BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013840
(435 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255559360|ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
gi|223540085|gb|EEF41662.1| RNA binding protein, putative [Ricinus communis]
Length = 436
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/436 (86%), Positives = 402/436 (92%), Gaps = 1/436 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE KKEKKSSEE VKLFVGQVPKHMTE QLLAMFKEFALVDEVNIIKDKTTRASRGCCF
Sbjct: 1 MAEDKKEKKSSEESVKLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS
Sbjct: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW
Sbjct: 121 ELFSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKERQARRAQK QSQA+NLPNADSQHPSLFGALPMGY P YNGYGYQA G+YGLM Y
Sbjct: 181 ADTEKERQARRAQKVQSQASNLPNADSQHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPY 240
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMR-GASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ 299
RLPP+Q+QP FH IIPPVNQGNA+R G PDL +MGPRNYA+PP+ +VGS YPAVPG+Q
Sbjct: 241 RLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQ 300
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQ 359
YPM YPGGM+ RPL++SPG+VSP V +SN +TSS + SGGQ+EGPPG+NLFIYHIPQ
Sbjct: 301 YPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSNLFIYHIPQ 360
Query: 360 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 419
EFGDQEL +AFQ +G+VLSAKVFVDKATGVSKCFGFVSY+SP +AQ AI MMNGCQLGGK
Sbjct: 361 EFGDQELASAFQPYGKVLSAKVFVDKATGVSKCFGFVSYDSPTAAQTAINMMNGCQLGGK 420
Query: 420 KLKVQLKRDNKQNKPY 435
KLKVQLKRDNKQ+KPY
Sbjct: 421 KLKVQLKRDNKQSKPY 436
>gi|225436819|ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
vinifera]
gi|296086641|emb|CBI32276.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/437 (82%), Positives = 398/437 (91%), Gaps = 2/437 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE+ K +K+SE+ VKLFVGQVPK+MTEAQLLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEAPKPRKASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSRQEADKAVNACHNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS
Sbjct: 61 VICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW
Sbjct: 121 SLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
ADTEKERQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGYGYQA G+YGLMQ
Sbjct: 181 ADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQ 240
Query: 240 YRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ 299
YR+PPMQ+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + ++GS YPA+PGLQ
Sbjct: 241 YRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQ 300
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQ 359
YPM Y GG++ H+PL+ SPGS PA+ SN T+S G SGGQ+EGPPGANLFIYHIPQ
Sbjct: 301 YPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLFIYHIPQ 360
Query: 360 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 419
EFGD EL +AFQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ+AI+MMNGCQLGGK
Sbjct: 361 EFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSAISMMNGCQLGGK 420
Query: 420 KLKVQLKRD-NKQNKPY 435
KLKVQLKRD NKQNKPY
Sbjct: 421 KLKVQLKRDNNKQNKPY 437
>gi|359479768|ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
vinifera]
Length = 447
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/447 (80%), Positives = 398/447 (89%), Gaps = 12/447 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE+ K +K+SE+ VKLFVGQVPK+MTEAQLLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEAPKPRKASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGML 110
VICPSRQEADKAVNACHNK+TLPGASSPLQVKYADGELERL EHKLF+GML
Sbjct: 61 VICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLGVIFCHPCYPEHKLFVGML 120
Query: 111 PKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
PKNVSEAEVS+LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME
Sbjct: 121 PKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 180
Query: 171 GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGY 229
GSSVPLVVKWADTEKERQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGYGY
Sbjct: 181 GSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGY 240
Query: 230 QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
QA G+YGLMQYR+PPMQ+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + ++G
Sbjct: 241 QAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMG 300
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 349
S YPA+PGLQYPM Y GG++ H+PL+ SPGS PA+ SN T+S G SGGQ+EGPPG
Sbjct: 301 SAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPG 360
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 409
ANLFIYHIPQEFGD EL +AFQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ+AI+
Sbjct: 361 ANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSAIS 420
Query: 410 MMNGCQLGGKKLKVQLKRD-NKQNKPY 435
MMNGCQLGGKKLKVQLKRD NKQNKPY
Sbjct: 421 MMNGCQLGGKKLKVQLKRDNNKQNKPY 447
>gi|224128620|ref|XP_002320377.1| predicted protein [Populus trichocarpa]
gi|222861150|gb|EEE98692.1| predicted protein [Populus trichocarpa]
Length = 432
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/425 (83%), Positives = 384/425 (90%), Gaps = 5/425 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+EE VKLFVGQVPK+MTEA+LLAMFK+FALVDEVNIIKDKTTRASRGCCF+ICPSRQEAD
Sbjct: 12 NEESVKLFVGQVPKNMTEAELLAMFKDFALVDEVNIIKDKTTRASRGCCFLICPSRQEAD 71
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS LFS YGTIK
Sbjct: 72 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSDLFSKYGTIK 131
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
DLQILRGSQQTSK CAFLKYETKEQALAALE INGKHKMEGSSVPLVVKWADTEKERQAR
Sbjct: 132 DLQILRGSQQTSKSCAFLKYETKEQALAALEDINGKHKMEGSSVPLVVKWADTEKERQAR 191
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
RAQKAQSQA +PN DSQHPSLFGALPMGYAPPYNGYGYQA G YGLM YRLPPMQNQP
Sbjct: 192 RAQKAQSQA--MPNTDSQHPSLFGALPMGYAPPYNGYGYQAPGVYGLMPYRLPPMQNQPA 249
Query: 251 FHGIIPPVNQGNAMRGA-SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
FH ++PPVNQGN +RG PDLS N+ PRNYA P+ ++GS YP V GLQYP+ YPG M+
Sbjct: 250 FHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA--PATYMGSAYPTVTGLQYPVAYPGAMM 307
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNA 369
HRPL++SPG++SP V +SN +T S G SG Q+EGPPGANLFIYHIPQEFGDQEL NA
Sbjct: 308 THRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQVEGPPGANLFIYHIPQEFGDQELANA 367
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
F+AFG+VLSAKVFVDK TGVSKCFGFVSY+SPA+AQNAI MMNG QLGGKKLKVQLKRDN
Sbjct: 368 FEAFGKVLSAKVFVDKVTGVSKCFGFVSYDSPAAAQNAITMMNGFQLGGKKLKVQLKRDN 427
Query: 430 KQNKP 434
KQ+KP
Sbjct: 428 KQSKP 432
>gi|356505495|ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 431
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/435 (82%), Positives = 388/435 (89%), Gaps = 4/435 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E KSSEE VKLFVGQVPKHMTE +LLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEGKEESKSSEESVKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE E+S
Sbjct: 61 VICPSREEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEIS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
ALFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQAL ALEAINGKHKMEGSSVPLVVKW
Sbjct: 121 ALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALTALEAINGKHKMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKERQARRAQKAQSQA+N+P+ DSQHPSLFGALPM Y PPYNGYGYQA YGLM Y
Sbjct: 181 ADTEKERQARRAQKAQSQASNVPHTDSQHPSLFGALPMSYVPPYNGYGYQAPVGYGLMPY 240
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
R+PPMQ+Q G+H ++P +NQGNA+R PDL NM PRNY +PP+ +VGS YPAVPGLQ+
Sbjct: 241 RMPPMQSQHGYHNMMPHMNQGNALR---PDLGPNMNPRNYHVPPASYVGS-YPAVPGLQH 296
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQE 360
PM YP GM+ RP+N SPGSVSPA N+N + SS SGGQ EGPPGANLFIYHIPQE
Sbjct: 297 PMAYPTGMISPRPMNTSPGSVSPASGNNNHAASSGASKNSGGQAEGPPGANLFIYHIPQE 356
Query: 361 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 420
FGDQEL AFQ FGRVLSAKVFVDKATGVSKCFGFVSY++P +AQ+AI+MMNGCQLGGKK
Sbjct: 357 FGDQELATAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKK 416
Query: 421 LKVQLKRDNKQNKPY 435
LKVQLKRDNKQ KPY
Sbjct: 417 LKVQLKRDNKQGKPY 431
>gi|356572661|ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
Length = 429
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/421 (81%), Positives = 375/421 (89%), Gaps = 4/421 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHMTE +LLAMFKEFALVDEVNIIKDK TRASRGCCF+ICPSR+EADKAVN
Sbjct: 13 VKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFLICPSREEADKAVN 72
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE E+SALFS YGTIKDLQI
Sbjct: 73 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFSKYGTIKDLQI 132
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME SSVPLVVKWADTEKERQARRAQK
Sbjct: 133 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEDSSVPLVVKWADTEKERQARRAQK 192
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
AQSQA+N+P+ DSQH S+FGALPM Y PPYNGY YQA G YGLM YR+PPMQ+Q G+H +
Sbjct: 193 AQSQASNVPHTDSQHLSMFGALPMSYVPPYNGYAYQAPGGYGLMPYRMPPMQSQHGYHNV 252
Query: 255 IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL 314
+P +NQ NA+R PDL NM PRNY +PP+ +V S YPAVPGLQ+PM YP GM+ RP+
Sbjct: 253 MPHMNQVNALR---PDLGPNMNPRNYHVPPASYV-SSYPAVPGLQHPMAYPTGMISPRPM 308
Query: 315 NNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFG 374
N SPGSVSPA N++ + SS SGGQ+EGPPGANLFIYHIPQEFGDQEL AFQ FG
Sbjct: 309 NTSPGSVSPAGGNNSSAASSGASKNSGGQVEGPPGANLFIYHIPQEFGDQELATAFQPFG 368
Query: 375 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
RVLSAKVFVDKATGVSKCFGFVSY++P +AQ+AI+MMNGCQLGGKKLKVQLKRDNKQ KP
Sbjct: 369 RVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDNKQGKP 428
Query: 435 Y 435
Y
Sbjct: 429 Y 429
>gi|449462310|ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
Length = 438
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/442 (79%), Positives = 381/442 (86%), Gaps = 11/442 (2%)
Query: 1 MAESKK--EKKSS-----EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR 53
MAE + E+K S E+ VKLFVGQVPKHMTE QLL MF+EFALVDEVNII+DKTTR
Sbjct: 1 MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60
Query: 54 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 113
ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN
Sbjct: 61 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
Query: 114 VSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 173
VSE EVS LFS YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGK KMEGSS
Sbjct: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180
Query: 174 VPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASG 233
VPLVVKWADTEKERQAR+AQKAQSQA N+ NADSQHPSLFGA+P+GY PPYNGYGYQA G
Sbjct: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240
Query: 234 SYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP 293
SYGLMQY LPPMQNQ GF +IP +NQGNAMRG PDL M RNYAMPP+ + S YP
Sbjct: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP 298
Query: 294 AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLF 353
VP LQ+PM YPGGM+ +++SPG P N S +SS G GSGGQIEGPPGANLF
Sbjct: 299 GVPALQHPMAYPGGMMSPGVVSSSPGP-GPFTGGKN-SPTSSMGKGSGGQIEGPPGANLF 356
Query: 354 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 413
IYHIPQEFGD+EL N+F+AFGRVLSAKVFVDK +GVSKCFGFVSY+S +AQ+AI+ MNG
Sbjct: 357 IYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNG 416
Query: 414 CQLGGKKLKVQLKRDNKQNKPY 435
CQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 417 CQLGGKKLKVQLKRDNKQSKPY 438
>gi|356535559|ref|XP_003536312.1| PREDICTED: CUGBP Elav-like family member 1-B-like [Glycine max]
Length = 429
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/435 (78%), Positives = 376/435 (86%), Gaps = 7/435 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E K SEE VKLFVGQVPK M E ++LAMFKEFALVDEVNII+DK +RASRGCCF
Sbjct: 2 MAEGKEESKFSEESVKLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRASRGCCF 61
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS
Sbjct: 62 VICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVS 121
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LFS+YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKH MEGSSVPLVVKW
Sbjct: 122 DLFSMYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHTMEGSSVPLVVKW 181
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKER ARRAQKAQSQ +N+P AD QHPSLFGALPMGY PPYNGYGYQA G YGLM Y
Sbjct: 182 ADTEKERLARRAQKAQSQVSNMPQADPQHPSLFGALPMGYVPPYNGYGYQAPGGYGLMAY 241
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
R PPMQNQPGFH + +NQ NA+R PDL ++ PRNY PP+ ++G YPAVPG+Q+
Sbjct: 242 RFPPMQNQPGFHNM--NMNQVNAVR---PDLGHSVNPRNYHAPPASYIGP-YPAVPGVQH 295
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQE 360
PM YP ++ RP+++S GSVSPA NSN S+SS S GQIEGPPGANLFIYHIPQE
Sbjct: 296 PMVYPRRIVSPRPMSSSSGSVSPAGGNSN-SSSSGASKSSSGQIEGPPGANLFIYHIPQE 354
Query: 361 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 420
+GD+EL FQ FGRVLSAK+FVDK TGVSKCFGFVSY++P +AQ+AI+ MNGCQLGGKK
Sbjct: 355 YGDEELATTFQPFGRVLSAKIFVDKVTGVSKCFGFVSYDTPEAAQSAISTMNGCQLGGKK 414
Query: 421 LKVQLKRDNKQNKPY 435
LKVQLKRDNKQ+K Y
Sbjct: 415 LKVQLKRDNKQSKIY 429
>gi|356500250|ref|XP_003518946.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 426
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/435 (78%), Positives = 373/435 (85%), Gaps = 9/435 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E KSSEE VKLFVGQVPK M+E ++LAMFKE ALVDEVNII+DK TRASRGCCF
Sbjct: 1 MAEGKEESKSSEESVKLFVGQVPKRMSEDEVLAMFKELALVDEVNIIRDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS
Sbjct: 61 VICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LFS YGTIKDLQILRGSQ TSKGCAFLKYETKEQA ALEAINGKH MEGSSVPLVVKW
Sbjct: 121 NLFSKYGTIKDLQILRGSQHTSKGCAFLKYETKEQAFTALEAINGKHTMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKER ARRAQK QS+ +N P+AD QHPSLFGALPMGY PPYNGYGYQA G YGLM Y
Sbjct: 181 ADTEKERLARRAQKTQSRVSNAPHADPQHPSLFGALPMGYVPPYNGYGYQAPGGYGLMPY 240
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
R PP+QNQPGFH + NQ NA+R PDL +M PRNY PP+ ++GS YPAVPG+Q+
Sbjct: 241 RFPPVQNQPGFHNM----NQANAVR---PDLGHSMNPRNYPAPPASYIGS-YPAVPGIQH 292
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQE 360
PM YP G++ RP+++ PGSVSPA NSN S+SS S GQIEGPPGANLFIYHIPQE
Sbjct: 293 PMVYPRGIVSPRPMSSCPGSVSPAGGNSN-SSSSGASKSSSGQIEGPPGANLFIYHIPQE 351
Query: 361 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 420
+GDQEL AFQ FGRVLSAK+FVDK TGVSKCFGFVSY++P +AQ AI+ MNGCQLGGKK
Sbjct: 352 YGDQELTTAFQPFGRVLSAKIFVDKVTGVSKCFGFVSYDTPEAAQAAISTMNGCQLGGKK 411
Query: 421 LKVQLKRDNKQNKPY 435
LKVQLKRDNKQ+K Y
Sbjct: 412 LKVQLKRDNKQSKIY 426
>gi|224068763|ref|XP_002302819.1| predicted protein [Populus trichocarpa]
gi|222844545|gb|EEE82092.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/421 (77%), Positives = 350/421 (83%), Gaps = 43/421 (10%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHMTE ++LAMFKEFALVDEVNIIKDKTTRASRGCCF+ICPSRQEADKAVN
Sbjct: 19 VKLFVGQVPKHMTEDEVLAMFKEFALVDEVNIIKDKTTRASRGCCFLICPSRQEADKAVN 78
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAE+S LFS YG IKDLQI
Sbjct: 79 ACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAELSDLFSKYGIIKDLQI 138
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRGSQQTSKGCAFLKYETKEQA AALE INGKHKMEGSSVPLVVKWADTEKERQARRAQK
Sbjct: 139 LRGSQQTSKGCAFLKYETKEQAHAALEDINGKHKMEGSSVPLVVKWADTEKERQARRAQK 198
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
AQSQA +PN DSQHPSLFGALPMGYAPPYNGYGYQA G+Y L+ YRL
Sbjct: 199 AQSQA--MPNTDSQHPSLFGALPMGYAPPYNGYGYQAPGAYELVPYRL------------ 244
Query: 255 IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL 314
G PDLS N+ PRNYA P+G++GS YP +PGLQYP+ YPG ++ HRPL
Sbjct: 245 ---------RGGIRPDLSLNISPRNYA--PAGYMGSAYPTMPGLQYPIAYPGAIMSHRPL 293
Query: 315 NNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFG 374
+NSPG++SP V PS PPGANLFIYHIPQEFGDQEL N FQAFG
Sbjct: 294 SNSPGTLSPTV----PSC--------------PPGANLFIYHIPQEFGDQELANTFQAFG 335
Query: 375 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
+VLSAKVFVDKAT VSKCFGFVSY+SPA+AQNAI MMNGCQLGGK LKVQLK+DNKQ+KP
Sbjct: 336 QVLSAKVFVDKATCVSKCFGFVSYDSPAAAQNAITMMNGCQLGGKMLKVQLKKDNKQSKP 395
Query: 435 Y 435
Y
Sbjct: 396 Y 396
>gi|147772817|emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
Length = 450
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/450 (71%), Positives = 357/450 (79%), Gaps = 55/450 (12%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE+ K +K+SE+ VKLFVGQVPK+MTEAQLLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEAPKPRKASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACH-NKKTLPG----------------------------------- 84
VICPSRQEADKAVNACH +K+TLPG
Sbjct: 61 VICPSRQEADKAVNACHSDKRTLPGKHVNISHIGFMWHDAAADAWKIKATIVANENQQRK 120
Query: 85 ------------------ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
ASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS+LFS Y
Sbjct: 121 KCTREHTNFGLRLAFQVSASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFSKY 180
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE
Sbjct: 181 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 240
Query: 187 RQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
RQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGYGYQA G+YGLMQYR+PPM
Sbjct: 241 RQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMPPM 300
Query: 246 QNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYP 305
Q+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + ++GS YPA+PGLQYPM Y
Sbjct: 301 QSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPMAYH 360
Query: 306 GGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQE 365
GG++ H+PL+ SPGS PA+ SN T+S G SGGQ+EGPPGANLFIYHIPQEFGD E
Sbjct: 361 GGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLFIYHIPQEFGDHE 420
Query: 366 LGNAFQAFGRVLSAKVFVDKATGVSKCFGF 395
L +AFQ FGRVLSAKVFVDKATG SKCFG
Sbjct: 421 LAHAFQQFGRVLSAKVFVDKATGASKCFGI 450
>gi|115442121|ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|20160777|dbj|BAB89718.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|20161317|dbj|BAB90241.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113534871|dbj|BAF07254.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|215704529|dbj|BAG94162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189701|gb|EEC72128.1| hypothetical protein OsI_05123 [Oryza sativa Indica Group]
gi|222619840|gb|EEE55972.1| hypothetical protein OsJ_04706 [Oryza sativa Japonica Group]
Length = 460
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 310/425 (72%), Positives = 356/425 (83%), Gaps = 8/425 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHMTEA+LLAMF+E A+VDEV +IKDK T+ASRGCCF+ICPSR+EADKAVN
Sbjct: 40 VKLFVGQVPKHMTEAELLAMFQEVAIVDEVTVIKDKATKASRGCCFLICPSREEADKAVN 99
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A HNK TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG IKDLQI
Sbjct: 100 AYHNKHTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFSKYGNIKDLQI 159
Query: 135 LRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQ 193
LRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQ
Sbjct: 160 LRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQ 219
Query: 194 KAQSQANNLPNAD-SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
KAQ Q++N+P+A Q SLFGAL MGY P YNG+GYQ G+YGLMQY L PMQNQ F
Sbjct: 220 KAQLQSSNMPSASPMQQSSLFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQATFP 279
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPMPYPGGMLGH 311
++ PVNQGN++RG +P+LS N PR++ AM + S YP VPG+QY YPGG++ +
Sbjct: 280 NMVQPVNQGNSIRGVNPELSPNSVPRSFNAMQ----LSSPYPPVPGVQYAGSYPGGLMNN 335
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 371
RP NS S+ + N+N SSS + GGQIEGPPGANLFIYHIPQ++GDQ+L NAFQ
Sbjct: 336 RPFGNSFSSIKVPIVNANSPASSSPSSNPGGQIEGPPGANLFIYHIPQDYGDQDLSNAFQ 395
Query: 372 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN-K 430
FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ AI +MNG QLG KKLKVQLKRDN K
Sbjct: 396 RFGRVLSAKVFVDKATGSSKCFGFVSYDSPASAQAAIGVMNGFQLGSKKLKVQLKRDNSK 455
Query: 431 QNKPY 435
+KP+
Sbjct: 456 HSKPF 460
>gi|326528321|dbj|BAJ93342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 310/428 (72%), Positives = 355/428 (82%), Gaps = 6/428 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
E VKLFVGQVPK MTEA+L AMF++ A+VDEV +I+DK T+ASRGCCF+ICPSR+EAD
Sbjct: 43 DESSVKLFVGQVPKLMTEAELAAMFRDVAIVDEVTVIRDKATKASRGCCFLICPSREEAD 102
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAVNA HNK+TLPGA SPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG IK
Sbjct: 103 KAVNAYHNKRTLPGAPSPLQVKYADGELERLEHKLFIGMLPKNVTDVEMTDLFSQYGNIK 162
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQA
Sbjct: 163 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQA 222
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
R+AQKAQ +N+ NA++ Q SLFGAL MGY PPYNG+GYQ G+YGLMQY L PMQNQ
Sbjct: 223 RKAQKAQYPPSNMSNANAMQQSSLFGALQMGYVPPYNGFGYQPQGTYGLMQYPLSPMQNQ 282
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGM 308
GF ++ PVNQG+++RG S +LS N R++ S +GS YPA PG+QYP YPGG
Sbjct: 283 AGFQNMVQPVNQGSSIRGVSSELSPNSVARSFN---SMQLGSPYPAGPGMQYPGSYPGGG 339
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGN 368
+ RP NS SV AN+ TSSS G+ +G Q+EGPPGANLFIYHIPQEFGDQ+L +
Sbjct: 340 INSRPYMNSHNSVKVPNANATSPTSSSTGSNTGPQLEGPPGANLFIYHIPQEFGDQDLAH 399
Query: 369 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
AFQ+FGRVLSAKVFVDKATG SKCFGFVSY+SPA AQ AI+MMNG QLGGKKLKVQLKRD
Sbjct: 400 AFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNGFQLGGKKLKVQLKRD 459
Query: 429 N-KQNKPY 435
N K NK Y
Sbjct: 460 NSKHNKLY 467
>gi|357129324|ref|XP_003566314.1| PREDICTED: CUGBP Elav-like family member 2-like [Brachypodium
distachyon]
Length = 459
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 306/427 (71%), Positives = 349/427 (81%), Gaps = 6/427 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E VKLFVGQVPK MTEA+L AMF++ A+VDEV +I+DK T+ SRGCCF+ICPSR+EADK
Sbjct: 36 ESSVKLFVGQVPKQMTEAELAAMFRDVAIVDEVTVIRDKATKVSRGCCFLICPSREEADK 95
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
AVNA HNK+TLPGA SPLQVKYADGELERLEHKLFIGMLPKNV++AE++ LFS YG IKD
Sbjct: 96 AVNAYHNKRTLPGAPSPLQVKYADGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKD 155
Query: 132 LQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR
Sbjct: 156 LQILRGSQQTSKAGCAFLKYETKEQAMAAIEALNGKHKIEGSSVPLVVKWADTEKERQAR 215
Query: 191 RAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
+AQKA Q +N+ NA + Q SLFGAL MGY P YNG+GYQ G+YGLMQY L PMQNQ
Sbjct: 216 KAQKAHFQPSNMSNATAMQQNSLFGALQMGYMPQYNGFGYQPQGTYGLMQYPLSPMQNQA 275
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
F ++ PVNQG+++RG + +LS N R++ S +GS YPA PG+QYP YPGG +
Sbjct: 276 AFQNMVQPVNQGSSIRGVNSELSPNSVTRSFN---SMQLGSPYPAAPGMQYPGSYPGGAI 332
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNA 369
RP NS ++ N+ TSSS + G QIEGPPGANLFIYHIPQEFGDQ+L NA
Sbjct: 333 NSRPYMNSHNAIKVPNTNATSPTSSSTSSNPGPQIEGPPGANLFIYHIPQEFGDQDLANA 392
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
FQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ AI+MMNG QLGGKKLKVQLKRDN
Sbjct: 393 FQNFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQAAISMMNGFQLGGKKLKVQLKRDN 452
Query: 430 -KQNKPY 435
K NK Y
Sbjct: 453 SKHNKLY 459
>gi|413951358|gb|AFW84007.1| hypothetical protein ZEAMMB73_397161 [Zea mays]
Length = 455
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 298/419 (71%), Positives = 352/419 (84%), Gaps = 8/419 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHM EA LLA+F+E A VDEV +IKDK T+ SRGCCFVICPSR+EADKAVN
Sbjct: 32 VKLFVGQVPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVN 91
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A HNK+TL GASSPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG + DLQI
Sbjct: 92 AYHNKQTLSGASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFSKYGNVTDLQI 151
Query: 135 LRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQ 193
LRGSQQT+K GCAF+KY+TK+QALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQ
Sbjct: 152 LRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQ 211
Query: 194 KAQSQANNLPNAD--SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
KAQSQ +++PNA QH S+FGAL MGY P YNG+GYQ G+YGLMQY L PMQNQ F
Sbjct: 212 KAQSQLSHIPNASPMQQHSSVFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQGPF 271
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
++ P+NQGN++RG +P++S + R++ AM +GS YPA+PG+QYP YPGG +G
Sbjct: 272 QNMVQPLNQGNSIRGVNPEVSPSSVQRSFNAMQ----LGSPYPAMPGMQYPGSYPGGPMG 327
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 370
+R L NS + +N+N + SSS + +GGQ+EGPPGANLFIYHIPQE+GDQEL +AF
Sbjct: 328 NRHLGNSHNPIKAPNSNANSTVSSSPSSNAGGQVEGPPGANLFIYHIPQEYGDQELSSAF 387
Query: 371 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
Q+FGRV+SAKVFVDKATGVSKCFGFVSY+SPASAQ AI MNG QLGGKKLKVQLKR+N
Sbjct: 388 QSFGRVVSAKVFVDKATGVSKCFGFVSYDSPASAQAAINRMNGYQLGGKKLKVQLKREN 446
>gi|297809825|ref|XP_002872796.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
gi|297318633|gb|EFH49055.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 307/420 (73%), Positives = 351/420 (83%), Gaps = 8/420 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGASS LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGASSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY-QASGSYGLMQYRLPPMQNQPGFHG 253
AQS L NAD +PSLFGALPMGY PPYNGYGY Q G+YG Y LPP+QNQ F
Sbjct: 198 AQSHIARLSNADPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFPN 254
Query: 254 IIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+I NQG NA++G SPD + + RN+ MPP+ ++GSGYPAV G +P YP G++
Sbjct: 255 MIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPANYMGSGYPAVRGHPFPFAYPRGIVS 314
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSG-GTGSGGQIEGPPGANLFIYHIPQEFGDQELGNA 369
RPL++SPGS+SP +ANS ST+ G G S Q EGP GANLFIY+IP+EFGDQEL A
Sbjct: 315 PRPLSSSPGSISPGIANSGMSTTPLGIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAA 374
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
FQ+FG VLSAKVFVDKATGVSKCFGFVSY+S A+AQNAI +MNG LGGKKLKVQLKRDN
Sbjct: 375 FQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDVMNGRHLGGKKLKVQLKRDN 434
>gi|242087741|ref|XP_002439703.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
gi|241944988|gb|EES18133.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
Length = 455
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 303/429 (70%), Positives = 354/429 (82%), Gaps = 8/429 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L A+F+ ALVDEV +I+D+ TR SRGCCFVICPSR+EAD
Sbjct: 31 SRESVKLFVGQVPKQMSEAELAALFRGVALVDEVTVIRDRATRVSRGCCFVICPSREEAD 90
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV A HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV++AE++ LFS YG IK
Sbjct: 91 KAVTAYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTDAEMTDLFSKYGNIK 150
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+EGSSVPLVVKWADTEKERQA
Sbjct: 151 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKERQA 210
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQN 247
R+AQKAQ Q++N+ N ++ Q S+FGAL MGY P YNG+GYQ G+YGLMQY L P+QN
Sbjct: 211 RKAQKAQFQSSNMLNPNAMQQNSVFGALQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQN 270
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
Q F ++ PVNQG+++RGA+ +LS N PR++ S +GS Y +PGLQYP YPGG
Sbjct: 271 QTAFQNMVQPVNQGSSIRGANSELSPNSVPRSFN---SAQLGSPYSPLPGLQYPGVYPGG 327
Query: 308 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
+ HRP +NS S + ++ S SSS + G QIEGPPGANLFIYHIPQEFGD +L
Sbjct: 328 PINHRPFSNSHSS-TKVQNSNANSPSSSPSSNPGPQIEGPPGANLFIYHIPQEFGDHDLA 386
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
NAF +FGRVLSAKVFVDKATGVSKCFGFVSY+SPASAQ AI++MNG QLGGKKLKVQLKR
Sbjct: 387 NAFHSFGRVLSAKVFVDKATGVSKCFGFVSYDSPASAQAAISVMNGYQLGGKKLKVQLKR 446
Query: 428 DN-KQNKPY 435
DN K NKP+
Sbjct: 447 DNSKHNKPF 455
>gi|326489549|dbj|BAK01755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 302/433 (69%), Positives = 344/433 (79%), Gaps = 8/433 (1%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
++ E+ VKLFVGQVPKHMTEA+L AMFK+ A+VDEV +IKDK T+ASRGCCFVICPSR
Sbjct: 24 REREEQSVKLFVGQVPKHMTEAELAAMFKDVAVVDEVTLIKDKATKASRGCCFVICPSRD 83
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EADKAVNA HNK TLPGA+SPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG
Sbjct: 84 EADKAVNAYHNKHTLPGAASPLQVKYADGELERLEHKLFIGMLPKNVADTELTDLFSKYG 143
Query: 128 TIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
IKDLQILRGSQQTSK GCAF+KYE KEQA+AA+E +NGKHK+EGSSVPLVVKWADTEKE
Sbjct: 144 NIKDLQILRGSQQTSKAGCAFIKYEMKEQAVAAIEDLNGKHKIEGSSVPLVVKWADTEKE 203
Query: 187 RQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
RQAR+AQKAQ Q+ N+PN S+FGAL MGY P YNG+ YQ G+YGLMQY L PM
Sbjct: 204 RQARKAQKAQLQSPNMPNGRPMPQSSVFGALQMGYMPQYNGFSYQPPGTYGLMQYPLSPM 263
Query: 246 QNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYP 305
QNQ F + PVNQGN++RG +P+LS N GPR++ +GS YPAVPG+QY YP
Sbjct: 264 QNQGPFQNMGQPVNQGNSIRGVNPELSPNSGPRSFN---PMHLGSPYPAVPGMQYQGSYP 320
Query: 306 GGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG-GQIEGPPGANLFIYHIPQEFGDQ 364
GG + RP N + N N S G G Q EGPPGANLFIYHIPQEFGDQ
Sbjct: 321 GGPMNSRPFGNPHNPLKVPGVNVNSVAFSPRSNGGGQTQTEGPPGANLFIYHIPQEFGDQ 380
Query: 365 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 424
EL +AFQ FGRV+SAKVFVDKATG SKCFGFVSY++P SAQ+AIAMMNG QLGGKKLKVQ
Sbjct: 381 ELSDAFQRFGRVISAKVFVDKATGSSKCFGFVSYDNPVSAQSAIAMMNGFQLGGKKLKVQ 440
Query: 425 LKRD--NKQNKPY 435
LKRD NK +KP+
Sbjct: 441 LKRDNNNKHSKPF 453
>gi|226492020|ref|NP_001152526.1| LOC100286166 [Zea mays]
gi|195657131|gb|ACG48033.1| RNA binding protein [Zea mays]
Length = 463
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 298/429 (69%), Positives = 353/429 (82%), Gaps = 18/429 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHM EA LLA+F+E A VDEV +IKDK T+ SRGCCFVICPSR+EADKAVN
Sbjct: 30 VKLFVGQVPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVN 89
Query: 75 ACHNKKTLPG----------ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS 124
A HNK+TL G ASSPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS
Sbjct: 90 AYHNKQTLSGVCEHTTNLVLASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFS 149
Query: 125 IYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
YG + DLQILRGSQQT+K GCAF+KY+TK+QALAA+EA+NGKHK+EGSSVPLVVKWADT
Sbjct: 150 KYGNVTDLQILRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWADT 209
Query: 184 EKERQARRAQKAQSQANNLPNAD--SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
EKERQAR+AQKAQSQ +++PNA QH S+FGAL MGY P YNG+GYQ +G+YGLMQY
Sbjct: 210 EKERQARKAQKAQSQLSHIPNASPMQQHSSVFGALQMGYMPQYNGFGYQPTGTYGLMQYP 269
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQY 300
L PMQNQ F ++ P+NQGN++RG +P++S + R++ AM +GS YPA+PG+QY
Sbjct: 270 LSPMQNQGPFQNMVQPLNQGNSIRGVNPEVSPSSVQRSFNAMQ----LGSPYPAMPGMQY 325
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQE 360
P YPGG +G+R L NS + +N+N + SSS + +GGQ+EGPPGANLFIYHIPQE
Sbjct: 326 PGSYPGGPMGNRHLGNSHNPIKVPNSNANSTVSSSPSSNAGGQVEGPPGANLFIYHIPQE 385
Query: 361 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 420
+GDQEL +AFQ+FGRV+SAKVFVDKATGVSKCFGFVSY+SPASAQ AI MNG QLGGKK
Sbjct: 386 YGDQELSSAFQSFGRVVSAKVFVDKATGVSKCFGFVSYDSPASAQAAINRMNGYQLGGKK 445
Query: 421 LKVQLKRDN 429
LKVQLKR+N
Sbjct: 446 LKVQLKREN 454
>gi|357126722|ref|XP_003565036.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Brachypodium distachyon]
Length = 450
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/427 (71%), Positives = 343/427 (80%), Gaps = 13/427 (3%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVGQVPKHMTE +LLAMF+E A VDEV +IKDK TRASRGCCF+ICPSR EADKA+NA
Sbjct: 30 KLFVGQVPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINA 89
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
HNK TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV + E++ LFS YG IKDLQIL
Sbjct: 90 YHNKHTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVEDTELTDLFSEYGNIKDLQIL 149
Query: 136 RGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
RGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQK
Sbjct: 150 RGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQK 209
Query: 195 AQSQANNLPNADSQ-HPSLFGALPMGYAP-PYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
AQ + N+PN S+FGAL MGY P YNG+ YQ G+YGLMQY L PMQNQ F
Sbjct: 210 AQLPSPNMPNGGPMPQSSVFGALQMGYLPHQYNGFSYQPPGTYGLMQYPLSPMQNQAAFQ 269
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPMPYPGGMLGH 311
++ P NQGN++RG +P+LS N R++ AM +GS YP VPG+QY YPGG + +
Sbjct: 270 NMVQP-NQGNSIRGVNPELSPNAVSRSFNAM----HLGSPYPGVPGMQYTGSYPGGPMSN 324
Query: 312 RPLNNS--PGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNA 369
RP NS P V A NS + SS G G Q EGPPGANLFIYHIPQEFGDQEL +A
Sbjct: 325 RPFGNSHNPLKVPSANVNSIAYSPSSNGGGQ-TQTEGPPGANLFIYHIPQEFGDQELSDA 383
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
FQ FGRV+SAKVFVDKATG SKCFGFVSY+SPASAQ+AI MMNG QLGGKKLKVQLKRDN
Sbjct: 384 FQRFGRVVSAKVFVDKATGASKCFGFVSYDSPASAQSAIGMMNGFQLGGKKLKVQLKRDN 443
Query: 430 -KQNKPY 435
K +KP+
Sbjct: 444 SKHSKPF 450
>gi|3924594|gb|AAC79095.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|4262139|gb|AAD14439.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|7270181|emb|CAB77796.1| putative ribonucleoprotein [Arabidopsis thaliana]
Length = 492
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/424 (70%), Positives = 346/424 (81%), Gaps = 12/424 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY-QASGSYGLMQYRLPPMQNQPGFHG 253
AQS L N D +PSLFGALPMGY PPYNGYGY Q G+YG Y LPP+QNQ F
Sbjct: 198 AQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFSN 254
Query: 254 IIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+I NQG NA++G SPD + + RN+ MPP ++GSGYPA+ G +P YP G++
Sbjct: 255 MIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVS 314
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 370
RPL++SPGS+SP + ST G S Q EGP GANLFIY+IP+EFGDQEL AF
Sbjct: 315 PRPLSSSPGSISPGM-----STPLGIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAF 369
Query: 371 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 430
Q+FG VLSAKVFVDKATGVSKCFGFVSY+S A+AQNAI MMNG LGGKKLKVQLKRD+
Sbjct: 370 QSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKLKVQLKRDSN 429
Query: 431 QNKP 434
+P
Sbjct: 430 NGQP 433
>gi|413944942|gb|AFW77591.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 456
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 299/429 (69%), Positives = 351/429 (81%), Gaps = 8/429 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L AMF+ ALVDEV +I+D+ TR SRGCCFVICPSR+EAD
Sbjct: 32 SRESVKLFVGQVPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEAD 91
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV+ AE++ LFS YG IK
Sbjct: 92 KAVTTYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTHAEMTDLFSKYGNIK 151
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+EGSSVPLVVKWADTEKERQA
Sbjct: 152 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKERQA 211
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQN 247
R+AQKAQ Q++N+ NA++ Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QN
Sbjct: 212 RKAQKAQFQSSNMLNANAMQQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQN 271
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
Q F ++ PVNQG+++ GA+ ++S N PR++ S +GS Y +PGLQYP YPGG
Sbjct: 272 QAAFQNMVQPVNQGSSIHGANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGG 328
Query: 308 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
+ HRP ++S S + +S S SSS + G QIEGPPGANLFIYHIPQEFGD +L
Sbjct: 329 PINHRPFSSSHSS-TKVQNSSANSPSSSPSSNPGPQIEGPPGANLFIYHIPQEFGDHDLA 387
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
+AF +FGRVLSAKVFVDKATGVSKCFGFVSY+SPASAQ AI++MNG QLGGKKLKVQLKR
Sbjct: 388 SAFHSFGRVLSAKVFVDKATGVSKCFGFVSYDSPASAQAAISVMNGYQLGGKKLKVQLKR 447
Query: 428 DN-KQNKPY 435
DN K +KP+
Sbjct: 448 DNSKHSKPF 456
>gi|18412143|ref|NP_567249.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|21536899|gb|AAM61231.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|222423375|dbj|BAH19660.1| AT4G03110 [Arabidopsis thaliana]
gi|332656872|gb|AEE82272.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 441
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/424 (70%), Positives = 346/424 (81%), Gaps = 12/424 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY-QASGSYGLMQYRLPPMQNQPGFHG 253
AQS L N D +PSLFGALPMGY PPYNGYGY Q G+YG Y LPP+QNQ F
Sbjct: 198 AQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFSN 254
Query: 254 IIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+I NQG NA++G SPD + + RN+ MPP ++GSGYPA+ G +P YP G++
Sbjct: 255 MIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVS 314
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 370
RPL++SPGS+SP + ST G S Q EGP GANLFIY+IP+EFGDQEL AF
Sbjct: 315 PRPLSSSPGSISPGM-----STPLGIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAF 369
Query: 371 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 430
Q+FG VLSAKVFVDKATGVSKCFGFVSY+S A+AQNAI MMNG LGGKKLKVQLKRD+
Sbjct: 370 QSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKLKVQLKRDSN 429
Query: 431 QNKP 434
+P
Sbjct: 430 NGQP 433
>gi|297604406|ref|NP_001055367.2| Os05g0373400 [Oryza sativa Japonica Group]
gi|215707181|dbj|BAG93641.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676313|dbj|BAF17281.2| Os05g0373400 [Oryza sativa Japonica Group]
Length = 466
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/427 (71%), Positives = 348/427 (81%), Gaps = 6/427 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EE VKLFVGQVPK MTE +L AMF A+VDEV +I+DK T+ASRGCCF+ICPSR+EADK
Sbjct: 43 EESVKLFVGQVPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADK 102
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
AVNA HNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV++AE++ LFS YG IKD
Sbjct: 103 AVNAYHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKD 162
Query: 132 LQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR
Sbjct: 163 LQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQAR 222
Query: 191 RAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ
Sbjct: 223 KAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQA 282
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
F ++ VNQG+++RG + +LS N PR++ S +GS Y VP +QYP YPG +
Sbjct: 283 AFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAI 339
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNA 369
RP NS S+ AN++ TSSS + G QIEGPPGANLFIYHIPQEFGDQ+L A
Sbjct: 340 NSRPFVNSHNSMKVPNANASSPTSSSTSSNPGPQIEGPPGANLFIYHIPQEFGDQDLAGA 399
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
FQ FGRVLSAKVFVDKATG+SKCFGF+SY+SPASAQ AI+MMNG QLGGKKLKVQLKRDN
Sbjct: 400 FQGFGRVLSAKVFVDKATGLSKCFGFISYDSPASAQTAISMMNGYQLGGKKLKVQLKRDN 459
Query: 430 -KQNKPY 435
K +K Y
Sbjct: 460 SKHSKTY 466
>gi|357126724|ref|XP_003565037.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Brachypodium distachyon]
Length = 459
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 306/436 (70%), Positives = 343/436 (78%), Gaps = 22/436 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVGQVPKHMTE +LLAMF+E A VDEV +IKDK TRASRGCCF+ICPSR EADKA+NA
Sbjct: 30 KLFVGQVPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINA 89
Query: 76 CHNKKTLPG---------ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
HNK TLPG ASSPLQVKYADGELERLEHKLFIGMLPKNV + E++ LFS Y
Sbjct: 90 YHNKHTLPGVCEHSSLVLASSPLQVKYADGELERLEHKLFIGMLPKNVEDTELTDLFSEY 149
Query: 127 GTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
G IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEK
Sbjct: 150 GNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEK 209
Query: 186 ERQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAP-PYNGYGYQASGSYGLMQYRLP 243
ERQAR+AQKAQ + N+PN S+FGAL MGY P YNG+ YQ G+YGLMQY L
Sbjct: 210 ERQARKAQKAQLPSPNMPNGGPMPQSSVFGALQMGYLPHQYNGFSYQPPGTYGLMQYPLS 269
Query: 244 PMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPM 302
PMQNQ F ++ P NQGN++RG +P+LS N R++ AM +GS YP VPG+QY
Sbjct: 270 PMQNQAAFQNMVQP-NQGNSIRGVNPELSPNAVSRSFNAM----HLGSPYPGVPGMQYTG 324
Query: 303 PYPGGMLGHRPLNNS--PGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQE 360
YPGG + +RP NS P V A NS + SS G G Q EGPPGANLFIYHIPQE
Sbjct: 325 SYPGGPMSNRPFGNSHNPLKVPSANVNSIAYSPSSNGGGQT-QTEGPPGANLFIYHIPQE 383
Query: 361 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 420
FGDQEL +AFQ FGRV+SAKVFVDKATG SKCFGFVSY+SPASAQ+AI MMNG QLGGKK
Sbjct: 384 FGDQELSDAFQRFGRVVSAKVFVDKATGASKCFGFVSYDSPASAQSAIGMMNGFQLGGKK 443
Query: 421 LKVQLKRDN-KQNKPY 435
LKVQLKRDN K +KP+
Sbjct: 444 LKVQLKRDNSKHSKPF 459
>gi|413948822|gb|AFW81471.1| hypothetical protein ZEAMMB73_420516 [Zea mays]
Length = 486
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 295/461 (63%), Positives = 350/461 (75%), Gaps = 40/461 (8%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L+AMF+ ALVDEV +I+D+ TR SRGCCF+ICPSR+EAD
Sbjct: 30 SRESVKLFVGQVPKQMSEAELVAMFRGVALVDEVTVIRDRATRVSRGCCFLICPSREEAD 89
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV A HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV++AE+ LFS YG IK
Sbjct: 90 KAVTAYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTDAEMIDLFSKYGNIK 149
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKME------------------- 170
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+E
Sbjct: 150 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEFRMKDAYRDCNLQTSPISH 209
Query: 171 -------------GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGAL 216
GSSVPLVVKWADTEKERQAR+AQK+ Q++N+ NA++ + S+FGAL
Sbjct: 210 TLDGTSSLHIIVLGSSVPLVVKWADTEKERQARKAQKSPFQSSNMLNANAMRQNSVFGAL 269
Query: 217 PMGYAPPYNGYGYQASGSYGLMQYR-LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNM 275
MGY P YNG+GYQ G+YGLMQY L P+QNQ F ++ P+NQ ++ RGA+ +L ++
Sbjct: 270 QMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQNQAAFQNMVQPINQASSTRGANSELPPDL 329
Query: 276 GPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSS 335
PR++ S +GS Y +PGLQYP YPGG + HRP +NS S N+N +SS
Sbjct: 330 VPRSFN---STQLGSPYSPLPGLQYPGVYPGGPINHRPFSNSHSSTKVQNLNANLPSSSP 386
Query: 336 GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 395
+ QIEGPPGANLFIYHIPQEFGD +L NAF +FGRVLSAKVFVDKATGVSKCFGF
Sbjct: 387 SSNPAP-QIEGPPGANLFIYHIPQEFGDHDLANAFHSFGRVLSAKVFVDKATGVSKCFGF 445
Query: 396 VSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 435
VSY+SPASAQ AI++MNG QLGGKKLKVQLKRDN K +KP+
Sbjct: 446 VSYDSPASAQAAISVMNGYQLGGKKLKVQLKRDNSKHSKPF 486
>gi|218196669|gb|EEC79096.1| hypothetical protein OsI_19721 [Oryza sativa Indica Group]
Length = 555
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 294/431 (68%), Positives = 339/431 (78%), Gaps = 10/431 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EE VKLFVGQVPK MTE +L AMF A+VDEV +I+DK T+ASRGCCF+ICPSR+EADK
Sbjct: 43 EESVKLFVGQVPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADK 102
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
AVNA HNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV++AE++ LFS YG IKD
Sbjct: 103 AVNAYHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKD 162
Query: 132 LQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR
Sbjct: 163 LQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQAR 222
Query: 191 RAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ
Sbjct: 223 KAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQA 282
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
F ++ VNQG+++RG + +LS N PR++ S +GS Y VP +QYP YPG +
Sbjct: 283 AFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAI 339
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNA 369
RP NS S+ AN++ TSSS + G QIEGPPGANLFIYHIPQEFGDQ+L A
Sbjct: 340 NSRPFVNSHNSMKVPNANASSPTSSSTSSNPGPQIEGPPGANLFIYHIPQEFGDQDLAGA 399
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG-----GKKLKVQ 424
FQ FGRVLSAKVFVDKATG+SKCFGF+SY+SPASAQ AI+MMNG QLG G K +
Sbjct: 400 FQGFGRVLSAKVFVDKATGLSKCFGFISYDSPASAQTAISMMNGYQLGERFAQGTKFTQK 459
Query: 425 LKRDNKQNKPY 435
N Q K +
Sbjct: 460 TAARNSQEKTH 470
>gi|22329313|ref|NP_171845.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449591|dbj|BAC41921.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|28950997|gb|AAO63422.1| At1g03457 [Arabidopsis thaliana]
gi|332189452|gb|AEE27573.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 429
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 285/435 (65%), Positives = 332/435 (76%), Gaps = 32/435 (7%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE E +EERVKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF
Sbjct: 1 MAEETME---NEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCF 57
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EV
Sbjct: 58 LTCPTREDADKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQ 117
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H MEG++VPL+VKW
Sbjct: 118 SLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKW 177
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYGY G+YG Y
Sbjct: 178 ADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---Y 231
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMPPSGFVGSGYPAV 295
LPP+Q Q FH +I P NQGN L+ ++ P RN+ P+ GY
Sbjct: 232 MLPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF---PTALGNYGY--- 284
Query: 296 PGLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFI 354
GLQYPM +P GM+ R PL +VSP ++N+ S SS Q EGP GANLFI
Sbjct: 285 HGLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSS------LQTEGPAGANLFI 334
Query: 355 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 414
Y+IP+EF DQEL FQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A+AQNAI MNGC
Sbjct: 335 YNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGC 394
Query: 415 QLGGKKLKVQLKRDN 429
QL GKKLKVQLKRDN
Sbjct: 395 QLSGKKLKVQLKRDN 409
>gi|297848560|ref|XP_002892161.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
gi|297338003|gb|EFH68420.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
Length = 435
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 289/449 (64%), Positives = 330/449 (73%), Gaps = 37/449 (8%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE E +EERVKLFVGQVPKHMTE QLL +F EF++VDEVNIIK+KTTR RGCCF
Sbjct: 1 MAEETME---NEERVKLFVGQVPKHMTEIQLLTLFSEFSIVDEVNIIKEKTTRVPRGCCF 57
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLP 111
+ CPSR+EADK +N HNKKTLPGASSPLQVKYADGE ERL EHKLF+GMLP
Sbjct: 58 LTCPSREEADKVINGFHNKKTLPGASSPLQVKYADGERERLDVLDCSCNPEHKLFVGMLP 117
Query: 112 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
KNVSE EV +LFS YGTIKDLQILRGS QTSKGC FLKYE KEQA+ A+EA+NG+H MEG
Sbjct: 118 KNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYEFKEQAVTAMEALNGRHIMEG 177
Query: 172 SSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQA 231
++VPL+VKWADTE+ERQARR QK QS + D Q+PS+FGALPM Y PPYNGYGY
Sbjct: 178 ANVPLIVKWADTERERQARRLQKVQSHVS---RPDPQNPSMFGALPMAYVPPYNGYGYHV 234
Query: 232 SGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP--PSGFVG 289
G+YG Y LPP+Q QP FH +I P NQGN L+ ++ PR A P+
Sbjct: 235 PGTYG---YMLPPIQTQPAFHNVISP-NQGNGRALLGTALTESVPPRLAARRNFPTALGN 290
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 349
GY GLQYPM +P GM+ RP +VSP ++N+ S S Q EGP G
Sbjct: 291 YGY---HGLQYPMAFPRGMVPPRP---PLTTVSPGISNNGTSIPSL------LQTEGPAG 338
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 409
ANLFIY+IP+EFGDQEL AFQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A+AQNAI
Sbjct: 339 ANLFIYNIPREFGDQELAAAFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAIN 398
Query: 410 MMNGCQLGGKKLKVQLKRDNKQ----NKP 434
MNGCQL GKKLKVQLKRDN Q NKP
Sbjct: 399 TMNGCQLSGKKLKVQLKRDNGQQQQSNKP 427
>gi|42571323|ref|NP_973752.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189453|gb|AEE27574.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 438
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 285/444 (64%), Positives = 332/444 (74%), Gaps = 41/444 (9%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE E +EERVKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF
Sbjct: 1 MAEETME---NEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCF 57
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLP 111
+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERL EHKLF+GMLP
Sbjct: 58 LTCPTREDADKVINSFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLP 117
Query: 112 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
KNVSE EV +LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H MEG
Sbjct: 118 KNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEG 177
Query: 172 SSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQA 231
++VPL+VKWADTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYGY
Sbjct: 178 ANVPLIVKWADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHV 234
Query: 232 SGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMPPSG 286
G+YG Y LPP+Q Q FH +I P NQGN L+ ++ P RN+ P+
Sbjct: 235 PGTYG---YMLPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF---PTA 287
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIE 345
GY GLQYPM +P GM+ R PL +VSP ++N+ S SS Q E
Sbjct: 288 LGNYGY---HGLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSS------LQTE 334
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP GANLFIY+IP+EF DQEL FQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A+AQ
Sbjct: 335 GPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQ 394
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDN 429
NAI MNGCQL GKKLKVQLKRDN
Sbjct: 395 NAINTMNGCQLSGKKLKVQLKRDN 418
>gi|9280669|gb|AAF86538.1|AC002560_31 F21B7.8 [Arabidopsis thaliana]
Length = 440
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/435 (64%), Positives = 328/435 (75%), Gaps = 33/435 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+EERVKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF+ CP+R++AD
Sbjct: 3 NEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDAD 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSA 121
K +N+ HNKKTLPGASSPLQVKYADGELERL EHKLF+GMLPKNVSE EV +
Sbjct: 63 KVINSFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVSETEVQS 122
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H MEG++VPL+VKWA
Sbjct: 123 LFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWA 182
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
DTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYGY G+YG Y
Sbjct: 183 DTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---YM 236
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMPPSGFVGSGYPAVP 296
LPP+Q Q FH +I P NQGN L+ ++ P RN+ P+ GY
Sbjct: 237 LPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF---PTALGNYGY---H 289
Query: 297 GLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSSGGTGSGG-QIEGPPGANLFI 354
GLQYPM +P GM+ R PL +VSP ++N+ S SS T + GP GANLFI
Sbjct: 290 GLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSSLQTEAISLMFSGPAGANLFI 345
Query: 355 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 414
Y+IP+EF DQEL FQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A+AQNAI MNGC
Sbjct: 346 YNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGC 405
Query: 415 QLGGKKLKVQLKRDN 429
QL GKKLKVQLKRDN
Sbjct: 406 QLSGKKLKVQLKRDN 420
>gi|30679366|ref|NP_849294.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|17529054|gb|AAL38737.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|332656873|gb|AEE82273.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 439
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 272/388 (70%), Positives = 316/388 (81%), Gaps = 11/388 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
AQS L N D +PSLFGALPMGY PPYNGYGY G+YG Y LPP+QNQ F +
Sbjct: 198 AQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHPPGTYG---YMLPPIQNQAAFSNM 254
Query: 255 IPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGH 311
I NQG NA++G SPD + + RN+ MPP ++GSGYPA+ G +P YP G++
Sbjct: 255 IAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVSP 314
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 371
RPL++SPGS+SP + ST G S Q EGP GANLFIY+IP+EFGDQEL AFQ
Sbjct: 315 RPLSSSPGSISPGM-----STPLGIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQ 369
Query: 372 AFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+FG VLSAKVFVDKATGVSKCFG +S++
Sbjct: 370 SFGIVLSAKVFVDKATGVSKCFGKLSFD 397
>gi|413944941|gb|AFW77590.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 435
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/387 (68%), Positives = 313/387 (80%), Gaps = 7/387 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L AMF+ ALVDEV +I+D+ TR SRGCCFVICPSR+EAD
Sbjct: 32 SRESVKLFVGQVPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEAD 91
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV+ AE++ LFS YG IK
Sbjct: 92 KAVTTYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTHAEMTDLFSKYGNIK 151
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+EGSSVPLVVKWADTEKERQA
Sbjct: 152 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKERQA 211
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQN 247
R+AQKAQ Q++N+ NA++ Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QN
Sbjct: 212 RKAQKAQFQSSNMLNANAMQQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQN 271
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
Q F ++ PVNQG+++ GA+ ++S N PR++ S +GS Y +PGLQYP YPGG
Sbjct: 272 QAAFQNMVQPVNQGSSIHGANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGG 328
Query: 308 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
+ HRP ++S S + +S S SSS + G QIEGPPGANLFIYHIPQEFGD +L
Sbjct: 329 PINHRPFSSSHSS-TKVQNSSANSPSSSPSSNPGPQIEGPPGANLFIYHIPQEFGDHDLA 387
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFG 394
+AF +FGRVLSAKVFVDKATGVSKCFG
Sbjct: 388 SAFHSFGRVLSAKVFVDKATGVSKCFG 414
>gi|222631366|gb|EEE63498.1| hypothetical protein OsJ_18314 [Oryza sativa Japonica Group]
Length = 492
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 267/408 (65%), Positives = 312/408 (76%), Gaps = 13/408 (3%)
Query: 38 FALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94
F ++D++ D R + GCCF+ICPSR+EADKAVNA HNK+TLPGASSPLQVKYA
Sbjct: 3 FLILDQLVHHFDLDLRCTGPFAGCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYA 62
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETK 153
DGELERLEHKLFIGMLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETK
Sbjct: 63 DGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETK 122
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSL 212
EQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SL
Sbjct: 123 EQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSL 182
Query: 213 FGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLS 272
FGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS
Sbjct: 183 FGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELS 242
Query: 273 SNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPST 332
N PR++ S +GS Y VP +QYP YPG + RP NS S+ AN++ T
Sbjct: 243 PNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSMKVPNANASSPT 299
Query: 333 SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 392
SSS + G QIEGPPGANLFIYHIPQEFGDQ+L AFQ FGRVLSAKVFVDKATG+SKC
Sbjct: 300 SSSTSSNPGPQIEGPPGANLFIYHIPQEFGDQDLAGAFQGFGRVLSAKVFVDKATGLSKC 359
Query: 393 FGFVSYESPASAQNAIAMMNGCQLG-----GKKLKVQLKRDNKQNKPY 435
FGF+SY+SPASAQ AI+MMNG QLG G K + N Q K +
Sbjct: 360 FGFISYDSPASAQTAISMMNGYQLGERFAQGTKFTQKTAARNSQEKTH 407
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 13 ERV--KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
ER+ KLF+G +PK++T+A++ +F ++ + ++ I++ + GC F+ ++++A
Sbjct: 67 ERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAL 126
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGML-PKNVSEAEVSALFSIYGTI 129
A+ A + K + G+S PL VK+AD E ER K P N+S S++G +
Sbjct: 127 AAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAM 186
Query: 130 K 130
+
Sbjct: 187 Q 187
>gi|168043683|ref|XP_001774313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674305|gb|EDQ60815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/428 (57%), Positives = 301/428 (70%), Gaps = 32/428 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ VKLFVGQ+PK M+E QL+ +F E V+E+NIIKDK T+ SRGCCF+ +RQEADKA
Sbjct: 14 DSVKLFVGQLPKQMSEQQLVEIFSEAGTVNEINIIKDKLTKLSRGCCFLTYTTRQEADKA 73
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ HNK+TL +SPLQVKYADGE+ERLEHKLFIGMLPK S+A+V+A+FS YGTIK+L
Sbjct: 74 IEIFHNKRTLQPVASPLQVKYADGEMERLEHKLFIGMLPKAASKADVTAVFSQYGTIKEL 133
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+++GSQ TSKGCAFLKYETKEQA+AA+EA+NG HKMEGS LVVKWADTEKERQAR+
Sbjct: 134 SVIKGSQPTSKGCAFLKYETKEQAVAAIEALNGVHKMEGSPSALVVKWADTEKERQARKV 193
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYA---PPYNGYGYQASGSYGLMQYRLPPMQNQP 249
QKAQS ++ P PS+FGA+PMGY PPYNGY YQ +Y M Y QP
Sbjct: 194 QKAQSVSS--PPIPGHQPSIFGAVPMGYVTTPPPYNGYSYQPMSNYA-MAY-----PQQP 245
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA-MPPSGFVGSGYPAVPGLQYPMPYPGGM 308
G G+ A+ G D+++ YA M P+ F QYP PY G M
Sbjct: 246 GMVGL------PTAIPGTQSDMTA------YAPMQPTTF------PFGAQQYPNPYQGQM 287
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSG-GTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
+GH+ + P ++P + +N +++ T G Q EGP GANLFIYHIP EFGD EL
Sbjct: 288 MGHQG-QSYPSPIAPLIGMNNAQAAAAAVRTSVGPQTEGPAGANLFIYHIPPEFGDDELS 346
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
AF +FG V+SAKVFVDK TG SKCFGFVSY++P +AQ AI +MNG QL GK+LKVQLKR
Sbjct: 347 TAFSSFGNVISAKVFVDKTTGASKCFGFVSYDTPDAAQAAINVMNGFQLSGKRLKVQLKR 406
Query: 428 DNKQNKPY 435
D KQ+KPY
Sbjct: 407 DTKQSKPY 414
>gi|302786984|ref|XP_002975262.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
gi|300156836|gb|EFJ23463.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
Length = 427
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/436 (55%), Positives = 308/436 (70%), Gaps = 20/436 (4%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
K + + VKLFVGQ+PKH+T+ +LL +F+E V ++NIIKDK+T+ SRGCCF+ SR
Sbjct: 4 KSKAPDAVKLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRS 63
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EAD A++ HNKKT+ +SP+QVKYADGELERLEHKLFIGMLPK+V+EAEV +FS YG
Sbjct: 64 EADNAIDLFHNKKTISPMNSPMQVKYADGELERLEHKLFIGMLPKSVTEAEVRDVFSEYG 123
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
IK+LQ+++GSQQT+K CAFLKYET+E+A A+EA+NG ++MEG+S LVVKWADTEKER
Sbjct: 124 NIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYRMEGASSALVVKWADTEKER 183
Query: 188 QARRAQKAQ--SQANN--LPNADSQHP--SLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
QAR+ QK+Q S A N L Q P + FG LP+ P +NG+ YQAS +YG++ Y
Sbjct: 184 QARKMQKSQTLSPATNGALAAPLPQQPASASFGPLPLA-TPQFNGFAYQAS-TYGIVPYP 241
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSN-MGPRNYAMPPSGFVGSGYPAVPGLQY 300
+QNQP G+ Q ++ G D+ S + P + P+G+V S + V G QY
Sbjct: 242 ASSLQNQPLISGMTTGTTQ--SLPGTLSDIGSGVLTP----VQPAGYVNSAFSNVAGRQY 295
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGS-GGQIEGPPGANLFIYHIPQ 359
P+ Y G +LG G+ + AV N + + S Q EGPPGANLFIYHIP
Sbjct: 296 PLAYQGALLGQA----YAGATTTAVVGYNSTPVAPKAKASITPQAEGPPGANLFIYHIPA 351
Query: 360 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 419
EFGD EL AF +FG V+SAKVFVDK TG+SKCFGFVSY+SP +AQ+AI +MNG QL GK
Sbjct: 352 EFGDSELSTAFASFGNVISAKVFVDKTTGISKCFGFVSYDSPEAAQSAINVMNGFQLSGK 411
Query: 420 KLKVQLKRDNKQNKPY 435
+LKVQLKRDNK NKPY
Sbjct: 412 RLKVQLKRDNKPNKPY 427
>gi|302811484|ref|XP_002987431.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
gi|300144837|gb|EFJ11518.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
Length = 428
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/438 (55%), Positives = 306/438 (69%), Gaps = 23/438 (5%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
K + + VKLFVGQ+PKH+T+ +LL +F+E V ++NIIKDK+T+ SRGCCF+ SR
Sbjct: 4 KSKAPDAVKLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRS 63
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EAD A++ HNKKT+ +SP+QVKYADGELERLEHKLFIGMLPK+V+EAEV +FS YG
Sbjct: 64 EADNAIDLFHNKKTISPMNSPMQVKYADGELERLEHKLFIGMLPKSVTEAEVRDVFSEYG 123
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
IK+LQ+++GSQQT+K CAFLKYET+E+A A+EA+NG ++MEG+S LVVKWADTEKER
Sbjct: 124 NIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYRMEGASSALVVKWADTEKER 183
Query: 188 QARRAQKAQ--SQANN------LPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
QAR+ QK+Q S A N LP S FG LP+ P +NG+ YQAS +YG++
Sbjct: 184 QARKMQKSQTLSPATNGALAAPLPGQQPASAS-FGPLPLA-TPQFNGFAYQAS-TYGIVP 240
Query: 240 YRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSN-MGPRNYAMPPSGFVGSGYPAVPGL 298
Y +QNQP G+ Q + G D+ S + P + P+G+V S + V G
Sbjct: 241 YPASSLQNQPLISGMTTGTTQ--PLPGTLSDIGSGVLTP----VQPAGYVNSAFSNVAGR 294
Query: 299 QYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGS-GGQIEGPPGANLFIYHI 357
QYP+ Y G +LG G+ + AV N + + S Q EGPPGANLFIYHI
Sbjct: 295 QYPLAYQGALLGQA----YAGATTTAVVGYNSTPVAPKAKASITPQAEGPPGANLFIYHI 350
Query: 358 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 417
P EFGD EL AF +FG V+SAKVFVDK TG+SKCFGFVSY+SP +AQ+AI +MNG QL
Sbjct: 351 PAEFGDSELSTAFASFGNVISAKVFVDKTTGISKCFGFVSYDSPEAAQSAINVMNGFQLS 410
Query: 418 GKKLKVQLKRDNKQNKPY 435
GK+LKVQLKRDNK NKPY
Sbjct: 411 GKRLKVQLKRDNKPNKPY 428
>gi|168002776|ref|XP_001754089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694643|gb|EDQ80990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/447 (54%), Positives = 299/447 (66%), Gaps = 55/447 (12%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ VKLFVGQ+PK M+E QL+ +F E V E+NIIKDK T+ SRGCCF+ +RQEADKA
Sbjct: 14 DSVKLFVGQLPKQMSEQQLVEVFSEAGTVHEINIIKDKLTKQSRGCCFLTYTTRQEADKA 73
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ HNK+TL +SPLQVKYADGE+ERLEHKLFIGMLPK S+A+V A+FS YG+IK+L
Sbjct: 74 IEIFHNKRTLQPVASPLQVKYADGEMERLEHKLFIGMLPKGASKADVMAVFSPYGSIKEL 133
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+++GSQ TSKGCAFLKYETKEQA+AA+EA+NG H+MEGS LVVKWADTEKERQAR+
Sbjct: 134 SVIKGSQPTSKGCAFLKYETKEQAIAAIEALNGVHRMEGSPSALVVKWADTEKERQARKV 193
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYA---PPYNGYGYQASGSYGLMQYRLPPMQN-- 247
QKAQS ++ P Q PS+FGA+PMGY PPYNGY YQ L+Q P+ N
Sbjct: 194 QKAQSVSS--PPIPGQQPSIFGAVPMGYVTAPPPYNGYPYQP-----LVQ----PISNYA 242
Query: 248 -----QPGFHGIIPPVNQGNAMRGASPDLSSN--MGPRNYAMPPSGFVGSGYPAVPGLQY 300
QPG G+ A+ G+ DL++ M P Y G QY
Sbjct: 243 IAYPQQPGMVGL------PTAIPGSQSDLTAYAPMQPATYPF-------------AGQQY 283
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQ------------IEGPP 348
P+PY G ++GH+ + P + P++ N + ++ Q + GP
Sbjct: 284 PVPYQGQIIGHQG-QSYPSPLPPSLIGMNTAQVAAAAIVHFVQFPTSVQAVCVLYLAGPA 342
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
GANLFIYHIP EFGDQEL AF +FG V+SAKVFVDK TG SKCFGFVSY++P +AQ AI
Sbjct: 343 GANLFIYHIPPEFGDQELSTAFSSFGNVISAKVFVDKTTGASKCFGFVSYDTPEAAQAAI 402
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+MNG QL GK+LKVQLKRD KQ KPY
Sbjct: 403 NVMNGFQLSGKRLKVQLKRDTKQRKPY 429
>gi|115473901|ref|NP_001060549.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|33354192|dbj|BAC81150.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|50510234|dbj|BAD31432.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|113612085|dbj|BAF22463.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|215713561|dbj|BAG94698.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/426 (52%), Positives = 289/426 (67%), Gaps = 17/426 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ERV+LFVGQVP+ M E +LA+ + A D+ +I+D+ T ASRGCCFV+C SR+EADKA
Sbjct: 10 ERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEADKA 69
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+ A HNK TLPGAS +QVKYADGELERL E KLFIGMLP++V E EVSALFS YG I+
Sbjct: 70 IAAYHNKCTLPGASRAMQVKYADGELERLAAEQKLFIGMLPRDVKENEVSALFSQYGNIR 129
Query: 131 DLQILRGSQQTSKG--CAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKER 187
L++LR Q+T K CA L++ +KE A AA+EA+NG + GSS LVVK ADTE+E+
Sbjct: 130 QLKVLRSPQKTRKAAACAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREK 189
Query: 188 QARRAQKAQSQANNLPNADSQHPSLF---GALPMGYAPPYNGYGYQASGSYGLMQYRLPP 244
QAR+AQKAQ+Q + P P L GA M + PPYN Y+ G YG + L
Sbjct: 190 QARKAQKAQAQPSK-PLRFYLFPQLLSISGAPQMSFLPPYNVLDYKVPGHYGHTKNPLAL 248
Query: 245 MQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPR-NYAMPPSGFVGSGYPAVPGLQYPMP 303
+ + P VNQGN ++G + ++ P+ + + +G++ YP + GL YP+
Sbjct: 249 ------YSTMYPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGYIQPPYPDLSGLHYPVS 302
Query: 304 YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGD 363
Y G ++G P S G V+ ++SN SS+ T G +IEGPP ANLF+Y IPQE+GD
Sbjct: 303 YAGALVGDTPQYFSDGKVNIPNSHSN-HASSAANTKIGSKIEGPPRANLFVYDIPQEYGD 361
Query: 364 QELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV 423
++L N FQ FGR+LS KVF+D+ATGVSKCFGFVSY++PASAQ AI MNG Q+GGK LKV
Sbjct: 362 EDLANLFQEFGRILSTKVFIDRATGVSKCFGFVSYDTPASAQAAIRRMNGSQIGGKMLKV 421
Query: 424 QLKRDN 429
QLKR+
Sbjct: 422 QLKRET 427
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETK 153
DGE +LF+G +P++++E ++ A+ D ++R + S+GC F+ ++
Sbjct: 4 DGEDGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSR 63
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
E+A A+ A + K + G+S + VK+AD E ER A
Sbjct: 64 EEADKAIAAYHNKCTLPGASRAMQVKYADGELERLA 99
>gi|218200205|gb|EEC82632.1| hypothetical protein OsI_27223 [Oryza sativa Indica Group]
gi|222637626|gb|EEE67758.1| hypothetical protein OsJ_25469 [Oryza sativa Japonica Group]
Length = 497
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 298/490 (60%), Gaps = 75/490 (15%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ERV+LFVGQVP+ M E +LA+ + A D+ +I+D+ T ASRGCCFV+C SR+EADKA
Sbjct: 10 ERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEADKA 69
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+ A HNK TLPGAS +QVKYADGELERL E KLFIGMLP++V E EVSALFS YG I+
Sbjct: 70 IAAYHNKCTLPGASRAMQVKYADGELERLAAEQKLFIGMLPRDVKENEVSALFSQYGNIR 129
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKERQA 189
L++LR Q+T K CA L++ +KE A AA+EA+NG + GSS LVVK ADTE+E+QA
Sbjct: 130 QLKVLRSPQKTRKACAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREKQA 189
Query: 190 RRAQKAQSQANNLPNADSQHPSLF---GALPMGYAPPYNGYGYQASGSY-----GLM--- 238
R+AQKAQ+Q + P P L GA M + PPYN Y+ G+ LM
Sbjct: 190 RKAQKAQAQPSK-PLRFYLFPQLLSISGAPQMSFLPPYNVLDYKTEGTTDPELKDLMKMT 248
Query: 239 -------------------------------QYRLPPMQNQ----------------PGF 251
Q+ L P+++ PG
Sbjct: 249 NDKLEMLVTELKSVVNLLENRVTYNDPIQPIQHSLLPVEHDEKQYKPNECDSKTLEVPGH 308
Query: 252 HG-----------IIPPVNQGNAMRGASPDLSSNMGPR-NYAMPPSGFVGSGYPAVPGLQ 299
+G + P VNQGN ++G + ++ P+ + + +G++ YP + GL
Sbjct: 309 YGHTKNPLALYSTMYPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGYIQPPYPDLSGLH 368
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQ 359
YP+ Y G ++G P S G V+ ++SN SS+ T G +IEGPP ANLF+Y IPQ
Sbjct: 369 YPVSYAGALVGDTPQYFSDGKVNIPNSHSN-HASSAANTKIGSKIEGPPRANLFVYDIPQ 427
Query: 360 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 419
E+GD++L N FQ FGR+LS KVF+D+ATGVSKCFGFVSY++PASAQ AI MNG Q+GGK
Sbjct: 428 EYGDEDLANLFQEFGRILSTKVFIDRATGVSKCFGFVSYDTPASAQAAIRRMNGSQIGGK 487
Query: 420 KLKVQLKRDN 429
LKVQLKR+
Sbjct: 488 MLKVQLKRET 497
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETK 153
DGE +LF+G +P++++E ++ A+ D ++R + S+GC F+ ++
Sbjct: 4 DGEDGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSR 63
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
E+A A+ A + K + G+S + VK+AD E ER A
Sbjct: 64 EEADKAIAAYHNKCTLPGASRAMQVKYADGELERLA 99
>gi|49328140|gb|AAT58838.1| unknown protein, contains RNA recognition motif,PF00076 [Oryza
sativa Japonica Group]
Length = 381
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/323 (63%), Positives = 243/323 (75%), Gaps = 8/323 (2%)
Query: 38 FALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94
F ++D++ D R + GCCF+ICPSR+EADKAVNA HNK+TLPGASSPLQVKYA
Sbjct: 42 FLILDQLVHHFDLDLRCTGPFAGCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYA 101
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETK 153
DGELERLEHKLFIGMLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETK
Sbjct: 102 DGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETK 161
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSL 212
EQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SL
Sbjct: 162 EQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSL 221
Query: 213 FGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLS 272
FGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS
Sbjct: 222 FGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELS 281
Query: 273 SNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPST 332
N PR++ S +GS Y VP +QYP YPG + RP NS S+ AN++ T
Sbjct: 282 PNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSMKVPNANASSPT 338
Query: 333 SSSGGTGSGGQIEGPPGANLFIY 355
SSS + G QIEG + FIY
Sbjct: 339 SSSTSSNPGPQIEGLSSWSQFIY 361
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G +PK++T+A++ +F ++ + ++ I++ + GC F+ ++++A A+ A
Sbjct: 111 KLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEA 170
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGML-PKNVSEAEVSALFSIYGTIK 130
+ K + G+S PL VK+AD E ER K P N+S S++G ++
Sbjct: 171 LNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQ 226
>gi|327493207|gb|AEA86310.1| RNA-binding protein [Solanum nigrum]
Length = 187
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 168/188 (89%), Gaps = 1/188 (0%)
Query: 53 RASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPK 112
RASRGCCFVICPSR+EA+KA+ ACHNK+TLPGASSPLQVKYADG LERLEHKLF+GMLPK
Sbjct: 1 RASRGCCFVICPSREEANKAITACHNKQTLPGASSPLQVKYADGVLERLEHKLFVGMLPK 60
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
NVS+ EVS+LFS YGTI DLQILRGSQQ S+G AFLKYE KEQA+AA+EA+NGKH MEG+
Sbjct: 61 NVSDLEVSSLFSQYGTITDLQILRGSQQASRGYAFLKYEKKEQAIAAVEALNGKHTMEGA 120
Query: 173 SVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQAS 232
+VPLVVKWADTE+ERQARR QKA SQA+N N+ QHPSL+G+L MGY PPYNGY YQ
