RED----LVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLA 336 (429)
T ss_dssp CCC-S--EEEEE----GG----GGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHH
T ss_pred CCCCCCeeeEEE---hhh----hhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHH
Confidence 555677743 444 32222 111111222222 222222223332
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013839 324 DPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL 356 (435)
Q Consensus 324 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 356 (435)
.-+ .+.+++..++...+..++.+.|++.
T Consensus 337 ~~G-----~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 337 YLG-----PEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHH-----HHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred HhC-----HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 2778899999999999999999886
No 386
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.98 E-value=0.011 Score=56.19 Aligned_cols=260 Identities=16% Similarity=0.155 Sum_probs=138.7
Q ss_pred ecCCchhHHHHHHHHHHHhC-CCCEEEEcCCCChhhHHHHhh----CCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCc
Q 013839 122 QALSGTGACRLFAEFQRRFH-PESHIYFPDPTWSNHHNIWRD----AQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~-~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
.--++|.+-+.+.....+-. +.++++|+.-.|+.+.++++. .|.+++.++. + |.+++++. .. ..+
T Consensus 142 m~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~---~----d~~~l~~~-~~--~~~ 211 (450)
T COG0403 142 MLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA---D----DLDDLESA-DD--GDV 211 (450)
T ss_pred hhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEecc---c----hhhhhhhc-cc--cCe
Confidence 45677777666632333322 248999999999999888773 4455555543 1 67777777 31 466
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEeccccc---cc
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKS---MG 273 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~---~g 273 (435)
..+++ ++|...-....++++|.+.+++++.++++=.= .+. ..+..-++...-+|++++.... +|
T Consensus 212 ~gv~v---QyP~~~G~~~~d~~~l~~~~h~~~al~~v~aD--pla--------L~LL~pPGe~GADIvvG~~QrfGvPmg 278 (450)
T COG0403 212 FGVLV---QYPNTFGIVEEDLRALIEAAHSAGALVIVAAD--PLA--------LGLLKPPGEFGADIVVGSAQRFGVPMG 278 (450)
T ss_pred EEEEE---ecCCCCCccchhHHHHHHHHhhcCCEEEEEec--hhH--------hhccCCccccCCceEEecCcccCCCcC
Confidence 77777 45554434567899999999999987765210 111 1111123334567777765543 56
Q ss_pred ccCCcccEEEEEecChhHHHHH-----------------------H-HHHHHHhhccccCCChhH-HHHHHH--HhCChh
Q 013839 274 LYGHRVGCLSILCVDSKQAAAI-----------------------R-SQIQQIARAMYGSPPVHG-ILLVAT--ILSDPN 326 (435)
Q Consensus 274 ~~G~RvG~~~~~~~~~~~~~~~-----------------------~-~~l~~~~~~~~~~~~~~~-q~~~~~--~l~~~~ 326 (435)
+.|-.+||..+ .++...++ . +.+++-+-.+..+.+... ..+++. .+..+
T Consensus 279 fGGPhag~fA~---~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp- 354 (450)
T COG0403 279 FGGPHAGYFAV---KDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGP- 354 (450)
T ss_pred CCCcceeeeeE---hHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhCh-
Confidence 66777888743 44421110 0 111111111112222111 111111 12222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEec--CCCHHHHHHHh---hhccEEEeCC--CcE
Q 013839 327 LKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS--GLTPYQVDRLA---KEFHIYMTQD--GRI 399 (435)
Q Consensus 327 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~ll---~~~gI~i~pg--gRi 399 (435)
+.++++.++..+...++.+.|++.+. ++..... .||--+ .+..+....++ ...|+-++.- .++
T Consensus 355 ------~GLk~iA~r~~~~a~~la~~L~~~~~--g~~~~~~--~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~~~~ 424 (450)
T COG0403 355 ------QGLKEIAERIHRLAAYLAAGLKEIGA--GVELVFD--HFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDADTV 424 (450)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHhhcCC--ceEeccc--cceeeEEEecchhHHHHHHHHHHhcCCceeeecCCce
Confidence 67888999999999999999996542 1233222 334322 33322222222 2356666543 255
Q ss_pred Eecc---CCCCcHHHHHHHHHH
Q 013839 400 SMAG---VTTGNVNYLANAIHE 418 (435)
Q Consensus 400 s~~~---~~~e~i~~~~~~l~~ 418 (435)
.++. .+.++++.+++.+..
T Consensus 425 ~ia~tEt~t~~~i~~l~~~~~~ 446 (450)
T COG0403 425 LIALTETTTKEDIDALVAAFGG 446 (450)
T ss_pred EEEeecccCHHHHHHHHHHHhh
Confidence 5543 134556555555543
No 387
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.97 E-value=0.0012 Score=62.30 Aligned_cols=151 Identities=15% Similarity=0.029 Sum_probs=88.2
Q ss_pred ecCCchhHHHHHHHHHHH-hCCC----------CEEEEcC-CCChhhHHHHhhCC---CCeeeeeecCCCCCCcChHhHH
Q 013839 122 QALSGTGACRLFAEFQRR-FHPE----------SHIYFPD-PTWSNHHNIWRDAQ---IPERTYHYYDPDSKSLDFAALM 186 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~-~~~g----------d~Vlv~~-p~y~~~~~~~~~~g---~~~~~v~~~~~~~~~~d~e~l~ 186 (435)
+.+||+-++..+..+..- .-|+ +-|+..+ -++......+..+| -..+.|++ .+.+.+++++|+
T Consensus 164 f~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe 241 (510)
T KOG0629|consen 164 FAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKT--DERGKMIPDDLE 241 (510)
T ss_pred ecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecc--cccCccchHHHH
Confidence 488887665544311111 1133 3344433 45555666777777 35677776 445789999999
Q ss_pred HHhhcCCCC---cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEE
Q 013839 187 DDIKNAPDS---SFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIG 263 (435)
Q Consensus 187 ~~i~~~~~~---~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (435)
+.|.+...+ +.++-.+.. |-+..--+++..|+++|++|++|+-+|.+|.+-..-. ..... .+.....--=
T Consensus 242 ~kile~k~kg~~Pf~vnaTaG---TTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS--~k~R~--kl~Giera~S 314 (510)
T KOG0629|consen 242 KKILEAKAKGGVPFFVNATAG---TTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMS--RKHRH--KLTGIERANS 314 (510)
T ss_pred HHHHHHHhcCCCCeEEEecCC---ceeeeccCcHHHHHHHHHhcCEEEEeecccccccccC--hhhHh--hccCccccCc
Confidence 998765322 333333222 3233345788899999999999999999986632211 11111 1222222224
Q ss_pred EEecccccccccCCcccEE
Q 013839 264 CAQSYAKSMGLYGHRVGCL 282 (435)
Q Consensus 264 ~~~s~SK~~g~~G~RvG~~ 282 (435)
+..+..|.+| ..+.++..
T Consensus 315 vtwnpHK~~g-aplqCsa~ 332 (510)
T KOG0629|consen 315 VTWNPHKLMG-APLQCSAF 332 (510)
T ss_pred eeecHHHhhc-CcchhhHH
Confidence 5567788888 55666554
No 388
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.65 E-value=0.0017 Score=59.90 Aligned_cols=215 Identities=12% Similarity=0.113 Sum_probs=116.7
Q ss_pred ChHhHHHHhhcCC---CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhh
Q 013839 181 DFAALMDDIKNAP---DSSFFLLHPSAHNPTGVDP-TEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFL 256 (435)
Q Consensus 181 d~e~l~~~i~~~~---~~~~~v~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~ 256 (435)
+++++++.|.+.. ....++++..-+...|... +++-.+.|.+++++|++.+|+||+..+.+-.+ +.|.-..+.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG---k~WaHehw~ 330 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG---KFWAHEHWN 330 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC---ceeeehhcC
Confidence 4566777766542 3456777766677777654 88889999999999999999999976665543 233322221
Q ss_pred hcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHHHHHHhCChhhHHHHHHHHH
Q 013839 257 EDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILLVATILSDPNLKSLWIDEVK 336 (435)
Q Consensus 257 ~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~ 336 (435)
-....+ +-+|||-|- .| ||.. +++ ++..-.-.+...|.+-|.-. ..+..++..- ..+
T Consensus 331 l~~PpD--~vTFSKK~q-~g---Gffh----~~~----frpn~pYrifNTWmGdP~k~-lll~~vv~~I--------~~~ 387 (484)
T KOG1405|consen 331 LDSPPD--VVTFSKKFQ-TG---GFFH----DEE----FRPNEPYRIFNTWMGDPSKN-LLLEEVVQEI--------KRE 387 (484)
T ss_pred CCCCcc--ceehhhhhh-cC---cccc----Ccc----cCCCchHHHhhhhcCChHHH-HHHHHHHHHH--------hHH
Confidence 111112 336898886 44 5553 554 44321111122333333221 1111222110 012
Q ss_pred HHHHHHHHHHHHHHHHHHhh--CCCCCccccccCcceeEecCC-C---HHHHHHHhhhccEEEeCCC----cEEecc-CC
Q 013839 337 IMADRIQRKRTTLRQNLEKL--GSSLNWEHITNQLGMFCFSGL-T---PYQVDRLAKEFHIYMTQDG----RISMAG-VT 405 (435)
Q Consensus 337 ~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~ll~~~gI~i~pgg----Ris~~~-~~ 405 (435)
...+.....-+.|...|.++ ..|..+.-.+..|.|..| ++ + .+.+...++-.|+-+-.+| |+..+- ..
T Consensus 388 ~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~-d~ps~~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~ 466 (484)
T KOG1405|consen 388 DLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAW-DCPSGSIRDKLILIARLNGVNLGGCGDKSIRFRPSLVFR 466 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEE-eCCChHHHHHHHHHHHHcCceecccccceeeeccceeeh
Confidence 23334444555666666544 233345555565554444 43 2 2344445566899987666 664321 15
Q ss_pred CCcHHHHHHHHHHHHHh
Q 013839 406 TGNVNYLANAIHEVTRS 422 (435)
Q Consensus 406 ~e~i~~~~~~l~~~l~~ 422 (435)
+.-.+-+++++.+++..
T Consensus 467 ~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 467 KHHADIFLDIFDKILAG 483 (484)
T ss_pred hhhHHHHHHHHHHHhcc
Confidence 55567788888887753
No 389
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.49 E-value=0.0094 Score=57.11 Aligned_cols=93 Identities=19% Similarity=0.162 Sum_probs=66.5
Q ss_pred EEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 013839 146 IYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA---PDSSFFLLHPSAHNPTGVDPTEEQWREISY 222 (435)
Q Consensus 146 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~ 222 (435)
+...+-+...........|.+...++. |+ +++++.+.|.+++.++ +-.+.+++.+ . --||. -..+++++|..
T Consensus 185 ~Y~SDqahssveka~~i~~VklR~l~t-d~-n~~mr~~~L~~AIe~D~arGlIPf~v~at-~-GTT~~-ca~D~l~elg~ 259 (511)
T KOG0628|consen 185 AYCSDQAHSSVEKACLIAGVKLRALPT-DE-NFGMRGDTLRKAIEEDIARGLIPFFVCAT-L-GTTSS-CAFDELEELGP 259 (511)
T ss_pred EEecCcccchHHHhHhhcceeEEEeec-cc-CcCCCHHHHHHHHHHHHhCCCccEEEEEe-e-cCccc-cccccHHHhcc
Confidence 345556666777777777888888887 34 8999999999999864 1223333332 1 12222 24578999999
Q ss_pred HHHhcCceeeeeccCCCccCC
Q 013839 223 QFKVKGHFPFFDMAYQGFASG 243 (435)
Q Consensus 223 ~~~~~~~~vi~Deay~~~~~~ 243 (435)
+|+++|+|+-+|.+|++-.+.
T Consensus 260 Vc~~~glWLHVDAAYAGsa~i 280 (511)
T KOG0628|consen 260 VCREEGLWLHVDAAYAGSAFI 280 (511)
T ss_pred hhhhcCEEEEeehhhcccccc
Confidence 999999999999999876654
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.25 E-value=0.15 Score=54.53 Aligned_cols=251 Identities=14% Similarity=0.089 Sum_probs=128.3
Q ss_pred ecCCchhHHHHHHHHHHHhC-CCCEEEEcCCCChhhHHHHh----hCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCc
Q 013839 122 QALSGTGACRLFAEFQRRFH-PESHIYFPDPTWSNHHNIWR----DAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~-~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
+-.+++.+-+.+.......+ ...+|+|++-.++.+..+++ ..|++++. +++++.+. .++
T Consensus 146 l~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~---~~~ 209 (954)
T PRK12566 146 LLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAA---HAV 209 (954)
T ss_pred hccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCC---CCE
Confidence 34566665554421122211 14689999999988887766 33434332 33444443 457
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEe---ccccccc
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQ---SYAKSMG 273 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---s~SK~~g 273 (435)
..+++.+|+ -.|.+ +++++|.+.++++|.++| +.+ ..+... +..-++...-+|+++ +|+=-+|
T Consensus 210 ~~v~vq~P~-~~G~i---~d~~~i~~~~h~~gal~~-~~~-d~laL~--------ll~~Pge~GADI~vG~~Q~fGvp~~ 275 (954)
T PRK12566 210 FGALLQYPD-THGEI---RDLRPLIDQLHGQQALAC-VAA-DLLSLL--------VLTPPGELGADVVLGSTQRFGVPMG 275 (954)
T ss_pred EEEEEECCC-CceEE---ccHHHHHHHHHHcCCEEE-EEe-CHHHHh--------CCCChhhcCCcEEeeCCCcCCCCCC
Confidence 788776664 35665 678899999999998865 333 112211 111122334456565 3444455
Q ss_pred ccCCcccEEEEEecChhHHHHH-----------------------H-HHHHHHhhccccCCChhH-HHHHHHHhC-Chhh
Q 013839 274 LYGHRVGCLSILCVDSKQAAAI-----------------------R-SQIQQIARAMYGSPPVHG-ILLVATILS-DPNL 327 (435)
Q Consensus 274 ~~G~RvG~~~~~~~~~~~~~~~-----------------------~-~~l~~~~~~~~~~~~~~~-q~~~~~~l~-~~~l 327 (435)
..|--.||+. + .++...++ . +.+++-+-.+..+.+... ..+++..+. .+
T Consensus 276 ~GGP~ag~~a--~-~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~G-- 350 (954)
T PRK12566 276 YGGPHAAYFA--C-RDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHG-- 350 (954)
T ss_pred CCCCCeeeee--e-hHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhC--
Confidence 5676678884 2 44411110 0 011111111112222111 111111111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccCcceeEec--CC--CHHHHHHHhhhccEEEeCC--CcEEe
Q 013839 328 KSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSLNWEHITNQLGMFCFS--GL--TPYQVDRLAKEFHIYMTQD--GRISM 401 (435)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~--~~--~~~~~~~ll~~~gI~i~pg--gRis~ 401 (435)
.+.++++.++...+..++.+.|++.|. +.... .||--+ .+ ..+.+.....+.||-++-- +++++
T Consensus 351 ----p~Gl~~ia~~~~~~a~~l~~~l~~~g~----~~~~~--~fF~~~~v~~~~~~~~~~~~a~~~~~n~r~~~~~~~~~ 420 (954)
T PRK12566 351 ----PEGLKRIAQRVHRLTAILAAGLEAKGI----KRLNR--HFFDTLTLEVGGAQAAIIESAEAARINLRILGRGRLGV 420 (954)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHhcCC----ccccC--CccceEEEEccCCHHHHHHHHHHCCCeeEEeCCCeEEE
Confidence 156788888888898999999988774 22211 333322 22 3444433334567777643 44444
Q ss_pred c--c-CCCCcHHHHHHHHH
Q 013839 402 A--G-VTTGNVNYLANAIH 417 (435)
Q Consensus 402 ~--~-~~~e~i~~~~~~l~ 417 (435)
+ - .+.+++..++..+.
T Consensus 421 s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 421 SLDETCDEATVARLFDIFL 439 (954)
T ss_pred EeCCCCCHHHHHHHHHHhc
Confidence 3 2 25567777777663
No 391
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.18 E-value=0.028 Score=50.00 Aligned_cols=177 Identities=15% Similarity=0.103 Sum_probs=96.5
Q ss_pred hhCCCCeeeee-ecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCC--CCHHHHHHHHHHHHhcCceeeeeccC
Q 013839 161 RDAQIPERTYH-YYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVD--PTEEQWREISYQFKVKGHFPFFDMAY 237 (435)
Q Consensus 161 ~~~g~~~~~v~-~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~--~~~~~l~~i~~~~~~~~~~vi~Deay 237 (435)
--+|++++.+. ..+.+.-.-|++..++.+++-++.. ++++ +..|... -+++.+++|..+|..|+++-|+..+|
T Consensus 121 ~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dc-ilci---~sttscfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 121 IHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDC-ILCI---HSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred HhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCce-EEEE---eecccccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 35788877763 3233334557888888887654443 3333 3333322 25678999999999999999999997
Q ss_pred CCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHH
Q 013839 238 QGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILL 317 (435)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 317 (435)
.--.. +....+....+-+.-.-++.|+-|.|-.| +|-.++.+-++. ++..+.+......+..|+.....