Sbjct: 121 TVPLVVKWADTERERQARRTQKALSQASNASNS-GQHPSLYGSLSMGYMPPYNGYAYQTP 179
Query: 233 GSYGLMQY 240
G+YGLMQY
Sbjct: 180 GTYGLMQY 187
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK++++ ++ ++F ++ + ++ I++ + +ASRG F+ +++A AV A
Sbjct: 52 KLFVGMLPKNVSDLEVSSLFSQYGTITDLQILRG-SQQASRGYAFLKYEKKEQAIAAVEA 110
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
+ K T+ GA+ PL VK+AD E ER
Sbjct: 111 LNGKHTMEGATVPLVVKWADTERER 135
>gi|388511171|gb|AFK43647.1| unknown [Medicago truncatula]
Length = 218
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 166/222 (74%), Positives = 185/222 (83%), Gaps = 6/222 (2%)
Query: 216 LPMGYAPPYNGYGYQASGSYGLMQYRLPP-MQNQPGFHGIIPPVNQGNAMRGASPDLSSN 274
+PMGY PPYNGYGYQA GSYGLM YR+PP MQNQPG+H ++P +NQGNA+R PDL N
Sbjct: 1 MPMGYVPPYNGYGYQAPGSYGLMPYRMPPPMQNQPGYHNMMPHMNQGNALR---PDLGPN 57
Query: 275 MGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS 334
M PRNY +PP+ +VGS YPAVPGLQ+PM YPGGM+ RPLN+ PGSV P+ N N +TSS
Sbjct: 58 MNPRNYHVPPASYVGS-YPAVPGLQHPMAYPGGMISPRPLNSPPGSVLPSGGNGNSATSS 116
Query: 335 SGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 393
SGG Q EGPPGANLFIYHIPQEFGDQEL NAFQ FGRVLSAKVFVDKATGVSKCF
Sbjct: 117 GSSKNSGGGQAEGPPGANLFIYHIPQEFGDQELANAFQPFGRVLSAKVFVDKATGVSKCF 176
Query: 394 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
GFVSY+SP +AQ+AI+MMNGCQLGGKKLKVQ KRDNK KPY
Sbjct: 177 GFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKPGKPY 218
>gi|270013480|gb|EFA09928.1| hypothetical protein TcasGA2_TC012080 [Tribolium castaneum]
Length = 469
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/439 (40%), Positives = 255/439 (58%), Gaps = 37/439 (8%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++++ + +K+FVGQVP+ M E L MF+E+ V +N+++DKTT AS+GCCFV +
Sbjct: 59 EQEQPDSDTIKMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFT 118
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K + E +V LFS
Sbjct: 119 RKAALQAQDALHNVKTLNGMHHPIQMKPADSE-NRNERKLFVGMLSKKLCENDVRTLFSG 177
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YGTI++ +LR + SKGCAF+ + +K+ AL+A++A++ MEG S PLVVK+ADT+K
Sbjct: 178 YGTIEECTVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQTMEGCSAPLVVKFADTQK 237
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR---- 241
E++ +R Q+ Q+ N A S P ++P + + S L+Q
Sbjct: 238 EKELKRQQQIQANVWNALAAPQLQTS-----PQQFSPVLSN----DATSLQLLQAMSGGS 288
Query: 242 -LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSG----YPAVP 296
L P Q G ++ P+ N + L++ P + + +G G
Sbjct: 289 ALLPQQLLTGAENLLAPLGVQNLVT-----LAAMSQPTAAPLCVANLLGKGAGVERTLTT 343
Query: 297 GLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYH 356
GLQ M ++ GS+ +N + +++ +G QIEGP G NLFIYH
Sbjct: 344 GLQTGMSTSDL--------STYGSLI-----TNATLNAAAIAAAGKQIEGPDGCNLFIYH 390
Query: 357 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416
+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++ SAQ AIA MNG Q+
Sbjct: 391 LPQEFTDTDLASTFLPFGPVISAKVFIDKQTNLSKCFGFVSFDNATSAQQAIAAMNGFQI 450
Query: 417 GGKKLKVQLKRDNKQNKPY 435
G K+LKVQLKR +KPY
Sbjct: 451 GTKRLKVQLKRAKDASKPY 469
>gi|91090137|ref|XP_976135.1| PREDICTED: similar to arrest CG31762-PC isoform 4 [Tribolium
castaneum]
Length = 494
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 176/439 (40%), Positives = 255/439 (58%), Gaps = 37/439 (8%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++++ + +K+FVGQVP+ M E L MF+E+ V +N+++DKTT AS+GCCFV +
Sbjct: 84 EQEQPDSDTIKMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFT 143
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K + E +V LFS
Sbjct: 144 RKAALQAQDALHNVKTLNGMHHPIQMKPADSE-NRNERKLFVGMLSKKLCENDVRTLFSG 202
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YGTI++ +LR + SKGCAF+ + +K+ AL+A++A++ MEG S PLVVK+ADT+K
Sbjct: 203 YGTIEECTVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQTMEGCSAPLVVKFADTQK 262
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR---- 241
E++ +R Q+ Q+ N A S P ++P + + S L+Q
Sbjct: 263 EKELKRQQQIQANVWNALAAPQLQTS-----PQQFSPVLSN----DATSLQLLQAMSGGS 313
Query: 242 -LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSG----YPAVP 296
L P Q G ++ P+ N + L++ P + + +G G
Sbjct: 314 ALLPQQLLTGAENLLAPLGVQNLVT-----LAAMSQPTAAPLCVANLLGKGAGVERTLTT 368
Query: 297 GLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYH 356
GLQ M ++ GS+ +N + +++ +G QIEGP G NLFIYH
Sbjct: 369 GLQTGMSTSDL--------STYGSLI-----TNATLNAAAIAAAGKQIEGPDGCNLFIYH 415
Query: 357 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416
+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++ SAQ AIA MNG Q+
Sbjct: 416 LPQEFTDTDLASTFLPFGPVISAKVFIDKQTNLSKCFGFVSFDNATSAQQAIAAMNGFQI 475
Query: 417 GGKKLKVQLKRDNKQNKPY 435
G K+LKVQLKR +KPY
Sbjct: 476 GTKRLKVQLKRAKDASKPY 494
>gi|255636493|gb|ACU18585.1| unknown [Glycine max]
Length = 161
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/160 (88%), Positives = 149/160 (93%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E K SEE VKLFVGQVPK M E ++LAMFKEFALVDEVNII+DK +RA RGCCF
Sbjct: 2 MAEGKEESKFSEESVKLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRAPRGCCF 61
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS
Sbjct: 62 VICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVS 121
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
LFS+YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL
Sbjct: 122 DLFSMYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 161
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEA 162
KLF+G +PK ++E EV A+F + + ++ I+R + + +GC F+ ++E+A A+ A
Sbjct: 17 KLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRAPRGCCFVICPSREEADKAVNA 76
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
+ K + G+S PL VK+AD E ER
Sbjct: 77 CHNKKTLPGASSPLQVKYADGELER 101
>gi|28574145|ref|NP_788039.1| bruno-2, isoform D [Drosophila melanogaster]
gi|442627591|ref|NP_001260410.1| bruno-2, isoform K [Drosophila melanogaster]
gi|28380348|gb|AAO41184.1| bruno-2, isoform D [Drosophila melanogaster]
gi|440213740|gb|AGB92945.1| bruno-2, isoform K [Drosophila melanogaster]
Length = 737
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/458 (40%), Positives = 255/458 (55%), Gaps = 48/458 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
Q+ + N P+ A + P++ A + APP G + + S +P +Q Q
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG---RTNPSMAAALAAVPQVQ-Q 527
Query: 249 PGFHGIIP----PVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS-------------- 290
G P P+N A+ S L+ N+ N A + +
Sbjct: 528 AGSAATAPTTLVPLNSTTAL---SASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQL 584
Query: 291 -----GYPAVPGLQYP------MPYPGGMLGHRPLNNSP--GSVSPAVANSNPSTSSSGG 337
GY P P PY + G L N G+ S V S +++G
Sbjct: 585 YQQLHGYGLSPAHYLPGPPNAADPYSSSLSG---LTNGAAYGAASQPVTTSALQAAAAGV 641
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
TG QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVS
Sbjct: 642 TGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVS 699
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 700 YDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 737
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
>gi|410921166|ref|XP_003974054.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 3 [Takifugu
rubripes]
Length = 491
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 176/440 (40%), Positives = 246/440 (55%), Gaps = 39/440 (8%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q FG A P++ Y +S ++ LMQ + M G
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQQQAAIMAASHGG 297
Query: 252 H---GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGF----VGSGYPAVPGLQYPMPY 304
+ + P Q + M GA L+ N P P SG AVP + P+
Sbjct: 298 YLTPSVAFPATQIHQM-GA---LNINSLPPTPMTPVSGLSSPPANITTSAVPSIVTPIVN 353
Query: 305 PGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGG---------QIEGPPGANLFIY 355
+ H+P N P +V N P S+ T + Q GP G NLFIY
Sbjct: 354 GFTGIPHQP-NGHP-AVETMYTNGLPPYSTQSPTAADTLQQAFTGVQQYTGPEGCNLFIY 411
Query: 356 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 415
H+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q
Sbjct: 412 HLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQ 471
Query: 416 LGGKKLKVQLKRDNKQNKPY 435
+G K+LKVQLKR ++PY
Sbjct: 472 IGMKRLKVQLKRPKDASRPY 491
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 398
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 399 ESPASAQNAI 408
ES AQNA+
Sbjct: 130 ESAIKAQNAL 139
>gi|432853509|ref|XP_004067742.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Oryzias
latipes]
Length = 489
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 247/442 (55%), Gaps = 44/442 (9%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 74 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 133
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 134 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 193
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 194 CTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQTMPGASSSLVVKFADTDKERTIRR 253
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q FG A P++ Y +S ++ LMQ + M G
Sbjct: 254 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQQQAAIMAASHG- 295
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFV---GSGYP------AVPGLQYP 301
G + P A + MGP N ++PP+ G P AVP + P
Sbjct: 296 -GYLTPSVAFPATQ------IHQMGPLNINSLPPTPMTPVSGDSPPANITTSAVPSIVTP 348
Query: 302 MPYPGGMLGHRPLNNSPGSVS------PAVANSNPSTSSSGGTGSGG--QIEGPPGANLF 353
+ + H+P N P + P + +P+ + + G Q GP G NLF
Sbjct: 349 IVNGFTGIPHQP-NGHPAVETVYTNGLPPYSTQSPNAADTLQQAFTGVQQYTGPEGCNLF 407
Query: 354 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 413
IYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG
Sbjct: 408 IYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNG 467
Query: 414 CQLGGKKLKVQLKRDNKQNKPY 435
Q+G K+LKVQLKR ++PY
Sbjct: 468 FQIGMKRLKVQLKRPKDASRPY 489
>gi|212286102|ref|NP_001131056.1| CUGBP, Elav-like family member 5 [Xenopus laevis]
gi|197359138|gb|ACH69785.1| RNA binding protein Bruno-like 5 [Xenopus laevis]
Length = 484
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 250/462 (54%), Gaps = 60/462 (12%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 44 DAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKA 103
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE EV+++F +G+I++
Sbjct: 104 QTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEEC 163
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA++A++G M G+S LVVK+ADT+KER RR
Sbjct: 164 SVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRM 223
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ Q PSL ALP+ PY+ Y + LMQ + + G +
Sbjct: 224 QQMVGQLGIF------TPSL--ALPIS---PYSAY------AQALMQQQTTVLSTSHGSY 266
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------- 302
+ P V + ++ N P P SG G AVPGL P+
Sbjct: 267 -LSPSVAFPSCHIQQIGAVNLNGLPAAPITPASGLHSPPVIGTAAVPGLVAPLTNGFPGL 325
Query: 303 -PYPGGMLGHRPLNN-SPGSVSPAVANSNPSTSSSGGTGSG------------------- 341
P+P H L+ S+ P A S + S + +G
Sbjct: 326 VPFPS---SHPALDTIYTNSIVPYPAQSPLTVESLHPSFTGVQQYSAIYPTATLTPVTHS 382
Query: 342 --------GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 393
Q EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCF
Sbjct: 383 TPQPPPILQQREGPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCF 442
Query: 394 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
GFVS+++P+SAQ AI MNG Q+G K+LKVQLKR +PY
Sbjct: 443 GFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDTTQPY 484
>gi|301776386|ref|XP_002923617.1| PREDICTED: CUGBP Elav-like family member 5-like [Ailuropoda
melanoleuca]
Length = 418
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 242/442 (54%), Gaps = 47/442 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 65 QTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 125 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 185 QQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY- 226
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------- 302
+ P V +S N P P SG G AVPGL P+
Sbjct: 227 -LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGV 285
Query: 303 -PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSGGTGSGGQIEGPPGANLF 353
P+PG GH L + G V SP VA + +P+ S Q GP G NLF
Sbjct: 286 VPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGV------QQYTGPEGCNLF 336
Query: 354 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 413
IYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG
Sbjct: 337 IYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNG 396
Query: 414 CQLGGKKLKVQLKRDNKQNKPY 435
Q+G K+LKVQLKR PY
Sbjct: 397 FQIGMKRLKVQLKRPKDPGHPY 418
>gi|189241911|ref|XP_971057.2| PREDICTED: similar to bruno-3 CG12478-PA [Tribolium castaneum]
Length = 569
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 189/472 (40%), Positives = 246/472 (52%), Gaps = 61/472 (12%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ + + +KLFVGQ+P+H+ E L MF+EF + E ++KDK T +GC F+ S
Sbjct: 116 QANGNRDVIKLFVGQIPRHLEEDDLRPMFEEFGKIYEFTVLKDKYTGMHKGCAFLTYFSP 175
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSI 125
+ A A NA H K TLPG + P+QVK AD E + KLF+GML K +E +V LF+
Sbjct: 176 ESALNAQNALHEKHTLPGMNRPIQVKPADSENRGGKDRKLFVGMLSKQQTEEDVRQLFAP 235
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+GTI++ ILRG SKGCAF+KY + ++A AA+ +++G M G+S LVVK+ADTEK
Sbjct: 236 FGTIEECTILRGPDGASKGCAFVKYSSHQEAQAAINSLHGSQTMPGASSSLVVKFADTEK 295
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQA-------------- 231
ERQ RR Q A N+ + + FGA Y Y +
Sbjct: 296 ERQLRRM---QQMAGNMSLLNPFVFNQFGA--------YGAYAQHSLDFQQQAALMAAAT 344
Query: 232 -SGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP--RNYAMPPSGFV 288
G+Y L +G PVN GA P L S P A P+G
Sbjct: 345 AQGTYINPMAALATQIPHATLNGSGQPVN------GAIPSLPSPTMPTFNMAAQTPNGQP 398
Query: 289 GSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS--------PGSVSPAV---- 325
G G AV P YP L G L ++ PG PAV
Sbjct: 399 G-GTEAVYTNGIPQTYPAHALHLSIPAQGLPNGEAALQHAAYPGMQPYPGVAYPAVYGQF 457
Query: 326 --ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 383
A P ++ + G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+
Sbjct: 458 PQAIPQPMSAVAPAQREGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFI 517
Query: 384 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 518 DRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 569
>gi|348586640|ref|XP_003479076.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Cavia
porcellus]
gi|410968368|ref|XP_003990679.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Felis catus]
Length = 413
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/424 (39%), Positives = 230/424 (54%), Gaps = 16/424 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGH 311
Q A A+ +++ + P + A P+ V A G+Q Y YP
Sbjct: 237 ------MQHMAAINANGLIATPITPSS-AQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLV 289
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 371
P P ++ P Q EGP G N+FIYH+PQEF D E+ F
Sbjct: 290 APAFPQPPALVAQQPPPPPQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFV 349
Query: 372 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 350 PFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDA 409
Query: 432 NKPY 435
N+PY
Sbjct: 410 NRPY 413
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|147902406|ref|NP_001090639.1| CUGBP Elav-like family member 5 [Xenopus (Silurana) tropicalis]
gi|152013396|sp|A0JM51.1|CELF5_XENTR RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|117558445|gb|AAI25740.1| brunol5 protein [Xenopus (Silurana) tropicalis]
Length = 486
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 247/473 (52%), Gaps = 81/473 (17%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 45 DAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKA 104
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE EV+++F +G+I++
Sbjct: 105 QTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEEC 164
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA++A++G M G+S LVVK+ADT+KER RR
Sbjct: 165 SVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRM 224
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG------------------------ 228
Q+ Q PSL ALP+ PY+ Y
Sbjct: 225 QQMVGQLGIF------TPSL--ALPIS---PYSAYAQALMQQQTTVLSTSHGSYLSPSVA 273
Query: 229 -----YQASGSYGLMQYRLPPMQNQPGFH-----------GIIPPVNQGNAMRGASPDLS 272
Q G+ L P+ G H G++ P+ N G P S
Sbjct: 274 FPSCHIQQIGAVNLNGLPAAPITPASGLHSPPVIGTAAVPGLVAPLT--NGFPGLVPFPS 331
Query: 273 SNMGPRNY---------AMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSVS 322
S+ A P+ V S +P+ G+ QY YP L P+ +S
Sbjct: 332 SHPALDTIYTNSIVPYPAQSPALTVESLHPSFTGVQQYSAIYPTAAL--TPVTHSTPQPP 389
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + Q EGP G NLFIYH+PQEFGD EL F FG ++S+KVF
Sbjct: 390 PILQ----------------QREGPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR +PY
Sbjct: 434 MDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDTTQPY 486
>gi|350583383|ref|XP_003481500.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Sus scrofa]
gi|397492760|ref|XP_003817288.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Pan paniscus]
gi|426331465|ref|XP_004026701.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gorilla
gorilla gorilla]
Length = 414
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 229/425 (53%), Gaps = 17/425 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGH 311
Q A A+ +++ + P + A P+ V A G+Q Y YP
Sbjct: 237 ------MQHMAAINANGLIATPITPSS-AQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLV 289
Query: 312 RP-LNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 370
P P V+ Q EGP G N+FIYH+PQEF D E+ F
Sbjct: 290 APAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMF 349
Query: 371 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 430
FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 350 VPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 409
Query: 431 QNKPY 435
N+PY
Sbjct: 410 ANRPY 414
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|348526888|ref|XP_003450951.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2
[Oreochromis niloticus]
Length = 405
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 170/432 (39%), Positives = 243/432 (56%), Gaps = 40/432 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K S+ +V LF +G+I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ SQ +F + + + P YN Y + L+Q + + Q +
Sbjct: 185 QQVASQLG-----------IFSPMTLNF-PAYNAY------TQALVQQQ--ALVAQSAYL 224
Query: 253 GIIPPVN----QGNAMRGASPDLSSNMGPR--NYAMPPSGFVGSGYPAVPGLQ-YPMPYP 305
+ V Q A A+ +++ + P + A P+ + A G+Q Y YP
Sbjct: 225 SPVATVAAVQMQQMAALNANGIIATPITPITPSSAQSPAAALDPLQQAYAGMQHYTAAYP 284
Query: 306 G--GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGD 363
G++G +P P V+ EGP G N+FIYH+PQEF D
Sbjct: 285 AAYGLVG-QPFPQQPTLVAQQHQQPQQQQQR----------EGPEGCNIFIYHLPQEFSD 333
Query: 364 QELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV 423
E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKV
Sbjct: 334 SEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKV 393
Query: 424 QLKRDNKQNKPY 435
QLKR N+PY
Sbjct: 394 QLKRPKDANRPY 405
>gi|338725075|ref|XP_003365078.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Equus
caballus]
gi|426331469|ref|XP_004026703.1| PREDICTED: CUGBP Elav-like family member 3 isoform 4 [Gorilla
gorilla gorilla]
gi|355758212|gb|EHH61449.1| hypothetical protein EGM_19912 [Macaca fascicularis]
Length = 419
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 230/434 (52%), Gaps = 30/434 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP----PSGFVGSGYPAVPGLQYPMPYPG 306
N + +P ++ P A P P+ +GY VP P P
Sbjct: 237 MQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPD 296
Query: 307 GMLGHRPLNNSPGSVSPAVANS-----NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF 361
+ P V P A S +P + G GP G N+FIYH+PQEF
Sbjct: 297 ALY--------PNGVHPYPAQSPAAPVDPLQQAYAGM---QHYTGPDGCNIFIYHLPQEF 345
Query: 362 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 421
D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+L
Sbjct: 346 TDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRL 405
Query: 422 KVQLKRDNKQNKPY 435
KVQLKR N+PY
Sbjct: 406 KVQLKRPKDANRPY 419
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|431896648|gb|ELK06060.1| CUG-BP- and ETR-3-like factor 3 [Pteropus alecto]
Length = 419
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 231/434 (53%), Gaps = 30/434 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP----PSGFVGSGYPAVPGLQYPMPYPG 306
N + +P ++ P A P P+ +GY VP P P
Sbjct: 237 MQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPAGQPAPD 296
Query: 307 GMLGHRPLNNSPGSVSPAVANS-----NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF 361
+ P V P A S +P + G GP G N+FIYH+PQEF
Sbjct: 297 ALY--------PNGVHPYPAQSPAAPVDPLQQAYAGM---QHYTGPDGCNIFIYHLPQEF 345
Query: 362 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 421
D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+L
Sbjct: 346 TDSEVLQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRL 405
Query: 422 KVQLKRDNKQNKPY 435
KVQLKR N+PY
Sbjct: 406 KVQLKRPKDANRPY 419
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARES 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|410033642|ref|XP_524868.3| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Pan
troglodytes]
Length = 414
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 229/425 (53%), Gaps = 17/425 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALEAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGH 311
Q A A+ +++ + P + A P+ V A G+Q Y YP
Sbjct: 237 ------MQHMAAINANGLIATPITPSS-AQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLV 289
Query: 312 RP-LNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 370
P P V+ Q EGP G N+FIYH+PQEF D E+ F
Sbjct: 290 APAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMF 349
Query: 371 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 430
FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 350 VPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 409
Query: 431 QNKPY 435
N+PY
Sbjct: 410 ANRPY 414
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|432908655|ref|XP_004077968.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 457
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 182/474 (38%), Positives = 252/474 (53%), Gaps = 72/474 (15%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V LF +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQTDEDVRRLFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR--------LPP 244
Q+ SQ +F + + + P YN Y + L+Q++ L P
Sbjct: 185 QQVASQLG-----------IFSPMTLNF-PAYNAYTQAVNAQ--LVQHQALVAQSAYLSP 230
Query: 245 --------MQNQPGF--HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP----PSGFVGS 290
MQ +GII + +P +N P A P P +
Sbjct: 231 VATVAAVQMQQMAALNANGII-----ATPITPITPSSGTNTPPAIAATPVPALPPPIGMN 285
Query: 291 GYPAVP----GLQYPMPYPGGMLGHRPLNNSPGSVSP---AVANSNPSTSS-SGGTGSGG 342
GY +VP G Q Y G+ H+ SP ++ P A A T++ G G
Sbjct: 286 GYSSVPAPTNGQQTETLYTNGV--HQYQAQSPAALDPLQQAYAGMQHYTAAYPAAYGLVG 343
Query: 343 Q---------------------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 381
Q EGP G N+FIYH+PQEF D E+ F FG V+SAKV
Sbjct: 344 QPFPQQQTLVAQQHQQPQQQQQREGPEGCNIFIYHLPQEFSDSEMLQMFLPFGNVISAKV 403
Query: 382 FVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
FVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 404 FVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 457
>gi|359321741|ref|XP_003639690.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Canis
lupus familiaris]
Length = 412
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 231/424 (54%), Gaps = 17/424 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGH 311
Q A A+ +++ + P + A P+ V A G+Q Y YP
Sbjct: 237 ------MQHMAAINANGLIATPITPSS-AQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLV 289
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 371
P P ++ A P Q EGP G N+FIYH+PQEF D E+ F
Sbjct: 290 APAFPQPPALV-AQQPPPPPQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFV 348
Query: 372 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 349 PFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDA 408
Query: 432 NKPY 435
N+PY
Sbjct: 409 NRPY 412
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|395535953|ref|XP_003769985.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Sarcophilus
harrisii]
Length = 408
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 231/424 (54%), Gaps = 21/424 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLNPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGH 311
Q A A+ +++ + P + A P+ V A G+Q Y YP
Sbjct: 237 ------MQHMAAINANGLIATPITPSS-AQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLV 289
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 371
P P PA+ P + EGP G N+FIYH+PQEF D E+ F
Sbjct: 290 TPAFPQP----PALVTQQPPPPPQQQQQQQQR-EGPDGCNIFIYHLPQEFTDSEILQMFV 344
Query: 372 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 345 PFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDA 404
Query: 432 NKPY 435
N+PY
Sbjct: 405 NRPY 408
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|66269429|gb|AAY43159.1| napor protein short isoform [Danio rerio]
Length = 473
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/449 (39%), Positives = 248/449 (55%), Gaps = 47/449 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 226 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL----------- 272
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS-----GYPAVPGLQYPMP 303
G + Q A G++ + S+ MG G G+ A+ G M
Sbjct: 273 ----GAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLAGATVGLNNINALAGSVNSMA 326
Query: 304 YPGGMLGHRPLNNSPGSVSPA-------------VANSNPSTSSSG----GTGSGGQIEG 346
G LG L+N GS P A + P+ S + +G Q EG
Sbjct: 327 ALNGGLGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEG 384
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 385 PEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQA 444
Query: 407 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 445 AIQAMNGFQIGMKRLKVQLKRSKNDSKPY 473
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 224
>gi|50508361|dbj|BAD30314.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|50510235|dbj|BAD31433.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|215687308|dbj|BAG91895.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 414
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/416 (43%), Positives = 226/416 (54%), Gaps = 77/416 (18%)
Query: 89 LQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK--G 144
+QVKYADGELERL E KLFIGMLP++V E EVSALFS YG I+ L++LR Q+T K
Sbjct: 1 MQVKYADGELERLAAEQKLFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKAAA 60
Query: 145 CAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 203
CA L++ +KE A AA+EA+NG + GSS LVVK ADTE+E+QAR+AQKAQ+Q + P
Sbjct: 61 CAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREKQARKAQKAQAQPSK-P 119
Query: 204 NADSQHPSLF---GALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQN------------- 247
P L GA M + PPYN Y+ G+ L M N
Sbjct: 120 LRFYLFPQLLSISGAPQMSFLPPYNVLDYKTEGTTDPELKDLMKMTNDKLEMLVTELKSV 179
Query: 248 --------------QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP--PSGFVGSG 291
QP H ++P + + D + P +Y P +
Sbjct: 180 VNLLENRVTYNDPIQPIQHSLLPVEHDEKQYKPNECDSKTLEVPGHYGHTKNPLALYSTM 239
Query: 292 YPAV--------------PG--------------LQYPMP----------YPGGMLGHRP 313
YP V PG +Q P P Y G ++G P
Sbjct: 240 YPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGYIQPPYPDLSGLHYPVSYAGALVGDTP 299
Query: 314 LNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAF 373
S G V+ ++SN SS+ T G +IEGPP ANLF+Y IPQE+GD++L N FQ F
Sbjct: 300 QYFSDGKVNIPNSHSN-HASSAANTKIGSKIEGPPRANLFVYDIPQEYGDEDLANLFQEF 358
Query: 374 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
GR+LS KVF+D+ATGVSKCFGFVSY++PASAQ AI MNG Q+GGK LKVQLKR+
Sbjct: 359 GRILSTKVFIDRATGVSKCFGFVSYDTPASAQAAIRRMNGSQIGGKMLKVQLKRET 414
>gi|60729622|pir||JC7967 Napor protein - zebra fish
gi|14030309|gb|AAK52851.1|AF321194_1 Napor [Danio rerio]
Length = 441
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/449 (39%), Positives = 248/449 (55%), Gaps = 47/449 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 194 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL----------- 240
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS-----GYPAVPGLQYPMP 303
G + Q A G++ + S+ MG G G+ A+ G M
Sbjct: 241 ----GAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLAGATVGLNNINALAGSVNSMA 294
Query: 304 YPGGMLGHRPLNNSPGSVSPA-------------VANSNPSTSSSG----GTGSGGQIEG 346
G LG L+N GS P A + P+ S + +G Q EG
Sbjct: 295 ALNGGLGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEG 352
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 353 PEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQA 412
Query: 407 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 413 AIQAMNGFQIGMKRLKVQLKRSKNDSKPY 441
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 192
>gi|334324674|ref|XP_003340553.1| PREDICTED: CUGBP, Elav-like family member 3 [Monodelphis domestica]
Length = 408
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 231/424 (54%), Gaps = 21/424 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLNPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGH 311
Q A A+ +++ + P + A P+ V A G+Q Y YP
Sbjct: 237 ------MQHMAAINANGLIATPITPSS-AQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLV 289
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 371
P P PA+ P + EGP G N+FIYH+PQEF D E+ F
Sbjct: 290 TPAFPQP----PALVAQQPPPPPQQQQQQQQR-EGPDGCNIFIYHLPQEFTDSEILQMFV 344
Query: 372 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 345 PFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDA 404
Query: 432 NKPY 435
N+PY
Sbjct: 405 NRPY 408
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|66269433|gb|AAY43161.1| napor protein isoform [Danio rerio]
Length = 483
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 176/446 (39%), Positives = 248/446 (55%), Gaps = 45/446 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 60 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 119
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 120 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 179
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 180 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 239
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 240 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL----------- 286
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS--GYPAVPGLQYPMPYPG 306
G + Q A G++ + S+ MG G G+ G + L G
Sbjct: 287 ----GAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLAGATVGLNNINALAGMAALNG 340
Query: 307 GMLGHRPLNNSPGSVSPA-------------VANSNPSTSSSG----GTGSGGQIEGPPG 349
G LG L+N GS P A + P+ S + +G Q EGP G
Sbjct: 341 G-LGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEG 397
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 409
ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI
Sbjct: 398 ANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ 457
Query: 410 MMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR +KPY
Sbjct: 458 AMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 140 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 198
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 199 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 238
>gi|444515071|gb|ELV10733.1| CUGBP Elav-like family member 3 [Tupaia chinensis]
Length = 431
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 231/443 (52%), Gaps = 36/443 (8%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP----PSGFVGSGYPAVPGLQYPMPYPG 306
N + +P ++ P A P P+ +GY VP P P
Sbjct: 237 MQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPD 296
Query: 307 GMLGHRPLNNSPGSVSPAVANS-----NPSTSSSGGTGSGGQIE---------GPPGANL 352
+ P V P A S +P + G E GP G N+
Sbjct: 297 ALY--------PNGVHPYPAQSPAAPVDPLQQAYAGMQHYTVTERFLCLCFHPGPDGCNI 348
Query: 353 FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 412
FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MN
Sbjct: 349 FIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMN 408
Query: 413 GCQLGGKKLKVQLKRDNKQNKPY 435
G Q+G K+LKVQLKR N+PY
Sbjct: 409 GFQIGMKRLKVQLKRPKDANRPY 431
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|289547605|ref|NP_001166120.1| CUGBP Elav-like family member 3 isoform 3 [Homo sapiens]
gi|338725073|ref|XP_003365077.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Equus
caballus]
gi|119573807|gb|EAW53422.1| trinucleotide repeat containing 4, isoform CRA_d [Homo sapiens]
Length = 415
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 230/426 (53%), Gaps = 18/426 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGH 311
Q A A+ +++ + P + A P+ V A G+Q Y YP
Sbjct: 237 ------MQHMAAINANGLIATPITPSS-AQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLV 289
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQI--EGPPGANLFIYHIPQEFGDQELGNA 369
P P ++ P Q EGP G N+FIYH+PQEF D E+
Sbjct: 290 APAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQM 349
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 350 FVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK 409
Query: 430 KQNKPY 435
N+PY
Sbjct: 410 DANRPY 415
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|363742941|ref|XP_428898.3| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Gallus
gallus]
Length = 401
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 175/431 (40%), Positives = 239/431 (55%), Gaps = 42/431 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ SQ Q FGA Y+ Y + LMQ + + +
Sbjct: 185 QQVASQLGMFSPIALQ----FGA--------YSAY------TQALMQQQAALVAAHSAYL 226
Query: 253 GIIPPVN-QGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP------GLQ-YPMPY 304
+ + Q M +P+ G +PPS PA P G+Q Y Y
Sbjct: 227 SPMATMAVQMQHMGTVNPN-----GLIATPLPPSSAQSPAAPADPLQQAYAGMQHYTAAY 281
Query: 305 PGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQ 364
P G VSPA A P + + EGP G N+FIYH+PQEF D
Sbjct: 282 PAAY----------GLVSPAFAPPGPLLAPPPPPQQQQR-EGPEGCNIFIYHLPQEFADT 330
Query: 365 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 424
E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQ
Sbjct: 331 EILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIHAMNGFQIGMKRLKVQ 390
Query: 425 LKRDNKQNKPY 435
LKR N+PY
Sbjct: 391 LKRPKDANRPY 401
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K + + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+ A H +TLPGASS L VK+AD E ER
Sbjct: 144 SHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|167521936|ref|XP_001745306.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776264|gb|EDQ89884.1| predicted protein [Monosiga brevicollis MX1]
Length = 389
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 226/420 (53%), Gaps = 56/420 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P++ +E L +F EF + EV I++D+ T S+GC F+ +RQ A A
Sbjct: 15 DAMKLFIGQIPRNYSEEDLTHIFSEFGHIYEVMILRDRQTHNSKGCAFLTFTTRQAAVDA 74
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ H K TLP S P+QVK AD + E KLF+GML + ++E ++ A F +G ++DL
Sbjct: 75 IERHHEKTTLPNMSHPMQVKIADTDQRNAERKLFVGMLARTMNEDDLRAKFGAFGHVEDL 134
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR + +SKGCAF+K+ ++A +A+ ++ M+G P+VVK AD EK++Q R+
Sbjct: 135 TILRHADGSSKGCAFVKFSNADEAQSAIANLHHSETMDGCRSPIVVKVADNEKQKQHRKL 194
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ Q NN M PYN S SY M NQ
Sbjct: 195 QR---QLNN----------------MNVMMPYNMIPNPRSMSYN--------MYNQAANF 227
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHR 312
G GN M +PD + MG + P G YP+ P P+ G +
Sbjct: 228 GQF-----GNGM--PAPDHGA-MGEVDGGASPVGGFNMPYPSNPYGMASAPF-----GQQ 274
Query: 313 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQA 372
P P + P SS Q EGP G+NLFIYH+PQEF DQ L F
Sbjct: 275 PYMGQPMA---------PRQSSQ-------QPEGPDGSNLFIYHLPQEFNDQALAATFLP 318
Query: 373 FGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 432
FG V+SAKVFVDK TG SKCFGFVSY++PASA+ AI MNG Q+G K+LKVQLKR N
Sbjct: 319 FGNVISAKVFVDKMTGQSKCFGFVSYDNPASAEAAITAMNGFQIGMKRLKVQLKRPKSAN 378
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LFI IP+ + +++L + F FG + + D+ T SK F+++ + +A +
Sbjct: 14 PDAMKLFIGQIPRNYSEEDLTHIFSEFGHIYEVMILRDRQTHNSKGCAFLTFTTRQAAVD 73
Query: 407 AI 408
AI
Sbjct: 74 AI 75
>gi|344275414|ref|XP_003409507.1| PREDICTED: CUGBP Elav-like family member 3 [Loxodonta africana]
Length = 420
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 230/435 (52%), Gaps = 31/435 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF- 251
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 252 ---------HGII-PPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP 301
+G+I P+ +A A+P + P A + YPA L P
Sbjct: 237 MQHMAAINANGLIATPITPSSAQSPAAP-----VDPLQQAYAGMQHYTAAYPAAYSLVAP 291
Query: 302 -MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQE 360
P P ++ + P Q EGP G N+FIYH+PQE
Sbjct: 292 AFPQPPALV------AQQPAPPPQQQQQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQE 345
Query: 361 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 420
F D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+
Sbjct: 346 FTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKR 405
Query: 421 LKVQLKRDNKQNKPY 435
LKVQLKR N+PY
Sbjct: 406 LKVQLKRPKDANRPY 420
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|606976|gb|AAA81375.1| ribonucleoprotein [Xenopus laevis]
Length = 462
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/479 (37%), Positives = 249/479 (51%), Gaps = 77/479 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR----------L 242
Q+ AN L +F + + + Y+ Y S LMQ + L
Sbjct: 185 QQV---ANQL--------GMFSPIALQFG-AYSAYTQAVSDQ--LMQQQAALVAAHSAYL 230
Query: 243 PPMQNQPGF----------HGII-PPVNQGNAMRGAS-----PDLSSNMGPRNYAMPPSG 286
PM +GII P+ Q N + +S P L++ + P+
Sbjct: 231 NPMATMAAVQMQQMATINPNGIIATPITQINPITSSSGTSTPPTLTAT----QVSAIPAT 286
Query: 287 FVGSGYPAVP---------------GLQ-YPMPYPGGMLGHRPLNN-------------- 316
+GY AVP GL YP P L PL
Sbjct: 287 LGVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPVAQLD--PLQQAYAGMQHYTAAYPA 344
Query: 317 SPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 376
+ G VSPA + EGP G N+FIYH+PQEF D E+ F FG V
Sbjct: 345 AYGLVSPAFTQPPAIIQQQPPQQQQQR-EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNV 403
Query: 377 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 404 ISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|147907254|ref|NP_001079936.1| CUGBP Elav-like family member 3-A [Xenopus laevis]
gi|152013388|sp|Q91579.2|CEL3A_XENLA RecName: Full=CUGBP Elav-like family member 3-A; Short=CELF-3A;
AltName: Full=Bruno-like protein 1-A; AltName:
Full=CUG-BP- and ETR-3-like factor 3-A; AltName:
Full=ELAV-type RNA-binding protein 1-A; Short=ETR-1-A;
AltName: Full=RNA-binding protein BRUNOL-1-A; AltName:
Full=Trinucleotide repeat-containing gene 4 protein A
gi|34785486|gb|AAH57704.1| Etr-1 protein [Xenopus laevis]
gi|47937574|gb|AAH72134.1| Etr-1 protein [Xenopus laevis]
Length = 462
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/479 (37%), Positives = 249/479 (51%), Gaps = 77/479 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR----------L 242
Q+ AN L +F + + + Y+ Y S LMQ + L
Sbjct: 185 QQV---ANQL--------GMFSPIALQFG-AYSAYTQAVSDQ--LMQQQAALVAAHSAYL 230
Query: 243 PPMQNQPGF----------HGII-PPVNQGNAMRGAS-----PDLSSNMGPRNYAMPPSG 286
PM +GII P+ Q N + +S P L++ + P+
Sbjct: 231 NPMATMAAVQMQQMATINPNGIIATPITQINPITSSSGTSTPPTLTAT----QVSAIPAT 286
Query: 287 FVGSGYPAVP---------------GLQ-YPMPYPGGMLGHRPLNN-------------- 316
+GY AVP GL YP P L PL
Sbjct: 287 LGVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPVAQLD--PLQQAYAGMQHYTAAYPA 344
Query: 317 SPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 376
+ G VSPA + EGP G N+FIYH+PQEF D E+ F FG V
Sbjct: 345 AYGLVSPAFTQPPAILQQQPPQQQQQR-EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNV 403
Query: 377 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 404 ISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|158253638|gb|AAI54064.1| tnrc4 protein [Xenopus (Silurana) tropicalis]
Length = 462
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 183/478 (38%), Positives = 249/478 (52%), Gaps = 75/478 (15%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR----------L 242
Q+ +Q Q FGA Y+ Y S LMQ + L
Sbjct: 185 QQVANQLGMFSPIALQ----FGA--------YSAYTQAVSDQ--LMQQQAALVAAHSAYL 230
Query: 243 PPMQNQPGF----------HGII-PPVNQGNAMRGASPDLSSNMGPRNYAMP----PSGF 287
PM +GII P+ N + +S ++ P A P P+
Sbjct: 231 NPMATMAAVQMQQMATINPNGIIATPITPINPITSSS---GTSTPPTLAATPVSAIPATL 287
Query: 288 VGSGYPAVP---------------GLQ-YPMPYPGGMLGHRPLNN--------------S 317
+GY AVP GL YP P L PL +
Sbjct: 288 GVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPVAQLD--PLQQAYAGMQHYTAAYPAA 345
Query: 318 PGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 377
G VSPA + P+ Q EGP G N+FIYH+PQEF D E+ F FG V+
Sbjct: 346 YGLVSPAFTQA-PAILPQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVI 404
Query: 378 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 405 SAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|432852724|ref|XP_004067353.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 3
[Oryzias latipes]
Length = 454
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 238/443 (53%), Gaps = 44/443 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R + Q ++P +G + S+ +MQ + M G
Sbjct: 218 RMHQMAGQLGI------------------FSPMTIQFGAYGTYSHAMMQQQAALMAATQG 259
Query: 251 FHGIIPPVNQGNAMRGASPDLSSN------MGPRNYAMPPSGFVGSGYPAVPGLQYPMPY 304
+ + P A + N M P + P G + AVP + P+
Sbjct: 260 SY-LNPMAAIAAAQMQQMAAFNVNGLVATPMTPSSGTSTPPGISAT---AVPSIATPI-- 313
Query: 305 PGGMLGHRPL----NNSPGS-------VSPAVANSNPSTSSSGGTGSGGQ-IEGPPGANL 352
G+ G L N P S + P A S T +G Q GP G NL
Sbjct: 314 --GVNGFSALPPQTNGQPTSEPIYTNGIHPYPAQSPTVTDPLQQAYAGVQHYAGPEGCNL 371
Query: 353 FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 412
FIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ AI MN
Sbjct: 372 FIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQAAIQAMN 431
Query: 413 GCQLGGKKLKVQLKRDNKQNKPY 435
G Q+G K+LKVQLKR N+PY
Sbjct: 432 GFQIGMKRLKVQLKRPKDANRPY 454
>gi|344246977|gb|EGW03081.1| CUG-BP- and ETR-3-like factor 3 [Cricetulus griseus]
Length = 447
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/451 (38%), Positives = 234/451 (51%), Gaps = 36/451 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP----PSGFVGSGYPAV---------PG 297
N + +P ++ P A P P+ +GY V P
Sbjct: 237 MQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPD 296
Query: 298 LQYP---MPYPGGML------GHRPLNNSPGS----VSPAVANSNPSTSSSGGTGSGGQI 344
YP PYP L G P+ S +S A + + P
Sbjct: 297 ALYPNGVHPYPDEALSAERGAGGVPIVAQTRSWLVILSSAQSPAAPVDPLQQAYAGMQHY 356
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 357 TGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 416
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 417 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|13537210|dbj|BAB40781.1| HrETR-1 [Halocynthia roretzi]
Length = 594
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 258/510 (50%), Gaps = 87/510 (17%)
Query: 5 KKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP 64
K+ + ++ VKLF+GQVPK+ TE +L +F+ + + E++++ DK T +GC F+
Sbjct: 93 KEFQDKDDDAVKLFIGQVPKNWTEHELRPIFEPYGEIYELSVLHDKYTGMHKGCAFLTYC 152
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS 124
+ A A N H +KTLPG + P+QVK AD + + KLF+GML K +E ++ LF
Sbjct: 153 KKTPAINAQNFLHEQKTLPGMNHPMQVKPADTVNKGEDRKLFVGMLGKRQTEEDIRQLFE 212
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+G I++ ILR SKGC+F+K T A AA++A++G M G+S +VVK ADT+
Sbjct: 213 KFGHIEECTILRTPDGQSKGCSFVKLSTSTGARAAIDALHGSQTMPGASSSIVVKLADTD 272
Query: 185 KERQARRAQKAQSQ--------------ANNLPNADSQHPSLF---GALP--MGYAP--- 222
KER R+ Q+ + LP +QHP + G +P G++P
Sbjct: 273 KERAIRKMQQMAQNYGLVSPVTLQLGPYGSPLPQM-AQHPVMATTPGVMPAAAGWSPLAT 331
Query: 223 ----------------------PYNGYGYQASG----------SYGLMQYRLPPMQNQPG 250
NG+G Q +G S + PPM +Q G
Sbjct: 332 AFGTATQLGQMTNLGPASAIMQATNGHGAQIAGIPSTPQSPVASITTLNLVQPPMASQSG 391
Query: 251 FHGI--IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGY---------------P 293
I P+ R A+P +++ ++M PS V +G P
Sbjct: 392 MTTPQEIYPLQAYPGTRLAAPVVTT-----THSMTPSLAVHNGSSSDPSPMTLCASQTPP 446
Query: 294 AVPGLQ---YPMPY-----PGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIE 345
+ +Q YP PY P G P +P ++P + T Q E
Sbjct: 447 TMEMIQAPAYPQPYTVVYVPPGQYAPVPQQLTPTHLTPITTTQGAPALVNSPTAP--QKE 504
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP G NLFIYH+PQEF D +L N FQ FG V+SAKVF+D+AT SKCFGFVSY++P SAQ
Sbjct: 505 GPEGCNLFIYHLPQEFTDADLANVFQPFGNVISAKVFIDRATNQSKCFGFVSYDNPVSAQ 564
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +Q++PY
Sbjct: 565 TAIQTMNGFQIGMKRLKVQLKRPKEQSRPY 594
>gi|390468527|ref|XP_003733960.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Callithrix
jacchus]
Length = 454
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 173/437 (39%), Positives = 234/437 (53%), Gaps = 36/437 (8%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQDEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACSAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PTPIGING 317
Query: 311 HRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ--------IEGPPGANLFIYHIP 358
PL N PGS + +P + S G Q GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 359 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 418
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 419 KKLKVQLKRDNKQNKPY 435
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|66269431|gb|AAY43160.1| napor protein long isoform [Danio rerio]
Length = 493
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 176/454 (38%), Positives = 250/454 (55%), Gaps = 37/454 (8%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY---NGYGYQAS--GSYGLMQYRLP 243
RR Q+ +Q N+ S SL G G P Y G+ + A+ S L
Sbjct: 226 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLAVRGHTHAATPTSSTANAAAALL 283
Query: 244 PMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS-----GYPAVPGL 298
G + Q A G++ + S+ MG G G+ A+ G
Sbjct: 284 QQATSSSNLGAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLAGATVGLNNINALAGS 341
Query: 299 QYPMPYPGGMLGHRPLNNSPGSVSPA-------------VANSNPSTSSSG----GTGSG 341
M G LG L+N GS P A + P+ S + +G
Sbjct: 342 VNSMAALNGGLGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAG 399
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P
Sbjct: 400 SQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNP 459
Query: 402 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 VSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 493
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 224
>gi|24762232|ref|NP_068757.2| CUGBP Elav-like family member 5 isoform 1 [Homo sapiens]
gi|402903694|ref|XP_003914695.1| PREDICTED: CUGBP Elav-like family member 5 [Papio anubis]
gi|74762534|sp|Q8N6W0.1|CELF5_HUMAN RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|20380221|gb|AAH28101.1| Bruno-like 5, RNA binding protein (Drosophila) [Homo sapiens]
gi|119589733|gb|EAW69327.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|119589734|gb|EAW69328.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|123981490|gb|ABM82574.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
gi|123996323|gb|ABM85763.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
Length = 485
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/465 (39%), Positives = 246/465 (52%), Gaps = 64/465 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY 265
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------ 302
+ P V +S N P P SG G AVPGL P+
Sbjct: 266 --LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAG 323
Query: 303 --PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS----------SSGGTGSGG 342
P+PG GH L + G V SP VA + +P+ S ++ T
Sbjct: 324 VVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAH 380
Query: 343 QI------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+ EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT S
Sbjct: 381 SVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQS 440
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 441 KCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 485
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 334 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 391 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>gi|393906351|gb|EJD74254.1| HrETR-1 protein [Loa loa]
Length = 507
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 176/481 (36%), Positives = 243/481 (50%), Gaps = 73/481 (15%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 42 DTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRC 101
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V ALF+ +
Sbjct: 102 QAALHDQKTLPGMNRAMQVKPADNESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPF 161
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ T QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 162 GVIDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKE 221
Query: 187 RQARRAQKAQSQANNLPNADSQHPSLFGA----------------------LPMGYAPPY 224
RQ RR Q+ +Q L ++ P+ AP
Sbjct: 222 RQLRRMQQMAAQMGLLNPVLVNQAGVYNTAYQQLLQQQATLVAAQTAAAAYFPVAMAPQT 281
Query: 225 NGYGYQASGSYG----LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
+G+ L Q+ L P+ P+ Q ++++ S LS P +Y
Sbjct: 282 ALTAAGLAGTTNPATFLTQHPLQPISAL--------PLQQAHSVQAISA-LSQPYAPVDY 332
Query: 281 AMPPSGFVGSGYP-------AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVAN------ 327
A + V P AV Y +P G + P P P+V N
Sbjct: 333 AATAAASVTQYAPSSTAAAVAVDSTAYTLPASGTL----PAGTIPAVTLPSVYNPLVNLE 388
Query: 328 --SNPSTSSSGGT-----------GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFG 374
+NP + G+ ++ GP G NLFIYH+PQEFGD EL F FG
Sbjct: 389 QQANPYNQALQQAIALQQAAILFPGAQKEVLGPEGCNLFIYHLPQEFGDTELMQMFMPFG 448
Query: 375 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
V+SAKVF+D+AT SKCFGFVSY++ ASA AI MNG Q+G K+LKVQLKR ++KP
Sbjct: 449 HVISAKVFIDRATNQSKCFGFVSYDNTASAMAAIQAMNGFQIGMKRLKVQLKR--PRDKP 506
Query: 435 Y 435
Y
Sbjct: 507 Y 507
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
ES+ + + E KLFVG + K E + A+F F ++DEV +++ S+GC FV
Sbjct: 126 ESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPFGVIDEVTVLRG-ADGLSKGCAFVK 184
Query: 63 CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ +A A+NA H +T+PGASS L VK+AD E ER
Sbjct: 185 FATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 222
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 327 NSNPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 385
N + S S T S G ++ LF+ IP+ +++L + F+ FG++ + DK
Sbjct: 20 NGDSRMSRSSSTDSNGFPVKDADTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDK 79
Query: 386 ATGVSKCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 434
TG+ K F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 80 YTGLHKGCAFLTYCHRDSAVRCQAALHDQKTLPGMNRAMQVKPADNESRP 129
>gi|402874765|ref|XP_003901198.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Papio anubis]
Length = 454
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 173/437 (39%), Positives = 234/437 (53%), Gaps = 36/437 (8%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ--------IEGPPGANLFIYHIP 358
PL N PGS + +P + S G Q GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 359 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 418
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 419 KKLKVQLKRDNKQNKPY 435
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|332236064|ref|XP_003267225.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Nomascus
leucogenys]
Length = 454
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 173/437 (39%), Positives = 234/437 (53%), Gaps = 36/437 (8%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGHLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG A+PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGALPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ--------IEGPPGANLFIYHIP 358
PL N PGS + +P + S G Q GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 359 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 418
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 419 KKLKVQLKRDNKQNKPY 435
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|196012894|ref|XP_002116309.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
gi|190581264|gb|EDV21342.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
Length = 456
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 237/448 (52%), Gaps = 64/448 (14%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLFVGQ+P+ TE L ++F +F + E+ +IKD+TT+ +GC FV + A+
Sbjct: 32 KDAIKLFVGQLPRDCTEEDLHSLFDQFGPIYELAVIKDRTTKQHKGCAFVTYCKKSSAEA 91
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A +A H KK L G P+QVK AD E R E KLF+GML K E E+ ++FS YG+I++
Sbjct: 92 AQSAFHEKKVLSGMPRPMQVKPADCE-NREERKLFVGMLGKLDDENELKSMFSPYGSIEE 150
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ILR +SKGC F+K+ TK +A A++ ++G M G+S LVVK+ADTEK++ R+
Sbjct: 151 VTILRAIDGSSKGCGFVKFSTKSEAQVAIQNLHGSRNMPGASHQLVVKFADTEKDKYIRK 210
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPP------- 244
QK NA + H FG YAP YN YG SYG Q+ L P
Sbjct: 211 MQK---------NASNNHIVNFGRQYASYAPQYNNYG-----SYG--QFALQPAMQQQNN 254
Query: 245 -----------MQNQPGFHGIIPPVNQGNAMRGASPDLS------SNMGPRNYAMPPSGF 287
M H + + N+ + P S + N +G
Sbjct: 255 SNQNYGVHVGLMGQYTANHRLNAGSHSHNSTSMSHPQTSVTFPATTTQNNSNVVTGSAGA 314
Query: 288 VGSGYPA--------VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 339
VG G+P V +Q P + + P N++ SVS + +
Sbjct: 315 VGYGFPGYQININGLVDQIQSPYSVKYLIAQYAPFNHNAASVSASTVSPK---------- 364
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
EGP G NLFIYH+P EF D +L N F +G V+SAKV+++K T SKCFGFVSY+
Sbjct: 365 -----EGPAGCNLFIYHLPPEFTDYDLHNIFAPYGNVVSAKVYINKITKQSKCFGFVSYD 419
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKR 427
+ +SA +AI+ +NG + GKKLKV+ K+
Sbjct: 420 NASSAHHAISTLNGMMVYGKKLKVEYKK 447
>gi|395831373|ref|XP_003788777.1| PREDICTED: CUGBP Elav-like family member 5 [Otolemur garnettii]
Length = 485
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 182/465 (39%), Positives = 246/465 (52%), Gaps = 64/465 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY 265
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------ 302
+ P V +S N P P SG G AVPGL P+
Sbjct: 266 --LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTAAVPGLVAPITNGFAG 323
Query: 303 --PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS----------SSGGTGSGG 342
P+PG GH L + G V SP VA + +P+ S ++ T
Sbjct: 324 VVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAH 380
Query: 343 QI------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+ EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT S
Sbjct: 381 SVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQS 440
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 441 KCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 485
>gi|359322160|ref|XP_854891.3| PREDICTED: CUGBP, Elav-like family member 5 [Canis lupus
familiaris]
Length = 485
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 182/465 (39%), Positives = 246/465 (52%), Gaps = 64/465 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY 265
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------ 302
+ P V +S N P P SG G AVPGL P+
Sbjct: 266 --LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAG 323
Query: 303 --PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS----------SSGGTGSGG 342
P+PG GH L + G V SP VA + +P+ S ++ T
Sbjct: 324 VVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAH 380
Query: 343 QI------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+ EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT S
Sbjct: 381 SVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQS 440
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 441 KCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 485
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 334 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 391 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>gi|12746396|gb|AAK07476.1|AF329266_1 CUG-BP and ETR-3 like factor 5 [Homo sapiens]
Length = 481
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 181/457 (39%), Positives = 244/457 (53%), Gaps = 64/457 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY 265
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------ 302
+ P V +S N P P SG G AVPGL P+
Sbjct: 266 --LSPGVAFSPCHIQQIGAVSLNGLPATPVAPASGLHSPPLLGTTAVPGLVAPITNGFAG 323
Query: 303 --PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS----------SSGGTGSGG 342
P+PG GH L + G V SP VA + +P+ S ++ T
Sbjct: 324 VVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAH 380
Query: 343 QI------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+ EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT S
Sbjct: 381 SVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQS 440
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
KCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 441 KCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 477
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 334 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 391 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>gi|426379619|ref|XP_004056489.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Gorilla
gorilla gorilla]
Length = 454
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/437 (39%), Positives = 233/437 (53%), Gaps = 36/437 (8%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGHLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ--------IEGPPGANLFIYHIP 358
PL N PGS + +P + S G Q GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 359 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 418
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 419 KKLKVQLKRDNKQNKPY 435
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|397495532|ref|XP_003818606.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Pan paniscus]
Length = 454
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/437 (39%), Positives = 233/437 (53%), Gaps = 36/437 (8%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGHLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ--------IEGPPGANLFIYHIP 358
PL N PGS + +P + S G Q GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYTGMHHYAGPEGCNLFIYHLP 377
Query: 359 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 418
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 419 KKLKVQLKRDNKQNKPY 435
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|281337967|gb|EFB13551.1| hypothetical protein PANDA_012783 [Ailuropoda melanoleuca]
Length = 462
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 183/462 (39%), Positives = 245/462 (53%), Gaps = 61/462 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 23 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 82
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 83 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 142
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 143 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 202
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 203 MQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY 245
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------ 302
+ P V +S N P P SG G AVPGL P+
Sbjct: 246 --LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAG 303
Query: 303 --PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSS---GGTGS--------- 340
P+PGG H L + G V SP VA + +P+ S GTG+
Sbjct: 304 VVPFPGG---HPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTGTGAVRPSLGRGP 360
Query: 341 -------GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 393
G P G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCF
Sbjct: 361 APRPRLPGVATPRPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCF 420
Query: 394 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
GFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 421 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 462
>gi|148694026|gb|EDL25973.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 459
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 234/438 (53%), Gaps = 33/438 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPM-------- 302
+ Q + S + + P G+G A+PGL PM
Sbjct: 266 LGQVAAVAAQMQHVAAFSLVAAPLLPAAANTSP----GGNGPGALPGLPAPMGVNGFGSL 321
Query: 303 -PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGG----QIEGPPGANLFIYHI 357
P G G L N+ S PA ++ S++ Q EGP G NLFIYH+
Sbjct: 322 TPQSNGQPGSDTLYNNGVSPYPAYPSAYAPASTAFSQQPSALPQQQREGPEGCNLFIYHL 381
Query: 358 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 417
PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 382 PQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIG 441
Query: 418 GKKLKVQLKRDNKQNKPY 435
K+LKVQLKR N+PY
Sbjct: 442 MKRLKVQLKRPKDANRPY 459
>gi|289547741|ref|NP_001166155.1| CUGBP Elav-like family member 6 isoform 2 [Homo sapiens]
gi|194381648|dbj|BAG58778.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 172/437 (39%), Positives = 232/437 (53%), Gaps = 36/437 (8%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGHLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ--------IEGPPGANLFIYHIP 358
PL N PGS + +P + S G Q GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 359 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 418
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 419 KKLKVQLKRDNKQNKPY 435
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|170584368|ref|XP_001896973.1| RNA binding protein [Brugia malayi]
gi|158595662|gb|EDP34201.1| RNA binding protein, putative [Brugia malayi]
Length = 489
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 176/480 (36%), Positives = 245/480 (51%), Gaps = 71/480 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 24 DTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRC 83
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V +LF+ +
Sbjct: 84 QAALHDQKTLPGMNRAMQVKPADNESRPESPKNAEERKLFVGMLSKQHNEDDVRSLFAPF 143
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ T QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 144 GVIDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKE 203
Query: 187 RQARRAQKAQSQANNLPNADSQHPSLFGA----------------------LPMGYAPPY 224
RQ RR Q+ +Q L ++ P+ AP
Sbjct: 204 RQLRRMQQMAAQMGLLNPVLVNQAGVYNTAYQQLLQQQATLVAAQTAAAAYFPVAMAPQT 263
Query: 225 NGYGYQASGSYG----LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
+G+ L Q+ L P+ P+ Q N+++ S LS P +Y
Sbjct: 264 ALTAAGLAGTTNPATFLTQHPLQPLSAL--------PLQQANSVQAISA-LSQPYAPVDY 314
Query: 281 AMPPSGFVGSGYP-------AVPGLQYPMP----YPGGMLGHRPLNNSPGSVSPAVA--- 326
A + V P AV Y +P P G + L P + +P V+
Sbjct: 315 AAAAAASVTQYAPSSTAAAVAVDSTAYTLPASGTLPAGTISTVTL---PSAYNPLVSLEQ 371
Query: 327 NSNPSTSSSGGT-----------GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGR 375
+NP + G+ ++ GP G NLFIYH+PQEFGD EL F FG
Sbjct: 372 QANPYNQALQQAIALQQAAILFPGAQKEVLGPEGCNLFIYHLPQEFGDAELMQMFMPFGH 431
Query: 376 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
V+SAKVF+D+AT SKCFGFVSY++ ASA AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 432 VISAKVFIDRATNQSKCFGFVSYDNTASAMAAIQAMNGFQIGMKRLKVQLKR--PRDKPY 489
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
ES+ E + E KLFVG + K E + ++F F ++DEV +++ S+GC FV
Sbjct: 108 ESRPESPKNAEERKLFVGMLSKQHNEDDVRSLFAPFGVIDEVTVLRG-ADGLSKGCAFVK 166
Query: 63 CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ +A A+NA H +T+PGASS L VK+AD E ER
Sbjct: 167 FATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 204
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 327 NSNPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 385
N + S S T S G ++ LF+ IP+ +++L + F+ FG++ + DK
Sbjct: 2 NGDSMMSRSSSTDSNGFPVKDADTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDK 61
Query: 386 ATGVSKCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 434
TG+ K F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 62 YTGLHKGCAFLTYCHRDSAVRCQAALHDQKTLPGMNRAMQVKPADNESRP 111
>gi|354473520|ref|XP_003498983.1| PREDICTED: CUGBP Elav-like family member 6-like [Cricetulus
griseus]
Length = 551
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 239/456 (52%), Gaps = 47/456 (10%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 112 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 171
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 172 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 231
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 232 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMSGASSSLVVKLADTDRERALR 291
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN---------GYGYQASGSYGLMQYR 241
R Q+ Q HP+ LP+G Y G +
Sbjct: 292 RMQQMAGQLGAF------HPT---PLPLGACGAYTTAILQHQAALLAAAQGPGLGQVAAV 342
Query: 242 LPPMQNQPGFHGIIPPV-------NQGNAMRGASPDLSSNMG--------PRNYAMPPSG 286
MQ+ F + P+ + G + GA P L + MG P+ P S
Sbjct: 343 AAQMQHVAAFSLVAAPLLPTAANTSPGGSGPGALPGLPAPMGVNGFGSLTPQTNGQPGSD 402
Query: 287 FVG----SGYPA-VPGLQYPM--PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 339
+ S YPA PG+ P+ Y G ++ VS A + +
Sbjct: 403 TLYNNGLSPYPAQSPGVADPLQQAYAGIQHYAAAYPSAYAPVSTAFSQQPSALPQQ---- 458
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS++
Sbjct: 459 ---QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFD 515
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 516 NPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 551
>gi|157818811|ref|NP_001100297.1| CUGBP Elav-like family member 6 [Rattus norvegicus]
gi|149041860|gb|EDL95701.1| bruno-like 6, RNA binding protein (Drosophila) (predicted) [Rattus
norvegicus]
Length = 459
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 234/438 (53%), Gaps = 33/438 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPM-------- 302
+ Q + S + + P G+G A+PGL PM
Sbjct: 266 LGQVAAVAAQMQHVAAFSLVAAPLLPAAANTSP----SGNGPGALPGLPAPMGVNGFGSL 321
Query: 303 -PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGG----QIEGPPGANLFIYHI 357
P G G L N+ S PA ++ S++ Q EGP G NLFIYH+
Sbjct: 322 NPQTNGQPGSDSLYNNGLSPYPAYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHL 381
Query: 358 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 417
PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 382 PQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIG 441
Query: 418 GKKLKVQLKRDNKQNKPY 435
K+LKVQLKR N+PY
Sbjct: 442 MKRLKVQLKRPKDANRPY 459
>gi|327272096|ref|XP_003220822.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Anolis
carolinensis]
Length = 487
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 246/458 (53%), Gaps = 61/458 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPM--GYAPPYNGYGYQASGSYGLMQYR----- 241
RR Q+ +Q N + +G L G P Y QA+ S L +
Sbjct: 236 QRRLQQQLAQQMQQLNTAT-----WGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQM 290
Query: 242 -----------------LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPP 284
L + G G +N NA+ G + L+ +G
Sbjct: 291 AVAASTANSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAA-LNGGLGATGLTNGT 349
Query: 285 SGFVGSGYPAVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT 338
+G + + A G+Q P Y +L + S++G
Sbjct: 350 AGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQ--------------------SAAGSQ 389
Query: 339 GSG-GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
G ++GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 390 KEGLSFLKGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 449
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 450 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|358413030|ref|XP_610805.5| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 562
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 181/465 (38%), Positives = 245/465 (52%), Gaps = 64/465 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 120 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 179
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 180 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 240 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 299
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 300 MQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY 342
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------ 302
+ P V +S N P P SG G VPGL P+
Sbjct: 343 --LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTATVPGLVAPITNGFAG 400
Query: 303 --PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS----------SSGGTGSGG 342
P+PG GH L + G V SP VA + +P+ S ++ T
Sbjct: 401 VVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAH 457
Query: 343 QI------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+ EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT S
Sbjct: 458 SVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQS 517
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 518 KCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 562
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETK 153
DG + KLF+G +P+N+ E ++ LF +G I +L +L+ KGCAFL Y +
Sbjct: 114 DGTKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCAR 173
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ A+ A A++ + + G + P+ VK AD+E
Sbjct: 174 DSAIKAQTALHEQKTLPGMARPIQVKPADSE 204
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 298 LQYPMPYPGGM---LGHRPLNNSPGSVSPAVANSNPSTSSSGGTGS---GGQIEGPPGAN 351
L P P P G L ++ GS + P S G +G GGQ +G +
Sbjct: 61 LMSPTPLPRGWKVALAPARTQDTSGSYQNRLVLLQPRPSPVGSSGPEPPGGQPDGTKDLD 120
Query: 352 ---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA- 407
LF+ IP+ +++L F+ FGR+ V D TG+ K F++Y + SA A
Sbjct: 121 AIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQ 180
Query: 408 IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A+ L G +Q+K + +++
Sbjct: 181 TALHEQKTLPGMARPIQVKPADSESR 206
>gi|410918518|ref|XP_003972732.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 474
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 246/455 (54%), Gaps = 58/455 (12%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG--------------ALPMGYAPPYNGY-----GY 229
RR Q+ +Q N+ + SL G A G ++G G
Sbjct: 226 QRRLQQQLAQQMQQLNSATTWGSLTGLGGLTPQYLALLQQAASSGNLGAFSGIQQMAAGT 285
Query: 230 QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDL---SSNMGPRNYAMPPSG 286
AS + G M L + G G +N NA+ G+ + + +G +G
Sbjct: 286 TASSNAGAMN-SLTSLGTLQGLAGATVGLNNINALAGSINSMAALNGGLGGAGLTNGTAG 344
Query: 287 FVGSGYPAVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGS 340
+ + A G+Q P Y +L + G GS
Sbjct: 345 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQ-----------------------GAAGS 381
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 382 --QKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDN 439
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 440 PVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 474
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
>gi|426241648|ref|XP_004014701.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 2
[Ovis aries]
Length = 551
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 249/475 (52%), Gaps = 63/475 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 88 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 147
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 148 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 207
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILR S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 208 IEECRILREPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 267
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQY------ 240
RR Q+ +Q N + +G L G P Y QA+ S L +
Sbjct: 268 QRRLQQQLAQQMQQLNTAT-----WGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQM 322
Query: 241 ---RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPG 297
+QN G+ N + S L + P A P+ G+ ++
Sbjct: 323 AGMNALQLQNLATLAGL-----XANPLSTTSSALGALTSPV-AASTPNSTAGAAMNSLTS 376
Query: 298 LQYPMPYPGGMLGHRPLNNSPGSVSPAVA-----NSNPSTSSSGGT-------------- 338
L G +G +N G+++ A + T+ + GT
Sbjct: 377 LGTLQGLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQY 436
Query: 339 ------------------GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAK 380
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAK
Sbjct: 437 AAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAK 496
Query: 381 VFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
VF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 497 VFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 551
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I+++ SRGC F
Sbjct: 168 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILREPDGL-SRGCAF 226
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 227 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 266
>gi|148706792|gb|EDL38739.1| trinucleotide repeat containing 4, isoform CRA_e [Mus musculus]
Length = 447
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 229/447 (51%), Gaps = 45/447 (10%)
Query: 21 QVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK 80
Q+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +A H +K
Sbjct: 14 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQK 73
Query: 81 TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
TLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG
Sbjct: 74 TLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDG 132
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 133 TSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG 192
Query: 201 NLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQ 260
Q FGA Y+ Q + L PM
Sbjct: 193 MFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAIS 244
Query: 261 GNAMRGA--SPDLSSNMGPRNYAMP----PSGFVGSGYPAV---------PGLQYP---M 302
N + +P ++ P A P P+ +GY V P YP
Sbjct: 245 ANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVH 304
Query: 303 PYPGGML--------------GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 348
PYP L H L + SPA A +P + G GP
Sbjct: 305 PYPDEALSAERSAGGVPIMSQAHSWLVMLSAAQSPA-APVDPLQQAYAGM---QHYTGPD 360
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI
Sbjct: 361 GCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAI 420
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR N+PY
Sbjct: 421 QAMNGFQIGMKRLKVQLKRPKDANRPY 447
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 152
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 153 NTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|340380143|ref|XP_003388583.1| PREDICTED: CUGBP Elav-like family member 4-like [Amphimedon
queenslandica]
Length = 494
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 235/456 (51%), Gaps = 68/456 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E VKLFVGQVPKH E L +++ + E+ I++ K TR +GC FV SR+ A+ A
Sbjct: 57 ESVKLFVGQVPKHFEEEDLRPYLEQYGPIGELLILRHKATRQHKGCAFVTYLSRESAELA 116
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
H+K LP + PLQV A + E L K+F+GML K + E+ V ++F +G I++L
Sbjct: 117 QRELHDKVILPTMTRPLQVNAAGTKQEELR-KVFVGMLSKTIDESHVRSMFERFGHIEEL 175
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+GCAF+K+ ++++A +A+ ++G M G+S PLVVK+ADTE+ER AR+
Sbjct: 176 TVLKDKDGYSRGCAFIKFSSRQEAQSAINEMHGSEIMAGASNPLVVKYADTERERHARKM 235
Query: 193 QKAQSQANNLP-NADSQ---HPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
QKA Q L N Q HP F P+ YA LMQ Q
Sbjct: 236 QKAMQQFAELSLNPVFQVLPHPQFFN--PIVYAQ--------------LMQ------QQS 273
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV----------PGL 298
P G P ++ G A L S P + P +GS + PG
Sbjct: 274 PLLSGATPTLSPGGLYSPAPHTLLSPSSPTHVPSP----IGSSHAGATGTGTTAIGSPGG 329
Query: 299 QYPMPYPGGMLG-------------------HRPLNNSPGSVS---PAVANSNPST---- 332
+ PGGM G H PL + S + +NPST
Sbjct: 330 LHHGLAPGGMGGPHTTGLSHNGLHGASSEHIHSPLQSPLHGFSGYGLPYSFANPSTFGVP 389
Query: 333 -SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 391
+ Q EGP G NLFIYH+PQ++GDQEL N F +G ++SAKV+VDK T SK
Sbjct: 390 SPTPPPPLPSSQKEGPEGCNLFIYHLPQDYGDQELVNLFGQYGHIVSAKVYVDKNTQQSK 449
Query: 392 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
CFGFVSY++P SA AI +NG ++G K+LKV+ K+
Sbjct: 450 CFGFVSYDNPQSASTAIFGLNGLEIGHKRLKVEHKK 485
>gi|207028384|ref|NP_001128707.1| CUGBP, Elav-like family member 2 [Xenopus laevis]
gi|197359134|gb|ACH69783.1| RNA binding protein Bruno-like 3b [Xenopus laevis]
Length = 493
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 246/458 (53%), Gaps = 55/458 (12%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGVHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRG----SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
I++ +ILRG S+ + CAF+ + T+ A++A++ MEG S P+VVK+ADT+
Sbjct: 176 IEECRILRGPDGLSRASQHCCAFVTFSTRAMTQNAIKAMHQSQTMEGCSSPIVVKFADTQ 235
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLFGALPM--GYAPPYNGYGYQASGSYGLMQYRL 242
K+++ RR Q+ +Q N + +G L G P Y QA+ S L +
Sbjct: 236 KDKEQRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAF-- 288
Query: 243 PPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS--GYPAVPGLQY 300
G + + N+ GA+ + +++G G G+ G + L
Sbjct: 289 ------SGIQQMAVAASTANSSAGAAMNSLTSLGTLQ------GLAGATVGLNNINALAG 336
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAV-------------------ANSNPSTSSSGGTGSG 341
GG LG L N A+ + S S+ G+
Sbjct: 337 MAALNGG-LGATGLTNGTACTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKE 395
Query: 342 GQI----EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
G + +GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 396 GLLFISSQGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 455
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 456 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 493
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
M + EK ++ E KLF+G V K E + MF F ++E I++ D +RAS+ C
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRASQHC 195
Query: 59 C-FVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
C FV +R A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 196 CAFVTFSTRAMTQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 238
>gi|325189112|emb|CCA23638.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 550
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 243/422 (57%), Gaps = 25/422 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+GQVP+ MTE +LL + + F V ++ II+DK T + RGC F S ++A++AV
Sbjct: 76 MKLFIGQVPRTMTETELLPILEAFGEVVDLTIIRDKLTGSHRGCAFASFASPEDAERAVE 135
Query: 75 ACHNKKTLPGASSPLQVKYADGEL-ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HNK TLP + +PLQV+ A+G+ EHKLFIGM+PK +E + +F +G I ++
Sbjct: 136 ELHNKVTLPDSINPLQVRPAEGQAGAAQEHKLFIGMIPKTATEQAIYDIFGEFGPIDEVF 195
Query: 134 ILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILR Q T SKGCAFLK++ +E A+A++E +NGK M PLVVK+AD+ ++R
Sbjct: 196 ILR-HQPTGQSKGCAFLKFKERESAVASIEQLNGKITMMNGVSPLVVKFADSRRQR---- 250
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ +S N+D+ + PMG NG S + Q+ MQ F
Sbjct: 251 LQRVRST-----NSDTSQAGYWQIPPMGDGS-VNGISLPVSQMQQMQQHY---MQQVQAF 301
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP---PSGFVGSGYPAVPGLQYPMPYPGGM 308
+ G+ + G++ +S M YA+ P G+ S Y + G Y
Sbjct: 302 GTQASGIAPGSVLPGSTSPTNSYMYYNPYALSGAVPYGYTNSLYETMGGPN--ASYSESA 359
Query: 309 LGHRPLNNSPGSVSPAVANSNPS---TSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQE 365
+ + PGS S A++ S +S+GG S Q+EGPPGANLFIYH+P + D +
Sbjct: 360 VHSGSSDVLPGSDSAALSGSMVGMDINASAGGVRSTTQLEGPPGANLFIYHLPHDLTDAD 419
Query: 366 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 425
L AF FG V+SAKV++DK TG SK FGFVSY++ +A NAIA MNG Q+G K+LKVQ
Sbjct: 420 LATAFAPFGTVISAKVYMDKLTGESKGFGFVSYDAAEAADNAIASMNGFQIGSKRLKVQH 479
Query: 426 KR 427
KR
Sbjct: 480 KR 481
>gi|410052930|ref|XP_003953367.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Pan troglodytes]
Length = 484
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 237/464 (51%), Gaps = 63/464 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E ++KD T +GC + +R A K
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIHENAVLKDPYTGMHKGCLPALYCARDSASKL 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTL G + L+ + + KLF+GML K SE +V LF +G I +
Sbjct: 103 KVAVHEQKTLSGVNRVLRCRPGWSAFRGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 162
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 222
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 223 QQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY- 264
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------- 302
+ P V +S N P P SG G AVPGL P+
Sbjct: 265 -LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGV 323
Query: 303 -PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS----------SSGGTGSGGQ 343
P+PG GH L + G V SP VA + +P+ S ++ T
Sbjct: 324 VPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAHS 380
Query: 344 I------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 391
+ EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SK
Sbjct: 381 VPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSK 440
Query: 392 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
CFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 441 CFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 484
>gi|410928558|ref|XP_003977667.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 435
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 234/462 (50%), Gaps = 70/462 (15%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG V + EL +L + S+ +V LF +G+I +
Sbjct: 65 QSALHEQKTLPGLVYSGVVASSSSELLKLPITCIFATARQ--SDEDVRRLFEPFGSIDEC 122
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 123 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 182
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPP-------- 244
Q+ SQ +FG + + + P YN Y QA + + Q L
Sbjct: 183 QQVASQLG-----------IFGPMTLNF-PAYNAYT-QAVNAQLVQQQALVAQSAYLSPV 229
Query: 245 -------MQNQPGF--HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG----SG 291
MQ +GII + +P +N P A P S +G
Sbjct: 230 ATVAAVQMQQMAALNANGII-----ATPITPITPSSGTNTPPAIAATPVSAISAPIGVNG 284
Query: 292 YPAVP----GLQ------------YPMPYPG--GMLGHRPLNNSPGSVSPAVANSNPSTS 333
Y ++P G Q Y YP G++G +P P V+
Sbjct: 285 YSSLPAPTNGQQATEALYTNGVHPYQAAYPAAYGLVG-QPFPQQPTLVAQQHQQPQQQQQ 343
Query: 334 SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 393
EGP G N+FIYH+PQEF D EL F FG V+SAKVFVD+AT SKCF
Sbjct: 344 R----------EGPEGCNIFIYHLPQEFSDSELLQMFLPFGNVISAKVFVDRATNQSKCF 393
Query: 394 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
GFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 394 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 435
>gi|350403945|ref|XP_003486959.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
4-like [Bombus impatiens]
Length = 522
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 222/425 (52%), Gaps = 59/425 (13%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ SR A A NA H K+TLPG + P+QVK AD E R + KLF+GML K +E
Sbjct: 111 GCAFLTYYSRDSAISAQNALHEKRTLPGMNRPIQVKPADSE-NRGDRKLFVGMLSKQQTE 169
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G M G+S L
Sbjct: 170 DDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQTMPGASSSL 229
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL----PMGYAPPYNGYGYQAS 232
VVK+ADTEKERQ RR Q+ + L +P +F A
Sbjct: 230 VVKFADTEKERQLRRMQQMAGNMSLL------NPFVFNQFGAYGAYAQQQAALMAAATAQ 283
Query: 233 GSY----------GLMQYRLPPMQNQPGFHGIIPPVN---QGNAMRGASPDLSSNMGPRN 279
G+Y G + + L M N ++PP + G + GA P L S P N
Sbjct: 284 GTYINPMAALVGAGQLPHALNGMPNP-----VVPPTSGTGTGQPVNGAIPSLPSPTMP-N 337
Query: 280 YAM---PPSGFVGSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS-------- 317
+ M P+G P V P YPG L G L ++
Sbjct: 338 FNMAAQTPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNGEAALQHAAAYPGMQP 397
Query: 318 -PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 370
PG PAV A P T+ + G I GP G NLFIYH+PQEFGD EL F
Sbjct: 398 YPGVAYPAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGELMQMF 457
Query: 371 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 430
FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 458 IPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKD 517
Query: 431 QNKPY 435
++PY
Sbjct: 518 ASRPY 522
>gi|328776307|ref|XP_393833.4| PREDICTED: CUGBP Elav-like family member 4-like [Apis mellifera]
Length = 525
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 172/429 (40%), Positives = 224/429 (52%), Gaps = 64/429 (14%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ SR A A NA H K+TLPG + P+QVK AD E R + KLF+GML K +E
Sbjct: 111 GCAFLTYYSRDSAISAQNALHEKRTLPGMNRPIQVKPADSE-NRGDRKLFVGMLSKQQTE 169
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G M G+S L
Sbjct: 170 DDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQTMPGASSSL 229
Query: 177 VVKWADTEKERQARRAQKAQSQANNLP--NADSQHPSLFGALPMG--------------- 219
VVK+ADTEKERQ RR Q+ + L N +Q FGA
Sbjct: 230 VVKFADTEKERQLRRMQQMAGNMSLLNPFNVFNQ----FGAYGAYAQQQAALMAAATAQG 285
Query: 220 -YAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVN---QGNAMRGASPDLSSNM 275
Y P + +G + + L M N ++PP + G + GA P L S
Sbjct: 286 TYINPMAALAHVGAGQ---LPHALNGMPNP-----VVPPTSGTGTGQPVNGAIPSLPSPT 337
Query: 276 GPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS---- 317
P N+ M P+G P V P YPG L G L ++
Sbjct: 338 MP-NFNMAAQTPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNGEAALQHAAAYP 396
Query: 318 -----PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQEL 366
PG PAV A P T+ + G I GP G NLFIYH+PQEFGD EL
Sbjct: 397 GMQPYPGVAYPAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGEL 456
Query: 367 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426
F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLK
Sbjct: 457 MQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLK 516
Query: 427 RDNKQNKPY 435
R ++PY
Sbjct: 517 RPKDASRPY 525
>gi|444516747|gb|ELV11280.1| Poly [ADP-ribose] polymerase 6 [Tupaia chinensis]
Length = 972
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 153/412 (37%), Positives = 210/412 (50%), Gaps = 84/412 (20%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 3 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG S P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 63 KAQSALHEQKTLPGMSRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGQIQ 122
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TS+GCAF+K+ ++ + AL+ ++G M G+S LVVK ADT++ER R
Sbjct: 123 ECTVLRSPDGTSRGCAFVKFGSQGE---ALQGLHGSRTMAGASSSLVVKLADTDRERALR 179
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G A G+Y
Sbjct: 180 RMQQMAGQLGAF------HPA---PLPLG-----------ACGAY--------------- 204
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
N GA P S+ + P YP YP
Sbjct: 205 -------TTATNGQPGADPLYSNGLSP----------------------YPAAYPS---A 232
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 370
+ P++ + P ++ P Q EGP G NLFIYH+PQEFGD EL F
Sbjct: 233 YAPVSTA----CPQQPSALPQQ----------QREGPEGCNLFIYHLPQEFGDAELTQTF 278
Query: 371 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 422
FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LK
Sbjct: 279 LPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLK 330
>gi|198431689|ref|XP_002121627.1| PREDICTED: similar to CUG triplet repeat, RNA binding protein 2
[Ciona intestinalis]
Length = 498
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 247/485 (50%), Gaps = 66/485 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+F+GQ+PK E+++ + + + ++NI+++K + S+GCCFV +R+ A A
Sbjct: 18 DAIKMFIGQIPKTWVESEVREFLEGYGPIYQLNILREKGSVMSKGCCFVTFYTRKAALAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N HN KTLPG +Q+K AD E + + KLFIGM+ K ++E ++ LF +G I++
Sbjct: 78 QNELHNMKTLPGMHHCVQMKPADSENKSEDRKLFIGMISKKMTEQDLRQLFCPFGNIEEC 137
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT--EKERQAR 190
+IL SKGCAF+ Y + A A+ ++ MEG S P+VVK AD+ +KER+
Sbjct: 138 RILMNPDGVSKGCAFVTYSKRVSAQNAIRNMHQSTTMEGCSAPIVVKIADSPKDKERKKT 197
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPM--------GYAPPYNGYGYQASGSYGLMQYRL 242
++Q A Q N N L P+ Y P N + SG + Q +
Sbjct: 198 QSQLAM-QLNQFSNQWKNLSGLAALAPVLQSLACNNQYNAPSNQHN---SGVFSTTQLQQ 253
Query: 243 ---------PPMQNQP------------GFHGIIPPVNQGNAMRGASPD--------LSS 273
+ NQP G GI +Q ASP +S
Sbjct: 254 ALTIAAAAQTLLSNQPSSVSHNNSNSVPGSSGISSMTSQYGGNVCASPSGTSYRSHSHNS 313
Query: 274 NMGPRNYAMP-PSGFVGSGYPAVPGLQYPMPYPGGMLGHRP-------LNNSPGSVSPAV 325
NM + ++ P PS + +G + P+ L + LN+SP S + +
Sbjct: 314 NMWAQQHSAPYPSAGMNNGMSSGCSSTSPLDPMTMNLAQQSGSNLTLDLNHSPSSTATGI 373
Query: 326 --------ANSNPSTSSS-------GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 370
A ++P++ + + +G EGP G+NLFIYH+P F D +L F
Sbjct: 374 NPTAHMLAALTSPTSMYNQSMMHPHNSSPAGSHKEGPEGSNLFIYHLPTHFTDHDLMQTF 433
Query: 371 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 430
FG ++SAKVF+DK T +SKCFGFVSY++PASAQ+AI M+G Q+G K+LKVQLKR
Sbjct: 434 FTFGTIVSAKVFIDKQTNLSKCFGFVSYDNPASAQHAIQAMHGFQIGMKRLKVQLKRPKG 493
Query: 431 QNKPY 435
++K Y
Sbjct: 494 ESKAY 498
>gi|326934283|ref|XP_003213221.1| PREDICTED: CUGBP Elav-like family member 5-like [Meleagris
gallopavo]
Length = 379
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 161/413 (38%), Positives = 216/413 (52%), Gaps = 54/413 (13%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++E + T S+GC F+ +R A KA A H +KTLPG + P+QVK AD E
Sbjct: 3 IEESLTLVMSTWNLSQGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG 62
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
+ KLF+GML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+
Sbjct: 63 GDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAI 122
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGY 220
A++G M G+S LVVK+ADT+KER RR Q+ Q PSL LP
Sbjct: 123 HALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIF------TPSL--TLPFS- 173
Query: 221 APPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
PY+ Y + LMQ + + G + ++ G A SP +G +
Sbjct: 174 --PYSAY------AQALMQQQTTVLSTSHGSY-----LSPGVAF---SPCHIQQIGAVSL 217
Query: 281 AMPPSGFVGSGYPAVPGLQY------PMPYPGGMLGHRPLNNSPGS---VSPAVANSNPS 331
+G PA P Q P G G + + PG+ +SP + P+
Sbjct: 218 ---------NGLPAAPIAQTSGEGTDSAPLSSGRPGFK--VSPPGARFVLSPWITAVYPT 266
Query: 332 TSSS---------GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
TS + Q EGP G NLFIYH+PQEFGD EL F FG ++S+KVF
Sbjct: 267 TSITPIAQSIPQPPPVLQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVF 326
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR N PY
Sbjct: 327 MDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY 379
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ S+GC FV S EA A++A
Sbjct: 66 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 124
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 125 LHGSQTMPGASSSLVVKFADTDKERTLRRM 154
>gi|348667006|gb|EGZ06832.1| hypothetical protein PHYSODRAFT_353005 [Phytophthora sojae]
Length = 507
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 228/424 (53%), Gaps = 30/424 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ M E L + + F ++++ II+DK T A RGC F +R A+KAV
Sbjct: 36 VKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAVQ 95
Query: 75 ACHNKKTLPGASSPLQVKYADGEL-ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HNK TLP + +PLQV+ A+G+ EHKLFIGM+PK EA + +F ++GTI+++
Sbjct: 96 ELHNKVTLPQSINPLQVRPAEGQAGASQEHKLFIGMIPKTADEAAIREVFELFGTIEEVY 155
Query: 134 ILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR + SKGCAFLK++ + ALAA+E +NG M+ + PLVVK+AD+ ++R R
Sbjct: 156 ILRHPATGQSKGCAFLKFKERSSALAAIEEVNGNVTMDRGTSPLVVKFADSRRQRLQRAR 215
Query: 193 QKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
A + P LP G A P Q P
Sbjct: 216 NLAAAANAYWP------------LPPGAGLAFPQLQQLQQQYMQQMQAFGAQAAAGLNPA 263
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG-SGYPAVPGLQYPMPYPGGML 309
G+ PV G+ + P +A +G G G P V G + + GG+
Sbjct: 264 VAGLGSPVEATAGGPGSPTNSFMYYNPYGFAAGAAGPYGFGGLPNVGGAGFDI-QAGGLG 322
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNA 369
L G A A ++ +TS Q+EGP GANLFIYH+P + D +L A
Sbjct: 323 AGLDLQ---GQGVEAAAKASRTTS---------QLEGPTGANLFIYHLPHDLTDADLATA 370
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
F FG V+SAKV++DK TG SK FGFVSY+S +A AIA MNG Q+G K+LKVQ KR +
Sbjct: 371 FAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIH 430
Query: 430 KQNK 433
++N
Sbjct: 431 QRND 434
>gi|363743697|ref|XP_423569.3| PREDICTED: CUGBP Elav-like family member 5 [Gallus gallus]
Length = 404
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 212/420 (50%), Gaps = 56/420 (13%)
Query: 54 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 113
+++GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K
Sbjct: 3 SAKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQ 62
Query: 114 VSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 173
SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 63 QSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS 122
Query: 174 VPLVVKWADTEKERQARRAQKAQSQAN------NLPNAD---------SQHPSLFGALPM 218
LVVK+ADT+KER RR Q+ Q LP + Q ++
Sbjct: 123 SSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHG 182
Query: 219 GYAPP---YNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSS-- 273
Y P ++ Q G+ L P+ G H PP+ AM G +S+
Sbjct: 183 SYLSPGVAFSPCHIQQIGAVSLNGLPAAPIAQTSGLHS--PPLLGTTAMPGLVAPISNGF 240
Query: 274 -------NMGPRNYAMPPSGFV----------GSGYPAVPGL-QYPMPYPGGMLGHRPLN 315
N P + +GFV + +PA G+ QY YP
Sbjct: 241 TGVVPFPNGHPALETVYTNGFVPYSAQSPSVAETLHPAFSGVQQYAAVYPT--------- 291
Query: 316 NSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGR 375
S++P S Q EGP G NLFIYH+PQEFGD EL F FG
Sbjct: 292 ---TSITPIAQ----SIPQPPPVLQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGN 344
Query: 376 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR N PY
Sbjct: 345 IISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY 404
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ S+GC FV S EA A++A
Sbjct: 53 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 111
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 112 LHGSQTMPGASSSLVVKFADTDKERTLRRM 141
>gi|410921164|ref|XP_003974053.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Takifugu
rubripes]
Length = 500
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 232/469 (49%), Gaps = 86/469 (18%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 74 DQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAI 133
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTI 129
KA NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I
Sbjct: 134 KAQNALHEQKTLPGMTRPIQVKPADSESRGGKDRKLFVGMLNKQQTEEDVYRLFEPYGVI 193
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER
Sbjct: 194 EECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTI 253
Query: 190 RRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
RR Q+ Q FG A P++ Y +S ++ LMQ + M
Sbjct: 254 RRMQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQQQAAIMAASH 296
Query: 250 GFH---GIIPPVNQGNAMRGASPDL--SSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPY 304
G + + P Q + M + + + M P + PP+ S AVP + P+
Sbjct: 297 GGYLTPSVAFPATQIHQMGALNINSLPPTPMTPVSGDSPPANITTS---AVPSIVTPIVN 353
Query: 305 PGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG----------------------- 341
+ H+P N P +V N P S+ T +
Sbjct: 354 GFTGIPHQP-NGHP-AVETMYTNGLPPYSTQSPTAADTLQQAFTGVQQYTAIYPATTLTP 411
Query: 342 -GQI--------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 386
GQ EGP G NLFIYH+PQEFGD EL F
Sbjct: 412 IGQTLPQPPQVIQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLP-------------- 457
Query: 387 TGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
FGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 458 ------FGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 500
>gi|350580719|ref|XP_003123087.3| PREDICTED: CUGBP, Elav-like family member 5 [Sus scrofa]
Length = 444
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 217/421 (51%), Gaps = 64/421 (15%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 46 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQS 105
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 106 EEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 165
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSY 235
LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y +
Sbjct: 166 LVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQ 208
Query: 236 GLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GY 292
LMQ + + + + P V +S N P P SG G
Sbjct: 209 ALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGT 266
Query: 293 PAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS--- 333
AVPGL P+ P+PG GH L + G V SP VA + +P+ S
Sbjct: 267 AAVPGLVAPITNGFAGVVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQ 323
Query: 334 -------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELGNAFQAFG 374
++ T + EGP G NLFIYH+PQEFGD EL F FG
Sbjct: 324 QYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFG 383
Query: 375 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR P
Sbjct: 384 NIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHP 443
Query: 435 Y 435
Y
Sbjct: 444 Y 444
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 83 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 140
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 141 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 182
>gi|219109993|ref|XP_002176749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411284|gb|EEC51212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 499
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 219/428 (51%), Gaps = 66/428 (15%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
S ++ +KLFVGQVPK M+E + F F + +V II+DK T RGC FV
Sbjct: 112 SADNDDGEDDPMKLFVGQVPKAMSEEDVFPTFDSFGPLKDVAIIRDKHTGLHRGCAFVTY 171
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S +A++A A H+ T PGA QVK A+ + E+KLF+GML + +E E+ LF
Sbjct: 172 WSAADAERAQEALHDTFTFPGARRAAQVKPAEPSVP--ENKLFVGMLSRKATEVEIRELF 229
Query: 124 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
+G I+++ ++R + +SK AFL+Y + A+ A+E +N + MEG++ PL+V++AD
Sbjct: 230 EPFGEIREVYMIRNADGSSKCAAFLRYMKRGAAVQAIETLNNIYMMEGAARPLIVRFADN 289
Query: 184 EKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA--PPYNGYGYQASGSYGLMQYR 241
+ +R R+ + + + A+ GYA PP+
Sbjct: 290 KHQRHQRQIRNIRRH------------EMIAAMGGGYATYPPH----------------- 320
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP-PSGFVGSGYPAVPGLQY 300
+Q Q G G GASP Y +P P +V + Y G
Sbjct: 321 ---VQVQMGMPG----------HPGASP---------QYTVPVPPHYVEAAYGPPNGA-- 356
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQ-IEGPPGANLFIYHIPQ 359
PMP GH P P +P A P +S + + EGP GANLF+YH+P
Sbjct: 357 PMP------GH-PYMYPPQQYAPTPAYIYPEHTSEETKPTNNRPREGPAGANLFVYHLPH 409
Query: 360 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 419
+ D +L AF FG V+SAKV+VDK +G SK FGFVSY+S +A+ AI MNG Q+G K
Sbjct: 410 DLTDADLATAFNPFGNVISAKVYVDKYSGESKGFGFVSYDSVIAAEAAIEQMNGFQIGNK 469
Query: 420 KLKVQLKR 427
+LKVQ KR
Sbjct: 470 RLKVQHKR 477
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 326 ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 385
A+ N SS + E P LF+ +P+ ++++ F +FG + + DK
Sbjct: 100 AHYNGGDSSGNASADNDDGEDDP-MKLFVGQVPKAMSEEDVFPTFDSFGPLKDVAIIRDK 158
Query: 386 ATGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLK 426
TG+ + FV+Y S A A+ A A+ + G + Q+K
Sbjct: 159 HTGLHRGCAFVTYWSAADAERAQEALHDTFTFPGARRAAQVK 200
>gi|301100224|ref|XP_002899202.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262104119|gb|EEY62171.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 496
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 226/424 (53%), Gaps = 32/424 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ M E L + + F ++++ II+DK T A RGC F +R A+KAV
Sbjct: 32 VKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAVQ 91
Query: 75 ACHNKKTLPGASSPLQVKYADGEL-ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HNK TLP + +PLQV+ A+G+ EHKLFIGM+PK EA + +F ++G+I+++
Sbjct: 92 ELHNKVTLPQSINPLQVRPAEGQAGASQEHKLFIGMIPKTADEAAIRDVFELFGSIEEVY 151
Query: 134 ILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR + SKGCAFLK++ + ALAA+E +NG M+ + PLVVK+AD+ R
Sbjct: 152 ILRHPATGQSKGCAFLKFKERSSALAAIEEVNGIVTMDRGTSPLVVKFADS-------RR 204
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ Q N ++ P GA G A P Q P
Sbjct: 205 QRLQRARNLAAATNAYWPLPPGA---GLAFPQLQQLQQQYMQQMQAFGAQAAAGMSPTVA 261
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML 309
G+ PV + G+ + P +A P GF G P V + M G+
Sbjct: 262 GLGSPVGATASGPGSPTNSFMYYNPYGFAAGAAAPYGF--GGMPNVAAAGFDMQT--GLG 317
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNA 369
L A ++ +TS Q+EGP GANLFIYH+P + D +L A
Sbjct: 318 ASLDLQGQ----GAEAAKASRTTS---------QLEGPTGANLFIYHLPHDLTDADLATA 364
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
F FG V+SAKV++DK TG SK FGFVSY+S +A AIA MNG Q+G K+LKVQ KR +
Sbjct: 365 FAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIH 424
Query: 430 KQNK 433
+++
Sbjct: 425 QRSD 428
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYE 151
YAD + KLF+G +P+ + E ++ + ++G ++DL I+R +GCAF Y
Sbjct: 22 YADPQQHNGPVKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYF 81
Query: 152 TKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
T++ A A++ ++ K + S PL V+ A+
Sbjct: 82 TRDAAEKAVQELHNKVTLPQSINPLQVRPAE 112
>gi|440912153|gb|ELR61745.1| CUGBP Elav-like family member 5, partial [Bos grunniens mutus]
Length = 398
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 216/420 (51%), Gaps = 64/420 (15%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 1 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 60
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 61 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 120
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VVK+ADT+KER RR Q+ Q L PSL LP PY+ Y +
Sbjct: 121 VVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQA 163
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYP 293
LMQ + + + + P V +S N P P SG G
Sbjct: 164 LMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTT 221
Query: 294 AVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS---- 333
AVPGL P+ P+PG GH L + G V SP VA + +P+ S
Sbjct: 222 AVPGLVAPITNGFAGVVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQ 278
Query: 334 ------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGR 375
++ T + EGP G NLFIYH+PQEFGD EL F FG
Sbjct: 279 YTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGN 338
Query: 376 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 339 IISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 398
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 37 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 94
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 95 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 136
>gi|354488715|ref|XP_003506512.1| PREDICTED: CUGBP Elav-like family member 5-like [Cricetulus
griseus]
Length = 569
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 210/430 (48%), Gaps = 85/430 (19%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 173 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 232
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 233 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 292
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG-------- 228
VVK+ADT++ER RR Q+ Q L PSL LP PY+ Y
Sbjct: 293 VVKFADTDRERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQT 341
Query: 229 --YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 286
SGSY PP + Q A +S N P P SG
Sbjct: 342 TVLSTSGSYLSPGVAFPPCH-----------IQQIGA-------VSLNGLPATPITPASG 383
Query: 287 FVGS---GYPAVPGLQYPMP--YPGGMLGHRPLNNSPGSVSPAVAN-------SNPSTSS 334
G AVPGL P+P +PG + P S ++ A AN +P+ +
Sbjct: 384 LHSPPLLGTAAVPGLVAPIPNAFPGVL----PFPGSHPALETAYANGLVPYPAQSPTVAE 439
Query: 335 SGGTGSGG-----------------------------QIEGPPGANLFIYHIPQEFGDQE 365
S G Q EGP G NLFIYH+PQEFGD E
Sbjct: 440 SLHPAFSGVQQYTAMYPTAAIAPVAHCVPQPPHLLQQQREGPEGCNLFIYHLPQEFGDTE 499
Query: 366 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 425
L F FG ++S+KVF+D+AT SKCFGFVS++ PASAQ AI MNG Q+G K+LKVQL
Sbjct: 500 LTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDHPASAQAAIQAMNGFQIGMKRLKVQL 559
Query: 426 KRDNKQNKPY 435
KR PY
Sbjct: 560 KRPKDPGHPY 569
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 209 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 266
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 267 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDRERTLRRM 308
>gi|449270204|gb|EMC80905.1| CUG-BP- and ETR-3-like factor 5, partial [Columba livia]
Length = 403
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 216/421 (51%), Gaps = 63/421 (14%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQS 60
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 61 EDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 120
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSY 235
LVVK+ADT+KER RR Q+ Q PSL LP PY+ Y +
Sbjct: 121 LVVKFADTDKERTLRRMQQMVGQLGIF------TPSL--TLPFS---PYSAY------AQ 163
Query: 236 GLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GY 292
LMQ + + G + + P V +S N P P SG G
Sbjct: 164 ALMQQQTTVLSTSHGSY-LSPGVAFSPCHIQQIGAVSLNGLPAAPIAPASGLHSPPLLGT 222
Query: 293 PAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS--------- 328
A+PGL P+ P+P G H L + G V SP+VA +
Sbjct: 223 AAMPGLVAPISNGFTGVIPFPNG---HPTLETVYTNGLVPYSAQSPSVAETLHPAFTGVQ 279
Query: 329 -----NPSTSSSGGTGSGGQI---------EGPPGANLFIYHIPQEFGDQELGNAFQAFG 374
P+T+ + S Q EGP G NLFIYH+PQEFGD EL F FG
Sbjct: 280 QYAAVYPTTTITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFG 339
Query: 375 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR N P
Sbjct: 340 NIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHP 399
Query: 435 Y 435
Y
Sbjct: 400 Y 400
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 38 ADSESRGGRDR-KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKF 95
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 96 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 137
>gi|395513595|ref|XP_003761008.1| PREDICTED: CUGBP Elav-like family member 5 [Sarcophilus harrisii]
Length = 429
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 217/421 (51%), Gaps = 64/421 (15%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 30 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 89
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 90 EDVLRLFQPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 149
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VVK+ADT+KER RR Q+ Q PSL LP PY+ Y +
Sbjct: 150 VVKFADTDKERTLRRMQQMVGQLGIF------TPSL--TLPFS---PYSAY------AQA 192
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYP 293
LMQ + + G + + P V +S N P P SG G
Sbjct: 193 LMQQQTTVLSTSHGSY-LSPGVAFSPCHIQQIGAVSLNGIPATPIAPASGLHSPPLLGTA 251
Query: 294 AVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS---- 333
AVPGL P+ P+PGG H L + G V SP++A + +P+ S
Sbjct: 252 AVPGLVTPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPSMAETLHPAFSGVQQ 308
Query: 334 ------SSGGTGSGGQI-------------EGPPGANLFIYHIPQEFGDQELGNAFQAFG 374
++ T + EGP G NLFIYH+PQEFGD EL F FG
Sbjct: 309 YTAMYPTAAITPIAHSVPQPPPIIQQQQQREGPEGCNLFIYHLPQEFGDSELMQMFLPFG 368
Query: 375 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR + P
Sbjct: 369 NIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDASHP 428
Query: 435 Y 435
Y
Sbjct: 429 Y 429
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 66 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGN-SKGCAFVKF 123
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 124 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 165
>gi|340725300|ref|XP_003401010.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 3 [Bombus
terrestris]
Length = 384
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 204/394 (51%), Gaps = 59/394 (14%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K +E +V LF+ +GTI++ ILRG +S+GCAF
Sbjct: 4 PIQVKPADSE-NRGDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K + ++ALAA+ ++G M G+S LVVK+ADTEKERQ RR Q+ + L
Sbjct: 63 VKLSSHQEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAGNMSLL----- 117
Query: 208 QHPSLFGAL----PMGYAPPYNGYGYQASGSY----------GLMQYRLPPMQNQPGFHG 253
+P +F A G+Y G + + L M N
Sbjct: 118 -NPFVFNQFGAYGAYAQQQAALMAAATAQGTYINPMAALVGAGQLPHALNGMPNP----- 171
Query: 254 IIPPVN---QGNAMRGASPDLSSNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGG 307
++PP + G + GA P L S P N+ M P+G P V P YPG
Sbjct: 172 VVPPTSGTGTGQPVNGAIPSLPSPTMP-NFNMAAQTPNGQPAGSDPGVYTNGIPQTYPGH 230
Query: 308 ML-----------GHRPLNNS---------PGSVSPAV------ANSNPSTSSSGGTGSG 341
L G L ++ PG PAV A P T+ + G
Sbjct: 231 ALHLSIPAQGLPNGEAALQHAAAYPGMQPYPGVAYPAVYGQFPQAIPQPMTAVAPTQREG 290
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P
Sbjct: 291 CSISGPEGCNLFIYHLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNP 350
Query: 402 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
ASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 351 ASAQTAIQAMNGFQIGMKRLKVQLKRPKDASRPY 384
>gi|299472576|emb|CBN78228.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 583
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 222/437 (50%), Gaps = 79/437 (18%)
Query: 46 IIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGEL--ERL-- 101
+I+D+ T A RGC F+ +R+ ++AV+ HNK LP A +P+QV+ AD ++ +RL
Sbjct: 2 VIRDRQTDAHRGCAFLTYQTREAGERAVDKFHNKVKLPNAHNPVQVRPADSQMGDDRLGP 61
Query: 102 ---------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYET 152
E+KLF+GMLP + + ++ +FS +G I ++ +R T KGCAF+K+ T
Sbjct: 62 NGRVAPVDRENKLFVGMLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFST 121
Query: 153 KEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSL 212
+ A+AA+EA++ K M+G++ LVVK+AD +K AQ A+ +P P
Sbjct: 122 RSAAIAAIEALHEKCTMDGATRALVVKFADVKK------AQTAKGWM--VP------PDA 167
Query: 213 FGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLS 272
GA P+GY Y+G G G + PG + + R PD +
Sbjct: 168 RGASPLGYNGRYHGGGTSVGGYWQAT--------GAPGGRDVY------SKGREVYPDYA 213
Query: 273 SNMGPRNYAMPPSG----FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNS------PGSVS 322
++ G PP G G YP PG P GG + + LN S S+S
Sbjct: 214 NHRGYPYQVGPPGGGYSQSYGPEYPHHPGQ--PQARHGGYVAYSNLNPSHYPAQVDRSLS 271
Query: 323 PAVANSNPSTS-------------------------SSGGTGSGGQ-IEGPPGANLFIYH 356
P+ + S + S G G G + EGPPGANLFIYH
Sbjct: 272 PSSGAGDRSHNFSSPPGGPVPGGIGGMGGMRGDGRDSRGEHGGGARPQEGPPGANLFIYH 331
Query: 357 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416
+P + D +L AF FG V+SAKVF+DK T SK FGFVSY PA A+ AI+ MNG Q+
Sbjct: 332 LPNDLTDADLATAFAPFGHVVSAKVFLDKRTQESKGFGFVSYNHPAEAEVAISKMNGFQI 391
Query: 417 GGKKLKVQLKRDNKQNK 433
G K+LKVQ K+ + ++
Sbjct: 392 GSKRLKVQHKKADHGDR 408
>gi|124513886|ref|XP_001350299.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23615716|emb|CAD52708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 509
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 215/430 (50%), Gaps = 85/430 (19%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK++ E QL +F+E+ +V+EV II+DK T + FV S EAD A+
Sbjct: 85 IKLFIGRVPKNIEEDQLRPIFEEYGIVNEVVIIRDKITNVHKSSAFVKMASISEADNAIR 144
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+N+KTL LQVKYA GEL +L + KLFIG LPKN++E + +F
Sbjct: 145 LLNNQKTLDAQLGSLQVKYASGELNKLGFPQNIESGVDQAKLFIGSLPKNITEDNIKEMF 204
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YGT++++ I++ S KGC+F+K+ KEQAL A++++NGK +EG + P+ V++A+
Sbjct: 205 SPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQALYAIKSLNGKKTLEGCTRPVEVRFAE 264
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
+ +Q + +P+ L
Sbjct: 265 PKSSKQPQ-------------------------IPL----------------------TL 277
Query: 243 PPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-----AVPG 297
PMQN P P ++ N + + +N PR + G G P
Sbjct: 278 QPMQNPPHAMAPQPSISSPNNINFGNNFSVNNNYPRQVGPWKEYYSGEGRPYYYNEQTNT 337
Query: 298 LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHI 357
Q+ MP L +NNS AN + + SS GPPGANLFI+H+
Sbjct: 338 TQWEMPKEFETLF---MNNS--------ANMHNLSESS----------GPPGANLFIFHV 376
Query: 358 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 417
P E+ +L AF FG +LSA++ +K TG ++ F FVSY+S SA AI+ MNG
Sbjct: 377 PNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYDSLESAAAAISQMNGFMAL 436
Query: 418 GKKLKVQLKR 427
KKLKV +K+
Sbjct: 437 NKKLKVTVKK 446
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 178 ESGVDQAKLFIGSLPKNITEDNIKEMFSPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQ 237
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+ + + KKTL G + P++V++A+
Sbjct: 238 ALYAIKSLNGKKTLEGCTRPVEVRFAE 264
>gi|83315537|ref|XP_730836.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23490683|gb|EAA22401.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana, putative
[Plasmodium yoelii yoelii]
Length = 440
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 218/431 (50%), Gaps = 91/431 (21%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+ E QL +F+EF +V+EV II+DK T + FV S EAD A+
Sbjct: 15 IKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIR 74
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPKN++E + +F
Sbjct: 75 SLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMF 134
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 135 SVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLEGCNRPVEVRFAE 194
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
+ +Q AQSQ +
Sbjct: 195 PKSSKQ------AQSQVG-----------------------------------------I 207
Query: 243 PPMQNQPGFHGIIPPVNQG---NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-----A 294
P+QN P HGI P + G N G + +++N PR + + G G P
Sbjct: 208 QPLQNAP--HGISPQAHPGTPNNINYGNNFGVNNNY-PRQVGVWKEYYSGEGRPYYYNEQ 264
Query: 295 VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFI 354
Q+ MP L +NN+P N S SS GPPGANLFI
Sbjct: 265 TNTTQWEMPKEFETLF---MNNNPNI-------HNLSDSS-----------GPPGANLFI 303
Query: 355 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 414
+H+P E+ +L AF FG +LSA++ +K TG ++ F FVSYE+ SA AI+ MNG
Sbjct: 304 FHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYENIESAAAAISQMNGF 363
Query: 415 QLGGKKLKVQL 425
KKLKV +
Sbjct: 364 MALNKKLKVTV 374
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 58/87 (66%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 108 ESGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 167
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+++ + KKTL G + P++V++A+
Sbjct: 168 ALYAISSLNGKKTLEGCNRPVEVRFAE 194
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LFI +P+ + +++L F+ FG V + DK T + K FV S + A N
Sbjct: 12 PVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADN 71
Query: 407 AIAMMNG-----CQLGGKKLK 422
AI +N QLG ++K
Sbjct: 72 AIRSLNNQRTLDQQLGSLQVK 92
>gi|340725298|ref|XP_003401009.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 2 [Bombus
terrestris]
Length = 374
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 152/380 (40%), Positives = 198/380 (52%), Gaps = 41/380 (10%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K +E +V LF+ +GTI++ ILRG +S+GCAF
Sbjct: 4 PIQVKPADSENRGEDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K + ++ALAA+ ++G M G+S LVVK+ADTEKERQ RR Q A N+
Sbjct: 64 VKLSSHQEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRM---QQMAGNM---SL 117
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVN---QGNAM 264
+P +F G Y + + PM G + +N G +
Sbjct: 118 LNPFVFNQF--GAYGAYAQQQAALMAAATAQGTYINPMAALVGAGQLPHALNGTGTGQPV 175
Query: 265 RGASPDLSSNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML-----------G 310
GA P L S P N+ M P+G P V P YPG L G
Sbjct: 176 NGAIPSLPSPTMP-NFNMAAQTPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNG 234
Query: 311 HRPLNNS---------PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIY 355
L ++ PG PAV A P T+ + G I GP G NLFIY
Sbjct: 235 EAALQHAAAYPGMQPYPGVAYPAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIY 294
Query: 356 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 415
H+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q
Sbjct: 295 HLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQ 354
Query: 416 LGGKKLKVQLKRDNKQNKPY 435
+G K+LKVQLKR ++PY
Sbjct: 355 IGMKRLKVQLKRPKDASRPY 374
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ E KLFVG + K TE + +F F ++E I++ +SRGC FV S
Sbjct: 11 DSENRGEDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSH 69
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
QEA A+N H +T+PGASS L VK+AD E ER ++
Sbjct: 70 QEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRM 108
>gi|281345849|gb|EFB21433.1| hypothetical protein PANDA_019092 [Ailuropoda melanoleuca]
Length = 512
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 162/501 (32%), Positives = 243/501 (48%), Gaps = 86/501 (17%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 20 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 80 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 139
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 140 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 199
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGL--------- 237
RR Q+ +Q N + +G L G P Y QA+ S L
Sbjct: 200 QRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQM 254
Query: 238 ------MQYRLPPMQN---QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 288
Q+ P +PG HG N + S L + P A P+
Sbjct: 255 AGNKEGKQFARSPTAGKVAEPGSHGTT--TTNANPLSTTSSALGALTSPV-AASTPNSTA 311
Query: 289 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPS----------TSSSGGT 338
G+ ++ L G +G +N G+++ + N + +GG
Sbjct: 312 GAAMNSLTSLGTLQGLAGATVGLNNINALAGTINTLLRPRNSDLLLKEFSGCMAALNGGL 371
Query: 339 GSGGQIEGPPGA--------------------NLFIYHIPQE---FGDQELG----NAF- 370
G+ G G G L+ + Q+ G Q+ G N F
Sbjct: 372 GATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFI 431
Query: 371 ----QAFG------------RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 414
Q FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG
Sbjct: 432 YHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 491
Query: 415 QLGGKKLKVQLKRDNKQNKPY 435
Q+G K+LKVQLKR +KPY
Sbjct: 492 QIGMKRLKVQLKRSKNDSKPY 512
>gi|340725296|ref|XP_003401008.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 1 [Bombus
terrestris]
Length = 373
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 199/380 (52%), Gaps = 42/380 (11%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K +E +V LF+ +GTI++ ILRG +S+GCAF
Sbjct: 4 PIQVKPADSE-NRGDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K + ++ALAA+ ++G M G+S LVVK+ADTEKERQ RR Q A N+
Sbjct: 63 VKLSSHQEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRM---QQMAGNM---SL 116
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVN---QGNAM 264
+P +F G Y + + PM G + +N G +
Sbjct: 117 LNPFVFNQF--GAYGAYAQQQAALMAAATAQGTYINPMAALVGAGQLPHALNGTGTGQPV 174
Query: 265 RGASPDLSSNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML-----------G 310
GA P L S P N+ M P+G P V P YPG L G
Sbjct: 175 NGAIPSLPSPTMP-NFNMAAQTPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNG 233
Query: 311 HRPLNNS---------PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIY 355
L ++ PG PAV A P T+ + G I GP G NLFIY
Sbjct: 234 EAALQHAAAYPGMQPYPGVAYPAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIY 293
Query: 356 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 415
H+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q
Sbjct: 294 HLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQ 353
Query: 416 LGGKKLKVQLKRDNKQNKPY 435
+G K+LKVQLKR ++PY
Sbjct: 354 IGMKRLKVQLKRPKDASRPY 373
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ +SRGC FV S QEA A+N
Sbjct: 19 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINT 77
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 78 LHGSQTMPGASSSLVVKFADTEKERQLRRM 107
>gi|223996717|ref|XP_002288032.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
gi|220977148|gb|EED95475.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
Length = 356
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 207/423 (48%), Gaps = 78/423 (18%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQVPK + E L +F+ + + ++ +I+D+ T RGC FV S ++A + VN
Sbjct: 2 LKLFVGQVPKTLAEEDLALLFEPYGRILDMTVIRDRRTGTHRGCAFVTYESGEDAMRVVN 61
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEH---------KLFIGMLPKNVSEAEVSALFSI 125
H K GA P QV+ A GE+E + KLF+G LP+ E V LF+
Sbjct: 62 EMHGKYRFEGAMWPAQVRPAQGEIEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFTS 121
Query: 126 YGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG I + I++ +K GCAF+K+ ++ A AA++A++G+ +EG P+ VK+AD
Sbjct: 122 YGDITGIYIIKKRNNEAKNGCAFVKFRERDMAQAAIDALDGEVHLEGVDKPIRVKFADQ- 180
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPP 244
K Q ++ S+HP G +P QA Y M +R
Sbjct: 181 --------NKGQYHHRSMSGGGSRHPG-HGVIP------------QAHDIY--MNHRGHV 217
Query: 245 MQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPY 304
+ PG++ PP + SPD S + PP+ + PG+ P
Sbjct: 218 VGAAPGYYMGHPPGSMSPVY--PSPDEYSQHA--HDGTPPAAMM------TPGVHPP--- 264
Query: 305 PGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQ 364
P + + P EGP GANLFIYH+P + D
Sbjct: 265 ------------------PLMVPARPR-------------EGPAGANLFIYHLPIDLTDA 293
Query: 365 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 424
+L AF FG V+SAKV+VD+ TG SK FGFVSY+S +A+ AI MNG Q+G K+LKVQ
Sbjct: 294 DLATAFNPFGHVISAKVYVDRYTGESKGFGFVSYDSVMAAELAIEQMNGFQIGNKRLKVQ 353
Query: 425 LKR 427
KR
Sbjct: 354 HKR 356
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
+ E E+ +E KLFVGQ+P+ E + +F + + + IIK + A GC F
Sbjct: 85 IEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFTSYGDITGIYIIKKRNNEAKNGCAF 144
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
V R A A++A + L G P++VK+AD + H+ G
Sbjct: 145 VKFRERDMAQAAIDALDGEVHLEGVDKPIRVKFADQNKGQYHHRSMSG 192
>gi|260788580|ref|XP_002589327.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
gi|229274504|gb|EEN45338.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
Length = 336
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 196/369 (53%), Gaps = 53/369 (14%)
Query: 86 SSPLQVK-------YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS 138
S P+Q+K A+GE E KLF+GM+ K +E++V +F+ YGTI++ +LR
Sbjct: 2 SHPIQMKPANNENRNANGECPVEERKLFVGMVSKKCNESDVRIMFAPYGTIEECTVLRDQ 61
Query: 139 QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
S+GCAF+ + T+ AL A++A++ MEG S PLVVK+ADT+K+++ +R Q+ +Q
Sbjct: 62 NGQSRGCAFVTFSTRASALNAIKALHQSQTMEGCSSPLVVKFADTQKDKEQKRLQQLNAQ 121
Query: 199 ANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPV 258
A + NA + AL Y S G G + P+
Sbjct: 122 AWSQMNALAS----LAALNPQYLALLAAATAANQASAG------------TGSSSAVNPL 165
Query: 259 NQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-AVPGLQYPMPYPGGMLGHRPLNNS 317
+ A + S +G +G G G P + GLQ G+ G LN +
Sbjct: 166 SSTGAGGNTNTSALSGLGAL------AGLQGLGTPNSTLGLQALT----GLSGMGSLNGT 215
Query: 318 PGSVSPAVANSNPSTSSSGGTGSG-----------GQIEGPPGANLFIYHIPQEFGDQEL 366
G+ + + S+SG G+G Q GP GANLFIYH+PQEFGDQ+L
Sbjct: 216 LGAAT--------ALSASGTAGNGVDPLSQAYSGIQQFAGPEGANLFIYHLPQEFGDQDL 267
Query: 367 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426
F FG V+SAKVF+DK T +SKCFGFVSY++P +AQ AI MNG Q+G K+LKVQLK
Sbjct: 268 MQTFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVAAQAAIQAMNGFQIGMKRLKVQLK 327
Query: 427 RDNKQNKPY 435
R NKPY
Sbjct: 328 RPKDANKPY 336
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EER KLFVG V K E+ + MF + ++E +++D+ + SRGC FV +R A
Sbjct: 24 EER-KLFVGMVSKKCNESDVRIMFAPYGTIEECTVLRDQNGQ-SRGCAFVTFSTRASALN 81
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ A H +T+ G SSPL VK+AD + ++ + +L
Sbjct: 82 AIKALHQSQTMEGCSSPLVVKFADTQKDKEQKRL 115
>gi|410921168|ref|XP_003974055.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 4 [Takifugu
rubripes]
Length = 471
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 218/431 (50%), Gaps = 41/431 (9%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q FG A P++ Y +S ++ LMQ + M G
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQQQAAIMAASHGG 297
Query: 252 H---GIIPPVNQGNAMRGASPDL--SSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPG 306
+ + P Q + M + + + M P + PP+ S P++ P
Sbjct: 298 YLTPSVAFPATQIHQMGALNINSLPPTPMTPVSGDSPPANITTSAVPSI-----VTPIVN 352
Query: 307 GMLG--HRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQ 364
G G H+P N P +V N P S+ T + + G + P
Sbjct: 353 GFTGIPHQP-NGHP-AVETMYTNGLPPYSTQSPTAADTLQQAFTGVQQYTAIYP------ 404
Query: 365 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 424
G+ L V + + GFVS+++PASAQ AI MNG Q+G K+LKVQ
Sbjct: 405 --ATTLTPIGQTLPQPPQVIQQQQQRE--GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQ 460
Query: 425 LKRDNKQNKPY 435
LKR ++PY
Sbjct: 461 LKRPKDASRPY 471
>gi|242013336|ref|XP_002427366.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212511730|gb|EEB14628.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 382
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 190/376 (50%), Gaps = 45/376 (11%)
Query: 89 LQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFL 148
L + Y + + KLF+GML K SE +V LF +G I++ ILRG + SKGCAF+
Sbjct: 23 LYLFYLIYNMIVTDRKLFVGMLSKQQSEEDVRQLFGPFGAIEECTILRGPEGASKGCAFV 82
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL-PNADS 207
K+ + ++A AA+ ++G M G+S LVVK+ADTEKERQ RR Q+ L P +
Sbjct: 83 KFSSHQEAQAAINNLHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAGNIGLLNPFVFN 142
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNA 263
Q + G S L N +G +P P +
Sbjct: 143 QFGAYGAYAQQAALMAAASQGTYISPMAALASQLPHTTLNGQHVNGAMPSLPSPTIPNFS 202
Query: 264 MRGASPD---------LSSNMGPRNY-------AMPPSGFVGS--------GYPAVPGLQ 299
M +P+ + SN P+ Y ++PP G G G P PG+
Sbjct: 203 MAAQTPNGQPGGTEPGVYSNGIPQTYPAYALHLSIPPQGLNGEAALQTAFPGMPPYPGVA 262
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQ 359
+P Y P ++ PA+A+ P+ G I GP G NLFIYH+PQ
Sbjct: 263 FPAVY----------GQFPQAIPPALASVPPTHR------EGCSISGPEGCNLFIYHLPQ 306
Query: 360 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 419
EFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K
Sbjct: 307 EFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMK 366
Query: 420 KLKVQLKRDNKQNKPY 435
+LKVQLKR N+PY
Sbjct: 367 RLKVQLKRPKDANRPY 382
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F F ++E I++ AS+GC FV S QEA A+N
Sbjct: 38 KLFVGMLSKQQSEEDVRQLFGPFGAIEECTILRGPEG-ASKGCAFVKFSSHQEAQAAINN 96
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+PGASS L VK+AD E ER
Sbjct: 97 LHGSQTMPGASSSLVVKFADTEKER 121
>gi|399217298|emb|CCF73985.1| unnamed protein product [Babesia microti strain RI]
Length = 432
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 221/443 (49%), Gaps = 84/443 (18%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV +VPK T+ L+ F F V+EV IIKDKTT A + C FV S +AD AV
Sbjct: 29 IKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADADSAVR 88
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
A HN K L + LQVKYA GE+ RL + KLFIG +PK ++E ++ +
Sbjct: 89 ALHNIKVLDASLGALQVKYAVGEVARLGLSNANSEPGVDQVKLFIGSVPKTITEEQIKKV 148
Query: 123 FSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F YG ++++ I++ S SKGCAF+K KEQ L A++ +GK ++ S PL V++A
Sbjct: 149 FGEYGQVEEVFIMKDLSTGLSKGCAFVKMSYKEQGLYAIKMADGKLTIDNSK-PLEVRFA 207
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY-------------NGYG 228
+ + ++Q N +P + + GA+ + P +G
Sbjct: 208 EAKGKQQ-----------NAIPGVPIPNIGV-GAMARPFQPGVPRQIGVWREYISPDGRP 255
Query: 229 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 288
Y S GL Q+ +PP + Q G P++ NAM + MPPS
Sbjct: 256 YYFSEQTGLTQWEVPP-EFQMG------PISTVNAM-------------GMHMMPPS--- 292
Query: 289 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 348
P+ ++ +NN ++ A+ N P+ + G G G GPP
Sbjct: 293 -------------TPFDQTVMH---MNN----ITNALYNKQPNATPCGSNGVGQ--FGPP 330
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
GANLFI+HIP ++ +L F FG ++SA++ DK TG ++ F FVSY + SA AI
Sbjct: 331 GANLFIFHIPYDWYYADLVKTFSQFGTIVSARIATDKGTGRNRGFAFVSYSTVESAVKAI 390
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQ 431
MNG + KKLKV +K+ +Q
Sbjct: 391 TCMNGFIIANKKLKVTVKKGEEQ 413
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLF+G VPK +TE Q+ +F E+ V+EV I+KD +T S+GC FV +++ A
Sbjct: 127 DQVKLFIGSVPKTITEEQIKKVFGEYGQVEEVFIMKDLSTGLSKGCAFVKMSYKEQGLYA 186
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+ K T+ S PL+V++A+ +
Sbjct: 187 IKMADGKLTIDN-SKPLEVRFAEAK 210
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
L KLF+ +PK+ ++ ++ F +G ++++ I++ + K CAF+K + A +A
Sbjct: 27 LSIKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADADSA 86
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
+ A++ ++ S L VK+A E R S AN+ P D Q G++P
Sbjct: 87 VRALHNIKVLDASLGALQVKYAVGEVARLGL------SNANSEPGVD-QVKLFIGSVP 137
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LF+ +P+ + D +L F FG+V + DK T K FV S A A +
Sbjct: 26 PLSIKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADADS 85
Query: 407 AIAMMNGCQL 416
A+ ++ ++
Sbjct: 86 AVRALHNIKV 95
>gi|332375404|gb|AEE62843.1| unknown [Dendroctonus ponderosae]
Length = 361
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 190/343 (55%), Gaps = 28/343 (8%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K E +V ALFS GTI++ +LR S+GCAF+ + K AL A++
Sbjct: 38 ERKLFVGMLSKKFCENDVRALFSGVGTIEECTVLRDPAGNSRGCAFVTFSNKHAALLAIK 97
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
+++ MEG S PLVVK+ADT+KE++ +R Q+ Q+ N P+L + P Y+
Sbjct: 98 SLHQSQTMEGCSAPLVVKFADTQKEKELKRHQQMQASVWN----ALATPTL-ASPPQQYS 152
Query: 222 P--PYNGYGYQ---ASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMG 276
P P Q A G L+Q + + N ++ P+ N + L++
Sbjct: 153 PVLPSEATSLQLLQAMGGSALLQQQF--LSNS---ENLLAPIGVQNLV-----TLAAMTQ 202
Query: 277 PRNYAMPP---SGFVGSGYPAVPGLQYPMPYPGGMLGHRP-LNNSPGSVSPAVANSNPST 332
P A P + +G G G++ + G G + L + S +N +
Sbjct: 203 PATAATAPLCMANLLGKG----AGVERTLTAAGLQAGLQSGLGTTTDLSSYGSLITNATL 258
Query: 333 SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 392
+++ +G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKC
Sbjct: 259 NAAAVAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGPVISAKVFIDKQTNLSKC 318
Query: 393 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
FGFVS+++ SAQ AIA MNG Q+G K+LKVQLKR + KPY
Sbjct: 319 FGFVSFDNANSAQQAIAAMNGFQIGTKRLKVQLKRAKEAAKPY 361
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K E + A+F ++E +++D SRGC FV ++ A A+ +
Sbjct: 40 KLFVGMLSKKFCENDVRALFSGVGTIEECTVLRDPAGN-SRGCAFVTFSNKHAALLAIKS 98
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+ G S+PL VK+AD + E+
Sbjct: 99 LHQSQTMEGCSAPLVVKFADTQKEK 123
>gi|426331471|ref|XP_004026704.1| PREDICTED: CUGBP Elav-like family member 3-like [Gorilla gorilla
gorilla]
Length = 348
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 182/356 (51%), Gaps = 19/356 (5%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF
Sbjct: 4 PIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 64 VKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIAL 123
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
Q FGA Y+ Q + L PM N +
Sbjct: 124 Q----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIAT 175
Query: 268 --SPDLSSNMGPRNYAMP----PSGFVGSGYPAVPGLQYPMPYPGGML--GHRPLNNSPG 319
+P ++ P A P P+ +GY VP P P + G P +
Sbjct: 176 PITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAAYP 235
Query: 320 SVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 379
+ VA P+ Q EGP G N+FIYH+PQEF D E+ F FG V+SA
Sbjct: 236 AAYSLVA---PAFPQPPALQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISA 292
Query: 380 KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 293 KVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 348
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 11 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 67
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 68 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 103
>gi|426386618|ref|XP_004059780.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Gorilla
gorilla gorilla]
Length = 370
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 199/389 (51%), Gaps = 63/389 (16%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCAF
Sbjct: 4 PIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 VKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL----- 118
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
PSL LP PY+ Y + LMQ + + + + P V
Sbjct: 119 -TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQ 164
Query: 268 SPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN 316
+S N P P SG G AVPGL P+ P+PGG H L
Sbjct: 165 IGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALET 221
Query: 317 --SPGSV-----SPAVANS-NPSTS----------SSGGTGSGGQI------------EG 346
+ G V SP VA + +P+ S ++ T + EG
Sbjct: 222 VYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREG 281
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 282 PEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQA 341
Query: 407 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR PY
Sbjct: 342 AIQAMNGFQIGMKRLKVQLKRPKDPGHPY 370
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 20 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 78
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 79 LHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|426230734|ref|XP_004009417.1| PREDICTED: CUGBP Elav-like family member 5 [Ovis aries]
Length = 579
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 214/428 (50%), Gaps = 69/428 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 68 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 127
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE-RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 128 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 187
Query: 132 LQILRGSQQTS-----KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
+LRG ++ GCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KE
Sbjct: 188 CTVLRGPRRARWGGWGAGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKE 247
Query: 187 RQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
R RR Q+ Q L PSL LP PY+ Y + LMQ + +
Sbjct: 248 RTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLS 290
Query: 247 NQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM- 302
+ + P V +S N P P SG G AVPGL P+
Sbjct: 291 TSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTAAVPGLVAPIT 348
Query: 303 -------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS----------SSGG 337
P+PG GH L + G V SP VA + +P+ S ++
Sbjct: 349 NGFAGVVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI 405
Query: 338 TGSGGQI------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 385
T + EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+
Sbjct: 406 TPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDR 465
Query: 386 ATGVSKCF 393
AT SKCF
Sbjct: 466 ATNQSKCF 473
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETK 153
DG + KLF+G +P+N+ E ++ LF +G I +L +L+ KGCAFL Y +
Sbjct: 62 DGTKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCAR 121
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ A+ A A++ + + G + P+ VK AD+E
Sbjct: 122 DSAIKAQTALHEQKTLPGMARPIQVKPADSE 152
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 313 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNA 369
PL + P V +A +P SSG GGQ +G + LF+ IP+ +++L
Sbjct: 32 PLRSRPFVVL-MLARPSP-VGSSGPEPPGGQPDGTKDLDAIKLFVGQIPRNLDEKDLKPL 89
Query: 370 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRD 428
F+ FGR+ V D TG+ K F++Y + SA A A+ L G +Q+K
Sbjct: 90 FEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPA 149
Query: 429 NKQNK 433
+ +++
Sbjct: 150 DSESR 154
>gi|348549848|ref|XP_003460745.1| PREDICTED: CUGBP Elav-like family member 5-like [Cavia porcellus]
Length = 424
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 195/400 (48%), Gaps = 74/400 (18%)
Query: 83 PGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT 141
P + P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +
Sbjct: 52 PQMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGS 111
Query: 142 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANN 201
SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 112 SKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGI 171
Query: 202 LPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSY---------------- 235
L PSL ALP PY+ Y SGSY
Sbjct: 172 L------TPSL--ALPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIG 220
Query: 236 -----GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGASPDLSSNM--G 276
GL + PP+ G++ P+ G A G P L + G
Sbjct: 221 AVSLNGLPATPVAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGHPALETVYANG 280
Query: 277 PRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSS 335
Y + +PA G+Q Y YP + P+ +S P +
Sbjct: 281 LVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHSVPQPPPLLQQR------- 331
Query: 336 GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 395
Q EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGF
Sbjct: 332 -------QREGPEGCNLFIYHLPQEFGDMELTQMFLPFGNIISSKVFMDRATNQSKCFGF 384
Query: 396 VSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
VS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 385 VSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDLGHPY 424
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 63 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 120
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 121 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 162
>gi|345478760|ref|XP_001605205.2| PREDICTED: CUGBP Elav-like family member 4-like [Nasonia
vitripennis]
Length = 382
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 201/392 (51%), Gaps = 57/392 (14%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K +E +V LF+ +GTI++ ILRG TS+GCAF
Sbjct: 4 PIQVKPADSE-NRGDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGTSRGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ T ++A +A+ +++G M G+S LVVK+ADTEKERQ RR Q+ N
Sbjct: 63 IKFSTHQEAQSAINSLHGSQTMPGASSSLVVKYADTEKERQLRRMQQMAG------NMSL 116
Query: 208 QHPSLFGAL-PMGYAPPYNG------------YGYQASGSYGLMQYRLPPMQNQPGFHGI 254
+P +F P G G A+ + G + + L M N +
Sbjct: 117 INPFVFNQFGPYGAYAQQQAALMAAATAQGTYIGPMAALAAGQLPHALNGMPNT-----V 171
Query: 255 IPPVN---QGNAMRGASPDLSSNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGM 308
+PP + G + GA P L S P N+ M P+G P+V P Y G
Sbjct: 172 VPPTSGTGTGQPVNGALPSLPSPTMP-NFNMAAQTPNGQPAGTDPSVYTNGIPQTYAGHA 230
Query: 309 L-------------------GHRPLNNSPGSVSPAV------ANSNPSTSSSGGTGSGGQ 343
L G+ + G PAV A P T+ + G
Sbjct: 231 LHLSIPAQGLPNGEAALQHAGYPGMQAYHGVAYPAVYGQFPQAIPQPMTTVAPQQREGCS 290
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 291 ISGPEGCNLFIYHLPQEFGDAELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNQQC 350
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 351 AQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 382
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K TE + +F F ++E I++ D T SRGC F+ + QEA A+
Sbjct: 19 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGT---SRGCAFIKFSTHQEAQSAI 75
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLEHKL 105
N+ H +T+PGASS L VKYAD E ER ++
Sbjct: 76 NSLHGSQTMPGASSSLVVKYADTEKERQLRRM 107