T Consensus 197 glqse----e~i~~iaa~~~~grida~vqsldknf~vp---vggaiia~fk~n----~iq~iak~ypgrasa~ps~dlli 265 (432)
T KOG3843|consen 197 GLQSE----ECIHKIAAAAECGRIDAFVQSLDKNFMVP---VGGAIIAAFKDN----FIQEIAKMYPGRASASPSLDLLI 265 (432)
T ss_pred ccchH----HHHHHHHHHhhhccHHHHHHHhhhcceee---cchhHhhHhHHH----HHHHHHHhCCCccccCccHHHHH
Confidence 42211 12233444344455556788999998655 343332233444 66666654333333344443333
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013839 318 VATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKL 356 (435)
Q Consensus 318 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 356 (435)
....+.... |.+-..+.++-+...++.+...-+.+
T Consensus 266 tll~~gqn~----f~e~~~eqkemf~~l~~ki~~~ae~~ 300 (432)
T KOG3843|consen 266 TLLSLGQNA----FKELFGEQKEMFLKLRNKIIKFAEAI 300 (432)
T ss_pred HHHHhchhH----HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333333 22333344444444444444333333
No 392
>PLN02672 methionine S-methyltransferase
Probab=96.60 E-value=0.084 Score=57.46 Aligned_cols=240 Identities=8% Similarity=-0.007 Sum_probs=142.5
Q ss_pred CCeeeeecceecCCCCCcccchHHHHHHHHhcCCCCCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhH
Q 013839 50 PYKINLGVGAYRDDKGRPVVLQCVREAEAKIAGSEFLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGA 129 (435)
Q Consensus 50 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a 129 (435)
..-.||+... +.....-.+.+......+.......|.++.|...+|..||.++...+..++++++|+ +.++-..|
T Consensus 387 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 461 (1082)
T PLN02672 387 SGSLDLSFED---ESVADEKIPFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVV--VFPSRAVA 461 (1082)
T ss_pred hhhccccccc---cccchhhccHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceE--EeccHHHH
Confidence 3455666443 111122233445455666555567799999999999999999966666678899999 89999999
Q ss_pred HHHHHHH----HHHhCCCCEEEEcCCCChhhHHHHhhCC--------CCeeeeeecCCCCCCcChHhHHHHhhcCCCCcE
Q 013839 130 CRLFAEF----QRRFHPESHIYFPDPTWSNHHNIWRDAQ--------IPERTYHYYDPDSKSLDFAALMDDIKNAPDSSF 197 (435)
Q Consensus 130 ~~~~~~~----~~~~~~gd~Vlv~~p~y~~~~~~~~~~g--------~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 197 (435)
++.++.+ ++++..+.+-.+|. . +...+...| -.+..+.. +. + -+.+.+.+++ -+++
T Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~--~~~~~~~~~~--~~~~ 529 (1082)
T PLN02672 462 IENALRLFSPRLAIVDEHLTRWLPK-K---WLTSLAIENATSDSKSDDVITVIEA--PR--Q--SDLVIELIKK--LKPQ 529 (1082)
T ss_pred HHHHHHhhChHHHhhhhhhhccCCH-H---HHhHhhhhcccccCccCCeEEEEeC--CC--c--chHHHHHHHh--CCCe
Confidence 9887532 33444443333331 2 222222222 11111111 11 1 1244444543 2456
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeecc-CCCccCCCCcccHHHHHHhhh--cCCeEEEEecccccccc
Q 013839 198 FLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMA-YQGFASGDLDKDAQAIRIFLE--DEHLIGCAQSYAKSMGL 274 (435)
Q Consensus 198 ~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Dea-y~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~g~ 274 (435)
+++..-.+ +-..+-...+.|.+.+++-|+.++.|.. |..++..+ .....+..+.. .+.+..++.++-|.-=.
T Consensus 530 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (1082)
T PLN02672 530 VVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLP--GSNGVLKYLAGHPLPSHAAIICGLVKNQVY 604 (1082)
T ss_pred EEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCC--CcccHHHHhcCCCCCcchhHhhhhhhcccc
Confidence 77754333 2334566788999999999999999998 44444332 23333333332 34566677788887656
Q ss_pred cCCcccEEEEEecChhHHHHHHHHHHHHhhccccCCChhHHHH
Q 013839 275 YGHRVGCLSILCVDSKQAAAIRSQIQQIARAMYGSPPVHGILL 317 (435)
Q Consensus 275 ~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 317 (435)
+.+-+.+++ .-++. +.+.+.+......++.+.++|..
T Consensus 605 ~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 641 (1082)
T PLN02672 605 SDLEVAFVI--SENEA----VLKALSKTGEVLEGRTAIISQFY 641 (1082)
T ss_pred ccceEEEEe--cCcHH----HHHHHHHHHHhhccchHHHHHHH
Confidence 899999996 44666 66666665555555666666654
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.38 E-value=0.053 Score=54.26 Aligned_cols=143 Identities=13% Similarity=0.008 Sum_probs=94.3
Q ss_pred CCCCCC---CcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHH-HHHHH-hCCC---C-EEEEcCCCChh
Q 013839 85 FLESIS---ASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFA-EFQRR-FHPE---S-HIYFPDPTWSN 155 (435)
Q Consensus 85 ~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~-~~~~~-~~~g---d-~Vlv~~p~y~~ 155 (435)
++.|.| .+|+.++.+.+.+.+-...+. +++. ..-++|.++-..-+ .+.+- -..| . .-++|...++.
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~----D~~s-~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGT 642 (1001)
T KOG2040|consen 568 IHPFAPVEQAQGYQQLFTELEKDLCEITGF----DSFS-LQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGT 642 (1001)
T ss_pred CCCCCchHHHhhHHHHHHHHHHHhheeecc----ccee-ecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCC
Confidence 556766 468888888888887322221 1222 13344433322221 12222 2233 2 34677777766
Q ss_pred hHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeec
Q 013839 156 HHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDM 235 (435)
Q Consensus 156 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~De 235 (435)
....+.++|+++++|.+ ..++.+|..+|+++.+++.+.-.++.+. .|+-.-.=.+.+++++++.++||--|..|.
T Consensus 643 NPASA~MagmkvvpV~~--~~~G~id~~dLk~kaekh~~~Laa~MvT---YPST~GvfE~~i~d~cd~iHehGGQVYlDG 717 (1001)
T KOG2040|consen 643 NPASAAMAGMKVVPVGC--DANGNIDMVDLKAKAEKHKDNLAALMVT---YPSTHGVFEEGIDDICDIIHEHGGQVYLDG 717 (1001)
T ss_pred ChhhHHhcCCEEEEeec--cCCCCccHHHHHHHHHHhhhhhheeEEe---cccccccccccHHHHHHHHHhcCCEEEecC
Confidence 66778899999999987 4567899999999998776666666664 444343446778999999999999999999
Q ss_pred cC
Q 013839 236 AY 237 (435)
Q Consensus 236 ay 237 (435)
+-
T Consensus 718 AN 719 (1001)
T KOG2040|consen 718 AN 719 (1001)
T ss_pred CC
Confidence 84
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=94.50 E-value=1.5 Score=39.82 Aligned_cols=311 Identities=15% Similarity=0.128 Sum_probs=150.3
Q ss_pred CCCeeeeecceecCCCCCcccchHHHHHHHHhcC--CCCC-----CCCCCcc--cHHHHHHHHHhHcCCCCccccCC--C
Q 013839 49 SPYKINLGVGAYRDDKGRPVVLQCVREAEAKIAG--SEFL-----ESISASV--STKMVEESVKLVYGKDSDVVKEG--R 117 (435)
Q Consensus 49 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~Y~~~~g--~~~lr~~ia~~l~~~~~~~~~~~--~ 117 (435)
...+++|+.|.. ..|..++.++.+.+.+ +... +..+.++ +-.--+...+.|.+. |+ +
T Consensus 5 ~~~vvnFaaGPA------klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlni------Pdn~~ 72 (370)
T KOG2790|consen 5 PERVVNFAAGPA------KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNI------PDNYK 72 (370)
T ss_pred ccceeecCCCcc------cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcC------CCcee
Confidence 457889998873 4556666666666652 2111 1112111 111111222222333 22 2
Q ss_pred eeeEecCCchhHHHHHHHHHHHh--CCC---CEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCC--CCcChHhHHHHhh
Q 013839 118 SAGVQALSGTGACRLFAEFQRRF--HPE---SHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDS--KSLDFAALMDDIK 190 (435)
Q Consensus 118 v~~~~t~gg~~a~~~~~~~~~~~--~~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~--~~~d~e~l~~~i~ 190 (435)
|. .+-.||++-+..+ .+.++ ..| |-|+..+.+-..+.++-+..-...+..+.. +.. --+|.+.++-.
T Consensus 73 vl-f~QGGGt~qFaAv--~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k-~y~ygkvPd~~~w~~~-- 146 (370)
T KOG2790|consen 73 VL-FLQGGGTGQFAAV--PLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLK-SYTYGKVPDPSTWELN-- 146 (370)
T ss_pred EE-EEeCCCccccccc--chhhhccccCCccceEEeccccHHHHHHHHhhCCceEEecccc-ccccCcCCChhhcccC--
Confidence 33 1355667666555 44444 455 455555444444444433322223333331 212 23444443221
Q ss_pred cCCCCcEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecc
Q 013839 191 NAPDSSFFLLHPSAHNPT--GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSY 268 (435)
Q Consensus 191 ~~~~~~~~v~~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 268 (435)
++...+..| .|.| |+-++.-. .-.-++.+++.|.. +.|..-+. +....-+++.+.
T Consensus 147 ---~da~yvyyC--aNETVHGVEf~~~P------~~~~~~~vlVaDmS-SnflSrpv-----------Dvsk~gvi~aGA 203 (370)
T KOG2790|consen 147 ---PDASYVYYC--ANETVHGVEFDFIP------VNDPKGAVLVADMS-SNFLSRPV-----------DVSKFGVIFAGA 203 (370)
T ss_pred ---CCccEEEEe--cCceeeceecCCCC------CCCCCCceEEEecc-cchhcCCc-----------cchhcceEEecc
Confidence 344555554 4555 55443211 11235788888887 33332211 223445677889
Q ss_pred cccccccCCcccEEEEEecChhHHHHHHHHHHHH------------hhccccCCChhHHHHHHHHh----CChhhHHHHH
Q 013839 269 AKSMGLYGHRVGCLSILCVDSKQAAAIRSQIQQI------------ARAMYGSPPVHGILLVATIL----SDPNLKSLWI 332 (435)
Q Consensus 269 SK~~g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~------------~~~~~~~~~~~~q~~~~~~l----~~~~l~~~~~ 332 (435)
.|.+|++|+-+ .+ . .++ ++...... ....+..+|.++.++....+ +.+
T Consensus 204 QKN~G~aG~Tv-vi---v-r~d----llg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~G------- 267 (370)
T KOG2790|consen 204 QKNVGPAGVTV-VI---V-RKD----LLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKG------- 267 (370)
T ss_pred ccccCccccEE-EE---E-ehh----hhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcc-------
Confidence 99999888643 22 1 555 44333221 11334556666555543333 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-CCCCCccc-cccC--cceeEecC-----CCHHHHHHHhhhccEEEeCC-----C-
Q 013839 333 DEVKIMADRIQRKRTTLRQNLEKL-GSSLNWEH-ITNQ--LGMFCFSG-----LTPYQVDRLAKEFHIYMTQD-----G- 397 (435)
Q Consensus 333 ~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~-~~~~--~g~~~~~~-----~~~~~~~~ll~~~gI~i~pg-----g- 397 (435)
.++.+.+...++.+.+++.+... |+ ..+ ..+. .-|-+... +..+++....+ ++..-..| |
T Consensus 268 -Gl~a~e~~n~~KskllYd~iD~s~gf---y~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~-~~mv~LKGhRSVGGi 342 (370)
T KOG2790|consen 268 -GLAAMEKLNQEKSKLLYDAIDNSNGF---YRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAK-EHMVQLKGHRSVGGI 342 (370)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhcCCe---EEcccchhhhhhcccceeecchHHHHHHHHHHHH-hhhhccccccccccc
Confidence 25666677778888999998765 32 111 1111 11111111 23456655544 45444444 3
Q ss_pred cEEeccC-CCCcHHHHHHHHHHHHH
Q 013839 398 RISMAGV-TTGNVNYLANAIHEVTR 421 (435)
Q Consensus 398 Ris~~~~-~~e~i~~~~~~l~~~l~ 421 (435)
|-|+.+. +-++.+.+++-++++.+
T Consensus 343 RASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 343 RASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred hhhhhccccHHHHHHHHHHHHHHHH
Confidence 8887653 66777777666666543
No 395
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=92.80 E-value=7.9 Score=35.74 Aligned_cols=297 Identities=15% Similarity=0.125 Sum_probs=158.5
Q ss_pred HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCC---CEEEEcCCCCh----hhHHHHhhCCCCe
Q 013839 95 TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPE---SHIYFPDPTWS----NHHNIWRDAQIPE 167 (435)
Q Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g---d~Vlv~~p~y~----~~~~~~~~~g~~~ 167 (435)
......++..+ |.. +++|. +.++-|--++.+ +.++..|- -+++.+.-.|+ ...+.++..|..+
T Consensus 114 e~il~l~~~iV-GA~-----e~Eva--vmNsLTvNlh~L--l~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~ 183 (465)
T KOG3846|consen 114 EPILPLLAPIV-GAQ-----ENEVA--VMNSLTVNLHSL--LISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISP 183 (465)
T ss_pred hhhhhhhhhhc-cCC-----chhhh--hHhhhhhHHHHH--HHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCCh
Confidence 34445555554 332 56777 666666666666 66677765 35777765553 3445666777764
Q ss_pred ee--eeecC-CCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCC
Q 013839 168 RT--YHYYD-PDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGD 244 (435)
Q Consensus 168 ~~--v~~~~-~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~ 244 (435)
.. +.+.+ +....+..+++.+.|+++.+...+++++-.+.=||..++.. +|...-+..|++|=.|-++. ++-
T Consensus 184 e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~---aIT~Agq~kgc~VGfDLAHA-vgN-- 257 (465)
T KOG3846|consen 184 ENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIG---AITFAGQFKGCLVGFDLAHA-VGN-- 257 (465)
T ss_pred HHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchh---hhhhcccCCCcEechhhhhh-hcC--
Confidence 32 12211 22246778999999988877888999999999999998654 66654555688888888742 221
Q ss_pred CcccHHHHHHhhhcCCeEEEEecccccc--cccCCcccEEEEEecChhHHHHHHHHHHHH--------------------
Q 013839 245 LDKDAQAIRIFLEDEHLIGCAQSYAKSM--GLYGHRVGCLSILCVDSKQAAAIRSQIQQI-------------------- 302 (435)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~~~s~SK~~--g~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-------------------- 302 (435)
. ++ .+.+ .+-.+.++..-|.+ |..| +|-+.+ .+++......++.-.
T Consensus 258 V-----pL-~LHd-WgVDFACWCSYKYlnaGaGg--IgGlFv---Hekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipG 325 (465)
T KOG3846|consen 258 V-----PL-QLHD-WGVDFACWCSYKYLNAGAGG--IGGLFV---HEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPG 325 (465)
T ss_pred C-----ce-EEee-cCCceEEEeeecccccCCCc--cceeee---ehhhhcchhhHHhhhccCCcchhhhhccccccCcc
Confidence 1 11 1111 23345555555654 3223 343332 344333232222210
Q ss_pred -hhccccCCChhHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC--------Ccccccc----Cc
Q 013839 303 -ARAMYGSPPVHGILLVATILSDPNLKSLWIDEVKIMADRIQRKRTTLRQNLEKLGSSL--------NWEHITN----QL 369 (435)
Q Consensus 303 -~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--------~~~~~~~----~~ 369 (435)
.....+++|.+...++...| +++.++ .+++.|++-.-...++...++...+.. .+..++| +.
T Consensus 326 a~GfRiSNPpi~~v~al~~SL---e~F~q~--~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~er 400 (465)
T KOG3846|consen 326 ALGFRISNPPIIDVVALRSSL---ELFAQF--NINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDER 400 (465)
T ss_pred ccccccCCCcHhHHHHHHhhH---HHHHHh--hHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccc
Confidence 01122455555444443333 333332 255565555555555554444332110 1112222 11
Q ss_pred ceeEec--CCCHHHHHHHhhhccEEEe---CCC-cEEeccC--CCCcHHHHHHHHHHHHHhhh
Q 013839 370 GMFCFS--GLTPYQVDRLAKEFHIYMT---QDG-RISMAGV--TTGNVNYLANAIHEVTRSEQ 424 (435)
Q Consensus 370 g~~~~~--~~~~~~~~~ll~~~gI~i~---pgg-Ris~~~~--~~e~i~~~~~~l~~~l~~~~ 424 (435)
|.-+-+ ..+...+...|.++|+..- |.+ |+....+ +..++..++..|.+++..+.