>gi|383851701|ref|XP_003701370.1| PREDICTED: CUGBP Elav-like family member 4-like [Megachile
rotundata]
Length = 402
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 189/391 (48%), Gaps = 81/391 (20%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+
Sbjct: 36 DRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAIN 95
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL------------------- 202
+++G M G+S +VVK+ADTEKERQ RR Q+ + L
Sbjct: 96 SLHGSQTMPGASSSVVVKFADTEKERQVRRMQQMAGNMSILNPFVFNQFGAYGAYAQQQA 155
Query: 203 -----------------PNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
A Q P +P PP +G G + + P M
Sbjct: 156 ALMAAATAQGTYINPMAALAAGQLPHALNGMPNPIVPPTSGTGTGQPVNGAIPSLPSPTM 215
Query: 246 QN---------------QPG-FHGIIPPVNQGNAMRGASP--DLSSNMGPRNYAMPPSG- 286
N PG + IP G+A+ + P L++ +A SG
Sbjct: 216 PNFNMAAQTPNGQPTGSDPGVYTNGIPQTYAGHALHLSIPAQGLANGDAAIQHAAAYSGI 275
Query: 287 --FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQI 344
F G YPAV G Q+P P P T+ + G I
Sbjct: 276 QPFAGVAYPAVYG-QFPQAIP-----------------------QPMTAVAPTQREGCSI 311
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
GP G NLFIYH+PQ+FGD +L F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 312 SGPEGCNLFIYHLPQDFGDSDLMQMFVPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 371
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 372 HAAIQAMNGFQIGMKRLKVQLKRPKDTNRPY 402
>gi|403276016|ref|XP_003929713.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 150/367 (40%), Positives = 194/367 (52%), Gaps = 45/367 (12%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGQLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y + + Q L PG G + V A
Sbjct: 119 -HPA---PLPLGACSAY-------TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAA 166
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG +PGL P P G+ G PL N PGS
Sbjct: 167 FSLVAAPLLPAAANSPP----GSGPGTLPGL----PAPIGINGFGPLTPQTNGQPGSDTL 218
Query: 321 ----VSPAVANSNPSTSSSGGTGSGGQ--------IEGPPGANLFIYHIPQEFGDQELGN 368
+SP A + PS + T Q EGP G NLFIYH+PQEFGD EL
Sbjct: 219 YNNGLSPYPA-AYPSAYAPVSTAFAQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQ 277
Query: 369 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 278 TFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRP 337
Query: 429 NKQNKPY 435
N+PY
Sbjct: 338 KDANRPY 344
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|431922279|gb|ELK19370.1| CUG-BP- and ETR-3-like factor 5 [Pteropus alecto]
Length = 377
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 186/353 (52%), Gaps = 47/353 (13%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 53 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 112
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP
Sbjct: 113 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS-- 162
Query: 222 PPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA 281
PY+ Y + LMQ + + + + P V +S N P
Sbjct: 163 -PYSAY------AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPI 213
Query: 282 MPPSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SP 323
P SG AVPGL P+ P+PGG H L + G V SP
Sbjct: 214 APASGLHSPPLLSTAAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSP 270
Query: 324 AVANS-NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
VA + +P+ S Q GP G NLFIYH+PQEFGD EL F FG ++S+KVF
Sbjct: 271 TVAETLHPAFSGVQ------QYTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVF 324
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 325 MDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPRDPGHPY 377
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 55 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 113
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 114 LHGSQTMPGASSSLVVKFADTDKERTLRRM 143
>gi|390478372|ref|XP_002761622.2| PREDICTED: CUGBP Elav-like family member 5 [Callithrix jacchus]
Length = 383
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 192/391 (49%), Gaps = 65/391 (16%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 15 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 74
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 75 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL---- 130
Query: 207 SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRG 266
PSL LP PY+ Y + LMQ + + + + P V
Sbjct: 131 --TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQ 175
Query: 267 ASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHRPLN 315
+S N P P SG G AVPGL P+ P+PGG H L
Sbjct: 176 QIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALE 232
Query: 316 N--SPGSV-----SPAVANSNP------------------------STSSSGGTGSGGQI 344
+ G V SP VA S Q
Sbjct: 233 TVYANGLVPYPAQSPTVARDTDILPSPRVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQR 292
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 293 EGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASA 352
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR PY
Sbjct: 353 QTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 383
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 21 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 78
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 79 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 120
>gi|332844222|ref|XP_003314797.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Pan
troglodytes]
Length = 345
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 192/367 (52%), Gaps = 44/367 (11%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGHLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y Q G +++ + G + V A
Sbjct: 119 -HPA---PLPLGACGAYTTAILQHQGGLAGSRHKAQDL-------GPVGAVAAQMQHVAA 167
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG +PGL P P G+ G PL N PGS
Sbjct: 168 FSLVAAPLLPAAANSPP----GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTL 219
Query: 321 ----VSPAVANSNPSTSSSGGTG--------SGGQIEGPPGANLFIYHIPQEFGDQELGN 368
+SP A + PS + T Q EGP G NLFIYH+PQEFGD EL
Sbjct: 220 YNNGLSPYPA-AYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQ 278
Query: 369 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 279 TFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRP 338
Query: 429 NKQNKPY 435
N+PY
Sbjct: 339 KDANRPY 345
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|334326938|ref|XP_001363664.2| PREDICTED: CUGBP Elav-like family member 5-like [Monodelphis
domestica]
Length = 545
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 200/391 (51%), Gaps = 64/391 (16%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG SKGCA
Sbjct: 176 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGNSKGCA 235
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 236 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIF---- 291
Query: 207 SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRG 266
PSL LP PY+ Y + LMQ + + G + + P V
Sbjct: 292 --TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSHGSY-LSPGVAFSPCHIQ 337
Query: 267 ASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHRPLN 315
+S N P P SG G AVPGL P+ P+PGG H L
Sbjct: 338 QIGAVSLNGIPATPIAPASGLHSPPLLGTAAVPGLVTPITNGFAGVVPFPGG---HPALE 394
Query: 316 N--SPGSV-----SPAVANS-NPSTS----------SSGGTGSGGQI------------- 344
+ G V SP++A + +P+ S ++ T +
Sbjct: 395 TVYANGLVPYPAQSPSMAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPIIQQQQQR 454
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++P+SA
Sbjct: 455 EGPEGCNLFIYHLPQEFGDSELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSA 514
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR + PY
Sbjct: 515 QTAIQAMNGFQIGMKRLKVQLKRPKDASHPY 545
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 182 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGN-SKGCAFVKF 239
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 240 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 281
>gi|449491676|ref|XP_002192940.2| PREDICTED: LOW QUALITY PROTEIN: bruno-like 5, RNA binding protein
[Taeniopygia guttata]
Length = 370
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 197/391 (50%), Gaps = 67/391 (17%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG SKGCAF
Sbjct: 4 PIQVKPADSESRGGDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 64 VKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIF----- 118
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
PSL +LP PY+ Y + LMQ + + G + + P V
Sbjct: 119 -TPSL--SLPFS---PYSAY------AQALMQQQTTVLSTSHGSY-LSPGVAFSPCHIQQ 165
Query: 268 SPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN 316
+S N P P SG G A+PGL P+ P+P GH L
Sbjct: 166 IGAVSLNGLPATPIAPASGLHSPPLLGTAAMPGLVAPISNGFTGVVPFPN---GHPTLET 222
Query: 317 --SPGSV-----SPAVANS-NPSTSSSGGTGSGGQIEGPP-------------------- 348
+ G V SP+VA + +P+ + G + PP
Sbjct: 223 VYTNGLVPYSAQSPSVAETLHPAFT---GVQQYAAVYPPPHHPIAQSIPQQPPILQQQQR 279
Query: 349 ----GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++P+SA
Sbjct: 280 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSA 339
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N PY
Sbjct: 340 QTAIQAMNGFQIGMKRLKVQLKRPKDANHPY 370
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ S+GC FV S EA A++A
Sbjct: 20 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 78
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 79 LHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|340725302|ref|XP_003401011.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 4 [Bombus
terrestris]
Length = 360
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 191/369 (51%), Gaps = 51/369 (13%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G
Sbjct: 1 MLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
M G+S LVVK+ADTEKERQ RR Q+ A N+ + + FGA
Sbjct: 61 MPGASSSLVVKFADTEKERQLRRMQQ---MAGNMSLLNPFVFNQFGAYGAYAQQAALMAA 117
Query: 229 YQASGSY----------GLMQYRLPPMQNQPGFHGIIPPVN---QGNAMRGASPDLSSNM 275
A G+Y G + + L M N ++PP + G + GA P L S
Sbjct: 118 ATAQGTYINPMAALVGAGQLPHALNGMPNP-----VVPPTSGTGTGQPVNGAIPSLPSPT 172
Query: 276 GPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS---- 317
P N+ M P+G P V P YPG L G L ++
Sbjct: 173 MP-NFNMAAQTPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNGEAALQHAAAYP 231
Query: 318 -----PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQEL 366
PG PAV A P T+ + G I GP G NLFIYH+PQEFGD EL
Sbjct: 232 GMQPYPGVAYPAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGEL 291
Query: 367 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426
F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLK
Sbjct: 292 MQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLK 351
Query: 427 RDNKQNKPY 435
R ++PY
Sbjct: 352 RPKDASRPY 360
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TE + +F F ++E I++ +SRGC FV S QEA A+N H +T+P
Sbjct: 4 KQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINTLHGSQTMP 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK+AD E ER ++
Sbjct: 63 GASSSLVVKFADTEKERQLRRM 84
>gi|332236066|ref|XP_003267226.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Nomascus
leucogenys]
Length = 344
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 193/367 (52%), Gaps = 45/367 (12%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGHLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y + + Q L PG G + V A
Sbjct: 119 -HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAA 166
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG A+PGL P P G+ G PL N PGS
Sbjct: 167 FSLVAAPLLPAAANSPP----GSGPGALPGL----PAPIGVNGFGPLTPQTNGQPGSDTL 218
Query: 321 ----VSPAVANSNPSTSSSGGTG--------SGGQIEGPPGANLFIYHIPQEFGDQELGN 368
+SP A + PS + T Q EGP G NLFIYH+PQEFGD EL
Sbjct: 219 YNNGLSPYPA-AYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQ 277
Query: 369 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 278 TFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRP 337
Query: 429 NKQNKPY 435
N+PY
Sbjct: 338 KDANRPY 344
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|218196668|gb|EEC79095.1| hypothetical protein OsI_19720 [Oryza sativa Indica Group]
Length = 338
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 119/154 (77%), Gaps = 4/154 (2%)
Query: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 203
GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+
Sbjct: 178 GCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMS 237
Query: 204 NADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGN 262
N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+
Sbjct: 238 NPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGS 297
Query: 263 AMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
++RG + +LS N PR++ S +GS Y VP
Sbjct: 298 SIRGVNSELSPNSAPRSFN---STQLGSPYSPVP 328
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 39 ALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGEL 98
AL+ V + ++T GC F+ ++++A A+ A + K + G+S PL VK+AD E
Sbjct: 165 ALLGTVTVHAEET-----GCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEK 219
Query: 99 ERLEHKLFIGML-PKNVSEAEVSALFSIYGTIK 130
ER K P N+S S++G ++
Sbjct: 220 ERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQ 252
>gi|401409201|ref|XP_003884049.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
gi|325118466|emb|CBZ54017.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
Length = 678
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 200/445 (44%), Gaps = 77/445 (17%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
+KLFVG+VP+ + E L +F+ F V EV +I+DK T + FV S AD +
Sbjct: 129 EIKLFVGRVPQTVDEDALRPIFEGFGDVREVFVIRDKNTLKHKNSAFVKMASLAAADACI 188
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAE 118
A H+ + L A P+ VKYA GE ERL + KLF+G +P+ +SE E
Sbjct: 189 RALHSNRILDAALGPIIVKYATGEAERLGMHSLGMGGEGGGVDQAKLFVGSIPRTMSEDE 248
Query: 119 VSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
+ F YGT++++ +++ S T KGCAF+K++ KE+ L A+ +NGKH EG + P+
Sbjct: 249 LRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHIFEGCTRPVE 308
Query: 178 VKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
V++A E +++R Q+ Q N +
Sbjct: 309 VRFA----ESKSQRQQQMAGQHNLGGLGGWGGGGVM------------------------ 340
Query: 238 MQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPG 297
Q G G+ R AS SN PR F G P
Sbjct: 341 ---------TQAGLSGM---------SRSASTLAGSNANPRQAGQWKEYFAPDGRP---- 378
Query: 298 LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG----------SGGQIEGP 347
Y Y RP ++ N ++ SGG G G + GP
Sbjct: 379 -YYHNEYTNVTTWERPPEFDHLPLASLALGGNQASMFSGGVGLHHGSVNSGIGGSETAGP 437
Query: 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 407
PGAN+F++HIP E+ +L F FG ++S + VDK + ++ F FVSY++ SA NA
Sbjct: 438 PGANVFVFHIPNEWTKADLIQTFSGFGNIVSCHIAVDKVSHRNRGFAFVSYDNVQSAANA 497
Query: 408 IAMMNGCQLGGKKLKVQLKRDNKQN 432
+ MNGC K+L V +K+ + +
Sbjct: 498 VNHMNGCLAANKRLNVSIKKGEEHH 522
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++ KLFVG +P+ M+E +L F+ + V+EV ++KD T +GC FV ++E A
Sbjct: 231 DQAKLFVGSIPRTMSEDELRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHA 290
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER 100
+ + K G + P++V++A+ + +R
Sbjct: 291 MRNLNGKHIFEGCTRPVEVRFAESKSQR 318
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV +P T+A L+ F F + +I DK + +RG FV + Q A AVN
Sbjct: 442 VFVFHIPNEWTKADLIQTFSGFGNIVSCHIAVDKVSHRNRGFAFVSYDNVQSAANAVN-- 499
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKLFI 107
H L A+ L V GE ++H L +
Sbjct: 500 HMNGCL-AANKRLNVSIKKGEEHHVQHLLNV 529
>gi|386769533|ref|NP_001246001.1| bruno-2, isoform I [Drosophila melanogaster]
gi|383291459|gb|AFH03675.1| bruno-2, isoform I [Drosophila melanogaster]
Length = 350
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 191/362 (52%), Gaps = 47/362 (12%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNAMRGASPDLSSNMGPRNY 280
G + + S +P +Q Q G P P+N A+ S L+ N+ N
Sbjct: 121 AG---RTNPSMAAALAAVPQVQ-QAGSAATAPTTLVPLNSTTAL---SASLTPNLLATNA 173
Query: 281 AMPPSGFVGS-------------------GYPAVPGLQYP------MPYPGGMLGHRPLN 315
A + + GY P P PY + G L
Sbjct: 174 AHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGPPNAADPYSSSLSG---LT 230
Query: 316 NSP--GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAF 373
N G+ S V S +++G TG QIEGP G+NLFIYH+PQEF D +L + F F
Sbjct: 231 NGAAYGAASQPVTTSALQAAAAGVTGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPF 288
Query: 374 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
G VLSAKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR K
Sbjct: 289 GNVLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAK 348
Query: 434 PY 435
PY
Sbjct: 349 PY 350
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|156101369|ref|XP_001616378.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148805252|gb|EDL46651.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 513
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 205/430 (47%), Gaps = 89/430 (20%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK M E QL +F+EF +V EV II+DK T + FV S EAD A+
Sbjct: 88 IKLFIGRVPKTMEEEQLRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIR 147
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPK+++E V +F
Sbjct: 148 SLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSITEESVKEMF 207
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 208 SPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 267
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
+ +Q + +PM L
Sbjct: 268 PKSAKQTQ-------------------------IPM----------------------TL 280
Query: 243 PPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-----AVPG 297
PMQN P V N + +N PR + G G P
Sbjct: 281 QPMQNAAHGMNSQPHVTSPNNINFGQNFGVNNNYPRQVGAWKEYYSGEGRPYYYNEQTNT 340
Query: 298 LQYPMP--YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIY 355
Q+ MP + +G P N + + SSG G+ NLFI+
Sbjct: 341 TQWEMPKEFETLFMGSTP-------------NMHNLSDSSGPPGA----------NLFIF 377
Query: 356 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 415
H+P E+ +L AF FG +LSA++ +K+TG ++ F FVSYES SA AI+ MNG
Sbjct: 378 HVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAAAISQMNGFM 437
Query: 416 LGGKKLKVQL 425
KKLKV +
Sbjct: 438 ALNKKLKVTV 447
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK +TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 181 ESGVDQAKLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 240
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+N+ + KKTL G + P++V++A+
Sbjct: 241 ALYAINSLNGKKTLEGCARPVEVRFAE 267
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LFI +P+ +++L F+ FG V + DK T + K FV S + A N
Sbjct: 85 PVSIKLFIGRVPKTMEEEQLRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADN 144
Query: 407 AIAMMNGC-----QLGGKKLK 422
AI +N QLG ++K
Sbjct: 145 AIRSLNNQRTLDPQLGSLQVK 165
>gi|221307768|gb|ACM16743.1| MIP02242p [Drosophila melanogaster]
Length = 350
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 191/362 (52%), Gaps = 47/362 (12%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNAMRGASPDLSSNMGPRNY 280
G + + S +P +Q Q G P P+N A+ S L+ N+ N
Sbjct: 121 AG---RTNPSMAAALAAVPQVQ-QAGSAATAPTTLVPLNSTTAL---SASLTPNLLATNA 173
Query: 281 AMPPSGFVGS-------------------GYPAVPGLQYP------MPYPGGMLGHRPLN 315
A + + GY P P PY + G L
Sbjct: 174 AHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGPPNAADPYSSSLSG---LT 230
Query: 316 NSP--GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAF 373
N G+ S V S +++G TG QIEGP G+NLFIYH+PQEF D +L + F F
Sbjct: 231 NGAAYGAASQPVTTSALQAAAAGVTGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPF 288
Query: 374 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
G VLSAKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR K
Sbjct: 289 GNVLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAVK 348
Query: 434 PY 435
PY
Sbjct: 349 PY 350
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|426379621|ref|XP_004056490.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Gorilla
gorilla gorilla]
Length = 344
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 150/367 (40%), Positives = 195/367 (53%), Gaps = 45/367 (12%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q A +L +
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRM---QQMAGHL---GA 117
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y + + Q L PG G + V A
Sbjct: 118 FHPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAA 166
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG +PGL P P G+ G PL N PGS
Sbjct: 167 FSLVAAPLLPAAANSPP----GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTL 218
Query: 321 ----VSPAVANSNPSTSSSGGTG--------SGGQIEGPPGANLFIYHIPQEFGDQELGN 368
+SP A + PS + T Q EGP G NLFIYH+PQEFGD EL
Sbjct: 219 YNNGLSPYPA-AYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQ 277
Query: 369 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 278 TFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRP 337
Query: 429 NKQNKPY 435
N+PY
Sbjct: 338 KDANRPY 344
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|289547743|ref|NP_001166156.1| CUGBP Elav-like family member 6 isoform 3 [Homo sapiens]
gi|194377382|dbj|BAG57639.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 150/367 (40%), Positives = 194/367 (52%), Gaps = 45/367 (12%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA+ ++G M G+S LVVK ADT++ER RR Q A +L +
Sbjct: 64 VKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALRRM---QQMAGHL---GA 117
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y + + Q L PG G + V A
Sbjct: 118 FHPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAA 166
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG +PGL P P G+ G PL N PGS
Sbjct: 167 FSLVAAPLLPAAANSPP----GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTL 218
Query: 321 ----VSPAVANSNPSTSSSGGTG--------SGGQIEGPPGANLFIYHIPQEFGDQELGN 368
+SP A + PS + T Q EGP G NLFIYH+PQEFGD EL
Sbjct: 219 YNNGLSPYPA-AYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQ 277
Query: 369 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 278 TFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRP 337
Query: 429 NKQNKPY 435
N+PY
Sbjct: 338 KDANRPY 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IRGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|397496989|ref|XP_003819302.1| PREDICTED: CUGBP Elav-like family member 5 [Pan paniscus]
Length = 433
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 191/375 (50%), Gaps = 63/375 (16%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 81 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 140
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP
Sbjct: 141 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS-- 190
Query: 222 PPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA 281
PY+ Y + LMQ + + + + P V +S N P
Sbjct: 191 -PYSAY------AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPI 241
Query: 282 MPPSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SP 323
P SG G AVPGL P+ P+PGG H L + G V SP
Sbjct: 242 APASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSP 298
Query: 324 AVANS-NPSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQE 360
VA + +P+ S ++ T + EGP G NLFIYH+PQE
Sbjct: 299 TVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQE 358
Query: 361 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 420
FGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+
Sbjct: 359 FGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKR 418
Query: 421 LKVQLKRDNKQNKPY 435
LKVQLKR PY
Sbjct: 419 LKVQLKRPKDPGHPY 433
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 83 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 141
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 142 LHGSQTMPGASSSLVVKFADTDKERTLRRM 171
>gi|359067200|ref|XP_003586320.1| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 685
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 190/375 (50%), Gaps = 63/375 (16%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 333 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 392
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP
Sbjct: 393 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS-- 442
Query: 222 PPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA 281
PY+ Y + LMQ + + + + P V +S N P
Sbjct: 443 -PYSAY------AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPI 493
Query: 282 MPPSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SP 323
P SG G VPGL P+ P+PGG H L + G V SP
Sbjct: 494 APASGLHSPPLLGTATVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSP 550
Query: 324 AVANS-NPSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQE 360
VA + +P+ S ++ T + EGP G NLFIYH+PQE
Sbjct: 551 TVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQE 610
Query: 361 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 420
FGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+
Sbjct: 611 FGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKR 670
Query: 421 LKVQLKRDNKQNKPY 435
LKVQLKR PY
Sbjct: 671 LKVQLKRPKDPGHPY 685
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 335 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 393
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 394 LHGSQTMPGASSSLVVKFADTDKERTLRRM 423
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 50 KTTRASR-GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA-----------DGE 97
+ R R GC F+ +R A KA A H +KTLPG P DG
Sbjct: 106 RAIRGHRIGCAFLTYCARDSAIKAQTALHEQKTLPGLLQPRPSPVGSSGPEPPGGQPDGT 165
Query: 98 LERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+ KLF+G +P+N+ E ++ LF +G I +L +L+
Sbjct: 166 KDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLK 204
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGC 58
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T + C
Sbjct: 169 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKDC 214
>gi|157138640|ref|XP_001664292.1| hypothetical protein AaeL_AAEL014033 [Aedes aegypti]
gi|108869466|gb|EAT33691.1| AAEL014033-PA, partial [Aedes aegypti]
Length = 351
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/373 (38%), Positives = 192/373 (51%), Gaps = 64/373 (17%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+GML K +E +V LF+ +GTI++ ILRG SKGCAF+K+ + ++A AA+ +
Sbjct: 2 KLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDGASKGCAFVKFTSHQEAQAAITTL 61
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPP 223
+G M G+S LVVK+ADTEKE R+ ++ Q A H +L P
Sbjct: 62 HGSQTMPGASSSLVVKFADTEKE---RQLRRMQQMAG--------HMNLLSPFVFNQFGP 110
Query: 224 YNGYGYQAS----------GSY----GLMQYRLPPMQNQPG--FHGIIP----PVNQGNA 263
Y Y Q G+Y + ++P N G +G IP P
Sbjct: 111 YGAYAQQQQAALMAAATAQGTYINPMAALATQIPHALNGSGQPVNGTIPSLPSPTMPTFN 170
Query: 264 MRGASPD--------LSSNMGPRNY-------AMPPSGFVGSGYPAVPGLQYPMPYPGGM 308
M +P+ + +N P+ Y ++P G + +G A+P YP
Sbjct: 171 MAAQTPNGQPAGSEAVYTNGIPQTYPGHALHLSIPAQG-LPNGDAALPHAAYP------- 222
Query: 309 LGHRPLNNSPGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFG 362
G +P PG PAV A P + + G I GP G NLFIYH+PQEFG
Sbjct: 223 -GIQPY---PGVAYPAVYGQFPQAIPQPIATIAPAQREGCSISGPEGCNLFIYHLPQEFG 278
Query: 363 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 422
D EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LK
Sbjct: 279 DGELMQMFMPFGTVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLK 338
Query: 423 VQLKRDNKQNKPY 435
VQLKR N+PY
Sbjct: 339 VQLKRPKDANRPY 351
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ AS+GC FV S QEA A+
Sbjct: 2 KLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDG-ASKGCAFVKFTSHQEAQAAITT 60
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 61 LHGSQTMPGASSSLVVKFADTEKERQLRRM 90
>gi|74220804|dbj|BAE31371.1| unnamed protein product [Mus musculus]
Length = 440
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 225/447 (50%), Gaps = 44/447 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 194 QRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAFS--GIQ 246
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 247 QMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPV-AASTPNSTAG 305
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 349
+ ++ L G +G +N G++ N + +GG G+ G G G
Sbjct: 306 AAMNSLTSLGTLQGLAGATVGLNNINALAGTI-------NSMAALNGGLGATGLTNGTAG 358
Query: 350 ANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
+ + Q + G Q+ A A + S + ++ S+ GFVSY++P SAQ AI
Sbjct: 359 T---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAI 413
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR +KPY
Sbjct: 414 QAMNGFQIGMKRLKVQLKRSKNDSKPY 440
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|146197847|dbj|BAF57635.1| bruno-like protein [Dugesia japonica]
Length = 402
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 185/383 (48%), Gaps = 49/383 (12%)
Query: 84 GASSPLQVKYADGELERL----------------EHKLFIGMLPKNVSEAEVSALFSIYG 127
G PLQVK A L + E KLF+GML KN ++ V +F+ +G
Sbjct: 2 GTRRPLQVKPAKNNLTKKTNMNTLNQLGENIASDERKLFVGMLSKNQTDENVQNMFTKFG 61
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I++ +L+ SKGCAF+K+ A AA+ A++ KMEG+S LVVK+ADT+K++
Sbjct: 62 KIEECTVLKDQNGNSKGCAFVKFLNHTDARAAINALHASQKMEGASSSLVVKFADTDKQK 121
Query: 188 QARRAQKAQSQAN--------NLPNADSQ-----HPSLFGALPMG-YAPPYNGYGYQASG 233
Q R+ Q+ N ++P SQ +P + A+P + P N Y A
Sbjct: 122 QIRKLQQNLPDLNILNSHIPIHIPYYTSQCGPVINPEMNSAIPTTQFIPNCNEYILAAQI 181
Query: 234 SYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASP------DLSSNMGPRNYAMPPSGF 287
+ +PP I P N +M P + N P+ M
Sbjct: 182 QQINLFSNIPP----------IYPSNSIVSMPSTHPVPMIDYSIPINNLPKTDQMTMKPV 231
Query: 288 VGSGYPAVPGLQYPMPYPGGMLGHRPLN-NSPGSVSPAVANSNPST--SSSGGTGSGGQI 344
+ L P+ PG + + LN P A N+N S+ +S S
Sbjct: 232 LDVQQITQDNLNRPIVTPGSFMSYPFLNVQIPTGYQAAFPNNNLSSINQNSNDVKSTPLP 291
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
GP G NLFIYH+PQE GD +L F FG V+S+KV+VD+AT SKCFGFVSY+ PA A
Sbjct: 292 TGPEGCNLFIYHLPQEIGDLQLYQIFMHFGNVISSKVYVDRATNQSKCFGFVSYDDPACA 351
Query: 405 QNAIAMMNGCQLGGKKLKVQLKR 427
AI MNG +G K+LKVQLK+
Sbjct: 352 NAAIKSMNGYHIGTKRLKVQLKK 374
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E +S+ER KLFVG + K+ T+ + MF +F ++E ++KD+ S+GC FV +
Sbjct: 30 ENIASDER-KLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGN-SKGCAFVKFLNH 87
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+NA H + + GASS L VK+AD + ++ KL
Sbjct: 88 TDARAAINALHASQKMEGASSSLVVKFADTDKQKQIRKL 126
>gi|327291733|ref|XP_003230575.1| PREDICTED: CUGBP Elav-like family member 5-like, partial [Anolis
carolinensis]
Length = 365
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 182/373 (48%), Gaps = 47/373 (12%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE ++ LF +G I + +LRG SKGCAF+K+ + +A AA+
Sbjct: 1 DRKLFVGMLNKQQSEEDILRLFEPFGAIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIH 60
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP--------------NADS 207
A++G M G+S LVVK+ADT+KER RR Q+ Q L A
Sbjct: 61 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSFALPFSPYGAYAQALM 120
Query: 208 QHPSLFGALPMGYAPPYNGYG---YQASGSYGLMQYRLPPMQNQPGFH-----------G 253
Q ++ A + P + Q G+ L P+ G H G
Sbjct: 121 QQQTVLSASHGNFVSPTLTFSPCHIQQIGTVSLNSLPSSPITQTSGLHSPSLLGSTAVPG 180
Query: 254 IIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSG----------YPAVPGLQ-YPM 302
++ P+ N+ G P + S+ P A+ +G V +PA G+Q Y
Sbjct: 181 LVAPI--ANSFAGVVP-IPSSHHPSLEAVYANGLVPCAAQNPSVGEALHPAFTGVQQYAA 237
Query: 303 PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFG 362
YP + P+ + P + EGP G NLFIYH+PQEFG
Sbjct: 238 VYPATAI--TPVAQAIPQPLPIIQQQQQQQQQPQQQQQR---EGPEGCNLFIYHLPQEFG 292
Query: 363 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 422
D EL F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LK
Sbjct: 293 DNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLK 352
Query: 423 VQLKRDNKQNKPY 435
VQLKR PY
Sbjct: 353 VQLKRPKDAGHPY 365
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F +DE +++ S+GC FV S EA A++A
Sbjct: 3 KLFVGMLNKQQSEEDILRLFEPFGAIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 61
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 62 LHGSQTMPGASSSLVVKFADTDKERTLRRM 91
>gi|226503733|ref|NP_001142011.1| uncharacterized protein LOC100274164 [Zea mays]
gi|194706784|gb|ACF87476.1| unknown [Zea mays]
Length = 212
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 138/193 (71%), Gaps = 6/193 (3%)
Query: 204 NADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR-LPPMQNQPGFHGIIPPVNQG 261
NA++ Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QNQ F ++ PVNQG
Sbjct: 3 NANAMQQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQNQAAFQNMVQPVNQG 62
Query: 262 NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSV 321
+++ GA+ ++S N PR++ S +GS Y +PGLQYP YPGG + HRP ++S S
Sbjct: 63 SSIHGANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGGPINHRPFSSSHSST 119
Query: 322 SPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 381
+S S SSS + G QIEGPPGANLFIYHIPQEFGD +L +AF +FGRVLSAKV
Sbjct: 120 K-VQNSSANSPSSSPSSNPGPQIEGPPGANLFIYHIPQEFGDHDLASAFHSFGRVLSAKV 178
Query: 382 FVDKATGVSKCFG 394
FVDKATGVSKCFG
Sbjct: 179 FVDKATGVSKCFG 191
>gi|294884853|gb|ADF47437.1| Bruno 5-like protein [Dugesia japonica]
Length = 381
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 176/349 (50%), Gaps = 33/349 (9%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML KN ++ V +F+ +G I++ +L+ SKGCAF+K+ A AA+
Sbjct: 15 ERKLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGNSKGCAFVKFLNHTDARAAIN 74
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN--------NLPNADSQ----- 208
A++ KMEG+S LVVK+ADT+K++Q R+ Q+ N ++P SQ
Sbjct: 75 ALHASQKMEGASSSLVVKFADTDKQKQIRKLQQNLPDLNILNSHIPIHIPYYTSQCGPVI 134
Query: 209 HPSLFGALPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
+P + A+P + P N Y A + +PP I P N +M
Sbjct: 135 NPEMNSAIPTTQFIPNCNEYILAAQIQQINLFSNIPP----------IYPSNSIVSMPST 184
Query: 268 SP------DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLN-NSPGS 320
P + N P+ M + L P+ PG + + LN P
Sbjct: 185 HPVPMIDYSIPINNLPKTDQMTMKPVLDVQQITQDNLNRPIVTPGSFMSYPFLNVQIPTG 244
Query: 321 VSPAVANSNPST--SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 378
A N+N S+ +S S GP G NLFIYH+PQE GD +L F FG V+S
Sbjct: 245 YQAAFPNNNLSSINQNSNDVKSTPLPTGPEGCNLFIYHLPQEIGDLQLYQIFMHFGNVIS 304
Query: 379 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
+KV+VD+AT SKCFGFVSY+ PA A AI MNG +G K+LKVQLK+
Sbjct: 305 SKVYVDRATNQSKCFGFVSYDDPACANAAIKSMNGYHIGTKRLKVQLKK 353
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E +S+ER KLFVG + K+ T+ + MF +F ++E ++KD+ S+GC FV +
Sbjct: 9 ENIASDER-KLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGN-SKGCAFVKFLNH 66
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+NA H + + GASS L VK+AD + ++ KL
Sbjct: 67 TDARAAINALHASQKMEGASSSLVVKFADTDKQKQIRKL 105
>gi|124286791|ref|NP_034290.2| CUGBP Elav-like family member 2 isoform 6 [Mus musculus]
Length = 478
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 222/447 (49%), Gaps = 48/447 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 236 QRRLQQQLAQQMQQLNTAT-----WGNLTGLGGLTPQYLALLQQATSSSNLGAF--SGIQ 288
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 289 QMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPV-AASTPNSTAG 347
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 349
+ ++ L G +G LNN A N GG G+ G G G
Sbjct: 348 AAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALN--------GGLGATGLTNGTAG 396
Query: 350 ANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
+ + Q + G Q+ A A + S + ++ S+ GFVSY++P SAQ AI
Sbjct: 397 T---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAI 451
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR +KPY
Sbjct: 452 QAMNGFQIGMKRLKVQLKRSKNDSKPY 478
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|237757269|ref|NP_001153764.1| CUGBP Elav-like family member 2 isoform 7 [Mus musculus]
Length = 472
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 222/447 (49%), Gaps = 48/447 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 230 QRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAFS--GIQ 282
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 283 QMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPV-AASTPNSTAG 341
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 349
+ ++ L G +G LNN A N GG G+ G G G
Sbjct: 342 AAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALN--------GGLGATGLTNGTAG 390
Query: 350 ANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
+ + Q + G Q+ A A + S + ++ S+ GFVSY++P SAQ AI
Sbjct: 391 T---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAI 445
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR +KPY
Sbjct: 446 QAMNGFQIGMKRLKVQLKRSKNDSKPY 472
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 188
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 189 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 228
>gi|348575367|ref|XP_003473461.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Cavia
porcellus]
gi|354467974|ref|XP_003496442.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4
[Cricetulus griseus]
Length = 478
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 222/447 (49%), Gaps = 48/447 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 236 QRRLQQQLAQQMQQLNTAT-----WGNLTGLGGLTPQYLALLQQATSSSNLGAF--SGIQ 288
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 289 QMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPV-AASTPNSTAG 347
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 349
+ ++ L G +G LNN A N GG G+ G G G
Sbjct: 348 AAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALN--------GGLGATGLTNGTAG 396
Query: 350 ANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
+ + Q + G Q+ A A + S + ++ S+ GFVSY++P SAQ AI
Sbjct: 397 T---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAI 451
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR +KPY
Sbjct: 452 QAMNGFQIGMKRLKVQLKRSKNDSKPY 478
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|289812790|gb|ADD18414.1| RNA-binding protein CUGBP1/BrUNO [Glossina morsitans morsitans]
Length = 706
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 132/196 (67%), Gaps = 1/196 (0%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 291 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 350
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 351 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 409
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I++ +LR SKGCAF+ + TK A++A++ +N MEG + PLVVK+ADT+KE
Sbjct: 410 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKTLNQNKTMEGCTSPLVVKFADTQKE 469
Query: 187 RQARRAQKAQSQANNL 202
++ ++ Q+ Q+ NL
Sbjct: 470 KEQKKIQQIQANLWNL 485
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 47/59 (79%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS++
Sbjct: 648 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTNLSKCFGFVSFD 706
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 296 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 355
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 356 AQDALHNVKTLNGMYHPIQMKPADSENR 383
>gi|395539009|ref|XP_003771466.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Sarcophilus
harrisii]
Length = 478
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 222/447 (49%), Gaps = 48/447 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 236 QRRLQQQLAQQMQQLNTAT-----WGNLTGLGGLTPQYLALLQQATSSSNLGAF--SGIQ 288
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 289 QMAGMNALQLQNLATLAAAAAAAQTSATTTNANPLSTTSSALGALTSPV-AASTPNSTAG 347
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 349
+ ++ L G +G LNN A N GG G+ G G G
Sbjct: 348 AAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALN--------GGLGATGLTNGTAG 396
Query: 350 ANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
+ + Q + G Q+ A A + S + ++ S+ GFVSY++P SAQ AI
Sbjct: 397 T---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAI 451
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR +KPY
Sbjct: 452 QAMNGFQIGMKRLKVQLKRSKNDSKPY 478
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|350417598|ref|XP_003491500.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
2-like [Bombus impatiens]
Length = 635
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 107 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 166
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K SE +V +FSIYGTI++
Sbjct: 167 QNALHNVKTFSGMRHPIQMKPADSE-NRNERKLFVGMLSKKFSENDVRNMFSIYGTIEEC 225
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 226 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 286 QQLQTNLWNI 295
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
T + QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 538 TSTDKQIEGPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVS 597
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++ ASAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 598 YDNAASAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 635
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +E + MF + ++E ++++D T + S+ C FV S+
Sbjct: 189 DSENRNER-KLFVGMLSKKFSENDVRNMFSIYGTIEECSVLRDSTGK-SKACAFVTFASK 246
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 247 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 106 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 165
Query: 407 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N G + +Q+K + +N+
Sbjct: 166 AQNALHNVKTFSGMRHPIQMKPADSENR 193
>gi|340718155|ref|XP_003397537.1| PREDICTED: CUGBP Elav-like family member 2-like [Bombus terrestris]
Length = 627
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 106 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 165
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K SE +V +FSIYGTI++
Sbjct: 166 QNALHNVKTFSGMRHPIQMKPADSE-NRNERKLFVGMLSKKFSENDVRNMFSIYGTIEEC 224
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 225 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 284
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 285 QQLQTNLWNI 294
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ A
Sbjct: 535 QIEGPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNAA 594
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 595 SAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 627
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +E + MF + ++E ++++D T + S+ C FV S+
Sbjct: 188 DSENRNER-KLFVGMLSKKFSENDVRNMFSIYGTIEECSVLRDSTGK-SKACAFVTFASK 245
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 246 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 284
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 105 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 164
Query: 407 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N G + +Q+K + +N+
Sbjct: 165 AQNALHNVKTFSGMRHPIQMKPADSENR 192
>gi|344248420|gb|EGW04524.1| CUG-BP- and ETR-3-like factor 6 [Cricetulus griseus]
Length = 321
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 175/341 (51%), Gaps = 34/341 (9%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 1 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 61 MSGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPT---PLPLGACGAY---- 107
Query: 229 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 288
+ + Q L PG G + V A +++ + P P
Sbjct: 108 ---TTAILQHQAALLAAAQGPGL-GQVAAVAAQMQHVAAFSLVAAPLLPTAANTSPG--- 160
Query: 289 GSGYPAVPGLQYPM---------PYPGGMLGHRPLNNS-----PGSVSPAVANSNPSTSS 334
GSG A+PGL PM P G G L N+ P + A A + + S
Sbjct: 161 GSGPGALPGLPAPMGVNGFGSLTPQTNGQPGSDTLYNNGLSPYPAAYPSAYAPVSTAFSQ 220
Query: 335 SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFG
Sbjct: 221 QPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFG 280
Query: 395 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
FVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 281 FVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 321
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K E + +F+ F ++E +++ S+GC FV S+ EA A+ H +T+
Sbjct: 4 KQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAAIQGLHGSRTMS 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK AD + ER ++
Sbjct: 63 GASSSLVVKLADTDRERALRRM 84
>gi|324508266|gb|ADY43493.1| CUGBP Elav family member 1-A [Ascaris suum]
Length = 539
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 215/439 (48%), Gaps = 43/439 (9%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +TE + AMF F +++ ++KD + SRGC FV +R
Sbjct: 117 DSENRNER-KLFVGMLNKRLTEEDVKAMFAHFGHIEDCTVLKDSDGK-SRGCAFVTFANR 174
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A +A+ H+ +T+ G S+P+ VK+AD + E+ E K +G P + + +I
Sbjct: 175 SYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEK-EAKKTVG--PS--ASPTLQGTNNIA 229
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP-LVVKWADTEK 185
+I+ Q+L+ +QQ T+ LA L ++GS P ++ +
Sbjct: 230 ASIQ--QLLQSAQQPCLANTNPALGTQLSVLATL--------LQGSGQPNMLSILGNANA 279
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASG-------SYGLM 238
Q ++ A Q L SQ ALP+ P Y A+ ++
Sbjct: 280 LHQQQQQLIAIQQQQRLLELISQQQ--LAALPVQQTPTDLSTAYYAASHPGGVPITFATA 337
Query: 239 QYRLPPMQNQPGFHGIIPPVNQGNAMRG-ASPDLSSNMGPRNYAMPPSGFVGSGYPAVPG 297
P + G P + N + G S +L G A PPS + +
Sbjct: 338 PTESPGLSTASIVQGTSPTEAKANFLLGNGSSNLIQLTGA---AAPPSNYDALQHAYAGI 394
Query: 298 LQYPMPYPG-GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYH 356
QY +P G + L N+ + P+ S T SGGQ +GP G NLFIYH
Sbjct: 395 HQYAAAFPQLATNGQQMLVNA----------ATPTMSVVTSTTSGGQSKGPDGCNLFIYH 444
Query: 357 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416
+PQ+F D +L F FG +LSAKVF+DK T +SKCFGFVSY++ SAQNAIA +NG Q+
Sbjct: 445 LPQDFADSDLVTTFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNAVSAQNAIAALNGFQI 504
Query: 417 GGKKLKVQLKRDNKQNKPY 435
G K+LKVQLKR K +KPY
Sbjct: 505 GSKRLKVQLKR-GKDSKPY 522
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 119/180 (66%), Gaps = 1/180 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E + +F++F V ++N+++DKTT+ASRGCCFV R +A A
Sbjct: 35 DTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTFYRRADAIAA 94
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E +V A+F+ +G I+D
Sbjct: 95 QAALHNIRVLPQMHHPVQMKPADSE-NRNERKLFVGMLNKRLTEEDVKAMFAHFGHIEDC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE++A++
Sbjct: 154 TVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEKEAKKT 213
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
P +F+ IP+ +G+QE F+ FG V V DK T S+ FV++
Sbjct: 34 PDTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTF 85
>gi|380013066|ref|XP_003690591.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis florea]
Length = 582
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 84 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 143
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K +E +V +FS+YGTI++
Sbjct: 144 QNALHNVKTFNGMRHPIQMKPADSE-NRNERKLFVGMLSKKFTENDVRNMFSVYGTIEEC 202
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 203 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 262
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 263 QQLQTNLWNI 272
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ A
Sbjct: 490 QIEGPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNVA 549
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 550 SAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 582
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TE + MF + ++E ++++D T + S+ C FV S+
Sbjct: 166 DSENRNER-KLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGK-SKACAFVTFASK 223
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 224 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 262
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 83 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 142
Query: 407 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N G + +Q+K + +N+
Sbjct: 143 AQNALHNVKTFNGMRHPIQMKPADSENR 170
>gi|328780076|ref|XP_003249751.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis mellifera]
Length = 628
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 107 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 166
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K +E +V +FS+YGTI++
Sbjct: 167 QNALHNVKTFNGMRHPIQMKPADSE-NRNERKLFVGMLSKKFTENDVRNMFSVYGTIEEC 225
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 226 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 286 QQLQTNLWNI 295
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ A
Sbjct: 536 QIEGPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNVA 595
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 596 SAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 628
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TE + MF + ++E ++++D T + S+ C FV S+
Sbjct: 189 DSENRNER-KLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGK-SKACAFVTFASK 246
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 247 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 106 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 165
Query: 407 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N G + +Q+K + +N+
Sbjct: 166 AQNALHNVKTFNGMRHPIQMKPADSENR 193
>gi|355755315|gb|EHH59062.1| CUGBP Elav-like family member 5, partial [Macaca fascicularis]
Length = 368
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 187/398 (46%), Gaps = 49/398 (12%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA A H +KTLPG + P+QVK AD E
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR--GGXXXXXXXXXXXXX 58
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
GCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 59 XXXXXXXXXXXXXXXXXXXXXXXXXXXGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 118
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VVK+ADT+KER RR Q+ Q L PSL LP PY+ Y +
Sbjct: 119 VVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQA 161
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYP 293
LMQ + + + + P V +S N P P SG G
Sbjct: 162 LMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTT 219
Query: 294 AVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSGG 337
AVPGL P+ P+PGG H L + G V SP VA + +P+ S
Sbjct: 220 AVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLHPAFSGVQ- 275
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
Q GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS
Sbjct: 276 -----QYTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVS 330
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 331 FDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 368
>gi|357479035|ref|XP_003609803.1| FCA [Medicago truncatula]
gi|355510858|gb|AES92000.1| FCA [Medicago truncatula]
Length = 862
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 145/255 (56%), Gaps = 24/255 (9%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKD+ T +GCCF+ + +EAD+A+
Sbjct: 157 AKLFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIR 216
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K S EV +FS YG I+D
Sbjct: 217 ALHNRHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASVKEVEEVFSKYGRIED 276
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ++R Q+ S+GC F+KY ++ ALAA+ A+NG + M G PL+V++AD ++ RQ
Sbjct: 277 VYLMRDDQKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDS 336
Query: 192 AQKAQSQANNLPNADSQHPSL--FGALPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQN- 247
A A P DS L + PMG + PP N +R P N
Sbjct: 337 RGPAFGSAGFGPRLDSPGTRLPSNNSDPMGDHIPPPNA-------------WRPIPQPNT 383
Query: 248 ----QPGFHGIIPPV 258
GFHG+ PP+
Sbjct: 384 GTSFNAGFHGMGPPL 398
>gi|168041276|ref|XP_001773118.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675665|gb|EDQ62158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ +TE ++ MF E V EV IIKDK T +GCCFV + +EA++A+
Sbjct: 16 VKLFVGSVPRTITEDEVRPMFAEHGNVLEVAIIKDKRTGNQQGCCFVKYSTVEEAERAIR 75
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+KTLPG SP+QV+YADGE ERL EHKLF+G L K SE E+ LF YG + D
Sbjct: 76 ALHNQKTLPGGVSPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELFIPYGRVDD 135
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ I+R Q+ S+GCAF+KY ++ A AA+ A+NG H M+G PL V++AD
Sbjct: 136 VYIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIMQGCDQPLAVRFAD 186
>gi|209878013|ref|XP_002140448.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556054|gb|EEA06099.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 546
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 217/458 (47%), Gaps = 73/458 (15%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG++P+++ E +L +F+ + V ++I+++K T RG V S +AD A+
Sbjct: 110 IKLFVGRIPRNIEEDELKKLFELYGNVVNISIVREKNTGIHRGAALVTMESIAQADYAIR 169
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+ K L PL+V+Y+ GE ER + KLF+G LPKN++E E+S +
Sbjct: 170 ELNLIKVLDNLRGPLKVQYSTGEAERFGFEAESCIPGVDQVKLFVGALPKNITEEEISDV 229
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YG I ++ I+R +GCAF+KY KEQ L A+ +++G + + PL V++A
Sbjct: 230 FSPYGQINEIFIMREIHTGFCRGCAFVKYAFKEQGLYAIASLHGAATLGDVNRPLEVRFA 289
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
S ANNL H S M + PP + +Y + R
Sbjct: 290 ------------SRSSNANNLFLTHGLHHS-----AMAHNPP-------SGSAYHIFNNR 325
Query: 242 LP-PMQNQPGFHGIIPPV------NQGNAMR--------GASPDLSSNMGPRNYAMPPSG 286
P + N + P V ++G+ R G S ++NM PR+ P SG
Sbjct: 326 KPCHIVNDASYLSANPTVVGNILSHRGSCSRNITLFDHNGISVAATTNMYPRSRGHPLSG 385
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLG-----------HRPLNN-SPGSVSPAVANSNPSTSS 334
+ A MP GM H ++ + V P N P S
Sbjct: 386 SPSNSTAAAAITANLMPRCIGMWKEYFTSDGKPYYHNEISRVTQWEVPPEFMNFRPVFSR 445
Query: 335 SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
Q+ GPPGAN+FI+++P E+ + L + F FG +LSA + +DK +G +K
Sbjct: 446 --------QVVGPPGANIFIFNVPYEWEKKSLIHHFCRFGHILSAHLMIDKNSGRNKGVA 497
Query: 395 FVSYESPASAQNAIAMMNG-CQLGGKKLKVQLKRDNKQ 431
FVSY+ SA +A+ MNG G+KLKV +K+ +Q
Sbjct: 498 FVSYDHVHSAADAVNNMNGFVTESGRKLKVSIKQGQEQ 535
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLFVG +PK++TE ++ +F + ++E+ I+++ T RGC FV +++ A
Sbjct: 208 DQVKLFVGALPKNITEEEISDVFSPYGQINEIFIMREIHTGFCRGCAFVKYAFKEQGLYA 267
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + H TL + PL+V++A
Sbjct: 268 IASLHGAATLGDVNRPLEVRFA 289
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAA 159
+E KLF+G +P+N+ E E+ LF +YG + ++ I+R +G A + E+ QA A
Sbjct: 108 MEIKLFVGRIPRNIEEDELKKLFELYGNVVNISIVREKNTGIHRGAALVTMESIAQADYA 167
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
+ +N ++ PL V+++ E ER A+ +P D Q GALP
Sbjct: 168 IRELNLIKVLDNLRGPLKVQYSTGEAERFGFEAESC------IPGVD-QVKLFVGALP 218
>gi|195117924|ref|XP_002003495.1| GI17944 [Drosophila mojavensis]
gi|193914070|gb|EDW12937.1| GI17944 [Drosophila mojavensis]
Length = 851
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 383 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 442
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLFIGML K ++E +V LF ++
Sbjct: 443 RAALKAQDALHNVKTLSGMYHPIQMKPADSE-NRNERKLFIGMLNKKLNENDVRKLFEVH 501
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 502 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 561
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 562 EKEQKKIQQIQANLWNL 578
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 757 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 816
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 817 PESAQMAIKSMNGFQVGTKRLKVQLKKPKDASKPY 851
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ EA++ +F YG + + +LR SKGC F+
Sbjct: 379 VTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 438
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 439 FYTRRAALKAQDALHNVKTLSGMYHPIQMKPADSENRNERK 479
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 388 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 447
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 448 AQDALHNVKTLSGMYHPIQMKPADSENR 475
>gi|116007320|ref|NP_001036356.1| bruno-2, isoform E [Drosophila melanogaster]
gi|442627593|ref|NP_001260411.1| bruno-2, isoform L [Drosophila melanogaster]
gi|113194979|gb|ABI31310.1| bruno-2, isoform E [Drosophila melanogaster]
gi|440213741|gb|AGB92946.1| bruno-2, isoform L [Drosophila melanogaster]
Length = 893
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 319 GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 378
G+ S V S +++G TG QIEGP G+NLFIYH+PQEF D +L + F FG VLS
Sbjct: 779 GAASQPVTTSALQAAAAGVTGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLS 836
Query: 379 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 837 AKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 893
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 410
+F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y + +A A A+
Sbjct: 297 MFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 356
Query: 411 MNGCQLGGKKLKVQLKRDNKQNK 433
N L G +Q+K + +N+
Sbjct: 357 HNIKTLDGMHHPIQMKPADSENR 379
>gi|195435047|ref|XP_002065513.1| GK15493 [Drosophila willistoni]
gi|194161598|gb|EDW76499.1| GK15493 [Drosophila willistoni]
Length = 866
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 371 EKEPDPDNIKMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 430
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 431 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 489
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 490 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 549
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 550 EKEQKKIQQIQANLWNL 566
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 772 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 831
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 832 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 866
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E ++ +F YG + + +LR SKGC F+
Sbjct: 367 VTYGEKEPDPDNIKMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 426
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 427 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 467
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 376 PDNIKMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 435
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 436 AQDALHNVKTLNGMYHPIQMKPADSENR 463
>gi|2148976|gb|AAB58464.1| bruno [Drosophila melanogaster]
Length = 604
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 202
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 203 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 261
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 262 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 321
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 322 EKEQKKIQQIQANLWNL 338
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 511 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 570
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 571 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 604
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 139 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 198
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 199 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 239
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 148 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 207
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 208 AQDALHNVKTLNGMYHPIQMKPADSENR 235
>gi|326505362|dbj|BAK03068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 601
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 130/189 (68%), Gaps = 1/189 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+F GQ+P++M EA+L MF++F V ++N+++DK T S+GCCFV SR+ A A
Sbjct: 35 DAIKMFCGQIPRNMHEAELRDMFEQFGPVFQLNVLRDKQTGESKGCCFVTFYSRKSALDA 94
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN +TL G+ P+Q+K AD E R E KLF+GM+ KN+ E + +LF YGTI+D
Sbjct: 95 QNALHNLRTLNGSHHPIQMKPADTE-NRNERKLFVGMVSKNLDEPNIRSLFQSYGTIEDC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR + S+GCAF+ ++ ++ AL A+++++ MEG S PLVVK+ADT K+++ ++
Sbjct: 154 TVLRDANGKSRGCAFVTFQKRQCALNAIKSMHQSQTMEGCSSPLVVKFADTPKDKETKKI 213
Query: 193 QKAQSQANN 201
Q+ + NN
Sbjct: 214 QQQYTTHNN 222
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 210/456 (46%), Gaps = 49/456 (10%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG V K++ E + ++F+ + +++ +++D + SRGC FV R
Sbjct: 117 DTENRNER-KLFVGMVSKNLDEPNIRSLFQSYGTIEDCTVLRDANGK-SRGCAFVTFQKR 174
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL----------FIGMLPKNVSE 116
Q A A+ + H +T+ G SSPL VK+AD ++ K+ + P S
Sbjct: 175 QCALNAIKSMHQSQTMEGCSSPLVVKFADTPKDKETKKIQQQYTTHNNGLMQQFPPGASM 234
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL----EAINGKHKMEGS 172
+ + Y + ++ L QQ K FL AL + + + G+
Sbjct: 235 PNPQHM-NTYNFLPEIGNLVFLQQLFKNYGFLGNNGTALNFGALNNLLQMFSNNMNLNGN 293
Query: 173 SVPLVVK-WADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQA 231
L+ +Q SQ+ N+ D QH L AP N
Sbjct: 294 KPSLLPPPQGPGTSTNMNLSSQHGSSQSINV--QDQQH-----TLTSPRAPAANANNGTY 346
Query: 232 SGSYGLMQYRLPPMQN---QPGFHGIIPPVNQGNAMRGASPDLSS-NMGPRNYAMPPSGF 287
S L+ P N P + PP N +P +++ P AMP S +
Sbjct: 347 SNENSLLMCGAGPYNNGGPSPN-NAAGPPTTHHNQNGALTPAVATPGTNPYTTAMP-SLY 404
Query: 288 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGS------- 340
+G P G ++ +NN G + PA + +P+T+SS +
Sbjct: 405 TNTGNPLTNGGADAHHNLQSLVAMSQVNN--GGMLPANMHPSPTTNSSTAPQASFPVFPS 462
Query: 341 ---------GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 391
G EGP GANLFIYH+PQE+ D +L AF ++G+++SAKVFVDK T SK
Sbjct: 463 QSYITAQVAGKHTEGPDGANLFIYHLPQEYNDTDLAQAFASYGQIISAKVFVDKTTNRSK 522
Query: 392 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
CFGFVS+++PASAQ AI MNG Q+G K+LKVQLK+
Sbjct: 523 CFGFVSFDNPASAQAAINQMNGFQIGMKRLKVQLKK 558
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F IP+ + EL + F+ FG V V DK TG SK FV++ S SA +
Sbjct: 34 PDAIKMFCGQIPRNMHEAELRDMFEQFGPVFQLNVLRDKQTGESKGCCFVTFYSRKSALD 93
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 94 AQNALHNLRTLNGSHHPIQMKPADTENR 121
>gi|24583877|ref|NP_723739.1| arrest, isoform A [Drosophila melanogaster]
gi|281364913|ref|NP_001162963.1| arrest, isoform E [Drosophila melanogaster]
gi|15291827|gb|AAK93182.1| LD29068p [Drosophila melanogaster]
gi|22946320|gb|AAN10812.1| arrest, isoform A [Drosophila melanogaster]
gi|220945910|gb|ACL85498.1| aret-PA [synthetic construct]
gi|220955600|gb|ACL90343.1| aret-PA [synthetic construct]
gi|272407017|gb|ACZ94249.1| arrest, isoform E [Drosophila melanogaster]
Length = 604
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 202
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 203 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 261
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 262 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 321
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 322 EKEQKKIQQIQANLWNL 338
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 511 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 570
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 571 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 604
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 139 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 198
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 199 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 239
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 148 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALK 207
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 208 AQDALHNVKTLNGMYHPIQMKPADSENR 235
>gi|442627567|ref|NP_723738.2| arrest, isoform F [Drosophila melanogaster]
gi|440213732|gb|AAN10811.2| arrest, isoform F [Drosophila melanogaster]
Length = 620
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 202
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 203 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 261
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 262 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 321
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 322 EKEQKKIQQIQANLWNL 338
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 527 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 586
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 587 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 620
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 139 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 198
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 199 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 239
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 148 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALK 207
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 208 AQDALHNVKTLNGMYHPIQMKPADSENR 235
>gi|302818861|ref|XP_002991103.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
gi|300141197|gb|EFJ07911.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
Length = 509
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 132/198 (66%), Gaps = 13/198 (6%)
Query: 1 MAESKKEKKSSEER-------VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR 53
+A K+E+ +S+ VKLFVG VP+ +TE Q+ +MF+E+ V EV IIKD+ T
Sbjct: 21 VAGHKRERDNSDSSEGGQHTYVKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTG 80
Query: 54 ASRG---CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---EHKLFI 107
+G CCFV SR EAD+A+ +N++TLPG +SP+QV+YADGE ERL EHKLF+
Sbjct: 81 HQQGMFCCCFVKYSSRDEADRAIRCLNNQRTLPGGASPVQVRYADGERERLGAIEHKLFV 140
Query: 108 GMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKH 167
G L K+ SE E+ +FS YG + D+ ++R + S+GCAF+KY +++ A AA+ A+N +
Sbjct: 141 GCLNKHASEREIEEVFSPYGRVDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDVY 200
Query: 168 KMEGSSVPLVVKWADTEK 185
M G PL V++AD ++
Sbjct: 201 IMRGCDQPLAVRFADPKR 218
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 313 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQA 372
P + P S S VA +S + G LF+ +P+ +Q++ + F+
Sbjct: 9 PHHGDPSSSSWRVAGHKRERDNSDSSEGGQHTY----VKLFVGSVPRTITEQQVRSMFEE 64
Query: 373 FGRVLSAKVFVDKATGVSK---CFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLK 426
+G VL + D+ TG + C FV Y S A AI +N + L G VQ++
Sbjct: 65 YGEVLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADRAIRCLNNQRTLPGGASPVQVR 122
>gi|442627571|ref|NP_001260404.1| arrest, isoform H [Drosophila melanogaster]
gi|442627573|ref|NP_001260405.1| arrest, isoform I [Drosophila melanogaster]
gi|442627575|ref|NP_001260406.1| arrest, isoform J [Drosophila melanogaster]
gi|442627577|ref|NP_001260407.1| arrest, isoform K [Drosophila melanogaster]
gi|440213734|gb|AGB92939.1| arrest, isoform H [Drosophila melanogaster]
gi|440213735|gb|AGB92940.1| arrest, isoform I [Drosophila melanogaster]
gi|440213736|gb|AGB92941.1| arrest, isoform J [Drosophila melanogaster]
gi|440213737|gb|AGB92942.1| arrest, isoform K [Drosophila melanogaster]
Length = 573
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 112 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 171
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 172 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 230
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 231 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 290
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 291 EKEQKKIQQIQANLWNL 307
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 480 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 539
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 540 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 573
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 108 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 167
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 168 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 208
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 117 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALK 176
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 177 AQDALHNVKTLNGMYHPIQMKPADSENR 204
>gi|66802807|ref|XP_635247.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60463542|gb|EAL61727.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 489
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVGQ+PK E ++ +F A ++ V++IK+KTT +GC FV PSR+EAD+A+
Sbjct: 3 TKLFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNEPQGCAFVSVPSREEADRAIE 62
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
HN K G + LQVKYAD E E+L KLF+GMLP++ E ++ LF +G ++D+ I
Sbjct: 63 QLHNSKKFQGVLNNLQVKYADSEQEKLASKLFVGMLPRSYEEEQIRELFEPHGVVEDICI 122
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LRG SKGC F+K++ +E AL+A+ +NG K++GS PLVVK+ADTEK+++ +
Sbjct: 123 LRGPNSESKGCGFIKFDNRESALSAIATLNG-MKLDGSPNPLVVKFADTEKDKKKK 177
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
LFV +P + ++ LL +F+++ +V + DK T S+G FV + A+ A++
Sbjct: 405 LFVYNIPNYFSDNDLLGLFQQYGIVVSAKVYVDKNTGVSKGFGFVSYDNPASANLAISNL 464
Query: 77 H 77
H
Sbjct: 465 H 465
>gi|195388102|ref|XP_002052729.1| GJ17715 [Drosophila virilis]
gi|194149186|gb|EDW64884.1| GJ17715 [Drosophila virilis]
Length = 831
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 363 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 422
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 423 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 481
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 482 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 541
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 542 EKEQKKIQQIQANLWNL 558
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 737 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 796
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 797 PESAQMAIKAMNGFQVGTKRLKVQLKKPKDASKPY 831
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ EA++ +F YG + + +LR SKGC F+
Sbjct: 359 VTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 418