T Consensus 401 GcQLsl~Fssp~~~vfqeL~krGv~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 401 GCQLSLYFSSPTPKVFQELHKRGVIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred cceEEEEeCCCchHHHHHHHHcCeeccccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 222222 2223344334467899884 445 8874221 67889999999999887654
No 396
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=75.47 E-value=6.2 Score=37.55 Aligned_cols=71 Identities=8% Similarity=-0.029 Sum_probs=47.9
Q ss_pred hHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 156 HHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 156 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
..+.+..+++++....+.|..+|.+..+...+.-. ... . .....+.|-.+|++|+++|++.|+++|+-||=
T Consensus 23 ~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~---~ga--~--~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 23 YIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTE---IGG--S--TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHHhCCcEEEEEeecCCcceeeecCcccccc---ccc--c--cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 34556678889999888777777776555433221 111 0 01224556679999999999999999988775
No 397
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=73.33 E-value=7.9 Score=36.40 Aligned_cols=69 Identities=12% Similarity=0.046 Sum_probs=47.1
Q ss_pred HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 157 HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 157 ~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
.+.+..++.++....+.|.++|.+......+.-... .. .++ .+.+-.+|++|+++|++.|+++|+-||-
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g-~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKG-GQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhc-cc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 445567888999888877777777665554433211 11 112 2334578999999999999999987775
No 398
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=70.91 E-value=7.3 Score=37.43 Aligned_cols=66 Identities=15% Similarity=0.050 Sum_probs=46.8
Q ss_pred hHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 156 HHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 156 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
....+..+++++....+.|.++|.+......+.-. .. + ...+-.+|++|+++|++.|+++|+-||-
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~---~g--a-------~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 23 TIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSK---KG--A-------YSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhh---cc--C-------cCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 34455678888999988777777777665544332 11 1 1235568999999999999999987774
No 399
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=70.48 E-value=6.4 Score=40.57 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=33.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCC
Q 013839 206 NPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASG 243 (435)
Q Consensus 206 NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~ 243 (435)
-||....++++++++++-|+++||-||.|-+|..|..+
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d 242 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPPD 242 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCC
Confidence 35566668999999999999999999999999988864
No 400
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=70.25 E-value=35 Score=25.70 Aligned_cols=71 Identities=10% Similarity=-0.068 Sum_probs=45.7
Q ss_pred CChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCcee
Q 013839 152 TWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFP 231 (435)
Q Consensus 152 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~v 231 (435)
....|...++.+|++.... - ...+..-....|+..+. ++.+|++ +|+.+ +..-...+-+.|+++++++
T Consensus 11 ~~~~~~~~~~~~G~~~~~h-g-~~~~~~~~~~~l~~~i~----~aD~VIv-----~t~~v-sH~~~~~vk~~akk~~ip~ 78 (97)
T PF10087_consen 11 RERRYKRILEKYGGKLIHH-G-RDGGDEKKASRLPSKIK----KADLVIV-----FTDYV-SHNAMWKVKKAAKKYGIPI 78 (97)
T ss_pred cHHHHHHHHHHcCCEEEEE-e-cCCCCccchhHHHHhcC----CCCEEEE-----EeCCc-ChHHHHHHHHHHHHcCCcE
Confidence 3456778889999988777 2 12212222234777775 3455554 35443 5666788999999999887
Q ss_pred eee
Q 013839 232 FFD 234 (435)
Q Consensus 232 i~D 234 (435)
+.=
T Consensus 79 ~~~ 81 (97)
T PF10087_consen 79 IYS 81 (97)
T ss_pred EEE
Confidence 763
No 401
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=69.82 E-value=15 Score=29.29 Aligned_cols=56 Identities=13% Similarity=0.059 Sum_probs=39.4
Q ss_pred CeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEe-----CCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 013839 166 PERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLH-----PSAHNPTGVDPTEEQWREISYQFKVKG 228 (435)
Q Consensus 166 ~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~-----~~p~NPtG~~~~~~~l~~i~~~~~~~~ 228 (435)
+++.+|+ .+.+|++.+.+++. .....|++ .++|+..|......+++.+-++..+.|
T Consensus 30 riIrvpC----~Grv~~~~il~Af~---~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 30 RIIRVPC----SGRVDPEFILRAFE---KGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred EEEEccC----CCccCHHHHHHHHH---cCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 3455554 45899999999998 44555555 345668888887777777777777655
No 402
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=68.56 E-value=9.1 Score=36.11 Aligned_cols=63 Identities=14% Similarity=0.096 Sum_probs=42.8
Q ss_pred HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 157 HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 157 ~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
.+.+..++.++....+.|..+|.+.....-+.-. .. ..|-.+|++++++|++.|+++|+-||=
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~---~g-----------~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 24 LDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQ---KA-----------SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred HHHHHHhCCeEEEEEEecCCCceeecCCCccccc---cC-----------CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 4455677888888888666666665444322111 00 134568999999999999999987764
No 403
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=65.57 E-value=93 Score=27.57 Aligned_cols=97 Identities=10% Similarity=0.091 Sum_probs=62.0
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEE-----EcC-C-CChh----h---HHHHhhCCCCeeeeeecCCCCCCcChHhHHH
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIY-----FPD-P-TWSN----H---HNIWRDAQIPERTYHYYDPDSKSLDFAALMD 187 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vl-----v~~-p-~y~~----~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 187 (435)
+.+||..++.++ .. .+..|..|. .|. + +|.. . .-.++..|..++.....- ...-..++|.+
T Consensus 6 L~SGGKDS~~Al--~~-a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve~L~~ 80 (223)
T COG2102 6 LYSGGKDSFYAL--YL-ALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVEELKE 80 (223)
T ss_pred EEecCcHHHHHH--HH-HHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHHHHHH
Confidence 689999997666 33 345664431 222 2 2321 1 123456777776665421 12346788888
Q ss_pred HhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceee
Q 013839 188 DIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPF 232 (435)
Q Consensus 188 ~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi 232 (435)
++..- +...++ +|.+.+..+...+-.+|++.|+-++
T Consensus 81 ~l~~l--~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 81 ALRRL--KVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHhC--cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 88743 244666 7999999999999999999997643
No 404
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=62.48 E-value=18 Score=36.06 Aligned_cols=78 Identities=13% Similarity=0.046 Sum_probs=48.3
Q ss_pred hHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcE-----EEEeC----CC--CCCCCCCCCHHHHHHHHHHH
Q 013839 156 HHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSF-----FLLHP----SA--HNPTGVDPTEEQWREISYQF 224 (435)
Q Consensus 156 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~-----~v~~~----~p--~NPtG~~~~~~~l~~i~~~~ 224 (435)
+...+..+++++....+.|..+|.+.....-+.-.....+.. -.+.+ .+ ..+.+-.+|++|+++|++.|
T Consensus 27 ~Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA 106 (445)
T cd06569 27 LLDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYA 106 (445)
T ss_pred HHHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHH
Confidence 344556788889999887777787776665443221000000 00111 11 12335578999999999999
Q ss_pred HhcCceeee
Q 013839 225 KVKGHFPFF 233 (435)
Q Consensus 225 ~~~~~~vi~ 233 (435)
+++++-||-
T Consensus 107 ~~rgI~VIP 115 (445)
T cd06569 107 KARHIEVIP 115 (445)
T ss_pred HHcCCEEEE
Confidence 999988764
No 405
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=60.66 E-value=19 Score=34.66 Aligned_cols=77 Identities=13% Similarity=-0.008 Sum_probs=47.1
Q ss_pred HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCc-EEEE---eCCCCCCCCCCCCHHHHHHHHHHHHhcCceee
Q 013839 157 HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSS-FFLL---HPSAHNPTGVDPTEEQWREISYQFKVKGHFPF 232 (435)
Q Consensus 157 ~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~-~~v~---~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi 232 (435)
.+.+..++.+.....+.|..+|.+.....-+.-....-+. ..+- ...-..|.|-.+|++|+++|++.|+++|+-||
T Consensus 24 Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 24 IDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred HHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEE
Confidence 3455577888888888777777776655433221100000 0000 00112344667899999999999999998776
Q ss_pred e
Q 013839 233 F 233 (435)
Q Consensus 233 ~ 233 (435)
-
T Consensus 104 P 104 (357)
T cd06563 104 P 104 (357)
T ss_pred E
Confidence 5
No 406
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=59.07 E-value=1e+02 Score=29.04 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=28.9
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeecc
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Dea 236 (435)
.++++ +.+=|.| ++.+...+|++.|++.+..++.|..
T Consensus 131 d~Vvl-sGSlP~g--~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 131 DIVVL-SGSLPPG--VPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CEEEE-eCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECC
Confidence 34443 4455766 4688899999999999999999976
No 407
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=56.73 E-value=1.4e+02 Score=26.21 Aligned_cols=92 Identities=11% Similarity=0.093 Sum_probs=51.4
Q ss_pred CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCc
Q 013839 117 RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSS 196 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 196 (435)
+++ ++.||..|...+ ..++..|-.|.+.+|....-...+...| ++..+.- . ++.+++ ...
T Consensus 11 ~vl--VvGgG~va~rk~---~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~dl--------~~~ 70 (205)
T TIGR01470 11 AVL--VVGGGDVALRKA---RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADIL--------EGA 70 (205)
T ss_pred eEE--EECcCHHHHHHH---HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHHh--------CCc
Confidence 555 777888776655 4456678788888887653333333333 4433321 1 222332 233
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCcee-eeecc
Q 013839 197 FFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFP-FFDMA 236 (435)
Q Consensus 197 ~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~v-i~Dea 236 (435)
.+++. .+++| +--+.+.+.|++.++++ +.|+.
T Consensus 71 ~lVi~-at~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 71 FLVIA-ATDDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred EEEEE-CCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 45443 34443 22357899999999877 35554
No 408
>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism]
Probab=56.38 E-value=1.2e+02 Score=27.38 Aligned_cols=80 Identities=13% Similarity=0.027 Sum_probs=49.1
Q ss_pred CeeeEecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCC
Q 013839 117 RSAGVQALSGTGACRLFAEFQRR-FHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDS 195 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 195 (435)
.++ ..++|+.|..++ +.+. +.==.++++|.-.-..-....+.+|++++.+.... -+-|.+.+.+. .+
T Consensus 75 gvi--thSSGNHaqAla--laAk~~giPa~IVvP~~AP~~Kv~a~~~Yga~ii~~e~~~-----~sRE~va~~lt---ee 142 (323)
T KOG1251|consen 75 GVI--THSSGNHAQALA--LAAKILGIPATIVVPKDAPICKVAATRGYGANIIFCEPTV-----ESRESVAKDLT---EE 142 (323)
T ss_pred ceE--eecCCcHHHHHH--HHHHhcCCCeEEEecCCChHHHHHHHHhcCceEEEecCcc-----chHHHHHHHHH---Hh
Confidence 455 467778776666 3332 22116777776544444566788999999986532 25678888887 45
Q ss_pred cEEEEeCCCCCCC
Q 013839 196 SFFLLHPSAHNPT 208 (435)
Q Consensus 196 ~~~v~~~~p~NPt 208 (435)
+..+++..-+.|.
T Consensus 143 ~g~~~i~Py~~p~ 155 (323)
T KOG1251|consen 143 TGYYLIHPYNHPS 155 (323)
T ss_pred cCcEEeCCCCCcc
Confidence 5566654444454
No 409
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=54.20 E-value=49 Score=23.02 Aligned_cols=21 Identities=5% Similarity=-0.046 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhcCceeeee
Q 013839 214 EEQWREISYQFKVKGHFPFFD 234 (435)
Q Consensus 214 ~~~l~~i~~~~~~~~~~vi~D 234 (435)
++++++|.+++.+-|-+||.|
T Consensus 50 ~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 50 PEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred hHHHHHHHHHHHcCCEEEEeC
Confidence 589999999999888888765
No 410
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=52.34 E-value=12 Score=35.95 Aligned_cols=66 Identities=17% Similarity=0.055 Sum_probs=43.5
Q ss_pred HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 157 HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA--PDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 157 ~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~--~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
...+..++.+.....+.|.++|.+....+.+.-... .... +.| .+|++|+++|++.|+++|+-||-
T Consensus 24 id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~~~~~----------~~~-~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 24 IDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAYRPSD----------AGG-YYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTESTTC----------TES-EBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HHHHHHcCCcEEEEEEecCCCCccccCCCccccccCcccccc----------ccc-cCCHHHHHHHHHHHHHcCCceee
Confidence 445567888999998877777777665544433210 0111 334 89999999999999999987775
No 411
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=51.41 E-value=1.5e+02 Score=27.77 Aligned_cols=105 Identities=8% Similarity=0.054 Sum_probs=61.4
Q ss_pred eEecCCchhHHHHHH--HHHHHhCCCCEEEEcCCC--Chhh--HHHHhhCCCCeeeeeecCCCCC--CcChHhHHHHhhc
Q 013839 120 GVQALSGTGACRLFA--EFQRRFHPESHIYFPDPT--WSNH--HNIWRDAQIPERTYHYYDPDSK--SLDFAALMDDIKN 191 (435)
Q Consensus 120 ~~~t~gg~~a~~~~~--~~~~~~~~gd~Vlv~~p~--y~~~--~~~~~~~g~~~~~v~~~~~~~~--~~d~e~l~~~i~~ 191 (435)
.++|.||.+++++-. ++.+.+.=.-..++..+. |... .......|+.++.++. ..++ ....+++.+.+++
T Consensus 66 TlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~--~~d~~~~~~~~~~~e~~~~ 143 (323)
T COG2515 66 TLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDA--GTDIGINASAEELAEEVRK 143 (323)
T ss_pred EEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecC--CCChhhchhhHHHHHHHHh
Confidence 347999999887764 222222222333444443 2222 2233467888888765 3344 3455777777765
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 013839 192 APDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVK 227 (435)
Q Consensus 192 ~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~ 227 (435)
...++ .++..-..||.|...-.+-..||.+.++++
T Consensus 144 ~g~kp-yvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~ 178 (323)
T COG2515 144 QGGKP-YVIPEGGSSPLGALGYVRLALEIAEQAEQL 178 (323)
T ss_pred cCCCC-cEeccCCcCccccccHHHHHHHHHHHHhhc
Confidence 54443 333334479988777777777888888763
No 412
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=49.91 E-value=67 Score=30.49 Aligned_cols=77 Identities=13% Similarity=0.210 Sum_probs=51.3
Q ss_pred CCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCce
Q 013839 151 PTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHF 230 (435)
Q Consensus 151 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 230 (435)
-.|+.|.+.++.-..++++++...+ ...+-...++.. . |-|++ .-|.. ++.++.++|++.|++.+ .
T Consensus 59 k~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~~---~-K~VL~---EKPla--~n~~e~~~iveaA~~rg-v 124 (351)
T KOG2741|consen 59 KAYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALNK---G-KHVLC---EKPLA--MNVAEAEEIVEAAEARG-V 124 (351)
T ss_pred ccccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHHc---C-CcEEe---ccccc--CCHHHHHHHHHHHHHcC-c
Confidence 3678899999988889999876322 233444444542 2 22444 45555 57889999999999998 5
Q ss_pred eeeeccCCCcc
Q 013839 231 PFFDMAYQGFA 241 (435)
Q Consensus 231 vi~Deay~~~~ 241 (435)
.+.|..|.-+.
T Consensus 125 ~~meg~~~R~~ 135 (351)
T KOG2741|consen 125 FFMEGLWWRFF 135 (351)
T ss_pred EEEeeeeeecC
Confidence 66677654443
No 413
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=49.70 E-value=2.3e+02 Score=26.70 Aligned_cols=132 Identities=15% Similarity=0.083 Sum_probs=68.0
Q ss_pred ccHHHHHHHHHhHcCCCCccccCCCeeeEe-cCCchhHHHHHHHHHH-HhCCCCEEEEcC--CCChhhHHHHhhCCCCee
Q 013839 93 VSTKMVEESVKLVYGKDSDVVKEGRSAGVQ-ALSGTGACRLFAEFQR-RFHPESHIYFPD--PTWSNHHNIWRDAQIPER 168 (435)
Q Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~-t~gg~~a~~~~~~~~~-~~~~gd~Vlv~~--p~y~~~~~~~~~~g~~~~ 168 (435)
...+|.+.+.+...... ...+++++. .-||.+...++..+.. +-..|.+|++.+ |..+... ...|.+..
T Consensus 74 ~~~~l~~~l~~~~~~~~----~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~~~~~~---~~lg~~~~ 146 (322)
T TIGR03815 74 AEGWLVELLADLDQSPP----ARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPWGGGLD---LLLGAEDV 146 (322)
T ss_pred CHHHHHHHHHhhccCCC----CCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCCCCCee---eeecCCCC
Confidence 35577777776531111 123454332 3466665554443222 234677776655 4433221 12232211
Q ss_pred e-e---eecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeecc
Q 013839 169 T-Y---HYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 169 ~-v---~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Dea 236 (435)
. . .. ......+|.+.+.+.+.. ...+-+++.+..+ +..++.+.++++.+..+++-=++|+|-.
T Consensus 147 ~~~~~~~~-~~~~~~~~~~~l~~~~~~---~~~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p 213 (322)
T TIGR03815 147 PGLRWPDL-SQARGRLPAGALRDALPR---RGGLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLP 213 (322)
T ss_pred CCcCHHHH-hhcCCCcCHHHHHHhCCC---cCCeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCC
Confidence 0 0 11 011234566777766652 2345566655544 3446778888888877765458899976
No 414
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=45.81 E-value=2.1e+02 Score=25.18 Aligned_cols=79 Identities=14% Similarity=0.085 Sum_probs=44.5
Q ss_pred CCCCEE-EEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 013839 141 HPESHI-YFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWRE 219 (435)
Q Consensus 141 ~~gd~V-lv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~ 219 (435)
.+|-.| ++..+.-......++..|++++..+. -|.+.|.++++ .-..++++..+.++ ...+.-..
T Consensus 20 ~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-------~~~~~l~~al~---g~d~v~~~~~~~~~----~~~~~~~~ 85 (233)
T PF05368_consen 20 SAGFSVRALVRDPSSDRAQQLQALGAEVVEADY-------DDPESLVAALK---GVDAVFSVTPPSHP----SELEQQKN 85 (233)
T ss_dssp HTTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-------T-HHHHHHHHT---TCSEEEEESSCSCC----CHHHHHHH
T ss_pred hCCCCcEEEEeccchhhhhhhhcccceEeeccc-------CCHHHHHHHHc---CCceEEeecCcchh----hhhhhhhh
Confidence 355443 33333322334456678888775543 17899999997 33345544433332 23556678
Q ss_pred HHHHHHhcCceeee
Q 013839 220 ISYQFKVKGHFPFF 233 (435)
Q Consensus 220 i~~~~~~~~~~vi~ 233 (435)
+++.|++.|+-.++
T Consensus 86 li~Aa~~agVk~~v 99 (233)
T PF05368_consen 86 LIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHT-SEEE
T ss_pred HHHhhhccccceEE
Confidence 89999987755443
No 415
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=45.71 E-value=40 Score=32.08 Aligned_cols=56 Identities=11% Similarity=0.009 Sum_probs=36.4
Q ss_pred CCCEEEEcCCCCh-hhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC
Q 013839 142 PESHIYFPDPTWS-NHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT 208 (435)
Q Consensus 142 ~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt 208 (435)
++.+|++.+.+.. +....+...|+++..||.. .+.+++.+. . + -.+++.+-|.+|.
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl~~-~---p-DGiflSNGPGDP~ 234 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEILAL-N---P-DGIFLSNGPGDPA 234 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHHhh-C---C-CEEEEeCCCCChh
Confidence 3567888887664 5666777889999999862 356666442 1 1 2455555588885
No 416
>PLN03244 alpha-amylase; Provisional
Probab=45.56 E-value=36 Score=36.20 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=34.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCC
Q 013839 203 SAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASG 243 (435)
Q Consensus 203 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~ 243 (435)
+.--|+....++++++++++.|++.|+-||.|-+|..+..+
T Consensus 429 ~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 429 NFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 33456667778999999999999999999999999877754
No 417
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=45.40 E-value=80 Score=24.42 Aligned_cols=21 Identities=29% Similarity=0.124 Sum_probs=13.5
Q ss_pred CHHHHHHHHHHHHhcCceeee
Q 013839 213 TEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 213 ~~~~l~~i~~~~~~~~~~vi~ 233 (435)
+.++.++|.+.+++++..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 566667777777776665544
No 418
>PF09885 DUF2112: Uncharacterized protein conserved in archaea (DUF2112); InterPro: IPR012356 The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=45.19 E-value=31 Score=27.55 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=38.5
Q ss_pred eeEecCC--CHHHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 371 MFCFSGL--TPYQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 371 ~~~~~~~--~~~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
.|.++|+ +.+++..++++.+|.+. -+.|.. ++++...++.+++++++.+
T Consensus 93 ~FGC~GCartnEL~~~lir~k~iPiL---el~YP~-~~ee~~~~V~~I~~FL~~L 143 (143)
T PF09885_consen 93 AFGCMGCARTNELTKYLIRQKGIPIL---ELKYPT-NEEEAIDFVNKINDFLKSL 143 (143)
T ss_pred cccccccccHHHHHHHHHhhcCCceE---EeeCCC-ChHHHHHHHHHHHHHHhcC
Confidence 3677887 56788888888899886 456644 7888999999999998753
No 419
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=43.96 E-value=2.3e+02 Score=25.13 Aligned_cols=105 Identities=14% Similarity=0.094 Sum_probs=54.8
Q ss_pred EEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCC----------------
Q 013839 145 HIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPT---------------- 208 (435)
Q Consensus 145 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPt---------------- 208 (435)
+.+|.+| ..|...+..+|++.+.+.. |. ..++..+...+++.+.+..++ -||..|-
T Consensus 67 HLMV~~p--~~~i~~fa~agad~It~H~--E~--~~~~~r~i~~Ik~~G~kaGv~--lnP~Tp~~~i~~~l~~vD~VllM 138 (220)
T COG0036 67 HLMVENP--DRYIEAFAKAGADIITFHA--EA--TEHIHRTIQLIKELGVKAGLV--LNPATPLEALEPVLDDVDLVLLM 138 (220)
T ss_pred EEecCCH--HHHHHHHHHhCCCEEEEEe--cc--CcCHHHHHHHHHHcCCeEEEE--ECCCCCHHHHHHHHhhCCEEEEE
Confidence 4556666 3455666667777777665 22 335556666666542222222 2444332
Q ss_pred -------CCCCCHHHHHHHHHHHHhc----CceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEec
Q 013839 209 -------GVDPTEEQWREISYQFKVK----GHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQS 267 (435)
Q Consensus 209 -------G~~~~~~~l~~i~~~~~~~----~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 267 (435)
|..+.++-+++|.++-+.. ++.+=+|.- . ....+..+...+-++++.+|
T Consensus 139 sVnPGfgGQ~Fi~~~l~Ki~~lr~~~~~~~~~~IeVDGG--------I--~~~t~~~~~~AGad~~VaGS 198 (220)
T COG0036 139 SVNPGFGGQKFIPEVLEKIRELRAMIDERLDILIEVDGG--------I--NLETIKQLAAAGADVFVAGS 198 (220)
T ss_pred eECCCCcccccCHHHHHHHHHHHHHhcccCCeEEEEeCC--------c--CHHHHHHHHHcCCCEEEEEE
Confidence 6777666666655543322 334444432 1 23355556566677887765
No 420
>TIGR03271 methan_mark_5 putative methanogenesis marker protein 5. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=43.45 E-value=40 Score=26.88 Aligned_cols=49 Identities=14% Similarity=0.070 Sum_probs=38.1
Q ss_pred eeEecCC--CHHHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHHHHHHhh
Q 013839 371 MFCFSGL--TPYQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIHEVTRSE 423 (435)
Q Consensus 371 ~~~~~~~--~~~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~~~l~~~ 423 (435)
.|.++|+ +.+++..++++.+|.+. .+-|.. ++++...++++++++++++
T Consensus 92 ~FGC~GCartnEL~~~lir~k~iPiL---El~YP~-~~e~~~~~V~~i~~FL~~l 142 (142)
T TIGR03271 92 AFGCMGCARTNELTVFLVRRKDIPIL---ELDYPT-SEEEGIIFVRKINDFLDSL 142 (142)
T ss_pred cccccccccHHHHHHHHHhhcCCceE---EeeCCC-ChhHHHHHHHHHHHHHhcC
Confidence 3777887 46788888898999886 455544 7888999999999998753
No 421
>smart00642 Aamy Alpha-amylase domain.
Probab=43.44 E-value=32 Score=29.01 Aligned_cols=27 Identities=19% Similarity=0.274 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHhcCceeeeeccCCC
Q 013839 213 TEEQWREISYQFKVKGHFPFFDMAYQG 239 (435)
Q Consensus 213 ~~~~l~~i~~~~~~~~~~vi~Deay~~ 239 (435)
+.++++++++-|+++|+-||.|-+...
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 579999999999999999999998543
No 422
>PRK07476 eutB threonine dehydratase; Provisional
Probab=43.22 E-value=2.4e+02 Score=26.69 Aligned_cols=51 Identities=16% Similarity=0.043 Sum_probs=32.6
Q ss_pred eeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 118 SAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 118 v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
|+ ..++|+.+..++. ..+.+.=--.|++|...-......++.+|++++.++
T Consensus 70 vv--~aSsGN~g~alA~-~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~ 120 (322)
T PRK07476 70 VV--TASTGNHGRALAY-AARALGIRATICMSRLVPANKVDAIRALGAEVRIVG 120 (322)
T ss_pred EE--EECCChHHHHHHH-HHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEEC
Confidence 55 5677888877663 222222224556665555566678899999998875
No 423
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=42.73 E-value=4.2e+02 Score=27.79 Aligned_cols=97 Identities=10% Similarity=0.035 Sum_probs=52.2
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEe
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLH 201 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~ 201 (435)
+..-||.|-+.+. +..-...+.+.++..-+++...++++.. ++...+.+. ..|+++...-. +....+++
T Consensus 185 LLDEgTAaaEAm~-l~~~~~krkk~vvd~~~hpqtlsV~~TR-a~~~~i~v~-----~~~~~~~~~s~----~~v~gvlv 253 (1001)
T KOG2040|consen 185 LLDEGTAAAEAMA-LCNRINKRKKFVVDSNCHPQTLSVVKTR-AKGFGIKVV-----VSDIKEADYSS----KDVSGVLV 253 (1001)
T ss_pred hhccchhHHHHHH-HHHhhcccceEEecCCCCcchhhhhhcc-ccccceeEE-----ecCHHHhhccc----cceeEEEE
Confidence 3445666655552 2223456678899999999888877631 122222210 01222221111 34556666
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 202 PSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 202 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
--|.. -|.+. +..++++.+++.+..++.
T Consensus 254 QYP~t-~G~i~---d~~el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 254 QYPDT-EGSVL---DFDELVELAHANGSLVVM 281 (1001)
T ss_pred EcCCC-CCccc---CHHHHHHHhhccCceEEE
Confidence 44432 34444 456888899988876654
No 424
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=42.28 E-value=2.5e+02 Score=25.01 Aligned_cols=98 Identities=11% Similarity=-0.012 Sum_probs=57.3
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCEEEEc--CCC------C-----hhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHH
Q 013839 121 VQALSGTGACRLFAEFQRRFHPESHIYFP--DPT------W-----SNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMD 187 (435)
Q Consensus 121 ~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~--~p~------y-----~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 187 (435)
+..+||..+..++. .++-. .+.+.+. .|. | .-....++..|...+.+... ..+.-..+++.+
T Consensus 5 vl~SGGKDS~lAl~--~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~--~~~e~~~~~l~~ 79 (222)
T TIGR00289 5 VLYSGGKDSILALY--KALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTS--GEEEKEVEDLAG 79 (222)
T ss_pred EEecCcHHHHHHHH--HHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcC--CchhHHHHHHHH
Confidence 36789988876663 22222 4433211 111 1 11234556778877666542 112223456666
Q ss_pred HhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceee
Q 013839 188 DIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPF 232 (435)
Q Consensus 188 ~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi 232 (435)
.+.+. +...++ +|.+.+..++..+-++|.+.|+..+
T Consensus 80 ~l~~~--gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 80 QLGEL--DVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHHHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 56532 345555 7999999999999999999987643
No 425
>PRK08638 threonine dehydratase; Validated
Probab=41.65 E-value=1.2e+02 Score=28.81 Aligned_cols=49 Identities=6% Similarity=-0.124 Sum_probs=32.1
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
...+|+.+..++. ..+.+.=.-.|++|+.....-...++.+|++++.++
T Consensus 80 ~~SsGN~g~alA~-~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 80 ACSAGNHAQGVAL-SCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred EeCCcHHHHHHHH-HHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 5777888877663 222333225666666555566678899999998764
No 426
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=41.38 E-value=69 Score=29.89 Aligned_cols=47 Identities=11% Similarity=0.049 Sum_probs=28.9
Q ss_pred ChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeecc
Q 013839 181 DFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 181 d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Dea 236 (435)
-++.+++..+ ...+.+++.+. |. ..++-++|.++|+++|+.++==.+
T Consensus 78 v~~~l~e~~~---~gvk~avI~s~----Gf--~~~~~~~l~~~a~~~girvlGPNc 124 (291)
T PRK05678 78 AADAILEAID---AGIDLIVCITE----GI--PVLDMLEVKAYLERKKTRLIGPNC 124 (291)
T ss_pred HHHHHHHHHH---CCCCEEEEECC----CC--CHHHHHHHHHHHHHcCCEEECCCC
Confidence 4566666665 44444444332 22 245456899999999988875444
No 427
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=40.73 E-value=1.7e+02 Score=27.44 Aligned_cols=56 Identities=16% Similarity=0.099 Sum_probs=32.7
Q ss_pred ccCCCeeeEecCCchhHHHHHHHHHHHhCCC-C-EEEEcCCCChhhHHHHhhCCCCeeeeee
Q 013839 113 VKEGRSAGVQALSGTGACRLFAEFQRRFHPE-S-HIYFPDPTWSNHHNIWRDAQIPERTYHY 172 (435)
Q Consensus 113 ~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g-d-~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 172 (435)
+++...+. =..+|+.++.++ +.+-. .| . .+++|+-.-......++.+|++++.+|.
T Consensus 59 l~pG~tIV-E~TSGNTGI~LA--~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIV-EATSGNTGIALA--MVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEE-EcCCChHHHHHH--HHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 33444433 345555566665 33221 45 3 3334444445667789999999999875
No 428
>PLN02970 serine racemase
Probab=40.64 E-value=1.5e+02 Score=28.14 Aligned_cols=52 Identities=12% Similarity=-0.137 Sum_probs=34.4
Q ss_pred CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 117 RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
.|+ ..++|+.+..++. ..+.+.=--+|++|..+...-...++.+|++++.++
T Consensus 77 ~vv--~aSsGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~ 128 (328)
T PLN02970 77 GVV--THSSGNHAAALAL-AAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCE 128 (328)
T ss_pred eEE--EECCcHHHHHHHH-HHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeC
Confidence 355 5678888877763 222333225677777666666778899999998875
No 429
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=40.48 E-value=2.9e+02 Score=25.30 Aligned_cols=86 Identities=12% Similarity=0.124 Sum_probs=52.0
Q ss_pred CCC-CEEEEcCCCChhh---HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCC-CHH
Q 013839 141 HPE-SHIYFPDPTWSNH---HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDP-TEE 215 (435)
Q Consensus 141 ~~g-d~Vlv~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~-~~~ 215 (435)
..| |.|++++-.+... ...++.+|...+.+-. +. -..+.+++..+.. .-.++++ +-...||.-- -.+
T Consensus 117 ~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~--Pt---T~~eri~~i~~~a--~gFIY~v-S~~GvTG~~~~~~~ 188 (263)
T CHL00200 117 QAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA--PT---SSKSRIQKIARAA--PGCIYLV-STTGVTGLKTELDK 188 (263)
T ss_pred HcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC--CC---CCHHHHHHHHHhC--CCcEEEE-cCCCCCCCCccccH
Confidence 356 9999999666444 3456788888776533 22 2456666655522 1234444 4566788742 135
Q ss_pred HHHHHHHHHHhc-Cceeeee
Q 013839 216 QWREISYQFKVK-GHFPFFD 234 (435)
Q Consensus 216 ~l~~i~~~~~~~-~~~vi~D 234 (435)
+++++++.++++ +.++.+|
T Consensus 189 ~~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 189 KLKKLIETIKKMTNKPIILG 208 (263)
T ss_pred HHHHHHHHHHHhcCCCEEEE
Confidence 678888888875 5666654
No 430
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=40.38 E-value=3.2e+02 Score=25.77 Aligned_cols=147 Identities=11% Similarity=0.050 Sum_probs=78.8
Q ss_pred cccchHHHHHHHHhc-CCC---CCCCCCCcccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCC
Q 013839 67 PVVLQCVREAEAKIA-GSE---FLESISASVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHP 142 (435)
Q Consensus 67 ~~~~~~~~~~~~~~~-~~~---~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~ 142 (435)
+...+.++...+.+. .+. -..|....|.+...+.+++.+.+.. ..+. ++.++..|..++ .+. .
T Consensus 42 paLd~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~~~~------~dvi--v~i~tp~Aq~~~---s~~--~ 108 (322)
T COG2984 42 PALDAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLVGDK------PDVI--VAIATPAAQALV---SAT--K 108 (322)
T ss_pred hhHHHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhhcCC------CcEE--EecCCHHHHHHH---Hhc--C
Confidence 333444444444443 221 3457778899999999999986653 2455 566666664333 211 1
Q ss_pred CCEEEEcC---CCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcC-CCCcEEEEeCCCCCCCCCCCCHHHHH
Q 013839 143 ESHIYFPD---PTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNA-PDSSFFLLHPSAHNPTGVDPTEEQWR 218 (435)
Q Consensus 143 gd~Vlv~~---p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~v~~~~p~NPtG~~~~~~~l~ 218 (435)
+--|++.. |--.....-++.-|.++..+. |. .++++-.++++.- |.-.++-++.+|+-+- +...++
T Consensus 109 ~iPVV~aavtd~v~a~Lv~~~~~pg~NvTGvs--D~----~~v~q~i~lik~~~Pnak~Igv~Y~p~E~n----s~~l~e 178 (322)
T COG2984 109 TIPVVFAAVTDPVGAKLVKSLEQPGGNVTGVS--DL----LPVAQQIELIKALLPNAKSIGVLYNPGEAN----SVSLVE 178 (322)
T ss_pred CCCEEEEccCchhhccCCccccCCCCceeecC--Cc----chHHHHHHHHHHhCCCCeeEEEEeCCCCcc----cHHHHH
Confidence 22233222 221112222334455666552 22 2444444444332 2223443555554433 567889
Q ss_pred HHHHHHHhcCceeeeecc
Q 013839 219 EISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 219 ~i~~~~~~~~~~vi~Dea 236 (435)
++.+.+++.|+-|++=.+
T Consensus 179 elk~~A~~~Gl~vve~~v 196 (322)
T COG2984 179 ELKKEARKAGLEVVEAAV 196 (322)
T ss_pred HHHHHHHHCCCEEEEEec
Confidence 999999999999988554
No 431
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=40.20 E-value=47 Score=25.89 Aligned_cols=50 Identities=16% Similarity=0.104 Sum_probs=39.8
Q ss_pred eEecCC--CHHHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHHHHHHhhhh
Q 013839 372 FCFSGL--TPYQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIHEVTRSEQE 425 (435)
Q Consensus 372 ~~~~~~--~~~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~~~l~~~~~ 425 (435)
|.++|+ +.+++..+.+++||.+. ++-+.. ++|+...++..|+.+++++..
T Consensus 98 FGCiGC~RTNEl~~ylvR~k~iPiL---elkYP~-s~Eea~~~VnkI~~FL~sLe~ 149 (152)
T COG4050 98 FGCIGCARTNELCVYLVRRKGIPIL---ELKYPR-SEEEAIDFVNKIANFLKSLEA 149 (152)
T ss_pred cceecccccchHHHHHhhhcCCceE---EEeCCC-cHHHHHHHHHHHHHHHHhhhh
Confidence 667777 56788888888999886 666655 788888999999999987653
No 432
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=39.66 E-value=1.3e+02 Score=28.12 Aligned_cols=28 Identities=7% Similarity=0.077 Sum_probs=17.1
Q ss_pred CEEEEcCCC-ChhhHHHHhhCCCCeeeee
Q 013839 144 SHIYFPDPT-WSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 144 d~Vlv~~p~-y~~~~~~~~~~g~~~~~v~ 171 (435)
-+|+++... -.....+++.+|++++.++
T Consensus 84 ~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~ 112 (311)
T TIGR01275 84 AVLVLREKEELNGNLLLDKLMGAETRVYS 112 (311)
T ss_pred eEEEecCCccCCCCHHHHHHcCCEEEEEC
Confidence 445555422 1233455689999998775
No 433
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=39.01 E-value=1.3e+02 Score=25.42 Aligned_cols=77 Identities=21% Similarity=0.168 Sum_probs=44.0
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCC-eEE-EEecccccccccCCc
Q 013839 201 HPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEH-LIG-CAQSYAKSMGLYGHR 278 (435)
Q Consensus 201 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i-~~~s~SK~~g~~G~R 278 (435)
.-+..|||= ++-+++-++++-+..-.++|++|+. .....+ .....+......++ .++ .+.=.|++.+..|.|
T Consensus 29 S~S~GNPT~--lsG~elV~lIk~a~~DPV~VMfDD~-G~~g~G---~GE~Al~~v~~h~~IeVLG~iAVASnT~~~~g~~ 102 (180)
T PF14097_consen 29 SQSAGNPTP--LSGEELVELIKQAPHDPVLVMFDDK-GFIGEG---PGEQALEYVANHPDIEVLGAIAVASNTHGAEGTK 102 (180)
T ss_pred eccCCCCCc--CCHHHHHHHHHhCCCCCEEEEEeCC-CCCCCC---ccHHHHHHHHcCCCceEEEEEEEEecCCCCCceE
Confidence 346789995 5667777777777767899999997 222222 12334444433222 221 222346666667777
Q ss_pred ccEEE
Q 013839 279 VGCLS 283 (435)
Q Consensus 279 vG~~~ 283 (435)
+=+-+
T Consensus 103 VD~si 107 (180)
T PF14097_consen 103 VDVSI 107 (180)
T ss_pred eEEEE
Confidence 75543
No 434
>PRK05638 threonine synthase; Validated
Probab=38.83 E-value=2.5e+02 Score=28.00 Aligned_cols=52 Identities=15% Similarity=0.050 Sum_probs=31.4
Q ss_pred CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 117 RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
.|+ ..++|+.+..+++ ..+...=.-.|++|.-.-......++.+|++++.++
T Consensus 114 ~vv--~aSsGN~g~alA~-~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 114 GFI--VASDGNAAASVAA-YSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred EEE--EeCCChHHHHHHH-HHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 455 5677777766663 222222224555655444455667889999998885
No 435
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=38.29 E-value=2.8e+02 Score=24.44 Aligned_cols=91 Identities=14% Similarity=0.198 Sum_probs=54.2
Q ss_pred CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCC-hhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCC
Q 013839 117 RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTW-SNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDS 195 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 195 (435)
.++ ++.||..|..-+ ..++..|.+|.+..|.. +......+..+.+.+. ..++.+++ ..