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 419 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 459
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 368 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 427
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 428 AQDALHNVKTLNGMYHPIQMKPADSENR 455
>gi|195388108|ref|XP_002052732.1| GJ17718 [Drosophila virilis]
gi|194149189|gb|EDW64887.1| GJ17718 [Drosophila virilis]
Length = 738
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 133/198 (67%), Gaps = 2/198 (1%)
Query: 1 MAESKKEKKSSE-ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCC 59
MA+++ K + + +K+FVGQ+PK E +L +F++F V +N+++DK T SRGCC
Sbjct: 262 MADTESAKDQPDADNIKMFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISRGCC 321
Query: 60 FVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEV 119
FV +R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V
Sbjct: 322 FVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKFTEADV 380
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK
Sbjct: 381 RQLFTGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVK 440
Query: 180 WADTEKERQARRAQKAQS 197
+ADT+KE+ ++ Q+ Q+
Sbjct: 441 FADTQKEKDQKKMQQLQA 458
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 644 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 703
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 704 PHSANAAIQAMHGFQIGTKRLKVQLKRPKDSGKPY 738
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 410
+F+ IP+ + + +L F+ FGRV + V DK T +S+ FV+Y + +A A A+
Sbjct: 279 MFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 338
Query: 411 MNGCQLGGKKLKVQLKRDNKQNK 433
N L G +Q+K + +N+
Sbjct: 339 HNIKTLDGMHHPIQMKPADSENR 361
>gi|2231301|gb|AAB61993.1| testis-specific RNP-type RNA binding protein [Drosophila
melanogaster]
Length = 808
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 347 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 406
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 407 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 465
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 466 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 525
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 526 EKEQKKIQQIQANLWNL 542
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 715 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 774
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 775 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 808
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 343 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 402
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 403 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 443
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 352 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 411
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 412 AQDALHNVKTLNGMYHPIQMKPADSENR 439
>gi|259089631|gb|ACV91671.1| AT31783p [Drosophila melanogaster]
Length = 810
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 349 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 408
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 409 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 467
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 468 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 527
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 528 EKEQKKIQQIQANLWNL 544
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 717 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 776
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 777 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 810
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 345 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 404
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 405 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 445
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 354 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 413
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 414 AQDALHNVKTLNGMYHPIQMKPADSENR 441
>gi|195351033|ref|XP_002042041.1| GM26763 [Drosophila sechellia]
gi|194123865|gb|EDW45908.1| GM26763 [Drosophila sechellia]
Length = 816
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 343 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 402
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 403 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 461
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 462 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 521
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 522 EKEQKKIQQIQANLWNL 538
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 723 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 782
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 783 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 816
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 339 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 398
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 399 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 439
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 348 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 407
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 408 AQDALHNVKTLNGMYHPIQMKPADSENR 435
>gi|194861289|ref|XP_001969750.1| GG23776 [Drosophila erecta]
gi|190661617|gb|EDV58809.1| GG23776 [Drosophila erecta]
Length = 837
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 364 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 423
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 424 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 482
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 483 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 542
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 543 EKEQKKIQQIQANLWNL 559
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 744 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 803
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 804 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 837
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 360 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 419
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 420 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 460
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 369 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 428
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 429 AQDALHNVKTLNGMYHPIQMKPADSENR 456
>gi|195472345|ref|XP_002088461.1| GE18580 [Drosophila yakuba]
gi|194174562|gb|EDW88173.1| GE18580 [Drosophila yakuba]
Length = 830
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 357 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 416
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 417 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 475
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 476 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 535
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 536 EKEQKKIQQIQANLWNL 552
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 737 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 796
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 797 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 830
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 353 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 412
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 413 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 453
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 362 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 421
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 422 AQDALHNVKTLNGMYHPIQMKPADSENR 449
>gi|195351037|ref|XP_002042043.1| GM26785 [Drosophila sechellia]
gi|194123867|gb|EDW45910.1| GM26785 [Drosophila sechellia]
Length = 644
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 305 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 364
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 365 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 423
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 424 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 483
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 484 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 521
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 387 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 444
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 445 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 483
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 344 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 298 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYT 357
Query: 401 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
+A A A+ N L G +Q+K + +N+
Sbjct: 358 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 391
>gi|24583873|ref|NP_723737.1| arrest, isoform B [Drosophila melanogaster]
gi|442627569|ref|NP_001260403.1| arrest, isoform G [Drosophila melanogaster]
gi|22946318|gb|AAN10810.1| arrest, isoform B [Drosophila melanogaster]
gi|375065944|gb|AFA28453.1| FI19388p1 [Drosophila melanogaster]
gi|440213733|gb|AGB92938.1| arrest, isoform G [Drosophila melanogaster]
Length = 810
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 349 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 408
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 409 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 467
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 468 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 527
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 528 EKEQKKIQQIQANLWNL 544
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 717 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 776
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 777 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 810
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 345 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 404
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 405 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 445
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 354 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALK 413
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 414 AQDALHNVKTLNGMYHPIQMKPADSENR 441
>gi|19921186|ref|NP_609559.1| bruno-2, isoform A [Drosophila melanogaster]
gi|17862264|gb|AAL39609.1| LD19052p [Drosophila melanogaster]
gi|22946323|gb|AAF53181.2| bruno-2, isoform A [Drosophila melanogaster]
gi|220943144|gb|ACL84115.1| bru-2-PA [synthetic construct]
Length = 632
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 344 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 286 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYT 345
Query: 401 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
+A A A+ N L G +Q+K + +N+
Sbjct: 346 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 379
>gi|195578717|ref|XP_002079210.1| GD23828 [Drosophila simulans]
gi|194191219|gb|EDX04795.1| GD23828 [Drosophila simulans]
Length = 821
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 348 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 407
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 408 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 466
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 467 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 526
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 527 EKEQKKIQQIQANLWNL 543
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 728 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 787
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 788 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 821
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 344 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 403
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 404 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 444
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 353 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 412
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 413 AQDALHNVKTLNGMYHPIQMKPADSENR 440
>gi|302819965|ref|XP_002991651.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
gi|300140500|gb|EFJ07222.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
Length = 480
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 132/199 (66%), Gaps = 14/199 (7%)
Query: 1 MAESKKEKKSSEER-------VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR 53
+A K+E+ +S+ VKLFVG VP+ +TE Q+ +MF+E+ V EV IIKD+ T
Sbjct: 21 VAGHKRERDNSDSSEGGQHTYVKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTG 80
Query: 54 ASRG---CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL----EHKLF 106
+G CCFV SR EAD+A+ +N++TLPG +SP+QV+YADGE ERL EHKLF
Sbjct: 81 HQQGMFCCCFVKYSSRDEADRAIRCLNNQRTLPGGASPVQVRYADGERERLAGAIEHKLF 140
Query: 107 IGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGK 166
+G L K+ SE E+ +FS YG + D+ ++R + S+GCAF+KY +++ A AA+ A+N
Sbjct: 141 VGCLNKHASEREIEEVFSPYGRVDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDV 200
Query: 167 HKMEGSSVPLVVKWADTEK 185
+ M G PL V++AD ++
Sbjct: 201 YIMRGCDQPLAVRFADPKR 219
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 313 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQA 372
P + P S S VA +S + G LF+ +P+ +Q++ + F+
Sbjct: 9 PHHGDPSSSSWRVAGHKRERDNSDSSEGGQHTY----VKLFVGSVPRTITEQQVRSMFEE 64
Query: 373 FGRVLSAKVFVDKATGVSK---CFGFVSYESPASAQNAIAMMN 412
+G VL + D+ TG + C FV Y S A AI +N
Sbjct: 65 YGEVLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADRAIRCLN 107
>gi|386769531|ref|NP_001246000.1| bruno-2, isoform G [Drosophila melanogaster]
gi|442627595|ref|NP_723742.2| bruno-2, isoform M [Drosophila melanogaster]
gi|383291458|gb|AFH03674.1| bruno-2, isoform G [Drosophila melanogaster]
gi|440213742|gb|AAF53180.4| bruno-2, isoform M [Drosophila melanogaster]
Length = 664
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 344 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 286 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYT 345
Query: 401 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
+A A A+ N L G +Q+K + +N+
Sbjct: 346 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 379
>gi|194761400|ref|XP_001962917.1| GF14192 [Drosophila ananassae]
gi|190616614|gb|EDV32138.1| GF14192 [Drosophila ananassae]
Length = 852
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 377 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 436
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 437 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 495
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 496 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 555
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 556 EKEQKKIQQIQANLWNL 572
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 758 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 817
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 818 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 852
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 373 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 432
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 433 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 473
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 382 PDNIKMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 441
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 442 AQDALHNVKTLNGMYHPIQMKPADSENR 469
>gi|195035643|ref|XP_001989285.1| GH11642 [Drosophila grimshawi]
gi|193905285|gb|EDW04152.1| GH11642 [Drosophila grimshawi]
Length = 833
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 363 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 422
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 423 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 481
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 482 GGIEECTVLRDPNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 541
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 542 EKEQKKIQQIQANLWNL 558
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 739 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 798
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 799 PESAQMAIKAMNGFQVGTKRLKVQLKKPKDASKPY 833
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ EA++ +F YG + + +LR SKGC F+
Sbjct: 359 VTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 418
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 419 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 459
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 333 SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 392
S S G + P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 354 SDSAVVTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKG 413
Query: 393 FGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 414 CCFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 455
>gi|255556436|ref|XP_002519252.1| Flowering time control protein FCA, putative [Ricinus communis]
gi|223541567|gb|EEF43116.1| Flowering time control protein FCA, putative [Ricinus communis]
Length = 811
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ +E + +F++ V EV +IKDK T +GCCFV + +EAD+A+
Sbjct: 161 AKLFVGSVPRTASEEDIRPLFEQHGNVIEVALIKDKRTGQQQGCCFVKYATSEEADRAIR 220
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV++ADGE ERL E+KLF+G L K +E EV +FS YG ++D
Sbjct: 221 ALHNQHTLPGGIGPIQVRFADGERERLGAVEYKLFVGSLNKQATEKEVEEIFSPYGHVED 280
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY ++E ALAA+ A+NG +KM G PL V++AD ++ R
Sbjct: 281 VYLMRDEMKQSRGCGFVKYSSREMALAAINALNGIYKMRGCDQPLTVRFADPKRPR 336
>gi|356521753|ref|XP_003529516.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 737
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 146/251 (58%), Gaps = 16/251 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EAD+A+
Sbjct: 86 AKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIR 145
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K + EV +FS YG ++D
Sbjct: 146 ALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATVKEVEEIFSKYGRVED 205
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ++R ++ S+GC F+KY ++ ALAA+ A+NG + M G PL+V++AD ++ RQ
Sbjct: 206 VYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDS 265
Query: 192 AQKAQSQANNLPNAD---SQHPSLFGALPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQN 247
A P D ++HPS PMG PP N + + L + P N
Sbjct: 266 RGLAFGGPGFGPRFDAPGTRHPSNI-TDPMGDRMPPSNAW-------HPLHPPNMGPSSN 317
Query: 248 QPGFHGIIPPV 258
GFHG+ P+
Sbjct: 318 A-GFHGMGSPL 327
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 334 SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 393
S G GS ++G A LF+ +P+ ++++ F+ G V+ + DK TG +
Sbjct: 70 SGRGGGSPDHLDGGNFAKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQHQGC 129
Query: 394 GFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLK 426
F+ Y + A AI A+ N L G +Q++
Sbjct: 130 CFIKYATSEEADQAIRALHNQHTLPGGVGPIQVR 163
>gi|195435051|ref|XP_002065515.1| GK15495 [Drosophila willistoni]
gi|194161600|gb|EDW76501.1| GK15495 [Drosophila willistoni]
Length = 758
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 282 DNIKMFVGQIPKTWDETKLRRMFEQFGHVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 341
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 342 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 400
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 401 TVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 460
Query: 193 QK 194
Q+
Sbjct: 461 QQ 462
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 664 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 723
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 724 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 758
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 364 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQVGQ-SKGCAFVTFATK 421
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 422 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 460
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 332 TSSSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 388
TS+ S + P A+ +F+ IP+ + + +L F+ FG V + V DK T
Sbjct: 263 TSALDSANSNDLTKDQPDADNIKMFVGQIPKTWDETKLRRMFEQFGHVHTLNVLRDKVTS 322
Query: 389 VSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
+S+ FV+Y + +A A A+ N L G +Q+K + +N+
Sbjct: 323 ISRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 368
>gi|194861277|ref|XP_001969747.1| GG23780 [Drosophila erecta]
gi|190661614|gb|EDV58806.1| GG23780 [Drosophila erecta]
Length = 646
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 309 DNIKMFVGQIPKTWDETRLRQMFEQFGAVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 368
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 369 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 427
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 428 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 487
Query: 193 QK 194
Q+
Sbjct: 488 QQ 489
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 391 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 448
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 449 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 487
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 344 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 302 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGAVHTLNVLRDKVTSISRGCCFVTYYT 361
Query: 401 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
+A A A+ N L G +Q+K + +N+
Sbjct: 362 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 395
>gi|224112006|ref|XP_002316051.1| predicted protein [Populus trichocarpa]
gi|222865091|gb|EEF02222.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 150/270 (55%), Gaps = 41/270 (15%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EAD+A+ A
Sbjct: 89 KLFVGSVPRTATEMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCFIKYATSEEADRAIRA 148
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN++TLPG P+QV+YADGE ERL E+KLF+G L K +E EV +F+ YG ++D+
Sbjct: 149 LHNQRTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVEEIFTPYGRVEDV 208
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
++R + S+GC F+KY ++ ALAA+ +NG + M G PL V++AD ++ R
Sbjct: 209 YLMRDEMKQSRGCGFVKYSHRDMALAAINGLNGIYTMRGCEQPLTVRFADPKRPR----- 263
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP-GF 251
P DS+ FG+ P G +QASG R PP P G
Sbjct: 264 ----------PGGDSRGGPAFGS-------PGAGPRFQASG------LRPPPNLGDPMGD 300
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYA 281
H IPP NA SP NMGP + A
Sbjct: 301 H--IPP----NAWLPMSP---QNMGPSSNA 321
>gi|320167253|gb|EFW44152.1| RNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 461
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 134/215 (62%), Gaps = 8/215 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E VKLFVGQVP+ M E L +F+EF V E+ I+KD+ +GC F+ SR+ A A
Sbjct: 47 EHVKLFVGQVPRTMEEKDLRPVFEEFGPVVELTILKDRFNGLHKGCAFLTYASRESAQLA 106
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ A H + L G + PLQVK AD E + KLF+GM+ + SE E+ +F +YG I+D+
Sbjct: 107 MAALHGVRVLQGMAHPLQVKPADREEKAEARKLFLGMISRTASEDELRKVFEMYGDIEDI 166
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR TSKGCAF+KY +EQA+AA+ A++G+ M+G PL+VK+ADT++ER ++A
Sbjct: 167 AVLRQPDGTSKGCAFIKYRWREQAVAAISALHGRISMDGCPAPLIVKFADTDRERMQKKA 226
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
QK +L ++ H +GA MG NG+
Sbjct: 227 QK------HLMHSGHHHMGPYGA--MGGMAGMNGF 253
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 333 SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 392
S++ G+G G ++ LF+ +P+ +++L F+ FG V+ + D+ G+ K
Sbjct: 38 SAASGSGGGEHVK------LFVGQVPRTMEEKDLRPVFEEFGPVVELTILKDRFNGLHKG 91
Query: 393 FGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNK 433
F++Y S SAQ A+A ++G + L G +Q+K +++ K
Sbjct: 92 CAFLTYASRESAQLAMAALHGVRVLQGMAHPLQVKPADREEK 133
>gi|405963038|gb|EKC28647.1| CUG-BP- and ETR-3-like factor 2 [Crassostrea gigas]
Length = 647
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 125/190 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L MF+EF V ++N+++DK T S+GCCFV +R+ A A
Sbjct: 64 DAIKMFVGQIPRSMDENDLRKMFEEFGAVYQLNVLRDKATGQSKGCCFVTFYTRKAALDA 123
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT+ G P+Q+K AD E E KLF+GM+ K SE++V +F+ +G+I+D
Sbjct: 124 QNALHNIKTMSGMHHPIQMKPADSEKRNEERKLFVGMISKKCSESDVKMMFAPFGSIEDC 183
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR S+GCAF+ Y ++ AL A++ ++ MEG S P+VVK+ADT+KE++A++
Sbjct: 184 TILRDQNGQSRGCAFVTYANRQSALNAIKNMHHSQTMEGCSSPVVVKFADTQKEKEAKKL 243
Query: 193 QKAQSQANNL 202
Q+ N+
Sbjct: 244 QQINQNLWNI 253
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 73/96 (76%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEF DQ+L F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 552 AGKQTEGPDGANLFIYHLPQEFSDQDLMQTFIPFGTVISAKVFIDKQTNLSKCFGFVSYD 611
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+ SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 612 NALSAQAAIQAMNGFQIGMKRLKVQLKRPKSDSKPY 647
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 325 VANSNPSTSSSGGTGS---GGQIE----GPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 377
V S S+ S G G+ GQ++ P +F+ IP+ + +L F+ FG V
Sbjct: 34 VKKSRLSSYSDGEIGTRSMNGQVQKSEPDPDAIKMFVGQIPRSMDENDLRKMFEEFGAVY 93
Query: 378 SAKVFVDKATGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLK 426
V DKATG SK FV++ + +A +A A+ N + G +Q+K
Sbjct: 94 QLNVLRDKATGQSKGCCFVTFYTRKAALDAQNALHNIKTMSGMHHPIQMK 143
>gi|195035649|ref|XP_001989288.1| GH11645 [Drosophila grimshawi]
gi|193905288|gb|EDW04155.1| GH11645 [Drosophila grimshawi]
Length = 791
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 132/196 (67%), Gaps = 2/196 (1%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
AE K++ ++ +K+FVGQ+PK E +L +F++F V +N+++DK T SRGCCFV
Sbjct: 301 AELAKDQPDADN-IKMFVGQIPKTWDEIKLRCLFEQFGRVHTLNVLRDKVTSISRGCCFV 359
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSA 121
+R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V
Sbjct: 360 TYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQ 418
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A+++++ MEG S PLVVK+A
Sbjct: 419 LFAGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKSLHQSQTMEGCSAPLVVKFA 478
Query: 182 DTEKERQARRAQKAQS 197
DT+KE+ ++ Q+ Q+
Sbjct: 479 DTQKEKDQKKMQQLQA 494
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 697 GKQIEGPDGSNLFIYHLPQEFTDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 756
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 757 PHSANAAIQAMHGFQIGTKRLKVQLKRPRDSGKPY 791
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 410
+F+ IP+ + + +L F+ FGRV + V DK T +S+ FV+Y + +A A A+
Sbjct: 315 MFVGQIPKTWDEIKLRCLFEQFGRVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 374
Query: 411 MNGCQLGGKKLKVQLKRDNKQNK 433
N L G +Q+K + +N+
Sbjct: 375 HNIKTLDGMHHPIQMKPADSENR 397
>gi|3927998|emb|CAA77110.1| elav-type RNA-binding protein [Mus musculus]
Length = 484
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 203/439 (46%), Gaps = 52/439 (11%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEKRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGEL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATSTNANPL----SSTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 364
Query: 297 GLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYH 356
G+Q H PL + + V + Q EGP GANLFIYH
Sbjct: 365 GIQQYAQL------HCPLCTARACCNSRVLQAR-------------QKEGPEGANLFIYH 405
Query: 357 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416
+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+
Sbjct: 406 LPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQI 465
Query: 417 GGKKLKVQLKRDNKQNKPY 435
G K+LKVQLKR +KPY
Sbjct: 466 GMKRLKVQLKRSKNDSKPY 484
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
RR
Sbjct: 194 KRR 196
>gi|195148186|ref|XP_002015055.1| GL18624 [Drosophila persimilis]
gi|194107008|gb|EDW29051.1| GL18624 [Drosophila persimilis]
Length = 764
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 321 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 380
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 381 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 439
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A+++++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 440 TVLRDQAGQSKGCAFVTFATKQNAIGAIKSLHQSQTMEGCSAPLVVKFADTQKEKDQKKM 499
Query: 193 QK 194
Q+
Sbjct: 500 QQ 501
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 670 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 729
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 730 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 764
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 403 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 460
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ + H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 461 QNAIGAIKSLHQSQTMEGCSAPLVVKFADTQKEKDQKKM 499
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 338 TGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
T S ++ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+
Sbjct: 308 TNSNEMLKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCC 367
Query: 395 FVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
FV+Y + +A A A+ N L G +Q+K + +N+
Sbjct: 368 FVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 407
>gi|356565014|ref|XP_003550740.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 733
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ +E + +F+E V EV +IKDK T +GCCF+ + +EAD+A+
Sbjct: 86 AKLFVGSVPRTASEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIR 145
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K + EV +FS YG ++D
Sbjct: 146 ALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATVKEVEEIFSKYGRVED 205
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
+ ++R ++ S+GC F+KY ++ ALAA+ A+NG + M G PL+V++AD ++ RQ
Sbjct: 206 VYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQ 262
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 334 SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 393
S G GS +++G A LF+ +P+ ++++ F+ G V+ + DK TG +
Sbjct: 70 SGRGGGSPDRLDGGSFAKLFVGSVPRTASEEDIRPLFEEHGNVIEVALIKDKKTGQHQGC 129
Query: 394 GFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLK 426
F+ Y + A AI A+ N L G +Q++
Sbjct: 130 CFIKYATSEEADQAIRALHNQHTLPGGVGPIQVR 163
>gi|60459259|gb|AAX20016.1| FCA gamma [Pisum sativum]
Length = 743
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 146/260 (56%), Gaps = 36/260 (13%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKD+ T +GCCF+ + +EAD+A+
Sbjct: 91 AKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDRKTGQHQGCCFIKYATSEEADQAIR 150
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K EV +FS YG ++D
Sbjct: 151 ALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQALVKEVEEVFSKYGRVED 210
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ++R ++ S+GC F+KY ++ ALAA+ +NG + M G PL+V++AD ++ RQ
Sbjct: 211 VYLMRDDKKQSRGCGFVKYSHRDMALAAINGLNGIYTMRGCDQPLIVRFADPKRPRQ--- 267
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQ-ASGSYGLMQYRLPPMQ---- 246
DS+ P L A G+ P + G + S + M R+PP
Sbjct: 268 -------------GDSRGPVLGAA---GFGPRLDAPGTRLPSNNSDPMGDRMPPPNAWRP 311
Query: 247 -NQP--------GFHGIIPP 257
+QP GFHG+ PP
Sbjct: 312 IHQPNTGPSFNAGFHGMGPP 331
>gi|432858764|ref|XP_004068927.1| PREDICTED: CUGBP Elav-like family member 4-like [Oryzias latipes]
Length = 505
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 123/187 (65%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 48 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 107
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G+I++
Sbjct: 108 AQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEE 167
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 168 CTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRR 227
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 228 MQQMAGQ 234
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++P SA
Sbjct: 435 EGPEGCNLFIYHLPQEFGDGELMQMFLPFG--------------------FVSFDNPGSA 474
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 475 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 505
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 53 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNAL 112
>gi|321460482|gb|EFX71524.1| hypothetical protein DAPPUDRAFT_227924 [Daphnia pulex]
Length = 403
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 131/211 (62%), Gaps = 12/211 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L MF+++ V +VN+++DK + S+GCCFV R++A +A
Sbjct: 12 DAIKMFVGQIPRSMDENDLRKMFEDYGQVHQVNVLRDKISGQSKGCCFVTFYKRKDALQA 71
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N HN KTL G P+Q+K AD E R E KLF+GML K +SE +V +FS YG+I++
Sbjct: 72 QNDMHNIKTLSGMHHPIQMKPADSE-NRNERKLFVGMLSKKISENDVRIMFSAYGSIEEC 130
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR + S+GCAF+ + +++ A+ A++ ++ MEG S P+VVK+ADT+KE+ +R
Sbjct: 131 TVLRDNNNISRGCAFVTFTSRQSAVTAIKTVHHSQTMEGCSSPMVVKFADTQKEKDQKRV 190
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPP 223
S N L+G + + PP
Sbjct: 191 HHVGSTTN-----------LWGGIGINNLPP 210
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 73/93 (78%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G+NLFIYH+PQEFGD +L AF FG +LSAKVF+DK T +SKCFGFVSY++P
Sbjct: 311 QQEGPEGSNLFIYHLPQEFGDTDLCQAFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNPM 370
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 371 SSQAAIQAMNGFQIGTKRLKVQLKRSKDASKPY 403
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K ++E + MF + ++E +++D SRGC FV SR
Sbjct: 94 DSENRNER-KLFVGMLSKKISENDVRIMFSAYGSIEECTVLRDNNN-ISRGCAFVTFTSR 151
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ H+ +T+ G SSP+ VK+AD + E+ + ++
Sbjct: 152 QSAVTAIKTVHHSQTMEGCSSPMVVKFADTQKEKDQKRV 190
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS-YESPASAQ 405
P +F+ IP+ + +L F+ +G+V V DK +G SK FV+ Y+ + Q
Sbjct: 11 PDAIKMFVGQIPRSMDENDLRKMFEDYGQVHQVNVLRDKISGQSKGCCFVTFYKRKDALQ 70
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
M N L G +Q+K + +N+
Sbjct: 71 AQNDMHNIKTLSGMHHPIQMKPADSENR 98
>gi|348508140|ref|XP_003441613.1| PREDICTED: CUGBP Elav-like family member 4-like [Oreochromis
niloticus]
Length = 524
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 123/187 (65%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 48 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 107
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G+I++
Sbjct: 108 AQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEE 167
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 168 CTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRR 227
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 228 MQQMAGQ 234
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++P SA
Sbjct: 434 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 493
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 494 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 524
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 53 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNAL 112
>gi|42476252|ref|NP_571569.2| CUGBP Elav-like family member 3 [Danio rerio]
gi|152013393|sp|Q9IBD1.2|CELF3_DANRE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|38173873|gb|AAH60923.1| Trinucleotide repeat containing 4 [Danio rerio]
Length = 452
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E R + KLF+GML K +S+A+V +F +G+I++
Sbjct: 65 QNALHEQKTLPGMNRPIQVKPADSE-GRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+KY++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRM 183
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 184 QQVASQ 189
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 362 EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 421
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 422 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 452
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQNA+
Sbjct: 9 LFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNAL 68
>gi|7670536|dbj|BAA95118.1| Etr-1 [Danio rerio]
Length = 452
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E R + KLF+GML K +S+A+V +F +G+I++
Sbjct: 65 QNALHEQKTLPGMNRPIQVKPADSE-GRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+KY++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRM 183
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 184 QQVASQ 189
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 362 EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 421
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 422 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 452
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQNA+
Sbjct: 9 LFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNAL 68
>gi|449462184|ref|XP_004148821.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449511891|ref|XP_004164081.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 675
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 115/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCFV + +EAD+A+
Sbjct: 52 AKLFVGSVPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIR 111
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
HN+ TLPG P+QV+YADGE ERL E+KLF+G L K SE EV +FS YG ++D
Sbjct: 112 NLHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVED 171
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY ++ ALAA+ A+NG M G PL V++AD +K R
Sbjct: 172 VYLMRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPR 227
>gi|348527714|ref|XP_003451364.1| PREDICTED: CUGBP Elav-like family member 5-like [Oreochromis
niloticus]
Length = 529
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 137/228 (60%), Gaps = 17/228 (7%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 285
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 439 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 498
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 499 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 529
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 398
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
ES AQNA+ L G +Q+K + +++
Sbjct: 130 ESAIKAQNALHEQK--TLPGMTRPIQVKPADSESR 162
>gi|410921162|ref|XP_003974052.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Takifugu
rubripes]
Length = 528
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 137/228 (60%), Gaps = 17/228 (7%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 285
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 438 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 497
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 498 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 528
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 398
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
ES AQNA+ L G +Q+K + +++
Sbjct: 130 ESAIKAQNALHEQK--TLPGMTRPIQVKPADSESR 162
>gi|363744106|ref|XP_003642975.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 445
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 315 NNSPGSVSPAVANSNPSTSS-------SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|395822988|ref|XP_003784783.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Otolemur
garnettii]
Length = 448
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|443691317|gb|ELT93212.1| hypothetical protein CAPTEDRAFT_183838 [Capitella teleta]
Length = 462
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 120/182 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 15 DAIKLFVGQIPRNLEEKDLRPIFEEFGQIYELTVLKDRFTGMHKGCAFLTYCARDSALKA 74
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE EV +FS YG+I++
Sbjct: 75 QQALHEQKTLPGMNRPIQVKPADSESRAEDRKLFVGMLNKQQSEEEVRQMFSPYGSIEEC 134
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR SKGCAF+K+ T A AA+ A++G M G+S LVVK+ADTEKERQ R+
Sbjct: 135 TILRDQNGNSKGCAFVKFTTHADAQAAINALHGSQTMPGASSSLVVKFADTEKERQLRKM 194
Query: 193 QK 194
Q+
Sbjct: 195 QQ 196
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 73/96 (76%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+ Q EGP G NLFIYH+PQEFGD EL F FG V+SAKV++D+AT SKCFGFVS++
Sbjct: 367 TTAQKEGPEGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYIDRATNQSKCFGFVSFD 426
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 427 NPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E ++ MF + ++E I++D+ S+GC FV +
Sbjct: 97 DSESRAEDRKLFVGMLNKQQSEEEVRQMFSPYGSIEECTILRDQNGN-SKGCAFVKFTTH 155
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+NA H +T+PGASS L VK+AD E ER K+
Sbjct: 156 ADAQAAINALHGSQTMPGASSSLVVKFADTEKERQLRKM 194
>gi|363744110|ref|XP_003642977.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 465
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 315 NNSPGSVSPAVANSNPSTSS-------SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|363744101|ref|XP_003642973.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 472
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 315 NNSPGSVSPAVANSNPSTSS-------SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|207028397|ref|NP_001128708.1| CUGBP, Elav-like family member 4 [Xenopus laevis]
gi|197359136|gb|ACH69784.1| RNA binding protein Bruno-like 4 [Xenopus laevis]
Length = 471
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 401 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 440
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 441 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 471
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 315 NNSPGSVSPAVANSNPSTS---------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQE 365
N P + S V SNPS++ S GG S ++ LFI IP+ +++
Sbjct: 10 NGQPDNSSLTV--SNPSSNGHMNGLNHHSPGGAASTIPMKDHDAIKLFIGQIPRNLDEKD 67
Query: 366 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 68 LKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|195546832|ref|NP_001124260.1| CUGBP Elav-like family member 5 [Danio rerio]
gi|190339155|gb|AAI63416.1| Brunol5 protein [Danio rerio]
Length = 528
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 137/228 (60%), Gaps = 17/228 (7%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
Q+ Q FG A P++ Y ++ ++ LMQ
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---STYAHALMQ 285
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 438 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 497
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 498 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 528
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 398
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GTMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
ES AQNA+ L G +Q+K + +++
Sbjct: 130 ESAIKAQNALHEQK--TLPGMTRPIQVKPADSESR 162
>gi|75075903|sp|Q4R535.1|CELF4_MACFA RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|67970896|dbj|BAE01790.1| unnamed protein product [Macaca fascicularis]
Length = 474
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|332849799|ref|XP_512100.3| PREDICTED: CUGBP, Elav-like family member 4 [Pan troglodytes]
gi|194379036|dbj|BAG58069.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|348529973|ref|XP_003452486.1| PREDICTED: CUGBP Elav-like family member 3-like [Oreochromis
niloticus]
Length = 453
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 127/186 (68%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E + KLF+GML K ++A+V +F +G+I++
Sbjct: 65 QNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+AD+EKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADSEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 363 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 422
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 423 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 453
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+A + MF+ F ++E +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 SNAEAQAAINALHGSRTLPGASSSLVVKFADSEKER 179
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 401 PASAQNAI 408
AQNA+
Sbjct: 61 ALKAQNAL 68
>gi|395510718|ref|XP_003759619.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 453
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 49 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHVEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG
Sbjct: 403 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG 452
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 18/100 (18%)
Query: 327 NSNPSTSSSGGTGSGGQIEG---PPG------------ANLFIYHIPQEFGDQELGNAFQ 371
N++ S +S G GS G + G PG LFI IP+ +++L F+
Sbjct: 15 NTSLSNNSHGSPGSNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFE 74
Query: 372 AFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 75 EFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 114
>gi|149944693|ref|NP_001092538.1| CUGBP Elav-like family member 4 [Bos taurus]
gi|148878073|gb|AAI46143.1| BRUNOL4 protein [Bos taurus]
gi|296473867|tpg|DAA15982.1| TPA: CUG-BP- and ETR-3-like factor 4 [Bos taurus]
Length = 475
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|50540190|ref|NP_001002562.1| CUGBP Elav-like family member 4 [Danio rerio]
gi|82235921|sp|Q6DGV1.1|CELF4_DANRE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|49904554|gb|AAH76238.1| Zgc:92761 [Danio rerio]
Length = 520
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 121/187 (64%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 44 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 103
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A A H +KTLPG + P+QVK AD E + KLF+GML K E +V LF +G+I++
Sbjct: 104 AQTALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEE 163
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY T +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 164 CTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRR 223
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 224 MQQMAGQ 230
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++P SA
Sbjct: 430 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 489
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 490 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 520
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ A+
Sbjct: 49 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTAL 108
>gi|183637597|gb|ACC64599.1| trinucleotide repeat containing 4 (predicted) [Rhinolophus
ferrumequinum]
Length = 459
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 369 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 428
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 429 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 459
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|351702706|gb|EHB05625.1| CUG-BP- and ETR-3-like factor 3 [Heterocephalus glaber]
Length = 381
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 388 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
G+ GFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 334 GMQHYTGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 381
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|380792869|gb|AFE68310.1| CUGBP Elav-like family member 3 isoform 1, partial [Macaca mulatta]
Length = 368
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|9246977|gb|AAF86232.1|AF248650_1 RNA-binding protein BRUNOL4 [Homo sapiens]
Length = 294
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 322 SPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 381
SP A S S G S ++ LFI IP+ +++L F+ FG++ V
Sbjct: 26 SPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTV 85
Query: 382 FVDKATGVSKCFGFVSY---ESPASAQNAI 408
D+ TG+ K F++Y ES AQ+A+
Sbjct: 86 LKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|363744108|ref|XP_003642976.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 454
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q +GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PA
Sbjct: 362 QRDGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPA 421
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 422 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 315 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|301767880|ref|XP_002919375.1| PREDICTED: CUGBP Elav-like family member 3-like [Ailuropoda
melanoleuca]
Length = 461
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 372 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 431
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 461
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|410968366|ref|XP_003990678.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Felis catus]
Length = 463
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 373 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 432
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 433 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 463
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|359477208|ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
Length = 785
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EA++A+
Sbjct: 118 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K +E EV +FS YG ++D
Sbjct: 178 ALHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+K+ ++ A+AA+ A+NG + M G PL V++AD ++ R
Sbjct: 238 VYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRFADPKRPR 293
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 408
A LF+ +P+ ++++ F+ G VL + DK TG + F+ Y + A+ AI
Sbjct: 118 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 177
Query: 409 AMMNGCQLGGKKLKVQLK 426
A+ N L G +Q++
Sbjct: 178 ALHNQYTLPGGVGPIQVR 195
>gi|116003913|ref|NP_001070313.1| CUGBP Elav-like family member 3 [Bos taurus]
gi|122132428|sp|Q08E07.1|CELF3_BOVIN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|115305254|gb|AAI23481.1| Trinucleotide repeat containing 4 [Bos taurus]
gi|296489556|tpg|DAA31669.1| TPA: CUG-BP- and ETR-3-like factor 3 [Bos taurus]
Length = 461
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 371 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 430
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 431 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 461
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|25807801|gb|AAN73884.1| CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 465
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|12746392|gb|AAK07474.1|AF329264_1 CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 462
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 372 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 431
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|148706793|gb|EDL38740.1| trinucleotide repeat containing 4, isoform CRA_f [Mus musculus]
Length = 466
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 376 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 435
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 436 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 466
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|332220299|ref|XP_003259294.1| PREDICTED: CUGBP Elav-like family member 3 [Nomascus leucogenys]
Length = 467
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 377 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 436
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 437 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 467
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|395855962|ref|XP_003800412.1| PREDICTED: CUGBP Elav-like family member 3 [Otolemur garnettii]
Length = 475
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 385 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 444
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 445 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 475
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|71297206|gb|AAH52491.1| Trinucleotide repeat containing 4 [Homo sapiens]
Length = 464
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAKAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAKAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|359321739|ref|XP_003639689.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Canis
lupus familiaris]
Length = 462
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 372 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 431
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|71164894|ref|NP_009116.3| CUGBP Elav-like family member 3 isoform 1 [Homo sapiens]
gi|149751259|ref|XP_001492746.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Equus
caballus]
gi|74756184|sp|Q5SZQ8.1|CELF3_HUMAN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName: Full=CAG
repeat protein 4; AltName: Full=CUG-BP- and ETR-3-like
factor 3; AltName: Full=ELAV-type RNA-binding protein 1;
Short=ETR-1; AltName: Full=Expanded repeat domain
protein CAG/CTG 4; AltName: Full=RNA-binding protein
BRUNOL-1; AltName: Full=Trinucleotide repeat-containing
gene 4 protein
gi|85397642|gb|AAI04759.1| Trinucleotide repeat containing 4 [Homo sapiens]
gi|119573806|gb|EAW53421.1| trinucleotide repeat containing 4, isoform CRA_c [Homo sapiens]
gi|168278104|dbj|BAG11030.1| trinucleotide repeat-containing 4 protein [synthetic construct]
Length = 465
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|355558428|gb|EHH15208.1| hypothetical protein EGK_01267 [Macaca mulatta]
Length = 469
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 379 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 438
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 439 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 469
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|348586638|ref|XP_003479075.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Cavia
porcellus]
Length = 463
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 373 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 432
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 433 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 463
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|350583381|ref|XP_003481499.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Sus scrofa]
gi|397492758|ref|XP_003817287.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Pan paniscus]
gi|426331463|ref|XP_004026700.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gorilla
gorilla gorilla]
Length = 464
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|284005526|ref|NP_001164779.1| CUGBP Elav-like family member 3 [Oryctolagus cuniculus]
gi|217030863|gb|ACJ74025.1| trinucleotide repeat containing 4 (predicted) [Oryctolagus
cuniculus]
Length = 466
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 376 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 435
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 436 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 466
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|281182934|ref|NP_001162429.1| CUGBP Elav-like family member 3 [Papio anubis]
gi|163781027|gb|ABY40803.1| trinucleotide repeat containing 4 (predicted) [Papio anubis]
Length = 471
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 381 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 440
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 441 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 471
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|157821951|ref|NP_001102660.1| CUG-BP- and ETR-3-like factor 3 [Rattus norvegicus]
gi|149030747|gb|EDL85784.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 473
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 383 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 442
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 443 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 473
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|354503685|ref|XP_003513911.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Cricetulus
griseus]
Length = 491
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 401 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 460
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|348526886|ref|XP_003450950.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1
[Oreochromis niloticus]
Length = 458
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 12/215 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K S+ +V LF +G+I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ SQ +F + + + P YN Y
Sbjct: 185 QQVASQLG-----------IFSPMTLNF-PAYNAY 207
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 368 EGPEGCNIFIYHLPQEFSDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 427
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 428 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQ+A+
Sbjct: 9 LFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSAL 68
>gi|35505365|gb|AAH57553.1| Tnrc4 protein [Mus musculus]
Length = 494
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 404 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 463
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 464 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 494
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|148706790|gb|EDL38737.1| trinucleotide repeat containing 4, isoform CRA_c [Mus musculus]
Length = 567
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 78 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 137
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 138 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 197
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 198 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 257
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 258 QQVATQ 263
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 477 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 536
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 537 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 567
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 160 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 216
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 217 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 252
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 328 SNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 387
S+P + + G + ++ P LF+ IP+ +++L F+ FGR+ V DK T
Sbjct: 58 SSPCSPTPGPSSWAAPMKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYT 117
Query: 388 GVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
G+ K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 118 GLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 164
>gi|126313728|ref|XP_001366642.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Monodelphis
domestica]
Length = 458
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 368 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 427
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 428 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|403302658|ref|XP_003941971.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403302660|ref|XP_003941972.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 464
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|432853507|ref|XP_004067741.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Oryzias
latipes]
Length = 529
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 136/228 (59%), Gaps = 17/228 (7%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 74 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 133
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 134 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 193
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 194 CTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQTMPGASSSLVVKFADTDKERTIRR 253
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 254 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 284
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 439 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 498
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 499 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 529
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 79 LFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNAL 138
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNK 433
L G +Q+K + +++
Sbjct: 139 HEQK--TLPGMTRPIQVKPADSESR 161
>gi|296228815|ref|XP_002759970.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Callithrix
jacchus]
Length = 465
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|2204091|emb|CAB05389.1| FCA delta [Arabidopsis thaliana]
Length = 533
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|334302803|sp|O04425.2|FCA_ARATH RecName: Full=Flowering time control protein FCA
gi|2244986|emb|CAB10407.1| FCA gamma protein [Arabidopsis thaliana]
gi|7268377|emb|CAB78670.1| FCA gamma protein [Arabidopsis thaliana]
Length = 747
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|426218925|ref|XP_004003685.1| PREDICTED: CUGBP Elav-like family member 3 [Ovis aries]
Length = 449
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 359 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 418
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 419 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 449
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|2204095|emb|CAB05391.1| FCA gamma [Arabidopsis thaliana]
Length = 747
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|296083224|emb|CBI22860.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 117/175 (66%), Gaps = 3/175 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EA++A+ A
Sbjct: 42 KLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRA 101
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN+ TLPG P+QV+YADGE ERL E+KLF+G L K +E EV +FS YG ++D+
Sbjct: 102 LHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVEDV 161
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
++R + S+GC F+K+ ++ A+AA+ A+NG + M G PL V++AD ++ R
Sbjct: 162 YLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRFADPKRPR 216
>gi|27369577|ref|NP_766022.1| CUGBP Elav-like family member 3 [Mus musculus]
gi|81914478|sp|Q8CIN6.1|CELF3_MOUSE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|25807803|gb|AAN73885.1| CUG-BP and ETR-3 like factor 3 [Mus musculus]
Length = 465
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 183
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 184 QQVATQ 189
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|186511879|ref|NP_849543.2| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658325|gb|AEE83725.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 747
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|354503687|ref|XP_003513912.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Cricetulus
griseus]
Length = 462
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 183
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 184 QQVATQ 189
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 372 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 431
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|186511881|ref|NP_193363.4| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658326|gb|AEE83726.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 533
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|2204096|emb|CAB05392.1| FCA delta [Arabidopsis thaliana]
gi|5302786|emb|CAB46035.1| FCA delta protein [Arabidopsis thaliana]
gi|7268378|emb|CAB78671.1| FCA delta protein [Arabidopsis thaliana]
Length = 533
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|293333224|ref|NP_001169298.1| uncharacterized protein LOC100383162 [Zea mays]
gi|224028499|gb|ACN33325.1| unknown [Zea mays]
gi|414588978|tpg|DAA39549.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 735
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++ S VKLFVG VP+ TE + +F+E V EV +IKD+ T +GCCFV +
Sbjct: 113 QDHDSRSNYVKLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYAT 172
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSAL 122
+EA++A+ HN TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +
Sbjct: 173 SEEAERAIRGLHNHYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATPKEIEEI 232
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F+ YG ++D+ I+R S + S+GC F+K+ +KE A+ A+ A++G + M G PL++++AD
Sbjct: 233 FAPYGHVEDVYIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTMRGCEQPLIIRFAD 292
Query: 183 TEKER 187
++ R
Sbjct: 293 PKRPR 297
>gi|2204089|emb|CAB05388.1| FCA gamma [Arabidopsis thaliana]
gi|57169178|gb|AAW38964.1| FCA [Arabidopsis thaliana]
Length = 747
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|33390912|gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [Oryza sativa Indica
Group]
gi|47496990|dbj|BAD20100.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
gi|50261763|gb|AAT72462.1| FCA gamma protein [Oryza sativa Japonica Group]
gi|58003966|gb|AAW62371.1| FCA [Oryza sativa Japonica Group]
Length = 738
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 182 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 297
>gi|219520290|gb|AAI43227.1| TNRC4 protein [Homo sapiens]
Length = 464
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 183
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 184 QQVATQ 189
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|297800520|ref|XP_002868144.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313980|gb|EFH44403.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 127 VKLFVGSVPRTAIEEEVRPFFEKHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 186
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 187 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGRVED 246
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++AD ++ +
Sbjct: 247 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPK 302
>gi|395535951|ref|XP_003769984.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Sarcophilus
harrisii]
Length = 458
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 368 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 427
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 428 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|414588979|tpg|DAA39550.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 708
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++ S VKLFVG VP+ TE + +F+E V EV +IKD+ T +GCCFV +
Sbjct: 113 QDHDSRSNYVKLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYAT 172
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSAL 122
+EA++A+ HN TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +
Sbjct: 173 SEEAERAIRGLHNHYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATPKEIEEI 232
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F+ YG ++D+ I+R S + S+GC F+K+ +KE A+ A+ A++G + M G PL++++AD
Sbjct: 233 FAPYGHVEDVYIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTMRGCEQPLIIRFAD 292
Query: 183 TEKER 187
++ R
Sbjct: 293 PKRPR 297
>gi|148706791|gb|EDL38738.1| trinucleotide repeat containing 4, isoform CRA_d [Mus musculus]
Length = 538
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 78 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 137
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 138 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 196
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 197 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 256
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 257 QQVATQ 262
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 448 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 507
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 508 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 538
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 328 SNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 387
S+P + + G + ++ P LF+ IP+ +++L F+ FGR+ V DK T
Sbjct: 58 SSPCSPTPGPSSWAAPMKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYT 117
Query: 388 GVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
G+ K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 118 GLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 164
>gi|147905119|ref|NP_001080695.1| CUGBP Elav-like family member 3-B [Xenopus laevis]
gi|82241483|sp|Q7ZWM3.1|CEL3B_XENLA RecName: Full=CUGBP Elav-like family member 3-B; Short=CELF3-B;
AltName: Full=Bruno-like protein 1-B; AltName:
Full=CUG-BP- and ETR-3-like factor 3-B; AltName:
Full=ELAV-type RNA-binding protein 1-B; Short=ETR-1-B;
AltName: Full=RNA-binding protein BRUNOL-1-B; AltName:
Full=Trinucleotide repeat-containing gene 4 protein B
gi|28422663|gb|AAH46942.1| Tnrc4-prov protein [Xenopus laevis]
Length = 462
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 124/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVANQ 190
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 319 GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 378
G VSPA P+ + Q EGP G N+FIYH+PQEF D E+ F FG V+S
Sbjct: 347 GLVSPAFTQP-PAILTQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVIS 405