T Consensus 14 ~Vl--vvGgG~va~rKa---~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~--------~~~~~~~~--------~~ 72 (210)
T COG1648 14 KVL--VVGGGSVALRKA---RLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE--------REFDAEDL--------DD 72 (210)
T ss_pred EEE--EECCCHHHHHHH---HHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh--------cccChhhh--------cC
Confidence 555 788888887655 55678999999999988 3334444443322211 13455554 23
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCcee-eeecc
Q 013839 196 SFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFP-FFDMA 236 (435)
Q Consensus 196 ~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~v-i~Dea 236 (435)
..+++... + +.+.=++|.+.|+++++++ ++|+.
T Consensus 73 ~~lviaAt-~-------d~~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 73 AFLVIAAT-D-------DEELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred ceEEEEeC-C-------CHHHHHHHHHHHHHhCCceeccCCc
Confidence 34555422 2 2344578999999988664 34444
No 436
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=38.28 E-value=1.9e+02 Score=26.84 Aligned_cols=53 Identities=13% Similarity=0.026 Sum_probs=31.6
Q ss_pred CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeee
Q 013839 117 RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHY 172 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 172 (435)
.|+ ...+|+.+..++. ..+.+.=.-.|+++.-....-...++.+|++++.++-
T Consensus 67 ~iv--~~ssGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 67 GVV--AASAGNHAQGVAY-AAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred cEE--EECCCHHHHHHHH-HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 355 5667777766663 2222222244555554444556778899999888864
No 437
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=37.87 E-value=2.6e+02 Score=26.35 Aligned_cols=94 Identities=12% Similarity=-0.023 Sum_probs=46.7
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEe
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLH 201 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~ 201 (435)
...+|+.+..++. ..+.+.=--.|+++...-......++.+|++++.++- . +.-+...+.+.+.+. .+..+++
T Consensus 56 ~aSsGN~g~alA~-~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~--~--~~~~~~~~~~~l~~~--~~~~~~~ 128 (316)
T cd06448 56 CSSGGNAGLAAAY-AARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGK--V--WWEADNYLREELAEN--DPGPVYV 128 (316)
T ss_pred EeCCcHHHHHHHH-HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--c--hHHHHHHHHHHHHhc--cCCcEEe
Confidence 4556777776662 1222222245555554445556788899999988753 1 111223334444422 1123444
Q ss_pred CCCCCCCCCCCCHHHHHHHHH
Q 013839 202 PSAHNPTGVDPTEEQWREISY 222 (435)
Q Consensus 202 ~~p~NPtG~~~~~~~l~~i~~ 222 (435)
+..+||.+.-....--.||.+
T Consensus 129 ~~~~n~~~~~g~~t~~~Ei~~ 149 (316)
T cd06448 129 HPFDDPLIWEGHSSMVDEIAQ 149 (316)
T ss_pred CCCCCchhhccccHHHHHHHH
Confidence 444566654443333344444
No 438
>PLN02955 8-amino-7-oxononanoate synthase
Probab=37.86 E-value=4.4e+02 Score=26.59 Aligned_cols=153 Identities=9% Similarity=0.073 Sum_probs=77.7
Q ss_pred CCCCCCcccHHHHHHHHHhH--cCCCCccccCCCeeeEecCCchhHHHHH-HH-HHHHhCCCCEEEEcCCCChhhHHHHh
Q 013839 86 LESISASVSTKMVEESVKLV--YGKDSDVVKEGRSAGVQALSGTGACRLF-AE-FQRRFHPESHIYFPDPTWSNHHNIWR 161 (435)
Q Consensus 86 ~~Y~~~~g~~~lr~~ia~~l--~~~~~~~~~~~~v~~~~t~gg~~a~~~~-~~-~~~~~~~gd~Vlv~~p~y~~~~~~~~ 161 (435)
..|-.....|+++++..+.+ +|.... +....+|+...+.- -. +..+++. +..++..-+|.....++.
T Consensus 110 ndYLGL~~~p~v~~a~~~ai~~yG~g~~--------gSrl~~G~~~~h~~LE~~LA~f~g~-e~all~sSGy~AN~~~i~ 180 (476)
T PLN02955 110 NDYLGLSSHPTISNAAANAAKEYGMGPK--------GSALICGYTTYHRLLESSLADLKKK-EDCLVCPTGFAANMAAMV 180 (476)
T ss_pred cCccCCCCCHHHHHHHHHHHHHcCCCCC--------CcCccccChHHHHHHHHHHHHHHCC-CcEEEECChHHHHHHHHH
Confidence 35888788899999999887 332211 11233444233222 22 4444443 555556667766555554
Q ss_pred hC---------------CCC-eeeeeecCCCCCCcChHhHHHHhhcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 013839 162 DA---------------QIP-ERTYHYYDPDSKSLDFAALMDDIKNAPD--SSFFLLHPSAHNPTGVDPTEEQWREISYQ 223 (435)
Q Consensus 162 ~~---------------g~~-~~~v~~~~~~~~~~d~e~l~~~i~~~~~--~~~~v~~~~p~NPtG~~~~~~~l~~i~~~ 223 (435)
.. +-+ ++.+ |+ ..-..|..-+.-.+. ....+. -+|| +.++++++.+-
T Consensus 181 aL~~~~~~~~~~~~~~~~~~d~i~~---D~----~~HaSI~dG~~ls~~~~~a~~~~--f~HN------D~~~Le~~L~~ 245 (476)
T PLN02955 181 AIGSVASLLAASGKPLKNEKVAIFS---DA----LNHASIIDGVRLAERQGNVEVFV--YRHC------DMYHLNSLLSS 245 (476)
T ss_pred HHhhccccccccccccCCCCcEEEE---ec----cchHHHHHHHHhccccCCceEEE--eCCC------CHHHHHHHHHh
Confidence 32 111 1222 22 122344444431111 123333 3355 45777777776
Q ss_pred HHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEE
Q 013839 224 FKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCA 265 (435)
Q Consensus 224 ~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 265 (435)
+++...+||.|.+|..-+.- .+...+..+....+-.+++
T Consensus 246 ~~~~~~~Vv~EgV~SmdGdi---apL~eL~~L~~~~ga~LiV 284 (476)
T PLN02955 246 CKMKRKVVVTDSLFSMDGDF---APMEELSQLRKKYGFLLVI 284 (476)
T ss_pred CCCCceEEEEeCCCCCCCCc---CCHHHHHHHHHHcCcEEEE
Confidence 66667899999997654432 2344555554444444444
No 439
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=37.52 E-value=56 Score=33.58 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=29.0
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccC
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFAS 242 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~ 242 (435)
.+...+.++++++++.|+++|+-||.|-+|.....
T Consensus 153 ~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~ 187 (542)
T TIGR02402 153 HNAYGGPDDLKALVDAAHGLGLGVILDVVYNHFGP 187 (542)
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEEccCCCCC
Confidence 33444689999999999999999999999876543
No 440
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=36.74 E-value=3.1e+02 Score=24.46 Aligned_cols=97 Identities=13% Similarity=0.065 Sum_probs=58.5
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEE----cCC--CCh-------hhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHH
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYF----PDP--TWS-------NHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDD 188 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv----~~p--~y~-------~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 188 (435)
..+||..+..++. .+.-. -+.+.+ +.. +|. -....++..|..++.++.. ....--.+++.+.
T Consensus 6 l~SGGKDS~~al~--~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~--~~~e~~~e~l~~~ 80 (223)
T TIGR00290 6 LISGGKDSCLALY--HALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTE--GTEEDEVEELKGI 80 (223)
T ss_pred EecCcHHHHHHHH--HHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecC--CCccHHHHHHHHH
Confidence 6889998877773 33323 333321 221 221 1123455778877665542 1122345677777
Q ss_pred hhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceee
Q 013839 189 IKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPF 232 (435)
Q Consensus 189 i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi 232 (435)
+.+. +...++ +|.+.+..++..+-++|.+.|+..+
T Consensus 81 l~~~--gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 81 LHTL--DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHc--CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 7643 344555 7999999999999999999987643
No 441
>PRK08329 threonine synthase; Validated
Probab=36.65 E-value=2.4e+02 Score=27.08 Aligned_cols=52 Identities=10% Similarity=0.022 Sum_probs=31.8
Q ss_pred CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 117 RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
.|+ ..++|+.+..++. ..+...=.-.|++|...-..-...++.+|++++.++
T Consensus 106 ~vv--~aSsGN~g~alA~-~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~ 157 (347)
T PRK08329 106 EVV--IDSSGNAALSLAL-YSLSEGIKVHVFVSYNASKEKISLLSRLGAELHFVE 157 (347)
T ss_pred EEE--EECCCcHHHHHHH-HHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEEC
Confidence 455 5667787776663 222222224556665444455667889999998885
No 442
>PRK06815 hypothetical protein; Provisional
Probab=36.52 E-value=1.9e+02 Score=27.24 Aligned_cols=50 Identities=16% Similarity=0.075 Sum_probs=32.4
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeee
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHY 172 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 172 (435)
..++|+.+..++. ..+.+.=.-+|++|...-..-...++.+|++++.++-
T Consensus 73 ~aSsGN~g~alA~-~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (317)
T PRK06815 73 TASSGNHGQGVAL-AAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGG 122 (317)
T ss_pred EECCChHHHHHHH-HHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 5677777776663 2223332356667665545567788899999998863
No 443
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=35.64 E-value=2.4e+02 Score=26.54 Aligned_cols=52 Identities=13% Similarity=0.045 Sum_probs=32.3
Q ss_pred CeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 117 RSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 117 ~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
.|+ ...+|+.+..++. ..+.+.-.-+|++|...-......++.+|++++.++
T Consensus 72 ~vv--~~SsGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~ 123 (324)
T cd01563 72 AVA--CASTGNTSASLAA-YAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVE 123 (324)
T ss_pred EEE--EeCCCHHHHHHHH-HHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEEC
Confidence 455 5668888877663 222333235566665553445667889999998875
No 444
>PRK08246 threonine dehydratase; Provisional
Probab=35.43 E-value=3.8e+02 Score=25.14 Aligned_cols=73 Identities=10% Similarity=-0.009 Sum_probs=44.5
Q ss_pred cccHHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 92 SVSTKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
.|....|-++........ ....|+ ...+|+.+..++. ..+.+.-.-+|++|...-......++.+|++++.++
T Consensus 49 tGS~K~R~a~~~~~~~~~----~~~~vv--~aSsGN~g~a~A~-~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 121 (310)
T PRK08246 49 TGSFKARGAFNRLLAAPV----PAAGVV--AASGGNAGLAVAY-AAAALGVPATVFVPETAPPAKVARLRALGAEVVVVG 121 (310)
T ss_pred CCCCHHHHHHHHHHhhcc----cCCeEE--EeCCCHHHHHHHH-HHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeC
Confidence 455566766655442221 123455 6778888877763 222333335677776655556678899999988774
No 445
>PLN02591 tryptophan synthase
Probab=34.79 E-value=3.5e+02 Score=24.57 Aligned_cols=85 Identities=12% Similarity=0.030 Sum_probs=50.3
Q ss_pred CCC-CEEEEcCCCChhh---HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCC-HH
Q 013839 141 HPE-SHIYFPDPTWSNH---HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPT-EE 215 (435)
Q Consensus 141 ~~g-d~Vlv~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~-~~ 215 (435)
+.| |-|++|+-.+... ...++.+|...+.+-. +. .+.+.+++.... ....+.+.+-...||..-. .+
T Consensus 104 ~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~--Pt---t~~~ri~~ia~~---~~gFIY~Vs~~GvTG~~~~~~~ 175 (250)
T PLN02591 104 EAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTT--PT---TPTERMKAIAEA---SEGFVYLVSSTGVTGARASVSG 175 (250)
T ss_pred HcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC--CC---CCHHHHHHHHHh---CCCcEEEeeCCCCcCCCcCCch
Confidence 455 9999999776433 4456678877766532 21 234556555542 2233334344566776432 56
Q ss_pred HHHHHHHHHHhc-Cceeee
Q 013839 216 QWREISYQFKVK-GHFPFF 233 (435)
Q Consensus 216 ~l~~i~~~~~~~-~~~vi~ 233 (435)
+++++++.++++ ++++++
T Consensus 176 ~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 176 RVESLLQELKEVTDKPVAV 194 (250)
T ss_pred hHHHHHHHHHhcCCCceEE
Confidence 688888888875 555554
No 446
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=34.76 E-value=3.3e+02 Score=24.18 Aligned_cols=28 Identities=7% Similarity=0.032 Sum_probs=13.1
Q ss_pred HHHhhCCCCeeeeeecCCCCCCcChHhHHHHhh
Q 013839 158 NIWRDAQIPERTYHYYDPDSKSLDFAALMDDIK 190 (435)
Q Consensus 158 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~ 190 (435)
..++..|.+. .+-++ +. -.++.++..+.
T Consensus 100 ~~ik~~g~k~-Glaln-P~---Tp~~~i~~~l~ 127 (220)
T PRK08883 100 QLIKEHGCQA-GVVLN-PA---TPLHHLEYIMD 127 (220)
T ss_pred HHHHHcCCcE-EEEeC-CC---CCHHHHHHHHH
Confidence 3455666654 22231 21 24556665554
No 447
>PF12427 DUF3665: Branched-chain amino acid aminotransferase ; InterPro: IPR024614 This uncharacterised domain is found in the N-terminal region of branched-chain amino acid aminotransferase II proteins in Corynebacterium. It is typically between 23 and 35 amino acids in length and contains a conserved TRT sequence motif.
Probab=34.73 E-value=59 Score=17.02 Aligned_cols=17 Identities=35% Similarity=0.515 Sum_probs=11.7
Q ss_pred eCCCCCCCCCCCCHHHHHHHH
Q 013839 201 HPSAHNPTGVDPTEEQWREIS 221 (435)
Q Consensus 201 ~~~p~NPtG~~~~~~~l~~i~ 221 (435)
+..-+||| +++++++|.
T Consensus 6 iTRT~nPT----s~~~L~eIL 22 (23)
T PF12427_consen 6 ITRTENPT----SPERLKEIL 22 (23)
T ss_pred EeccCCCC----CHHHHHHHh
Confidence 44568888 467777764
No 448
>COG1204 Superfamily II helicase [General function prediction only]
Probab=33.44 E-value=2.7e+02 Score=30.10 Aligned_cols=70 Identities=14% Similarity=0.047 Sum_probs=40.1
Q ss_pred HHHHHHHHHhHcCCCCccccCCCeeeEecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHH------HHhhCCCCee
Q 013839 95 TKMVEESVKLVYGKDSDVVKEGRSAGVQALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHN------IWRDAQIPER 168 (435)
Q Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~------~~~~~g~~~~ 168 (435)
+..++++-+.++. + +|=++...|.+|...+..++.+..+...|.+++...|.-.-..+ .++.+|.++.
T Consensus 34 ~~qq~av~~~~~~-~-----~N~li~aPTgsGKTlIA~lai~~~l~~~~~k~vYivPlkALa~Ek~~~~~~~~~~GirV~ 107 (766)
T COG1204 34 NPQQEAVEKGLLS-D-----ENVLISAPTGSGKTLIALLAILSTLLEGGGKVVYIVPLKALAEEKYEEFSRLEELGIRVG 107 (766)
T ss_pred HHHHHHhhccccC-C-----CcEEEEcCCCCchHHHHHHHHHHHHHhcCCcEEEEeChHHHHHHHHHHhhhHHhcCCEEE
Confidence 4455555555544 1 34455556888887776665455454445777777776433322 2346777776
Q ss_pred ee
Q 013839 169 TY 170 (435)
Q Consensus 169 ~v 170 (435)
.+
T Consensus 108 ~~ 109 (766)
T COG1204 108 IS 109 (766)
T ss_pred Ee
Confidence 55
No 449
>COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism]
Probab=33.37 E-value=77 Score=30.63 Aligned_cols=41 Identities=22% Similarity=0.168 Sum_probs=34.0
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeecc
Q 013839 196 SFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 196 ~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Dea 236 (435)
.+.+++...+.||-..-..++.+.+.++|+++|+..+.|.-
T Consensus 57 ~k~~~~~DH~vPt~~~~~a~~~~~lr~~~ke~Gi~~~~~~g 97 (423)
T COG0065 57 EKTVATFDHNVPTPDIKAAEQQKELRENAKEFGIVNFYDVG 97 (423)
T ss_pred cceEEEecCCCCCccHHHHHHHHHHHHHHHHhCCeeeecCC
Confidence 35666667788998888889999999999999988877654
No 450
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=33.10 E-value=2.3e+02 Score=23.24 Aligned_cols=73 Identities=10% Similarity=0.004 Sum_probs=40.9
Q ss_pred hhHHHHhhC-CCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 155 NHHNIWRDA-QIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 155 ~~~~~~~~~-g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
+....++.. |.++..+ .. +..++ + .++.+.+.+ .+..+|+ +.| .|+|......+-..|.+.|-+|+++++.