Query: 379 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 406 AKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 403
P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALK 63
Query: 404 AQNAI 408
AQ+A+
Sbjct: 64 AQSAL 68
>gi|332658328|gb|AEE83728.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 672
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 45 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 104
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 105 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 164
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 165 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 220
>gi|218201679|gb|EEC84106.1| hypothetical protein OsI_30426 [Oryza sativa Indica Group]
Length = 758
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 182 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 297
>gi|115478012|ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group]
gi|34555646|gb|AAQ74971.1| flowering time control protein isoform OsFCA-3 [Oryza sativa Indica
Group]
gi|113630834|dbj|BAF24515.1| Os09g0123200 [Oryza sativa Japonica Group]
Length = 637
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 21 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 80
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 81 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 140
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 141 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 196
>gi|34555650|gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [Oryza sativa Indica
Group]
Length = 626
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 21 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 80
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 81 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 140
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 141 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 196
>gi|410950073|ref|XP_004001486.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Felis catus]
Length = 479
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 184/379 (48%), Gaps = 64/379 (16%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 22 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 81
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 82 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 141
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VVK+ADT+KER RR Q+ Q L PSL LP PY+ Y +
Sbjct: 142 VVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQA 184
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYP 293
LMQ + + + + P V +S N P P SG G
Sbjct: 185 LMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGST 242
Query: 294 AVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTS---- 333
AVPGL P+ P+PG GH L + G V SP VA + +P+ S
Sbjct: 243 AVPGLVAPITNGFAGVVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQ 299
Query: 334 ------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELGNAFQAFGR 375
++ T + EGP G NLFIYH+PQE GD EL F FG
Sbjct: 300 YTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEXGDTELTQMFLPFGN 359
Query: 376 VLSAKVFVDKATGVSKCFG 394
++S+KVF+D+AT SKCF
Sbjct: 360 IISSKVFMDRATNQSKCFA 378
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 58 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 115
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 116 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 157
>gi|168017537|ref|XP_001761304.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687644|gb|EDQ74026.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 110/159 (69%), Gaps = 3/159 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ +TE ++ MF E V EV IIKDK T +GCCFV + +EAD+A+
Sbjct: 2 VKLFVGSVPRTITEDEVRPMFAEHGNVIEVAIIKDKRTGNQQGCCFVKYSTVEEADRAIR 61
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+KTLPG +P+QV+YADGE ERL EHKLF+G L K SE E+ LF YG + D
Sbjct: 62 ALHNQKTLPGGVAPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELFLPYGRVDD 121
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
+ I+R Q+ S+GCAF+KY ++ A AA+ A+NG H M+
Sbjct: 122 VYIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIMQ 160
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+ ++E EV +F+ +G + ++ I++ + +GC F+KY T E+A A+ A
Sbjct: 3 KLFVGSVPRTITEDEVRPMFAEHGNVIEVAIIKDKRTGNQQGCCFVKYSTVEEADRAIRA 62
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
++ + + G P+ V++AD E+ER
Sbjct: 63 LHNQKTLPGGVAPVQVRYADGERER 87
>gi|391337388|ref|XP_003743051.1| PREDICTED: CUGBP Elav-like family member 2-like [Metaseiulus
occidentalis]
Length = 512
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+K+FVGQ+P++ E +L +F+EF V +N+++DK T SRGCCFV +R+ A A N
Sbjct: 58 IKMFVGQIPRNWDENELRNLFEEFGKVHSINVLRDKATGNSRGCCFVTFYTRKSALDAQN 117
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
HN KTLPG P+Q+K AD E R E KLFIGML K E++V +FS +GTI++ +
Sbjct: 118 DLHNIKTLPGMHHPIQMKPADSE-NRNERKLFIGMLSKECDESDVRLMFSSFGTIEECTV 176
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
LR Q SKGCAF+ Y T++ A+ A++++N M+G S PLVVK+ADT
Sbjct: 177 LRDGQGQSKGCAFVTYSTRQCAINAIKSMNHSQTMKGCSNPLVVKFADT 225
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 74/96 (77%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G QIEGP GANLFIYH+PQEF D +L AF FG+V+SAKVF+DK T +SKCFGFVSY
Sbjct: 417 AGKQIEGPDGANLFIYHLPQEFADIDLVQAFMPFGQVISAKVFIDKQTNLSKCFGFVSYA 476
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SP SAQ AI MNG Q+G K+LKVQLKR Q PY
Sbjct: 477 SPVSAQAAIQSMNGFQIGAKRLKVQLKRSKDQGTPY 512
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLF+G + K E+ + MF F ++E +++D + S+GC FV +R
Sbjct: 138 DSENRNER-KLFIGMLSKECDESDVRLMFSSFGTIEECTVLRDGQGQ-SKGCAFVTYSTR 195
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYAD 95
Q A A+ + ++ +T+ G S+PL VK+AD
Sbjct: 196 QCAINAIKSMNHSQTMKGCSNPLVVKFAD 224
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
+F+ IP+ + + EL N F+ FG+V S V DKATG S+ FV++ + SA +A +
Sbjct: 60 MFVGQIPRNWDENELRNLFEEFGKVHSINVLRDKATGNSRGCCFVTFYTRKSALDAQNDL 119
Query: 412 NGCQ-LGGKKLKVQLKRDNKQNK 433
+ + L G +Q+K + +N+
Sbjct: 120 HNIKTLPGMHHPIQMKPADSENR 142
>gi|34555648|gb|AAQ74972.1| flowering time control protein isoform OsFCA-2 [Oryza sativa Indica
Group]
Length = 649
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 182 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 297
>gi|149030745|gb|EDL85782.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 284
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 403
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 404 AQNAI 408
AQ+A+
Sbjct: 64 AQSAL 68
>gi|334314036|ref|XP_003339980.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Monodelphis
domestica]
Length = 464
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 49 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ ++ +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERTLR 228
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 229 RMHQMAGQ 236
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 375 GPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASAQ 434
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y +S AQ+A+
Sbjct: 55 LFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSAL 114
>gi|18150431|gb|AAL61622.1|AF414188_1 FCA gamma [Brassica napus]
Length = 715
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV IKDK T +GCCFV + ++AD+A+
Sbjct: 102 VKLFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIR 161
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + +QV+YADGE ER+ E KLF+G L K +E EV LF +G ++D
Sbjct: 162 ALHNQITLPGGTGLVQVRYADGERERIGAVEFKLFVGSLNKQATENEVEELFLQFGRVED 221
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++AD ++ +
Sbjct: 222 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPK 277
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ ++E+ F+ G VL DK TG + FV Y + A AI A+
Sbjct: 104 LFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIRAL 163
Query: 411 MNGCQLGGKKLKVQLK 426
N L G VQ++
Sbjct: 164 HNQITLPGGTGLVQVR 179
>gi|126272943|ref|XP_001371226.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Monodelphis
domestica]
Length = 491
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 49 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ ++ +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERTLR 228
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 229 RMHQMAGQ 236
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 401 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASA 460
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y +S AQ+A+
Sbjct: 55 LFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSAL 114
>gi|334314038|ref|XP_003339981.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Monodelphis
domestica]
Length = 470
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 49 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ ++ +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERTLR 228
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 229 RMHQMAGQ 236
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 380 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASA 439
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 440 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 470
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y +S AQ+A+
Sbjct: 55 LFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSAL 114
>gi|11045077|emb|CAB41488.2| putative FCA orthologue [Brassica napus]
Length = 384
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV IKDK T +GCCFV + ++AD+A+
Sbjct: 105 VKLFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIR 164
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + +QV+YADGE ER+ E KLF+G L K +E EV LF +G ++D
Sbjct: 165 ALHNQITLPGGTGLVQVRYADGERERIGAVEFKLFVGSLNKQATENEVEELFLQFGRVED 224
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++AD ++ +
Sbjct: 225 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPK 280
>gi|363737471|ref|XP_425051.3| PREDICTED: CUGBP Elav-like family member 3 [Gallus gallus]
Length = 445
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E+ L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 3 DHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIE 122
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 123 ECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLR 182
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 183 RMHQMAGQ 190
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 355 EGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 414
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 415 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 445
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ + +L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 9 LFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSAL 68
>gi|145306688|gb|ABP57108.1| CUG-BP and ETR-3-like factor 6 [Gallus gallus]
Length = 445
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 121/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E+ L +F+EF + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 125 TILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRM 184
Query: 193 QKAQSQ 198
+ Q
Sbjct: 185 HQMAGQ 190
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 355 EGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 414
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 415 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 445
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ + +L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 9 LFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSAL 68
>gi|363742943|ref|XP_003642748.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gallus
gallus]
Length = 464
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 12/224 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
Q+ SQ Q FGA Y+ Y G++G
Sbjct: 185 QQVASQLGMFSPIALQ----FGA--------YSAYTQAVGGTWG 216
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPEGCNIFIYHLPQEFADTEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIHAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K + + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+ A H +TLPGASS L VK+AD E ER
Sbjct: 144 SHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|363742939|ref|XP_003642747.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gallus
gallus]
Length = 451
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 125/186 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K + + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+ A H +TLPGASS L VK+AD E ER
Sbjct: 144 SHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|291327533|ref|NP_001167545.1| CUGBP Elav-like family member 4 isoform F [Mus musculus]
gi|26341974|dbj|BAC34649.1| unnamed protein product [Mus musculus]
Length = 456
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 121/197 (61%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRR 170
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 171 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 230
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 231 DTDKERTMRRMQQMAGQ 247
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|226371661|ref|NP_001139765.1| CUGBP Elav-like family member 4 isoform B [Mus musculus]
gi|30931371|gb|AAH52744.1| Bruno-like 4, RNA binding protein (Drosophila) [Mus musculus]
Length = 485
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|148664595|gb|EDK97011.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 463
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 121/197 (61%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 57 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 116
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 117 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRR 176
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 177 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 236
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 237 DTDKERTMRRMQQMAGQ 253
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 62 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 121
>gi|387542962|gb|AFJ72108.1| CUGBP Elav-like family member 4 isoform 1 [Macaca mulatta]
Length = 486
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAI 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQTALHEQKTLPGMARPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 410
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y + SA A A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAIKAQTAL 115
Query: 411 MNGCQLGGKKLKVQLKRDNKQNK 433
L G +Q+K + +++
Sbjct: 116 HEQKTLPGMARPIQVKPADSESR 138
>gi|148664597|gb|EDK97013.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Mus
musculus]
Length = 491
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 56 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 116 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 175
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 176 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 235
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 236 ADTDKERTMRRMQQMAGQ 253
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 62 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 121
>gi|326674562|ref|XP_002664812.2| PREDICTED: CUGBP Elav-like family member 3-like [Danio rerio]
Length = 442
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 124/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+++ + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARESAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K S+ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRKIFEPFGGIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A +A+ +++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHSEAQSAINSLHGSRTLPGASSSLVVKFADTEKERGVRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVTSQ 190
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PA
Sbjct: 350 QREGPEGCNVFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPA 409
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 410 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 442
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LFI IP+ +++L F+ +G++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 401 PASAQNAI 408
AQ+A+
Sbjct: 61 AIKAQSAL 68
>gi|189339278|ref|NP_795928.2| CUG-BP- and ETR-3-like factor 5 [Mus musculus]
Length = 395
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 157/310 (50%), Gaps = 45/310 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 65 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 124
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 125 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 184
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSYGLMQYR 241
Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 185 MQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVA 233
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGL 298
PP + Q A +S N P P SG G AVPGL
Sbjct: 234 FPPCH-----------IQQIGA-------VSLNGLPATPIAPASGLHSPPLLGTAAVPGL 275
Query: 299 QYPMP--YPG 306
P+P +PG
Sbjct: 276 MAPIPNGFPG 285
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 409
LF+ IP+ +Q+L F+ FGR+ V D TGV K F++Y + SA A A
Sbjct: 8 KLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTA 67
Query: 410 MMNGCQLGGKKLKVQLKRDNKQNK 433
+ L G +Q+K + +++
Sbjct: 68 LHEQKTLPGMARPIQVKPADSESR 91
>gi|62087714|dbj|BAD92304.1| bruno-like 5, RNA binding protein variant [Homo sapiens]
Length = 421
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 55 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 114
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 115 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 174
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 175 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 234
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 235 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 259
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 334 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 38 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 97
Query: 391 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 98 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 141
>gi|13123778|ref|NP_064565.1| CUGBP Elav-like family member 4 isoform 1 [Homo sapiens]
gi|397520308|ref|XP_003830262.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Pan paniscus]
gi|403265036|ref|XP_003924762.1| PREDICTED: CUGBP Elav-like family member 4 [Saimiri boliviensis
boliviensis]
gi|426385818|ref|XP_004059398.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Gorilla
gorilla gorilla]
gi|74761348|sp|Q9BZC1.1|CELF4_HUMAN RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|152013395|sp|Q5NVC8.2|CELF4_PONAB RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|12746394|gb|AAK07475.1|AF329265_1 CUG-BP and ETR-3 like factor 4 [Homo sapiens]
gi|119621802|gb|EAX01397.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Homo
sapiens]
Length = 486
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|152013394|sp|Q7TSY6.2|CELF4_MOUSE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
Length = 486
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|291394300|ref|XP_002713553.1| PREDICTED: bruno-like 4, RNA binding protein-like [Oryctolagus
cuniculus]
Length = 485
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCPRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 415 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 454
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 455 QTAIQAMNGFQIGMKRLKVQLKRPKDTNRPY 485
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 327 NSNPSTSSSGGT-GSGGQIEG---PPG------------ANLFIYHIPQEFGDQELGNAF 370
N++ ST+ GG+ GS G + G PG LFI IP+ +++L F
Sbjct: 15 NASLSTNGLGGSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 74
Query: 371 QAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|344269050|ref|XP_003406368.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 2
[Loxodonta africana]
Length = 486
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 320 SVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 379
S SP A S S G S ++ LFI IP+ +++L F+ FG++
Sbjct: 24 SSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYEL 83
Query: 380 KVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
V D+ TG+ K F++Y ES AQ+A+
Sbjct: 84 TVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|283838931|gb|ADB44797.1| FCA [Vitis vinifera]
Length = 281
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 117/175 (66%), Gaps = 3/175 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EA++A+ A
Sbjct: 103 KLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRA 162
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN+ TLPG P++V+YADGE ERL E+KLF+G L K +E EV +FS YG ++D+
Sbjct: 163 LHNQYTLPGGVGPIEVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVEDV 222
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
++R + S+GC F+ + ++ A+AA+ A+NG + M+G PL V++AD ++ R
Sbjct: 223 YLMRDELKQSRGCGFVNFSHRDMAMAAINALNGIYTMKGCDQPLTVRFADPKRPR 277
>gi|395822986|ref|XP_003784782.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Otolemur
garnettii]
Length = 486
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|187761299|ref|NP_001020258.1| CUGBP Elav-like family member 4 isoform 2 [Homo sapiens]
Length = 485
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 415 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 454
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 455 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 485
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|348500286|ref|XP_003437704.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Oreochromis
niloticus]
Length = 481
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 391 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 450
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 451 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|432852720|ref|XP_004067351.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Oryzias latipes]
Length = 481
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 391 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 450
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 451 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|289547698|ref|NP_001166144.1| CUGBP Elav-like family member 5 isoform 2 [Homo sapiens]
Length = 409
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 247
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 334 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 391 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>gi|118103587|ref|XP_001231325.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 2 [Gallus
gallus]
Length = 483
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSCCLRQPCTKDRKLFVGMLNKQQSEDDVR 167
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 168 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 227
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 228 ADTDKERTMRRMQQMAGQ 245
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 315 NNSPGSVSPAVANSNPSTSS-------SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|432852722|ref|XP_004067352.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Oryzias latipes]
Length = 493
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 73/93 (78%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
+I+GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+
Sbjct: 401 KIKGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPS 460
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 493
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|432852726|ref|XP_004067354.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 4
[Oryzias latipes]
Length = 494
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 121/187 (64%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 39 HDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 98
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 99 AQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEE 158
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 159 CTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRR 218
Query: 192 AQKAQSQ 198
+ Q
Sbjct: 219 MHQMAGQ 225
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 404 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 463
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 464 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 494
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|226371657|ref|NP_573458.2| CUGBP Elav-like family member 4 isoform D [Mus musculus]
Length = 484
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|208022666|ref|NP_001129075.1| CUG-BP- and ETR-3-like factor 5 [Rattus norvegicus]
Length = 395
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 129/217 (59%), Gaps = 12/217 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 65 QTALHEQKTLPGMARPIQVKPADSENRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 124
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 125 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 184
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
Q+ Q L PSL LP PY+ Y
Sbjct: 185 MQQMVGQLGIL------TPSL--TLPFS---PYSAYA 210
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 409
LF+ IP+ +Q+L F+ FGR+ V D TGV K F++Y + SA A A
Sbjct: 8 KLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTA 67
Query: 410 MMNGCQLGGKKLKVQLKRDNKQNK 433
+ L G +Q+K + +N+
Sbjct: 68 LHEQKTLPGMARPIQVKPADSENR 91
>gi|301769063|ref|XP_002919950.1| PREDICTED: CUGBP Elav-like family member 4-like [Ailuropoda
melanoleuca]
Length = 463
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 121/197 (61%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRR 170
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+A
Sbjct: 171 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINSLHGSQTMPGASSSLVVKFA 230
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 231 DTDKERTMRRMQQMAGQ 247
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|26339326|dbj|BAC33334.1| unnamed protein product [Mus musculus]
Length = 484
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|62089134|dbj|BAD93011.1| bruno-like 4, RNA binding protein variant [Homo sapiens]
Length = 510
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 75 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 134
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 135 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 194
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 195 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 254
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 255 ADTDKERTMRRMQQMAGQ 272
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 440 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 479
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 480 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 510
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 81 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 140
>gi|33872777|gb|AAH04167.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
gi|37515278|gb|AAH01946.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
Length = 484
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 414 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 453
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 454 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|207080190|ref|NP_001128833.1| CUGBP Elav-like family member 4 isoform 2 [Pongo abelii]
gi|55730138|emb|CAH91793.1| hypothetical protein [Pongo abelii]
Length = 456
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 120/196 (61%), Gaps = 9/196 (4%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSAL 122
A +A H +KTLPG + P+QVK AD E KLF+GML K SE +V L
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRL 170
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+AD
Sbjct: 171 FEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFAD 230
Query: 183 TEKERQARRAQKAQSQ 198
T+KER RR Q+ Q
Sbjct: 231 TDKERTMRRMQQMAGQ 246
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|148664594|gb|EDK97010.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 485
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|395501660|ref|XP_003755209.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 399
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 18 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 77
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 78 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 137
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 138 ECTILRGPDGTSKGCAFVKFGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTLR 197
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 198 RMHQMAGQ 205
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 309 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASA 368
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 369 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 399
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y +S AQ+A+
Sbjct: 24 LFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSAL 83
>gi|62858167|ref|NP_001016491.1| CUG-BP- and ETR-3-like factor 3 [Xenopus (Silurana) tropicalis]
gi|89272955|emb|CAJ83148.1| trinucleotide repeat containing 4 [Xenopus (Silurana) tropicalis]
Length = 313
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 123/184 (66%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA +
Sbjct: 7 IKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQS 66
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I + +
Sbjct: 67 ALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTV 126
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR Q+
Sbjct: 127 LRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRMQQ 186
Query: 195 AQSQ 198
+Q
Sbjct: 187 VANQ 190
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 403
P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALK 63
Query: 404 AQNAI 408
AQ+A+
Sbjct: 64 AQSAL 68
>gi|187761301|ref|NP_001020259.1| CUGBP Elav-like family member 4 isoform 3 [Homo sapiens]
Length = 484
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 414 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 453
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 454 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|156352255|ref|XP_001622676.1| predicted protein [Nematostella vectensis]
gi|156209270|gb|EDO30576.1| predicted protein [Nematostella vectensis]
Length = 455
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 130/236 (55%), Gaps = 15/236 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ E L +F+ + + E+ I+KDK T +GC F+ SR + A
Sbjct: 20 VKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKGCAFLTFCSRDACNAAQK 79
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
H KKTLPG P+QVK AD E + + KLF+GM+ K+ E ++ +FS +GTI++L +
Sbjct: 80 HLHEKKTLPGMHHPIQVKPADSETKSDDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 139
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LR + TSKGCAF+K+ + QA A+ ++ MEG S PLVVK+ADTEKE+ ++
Sbjct: 140 LRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTMEGCSSPLVVKFADTEKEKLQKKM-- 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
QH + FG + G A P Y + S + P + PG
Sbjct: 198 -------------QHLAAFGGMAFGGASPGFPLAYNPALSQQVKLAYNPALSQHPG 240
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S++R KLFVG + KH E L MF F ++E+ ++++ + S+GC F+ +R +A
Sbjct: 105 SDDR-KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADS-TSKGCAFIKFANRMQAQ 162
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ HN T+ G SSPL VK+AD E E+L+ K+
Sbjct: 163 NAIATMHNSTTMEGCSSPLVVKFADTEKEKLQKKM 197
>gi|410912254|ref|XP_003969605.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Takifugu
rubripes]
Length = 481
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 121/187 (64%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 39 HDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 98
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 99 AQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFESFGQIEE 158
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 159 CTVLRGPDGASKGCAFVKFSSHGEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRR 218
Query: 192 AQKAQSQ 198
+ Q
Sbjct: 219 MHQMAGQ 225
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 391 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 450
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 451 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|56403901|emb|CAI29735.1| hypothetical protein [Pongo abelii]
Length = 486
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 120/197 (60%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRR 170
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LV K+A
Sbjct: 171 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVAKFA 230
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 231 DTDKERTMRRMQQMAGQ 247
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|390344759|ref|XP_782270.3| PREDICTED: CUGBP Elav-like family member 1-A-like
[Strongylocentrotus purpuratus]
Length = 605
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 122/192 (63%), Gaps = 4/192 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF EF V E+N+++DK T S+GC FV S ADKA
Sbjct: 55 DSLKMFVGQIPKAYEEDKLREMFSEFGPVYELNVLRDKKTGESKGCAFVTFYSGVVADKA 114
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN+K LPG P+Q+K AD E+E E KLF+GML K E++V +FS +G+I++
Sbjct: 115 QKELHNRKVLPGMRHPIQMKPADCEVE--ERKLFVGMLSKKCDESDVRIMFSAFGSIEEC 172
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR KGCAF+ Y T++ AL + +++ M+G + LVVK+ADT+KE++ ++
Sbjct: 173 HILRDQMGGHKGCAFVTYATRQMALNCIRSMHQSRIMDGCTSKLVVKFADTQKEKEQKKL 232
Query: 193 QKAQSQA--NNL 202
Q+ Q NNL
Sbjct: 233 QQMAQQMCYNNL 244
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 393
Q EGP GANLFIYH+PQ++ D +L + F +G +LSAKVF+DK T +SKCF
Sbjct: 541 QKEGPEGANLFIYHLPQDYTDTDLISMFSPYGGILSAKVFIDKNTNLSKCF 591
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 25/109 (22%)
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG----------PPGANLFIYHIP 358
+ +RPL +P S P + N+ G+I G P +F+ IP
Sbjct: 21 MNNRPLTGNPDS--PMMMNT-------------GEISGVPPPQTAQPDPDSLKMFVGQIP 65
Query: 359 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 407
+ + + +L F FG V V DK TG SK FV++ S A A
Sbjct: 66 KAYEEDKLREMFSEFGPVYELNVLRDKKTGESKGCAFVTFYSGVVADKA 114
>gi|432852728|ref|XP_004067355.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 5
[Oryzias latipes]
Length = 443
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 73/93 (78%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
+I+GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+
Sbjct: 351 KIKGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPS 410
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 411 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 443
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|85376478|gb|ABC70476.1| bruno-like [Schmidtea mediterranea]
Length = 404
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 178/375 (47%), Gaps = 63/375 (16%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLFIGML KN SE +V L YG IK+ IL+ S SKGCAF+ Y ++A A+E++
Sbjct: 35 KLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDSYGNSKGCAFVTYNNSDEANMAIESL 94
Query: 164 NG-KHKME----GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
NG K M GS + V + AD E+ERQ R+ Q P P G
Sbjct: 95 NGMKTSMACPELGSCI--VARLADNEQERQLRKMQMQ------FPAIQLLTPQNVGYYNQ 146
Query: 219 GYAP------PY----------NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGN 262
G P P+ N Y Q S PP+ N + P G
Sbjct: 147 GIVPMILQQFPHATDQQTANLINAYALQMHLSQMYSPNLTPPLVNSSP--SVTPQPQIGV 204
Query: 263 AMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSV 321
M A+ D+SSN N+ + PS P P L Y P ++ +N +P ++
Sbjct: 205 PMSAAN-DISSNQCSMNHFVLPS-INNENIPLSPALNSYINPAHPQLINIANINFTPEAL 262
Query: 322 -----------------SPAVA----NSNPSTSSSGGTGSGGQ--------IEGPPGANL 352
+PA+ N P+T++ Q + GP G NL
Sbjct: 263 HLPSLYSMFPQCGFNLNTPALGLSGQNIYPNTTALSLQYQQNQKDGIKDNIVTGPEGCNL 322
Query: 353 FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 412
FIYH+PQ+FGD L F FG V+SAKV++D+AT SKCFGFVS+++ ++A+ AI MN
Sbjct: 323 FIYHLPQDFGDAALAQLFTPFGNVISAKVYLDRATNQSKCFGFVSFDNASNAEAAIRGMN 382
Query: 413 GCQLGGKKLKVQLKR 427
G Q+G K+LKVQLKR
Sbjct: 383 GFQIGTKRLKVQLKR 397
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
++ +E KLF+G + K+ +E + + + + + I+KD S+GC FV + E
Sbjct: 28 QNHDENTKLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDSYGN-SKGCAFVTYNNSDE 86
Query: 69 ADKAVNACHNKKT---LPGASSPLQVKYADGELERLEHKL 105
A+ A+ + + KT P S + + AD E ER K+
Sbjct: 87 ANMAIESLNGMKTSMACPELGSCIVARLADNEQERQLRKM 126
>gi|326675888|ref|XP_003200459.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Danio rerio]
Length = 516
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 120/186 (64%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A KA
Sbjct: 32 DAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKA 91
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E E KLF+GML K E +V LF +G I++
Sbjct: 92 QSALHEQKTLPGMNRPIQVKPADSEGRGEERKLFVGMLGKQQCEEDVRCLFEAFGQIEEC 151
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 152 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRM 211
Query: 193 QKAQSQ 198
+ Q
Sbjct: 212 HQMAGQ 217
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 321 VSPAVANSNPSTSSSGGTGSGGQIEGP----PGANLFIYHIPQEFGDQELGNAFQAFGRV 376
++ A + ST++S G G + P LFI IP+ +++L F+ FG++
Sbjct: 1 MASVTAENGFSTANSSGNGRMNGLTIPLKDHDAIKLFIGQIPRNLEEKDLKPLFEEFGKI 60
Query: 377 LSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
V D+ TG+ K F++Y ES AQ+A+
Sbjct: 61 YELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 95
>gi|82541152|ref|XP_724838.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479626|gb|EAA16403.1| FCA gamma-related [Plasmodium yoelii yoelii]
Length = 387
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 177/365 (48%), Gaps = 91/365 (24%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+ E QL +F+EF +V+EV II+DK T + FV S EAD A+
Sbjct: 86 IKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIR 145
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPKN++E + +F
Sbjct: 146 SLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMF 205
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 206 SVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLEGCNRPVEVRFAE 265
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
+ +QA+ Q +
Sbjct: 266 PKSSKQAQS-----------------------------------------------QVGI 278
Query: 243 PPMQNQPGFHGIIPPVNQG---NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-----A 294
P+QN P HGI P + G N G + +++N PR + + G G P
Sbjct: 279 QPLQNAP--HGISPQAHPGTPNNINYGNNFGVNNNY-PRQVGVWKEYYSGEGRPYYYNEQ 335
Query: 295 VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFI 354
Q+ MP L +NN+P N S SS GPPGANLFI
Sbjct: 336 TNTTQWEMPKEFETLF---MNNNPNI-------HNLSDSS-----------GPPGANLFI 374
Query: 355 YHIPQ 359
+H+PQ
Sbjct: 375 FHVPQ 379
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 58/87 (66%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 179 ESGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 238
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+++ + KKTL G + P++V++A+
Sbjct: 239 ALYAISSLNGKKTLEGCNRPVEVRFAE 265
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LFI +P+ + +++L F+ FG V + DK T + K FV S + A N
Sbjct: 83 PVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADN 142
Query: 407 AIAMMNG-----CQLGGKKLK 422
AI +N QLG ++K
Sbjct: 143 AIRSLNNQRTLDQQLGSLQVK 163
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
G A LFI +P+ ++ + + F +G V + D +TG+ K FV + A
Sbjct: 181 GVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQAL 240
Query: 406 NAIAMMNG 413
AI+ +NG
Sbjct: 241 YAISSLNG 248
>gi|449668124|ref|XP_002167931.2| PREDICTED: CUGBP Elav-like family member 2-like [Hydra
magnipapillata]
Length = 511
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLF+GQVP++ TE +L + + + + E++I+ DK T +GC F++ ++ A++
Sbjct: 19 EACKLFIGQVPRNWTEKELRPILEPYGEIHELSILYDKYTGQHKGCAFLVFYEKEAANRC 78
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N H K+TLPG+ + +QVK A+ E++ + KLFIGML K ++E ++ +FS YGTI++L
Sbjct: 79 QNELHEKRTLPGSVNKMQVKPAESEIKTEDRKLFIGMLSKKLNEDDLRIMFSPYGTIEEL 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR SKGCAF+KY T+ QA A++A++ ME S P+VVK ADTE+E+ +R
Sbjct: 139 TILRNPDGGSKGCAFIKYSTRLQAQNAIKAMHNSQTMENCSSPVVVKIADTEREKIQKR- 197
Query: 193 QKAQSQANNL 202
QS A NL
Sbjct: 198 --MQSMATNL 205
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 418 QKEGPDGANLFIYHLPQEFTDADLMQTFMPFGNVVSAKVFIDKPTLLSKCFGFVSYDNSL 477
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SA NAI M+G +G K+LKVQLKR K KPY
Sbjct: 478 SATNAINAMHGFSIGSKRLKVQLKRP-KDKKPY 509
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E + E KLF+G + K + E L MF + ++E+ I+++ S+GC F+ +R
Sbjct: 101 ESEIKTEDRKLFIGMLSKKLNEDDLRIMFSPYGTIEELTILRNPDG-GSKGCAFIKYSTR 159
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+ A HN +T+ SSP+ VK AD E E+++ ++
Sbjct: 160 LQAQNAIKAMHNSQTMENCSSPVVVKIADTEREKIQKRM 198
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
++K+ +K + LF+ +P+ T+A L+ F F V + DK T S+ FV
Sbjct: 413 QAKQPQKEGPDGANLFIYHLPQEFTDADLMQTFMPFGNVVSAKVFIDKPTLLSKCFGFVS 472
Query: 63 CPSRQEADKAVNACH 77
+ A A+NA H
Sbjct: 473 YDNSLSATNAINAMH 487
>gi|148228597|ref|NP_001084196.1| CUGBP Elav-like family member 1-A [Xenopus laevis]
gi|82227733|sp|O57406.1|CEL1A_XENLA RecName: Full=CUGBP Elav-like family member 1-A; Short=CELF-1A;
AltName: Full=Bruno-like protein 2-A; AltName: Full=CUG
triplet repeat RNA-binding protein 1-A; Short=CUG-BP1-A;
AltName: Full=CUG-BP- and ETR-3-like factor 1-A;
AltName: Full=Embryo deadenylation element-binding
protein A; Short=EDEN-BP-A; AltName: Full=RNA-binding
protein BRUNOL-2-A; AltName: Full=p53/p55
gi|2781419|gb|AAC41243.1| embryo deadenylation element binding protein [Xenopus laevis]
gi|80478529|gb|AAI08575.1| CUGBP1 protein [Xenopus laevis]
Length = 489
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 132/206 (64%), Gaps = 4/206 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ KN +E ++ A+FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGMSRGCAFVTFTTRSMAQMAIKSMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG 214
+R + Q NA S +L G
Sbjct: 194 QKRMTQQLQQQMQQLNAASMWGNLTG 219
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 329 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 387
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG V+S+KVF+DK T
Sbjct: 382 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQT 441
Query: 388 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 442 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K+ E + AMF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQIEECRILRGPDGM-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRSMAQMAIKSMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 197
>gi|357155243|ref|XP_003577055.1| PREDICTED: flowering time control protein FCA-like [Brachypodium
distachyon]
Length = 749
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F + V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 127 VKLFVGSVPRTANEDDVRPLFADHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 186
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +FS +G ++D
Sbjct: 187 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFSPFGHVED 246
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 247 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYVMRGCEQPLIVRFADPKRPR 302
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 129 LFVGSVPRTANEDDVRPLFADHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 188
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 189 HNQCTIPGAMGPVQVR 204
>gi|32482079|gb|AAP84395.1| FCA protein [Triticum aestivum]
Length = 734
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 117 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 176
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 177 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 236
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PLVV++AD ++ R
Sbjct: 237 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLVVRFADPKRPR 292
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 119 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 178
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 179 HNQCTIPGAMGPVQVR 194
>gi|294941928|ref|XP_002783310.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239895725|gb|EER15106.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 429
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 214/463 (46%), Gaps = 93/463 (20%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MA + E S VKLFV +P H E+ L A+F+E+ +V++V I++D++T SRG F
Sbjct: 4 MAADRMESTS----VKLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAF 59
Query: 61 V---ICPSRQEADKAVNA---CHNKKT--------------LPGASSPLQVKYADGELER 100
V PS A KA+N CHN T + PL V A GE ER
Sbjct: 60 VRFRDIPSGMAAIKALNGYRLCHNTSTSCIDNDVESVNDMSFAQSHIPLSVSLAQGEAER 119
Query: 101 L-----------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLK 149
L + KLF+ L E E+ +F +G I ++ + AF++
Sbjct: 120 LGMHGEVVATGGDTKLFVSGLGPGTQEEELRTIFEPFGRINEVHV----PGPHALYAFVR 175
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQH 209
+ KE AL A+ +NG+ +EGS PL VK A++ + R A Q Q
Sbjct: 176 FAEKEDALKAIREVNGRVTVEGSQRPLEVKVAESRAAKADRNAHHQQQQ----------- 224
Query: 210 PSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASP 269
+GY+ G+ GL RL G +P + GA+
Sbjct: 225 -----------------HGYEGVGATGL---RL-----MAGAAASLP-------INGATS 252
Query: 270 DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSP---GSVSPAVA 326
L+S P P + G P+ G Q P G + ++++P + + V
Sbjct: 253 SLTS---PGRLDTPTINGIRGGSPS--GTQAPRT-AGVWTEYFTMDDTPYYHNARTNEVQ 306
Query: 327 NSNPST-SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 385
P+ + + Q +GPPGAN+F++ +P + + +L + F +FG ++SAKV VDK
Sbjct: 307 WEMPAEFRNPINVHTAPQTKGPPGANVFVFWVPDAWTEDDLRDHFSSFGNIVSAKVVVDK 366
Query: 386 ATGVSKCFGFVSYESPASAQNAIAMMNG-CQLGGKKLKVQLKR 427
TG+S+ +GF+SY++ SA A+A MNG G+++KVQ+K+
Sbjct: 367 HTGLSRGYGFISYDNAQSAGRAVAEMNGFVAANGRRIKVQIKK 409
>gi|22760138|dbj|BAC11082.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+G++P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGRIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEEDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGGQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERMMRRMQQMAGQ 246
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 414 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 453
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 454 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGRIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|410920283|ref|XP_003973613.1| PREDICTED: CUGBP Elav-like family member 4-like [Takifugu rubripes]
Length = 530
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 121/193 (62%), Gaps = 6/193 (3%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 48 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 107
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 108 AQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGCIEE 167
Query: 132 LQILRGSQQTSKG------CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
ILRG SKG C+ +K+ + +A AA+ A++G M G+S LVVK+ADT+K
Sbjct: 168 CTILRGPDGNSKGELGAASCSIVKFSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDK 227
Query: 186 ERQARRAQKAQSQ 198
ER RR Q+ Q
Sbjct: 228 ERTIRRMQQMAGQ 240
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++P SA
Sbjct: 440 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 499
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 500 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 530
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 53 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNAL 112
>gi|32482371|gb|AAP84378.1| FCA protein [Triticum aestivum]
Length = 736
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRNTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 121 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRNTGEQQGCCFVKYATSEEAERAIRAL 180
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 181 HNQCTIPGAMGPVQVR 196
>gi|328871825|gb|EGG20195.1| hypothetical protein DFA_07315 [Dictyostelium fasciculatum]
Length = 551
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFA-LVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
VK+F+GQ+PK TE L MF +F ++E+ +I++K T+ +GC F+ + A+K++
Sbjct: 5 VKIFIGQIPKSFTEDDLREMFADFVDSIEEIKVIRNKATQEPQGCAFITMTNPDVAEKSI 64
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HN K PG S+ LQVKYAD E E+L KLF+GMLPK +E +V LFS YG + ++
Sbjct: 65 QQLHNSKKFPGVSNFLQVKYADSEQEKLSTKLFVGMLPKEYNEDDVRKLFSDYGDVDEIC 124
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
ILRG SK C F+K++++E L A+ ++NG ++ S LVVK+ADTEK+R+ +
Sbjct: 125 ILRGPNNQSKSCGFIKFQSRESCLNAISSLNGI-RIPPSPHNLVVKFADTEKDRKNK 180
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q GP G+NLF+Y+IP + D EL F FG V+S+KVF+DK TG SK FGFVS+++P
Sbjct: 461 QSVGPSGSNLFVYNIPNFYTDVELSVLFDPFGAVISSKVFIDKNTGTSKGFGFVSFDNPN 520
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SA AI +NG L GKKLKV +K N + PY
Sbjct: 521 SATTAITNLNGMMLNGKKLKVTVK--NSNSNPY 551
>gi|324501916|gb|ADY40847.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 501
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 6/192 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 31 DAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRC 90
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V ALF+ +
Sbjct: 91 QAALHDQKTLPGMNRAMQVKPADSESRPNSPKNAEERKLFVGMLSKQQNEDDVRALFAPF 150
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 151 GAIDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQTMPGASSSLVVKFADTEKE 210
Query: 187 RQARRAQKAQSQ 198
RQ RR Q+ +Q
Sbjct: 211 RQLRRMQQMAAQ 222
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G+ ++ GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGF+SY
Sbjct: 407 GTQKEVLGPEGCNLFIYHLPQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFISY 466
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
++ ASA AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 467 DNSASAMAAIQAMNGFQIGMKRLKVQLKR--PRDKPY 501
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K++EER KLFVG + K E + A+F F +DEV +++ S+GC FV + +
Sbjct: 122 KNAEER-KLFVGMLSKQQNEDDVRALFAPFGAIDEVTVLRG-ADGLSKGCAFVKFAAHSQ 179
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A++A H +T+PGASS L VK+AD E ER
Sbjct: 180 AAMAISALHGSQTMPGASSSLVVKFADTEKER 211
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 319 GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 378
G++SPA S +G ++ LF+ IP+ +++L + F++FG++
Sbjct: 12 GALSPA----------SSTDSNGFPVKDSDAIKLFVGQIPRNLEEKDLRHLFESFGKIYE 61
Query: 379 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 434
+ DK TG+ K F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 62 FTILKDKYTGLHKGCAFLTYCHRDSALRCQAALHDQKTLPGMNRAMQVKPADSESRP 118
>gi|32482140|gb|AAP84416.1| FCA protein, partial [Triticum aestivum]
Length = 740
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 110 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 166
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 167 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 205
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 181
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|32482114|gb|AAP84409.1| FCA protein [Triticum aestivum]
Length = 736
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 121 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 180
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 181 HNQCTIPGAMGPVQVR 196
>gi|32482142|gb|AAP84417.1| FCA-A1 [Triticum aestivum]
gi|32482144|gb|AAP84418.1| FCA-A2 [Triticum aestivum]
Length = 741
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 124 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 183
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 184 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 243
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 244 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 299
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 126 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 185
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 186 HNQCTIPGAMGPVQVR 201
>gi|324505949|gb|ADY42547.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 476
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 6/192 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 31 DAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRC 90
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V ALF+ +
Sbjct: 91 QAALHDQKTLPGMNRAMQVKPADSESRPNSPKNAEERKLFVGMLSKQQNEDDVRALFAPF 150
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 151 GAIDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQTMPGASSSLVVKFADTEKE 210
Query: 187 RQARRAQKAQSQ 198
RQ RR Q+ +Q
Sbjct: 211 RQLRRMQQMAAQ 222
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G+ ++ GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGF+SY
Sbjct: 382 GTQKEVLGPEGCNLFIYHLPQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFISY 441
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
++ ASA AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 442 DNSASAMAAIQAMNGFQIGMKRLKVQLKR--PRDKPY 476
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K++EER KLFVG + K E + A+F F +DEV +++ S+GC FV + +
Sbjct: 122 KNAEER-KLFVGMLSKQQNEDDVRALFAPFGAIDEVTVLRG-ADGLSKGCAFVKFAAHSQ 179
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A++A H +T+PGASS L VK+AD E ER
Sbjct: 180 AAMAISALHGSQTMPGASSSLVVKFADTEKER 211
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 319 GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 378
G++SPA S +G ++ LF+ IP+ +++L + F++FG++
Sbjct: 12 GALSPA----------SSTDSNGFPVKDSDAIKLFVGQIPRNLEEKDLRHLFESFGKIYE 61
Query: 379 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 434
+ DK TG+ K F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 62 FTILKDKYTGLHKGCAFLTYCHRDSALRCQAALHDQKTLPGMNRAMQVKPADSESRP 118
>gi|32482123|gb|AAP84412.1| FCA protein, partial [Triticum aestivum]
Length = 737
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 181
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|32482147|gb|AAP84419.1| FCA-B2 [Triticum aestivum]
Length = 740
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 182 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 297
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 112 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 168
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 169 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 207
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 124 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 183
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 184 HNQCTIPGAMGPVQVR 199
>gi|32482390|gb|AAP84384.1| FCA protein [Triticum aestivum]
Length = 737
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 181
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|32482094|gb|AAP84400.1| FCA protein [Triticum aestivum]
Length = 737
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 121 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 180
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 181 HNQCTIPGAMGPVQVR 196
>gi|32482081|gb|AAP84396.1| FCA protein [Triticum aestivum]
Length = 719
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 116 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 175
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 176 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 235
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 236 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 291
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 118 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 177
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 178 HNQCTIPGAMGPVQVR 193
>gi|32482092|gb|AAP84399.1| FCA protein [Triticum aestivum]
Length = 740
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 124 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 183
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 184 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 243
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 244 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 299
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 126 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 185
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 186 HNQCTIPGAMGPVQVR 201
>gi|32482108|gb|AAP84406.1| FCA protein [Triticum aestivum]
Length = 724
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 107 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 166
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 167 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 226
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 227 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 282
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 109 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 168
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 169 HNQCTIPGAMGPVQVR 184
>gi|32482106|gb|AAP84405.1| FCA protein [Triticum aestivum]
Length = 735
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD + R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPRRPR 293
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|32482074|gb|AAP84393.1| FCA protein [Triticum aestivum]
Length = 724
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 107 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 166
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 167 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 226
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 227 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 282
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 109 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 168
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 169 HNQCTIPGAMGPVQVR 184
>gi|32482125|gb|AAP84413.1| FCA protein, partial [Triticum aestivum]
Length = 722
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 114 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 173
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 174 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 233
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 234 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 289
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 104 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 160
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 161 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 199
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 116 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 175
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 176 HNQCTIPGAMGPVQVR 191
>gi|32482149|gb|AAP84420.1| FCA-D1 [Triticum aestivum]
Length = 659
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 39 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVEYATSEEAERAIR 98
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 99 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 158
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 159 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 214
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 29 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 85
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+Y T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 86 EYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 124
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 41 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVEYATSEEAERAIRAL 100
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 101 HNQCTIPGAMGPVQVR 116
>gi|198431449|ref|XP_002130974.1| PREDICTED: similar to HrETR-1 [Ciona intestinalis]
Length = 538
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 122/190 (64%)
Query: 5 KKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP 64
K+ + ++ VKLF+GQVPK+ E +L +F F + E+++++DK T +GC F+
Sbjct: 65 KETPEKDDDAVKLFIGQVPKNWEEKELRQVFAPFGEIFELSVLRDKYTGMHKGCAFLTYT 124
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS 124
+ A A N+ H +KTLPG + P+QVK AD + + KLF+GML K +E +V LF
Sbjct: 125 QKTSAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGEDRKLFVGMLGKRQNEDDVRILFE 184
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+GTI++ ILR + SKGCAF+K ++A +A+EA++G M G+S LVVK+ADT+
Sbjct: 185 PFGTIEECTILRTPEGQSKGCAFVKLSCHQEAKSAMEALHGSQTMPGASSSLVVKFADTD 244
Query: 185 KERQARRAQK 194
KER RR Q+
Sbjct: 245 KERAVRRMQQ 254
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 73/93 (78%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEF D +L N FQ FG V+SAKVF+D+AT SKCFGFVS+++
Sbjct: 446 QKEGPDGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFIDRATNQSKCFGFVSFDNAI 505
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
S+Q AI MNG Q+G K+LKVQLKR +Q++PY
Sbjct: 506 SSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY 538
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 407
LFI +P+ + ++EL F FG + V DK TG+ K F++Y SA NA
Sbjct: 74 AVKLFIGQVPKNWEEKELRQVFAPFGEIFELSVLRDKYTGMHKGCAFLTYTQKTSAMNA 132
>gi|32482090|gb|AAP84398.1| FCA protein [Triticum aestivum]
Length = 719
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 104 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 163
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 164 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 223
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 224 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 279
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 106 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 165
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 166 HNQCTIPGAMGPVQVR 181
>gi|289547568|ref|NP_001166111.1| CUGBP Elav-like family member 1 isoform 5 [Homo sapiens]
Length = 485
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 133
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 193
Query: 190 RR 191
+R
Sbjct: 194 KR 195
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 374 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 432
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 433 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 151
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 152 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 196
>gi|32482065|gb|AAP84389.1| FCA protein [Triticum aestivum]
Length = 739
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 123 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 182
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 183 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 242
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ +++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 243 VYVMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 298
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 125 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 184
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 185 HNQCTIPGAMGPVQVR 200
>gi|301772548|ref|XP_002921692.1| PREDICTED: CUGBP Elav-like family member 1-like [Ailuropoda
melanoleuca]
Length = 512
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|380024253|ref|XP_003695918.1| PREDICTED: CUGBP Elav-like family member 3-like [Apis florea]
Length = 269
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 158/317 (49%), Gaps = 52/317 (16%)
Query: 120 SALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
S L ++G +D +G ++ ++ GCAF+K + ++ALAA+ ++G M G+S LVV
Sbjct: 4 SPLMKVWG--QDGMGTKGHRKENQCGCAFVKLSSHQEALAAINTLHGSQTMPGASSSLVV 61
Query: 179 KWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLM 238
K+ADTEKERQ RR Q+ A N M P+N + +
Sbjct: 62 KFADTEKERQLRRMQQ---MAGN----------------MSLLNPFNVFNQFGAYGAYAQ 102
Query: 239 QYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGL 298
Q I P + G P + M N +PP+ S YPAV G
Sbjct: 103 QQAALMAAATAQGTYINPMAALAHVGAGQLPHALNGM--PNPVVPPT----SAYPAVYG- 155
Query: 299 QYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIP 358
Q+P P P T+ + G I GP G NLFIYH+P
Sbjct: 156 QFPQAIP-----------------------QPMTAVAPTQREGCSISGPEGCNLFIYHLP 192
Query: 359 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 418
QEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G
Sbjct: 193 QEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGM 252
Query: 419 KKLKVQLKRDNKQNKPY 435
K+LKVQLKR ++PY
Sbjct: 253 KRLKVQLKRPKDASRPY 269
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
GC FV S QEA A+N H +T+PGASS L VK+AD E ER ++
Sbjct: 27 GCAFVKLSSHQEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRM 75
>gi|338712047|ref|XP_003362650.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 2 [Equus
caballus]
gi|345783916|ref|XP_003432496.1| PREDICTED: CUGBP, Elav-like family member 1 [Canis lupus
familiaris]
gi|410973717|ref|XP_003993294.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Felis catus]
Length = 512
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|440903464|gb|ELR54119.1| CUGBP Elav-like family member 1 [Bos grunniens mutus]
Length = 512
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLAQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|289547566|ref|NP_001166110.1| CUGBP Elav-like family member 1 isoform 4 [Homo sapiens]
gi|109106411|ref|XP_001106041.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 4 [Macaca
mulatta]
gi|296218064|ref|XP_002755281.1| PREDICTED: CUGBP Elav-like family member 1 [Callithrix jacchus]
gi|332259914|ref|XP_003279029.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|397488336|ref|XP_003815223.1| PREDICTED: CUGBP Elav-like family member 1 [Pan paniscus]
gi|402893566|ref|XP_003909963.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Papio anubis]
gi|168275618|dbj|BAG10529.1| CUG triplet repeat RNA-binding protein 1 [synthetic construct]
Length = 512
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|32482116|gb|AAP84410.1| FCA protein [Triticum aestivum]
Length = 707
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 102 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 161
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 162 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 221
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 222 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 277
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 92 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 148
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 149 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 187
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 104 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 163
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 164 HNQCTIPGAMGPVQVR 179
>gi|32482394|gb|AAP84386.1| FCA protein [Triticum aestivum]
Length = 735
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L + + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNRQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|344281041|ref|XP_003412289.1| PREDICTED: CUGBP Elav-like family member 1-like [Loxodonta
africana]
Length = 512
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|82237708|sp|Q6PF35.1|CEL1B_XENLA RecName: Full=CUGBP Elav-like family member 1-B; Short=CELF-1B;
AltName: Full=Bruno-like protein 2-B; AltName: Full=CUG
triplet repeat RNA-binding protein 1-B; Short=CUG-BP1-B;
AltName: Full=CUG-BP- and ETR-3-like factor 1-B;
AltName: Full=Embryo deadenylation element-binding
protein B; Short=EDEN-BP-B; AltName: Full=RNA-binding
protein BRUNOL-2-B; AltName: Full=p53/p55
gi|34784678|gb|AAH57743.1| Cugbp1-b protein [Xenopus laevis]
Length = 489
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ LFS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKKCNENDIRTLFSQFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG 214
+R + Q NA S +L G
Sbjct: 194 QKRMTQQLQQQMQQLNAASMWGNLAG 219
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 329 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 387
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T
Sbjct: 382 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQT 441
Query: 388 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SKCFGF+SY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 442 NLSKCFGFISYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
>gi|32482100|gb|AAP84402.1| FCA protein [Triticum aestivum]
Length = 736
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F+ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFENHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFENHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|334331817|ref|XP_001364287.2| PREDICTED: CUGBP Elav-like family member 1-like [Monodelphis
domestica]
Length = 512
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DSIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 223
>gi|291232672|ref|XP_002736280.1| PREDICTED: bruno-2-like [Saccoglossus kowalevskii]
Length = 500
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 120/185 (64%), Gaps = 6/185 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L +EF V ++N+++DK T SRGCCFV +R+ A +A
Sbjct: 30 DAIKMFVGQIPRSMDENDLREFLEEFGPVYQLNVLRDKVTGQSRGCCFVTYYTRKAALQA 89
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT+PG +Q+K AD E E KLF+GM+ K +E ++ +F+ +G+I++
Sbjct: 90 QNALHNVKTMPGMHHRIQMKPADSENRNEERKLFVGMISKKCNEGDIRLMFAPFGSIEEC 149
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK---MEGSSVPLVVKWADTEKERQA 189
+LR +Q SKGCAF+ + +K+ +AL AI KH+ MEG S L V++A+T KER
Sbjct: 150 TVLRDAQGVSKGCAFITFSSKQ---SALNAIQNKHQSVTMEGCSSSLQVRFAETVKERDQ 206
Query: 190 RRAQK 194
+R +K
Sbjct: 207 KRMRK 211
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 306 GGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLF-IYHIPQEFGDQ 364
GG+ G P +N + S +A + ++ G +GS G P AN + G
Sbjct: 377 GGLTGDSPTSNCTNNGSNLIAAAGLASGLQGLSGSTGL---PGDANWSGVAGSMNGLGST 433
Query: 365 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 424
L + G + +G+ + GFVSY++P SAQ AI MNG Q+G K+LKVQ
Sbjct: 434 GLNSNLS--GNAVDMNALSQAYSGIQQYAGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQ 491
Query: 425 LKRDNKQNKPY 435
LK+ ++KPY
Sbjct: 492 LKK--SKDKPY 500
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES- 400
GQ P +F+ IP+ + +L + FG V V DK TG S+ FV+Y +
Sbjct: 24 GQQPDPDAIKMFVGQIPRSMDENDLREFLEEFGPVYQLNVLRDKVTGQSRGCCFVTYYTR 83
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
A+ Q A+ N + G ++Q+K + +N+
Sbjct: 84 KAALQAQNALHNVKTMPGMHHRIQMKPADSENR 116
>gi|32482383|gb|AAP84381.1| FCA protein [Triticum aestivum]
Length = 737
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIGEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAATNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 110 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 166
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 167 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 205
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 181
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|32482061|gb|AAP84388.1| FCA protein [Triticum aestivum]
Length = 737
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIK 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFAKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIKAL 181
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|348545314|ref|XP_003460125.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 1
[Oreochromis niloticus]
Length = 509
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV SR+ A
Sbjct: 41 DAIKMFVGQIPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYSRKSAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS YG I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRLMFSPYGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSSQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRM 223
>gi|32482381|gb|AAP84380.1| FCA protein [Triticum aestivum]
Length = 721
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F+ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 104 VKLFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 163
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 164 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 223
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+++++G + M G PL+V++AD ++ R
Sbjct: 224 VYIMKDGMRQSRGCGFVKFSSKEPALAAMDSLSGTYIMRGCEQPLIVRFADPKRPR 279
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 94 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGEQQ---GCCFV 150
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 151 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 189
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 106 LFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 165
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 166 HNQCTIPGAMGPVQVR 181
>gi|68533093|dbj|BAE06101.1| CUGBP1 variant protein [Homo sapiens]
Length = 544
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 73 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 132
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 133 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 192
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 193 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 252
Query: 190 RR 191
+R
Sbjct: 253 KR 254
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 433 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 491
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 492 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 544
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 153 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 210
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 211 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 255
>gi|294886537|ref|XP_002771747.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239875509|gb|EER03563.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 422
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 207/469 (44%), Gaps = 112/469 (23%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MA + E S VKLFV +P H E+ L A+F+E+ +V++V I++D++T SRG F
Sbjct: 4 MAADRMESTS----VKLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAF 59
Query: 61 V---ICPSRQEADKAVNA---CHNKKT--------------LPGASSPLQVKYADGELER 100
V PS A KA+N HN T + PL V A GE ER
Sbjct: 60 VRFRDIPSGMAAIKALNGHRLSHNTSTSCIDNDVESVDDMSFDQSHIPLSVSLAQGEAER 119
Query: 101 L-----------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLK 149
L + KLF+ L E E+ +F +G I ++ + G AF++
Sbjct: 120 LGMHGEVVATGGDTKLFVSGLGPATQEEELRTIFEPFGRINEVHVP-GPHAL---YAFVR 175
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQH 209
+ KE AL A+ +NG+ +EGS PL VK A++ + R A Q Q
Sbjct: 176 FAEKEDALKAIREVNGRVTVEGSQRPLEVKVAESRAAKADRNAHHHQQQ----------- 224
Query: 210 PSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMR---- 265
+GY+ G+Y P + G+ G P + G R
Sbjct: 225 -----------------HGYEG-GAYD-------PTTSSSGYGGSPPLIAAGGTSRPLFK 259
Query: 266 -GASPDLSSNMGPRNYAMPPSGFVGSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSPG 319
G + D + PR + F P +Q+ MP P+N
Sbjct: 260 AGMAADPARTQAPRTAGVWTEYFTMDDTPYYHNARTNEVQWEMPAE----FRNPIN---- 311
Query: 320 SVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 379
++ P Q +GPPGAN+F++ +P + + +L + F +FG ++SA
Sbjct: 312 ------VHTAP------------QTKGPPGANVFVFSVPDAWTEDDLRDHFSSFGNIVSA 353
Query: 380 KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG-CQLGGKKLKVQLKR 427
KV VDK TG+S+ +GF+SY++ SA A+A MNG G+++KVQ+K+
Sbjct: 354 KVVVDKHTGLSRGYGFISYDNAQSAGRAVAEMNGFVAANGRRIKVQIKK 402
>gi|32482069|gb|AAP84391.1| FCA protein [Triticum aestivum]
Length = 732
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VK FVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 115 VKFFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 174
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 175 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 234
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 235 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 290
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
F+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 117 FFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 176
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 177 HNQCTIPGAMGPVQVR 192
>gi|327259665|ref|XP_003214656.1| PREDICTED: CUGBP Elav-like family member 1-like [Anolis
carolinensis]
Length = 514
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 403 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 461
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 223
>gi|32482388|gb|AAP84383.1| FCA protein [Triticum aestivum]
Length = 710
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F+ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEYHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEYHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|32482102|gb|AAP84403.1| FCA protein [Triticum aestivum]
Length = 730
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++ +
Sbjct: 113 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERVIR 172
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 173 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 232
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 233 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 288
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ I A+
Sbjct: 115 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERVIRAL 174
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 175 HNQCTIPGAMGPVQVR 190
>gi|32482373|gb|AAP84379.1| FCA protein [Triticum aestivum]
Length = 737
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++ +
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERVIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ I A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERVIRAL 181
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|32482076|gb|AAP84394.1| FCA protein [Triticum aestivum]
Length = 734
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 117 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 176
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 177 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 236
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE LAA+ +++G + M G PL+V++AD ++ R
Sbjct: 237 VYIMKDGMRQSRGCGFVKFSSKEPPLAAMNSLSGTYIMRGCEQPLIVRFADLKRPR 292
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 119 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 178
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 179 HNQCTIPGAMGPVQVR 194
>gi|32482104|gb|AAP84404.1| FCA protein [Triticum aestivum]
Length = 738
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 121 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 180
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+Y DGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 181 ALHNQCTIPGAMGPVQVRYTDGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 240
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 241 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 296
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 123 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 182
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 183 HNQCTIPGAMGPVQVR 198
>gi|148694025|gb|EDL25972.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 465
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 47 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 106
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 107 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 166
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 167 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 226
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 227 RMQQMAGQLGAF------HPA---PLPLGACGAYT 252
>gi|403220835|dbj|BAM38968.1| ribonucleoprotein [Theileria orientalis strain Shintoku]
Length = 604
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 199/431 (46%), Gaps = 68/431 (15%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+ ++P+ E + +F+EF V++V IIKDK T + C FV S +AD A+
Sbjct: 87 IKLFIARIPRDHKEEDIRKLFEEFGTVEDVTIIKDKATNVPKNCAFVKMASICQADAAIR 146
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+ +N+ T+ +Q++YA GE ERL KLF+G LP++ SE ++ L
Sbjct: 147 SLNNQHTVEPGLGAVQIRYATGEPERLGFTQMVGEPGVDTAKLFVGSLPRSFSEQDLQDL 206
Query: 123 FSIYGTIKDLQILRGSQQT-SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F YG + +++ +KGC F++ KEQAL A+ ++ K ++ S P+ V++
Sbjct: 207 FKDYGDAVETFLMKDMNSGGNKGCGFVRMRYKEQALYAIRELDHKKMVKDSVKPIEVRF- 265
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL-----PMGYAPPYNGYGYQASGSYG 236
AQS+ NA Q P L + P+ P G G +G YG
Sbjct: 266 -------------AQSK-----NAAPQDPRLMQRIKRPPPPLDGIFPNYGPGGNFNGGYG 307
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGF----VGSGY 292
++ R + G N GN + R Y P F V +G
Sbjct: 308 KLKKR-----KKNGASLGYMSYNNGNPRHAGAW--------REYISPDGRFYYFNVETG- 353
Query: 293 PAVPGLQYPMPYPGGML-GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGAN 351
Q+ +P L GH + A A NP++S +
Sbjct: 354 ----STQWEVPRDFLKLSGHGAGFGGYNNGGYAPA-GNPASSPGFNAVTDDSC------- 401
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LF++HIP ++ + +L F FGRV+ AK+ D+AT SK + FVSY++P SA A+A M
Sbjct: 402 LFVFHIPSQWNNSDLFRTFSPFGRVVKAKIVFDRATNRSKGYAFVSYDNPDSATQAVANM 461
Query: 412 NGCQLGGKKLK 422
NG + GKKLK
Sbjct: 462 NGFSILGKKLK 472
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ KLFVG +P+ +E L +FK++ E ++KD + ++GC FV +++A A
Sbjct: 185 DTAKLFVGSLPRSFSEQDLQDLFKDYGDAVETFLMKDMNSGGNKGCGFVRMRYKEQALYA 244
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ +KK + + P++V++A
Sbjct: 245 IRELDHKKMVKDSVKPIEVRFA 266
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LFI IP++ ++++ F+ FG V + DKAT V K FV S A
Sbjct: 84 PASIKLFIARIPRDHKEEDIRKLFEEFGTVEDVTIIKDKATNVPKNCAFVKMASICQADA 143
Query: 407 AIAMMN 412
AI +N
Sbjct: 144 AIRSLN 149
>gi|222142946|gb|ACI16484.2| flowering time control protein [Hordeum vulgare]
Length = 743
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 124 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 183
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 184 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 243
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++A+ ++ R
Sbjct: 244 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFANPKRPR 299
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 126 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 185
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 186 HNQCTIPGAMGPVQVR 201
>gi|32482110|gb|AAP84407.1| FCA protein [Triticum aestivum]
Length = 736
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE AL A+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALVAMNSLSGTYIMRGCEQPLIVQFADPKRPR 293
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 108 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 164
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 165 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 203
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|32482059|gb|AAP84387.1| FCA protein [Triticum aestivum]
Length = 728
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 111 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 170
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EH LF+ L K + E+ +F+ +G ++D
Sbjct: 171 ALHNQCTLPGAMGPVQVRYADGEKERHGSIEHILFVASLNKQATAKEIEEIFAPFGHVED 230
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 231 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 286
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 101 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 157
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 158 KYATSEEAERAIRALHNQCTLPGAMGPVQVRYADGEKER 196
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 113 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 172
Query: 411 MNGCQLGGKKLKVQLK 426
N C L G VQ++
Sbjct: 173 HNQCTLPGAMGPVQVR 188
>gi|335292432|ref|XP_003356730.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 3 [Sus scrofa]
Length = 453
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|34328409|ref|NP_780444.2| CUGBP Elav-like family member 6 [Mus musculus]
gi|81912009|sp|Q7TN33.1|CELF6_MOUSE RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|30851561|gb|AAH52406.1| Bruno-like 6, RNA binding protein (Drosophila) [Mus musculus]
Length = 460
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|74150748|dbj|BAE25504.1| unnamed protein product [Mus musculus]
Length = 486
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG ++G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFRIGMKRLKVQLKRSKNDSKPY 486
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|12852385|dbj|BAB29392.1| unnamed protein product [Mus musculus]
gi|148695566|gb|EDL27513.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Mus
musculus]
Length = 487
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|38570084|ref|NP_941955.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349585220|ref|NP_001231820.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349732093|ref|NP_001231832.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|19857900|sp|P28659.2|CELF1_MOUSE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Brain protein F41; AltName:
Full=Bruno-like protein 2; AltName: Full=CUG triplet
repeat RNA-binding protein 1; Short=CUG-BP1; AltName:
Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=Deadenylation factor CUG-BP; AltName:
Full=Deadenylation factor EDEN-BP; AltName: Full=Embryo
deadenylation element-binding protein homolog;
Short=EDEN-BP homolog; AltName: Full=RNA-binding protein
BRUNOL-2
gi|12054715|emb|CAC20707.1| deadenylation factor EDEN-BP [Mus musculus]
Length = 486
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|32482072|gb|AAP84392.1| FCA protein [Triticum aestivum]
Length = 736
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+Y DGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYVDGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I+R + S+GC +K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMRDGMRQSRGCGLVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 121 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 180
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 181 HNQCTIPGAMGPVQVR 196
>gi|70794748|ref|NP_001020592.1| CUGBP Elav-like family member 1 [Rattus norvegicus]
gi|81918148|sp|Q4QQT3.1|CELF1_RAT RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|67678292|gb|AAH98012.1| CUG triplet repeat, RNA binding protein 1 [Rattus norvegicus]
Length = 487
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|149022603|gb|EDL79497.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 486
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|8745539|gb|AAF78957.1|AF267535_1 CUG-binding protein LYLQ isoform [Mus musculus]
Length = 486
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|148695568|gb|EDL27515.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
gi|148695569|gb|EDL27516.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
Length = 499
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 27 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 86
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 87 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 146
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 147 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 206
Query: 189 ARR 191
+R
Sbjct: 207 QKR 209
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 388 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 446
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 499
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 107 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 165
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 166 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 210
>gi|74140245|dbj|BAE33820.1| unnamed protein product [Mus musculus]
Length = 486
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GA LFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGAYLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|395822451|ref|XP_003784531.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Otolemur
garnettii]
Length = 454
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|38570086|ref|NP_059064.2| CUGBP Elav-like family member 1 isoform 1 [Mus musculus]
gi|148695567|gb|EDL27514.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Mus
musculus]
Length = 513
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|149022602|gb|EDL79496.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 513
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|354469942|ref|XP_003497371.1| PREDICTED: CUGBP Elav-like family member 1-like [Cricetulus
griseus]
Length = 513
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|344247846|gb|EGW03950.1| CUG-BP- and ETR-3-like factor 1 [Cricetulus griseus]
Length = 514
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 403 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 461
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|32482067|gb|AAP84390.1| FCA protein [Triticum aestivum]
Length = 735
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +E+KLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEYKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|326920382|ref|XP_003206453.1| PREDICTED: CUGBP Elav-like family member 1-like [Meleagris
gallopavo]
Length = 487
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSPFGQI 133
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 193
Query: 190 RR 191
+R
Sbjct: 194 KR 195
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 151
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 152 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 196
>gi|145306680|gb|ABP57104.1| CUG binding protein 1 [Gallus gallus]
Length = 487
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSPFGQI 133
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 193
Query: 190 RR 191
+R
Sbjct: 194 KR 195
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 151
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 152 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 196
>gi|431893701|gb|ELK03522.1| CUG-BP- and ETR-3-like factor 6 [Pteropus alecto]
Length = 505
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 119/188 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 14 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 74 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 133
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 134 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 193
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 194 RMQQMAGQ 201
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 413 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 472
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 473 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 505
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 20 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 79
>gi|32482112|gb|AAP84408.1| FCA protein [Triticum aestivum]
Length = 741
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 123 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 182
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 183 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 242
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G P +V++AD ++ R
Sbjct: 243 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPSIVRFADPKRPR 298
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 113 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 169
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 170 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 208
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 125 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 184
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 185 HNQCTIPGAMGPVQVR 200
>gi|410931355|ref|XP_003979061.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 378
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + +V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS YG I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRLMFSPYGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 76/107 (71%)
Query: 329 NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 388
N S S G G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T
Sbjct: 272 NNLLSVSRGVIDGVLFAGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTN 331
Query: 389 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 332 LSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 378
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + + M+ + + +
Sbjct: 179 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKR----MVQQLQQQMQQL 234
Query: 121 ALFSIYGTIKDLQIL 135
+ SI+G + L L
Sbjct: 235 SAASIWGNLTGLNSL 249
>gi|348545316|ref|XP_003460126.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 2
[Oreochromis niloticus]
Length = 485
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 139/226 (61%), Gaps = 6/226 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV SR+ A
Sbjct: 14 DAIKMFVGQIPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYSRKSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGS 234
+R + Q +A S +L G +G P Y +Q++ +
Sbjct: 194 QKRMAQQLQQQMQQLSAASMWGNLTGLNSLG--PQYLALLHQSAST 237
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 388 SAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 447
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 448 YDNPVSSQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRM 197
>gi|18858491|ref|NP_571688.1| CUGBP Elav-like family member 1 [Danio rerio]
gi|82247731|sp|Q9IBD0.1|CELF1_DANRE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=EDEN-BP/Bruno-like protein; AltName:
Full=RNA-binding protein BRUNOL-2
gi|7670538|dbj|BAA95119.1| brul [Danio rerio]
Length = 501
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLF+GM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMG 219
+R + Q NA S +L G +G
Sbjct: 194 QKRIAQQLQQQMQQLNAASMWGNLTGLNSLG 224
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 404 SAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 463
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 464 YDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLFVG + K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|32482096|gb|AAP84401.1| FCA protein [Triticum aestivum]
Length = 735
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER + HKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIGHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|426245410|ref|XP_004016504.1| PREDICTED: CUGBP Elav-like family member 1 [Ovis aries]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQSLLTQQSVG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|71164871|ref|NP_001020767.1| CUGBP Elav-like family member 1 isoform 3 [Homo sapiens]
gi|17374605|sp|Q92879.2|CELF1_HUMAN RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Bruno-like protein 2; AltName:
Full=CUG triplet repeat RNA-binding protein 1;
Short=CUG-BP1; AltName: Full=CUG-BP- and ETR-3-like
factor 1; AltName: Full=Deadenylation factor CUG-BP;
AltName: Full=Embryo deadenylation element-binding
protein homolog; Short=EDEN-BP homolog; AltName:
Full=RNA-binding protein BRUNOL-2
gi|8745535|gb|AAF78955.1|AF267533_1 CUG-binding protein LYLQ isoform [Homo sapiens]
gi|9246973|gb|AAF86230.1|AF248648_1 RNA-binding protein BRUNOL2 [Homo sapiens]
gi|12053580|emb|CAC20566.1| deadenylation factor CUG-BP [Homo sapiens]
gi|119588315|gb|EAW67909.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|119588318|gb|EAW67912.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|387539216|gb|AFJ70235.1| CUGBP Elav-like family member 1 isoform 3 [Macaca mulatta]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|119588312|gb|EAW67906.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Homo
sapiens]
Length = 487
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|432090407|gb|ELK23833.1| CUGBP Elav-like family member 1 [Myotis davidii]
Length = 513
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKSNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKSNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|5729794|ref|NP_006551.1| CUGBP Elav-like family member 1 isoform 1 [Homo sapiens]
gi|402893570|ref|XP_003909965.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Papio anubis]
gi|1518802|gb|AAC50895.1| CUG-BP/hNab50 [Homo sapiens]
gi|119588313|gb|EAW67907.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Homo
sapiens]
gi|380783235|gb|AFE63493.1| CUGBP Elav-like family member 1 isoform 1 [Macaca mulatta]
gi|410222890|gb|JAA08664.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 482
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 371 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 429
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 430 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|194217895|ref|XP_001492139.2| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Equus
caballus]
gi|345783918|ref|XP_533186.3| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Canis lupus
familiaris]
gi|410973721|ref|XP_003993296.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Felis catus]
Length = 482
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 371 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 429
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 430 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|338712050|ref|XP_003362651.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 3 [Equus
caballus]
gi|410973719|ref|XP_003993295.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Felis catus]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|281340493|gb|EFB16077.1| hypothetical protein PANDA_010600 [Ailuropoda melanoleuca]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|338717391|ref|XP_003363632.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Equus caballus]
Length = 540
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 118/188 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 146 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 205
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 206 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 265
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LV+K ADT++ER R
Sbjct: 266 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVIKLADTDRERALR 325
Query: 191 RAQKAQSQ 198
R Q Q
Sbjct: 326 RMQXMSGQ 333
>gi|155372145|ref|NP_001094682.1| CUGBP Elav-like family member 1 [Bos taurus]
gi|154425935|gb|AAI51434.1| CUGBP1 protein [Bos taurus]
gi|296479665|tpg|DAA21780.1| TPA: CUG triplet repeat, RNA-binding protein 1 [Bos taurus]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLAQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|431915767|gb|ELK16100.1| CUG-BP- and ETR-3-like factor 1 [Pteropus alecto]
Length = 513
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|383415257|gb|AFH30842.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939406|gb|AFI33308.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384944856|gb|AFI36033.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410222888|gb|JAA08663.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259328|gb|JAA17630.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259330|gb|JAA17631.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298512|gb|JAA27856.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298514|gb|JAA27857.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357300|gb|JAA44561.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357302|gb|JAA44562.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357304|gb|JAA44563.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 513
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|119588314|gb|EAW67908.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Homo
sapiens]
gi|355566554|gb|EHH22933.1| hypothetical protein EGK_06290 [Macaca mulatta]
gi|355752163|gb|EHH56283.1| hypothetical protein EGM_05659 [Macaca fascicularis]
Length = 514
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 403 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 461
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|395815679|ref|XP_003781352.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 482
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 371 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 429
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 430 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|441646598|ref|XP_004090758.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|383415255|gb|AFH30841.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939404|gb|AFI33307.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|387540328|gb|AFJ70791.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410259332|gb|JAA17632.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298516|gb|JAA27858.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357404|gb|JAA44564.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 509
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 398 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 456
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 457 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|148706789|gb|EDL38736.1| trinucleotide repeat containing 4, isoform CRA_b [Mus musculus]
Length = 467
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 21 QVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK 80
Q+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +A H +K
Sbjct: 15 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQK 74
Query: 81 TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
TLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG
Sbjct: 75 TLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDG 133
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 134 TSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 191
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 377 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 436
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 437 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 467
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 97 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 153
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 154 NTLHSSRTLPGASSSLVVKFADTEKER 180
>gi|71980775|ref|NP_492958.3| Protein UNC-75 [Caenorhabditis elegans]
gi|33469616|gb|AAQ19851.1| putative RNA-binding protein [Caenorhabditis elegans]
gi|38422759|emb|CAB03896.4| Protein UNC-75 [Caenorhabditis elegans]
Length = 514
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 129/215 (60%), Gaps = 13/215 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E I+KDK T +GC F+ R A +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRC 86
Query: 73 VNACHNKKTLPGASSPLQVKYADGE------LERLEHK-LFIGMLPKNVSEAEVSALFSI 125
H++KTLPG + +QVK AD + ++++ K LFIGML K SE EV ALF+
Sbjct: 87 QATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFAT 146
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G + ++ +LRG+ SKGCAF+KY+ A A+ A++G M G+S LVVK+ADTEK
Sbjct: 147 FGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMPGASSSLVVKYADTEK 206
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGY 220
ERQ RR Q+ +Q L +P L + M Y
Sbjct: 207 ERQNRRMQQMAAQMGML------NPMLVNQVGMQY 235
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
++ GP G NLFIYH+PQEFGD EL F FG ++SAKVFVD+AT SKCFGFVSY++
Sbjct: 422 EVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIH 481
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
S+Q AI MNG Q+G K+LKVQLKR +++PY
Sbjct: 482 SSQAAITAMNGFQIGMKRLKVQLKRPRNESRPY 514
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E ++ A+F F +DEV +++ AS+GC FV +
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADG-ASKGCAFVKYKHGLD 176
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A++A H +T+PGASS L VKYAD E ER ++
Sbjct: 177 AHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
++S+S +G ++ P LF+ IP+ +++L + F+ FG++ + DK TG+
Sbjct: 10 ASSTSSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMH 69
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 434
K F++Y SA A ++ + L G +Q+K + ++P
Sbjct: 70 KGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTDSRP 114
>gi|348558646|ref|XP_003465128.1| PREDICTED: CUGBP Elav-like family member 1-like [Cavia porcellus]
Length = 513
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|32482085|gb|AAP84397.1| FCA protein [Triticum aestivum]
Length = 740
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 123 AKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYTTSEEAERAIR 182
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 183 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 242
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V +AD ++ R
Sbjct: 243 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVLFADPKRPR 298
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 408
A LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI
Sbjct: 123 AKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYTTSEEAERAIR 182
Query: 409 AMMNGCQLGGKKLKVQLK 426
A+ N C + G VQ++
Sbjct: 183 ALHNQCTIPGAMGPVQVR 200
>gi|281203518|gb|EFA77718.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 341
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 149/270 (55%), Gaps = 16/270 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K+FVG +P E +L +F++F + ++IIKDK T +GC F+ +++EAD A+N
Sbjct: 14 KVFVGHIPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLAINT 73
Query: 76 CHNKKTLPG-ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
++ G + PLQVKY+D E+E++E KLFIGML + E V+++F YG I++L I
Sbjct: 74 VNSSNQFLGDVTKPLQVKYSDNEIEKMERKLFIGMLG-SADEDTVTSVFGKYGAIEELTI 132
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+R + KG F+K+ +E+A A+ ++GKH GSS+PL+VK+ADTE++++ ++
Sbjct: 133 VREKEGRPKGYGFIKFSAREEAEDAIRELDGKHTFAGSSIPLIVKFADTERQKRKKQLMN 192
Query: 195 AQSQANNLP----NADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
Q+Q N N Q P+ PM Y N + +Q + + P + QP
Sbjct: 193 TQTQPQNTWGGGGNNFYQQPNQ-QQFPM-YYDNMNMHQHQVNNN--------PFQRYQPR 242
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
+ Q N + S DL P+NY
Sbjct: 243 STNVYQMNQQYNEFQQESSDLFIYYLPQNY 272
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 31/341 (9%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEA 162
K+F+G +P + E E+S +F +G I ++ I++ + KGCAF+ + TKE+A A+
Sbjct: 14 KVFVGHIPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLAINT 73
Query: 163 INGKHKMEGS-SVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQH-PSLFG------ 214
+N ++ G + PL VK++D E E+ R+ L +AD S+FG
Sbjct: 74 VNSSNQFLGDVTKPLQVKYSDNEIEKMERKLFIGM-----LGSADEDTVTSVFGKYGAIE 128
Query: 215 --ALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHG----IIPPVNQGNAMRGAS 268
+ GYG+ + + + + + F G +I +
Sbjct: 129 ELTIVREKEGRPKGYGFIKFSAREEAEDAIRELDGKHTFAGSSIPLIVKFADTERQKRKK 188
Query: 269 PDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVAN 327
+++ P+N G G+ + P Q +PM Y + +NN+P
Sbjct: 189 QLMNTQTQPQN----TWGGGGNNFYQQPNQQQFPMYYDNMNMHQHQVNNNP------FQR 238
Query: 328 SNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 387
P +++ ++LFIY++PQ +GD EL FQ +G V+SAKVF+DKAT
Sbjct: 239 YQPRSTNVYQMNQQYNEFQQESSDLFIYYLPQNYGDLELKMLFQTYGNVISAKVFIDKAT 298
Query: 388 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
SKCFGFV+Y++P SA NAI +NG + GKKLKV K++
Sbjct: 299 NQSKCFGFVTYDNPQSALNAINDLNGFAIEGKKLKVNFKKE 339
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
G +F+ HIP F ++EL F+ FG +L+ + DK T V K F+S+ + A AI
Sbjct: 12 GFKVFVGHIPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLAI 71
Query: 409 AMMN 412
+N
Sbjct: 72 NTVN 75
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 83 PGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQT 141
P +++ Q+ E ++ LFI LP+N + E+ LF YG + ++ + +
Sbjct: 241 PRSTNVYQMNQQYNEFQQESSDLFIYYLPQNYGDLELKMLFQTYGNVISAKVFIDKATNQ 300
Query: 142 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
SK F+ Y+ + AL A+ +NG +EG + + K
Sbjct: 301 SKCFGFVTYDNPQSALNAINDLNG-FAIEGKKLKVNFK 337
>gi|324507732|gb|ADY43273.1| CUGBP Elav family member 1-A [Ascaris suum]
gi|324510717|gb|ADY44479.1| CUGBP Elav family member 1-A, partial [Ascaris suum]
Length = 594
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 119/179 (66%), Gaps = 1/179 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E + +F++F V ++N+++DKTT+ASRGCCFV R +A A
Sbjct: 35 DTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTFYRRADAIAA 94
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E +V A+F+ +G I+D
Sbjct: 95 QAALHNIRVLPQMHHPVQMKPADSE-NRNERKLFVGMLNKRLTEEDVKAMFAHFGHIEDC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+L+ S S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE++A++
Sbjct: 154 TVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEKEAKK 212
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Query: 325 VANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVD 384
V + P+ S T SGGQ +GP G NLFIYH+PQ+F D +L F FG +LSAKVF+D
Sbjct: 468 VNAATPTMSVVTSTTSGGQSKGPDGCNLFIYHLPQDFADSDLVTTFSPFGNILSAKVFID 527
Query: 385 KATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
K T +SKCFGFVSY++ SAQNAIA +NG Q+G K+LKVQLKR K +KPY
Sbjct: 528 KQTNLSKCFGFVSYDNAVSAQNAIAALNGFQIGSKRLKVQLKR-GKDSKPY 577
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +TE + AMF F +++ ++KD + SRGC FV +R
Sbjct: 117 DSENRNER-KLFVGMLNKRLTEEDVKAMFAHFGHIEDCTVLKDSDGK-SRGCAFVTFANR 174
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
A +A+ H+ +T+ G S+P+ VK+AD + E+ E K +G
Sbjct: 175 SYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEK-EAKKTVG 215
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
P +F+ IP+ +G+QE F+ FG V V DK T S+ FV++
Sbjct: 34 PDTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTF 85
>gi|281211191|gb|EFA85357.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 515
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEF-ALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
+KLFVGQ+PK E L +MF ++ + E+++I++K T +GC FV S+ +A+KA+
Sbjct: 3 IKLFVGQIPKSFNEDNLKSMFADYEGSIQEISVIRNKQTNEPQGCAFVTLSSKDDAEKAI 62
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
H+ K PG S+ LQVKYAD E E+ KLF+GMLP+ E ++ LF+ YG ++D+
Sbjct: 63 QTLHSSKKFPGVSNSLQVKYADSEQEKQSTKLFVGMLPRTYQEDDIKTLFADYGEVEDIC 122
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+LRG+ SKGC F++++ +E L+A+ A+NG + + S LVVK+ADTE
Sbjct: 123 LLRGNNNESKGCGFIRFQNRESCLSAISALNGIN-LPPSPNNLVVKFADTE 172
>gi|410930632|ref|XP_003978702.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 376
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 123/183 (67%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + +V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + + M+ + + +
Sbjct: 153 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKR----MVQQLQQQMQQL 208
Query: 121 ALFSIYGTIKDLQIL 135
+ SI+G + L L
Sbjct: 209 SAASIWGNLTGLNSL 223
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 393 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 334 LGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 376
>gi|348576693|ref|XP_003474121.1| PREDICTED: CUGBP Elav-like family member 4-like [Cavia porcellus]
Length = 477
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ C +
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLYCTRHSASV 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTI 129
H +LPG + P+QVK AD E + KLF+GML K SE +V LF +G I
Sbjct: 110 TTQVLLHGAPSLPGMNRPIQVKPADSESRGGKDRKLFVGMLNKQQSEDDVRRLFEAFGNI 169
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER
Sbjct: 170 EECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTM 229
Query: 190 RRAQKAQSQ 198
RR Q+ Q
Sbjct: 230 RRMQQMAGQ 238
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 17/124 (13%)
Query: 327 NSNPSTSSSGGT-GSGGQIEG---PPG------------ANLFIYHIPQEFGDQELGNAF 370
N++ ST+ GG+ GS G + G PG LFI IP+ +++L F
Sbjct: 15 NASLSTNGLGGSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 74
Query: 371 QAFGRVLSAKVFVDKATGVSK-CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429
+ FG++ V D+ TG+ K C AS + + L G +Q+K +
Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLYCTRHSASVTTQVLLHGAPSLPGMNRPIQVKPAD 134
Query: 430 KQNK 433
+++
Sbjct: 135 SESR 138
>gi|149632715|ref|XP_001509363.1| PREDICTED: CUGBP Elav-like family member 1 [Ornithorhynchus
anatinus]
Length = 513
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRSMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRSMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 224
>gi|268561214|ref|XP_002646391.1| C. briggsae CBR-UNC-75 protein [Caenorhabditis briggsae]
Length = 550
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 123/197 (62%), Gaps = 7/197 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E I+KDK T +GC F+ R A +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTFCHRDSAQRC 86
Query: 73 VNACHNKKTLPGASSPLQVKYADGE------LERLEHK-LFIGMLPKNVSEAEVSALFSI 125
H++KTLPG + +QVK AD + ++++ K LFIGML K SE +V LF+
Sbjct: 87 QTTLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDDVRTLFAA 146
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G + ++ +LRG+ SKGCAF+KY++ A A+ A++G M G+S LVVK+ADTEK
Sbjct: 147 FGELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQTMPGASSSLVVKYADTEK 206
Query: 186 ERQARRAQKAQSQANNL 202
ERQ RR Q+ +Q L
Sbjct: 207 ERQNRRMQQMAAQMGML 223
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 72/94 (76%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
G + GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVSY++
Sbjct: 457 GSMLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHVVSAKVFVDRATNQSKCFGFVSYDNI 516
Query: 402 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
S+Q AIA MNG Q+G K+LKVQLKR + ++PY
Sbjct: 517 HSSQAAIAAMNGFQIGMKRLKVQLKRPREASRPY 550
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E + +F F +DEV +++ AS+GC FV S +
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDDVRTLFAAFGELDEVTVLRG-ADGASKGCAFVKYKSGFD 176
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A++A H +T+PGASS L VKYAD E ER ++
Sbjct: 177 AHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
++S+S +G ++ LF+ IP+ +++L + F+ FG++ + DK TG+
Sbjct: 10 ASSTSSTDSNGFPVKDADAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMH 69
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 434
K F+++ SAQ ++ + L G +Q+K + ++P
Sbjct: 70 KGCAFLTFCHRDSAQRCQTTLHDQKTLPGMNRAMQVKPADTDSRP 114
>gi|194385764|dbj|BAG65257.1| unnamed protein product [Homo sapiens]
Length = 468
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 119/178 (66%), Gaps = 3/178 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKAVN 74
+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A N
Sbjct: 1 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 60
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
A HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I++ +
Sbjct: 61 ALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECR 120
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 121 ILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 178
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 357 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 415
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 416 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 468
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 77 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 134
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 135 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 179
>gi|417411512|gb|JAA52190.1| Putative rna-binding protein etr-3 rrm superfamily, partial
[Desmodus rotundus]
Length = 541
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 69 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 128
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 129 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 188
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 189 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 248
Query: 189 ARR 191
+R
Sbjct: 249 QKR 251
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 430 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 488
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 541
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 149 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 207
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 208 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 252
>gi|308465068|ref|XP_003094796.1| CRE-UNC-75 protein [Caenorhabditis remanei]
gi|308246879|gb|EFO90831.1| CRE-UNC-75 protein [Caenorhabditis remanei]
Length = 491
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 121/197 (61%), Gaps = 7/197 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E I+KDK T +GC F+ R A +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTFCHRDSAQRC 86
Query: 73 VNACHNKKTLPGASSPLQVKYADGEL-------ERLEHKLFIGMLPKNVSEAEVSALFSI 125
H++KTLPG + +QVK AD + + + KLFIGML K SE +V LF+
Sbjct: 87 QTTLHDQKTLPGMNRAMQVKPADTDSRPASPKDKADDKKLFIGMLSKQQSEDDVRTLFAA 146
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G + ++ +LRG+ SKGCAF+KY++ A A+ A++G M G+S LVVK+ADTEK
Sbjct: 147 FGELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQTMPGASSSLVVKYADTEK 206
Query: 186 ERQARRAQKAQSQANNL 202
ERQ RR Q+ +Q L
Sbjct: 207 ERQNRRMQQMAAQMGML 223
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
++ GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVSY++
Sbjct: 399 EVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHVVSAKVFVDRATNQSKCFGFVSYDNIH 458
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
S+Q AIA MNG Q+G K+LKVQLKR + +PY
Sbjct: 459 SSQAAIAAMNGFQIGMKRLKVQLKRPRESARPY 491
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E + +F F +DEV +++ AS+GC FV S +
Sbjct: 118 KDKADDKKLFIGMLSKQQSEDDVRTLFAAFGELDEVTVLRG-ADGASKGCAFVKYKSGFD 176
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A++A H +T+PGASS L VKYAD E ER ++
Sbjct: 177 AHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
++S+S +G ++ P LF+ IP+ +++L + F+ FG++ + DK TG+
Sbjct: 10 ASSTSSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMH 69
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 434
K F+++ SAQ ++ + L G +Q+K + ++P
Sbjct: 70 KGCAFLTFCHRDSAQRCQTTLHDQKTLPGMNRAMQVKPADTDSRP 114
>gi|355677605|gb|AER96037.1| CUG triplet repeat, RNA binding protein 1 [Mustela putorius furo]
Length = 540
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 69 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 128
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 129 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 188
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 189 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 248
Query: 189 ARR 191
+R
Sbjct: 249 QKR 251
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 430 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 488
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KP
Sbjct: 489 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKP 540
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 149 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 207
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 208 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 252
>gi|32482130|gb|AAP84415.1| FCA protein, partial [Triticum aestivum]
Length = 743
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 126 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 185
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 186 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIGEIFAPFGHVED 245
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+G F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 246 VYIMKDGMRQSRGSGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 301
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 128 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 187
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 188 HNQCTIPGAMGPVQVR 203
>gi|395543757|ref|XP_003773780.1| PREDICTED: CUGBP Elav-like family member 1 [Sarcophilus harrisii]
Length = 513
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 224
>gi|32482118|gb|AAP84411.1| FCA protein, partial [Triticum aestivum]
Length = 736
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+ + T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRGRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 AQHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGAYIMRGCEQPLIVRFADPKRPR 295
>gi|32482369|gb|AAP84377.1| FCA protein [Triticum aestivum]
Length = 727
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +G CFV + +EA++A+
Sbjct: 114 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGRCFVKYATSEEAERAIR 173
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 174 ALHNQCTIPGAMGPVQVRYADGERERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 233
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 234 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 289
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 116 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGRCFVKYATSEEAERAIRAL 175
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 176 HNQCTIPGAMGPVQVR 191
>gi|355692855|gb|EHH27458.1| CUGBP Elav-like family member 6, partial [Macaca mulatta]
Length = 389
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 31 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 90
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 91 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 150
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 151 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 210
Query: 191 RAQK 194
R Q+
Sbjct: 211 RMQQ 214
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 297 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 356
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 357 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 389
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 37 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 96
>gi|410977611|ref|XP_003995197.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Felis catus]
Length = 482
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 117/189 (61%), Gaps = 1/189 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC + +R A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCALLSFCARDAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTI 129
K+ A H ++ LP + P+QVK AD E + KLF+GML K SE +V LF +G I
Sbjct: 110 KSQTALHRQEVLPXMNRPIQVKPADSESRGGKDRKLFVGMLNKQQSEDDVRRLFEAFGNI 169
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER
Sbjct: 170 EECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTM 229
Query: 190 RRAQKAQSQ 198
RR Q+ Q
Sbjct: 230 RRMQQMAGQ 238
>gi|387916084|gb|AFK11651.1| CUGBP Elav-like family member 2 isoform 2 [Callorhinchus milii]
Length = 513
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 141/229 (61%), Gaps = 5/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ TE +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 44 DAIKMFVGQIPRSWTEKELKELFEPYGAVHQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 103
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 104 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 163
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 164 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 223
Query: 189 ARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAPPYNGYGYQASGSYG 236
RR Q+ +Q N+ + + + GAL Y +G + SG G
Sbjct: 224 QRRLQQQLAQQMQQLNSATWGNLTGLGALGPQYLAVSGQWGTKTSGEMG 272
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 416 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 475
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 476 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 124 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 182
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 183 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 222
>gi|32482367|gb|AAP84376.1| FCA protein [Triticum aestivum]
Length = 735
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GC FV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCRFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCRFVKYATSEEAERAIRAL 179
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|35903017|ref|NP_919382.1| CUGBP Elav-like family member 2 [Danio rerio]
gi|19909954|dbj|BAB87828.1| elav-type ribonucleoprotein-3 [Danio rerio]
Length = 486
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 194 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL 240
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 389 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 448
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 449 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 486
>gi|82237387|sp|Q6P0B1.1|CELF2_DANRE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|41351000|gb|AAH65686.1| Cugbp2 protein [Danio rerio]
Length = 514
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 42 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 102 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 161
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 162 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 221
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 222 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL 268
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 476
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|66825827|ref|XP_646268.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60474730|gb|EAL72667.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 368
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FVG +P M E + +F +F + ++ IIKDK T S+GC F+ +++EAD A+N
Sbjct: 20 VFVGHIPSSMNEEGVSQIFNKFGNILDITIIKDKRTNVSKGCAFITFSTKEEADNALNTT 79
Query: 77 HNKKT-LPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
+ T L + PLQVKY+D E+E++E KLFIGML + E ++ LF YG I+DL I+
Sbjct: 80 NESGTFLENMNKPLQVKYSDNEIEKMERKLFIGMLGTS-DEDQIRILFGNYGIIEDLNIV 138
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
R KG F+KY T++++ AL I+GKH + GS++P++VK+ADTE++++ +
Sbjct: 139 REKDGKPKGYGFIKYSTRDESENALREIDGKHTLPGSNLPIIVKFADTERQKRKK 193
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
+LFIY++P +GD+EL F +G V+S+KVF+DK T SKCFGFVSY++ SA AI
Sbjct: 288 DLFIYYLPFTYGDEELKQLFAPYGNVISSKVFIDKNTQQSKCFGFVSYDNTQSAIAAIQE 347
Query: 411 MNGCQLGGKKLKVQLKRD 428
+NG + GKKLKV KR+
Sbjct: 348 LNGRAIEGKKLKVNFKRE 365
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
G +F+ HIP ++ + F FG +L + DK T VSK F+++ + A NA+
Sbjct: 17 GFTVFVGHIPSSMNEEGVSQIFNKFGNILDITIIKDKRTNVSKGCAFITFSTKEEADNAL 76
Query: 409 AMMN 412
N
Sbjct: 77 NTTN 80
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQTSKGCAFLKYETKEQALAALE 161
+ LFI LP + E+ LF+ YG + ++ + + Q SK F+ Y+ + A+AA++
Sbjct: 287 NDLFIYYLPFTYGDEELKQLFAPYGNVISSKVFIDKNTQQSKCFGFVSYDNTQSAIAAIQ 346
Query: 162 AINGKHKMEGSSVPLVVK 179
+NG+ +EG + + K
Sbjct: 347 ELNGR-AIEGKKLKVNFK 363
>gi|32482392|gb|AAP84385.1| FCA protein [Triticum aestivum]
Length = 738
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFVGSVPRTANEDDARPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
HN+ T+PGA P+QV+YADGE ER +EHKLF+ L + + E+ +F+ +G ++D
Sbjct: 182 TLHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNRQATAKEIEEIFAPFGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMGGCEQPLIVRFADPKRLR 297
>gi|37588904|gb|AAH04145.2| TNRC4 protein, partial [Homo sapiens]
Length = 291
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 21 QVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK 80
Q+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +A H +K
Sbjct: 5 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQK 64
Query: 81 TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
TLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG
Sbjct: 65 TLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDG 123
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 124 TSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 181
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 87 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 143
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 NTLHSSRTLPGASSSLVVKFADTEKER 170
>gi|351708216|gb|EHB11135.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 513
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
++ +ILRG S+G CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFVPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ + GC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|152013389|sp|Q5F3T7.2|CELF1_CHICK RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
Length = 489
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 378 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 436
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 437 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|449274607|gb|EMC83685.1| CUG-BP- and ETR-3-like factor 1 [Columba livia]
Length = 515
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 404 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 462
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 463 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 515
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 224
>gi|380807355|gb|AFE75553.1| CUGBP Elav-like family member 6 isoform 1, partial [Macaca mulatta]
Length = 226
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 116/180 (64%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A KA +
Sbjct: 45 IKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQS 104
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I++ +
Sbjct: 105 ALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTV 164
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 165 LRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 224
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 407
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 46 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 105
Query: 408 I 408
+
Sbjct: 106 L 106
>gi|32482385|gb|AAP84382.1| FCA protein [Triticum aestivum]
Length = 700
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG P+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 105 VKLFVGSAPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 164
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+ ADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 165 ALHNQCTIPGAMGPVQVRCADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 224
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 225 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 280
>gi|148224750|ref|NP_001079970.1| CUGBP Elav-like family member 1-B [Xenopus laevis]
gi|47123025|gb|AAH70706.1| Cugbp1-b protein [Xenopus laevis]
Length = 529
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 133/219 (60%), Gaps = 17/219 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 41 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGE-----LERL---EH-------KLFIGMLPKNVS 115
+A NA HN K LPG P+Q+K AD E L + EH KLFIGM+ K +
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNGGLNTVLFPEHPASVEDRKLFIGMVSKKCN 160
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E ++ LFS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P
Sbjct: 161 ENDIRTLFSQFGQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSP 220
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFG 214
+VVK+ADT+K+++ +R + Q NA S +L G
Sbjct: 221 IVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLAG 259
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 329 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 387
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T
Sbjct: 422 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQT 481
Query: 388 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SKCFGF+SY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 482 NLSKCFGFISYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 529
>gi|32482127|gb|AAP84414.1| FCA protein [Triticum aestivum]
Length = 740
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 119/187 (63%), Gaps = 5/187 (2%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
S + KSS VKL VG VP+ E + +F++ V EV +I+D+ T +GCCFV
Sbjct: 115 SDHDNKSS--YVKLIVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKY 172
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVS 120
+ +E + A+ A HN+ T+PGA P+QV+Y DGE ER +EHKLF+ L K + E+
Sbjct: 173 ATSEETESAIRALHNQCTIPGAMGPVQVRYTDGEKERHGSIEHKLFVASLNKQATAKEIE 232
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+F+ +G ++D+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++
Sbjct: 233 EIFAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRF 292
Query: 181 ADTEKER 187
AD ++ R
Sbjct: 293 ADPKRPR 299
>gi|119588316|gb|EAW67910.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_e [Homo
sapiens]
Length = 283
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|440911412|gb|ELR61086.1| CUGBP Elav-like family member 4 [Bos grunniens mutus]
Length = 487
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 11/199 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACH-NKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEV 119
KA +A H ++K L G + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHADEKHLGGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDV 169
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK
Sbjct: 170 RRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVK 229
Query: 180 WADTEKERQARRAQKAQSQ 198
+ADT+KER RR Q+ Q
Sbjct: 230 FADTDKERTMRRMQQMAGQ 248
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNK 433
+ LGG +Q+K + +++
Sbjct: 116 -HADEKHLGGMNRPIQVKPADSESR 139
>gi|410908161|ref|XP_003967559.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 6 [Takifugu
rubripes]
Length = 538
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 449 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 508
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 509 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 538
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|47224440|emb|CAG08690.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 16 DAIKMFVGQIPRSWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 75
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 76 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 135
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 136 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 195
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 75/122 (61%), Gaps = 26/122 (21%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF------ 393
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCF
Sbjct: 394 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGECVLC 453
Query: 394 --------------------GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +K
Sbjct: 454 SASAPQRSLLRRLKRLSCSSGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSK 513
Query: 434 PY 435
PY
Sbjct: 514 PY 515
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 96 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 154
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 155 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 194
>gi|410908159|ref|XP_003967558.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 5 [Takifugu
rubripes]
Length = 490
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 401 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 460
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|410908151|ref|XP_003967554.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 530
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY+
Sbjct: 435 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYD 494
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 530
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|294946457|ref|XP_002785076.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
gi|239898488|gb|EER16872.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
Length = 430
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 204/435 (46%), Gaps = 67/435 (15%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADK 71
VKLFVG++P E ++ ++F + V+EV+II+ KT GC FV + QEA
Sbjct: 8 VKLFVGKLPCDWDEEEVRSLFGPYGDVEEVSIIRPKTNPGKGQKYGCAFVKYGAIQEAAA 67
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSAL 122
A+ K+T+ + PLQ++YA+GE ERL KLF+ +P +V +AE+ +
Sbjct: 68 AIQGMAGKQTVNENAGPLQIQYANGEPERLGLADDTEGVAQKLFVANVPADVDDAELKRV 127
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
FS YGT+ + ++ + AF+++ K L A++A+N K + P+ VK A+
Sbjct: 128 FSQYGTVTEAYCIQPRRPGGNRAAFVRFSKKSDGLRAIDALNEKFTFPNNDRPVAVKCAE 187
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
T ++R A R Q ++P + Q PS + GY P G ++G YG +
Sbjct: 188 TREQRDAHR------QDMDVPRSQQQQPSNRFSNDSGYGP-----GPTSTGGYGQRITPV 236
Query: 243 PPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPM 302
P QP G + LS + G Y +G Q+ +
Sbjct: 237 PTAAAQPRQAG------------DWTEYLSQSDGRYYYHNSRTG----------QTQWDV 274
Query: 303 PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG---------GQIEGPPGANLF 353
PY +G P + P P S G G G + +GP GAN+F
Sbjct: 275 PYEFQSMG------PPPTAVP------PQQDHSYGGGYGLMQTPRSQQQRRDGPMGANVF 322
Query: 354 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 413
+Y+IP E+ D +L F + G + + +V +D T SK +GFVS+ SA A+ M+G
Sbjct: 323 VYNIPPEWTDNDLVREFGSCGPLSTTRVIIDSQTNQSKGYGFVSFREVRSAMKAVETMDG 382
Query: 414 -CQLGGKKLKVQLKR 427
G++LKVQ+K+
Sbjct: 383 FLTSTGRRLKVQIKK 397
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK----GCAFLKYETKEQ 155
R+ KLF+G LP + E EV +LF YG ++++ I+R K GCAF+KY ++
Sbjct: 5 RIPVKLFVGKLPCDWDEEEVRSLFGPYGDVEEVSIIRPKTNPGKGQKYGCAFVKYGAIQE 64
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A AA++ + GK + ++ PL +++A+ E ER
Sbjct: 65 AAAAIQGMAGKQTVNENAGPLQIQYANGEPER 96
>gi|410908153|ref|XP_003967555.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 510