T Consensus 40 gTa~~L~~~~Gi~v~~v-i~-~~~gg-~-~~i~~~I~~--g~i~lVI-nt~-dp~~~~~~~~D~~~IRR~Av~~~IP~~T 111 (142)
T PRK05234 40 TTGGLIQEATGLDVTRL-LS-GPLGG-D-QQIGALIAE--GKIDMLI-FFR-DPLTAQPHDPDVKALLRLADVWNIPVAT 111 (142)
T ss_pred hHHHHHHhccCCeeEEE-Ec-CCCCC-c-hhHHHHHHc--CceeEEE-Eec-CCCCCCcccchHHHHHHHHHHcCCCEEc
Confidence 344556666 7776666 32 22112 2 456666763 3344444 222 1234433245677999999999998876
Q ss_pred ec
Q 013839 234 DM 235 (435)
Q Consensus 234 De 235 (435)
.-
T Consensus 112 ~l 113 (142)
T PRK05234 112 NR 113 (142)
T ss_pred CH
Confidence 54
No 451
>PLN02960 alpha-amylase
Probab=32.82 E-value=68 Score=34.68 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=31.9
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCC
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASG 243 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~ 243 (435)
|++...++++++++++.|+++|+-||.|-+|..+..+
T Consensus 458 ~~~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d 494 (897)
T PLN02960 458 VSSRFGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 494 (897)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEecccccCCc
Confidence 4455668899999999999999999999999877754
No 452
>PRK07048 serine/threonine dehydratase; Validated
Probab=32.80 E-value=2.1e+02 Score=27.00 Aligned_cols=49 Identities=18% Similarity=0.044 Sum_probs=31.7
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
...+|+.+..++. ..+.+.=--.|++|...-..-...++.+|++++.++
T Consensus 77 ~aSsGN~g~alA~-~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~ 125 (321)
T PRK07048 77 TFSSGNHAQAIAL-SARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYD 125 (321)
T ss_pred EeCCCHHHHHHHH-HHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEEC
Confidence 4667788776663 222333224666776555556677889999998886
No 453
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=32.80 E-value=1.5e+02 Score=24.29 Aligned_cols=55 Identities=18% Similarity=0.131 Sum_probs=39.1
Q ss_pred cChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHh-cCce-eeeecc
Q 013839 180 LDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEE-QWREISYQFKV-KGHF-PFFDMA 236 (435)
Q Consensus 180 ~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~-~l~~i~~~~~~-~~~~-vi~Dea 236 (435)
.+++.|.+.+.+. .+..+++.-|.|..|...+.. ..+++++..++ .++. ++.||-
T Consensus 40 ~~~~~l~~li~~~--~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 40 QDFNALLKLVKEY--QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred hhHHHHHHHHHHh--CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 5899999998864 567888999999999887744 24555555443 4544 556765
No 454
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=32.78 E-value=2e+02 Score=25.11 Aligned_cols=107 Identities=13% Similarity=0.029 Sum_probs=47.7
Q ss_pred CEEEEcCCCCh---hhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHH-
Q 013839 144 SHIYFPDPTWS---NHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWRE- 219 (435)
Q Consensus 144 d~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~- 219 (435)
|.|.+.--+.. .....++..|.++ .+-++ +. -.++.++..+.. -....+...+|. -.|..+.++-+++
T Consensus 82 ~~i~~H~E~~~~~~~~i~~ik~~g~k~-Gialn-P~---T~~~~~~~~l~~--vD~VlvMsV~PG-~~Gq~f~~~~~~KI 153 (201)
T PF00834_consen 82 DYITFHAEATEDPKETIKYIKEAGIKA-GIALN-PE---TPVEELEPYLDQ--VDMVLVMSVEPG-FGGQKFIPEVLEKI 153 (201)
T ss_dssp SEEEEEGGGTTTHHHHHHHHHHTTSEE-EEEE--TT---S-GGGGTTTGCC--SSEEEEESS-TT-TSSB--HGGHHHHH
T ss_pred CEEEEcccchhCHHHHHHHHHHhCCCE-EEEEE-CC---CCchHHHHHhhh--cCEEEEEEecCC-CCcccccHHHHHHH
Confidence 55554432222 2234455666654 33332 22 245666655541 112222222332 2566665555555
Q ss_pred --HHHHHHh--cCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecc
Q 013839 220 --ISYQFKV--KGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSY 268 (435)
Q Consensus 220 --i~~~~~~--~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 268 (435)
+.++..+ +++.+.+|.- ...+ .+..+.+.+-++++++|.
T Consensus 154 ~~l~~~~~~~~~~~~I~vDGG---I~~~-------~~~~~~~aGad~~V~Gs~ 196 (201)
T PF00834_consen 154 RELRKLIPENGLDFEIEVDGG---INEE-------NIKQLVEAGADIFVAGSA 196 (201)
T ss_dssp HHHHHHHHHHTCGSEEEEESS---ESTT-------THHHHHHHT--EEEESHH
T ss_pred HHHHHHHHhcCCceEEEEECC---CCHH-------HHHHHHHcCCCEEEECHH
Confidence 4444555 4577888854 2221 334444556678887763
No 455
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed
Probab=32.72 E-value=1.3e+02 Score=27.46 Aligned_cols=52 Identities=12% Similarity=0.004 Sum_probs=37.1
Q ss_pred CCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeecc
Q 013839 176 DSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 176 ~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Dea 236 (435)
.+|-+++.++..+.. -...++.+. +..++.++++++++.|++.|+-+++|-.
T Consensus 117 kdfi~~~~qi~~a~~---~GAD~VlLi------~~~l~~~~l~~li~~a~~lGl~~lvevh 168 (260)
T PRK00278 117 KDFIIDPYQIYEARA---AGADAILLI------VAALDDEQLKELLDYAHSLGLDVLVEVH 168 (260)
T ss_pred eeecCCHHHHHHHHH---cCCCEEEEE------eccCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 457788888877766 344455542 2234567899999999999999888843
No 456
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=32.37 E-value=3.1e+02 Score=23.20 Aligned_cols=86 Identities=8% Similarity=0.065 Sum_probs=51.9
Q ss_pred HHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCC-CCCCCCCCCCHH
Q 013839 137 QRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPS-AHNPTGVDPTEE 215 (435)
Q Consensus 137 ~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~-p~NPtG~~~~~~ 215 (435)
..+-..+.-++...|-+..+...+...|.+...+-.-....-.-++...|++++ ......|+.- |+ .++.+
T Consensus 54 ~~Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLr---SG~c~aVL~WLp~-----~l~~~ 125 (168)
T TIGR00623 54 QQLGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALR---TGNYSVVIGWLTD-----ELTEE 125 (168)
T ss_pred HHhcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHH---hCCCcEEEecCCc-----cCCHH
Confidence 333345666776777777888899999997655422111111224577888887 3333334433 32 25678
Q ss_pred HHHHHHHHHHhcCce
Q 013839 216 QWREISYQFKVKGHF 230 (435)
Q Consensus 216 ~l~~i~~~~~~~~~~ 230 (435)
++++|--.|+..+.+
T Consensus 126 ~lRRLqlAA~~G~al 140 (168)
T TIGR00623 126 EHAKLVRAAEEGNAM 140 (168)
T ss_pred HHHHHHHHHHhCCCe
Confidence 888887777776554
No 457
>PRK09354 recA recombinase A; Provisional
Probab=31.93 E-value=3.9e+02 Score=25.72 Aligned_cols=29 Identities=7% Similarity=-0.026 Sum_probs=16.2
Q ss_pred CCCCEEEEcCCCChhhHHHHhhCCCCeee
Q 013839 141 HPESHIYFPDPTWSNHHNIWRDAQIPERT 169 (435)
Q Consensus 141 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 169 (435)
..|..++..+.-.......++..|.++..
T Consensus 86 ~~G~~~~yId~E~s~~~~~a~~lGvdld~ 114 (349)
T PRK09354 86 KAGGTAAFIDAEHALDPVYAKKLGVDIDN 114 (349)
T ss_pred HcCCcEEEECCccchHHHHHHHcCCCHHH
Confidence 45666665554444444566666765433
No 458
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=31.92 E-value=3.4e+02 Score=25.74 Aligned_cols=44 Identities=14% Similarity=0.116 Sum_probs=27.9
Q ss_pred CCCH-HHHHHHhhhccEEEeCCCcEEeccCCCCcHHHHHHHHHHHHHh
Q 013839 376 GLTP-YQVDRLAKEFHIYMTQDGRISMAGVTTGNVNYLANAIHEVTRS 422 (435)
Q Consensus 376 ~~~~-~~~~~ll~~~gI~i~pggRis~~~~~~e~i~~~~~~l~~~l~~ 422 (435)
|++. ..+..+..+.||.-.+|+.+++ ..+.+.+.-+..++.+++
T Consensus 263 Gi~~~~~~~~~a~~~g~i~k~g~w~~~---~~~~~~qg~~~~~~~l~~ 307 (321)
T TIGR02012 263 GISKLGEIIDLAVELDIIKKAGSWYSY---GDEKLGQGRENAKAYLKE 307 (321)
T ss_pred ccchhhHHHHHHHhCCcEEcccCEEEE---CCcEecccHHHHHHHHHh
Confidence 5543 2344445568999988887777 345566666666666643
No 459
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=31.33 E-value=2.8e+02 Score=25.97 Aligned_cols=17 Identities=12% Similarity=-0.169 Sum_probs=13.2
Q ss_pred hHHHHhhCCCCeeeeee
Q 013839 156 HHNIWRDAQIPERTYHY 172 (435)
Q Consensus 156 ~~~~~~~~g~~~~~v~~ 172 (435)
....++.+|++++.++-
T Consensus 100 ~~~~~~~~Ga~v~~~~~ 116 (307)
T cd06449 100 NILLSRIMGADVRLVSA 116 (307)
T ss_pred cHHHHHHCCCEEEEECC
Confidence 45667899999988864
No 460
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=30.90 E-value=1.2e+02 Score=27.75 Aligned_cols=84 Identities=13% Similarity=0.116 Sum_probs=51.5
Q ss_pred CCCEEEEcCCCChh--h-HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 013839 142 PESHIYFPDPTWSN--H-HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWR 218 (435)
Q Consensus 142 ~gd~Vlv~~p~y~~--~-~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~ 218 (435)
=||++|.-.---.+ | .+.+...|.++..+.+- .+ |+++|.+.++....+..+++++-.=-||-..+|.+
T Consensus 9 vG~ElL~G~ivdtNa~~la~~L~~~G~~v~~~~~V-gD----~~~~I~~~l~~a~~r~D~vI~tGGLGPT~DDiT~e--- 80 (255)
T COG1058 9 VGDELLSGRIVDTNAAFLADELTELGVDLARITTV-GD----NPDRIVEALREASERADVVITTGGLGPTHDDLTAE--- 80 (255)
T ss_pred EccceecCceecchHHHHHHHHHhcCceEEEEEec-CC----CHHHHHHHHHHHHhCCCEEEECCCcCCCccHhHHH---
Confidence 35666654432222 2 34566789988887653 33 67888888776555688888877777776666554
Q ss_pred HHHHHHHhcCceeeeecc
Q 013839 219 EISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 219 ~i~~~~~~~~~~vi~Dea 236 (435)
.+ |+-.|..++.|+-
T Consensus 81 ~v---Aka~g~~lv~~~~ 95 (255)
T COG1058 81 AV---AKALGRPLVLDEE 95 (255)
T ss_pred HH---HHHhCCCcccCHH
Confidence 33 3444555555543
No 461
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=30.78 E-value=72 Score=34.05 Aligned_cols=35 Identities=11% Similarity=0.047 Sum_probs=29.5
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccC
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFAS 242 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~ 242 (435)
+....++++++++++.|+++|+-||.|-++..+..
T Consensus 293 ~~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~ 327 (758)
T PLN02447 293 SSRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASK 327 (758)
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEeccccccc
Confidence 33445789999999999999999999999876654
No 462
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=30.69 E-value=4.4e+02 Score=24.39 Aligned_cols=72 Identities=14% Similarity=0.154 Sum_probs=49.3
Q ss_pred ChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCC
Q 013839 181 DFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEH 260 (435)
Q Consensus 181 d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 260 (435)
+++++++++. -.+.+|.+. | ++++++++.++++...+-.+++ +-... ....+..+...+.
T Consensus 197 sle~~~eAl~---agaDiImLD---N-----m~~e~~~~av~~l~~~~~~~lE--aSGgI-------t~~ni~~yA~tGV 256 (280)
T COG0157 197 SLEEAEEALE---AGADIIMLD---N-----MSPEELKEAVKLLGLAGRALLE--ASGGI-------TLENIREYAETGV 256 (280)
T ss_pred CHHHHHHHHH---cCCCEEEec---C-----CCHHHHHHHHHHhccCCceEEE--EeCCC-------CHHHHHHHhhcCC
Confidence 6889999998 567788883 3 6789999999987544433332 21222 2346777777778
Q ss_pred eEEEEecccccc
Q 013839 261 LIGCAQSYAKSM 272 (435)
Q Consensus 261 ~~i~~~s~SK~~ 272 (435)
++|.++.+.+..
T Consensus 257 D~IS~galths~ 268 (280)
T COG0157 257 DVISVGALTHSA 268 (280)
T ss_pred CEEEeCccccCC
Confidence 889888776653
No 463
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=30.44 E-value=1.3e+02 Score=24.11 Aligned_cols=56 Identities=16% Similarity=0.106 Sum_probs=32.4
Q ss_pred hhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHH
Q 013839 155 NHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEE 215 (435)
Q Consensus 155 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~ 215 (435)
.....++..|.++..+..- .+ |.+.+.+.+.+.-....+++++--.-++-..++++
T Consensus 23 ~l~~~l~~~G~~v~~~~~v-~D----d~~~i~~~i~~~~~~~DlvittGG~g~g~~D~t~~ 78 (133)
T cd00758 23 ALEALLEDLGCEVIYAGVV-PD----DADSIRAALIEASREADLVLTTGGTGVGRRDVTPE 78 (133)
T ss_pred HHHHHHHHCCCEEEEeeec-CC----CHHHHHHHHHHHHhcCCEEEECCCCCCCCCcchHH
Confidence 3455677889888776552 33 56777777654323356777754444444444443
No 464
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=30.40 E-value=2.6e+02 Score=28.33 Aligned_cols=68 Identities=10% Similarity=-0.023 Sum_probs=39.5
Q ss_pred HHhhCC-CCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--Cceeeeec
Q 013839 159 IWRDAQ-IPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVK--GHFPFFDM 235 (435)
Q Consensus 159 ~~~~~g-~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~vi~De 235 (435)
.++..| .++..++. ....++.+++.+.+.+. ++.+|.++. ...+.....++++.+++. ++.||+=.
T Consensus 31 ~L~~~G~~~V~iiD~---~~~~~~~~~~~~~l~~~--~pdvVgis~------~t~~~~~a~~~~~~~k~~~P~~~iV~GG 99 (497)
T TIGR02026 31 ALLDAGYHDVTFLDA---MTGPLTDEKLVERLRAH--CPDLVLITA------ITPAIYIACETLKFARERLPNAIIVLGG 99 (497)
T ss_pred HHHhcCCcceEEecc---cccCCCHHHHHHHHHhc--CcCEEEEec------CcccHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 355677 56666643 22346677777777643 345555522 223445566778877775 77777655
Q ss_pred cC
Q 013839 236 AY 237 (435)
Q Consensus 236 ay 237 (435)
.+
T Consensus 100 ~h 101 (497)
T TIGR02026 100 IH 101 (497)
T ss_pred CC
Confidence 43
No 465
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=30.18 E-value=40 Score=31.18 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHHHhcCceeeeeccCCCccCC
Q 013839 212 PTEEQWREISYQFKVKGHFPFFDMAYQGFASG 243 (435)
Q Consensus 212 ~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~~ 243 (435)
.+.++++++++.|+++|+-||.|-++...+..
T Consensus 49 Gt~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~ 80 (316)
T PF00128_consen 49 GTMEDFKELVDAAHKRGIKVILDVVPNHTSDD 80 (316)
T ss_dssp BHHHHHHHHHHHHHHTTCEEEEEEETSEEETT
T ss_pred chhhhhhhhhhccccccceEEEeeeccccccc
Confidence 35899999999999999999999998665543
No 466
>PLN02460 indole-3-glycerol-phosphate synthase
Probab=30.15 E-value=69 Score=30.48 Aligned_cols=79 Identities=5% Similarity=-0.083 Sum_probs=50.7
Q ss_pred EEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 013839 145 HIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQF 224 (435)
Q Consensus 145 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~ 224 (435)
.|++....|.+....++......+.+|+. -.+|-+|.-++.++-. -...+|++. -.+++.++++++.++|
T Consensus 157 SVLTd~~~F~Gs~e~L~~vr~~~v~lPvL-rKDFIID~yQI~eAr~---~GADAVLLI------aaiL~~~~L~~l~~~A 226 (338)
T PLN02460 157 SVLTDEKYFQGSFENLEAIRNAGVKCPLL-CKEFIVDAWQIYYARS---KGADAILLI------AAVLPDLDIKYMLKIC 226 (338)
T ss_pred EEecCcCcCCCCHHHHHHHHHcCCCCCEe-eccccCCHHHHHHHHH---cCCCcHHHH------HHhCCHHHHHHHHHHH
Confidence 35555555655555444322111345653 4468899988887755 344555542 2567888999999999
Q ss_pred HhcCceeee
Q 013839 225 KVKGHFPFF 233 (435)
Q Consensus 225 ~~~~~~vi~ 233 (435)
++.|+-+++
T Consensus 227 ~~LGme~LV 235 (338)
T PLN02460 227 KSLGMAALI 235 (338)
T ss_pred HHcCCeEEE
Confidence 999987776
No 467
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=30.06 E-value=1.3e+02 Score=27.93 Aligned_cols=47 Identities=6% Similarity=-0.013 Sum_probs=28.2
Q ss_pred ChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeecc
Q 013839 181 DFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 181 d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Dea 236 (435)
-++.+++... ...+.+++.+.. ++..+-++|.+.|+++|+.++==.+
T Consensus 76 v~~~l~e~~~---~Gvk~avIis~G------f~e~~~~~l~~~a~~~girilGPNc 122 (286)
T TIGR01019 76 AADAIFEAID---AGIELIVCITEG------IPVHDMLKVKRYMEESGTRLIGPNC 122 (286)
T ss_pred HHHHHHHHHH---CCCCEEEEECCC------CCHHHHHHHHHHHHHcCCEEECCCC
Confidence 3556666665 444444443322 2333457899999999988775444
No 468
>PRK12313 glycogen branching enzyme; Provisional
Probab=30.01 E-value=87 Score=32.92 Aligned_cols=34 Identities=15% Similarity=0.066 Sum_probs=28.9
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeeeeccCCCccC
Q 013839 209 GVDPTEEQWREISYQFKVKGHFPFFDMAYQGFAS 242 (435)
Q Consensus 209 G~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~ 242 (435)
....+.++++++++.|+++|+-||.|-++..+..
T Consensus 214 ~~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~ 247 (633)
T PRK12313 214 SRYGTPEDFMYLVDALHQNGIGVILDWVPGHFPK 247 (633)
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Confidence 3455789999999999999999999999876653
No 469
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=29.97 E-value=2.8e+02 Score=25.11 Aligned_cols=136 Identities=10% Similarity=0.110 Sum_probs=71.7
Q ss_pred HHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCC-CCCCCCCHH
Q 013839 137 QRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHN-PTGVDPTEE 215 (435)
Q Consensus 137 ~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~N-PtG~~~~~~ 215 (435)
..+++.|-.|+..+-.- ....-+...|++. --+++++.+.+. .++.|++.-|+- ||. +
T Consensus 17 ~rl~~~ghdvV~yD~n~-~av~~~~~~ga~~-----------a~sl~el~~~L~----~pr~vWlMvPag~it~-----~ 75 (300)
T COG1023 17 RRLLDGGHDVVGYDVNQ-TAVEELKDEGATG-----------AASLDELVAKLS----APRIVWLMVPAGDITD-----A 75 (300)
T ss_pred HHHHhCCCeEEEEcCCH-HHHHHHHhcCCcc-----------ccCHHHHHHhcC----CCcEEEEEccCCCchH-----H
Confidence 45666776666555321 2222333344221 124567766664 346666655544 664 4
Q ss_pred HHHHHHHHHHhcCceeeeeccCCCccCCCCcccHHHHHHhhhcCCeEEEEecccccccccCCcccEEEEEecChhHHHHH
Q 013839 216 QWREISYQFKVKGHFPFFDMAYQGFASGDLDKDAQAIRIFLEDEHLIGCAQSYAKSMGLYGHRVGCLSILCVDSKQAAAI 295 (435)
Q Consensus 216 ~l~~i~~~~~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RvG~~~~~~~~~~~~~~~ 295 (435)
-++.+..+..+-+ +|+|.=-+.+. + ...-...+...+-+.+-+++.. |+.|.+-||...+..+.+.++.+
T Consensus 76 vi~~la~~L~~GD--ivIDGGNS~y~--D---s~rr~~~l~~kgi~flD~GTSG---G~~G~~~G~~lMiGG~~~a~~~~ 145 (300)
T COG1023 76 VIDDLAPLLSAGD--IVIDGGNSNYK--D---SLRRAKLLAEKGIHFLDVGTSG---GVWGAERGYCLMIGGDEEAVERL 145 (300)
T ss_pred HHHHHHhhcCCCC--EEEECCccchH--H---HHHHHHHHHhcCCeEEeccCCC---CchhhhcCceEEecCcHHHHHHH
Confidence 4566666666655 45664321111 0 1112222444455566555544 55678888777777788866666
Q ss_pred HHHHHHHh
Q 013839 296 RSQIQQIA 303 (435)
Q Consensus 296 ~~~l~~~~ 303 (435)
...++.+.
T Consensus 146 ~pif~~lA 153 (300)
T COG1023 146 EPIFKALA 153 (300)
T ss_pred HHHHHhhC
Confidence 66665543
No 470
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=29.90 E-value=83 Score=32.91 Aligned_cols=35 Identities=14% Similarity=0.008 Sum_probs=29.4
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccC
Q 013839 208 TGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFAS 242 (435)
Q Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~ 242 (435)
.+...+.++++++++.|+++|+-||.|-++..+..
T Consensus 199 ~~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~ 233 (613)
T TIGR01515 199 TSRFGTPDDFMYFVDACHQAGIGVILDWVPGHFPK 233 (613)
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEecccCcCC
Confidence 34455689999999999999999999999876653
No 471
>PF00218 IGPS: Indole-3-glycerol phosphate synthase; InterPro: IPR013798 Indole-3-glycerol phosphate synthase (4.1.1.48 from EC) (IGPS) catalyses the fourth step in the biosynthesis of tryptophan, the ring closure of 1-(2-carboxy-phenylamino)-1-deoxyribulose into indol-3-glycerol-phosphate. In some bacteria, IGPS is a single chain enzyme. In others, such as Escherichia coli, it is the N-terminal domain of a bifunctional enzyme that also catalyses N-(5'-phosphoribosyl)anthranilate isomerase (5.3.1.24 from EC) (PRAI) activity (see IPR001240 from INTERPRO), the third step of tryptophan biosynthesis. In fungi, IGPS is the central domain of a trifunctional enzyme that contains a PRAI C-terminal domain and a glutamine amidotransferase (2.4.2 from EC) (GATase) N-terminal domain (see IPR000991 from INTERPRO). A structure of the IGPS domain of the bifunctional enzyme from the mesophilic bacterium E. coli (eIGPS) has been compared with the monomeric indole-3-glycerol phosphate synthase from the hyperthermophilic archaeon Sulfolobus solfataricus (sIGPS). Both are single-domain (beta/alpha)8 barrel proteins, with one (eIGPS) or two (sIGPS) additional helices inserted before the first beta strand []. ; GO: 0004425 indole-3-glycerol-phosphate synthase activity; PDB: 1VC4_A 1PII_A 1JCM_P 1I4N_B 1J5T_A 3TSM_B 4FB7_A 3QJA_A 1JUL_A 2C3Z_A ....
Probab=29.88 E-value=69 Score=29.20 Aligned_cols=79 Identities=8% Similarity=-0.016 Sum_probs=45.6
Q ss_pred EEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 013839 145 HIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQF 224 (435)
Q Consensus 145 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~ 224 (435)
-|++....|.+....+.... ..+.+|+. ..+|-+|+.++.++-. -...+|++. -..++.++++++.+.|
T Consensus 86 SVlTe~~~F~Gs~~dL~~v~-~~~~~PvL-~KDFIid~~QI~eA~~---~GADaVLLI------~~~L~~~~l~~l~~~a 154 (254)
T PF00218_consen 86 SVLTEPKFFGGSLEDLRAVR-KAVDLPVL-RKDFIIDPYQIYEARA---AGADAVLLI------AAILSDDQLEELLELA 154 (254)
T ss_dssp EEE--SCCCHHHHHHHHHHH-HHSSS-EE-EES---SHHHHHHHHH---TT-SEEEEE------GGGSGHHHHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHH-HHhCCCcc-cccCCCCHHHHHHHHH---cCCCEeehh------HHhCCHHHHHHHHHHH
Confidence 35555566666655444321 12334543 3578999999988766 344444441 2457889999999999
Q ss_pred HhcCceeeee
Q 013839 225 KVKGHFPFFD 234 (435)
Q Consensus 225 ~~~~~~vi~D 234 (435)
++.|+-+++-
T Consensus 155 ~~lGle~lVE 164 (254)
T PF00218_consen 155 HSLGLEALVE 164 (254)
T ss_dssp HHTT-EEEEE
T ss_pred HHcCCCeEEE
Confidence 9999877764
No 472
>PF11629 Mst1_SARAH: C terminal SARAH domain of Mst1; InterPro: IPR024205 The SARAH (Sav/Rassf/Hpo) domain is found at the C terminus in three classes of eukaryotic tumour suppressors that give the domain its name. In the Sav (Salvador) and Hpo (Hippo) families, the SARAH domain mediates signal transduction from Hpo via the Sav scaffolding protein to the downstream component Wts (Warts); the phosphorylation of Wts by Hpo triggers cell cycle arrest and apoptosis by down-regulating cyclin E, Diap 1 and other targets []. The SARAH domain is also involved in dimerisation, as in the human Hpo orthologue, Mst1, which homodimerises via its C-terminal SARAH domain. The SARAH domain is found associated with other domains, such as protein kinase domains, WW/rsp5/WWP domain (IPR001202 from INTERPRO), C1 domain (IPR002219 from INTERPRO), LIM domain (IPR001781 from INTERPRO), or the Ras-associating (RA) domain (IPR000159 from INTERPRO).; GO: 0004674 protein serine/threonine kinase activity; PDB: 2JO8_A.
Probab=29.78 E-value=1.5e+02 Score=19.22 Aligned_cols=25 Identities=24% Similarity=0.327 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 013839 330 LWIDEVKIMADRIQRKRTTLRQNLE 354 (435)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~~l~ 354 (435)
..+..+++.+++|..+|+=+.+++.
T Consensus 23 ~ME~Eieelr~RY~~KRqPIldAie 47 (49)
T PF11629_consen 23 EMEQEIEELRQRYQAKRQPILDAIE 47 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHh
Confidence 3567889999999999998777763
No 473
>PRK04302 triosephosphate isomerase; Provisional
Probab=29.57 E-value=4e+02 Score=23.55 Aligned_cols=36 Identities=11% Similarity=-0.092 Sum_probs=25.4
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeee
Q 013839 195 SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFD 234 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~D 234 (435)
....+++++.... ++.++++++++.|+++|+.+|.+
T Consensus 85 G~~~vii~~ser~----~~~~e~~~~v~~a~~~Gl~~I~~ 120 (223)
T PRK04302 85 GAVGTLINHSERR----LTLADIEAVVERAKKLGLESVVC 120 (223)
T ss_pred CCCEEEEeccccc----cCHHHHHHHHHHHHHCCCeEEEE
Confidence 3456666554333 35667889999999999988863
No 474
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=29.56 E-value=2.5e+02 Score=26.52 Aligned_cols=56 Identities=11% Similarity=-0.102 Sum_probs=30.9
Q ss_pred ChHhHHHHhhcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHH-HHHhcCceeeeeccC
Q 013839 181 DFAALMDDIKNA--PDSSFFLLHPSAHNPTGVDPTEEQWREISY-QFKVKGHFPFFDMAY 237 (435)
Q Consensus 181 d~e~l~~~i~~~--~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~-~~~~~~~~vi~Deay 237 (435)
+.+.+++.++.. .+..+.|++ .-|.|-|.+..-+++.+-++ +.+++.+++++++.-
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL-~inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~A 139 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVL-RINSPGGSVVASELIARALKRLRAKKPVVVSVGGYA 139 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEE-EEECcCCchhHHHHHHHHHHHHhhcCCEEEEECCee
Confidence 455555444332 123333333 33789999987776544444 444445777777763
No 475
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=29.48 E-value=2.7e+02 Score=25.66 Aligned_cols=36 Identities=11% Similarity=-0.010 Sum_probs=28.2
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc-----CceeeeeccC
Q 013839 195 SSFFLLHPSAHNPTGVDPTEEQWREISYQFKVK-----GHFPFFDMAY 237 (435)
Q Consensus 195 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~-----~~~vi~Deay 237 (435)
+.++|. +|+..+.+..+.+.++++++ +..+++|-+.
T Consensus 88 ~~d~i~-------~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm 128 (281)
T PRK08176 88 QLRAVT-------TGYMGSASQIKILAEWLTALRADHPDLLIMVDPVI 128 (281)
T ss_pred cCCEEE-------ECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCcc
Confidence 456776 68888999999999998763 6778888763
No 476
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=29.07 E-value=2.3e+02 Score=26.19 Aligned_cols=50 Identities=12% Similarity=0.005 Sum_probs=31.9
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeee
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHY 172 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 172 (435)
..++|+.+..++. ..+.+.=--+|+++.-.-..-...++.+|++++.++-
T Consensus 58 ~~SsGN~g~alA~-~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~ 107 (291)
T cd01561 58 EPTSGNTGIGLAM-VAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPE 107 (291)
T ss_pred EeCCChHHHHHHH-HHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 5677787776663 2222222245666654445667788899999998864
No 477
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=29.05 E-value=70 Score=26.37 Aligned_cols=82 Identities=7% Similarity=0.081 Sum_probs=0.0
Q ss_pred hCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCC-----CCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCH
Q 013839 140 FHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDP-----DSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTE 214 (435)
Q Consensus 140 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-----~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~ 214 (435)
..+|++|.+..- +.+....++..+.++..++. ++ ..+.+..++-++.+ +...++++ ||..+--
T Consensus 8 ~~~~~~V~~VG~-f~P~~~~l~~~~~~v~v~d~-~~~~~~~~~~~~~~~~~~~~l----~~aD~vii------TGsTlvN 75 (147)
T PF04016_consen 8 IGPGDKVGMVGY-FQPLVEKLKERGAEVRVFDL-NPDNIGEEPGDVPDEDAEEIL----PWADVVII------TGSTLVN 75 (147)
T ss_dssp TTTTSEEEEES---HCCHHHHCCCCSEEEEEES-SGGG--SSCT-EEGGGHHHHG----GG-SEEEE------ECHHCCT
T ss_pred hcCCCEEEEEcC-cHHHHHHHhcCCCCEEEEEC-CCCCCCCCCCcCCHHHHHHHH----ccCCEEEE------Eeeeeec
Q ss_pred HHHHHHHHHHHhcCceeee
Q 013839 215 EQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 215 ~~l~~i~~~~~~~~~~vi~ 233 (435)
..+++|.+.|++....++.
T Consensus 76 ~Ti~~iL~~~~~~~~vil~ 94 (147)
T PF04016_consen 76 GTIDDILELARNAREVILY 94 (147)
T ss_dssp TTHHHHHHHTTTSSEEEEE
T ss_pred CCHHHHHHhCccCCeEEEE
No 478
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=29.01 E-value=4e+02 Score=23.70 Aligned_cols=27 Identities=7% Similarity=-0.057 Sum_probs=15.6
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEc
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFP 149 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~ 149 (435)
++.|+++++-... ...+...|.+|++.
T Consensus 11 lItGas~gIG~~~-a~~l~~~G~~v~~~ 37 (255)
T PRK06463 11 LITGGTRGIGRAI-AEAFLREGAKVAVL 37 (255)
T ss_pred EEeCCCChHHHHH-HHHHHHCCCEEEEE
Confidence 4666666655542 23345678777654
No 479
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.68 E-value=4.9e+02 Score=24.34 Aligned_cols=96 Identities=15% Similarity=0.063 Sum_probs=46.6
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCC---CChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEE
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDP---TWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFF 198 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p---~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ 198 (435)
+|.||.+-=.++ .+.+.+.|.++++-+- +.......++..| ++..+.++ -.+ .=++..+.+.+++.-....+
T Consensus 43 ITGgg~GlGr~i--alefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cd-is~-~eei~~~a~~Vk~e~G~V~I 117 (300)
T KOG1201|consen 43 ITGGGSGLGRLI--ALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCD-ISD-REEIYRLAKKVKKEVGDVDI 117 (300)
T ss_pred EeCCCchHHHHH--HHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEec-CCC-HHHHHHHHHHHHHhcCCceE
Confidence 666666644444 3445667877655442 2233444445455 66666552 210 11344445555544233444
Q ss_pred EEeCCCCCCC---CCCCCHHHHHHHHHH
Q 013839 199 LLHPSAHNPT---GVDPTEEQWREISYQ 223 (435)
Q Consensus 199 v~~~~p~NPt---G~~~~~~~l~~i~~~ 223 (435)
++ ||..=-+ ....+.+++++..++
T Consensus 118 LV-NNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 118 LV-NNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred EE-eccccccCCCccCCCHHHHHHHHHH
Confidence 44 4432222 234566666665543
No 480
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=28.59 E-value=1.7e+02 Score=28.30 Aligned_cols=82 Identities=10% Similarity=-0.036 Sum_probs=44.8
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEe
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLH 201 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~ 201 (435)
-..+|+.+..++. ..+.+.=--+|++|.-.-..-...++.+|++++.++- ..+.+-..+...+..+ ..+..+++
T Consensus 116 ~aSsGN~G~alA~-~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~--~~~~~~~~~~a~~l~~---~~~~~~~~ 189 (368)
T PLN02556 116 EPTSGNMGISLAF-MAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP--TKGMGGTVKKAYELLE---STPDAFML 189 (368)
T ss_pred EeCCchHHHHHHH-HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CCCccHHHHHHHHHHH---hcCCCCcc
Confidence 4678888877763 1222222245566655545667788999999988753 1111123344444444 22344555
Q ss_pred CCCCCCCC
Q 013839 202 PSAHNPTG 209 (435)
Q Consensus 202 ~~p~NPtG 209 (435)
+..+||.+
T Consensus 190 ~q~~np~~ 197 (368)
T PLN02556 190 QQFSNPAN 197 (368)
T ss_pred CCCCCHHH
Confidence 54556654
No 481
>PRK14706 glycogen branching enzyme; Provisional
Probab=28.56 E-value=77 Score=33.28 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=30.1
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCccC
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFAS 242 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~~ 242 (435)
|+....+.++++++++.|++.|+-||.|-+|..+..
T Consensus 209 ~~~~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~ 244 (639)
T PRK14706 209 PTSRLGTPEDFKYLVNHLHGLGIGVILDWVPGHFPT 244 (639)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEecccccCc
Confidence 444455789999999999999999999999877653
No 482
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=28.33 E-value=5e+02 Score=24.33 Aligned_cols=106 Identities=11% Similarity=0.071 Sum_probs=59.9
Q ss_pred CCCeeeEecCCchhHHHHHHHHHHHhCCCC--EEEEcC--CCChhhHHHHh--hCCCCeeeeeecCCCCCCcChHhHHHH
Q 013839 115 EGRSAGVQALSGTGACRLFAEFQRRFHPES--HIYFPD--PTWSNHHNIWR--DAQIPERTYHYYDPDSKSLDFAALMDD 188 (435)
Q Consensus 115 ~~~v~~~~t~gg~~a~~~~~~~~~~~~~gd--~Vlv~~--p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~e~l~~~ 188 (435)
.++|. +|.|.+...+.. +..-...|. +|+|.+ |-+.++..... ..|++...++ | ..+.+.
T Consensus 162 snEvi--LT~g~SrTV~~F--L~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~ 227 (353)
T KOG1465|consen 162 SNEVI--LTLGSSRTVENF--LKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAM 227 (353)
T ss_pred cCceE--EecCccHHHHHH--HHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHH
Confidence 46788 899987777665 222233443 466665 55555544333 4565554443 1 234444
Q ss_pred hhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeeccC
Q 013839 189 IKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMAY 237 (435)
Q Consensus 189 i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay 237 (435)
+.+ --++|+-...--+-|-+....-...++..|++|-.++|+=.-.
T Consensus 228 Msr---VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~ 273 (353)
T KOG1465|consen 228 MSR---VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPM 273 (353)
T ss_pred hhh---cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecch
Confidence 542 2244444443344444555555667888899998888876553
No 483
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=28.13 E-value=65 Score=33.61 Aligned_cols=29 Identities=10% Similarity=0.166 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhcCceeeeeccCCCcc
Q 013839 213 TEEQWREISYQFKVKGHFPFFDMAYQGFA 241 (435)
Q Consensus 213 ~~~~l~~i~~~~~~~~~~vi~Deay~~~~ 241 (435)
..++++++++-|++.|+-||.|-+|....
T Consensus 227 ~~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 227 RIRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 36899999999999999999999986654
No 484
>PLN02565 cysteine synthase
Probab=27.99 E-value=3.8e+02 Score=25.35 Aligned_cols=49 Identities=12% Similarity=-0.070 Sum_probs=31.5
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
-.++|+.+..++. ..+.+.---+|.+|.-.-..-...++.+|++++.++
T Consensus 72 ~aSsGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~ 120 (322)
T PLN02565 72 EPTSGNTGIGLAF-MAAAKGYKLIITMPASMSLERRIILLAFGAELVLTD 120 (322)
T ss_pred EECCChHHHHHHH-HHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeC
Confidence 5678888877763 222222224555665555566778999999998774
No 485
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=27.81 E-value=2.5e+02 Score=26.96 Aligned_cols=70 Identities=10% Similarity=0.021 Sum_probs=41.1
Q ss_pred CCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCce
Q 013839 151 PTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHF 230 (435)
Q Consensus 151 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 230 (435)
|.|..+.+++....+..+.++...++ ..-.+-..++++ ...-+++ .-|.. .++.+++.+.|+++|+.
T Consensus 51 ~~y~~~eell~d~Di~~V~ipt~~P~--~~H~e~a~~aL~---aGkHVL~----EKPla----~~Ea~el~~~A~~~g~~ 117 (343)
T TIGR01761 51 PLYCEVEELPDDIDIACVVVRSAIVG--GQGSALARALLA---RGIHVLQ----EHPLH----PRDIQDLLRLAERQGRR 117 (343)
T ss_pred CccCCHHHHhcCCCEEEEEeCCCCCC--ccHHHHHHHHHh---CCCeEEE----cCCCC----HHHHHHHHHHHHHcCCE
Confidence 46777777765444455555431111 223445555555 3334443 44553 48888999999999888
Q ss_pred eee
Q 013839 231 PFF 233 (435)
Q Consensus 231 vi~ 233 (435)
+.+
T Consensus 118 l~v 120 (343)
T TIGR01761 118 YLV 120 (343)
T ss_pred EEE
Confidence 886
No 486
>PRK05402 glycogen branching enzyme; Provisional
Probab=27.73 E-value=84 Score=33.66 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=29.8
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeeccCCCcc
Q 013839 207 PTGVDPTEEQWREISYQFKVKGHFPFFDMAYQGFA 241 (435)
Q Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~vi~Deay~~~~ 241 (435)
|.....+.++++++++.|+++|+-||.|-++..+.
T Consensus 307 i~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~ 341 (726)
T PRK05402 307 PTSRFGTPDDFRYFVDACHQAGIGVILDWVPAHFP 341 (726)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 34556678999999999999999999999987664
No 487
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=27.62 E-value=4e+02 Score=23.18 Aligned_cols=44 Identities=18% Similarity=0.072 Sum_probs=26.0
Q ss_pred ChHhHHHHhhcCCCC-cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q 013839 181 DFAALMDDIKNAPDS-SFFLLHPSAHNPTGVDPTEEQWREISYQFKV 226 (435)
Q Consensus 181 d~e~l~~~i~~~~~~-~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~ 226 (435)
|++...+.++.-+.+ ..+|+..-.+|+||.... |=..+.++|.+
T Consensus 121 dp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~--Dh~~~i~LC~s 165 (232)
T KOG4589|consen 121 DPETYRKIFEALPNRPVDVVLSDMAPNATGVRIR--DHYRSIELCDS 165 (232)
T ss_pred CHHHHHHHHHhCCCCcccEEEeccCCCCcCcchh--hHHHHHHHHHH
Confidence 444444444433333 456666668899998764 33466777764
No 488
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=27.49 E-value=88 Score=24.85 Aligned_cols=59 Identities=17% Similarity=0.282 Sum_probs=28.2
Q ss_pred CcChHhH-HHHhhcCCCCcEEEEeCCCCCCCCCCC-CHHHH---HHHHHHHHhc-----CceeeeeccCCCcc
Q 013839 179 SLDFAAL-MDDIKNAPDSSFFLLHPSAHNPTGVDP-TEEQW---REISYQFKVK-----GHFPFFDMAYQGFA 241 (435)
Q Consensus 179 ~~d~e~l-~~~i~~~~~~~~~v~~~~p~NPtG~~~-~~~~l---~~i~~~~~~~-----~~~vi~Deay~~~~ 241 (435)
.+++.++ +.++.. .-+.+++. .|.|+|... +.+|+ ++|.+.|+.. +.+||.++-|..|.
T Consensus 50 ~v~~R~I~~~al~~--~A~~vIl~--HNHPsG~~~PS~~D~~~T~~L~~~~~~l~I~llDHiIv~~~~~~S~~ 118 (123)
T PF04002_consen 50 PVDPREIFRRALRL--NASSVILA--HNHPSGDPEPSDADIALTRRLKKAARLLGIELLDHIIVGDGGYFSFR 118 (123)
T ss_dssp GCSHHHHHHHHHHT--T-SEEEEE--EE-TTS--S--HHHHHHHHHHHHHHHHHT-EEEEEEEEESSEEEETC
T ss_pred cccHHHHHHHHHhh--CCceEEEE--EEcCCCCCCCCHhHHHHHHHHHHHHHHcCCeeeeEEEEeCCcEEEeh
Confidence 3455554 444552 22333332 245666654 56666 6666667763 44556566654444
No 489
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=27.32 E-value=3.3e+02 Score=24.89 Aligned_cols=74 Identities=4% Similarity=-0.091 Sum_probs=40.7
Q ss_pred CEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 013839 144 SHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQ 223 (435)
Q Consensus 144 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~ 223 (435)
+.|-+..|. +....+...+.+++..+. ++ ..+++++.+. ...++++ ++.-|++ +...++++.
T Consensus 53 ~~v~~~~~~--~~~~~i~~~~pe~~~~~~--~~----~~~~~~~~~~----~~davvi-g~Gl~~~-----~~~~~l~~~ 114 (272)
T TIGR00196 53 GLVTVAAPE--NVITLINSVSPELIVHRL--GW----KVDEDEELLE----RYDVVVI-GPGLGQD-----PSFKKAVEE 114 (272)
T ss_pred CeEEEEEch--hhHHHHhhcCCEEEEecc--hh----hHHHHHhhhc----cCCEEEE-cCCCCCC-----HHHHHHHHH
Confidence 455555554 223334555555554443 11 3455555443 3345555 3333333 336788888
Q ss_pred HHhcCceeeeec
Q 013839 224 FKVKGHFPFFDM 235 (435)
Q Consensus 224 ~~~~~~~vi~De 235 (435)
+++++..+|.|.
T Consensus 115 ~~~~~~pvVlDa 126 (272)
T TIGR00196 115 VLELDKPVVLDA 126 (272)
T ss_pred HHhcCCCEEEEh
Confidence 999999999995
No 490
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=27.29 E-value=75 Score=30.48 Aligned_cols=20 Identities=15% Similarity=-0.174 Sum_probs=16.7
Q ss_pred HHHHHHHHHhcCceeeeecc
Q 013839 217 WREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 217 l~~i~~~~~~~~~~vi~Dea 236 (435)
--+|.++|++||+++++|-.
T Consensus 298 AlkIreiA~e~~Ipi~enpp 317 (363)
T COG1377 298 ALKIREIAKEHGIPIIENPP 317 (363)
T ss_pred HHHHHHHHHHcCCceecChH
Confidence 35789999999999999853
No 491
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=27.19 E-value=65 Score=30.61 Aligned_cols=75 Identities=13% Similarity=0.032 Sum_probs=40.9
Q ss_pred HHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEE---eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeee
Q 013839 157 HNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLL---HPSAHNPTGVDPTEEQWREISYQFKVKGHFPFF 233 (435)
Q Consensus 157 ~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~---~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~ 233 (435)
...+..++++.....+.| ++.+..+.....-.........+. ......+.+-.+|++++++|++.|+++|+-||=
T Consensus 23 id~ma~~K~N~lhlHltD--~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~vIP 100 (326)
T cd06564 23 IKTMSWYKMNDLQLHLND--NLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELIAYAKDRGVNIIP 100 (326)
T ss_pred HHHHHHcCCceEEEeecC--CcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHHHHHHHcCCeEec
Confidence 344556788888887754 445443322111100000000000 001122446678999999999999999987763
No 492
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=27.16 E-value=55 Score=22.34 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=20.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeeeeccC
Q 013839 205 HNPTGVDPTEEQWREISYQFKVKGHFPFFDMAY 237 (435)
Q Consensus 205 ~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Deay 237 (435)
..|.+...+.++++++.+-..+-+.+.+.+..|
T Consensus 26 ~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 26 KDPGGYDISLEELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp GGG--TT--HHHHHHHHHHHHHTTSEE--TTEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEE
Confidence 456778889999999988777767777667665
No 493
>PLN03013 cysteine synthase
Probab=27.15 E-value=4.1e+02 Score=26.39 Aligned_cols=49 Identities=8% Similarity=-0.050 Sum_probs=32.1
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeee
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYH 171 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 171 (435)
-..+|+.++.++. ..+..+=.-+|++|+-.-..-...++.+|++++.++
T Consensus 180 eaSSGN~G~ALA~-~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~ 228 (429)
T PLN03013 180 EPTSGNTGIGLAF-IAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD 228 (429)
T ss_pred EECCcHHHHHHHH-HHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 5678888877763 222222224566666555666788999999998875
No 494
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=27.06 E-value=1.9e+02 Score=23.84 Aligned_cols=60 Identities=18% Similarity=0.196 Sum_probs=38.5
Q ss_pred hHHHHhhCCCCeeeeeecCCCCCCcChHhHHHHhhcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHH
Q 013839 156 HHNIWRDAQIPERTYHYYDPDSKSLDFAALMDDIKNAPD--SSFFLLHPSAHNPTGVDPTEEQWREI 220 (435)
Q Consensus 156 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~--~~~~v~~~~p~NPtG~~~~~~~l~~i 220 (435)
....++..|+++..+..- .+ |.+++++.+.+... +..+++++-...++-..++++-++++
T Consensus 25 l~~~l~~~G~~v~~~~~v-~D----d~~~i~~~l~~~~~~~~~DlVittGG~s~g~~D~t~~al~~~ 86 (152)
T cd00886 25 LVELLEEAGHEVVAYEIV-PD----DKDEIREALIEWADEDGVDLILTTGGTGLAPRDVTPEATRPL 86 (152)
T ss_pred HHHHHHHcCCeeeeEEEc-CC----CHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcCcHHHHHHH
Confidence 355678889988877653 33 66777777664322 56788876666666666666644443
No 495
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=27.01 E-value=53 Score=24.07 Aligned_cols=21 Identities=19% Similarity=-0.167 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhcCceeeeecc
Q 013839 216 QWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 216 ~l~~i~~~~~~~~~~vi~Dea 236 (435)
.-++|.++|+++|++++.|..
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHH
Confidence 346899999999999999975
No 496
>PRK06483 dihydromonapterin reductase; Provisional
Probab=26.76 E-value=4.3e+02 Score=23.07 Aligned_cols=46 Identities=9% Similarity=-0.154 Sum_probs=22.4
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCee
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPER 168 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 168 (435)
++.|+++++-... ...+...|.+|++.+-.-......++..|...+
T Consensus 6 lItGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~ 51 (236)
T PRK06483 6 LITGAGQRIGLAL-AWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCI 51 (236)
T ss_pred EEECCCChHHHHH-HHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEE
Confidence 4556666554442 223456787877655332222333344454333
No 497
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=26.65 E-value=1.2e+02 Score=26.76 Aligned_cols=50 Identities=4% Similarity=-0.154 Sum_probs=34.6
Q ss_pred hHhHHHHhhcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeeeecc
Q 013839 182 FAALMDDIKNAPDSSFFLLHPSAHNPTGVDPTEEQWREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 182 ~e~l~~~i~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi~Dea 236 (435)
.+.+++++. ....++-+=.-+..+-.. .+..+++.++|++|++.+|+++-
T Consensus 24 ~~~ve~al~---~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALK---GGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHh---CCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCc
Confidence 688888887 565666653333333111 45568899999999999998875
No 498
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=26.59 E-value=1.9e+02 Score=26.28 Aligned_cols=92 Identities=12% Similarity=0.051 Sum_probs=49.9
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCChhhHHHHhhCCCCeeeeeecCCCCCCc-ChHhHHHHhhcCCCCcEEEE
Q 013839 122 QALSGTGACRLFAEFQRRFHPESHIYFPDPTWSNHHNIWRDAQIPERTYHYYDPDSKSL-DFAALMDDIKNAPDSSFFLL 200 (435)
Q Consensus 122 ~t~gg~~a~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~e~l~~~i~~~~~~~~~v~ 200 (435)
+..|++++-.++ ..+...|. |++..-+ .|...+..-......+.. +++ |.+++++.+.++ +..+|+
T Consensus 5 vlgGTtE~r~la---~~L~~~g~-v~~sv~t--~~g~~~~~~~~~~~~v~~-----G~lg~~~~l~~~l~~~--~i~~vI 71 (249)
T PF02571_consen 5 VLGGTTEGRKLA---ERLAEAGY-VIVSVAT--SYGGELLKPELPGLEVRV-----GRLGDEEGLAEFLREN--GIDAVI 71 (249)
T ss_pred EEechHHHHHHH---HHHHhcCC-EEEEEEh--hhhHhhhccccCCceEEE-----CCCCCHHHHHHHHHhC--CCcEEE
Confidence 667778887766 33445666 5544322 222222211111112211 356 889999988753 344444
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceee
Q 013839 201 HPSAHNPTGVDPTEEQWREISYQFKVKGHFPF 232 (435)
Q Consensus 201 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~vi 232 (435)
...+|.-..++. .+.+.|++.|+..+
T Consensus 72 --DATHPfA~~is~----na~~a~~~~~ipyl 97 (249)
T PF02571_consen 72 --DATHPFAAEISQ----NAIEACRELGIPYL 97 (249)
T ss_pred --ECCCchHHHHHH----HHHHHHhhcCcceE
Confidence 566777554443 46667888887654
No 499
>PRK14723 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=26.51 E-value=5.7e+02 Score=27.63 Aligned_cols=130 Identities=11% Similarity=0.103 Sum_probs=62.2
Q ss_pred cHHHHHHHHHhHcCC--CCccccCCCeeeEecCCchhHHHHHHHHHHHh--CCC-CEEEEcC-CCCh-hhHHHHh----h
Q 013839 94 STKMVEESVKLVYGK--DSDVVKEGRSAGVQALSGTGACRLFAEFQRRF--HPE-SHIYFPD-PTWS-NHHNIWR----D 162 (435)
Q Consensus 94 ~~~lr~~ia~~l~~~--~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~--~~g-d~Vlv~~-p~y~-~~~~~~~----~ 162 (435)
...+++.+.+.+.-. ....+....|++++-+.|.+=..++..+...+ ..| ++|.+.+ -+|. +..+.++ .
T Consensus 161 ~~~l~~~L~~~l~il~~~~~~~~~g~Vi~lVGpnGvGKTTTiaKLA~~~~~~~G~kkV~lit~Dt~RigA~eQL~~~a~~ 240 (767)
T PRK14723 161 MAWIRNELATHLPVLRDEDALLAQGGVLALVGPTGVGKTTTTAKLAARCVAREGADQLALLTTDSFRIGALEQLRIYGRI 240 (767)
T ss_pred HHHHHHHHHHHhhhccCCCcccCCCeEEEEECCCCCcHHHHHHHHHhhHHHHcCCCeEEEecCcccchHHHHHHHHHHHh
Confidence 344556666654211 11112234677666666655444444444333 345 5665443 3442 2233333 3
Q ss_pred CCCCeeeeeecCCCCCCcChHhHHHHhhcCCCCcEEEEeCCCC-CCCCCCCCHHHHHHHHHHH---HhcCceeeeeccC
Q 013839 163 AQIPERTYHYYDPDSKSLDFAALMDDIKNAPDSSFFLLHPSAH-NPTGVDPTEEQWREISYQF---KVKGHFPFFDMAY 237 (435)
Q Consensus 163 ~g~~~~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~v~~~~p~-NPtG~~~~~~~l~~i~~~~---~~~~~~vi~Deay 237 (435)
.|..+.. ..|++++.+.+.+.. ...+|++..+. +|. ..+..+++..+. ..+..+++.|..+
T Consensus 241 ~gvpv~~---------~~~~~~l~~al~~~~-~~D~VLIDTAGRs~~----d~~l~eel~~l~~~~~p~e~~LVLsAt~ 305 (767)
T PRK14723 241 LGVPVHA---------VKDAADLRFALAALG-DKHLVLIDTVGMSQR----DRNVSEQIAMLCGVGRPVRRLLLLNAAS 305 (767)
T ss_pred CCCCccc---------cCCHHHHHHHHHHhc-CCCEEEEeCCCCCcc----CHHHHHHHHHHhccCCCCeEEEEECCCC
Confidence 4432221 126677877777553 34677775543 222 222233333333 3467888888774
No 500
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=26.37 E-value=44 Score=24.79 Aligned_cols=20 Identities=20% Similarity=-0.140 Sum_probs=17.4
Q ss_pred HHHHHHHHHhcCceeeeecc
Q 013839 217 WREISYQFKVKGHFPFFDMA 236 (435)
Q Consensus 217 l~~i~~~~~~~~~~vi~Dea 236 (435)
-++|++.|++|++++..|..
T Consensus 34 Ae~II~~Ake~~Vpi~edp~ 53 (92)
T COG2257 34 AEKIIEKAKEHGVPIQEDPL 53 (92)
T ss_pred HHHHHHHHHHcCCCcccCHH
Confidence 45999999999999988865
Done!