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 98 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 158 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 217
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY+
Sbjct: 415 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYD 474
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 475 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 510
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 118 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 177 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 216
>gi|390338611|ref|XP_781047.3| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 520
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 118/184 (64%), Gaps = 5/184 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F++F + E+ +++D+ T +GC F+ R+ A
Sbjct: 44 DHDAIKLFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAI 103
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A A H +KTLPG + LQVK AD E + KLF+GML K +E EV A+F+ +G I
Sbjct: 104 RAQKALHEQKTLPGMTRALQVKPADSESRGEDRKLFVGMLNKAQTEEEVRAMFTHFGKID 163
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ IL+ S+GCAF+K+ T+++A+ A+ +IN ++ LVVK+ADTEKERQ R
Sbjct: 164 ECTILKDPNGISRGCAFVKFSTRKEAVGAINSIN-----MSANPNLVVKFADTEKERQLR 218
Query: 191 RAQK 194
R Q+
Sbjct: 219 RMQQ 222
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 67/90 (74%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP G NLFIYH+PQEFGD EL F FG+V+S+KVFVD+ T SKCFGFVS+++P AQ
Sbjct: 431 GPEGCNLFIYHLPQEFGDAELTQMFVPFGQVISSKVFVDRVTNQSKCFGFVSFDNPQCAQ 490
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQ KR NKPY
Sbjct: 491 AAIQAMNGFQIGMKRLKVQHKRPKDANKPY 520
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K TE ++ AMF F +DE I+KD SRGC FV +R
Sbjct: 128 DSESRGEDRKLFVGMLNKAQTEEEVRAMFTHFGKIDECTILKDPNG-ISRGCAFVKFSTR 186
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL-----FIGMLPKNVSEAEVSA 121
+EA A+N+ + A+ L VK+AD E ER ++ +G+ ++ VS+
Sbjct: 187 KEAVGAINSINMS-----ANPNLVVKFADTEKERQLRRMQQMSNSMGLF----NQMAVSS 237
Query: 122 LFSIYG 127
S+YG
Sbjct: 238 PISLYG 243
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +++L F+ FGR+ V D+ TGV K F++Y ES AQ A+
Sbjct: 50 LFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIRAQKAL 109
>gi|410908157|ref|XP_003967557.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Takifugu
rubripes]
Length = 482
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY+
Sbjct: 387 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYD 446
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|444707599|gb|ELW48864.1| CUGBP Elav-like family member 1 [Tupaia chinensis]
Length = 487
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 121/184 (65%), Gaps = 5/184 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I++ +ILRG S+G CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K++
Sbjct: 134 IEECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 193
Query: 188 QARR 191
+ +R
Sbjct: 194 EQKR 197
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ + GC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGGCAF 153
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 154 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 198
>gi|395827353|ref|XP_003786869.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Otolemur
garnettii]
Length = 488
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|395827349|ref|XP_003786867.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Otolemur
garnettii]
Length = 490
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|395827351|ref|XP_003786868.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Otolemur
garnettii]
Length = 514
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|410908155|ref|XP_003967556.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 468
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 42 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 102 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 161
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 162 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 221
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY+
Sbjct: 373 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYD 432
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 433 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 468
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 122 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 180
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 181 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 220
>gi|395827347|ref|XP_003786866.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Otolemur
garnettii]
Length = 521
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|348513017|ref|XP_003444039.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 531
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+T S+GCCFV +R+ A
Sbjct: 58 DSIKMFVGQIPRSWSETELKELFEPFGAVHQINILRDRTQNPPQSKGCCFVTFYTRKAAL 117
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLF+GM+ K E EV +FS +G
Sbjct: 118 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFVGMVSKKYGENEVRMMFSSFGQ 177
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK+ADT+++++
Sbjct: 178 IEECRILRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKFADTQRDKE 237
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 74/96 (77%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQE GDQ+L F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 436 AGSQKEGPEGANLFIYHLPQECGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 495
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 496 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 531
>gi|340502339|gb|EGR29040.1| RNA binding protein, putative [Ichthyophthirius multifiliis]
Length = 316
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 173/367 (47%), Gaps = 74/367 (20%)
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSA 121
+A++A+ NK +LPG + +++K+AD E ERL +HKLF+G LPK +E +
Sbjct: 3 DAERAIADLKNK-SLPGMKNNIEIKWADNEEERLGVNQDSDHKLFVGSLPKTCTEQNIRD 61
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
+F +G I++L +++ SQ ++ AFLKY+ KE+A A+ +N + + S P+ V++A
Sbjct: 62 IFETFGEIEELHLMKDSQNNTRQ-AFLKYKLKEKAHLAIRNLNSQVYIGNSENPIEVRFA 120
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
E + ++ Q QAN +P S+ + ++
Sbjct: 121 KKYVESEHQKVQHKTEQAN---------------IPFV--------------SWQKIYFK 151
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP 301
NQP ++ P NQ R ++ L ++ S Y + Q
Sbjct: 152 YYTENNQPYYYH--PYTNQSTYERPSTGSLIHDVDG-----------SSEYIELNSKQLL 198
Query: 302 MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF 361
MP P V N G+ GPPG+NLFI+H+P +F
Sbjct: 199 MP----------------KNEPFVINDRKDVYD-------GKKHGPPGSNLFIFHLPTDF 235
Query: 362 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 421
D +L F FG V+SA+V + G SK FGF+SY S A++AI +NG QL K+L
Sbjct: 236 RDSDLERMFSQFGEVISARVNT-RPDGTSKGFGFISYNSAKEAEDAIRNLNGVQLKNKRL 294
Query: 422 KVQLKRD 428
KV++K++
Sbjct: 295 KVEIKKE 301
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK TE + +F+ F ++E++++KD + F+ +++A A+
Sbjct: 44 KLFVGSLPKTCTEQNIRDIFETFGEIEELHLMKDSQNNTRQ--AFLKYKLKEKAHLAIRN 101
Query: 76 CHNKKTLPGASSPLQV----KYADGELERLEHK 104
+++ + + +P++V KY + E ++++HK
Sbjct: 102 LNSQVYIGNSENPIEVRFAKKYVESEHQKVQHK 134
>gi|296206140|ref|XP_002750082.1| PREDICTED: CUGBP Elav-like family member 2 [Callithrix jacchus]
Length = 531
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 57 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 116
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 117 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 176
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 177 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 236
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 434 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 493
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 494 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 531
>gi|194375526|dbj|BAG56708.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 22 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 81
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 82 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 141
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 142 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 201
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 399 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 458
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 496
>gi|55731735|emb|CAH92572.1| hypothetical protein [Pongo abelii]
Length = 490
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 75/98 (76%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHPPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|351703688|gb|EHB06607.1| CUG-BP- and ETR-3-like factor 2, partial [Heterocephalus glaber]
Length = 496
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 20 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 80 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 139
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 140 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 199
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 399 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 458
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 496
>gi|134152719|ref|NP_001077060.1| CUGBP Elav-like family member 2 isoform 4 [Homo sapiens]
gi|332833595|ref|XP_003312502.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Pan
troglodytes]
gi|397515226|ref|XP_003827857.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Pan paniscus]
gi|403278085|ref|XP_003930659.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Saimiri
boliviensis boliviensis]
gi|16660677|gb|AAL27627.1|AF432906_1 neuroblastoma apoptosis-related RNA-binding protein isoform 4 [Homo
sapiens]
gi|119606752|gb|EAW86346.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|221046096|dbj|BAH14725.1| unnamed protein product [Homo sapiens]
gi|410263774|gb|JAA19853.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 488
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|294884849|gb|ADF47435.1| bruno-like protein [Dugesia japonica]
Length = 372
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 178/373 (47%), Gaps = 68/373 (18%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLFIGML KN SE +V L YG IK+ IL+ + + CAF+ + + ++A A+EA+
Sbjct: 11 KLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDA--YGQSCAFVTFNSSDEANIAIEAL 68
Query: 164 NG-KHKME----GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
NG K M GS++ V + AD ++ERQ R+ Q +P P G
Sbjct: 69 NGLKTSMACPELGSTI--VARLADNDQERQLRKMQMQ------IPAVQFLTPQNVGYYNQ 120
Query: 219 GYAP------PY--NGYGYQASGSYGLMQYR-------LPPMQN-------QPGF----- 251
G P P+ + +Y LM + PP+ N QP
Sbjct: 121 GIVPMILQQFPHATDQQTTNIINAYALMHFNQMYSPNLTPPIMNSSPSVTPQPQIGVPMS 180
Query: 252 -------------HGIIPPVNQG----NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPA 294
H +IP ++ N+ +P L N+ N++ P + + S Y
Sbjct: 181 ASNDISSNQCSINHYVIPAISNETLSPNSYINPNPQLI-NIANINFS-PEALHLSSLYSM 238
Query: 295 VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFI 354
P + + P G+ N P ++S T G S + GP G NLFI
Sbjct: 239 FPQCGFNINQPLGLSSQNVYQN-PATLSLQFQ----QTQKDGMKDSI--VTGPEGCNLFI 291
Query: 355 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 414
YH+PQ+FGD L F FG V+SAKV++D+AT SKCFGFVS+++ +SA+ AI MNG
Sbjct: 292 YHLPQDFGDTALAQLFAPFGNVISAKVYLDRATNQSKCFGFVSFDNASSAEGAIRGMNGF 351
Query: 415 QLGGKKLKVQLKR 427
Q+G K+LKVQLKR
Sbjct: 352 QIGTKRLKVQLKR 364
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
++ +E KLF+G + K+ +E + + + + + I+KD + C FV S E
Sbjct: 4 QNQDENAKLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDA---YGQSCAFVTFNSSDE 60
Query: 69 ADKAVNACHNKKT---LPGASSPLQVKYADGELERLEHKL 105
A+ A+ A + KT P S + + AD + ER K+
Sbjct: 61 ANIAIEALNGLKTSMACPELGSTIVARLADNDQERQLRKM 100
>gi|74142177|dbj|BAE31857.1| unnamed protein product [Mus musculus]
Length = 495
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 21 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 80
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 81 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 140
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 141 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 200
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EG GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 398 SAAGSQKEGTEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 457
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 458 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 495
>gi|159032035|ref|NP_001103700.1| CUGBP Elav-like family member 2 isoform 3 [Mus musculus]
gi|74227938|dbj|BAE37963.1| unnamed protein product [Mus musculus]
Length = 520
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 423 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 482
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 483 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 520
>gi|410918516|ref|XP_003972731.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 521
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ + SL G G P Y QA+ S L
Sbjct: 226 QRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALLQQAASSGNL 272
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 426 AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 485
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 486 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|159032039|ref|NP_001103702.1| CUGBP Elav-like family member 2 isoform 5 [Mus musculus]
gi|4249672|gb|AAD13763.1| apoptosis-related RNA binding protein [Mus musculus]
gi|120538103|gb|AAI29097.1| Cugbp2 protein [Rattus norvegicus]
Length = 484
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
>gi|441603563|ref|XP_003262134.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Nomascus leucogenys]
Length = 458
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 119/198 (60%), Gaps = 11/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R++A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCSFLSYCQREQA- 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA + H ++ LP + P+QVK AD E + KLF+GML K SE +V
Sbjct: 109 KAHSDMHKQEVLPXMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 168
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 169 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 228
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 229 ADTDKERTMRRMQQMAGQ 246
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
LFI IP+ +++L F+ FG++ V D+ TG+ K F+SY
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCSFLSY 102
>gi|197099692|ref|NP_001125976.1| CUGBP Elav-like family member 1 [Pongo abelii]
gi|75070672|sp|Q5R995.1|CELF1_PONAB RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|55729876|emb|CAH91665.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 119/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +IL G S+GCA + + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILWGPDGLSRGCALVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I+ SRGC
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILWGPDG-LSRGCAL 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|159032037|ref|NP_001103701.1| CUGBP Elav-like family member 2 isoform 4 [Mus musculus]
gi|3452501|emb|CAA09102.1| ETR-R3a protein [Rattus norvegicus]
gi|74144402|dbj|BAE36053.1| unnamed protein product [Mus musculus]
Length = 490
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|402879613|ref|XP_003903426.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Papio anubis]
gi|426363973|ref|XP_004049101.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Gorilla
gorilla gorilla]
gi|14701777|gb|AAK72223.1| neuroplastoma apoptosis-related RNA-binding protein 3 [Homo
sapiens]
gi|194390100|dbj|BAG61812.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
>gi|159032033|ref|NP_001103699.1| CUGBP Elav-like family member 2 isoform 2 [Mus musculus]
gi|74209492|dbj|BAE23295.1| unnamed protein product [Mus musculus]
Length = 524
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 427 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 486
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 487 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 524
>gi|1568643|gb|AAB09040.1| RNA-binding protein BRUNOL3 [Homo sapiens]
Length = 490
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 75/98 (76%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|410963195|ref|XP_003988151.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Felis catus]
Length = 484
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
>gi|348521218|ref|XP_003448123.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 483
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ + SL G G P Y QA+ S L
Sbjct: 194 QRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALLQQAASSGNL 240
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 388 AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 447
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 448 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 483
>gi|383415259|gb|AFH30843.1| CUGBP Elav-like family member 2 isoform 4 [Macaca mulatta]
Length = 488
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|74198996|dbj|BAE30715.1| unnamed protein product [Mus musculus]
Length = 488
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EG GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGTEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|410963193|ref|XP_003988150.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Felis catus]
Length = 496
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 22 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 81
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 82 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 141
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 142 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 201
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 399 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 458
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 496
>gi|354467968|ref|XP_003496439.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Cricetulus griseus]
Length = 520
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 423 SAAGSQKEGPEMANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 482
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 483 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 520
>gi|22137759|gb|AAH36391.1| CUGBP2 protein [Homo sapiens]
gi|119606753|gb|EAW86347.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 521
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|402879617|ref|XP_003903428.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Papio anubis]
Length = 533
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 436 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 495
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 496 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 533
>gi|194227176|ref|XP_001916706.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Equus
caballus]
gi|344277695|ref|XP_003410635.1| PREDICTED: CUGBP Elav-like family member 2-like [Loxodonta
africana]
gi|345793487|ref|XP_003433765.1| PREDICTED: CUGBP, Elav-like family member 2 [Canis lupus
familiaris]
Length = 488
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|14701786|gb|AAK72224.1| neuroplastoma apoptosis-related RNA-binding protein 2 [Homo
sapiens]
Length = 509
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
>gi|344239315|gb|EGV95418.1| CUG-BP- and ETR-3-like factor 2 [Cricetulus griseus]
Length = 508
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEMANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
>gi|119606755|gb|EAW86349.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 509
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
>gi|81911882|sp|Q792H5.1|CELF2_RAT RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=Protein ETR-R3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=rNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|81917931|sp|Q9Z0H4.1|CELF2_MOUSE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=mETR-3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=mNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|4249670|gb|AAD13762.1| apoptosis-related RNA binding protein [Rattus norvegicus]
gi|4249674|gb|AAD13764.1| apoptosis-related RNA binding protein [Mus musculus]
gi|20073073|gb|AAH26856.1| Cugbp2 protein [Mus musculus]
Length = 508
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
>gi|68303645|ref|NP_001020247.1| CUGBP Elav-like family member 2 isoform 1 [Homo sapiens]
gi|332833597|ref|XP_003312503.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Pan
troglodytes]
gi|397515224|ref|XP_003827856.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Pan paniscus]
gi|403278087|ref|XP_003930660.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Saimiri
boliviensis boliviensis]
gi|4104559|gb|AAD02074.1| neuroblastoma apoptosis-related RNA binding protein [Homo sapiens]
gi|15217394|gb|AAK92699.1| neuroplastoma apoptosis-related RNA-binding protein 1 [Homo
sapiens]
gi|119606754|gb|EAW86348.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_c [Homo
sapiens]
Length = 490
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|380808892|gb|AFE76321.1| CUGBP Elav-like family member 2 isoform 2 [Macaca mulatta]
Length = 515
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 418 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 477
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 478 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 515
>gi|4249668|gb|AAD13761.1| apoptosis-related RNA binding protein [Homo sapiens]
Length = 509
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 75/98 (76%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
>gi|332833593|ref|XP_003312501.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Pan
troglodytes]
gi|397515222|ref|XP_003827855.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Pan paniscus]
gi|403278083|ref|XP_003930658.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|380808894|gb|AFE76322.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
Length = 514
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|189054263|dbj|BAG36783.1| unnamed protein product [Homo sapiens]
Length = 509
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
>gi|73949074|ref|XP_849139.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Canis lupus
familiaris]
gi|338721615|ref|XP_003364409.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Equus
caballus]
Length = 484
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
>gi|410225364|gb|JAA09901.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263770|gb|JAA19851.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263772|gb|JAA19852.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305936|gb|JAA31568.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349365|gb|JAA41286.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 519
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 422 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 481
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 482 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 519
>gi|301787201|ref|XP_002929016.1| PREDICTED: CUGBP Elav-like family member 2-like [Ailuropoda
melanoleuca]
Length = 488
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|68303647|ref|NP_001020248.1| CUGBP Elav-like family member 2 isoform 3 [Homo sapiens]
gi|402879611|ref|XP_003903425.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Papio anubis]
gi|426363975|ref|XP_004049102.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Gorilla
gorilla gorilla]
gi|74754421|sp|O95319.1|CELF2_HUMAN RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=Neuroblastoma apoptosis-related
RNA-binding protein; Short=hNAPOR; AltName:
Full=RNA-binding protein BRUNOL-3
gi|152013391|sp|Q5R8Y8.2|CELF2_PONAB RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=RNA-binding protein BRUNOL-3
gi|4249666|gb|AAD13760.1| apoptosis-related RNA binding protein [Homo sapiens]
gi|119606756|gb|EAW86350.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_e [Homo
sapiens]
gi|380808896|gb|AFE76323.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|380808898|gb|AFE76324.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|410349367|gb|JAA41287.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 508
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
>gi|332833599|ref|XP_507653.3| PREDICTED: CUGBP, Elav-like family member 2 isoform 4 [Pan
troglodytes]
gi|410349369|gb|JAA41288.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 521
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|194388952|dbj|BAG61493.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|402879615|ref|XP_003903427.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Papio anubis]
Length = 521
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|410225362|gb|JAA09900.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263776|gb|JAA19854.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305934|gb|JAA31567.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305938|gb|JAA31569.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349361|gb|JAA41284.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349363|gb|JAA41285.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 515
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 418 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 477
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 478 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 515
>gi|134152680|ref|NP_006552.3| CUGBP Elav-like family member 2 isoform 2 [Homo sapiens]
gi|348575363|ref|XP_003473459.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Cavia
porcellus]
Length = 521
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|449480621|ref|XP_002190740.2| PREDICTED: CUGBP Elav-like family member 2 [Taeniopygia guttata]
Length = 490
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|327272094|ref|XP_003220821.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Anolis
carolinensis]
Length = 488
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|410963191|ref|XP_003988149.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Felis catus]
Length = 514
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|338721613|ref|XP_003364408.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Equus
caballus]
gi|345793484|ref|XP_857942.2| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Canis lupus
familiaris]
Length = 514
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|327272092|ref|XP_003220820.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Anolis
carolinensis]
Length = 536
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
>gi|134152696|ref|NP_058893.2| CUGBP Elav-like family member 2 isoform 1 [Rattus norvegicus]
gi|3451291|emb|CAA09103.1| ETR-R3b protein [Rattus norvegicus]
Length = 532
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
>gi|348575365|ref|XP_003473460.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Cavia
porcellus]
Length = 532
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
>gi|156717754|ref|NP_001096417.1| CUGBP Elav-like family member 2 [Xenopus (Silurana) tropicalis]
gi|152013392|sp|A4IIM2.1|CELF2_XENTR RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|134024252|gb|AAI36077.1| LOC100125022 protein [Xenopus (Silurana) tropicalis]
Length = 513
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 416 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 475
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 476 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 513
>gi|395539007|ref|XP_003771465.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Sarcophilus
harrisii]
Length = 526
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
>gi|159032031|ref|NP_001103698.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|237757271|ref|NP_001153765.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|285026421|ref|NP_001077055.2| CUGBP Elav-like family member 2 isoform 2 [Rattus norvegicus]
gi|148676041|gb|EDL07988.1| CUG triplet repeat, RNA binding protein 2 [Mus musculus]
gi|149021034|gb|EDL78641.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
gi|149021035|gb|EDL78642.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 526
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
>gi|326911121|ref|XP_003201910.1| PREDICTED: CUGBP Elav-like family member 2-like [Meleagris
gallopavo]
Length = 526
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
>gi|348575361|ref|XP_003473458.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Cavia
porcellus]
Length = 526
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
>gi|291401988|ref|XP_002717491.1| PREDICTED: CUG triplet repeat, RNA binding protein 2-like
[Oryctolagus cuniculus]
Length = 532
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
>gi|351699026|gb|EHB01945.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 483
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCC V +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ + +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEEYRILRGPDGLSRGCAFVTFTTRGMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 83/114 (72%), Gaps = 2/114 (1%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 371 PTLYNQNLLTQQSIG-AAGSQKEGPQGANLFIYHLPQEFGDQDLLQMFVPFGNVVSAKVF 429
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK-QNKPY 435
+DK T +SKCF FVSY++P SAQ AI +NG Q+G K+LKVQLKR +K NKPY
Sbjct: 430 IDKQTNLSKCFSFVSYDNPLSAQAAIQSVNGFQIGMKQLKVQLKRSSKNDNKPY 483
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + + TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIEEYRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++ ++S
Sbjct: 153 VTFTTRGMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM---ARQLQQQMQQIS 209
Query: 121 ALFSIYGTIKDLQILR 136
A S++G + L LR
Sbjct: 210 AA-SVWGNLAGLNTLR 224
>gi|354467972|ref|XP_003496441.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3
[Cricetulus griseus]
Length = 532
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEMANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
>gi|354467970|ref|XP_003496440.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Cricetulus griseus]
Length = 526
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEMANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
>gi|395539011|ref|XP_003771467.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Sarcophilus
harrisii]
Length = 536
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
>gi|148225362|ref|NP_001079593.1| CUGBP Elav-like family member 2 [Xenopus laevis]
gi|82241541|sp|Q7ZXE2.1|CELF2_XENLA RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|27924438|gb|AAH45035.1| Cugbp2-A-prov protein [Xenopus laevis]
Length = 536
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
>gi|327272098|ref|XP_003220823.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Anolis
carolinensis]
Length = 536
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P S
Sbjct: 445 LKGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVS 504
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 505 AQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
>gi|29436780|gb|AAH49453.1| Cugbp1 protein [Danio rerio]
Length = 534
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 140/237 (59%), Gaps = 8/237 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV +R+ A
Sbjct: 52 DSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 111
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLF+GM+ K +E ++ +FS YG
Sbjct: 112 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQ 171
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+ CAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 172 IEECRILRGPDGLSR-CAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 230
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
+R + Q NA S +L G +G P Y Q S S G L PM
Sbjct: 231 QKRIAQQLQQQMQQLNAASMWGNLTGLNSLG--PQYLAL-LQQSASSGNALNNLHPM 284
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 437 SAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 496
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 497 YDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 534
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
M + EK ++ E KLFVG + K E + MF + ++E I++ D +R C
Sbjct: 132 MKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIEECRILRGPDGLSR----C 187
Query: 59 CFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
FV +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 188 AFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRI 234
>gi|197100912|ref|NP_001126925.1| CUGBP Elav-like family member 2 isoform 2 [Pongo abelii]
gi|55733179|emb|CAH93273.1| hypothetical protein [Pongo abelii]
Length = 484
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVSFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
>gi|285002208|ref|NP_001165444.1| CUG triplet repeat, RNA binding protein 2-b [Xenopus laevis]
gi|1568645|gb|AAB09041.1| Etr-3 [Xenopus laevis]
Length = 538
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 72/91 (79%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
+GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 448 QGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSA 507
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 508 QAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 538
>gi|440904320|gb|ELR54847.1| CUGBP Elav-like family member 2, partial [Bos grunniens mutus]
Length = 519
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 20 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 80 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 139
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 140 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 199
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 422 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 481
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 482 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 519
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 100 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 158
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 159 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 198
>gi|395539013|ref|XP_003771468.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Sarcophilus
harrisii]
Length = 540
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|440800622|gb|ELR21658.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVGQVPK++ EA + + F + + +NI++D+ T+ S+GC FV +++ ADKA++A
Sbjct: 13 KLFVGQVPKNVQEATIRSFFSPYGEIVHMNILRDRFTQISKGCGFVSYSTKEAADKAISA 72
Query: 76 CHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
H+ T+P ++PLQV+YAD EL+++ EHKLFIG LP V+E + +F+ YG I+ L I
Sbjct: 73 LHSVVTIPPHTAPLQVRYADEELQQMAEHKLFIGKLPTTVTEELLRQIFAPYGNIEKLNI 132
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
L+G + C F+KY+ +E+A A+ A+NG K+ GS+ PLVVK+ADT
Sbjct: 133 LKGPADVN--CGFVKYDNREEAEKAIRALNG--KVVGSNEPLVVKYADT 177
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LF+ +P+ + + + F +G ++ + D+ T +SK GFVSY + +A AI+ +
Sbjct: 14 LFVGQVPKNVQEATIRSFFSPYGEIVHMNILRDRFTQISKGCGFVSYSTKEAADKAISAL 73
Query: 412 NGC 414
+
Sbjct: 74 HSV 76
>gi|410918520|ref|XP_003972733.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 501
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 131/206 (63%), Gaps = 4/206 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG 214
RR Q+ +Q N+ + SL G
Sbjct: 226 QRRLQQQLAQQMQQLNSATTWGSLTG 251
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 406 AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 465
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 466 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
>gi|45383614|ref|NP_989591.1| CUGBP Elav-like family member 2 [Gallus gallus]
gi|31747199|gb|AAP57761.1| ELAV-type RNA-binding protein 3 variant 4 [Gallus gallus]
Length = 488
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|221057576|ref|XP_002261296.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247301|emb|CAQ40701.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 512
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 127/206 (61%), Gaps = 12/206 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+M E Q+ +F+EF +V EV II+DK T + FV S EAD A+
Sbjct: 87 IKLFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIR 146
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPK++SE V +F
Sbjct: 147 SLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSISEESVKEMF 206
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 207 SPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 266
Query: 183 TEKERQARRAQKAQSQANNLPNADSQ 208
+ +QA+ QS N+ SQ
Sbjct: 267 PKSAKQAQIPMNMQSMQNSAHGISSQ 292
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GPPGANLFI+H+P E+ +L AF FG +LSA++ +K+TG ++ F FVSYE+ SA
Sbjct: 367 GPPGANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENIESAA 426
Query: 406 NAIAMMNGCQLGGKKLKVQL 425
AI+ MNG KKLKV +
Sbjct: 427 AAISQMNGFMALNKKLKVTV 446
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK ++E + MF + V+EV I+KD +T +GC FV +++
Sbjct: 180 ESGVDQAKLFIGSLPKSISEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 239
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+N+ + KKTL G + P++V++A+
Sbjct: 240 ALYAINSLNGKKTLEGCARPVEVRFAE 266
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LFI +P+ ++++ F+ FG V + DK T + K FV S + A N
Sbjct: 84 PVSIKLFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADN 143
Query: 407 AIAMMNGC-----QLGGKKLK 422
AI +N QLG ++K
Sbjct: 144 AIRSLNNQRTLDPQLGSLQVK 164
>gi|312068271|ref|XP_003137136.1| hypothetical protein LOAG_01549 [Loa loa]
gi|307767708|gb|EFO26942.1| hypothetical protein LOAG_01549 [Loa loa]
Length = 528
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ EA+ +F++F V ++N+++DK T+ASRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFVGMLNKKLTEDSVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+ S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE+ A+++
Sbjct: 139 TVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQTMEGCSKPIVVKFADTQKEKDAKKS 198
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 331 STSSSGGTGSG-GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 389
S S++G + +G GQ +GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK T +
Sbjct: 407 SVSNTGVSTAGSGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQTNL 466
Query: 390 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K NKPY
Sbjct: 467 SKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDNKPY 511
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTY 70
>gi|297300473|ref|XP_002805600.1| PREDICTED: CUGBP Elav-like family member 2-like [Macaca mulatta]
Length = 501
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 413 PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQA 472
Query: 407 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 473 AIQAMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|152013390|sp|Q7T2T1.2|CELF2_CHICK RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|31747201|gb|AAP57762.1| ELAV-type RNA-binding protein 3 variant L [Gallus gallus]
Length = 484
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
>gi|345485141|ref|XP_001605146.2| PREDICTED: CUGBP Elav-like family member 2 [Nasonia vitripennis]
Length = 733
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
+K + +K+FVGQVPK + E L +F+EF V ++N+++DK T +S+GCC + SR+
Sbjct: 194 EKPDPDNIKMFVGQVPKDLDENDLRTIFEEFGRVHQINVLRDKYTGSSKGCCAAMDYSRR 253
Query: 68 EA--DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
A K A + +T P+Q+K AD E R KLF+GML K +E +V +F +
Sbjct: 254 LALDTKRARAPESVRTFNQKLHPIQMKPADSE-NRSHRKLFVGMLSKKFTENDVRNMFDV 312
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YG I++ +LR + Q SKGCAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+K
Sbjct: 313 YGEIEECSVLRENGQ-SKGCAFVTFASKQSAVLAIKALHHSQTMEGCSSPLVVKFADTQK 371
Query: 186 ERQARRAQKAQSQANNL 202
++ +R Q+ Q+ N+
Sbjct: 372 DKDQKRLQQMQANLWNI 388
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
QIEGP G NLFIYH+P + D +L F FG VLSAKVF+DK T SKCFGFVSY+ P+
Sbjct: 642 QIEGPEGCNLFIYHLPHTYTDTDLIAMFMPFGNVLSAKVFIDKETKKSKCFGFVSYDKPS 701
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MM+G Q+G K+LKVQLK+ +K KPY
Sbjct: 702 SAQKAIQMMHGFQIGTKRLKVQLKK-SKDAKPY 733
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 306 GGMLGHRP--LNNSPGSVSPAVANSNPSTSSSGGT-GSGGQIEGPPGAN--LFIYHIPQE 360
G + H P N P SP+ S + T + +E P N +F+ +P++
Sbjct: 152 GKSISHHPHPYNKKPAQTSPSAPQSTTNGDQKENTIMNNNSVEKPDPDNIKMFVGQVPKD 211
Query: 361 FGDQELGNAFQAFGRVLSAKVFVDKATGVSK-CFGFVSY 398
+ +L F+ FGRV V DK TG SK C + Y
Sbjct: 212 LDENDLRTIFEEFGRVHQINVLRDKYTGSSKGCCAAMDY 250
>gi|393911007|gb|EJD76121.1| hypothetical protein, variant [Loa loa]
Length = 480
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ EA+ +F++F V ++N+++DK T+ASRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFVGMLNKKLTEDSVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+ S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE+ A+++
Sbjct: 139 TVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQTMEGCSKPIVVKFADTQKEKDAKKS 198
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 331 STSSSGGTGSG-GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 389
S S++G + +G GQ +GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK T +
Sbjct: 359 SVSNTGVSTAGSGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQTNL 418
Query: 390 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K NKPY
Sbjct: 419 SKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDNKPY 463
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTY 70
>gi|345310083|ref|XP_001515840.2| PREDICTED: CUGBP, Elav-like family member 2 [Ornithorhynchus
anatinus]
Length = 426
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
Query: 329 NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 388
NP +++S G+ GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T
Sbjct: 321 NPLSTTSSALGALTS-PGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTN 379
Query: 389 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 380 LSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 426
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|55730095|emb|CAH91772.1| hypothetical protein [Pongo abelii]
Length = 519
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTSSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 72/90 (80%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
Y++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKR 500
>gi|440792905|gb|ELR14112.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 458
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 112/188 (59%), Gaps = 20/188 (10%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+GQ+PK MTE + +F F + EV II+++ T SRGC FV + A+ A+
Sbjct: 104 VKLFIGQLPKSMTEPYIGPLFAPFGNLVEVAIIRNRATGESRGCAFVTYDNADSAELAIE 163
Query: 75 ACHNKKTLPGASSPLQVKYAD---GELER-----------------LEHKLFIGMLPKNV 114
HNK+TLPG +SP+QVKYA G+ R E KLFIGMLP+ V
Sbjct: 164 TLHNKQTLPGMTSPIQVKYAHGGGGDAPRYTPAPVPDYGMPGMDNMTEFKLFIGMLPRTV 223
Query: 115 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 174
E + A+F YG+I ++ +LR +S+GCAF+KY +E A+ A+ A NG+ +G +
Sbjct: 224 GEDGLRAIFQPYGSIIEVVVLREPDGSSRGCAFVKYHRREDAVNAINACNGQMFFQGQTN 283
Query: 175 PLVVKWAD 182
PL VK+AD
Sbjct: 284 PLTVKFAD 291
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+G Q +GPPGANLFIYH+P +GD +L F FG++LS KVF+DK T VSK FGFVS
Sbjct: 363 SGMSNQAQGPPGANLFIYHLPTHYGDGDLLTLFSPFGQILSVKVFLDKMTMVSKGFGFVS 422
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
Y S SA+ AI M+G Q+G K+LKVQLK+
Sbjct: 423 YASADSARLAIENMDGLQVGEKRLKVQLKK 452
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G +P+ + E L A+F+ + + EV ++++ +SRGC FV R++A A+NA
Sbjct: 213 KLFIGMLPRTVGEDGLRAIFQPYGSIIEVVVLREPDG-SSRGCAFVKYHRREDAVNAINA 271
Query: 76 CHNKKTLPGASSPLQVKYADG 96
C+ + G ++PL VK+ADG
Sbjct: 272 CNGQMFFQGQTNPLTVKFADG 292
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LFI +P+ + +G F FG ++ + ++ATG S+ FV+Y++ SA+ AI +
Sbjct: 106 LFIGQLPKSMTEPYIGPLFAPFGNLVEVAIIRNRATGESRGCAFVTYDNADSAELAIETL 165
Query: 412 NGCQ-LGGKKLKVQLK 426
+ Q L G +Q+K
Sbjct: 166 HNKQTLPGMTSPIQVK 181
>gi|326426729|gb|EGD72299.1| napor protein short isoform [Salpingoeca sp. ATCC 50818]
Length = 353
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
E+ +KLFVGQ+PK E QL A+ + + + ++ I+K+K T SRGC FV SRQ A
Sbjct: 19 DEDAIKLFVGQLPKSYGEEQLTALLQPYGAIHDMMILKNKMTGESRGCAFVTFCSRQSAL 78
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+ H K+TLP ++P+QVK AD E + KLF+GM+ K +EA++ A+F +G I+
Sbjct: 79 SAIADLHEKRTLPTMANPMQVKIADSEQRGDDRKLFVGMISKTCTEADLEAMFRPFGEIE 138
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ +L G + SKGCAF+KY A A+ ++ MEG P+VVK ADTE
Sbjct: 139 SVNVLIGPEGQSKGCAFVKYTNAGSANQAIAKLHNSTTMEGCRAPMVVKIADTE 192
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 81/132 (61%), Gaps = 18/132 (13%)
Query: 304 YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGD 363
YPG G +P +P GG Q EGPP +NLFIYH+PQE D
Sbjct: 240 YPGAGFGQQPYAQAP----------------YGGAARAPQKEGPPNSNLFIYHLPQELND 283
Query: 364 QELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV 423
L F +FG V+S+KVFVDK TG SKCFGFVSY++P SAQ AI MNG Q+GGK+LKV
Sbjct: 284 HSLAATFMSFGNVISSKVFVDKYTGQSKCFGFVSYDNPQSAQAAIQAMNGFQIGGKRLKV 343
Query: 424 QLKRDNKQNKPY 435
QLKR +N PY
Sbjct: 344 QLKR--PKNAPY 353
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LF+ +P+ +G+++L Q +G + + +K TG S+ FV++ S SA +AIA +
Sbjct: 25 LFVGQLPKSYGEEQLTALLQPYGAIHDMMILKNKMTGESRGCAFVTFCSRQSALSAIADL 84
Query: 412 N 412
+
Sbjct: 85 H 85
>gi|228480217|ref|NP_001153184.1| CUGBP Elav-like family member 2 isoform 1 [Pongo abelii]
gi|55733625|emb|CAH93489.1| hypothetical protein [Pongo abelii]
Length = 514
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++++++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQIDVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECWILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|402592937|gb|EJW86864.1| ELAV-type RNA binding protein variant B [Wuchereria bancrofti]
Length = 509
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ EA+ +F++F V ++N+++DK T+ SRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E +V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFVGMLNKKLTEDDVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+ S+GCAF+ + + A A++ ++ MEG S P+VVK+ADT+KE+ A++
Sbjct: 139 TVLKDSEGKSRGCAFVTFAHRSCAQQAIKQVHLSQTMEGCSKPIVVKFADTQKEKDAKKI 198
Query: 193 QKAQSQANNLPNADS 207
Q PN+ +
Sbjct: 199 CLLQLLQTAQPNSST 213
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 85/118 (72%), Gaps = 6/118 (5%)
Query: 323 PAVANSNPSTSSSG-----GTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 377
P +A +N T+SS T SGGQ +GP G NLFIYH+PQ+F D +L F FG ++
Sbjct: 376 PQLATNNLLTASSTPNTGMNTTSGGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSII 435
Query: 378 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAKVF+DK T +SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K +KPY
Sbjct: 436 SAKVFIDKQTNLSKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDSKPY 492
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTY 70
>gi|440906742|gb|ELR56971.1| CUGBP Elav-like family member 3, partial [Bos grunniens mutus]
Length = 476
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 13/199 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 6 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 65
Query: 73 VNACHNKKTLPGASSPLQVKYAD-----------GELERLEHKLFIGMLPKNVSEAEVSA 121
+A H +KTLPG + P+QVK AD G++ + KLF+GML K ++ +V
Sbjct: 66 QSALHEQKTLPGMNRPIQVKPADSESRGGRFCTFGKVGMKDRKLFVGMLGKQQTDEDVRK 125
Query: 122 LFSIYGTIKDLQILRGSQQ--TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
+F +GTI + L S S GCAF+K++T +A AA+ ++ + G+S LVVK
Sbjct: 126 MFEPFGTIDEWWALTPSSSLLNSSGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVK 185
Query: 180 WADTEKERQARRAQKAQSQ 198
+ADTEKER RR Q+ +Q
Sbjct: 186 FADTEKERGLRRMQQVATQ 204
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 386 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 445
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 446 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 476
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 2 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 61
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 62 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 92
>gi|341896837|gb|EGT52772.1| CBN-ETR-1 protein [Caenorhabditis brenneri]
Length = 585
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P++ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 46 DTIKMFVGQIPRNWNEVDCRRLFEQYGPVFSCNILRDKSTQASKGCCFVTFFHRKDAIEA 105
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +FS YG I+D
Sbjct: 106 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFSKYGQIEDC 164
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 165 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 222
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 81/108 (75%), Gaps = 4/108 (3%)
Query: 330 PSTSSSGGTG--SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 387
P+TSSS G+ G + GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T
Sbjct: 478 PATSSSVGSQMVGNGDVRGPDGANLFIYHLPQDFGDTDLINTFAPFGAILSAKVFIDKVT 537
Query: 388 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SKC+GFVS+E+P SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 538 NLSKCYGFVSFENPQSATNAISAMNGFQIGSKRLKVQLKVD--RGHPY 583
>gi|55729085|emb|CAH91279.1| hypothetical protein [Pongo abelii]
Length = 360
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S +VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSSIVVKFADTQKDKE 217
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SS + VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSSIVVKFADTQKDK 216
>gi|193204852|ref|NP_001122631.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
gi|351063347|emb|CCD71502.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
Length = 588
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 484 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 543
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 544 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD--RGNPY 586
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|193204850|ref|NP_001122630.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
gi|351063346|emb|CCD71501.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
Length = 586
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 482 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 541
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 542 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD--RGNPY 584
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|50261759|gb|AAT72460.1| FCA gamma protein [Lolium perenne]
Length = 668
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 114/176 (64%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ +E + + +E V EV +I+DK T + CCFV + + A +A+
Sbjct: 52 VKLFVGTVPRIASEDDVRHLSEEHGDVLEVALIRDKKTGEQQECCFVKYATSEGAKRAIR 111
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P++V+YAD E ERL EHKLF+ L K + E+ +FS +G ++D
Sbjct: 112 ALHNQYTIPGAMGPVEVRYADCEKERLGSIEHKLFVASLNKQATAKEIEEIFSPFGHVED 171
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+++ +KE AL+A+ +++G + M G PL+V++AD ++ R
Sbjct: 172 VYIMKDGTRQSRGCGFVEFSSKEPALSAVNSLSGTYIMRGCEQPLIVRFADPKRPR 227
>gi|196475703|gb|ACG76412.1| trinucleotide repeat containing 4 (predicted) [Otolemur garnettii]
Length = 564
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 119/187 (63%), Gaps = 3/187 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME-GSSVPLVVKWADTEKERQARR 191
+LRG TSKG LK+ + +++ +++ H+ E G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGLPLLKHMPLQPSIS--PSLSVCHQEERGASSSLVVKFADTEKERGLRR 182
Query: 192 AQKAQSQ 198
Q+ +Q
Sbjct: 183 MQQVATQ 189
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 67/87 (77%)
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI
Sbjct: 478 GCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAI 537
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR N+PY
Sbjct: 538 QAMNGFQIGMKRLKVQLKRPKDANRPY 564
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K T+ + MF+ F +DE +++ + P +
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGLPLLKHMPLQ 146
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+++ CH ++ GASS L VK+AD E ER
Sbjct: 147 PSISPSLSVCHQEER--GASSSLVVKFADTEKER 178
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|441625924|ref|XP_003257673.2| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Nomascus
leucogenys]
Length = 523
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 120/183 (65%), Gaps = 7/183 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKG---CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
I++ +ILRG S+G CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K
Sbjct: 170 IEECRILRGPDGLSRGNSSCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQK 229
Query: 186 ERQ 188
+++
Sbjct: 230 DKE 232
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 426 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 485
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 486 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 523
>gi|193204854|ref|NP_001122632.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
gi|151936119|gb|ABS18836.1| ELAV-type RNA binding protein variant E [Caenorhabditis elegans]
gi|351063348|emb|CCD71503.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
Length = 513
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 409 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 468
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 469 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD--RGNPY 511
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|17532857|ref|NP_493673.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
gi|1289522|gb|AAA98566.1| elav-type ribonucleoprotein [Caenorhabditis elegans]
gi|151936111|gb|ABS18832.1| ELAV-type RNA binding protein variant A [Caenorhabditis elegans]
gi|351063336|emb|CCD71491.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
Length = 584
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 480 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 539
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 540 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD--RGNPY 582
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|268533976|ref|XP_002632118.1| C. briggsae CBR-ETR-1 protein [Caenorhabditis briggsae]
Length = 574
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+ S+GCCFV R++A +A
Sbjct: 50 DAIKMFVGQIPRQWNEVDCRRLFEQYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEA 109
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 110 QGALHNIKVIDGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGLIEDC 168
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR + S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 169 SVLRDNDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 226
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+T+SSG G + GP GANLFIYH+PQ+FGD +L N F FG++LSAKVF+DK T +S
Sbjct: 470 ATTSSGQLVGNGDVRGPDGANLFIYHLPQDFGDTDLINTFAPFGQILSAKVFIDKVTNLS 529
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KC+GFVSYE+P SA NAIA MNG Q+G K+LKVQLK D + PY
Sbjct: 530 KCYGFVSYETPQSANNAIAAMNGFQIGSKRLKVQLKVD--RGNPY 572
>gi|328873245|gb|EGG21612.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 370
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 115/180 (63%), Gaps = 4/180 (2%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K+FVG +P M E +L +F +F + ++IIKDK T RGC F+ +++EAD A+N
Sbjct: 15 KVFVGHIPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPRGCAFISYGTKEEADNAINT 74
Query: 76 CHNKKTLPG-ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
+ G + PLQVKY+D E+E++E KLF+GML + +E ++ LFS YG I+D+ I
Sbjct: 75 MNATNQYIGDMNKPLQVKYSDNEIEKMERKLFVGMLGTS-NEDQIKQLFSKYGNIEDINI 133
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+R KG F+K+ +E+A A+ ++ K + GS++P++VK+ADT ERQ R+ Q+
Sbjct: 134 VREPDGKPKGYGFVKFSMREEAEEAIRDMDSKQTLPGSTLPIIVKFADT--ERQKRKKQQ 191
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 57/78 (73%)
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
+LFIY++P +GD EL N FQ +G V+SAKVF+DK TG SKCFGFVSY+ SA AI
Sbjct: 291 DLFIYYLPASYGDAELKNLFQQYGNVVSAKVFIDKNTGQSKCFGFVSYDRSQSAIQAINN 350
Query: 411 MNGCQLGGKKLKVQLKRD 428
+NG + GKKLKV KRD
Sbjct: 351 LNGFHVEGKKLKVNFKRD 368
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P G +F+ HIP + EL F FG +L+ + DK T V + F+SY + A N
Sbjct: 11 PQGFKVFVGHIPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPRGCAFISYGTKEEADN 70
Query: 407 AIAMMNGC 414
AI MN
Sbjct: 71 AINTMNAT 78
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC-AFLKYETKEQALAALE 161
+ LFI LP + +AE+ LF YG + ++ C F+ Y+ + A+ A+
Sbjct: 290 NDLFIYYLPASYGDAELKNLFQQYGNVVSAKVFIDKNTGQSKCFGFVSYDRSQSAIQAIN 349
Query: 162 AINGKHKMEGSSVPLVVK 179
+NG H +EG + + K
Sbjct: 350 NLNGFH-VEGKKLKVNFK 366
>gi|389584459|dbj|GAB67191.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 567
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 119/188 (63%), Gaps = 12/188 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK M E Q+ +F+EF +V EV II+DK T + FV S EAD A+
Sbjct: 88 IKLFIGRVPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIR 147
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPK+++E V +F
Sbjct: 148 SLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSITEESVKEMF 207
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 208 SPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 267
Query: 183 TEKERQAR 190
+ +Q +
Sbjct: 268 PKSAKQTQ 275
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%)
Query: 313 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQA 372
PL NSP + + ++N S GPPGANLFI+H+P E+ +L AF
Sbjct: 389 PLGNSPVRMFISFVHANLGIRYFFFPSSRSSFAGPPGANLFIFHVPNEWHQTDLIQAFSP 448
Query: 373 FGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 425
FG +LSA++ +K+TG ++ F FVSYES SA AI+ MNG KKLKV +
Sbjct: 449 FGELLSARIATEKSTGRNRGFAFVSYESIESAAAAISQMNGFMALNKKLKVTV 501
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK +TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 181 ESGVDQAKLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 240
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+N+ + KKTL G + P++V++A+
Sbjct: 241 ALYAINSLNGKKTLEGCARPVEVRFAE 267
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LFI +P+ ++++ F+ FG V + DK T + K FV S + A N
Sbjct: 85 PVSIKLFIGRVPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADN 144
Query: 407 AIAMMNGC-----QLGGKKLK 422
AI +N QLG ++K
Sbjct: 145 AIRSLNNQRTLDPQLGSLQVK 165
>gi|146386739|pdb|2DHS|A Chain A, Solution Structure Of Nucleic Acid Binding Protein
Cugbp1ab And Its Binding Study With Dna And Rna
Length = 187
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A
Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I+
Sbjct: 76 QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+AD
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 187
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
V +R A A+ A H +T+ G SSP+ VK+AD
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 187
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEK 101
>gi|310689909|pdb|3NNC|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
Length = 175
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A
Sbjct: 4 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 63
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I+
Sbjct: 64 QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIE 123
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+AD
Sbjct: 124 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 175
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 82 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 140
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
V +R A A+ A H +T+ G SSP+ VK+AD
Sbjct: 141 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 175
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 5 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 64
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 65 NALHNMKVLPGMHHPIQMKPADSEK 89
>gi|151936115|gb|ABS18834.1| ELAV-type RNA binding protein variant C [Caenorhabditis elegans]
Length = 378
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 327 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 386
++ PST++ +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 387 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 433
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|32482055|gb|AAP84374.1| FCA-A1 [Triticum aestivum]
Length = 602
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 34 MFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93
+F++ V EV +I+D+ T +GCCFV + +EA++A+ A HN+ T+PGA P+QV+Y
Sbjct: 4 LFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRALHNQCTIPGAMGPVQVRY 63
Query: 94 ADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKY 150
ADGE ER +EHKLF+ L K + E+ +F+ +G ++D+ I++ + S+GC F+K+
Sbjct: 64 ADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVEDVYIMKDGMRQSRGCGFVKF 123
Query: 151 ETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 124 SSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 160
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ +KE+ S E KLFV + K T ++ +F F V++V I+KD R SRGC FV
Sbjct: 64 ADGEKERHGSIEH-KLFVASLNKQATAKEIEEIFAPFGHVEDVYIMKDG-MRQSRGCGFV 121
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S++ A A+N+ + G PL V++AD + R
Sbjct: 122 KFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 160
>gi|32482057|gb|AAP84375.1| mutant FCA-D1 [Triticum aestivum]
Length = 284
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 107/160 (66%), Gaps = 3/160 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 125 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 184
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 185 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEVFAPFGHVED 244
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G
Sbjct: 245 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRG 284
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQALAA 159
KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+KY T E+A A
Sbjct: 126 KLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFVKYATSEEAERA 182
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQ 188
+ A++ + + G+ P+ V++AD EKER
Sbjct: 183 IRALHNQCTIPGAMGPVQVRYADGEKERH 211
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 127 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 186
Query: 411 MNGCQLGGKKLKVQLK 426
N C + G VQ++
Sbjct: 187 HNQCTIPGAMGPVQVR 202
>gi|402590229|gb|EJW84160.1| trinucleotide repeat containing 4 [Wuchereria bancrofti]
Length = 315
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 154/328 (46%), Gaps = 65/328 (19%)
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGA--- 215
A+ A++G M G+S LVVK+ADTEKERQ RR Q+ +Q L ++
Sbjct: 2 AINALHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAAQMGLLNPVLVNQAGVYNTAYQ 61
Query: 216 -------------------LPMGYAPPYNGYGYQASGSYG-------LMQYRLPPMQNQP 249
P+ AP A+G G L Q+ L P+ P
Sbjct: 62 QLLQQQATLVAAQTAAAAYFPVAMAP---QTALTAAGLAGTTNPATFLTQHPLQPLSALP 118
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-------AVPGLQYPM 302
+ Q N+++ S LS P +YA + V P AV Y +
Sbjct: 119 --------LQQANSVQAIS-ALSQPYAPVDYAAAAAASVTQYAPSSTAAAVAVDSTAYTL 169
Query: 303 PYPGGM-LGHRPLNNSPGSVSPAV---ANSNPSTSSSGGT-----------GSGGQIEGP 347
P G + G P P + +P V +NP + G+ ++ GP
Sbjct: 170 PASGTLPAGTIPTVTLPSAYNPLVNLEQQANPYNQALQQAIALQQAAILFPGAQKEVLGP 229
Query: 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 407
G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVSY++ ASA A
Sbjct: 230 EGCNLFIYHLPQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFVSYDNTASAMAA 289
Query: 408 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
I MNG Q+G K+LKVQLKR ++KPY
Sbjct: 290 IQAMNGFQIGMKRLKVQLKR--PRDKPY 315
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
A+NA H +T+PGASS L VK+AD E ER
Sbjct: 2 AINALHGSQTMPGASSSLVVKFADTEKER 30
>gi|344306569|ref|XP_003421958.1| PREDICTED: CUGBP Elav-like family member 5-like [Loxodonta
africana]
Length = 440
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 178/388 (45%), Gaps = 77/388 (19%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEA 117
C F+ +R A KA A H +KTLPG + P+QVK AD E G L S A
Sbjct: 120 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG------GGPLGTGSSGA 173
Query: 118 EVSALFSIYG-TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS-SVP 175
+ L + I++ Q GCAF+K+ + +A AA+ H + GS ++P
Sbjct: 174 QWYTLTTTPPPNIRETQHPHPYPSLGAGCAFVKFSSHTEAQAAI------HALHGSQTMP 227
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSY 235
+ +R Q Q L + S L G A ++ Q G+
Sbjct: 228 V------------SRATMLMQQQTTVLSTSGSY-------LSPGVA--FSPCHIQQIGAV 266
Query: 236 GLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV 295
L P+ G H PP+ A+ G +++ GF G
Sbjct: 267 SLNGLPATPIAPASGLHS--PPLLGTTAVPGLVTPITN------------GFAGV----- 307
Query: 296 PGLQYPMPYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSGGTGSGGQIEGP 347
+P+PGG H L + G V SP VA + +P+ S Q GP
Sbjct: 308 ------VPFPGG---HPALETVYANGLVPYPAQSPTVAETLHPAFSGVQ------QYTGP 352
Query: 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 407
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ A
Sbjct: 353 EGCNLFIYHLPQEFGDTELTQMFLPFGNVISSKVFMDRATNQSKCFGFVSFDNPASAQTA 412
Query: 408 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
I MNG Q+G K+LKVQLKR PY
Sbjct: 413 IQAMNGFQVGMKRLKVQLKRPKDPGHPY 440
>gi|73961237|ref|XP_852916.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Canis lupus
familiaris]
Length = 488
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 111/197 (56%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F SR +
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCRFSTYCSRPSNLR 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
H + +LPG + P+QVK AD E + KLF+GML SE +V
Sbjct: 111 DRGTRHGEGSLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNTQQSEDDVRR 170
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
L I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 171 LVKALRNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 230
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 231 DTDKERTMRRMQQMAGQ 247
>gi|297279975|ref|XP_002801847.1| PREDICTED: CUGBP Elav-like family member 3-like, partial [Macaca
mulatta]
Length = 438
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 102/158 (64%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ E+ +IKDK T +GC F+ +R A KA +A H +KTLPG + P+QVK AD E
Sbjct: 1 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 60
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
+ KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+
Sbjct: 61 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAI 120
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 121 NTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 158
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 348 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 407
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 408 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 438
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 55 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 111
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 112 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 147
>gi|321461546|gb|EFX72577.1| hypothetical protein DAPPUDRAFT_326142 [Daphnia pulex]
Length = 229
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 110/177 (62%), Gaps = 2/177 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E +KLFVGQ+P+++ EA L MF+EF + E+ ++KDK T +GC F+ +R+ A A
Sbjct: 34 EAIKLFVGQIPRNLEEADLRPMFEEFGKIYELTVLKDKLTGMHKGCAFLTYCTRESAINA 93
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H K+TLPG + P+QVK AD + + KLF+GML K ++ +V LF YGTI++
Sbjct: 94 QNALHEKRTLPGMNRPIQVKPADSDNRGEDRKLFVGMLSKQQTDEDVRQLFLPYGTIEEC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM--EGSSVPLVVKWADTEKER 187
ILRG SKGCAF+K+ T +A A+ +++G M SS L + D K++
Sbjct: 154 TILRGPDGQSKGCAFVKFSTHAEAQTAINSLHGSQTMPVSISSTHLDISNVDQNKKQ 210
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+N+ EA++ +F +G I +L +L+ KGCAFL Y T+E A+ A A
Sbjct: 37 KLFVGQIPRNLEEADLRPMFEEFGKIYELTVLKDKLTGMHKGCAFLTYCTRESAINAQNA 96
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ K + G + P+ VK AD++ + R+
Sbjct: 97 LHEKRTLPGMNRPIQVKPADSDNRGEDRK 125
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 332 TSSSGGTGSGGQ----------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 381
TS++G G GG+ ++ LF+ IP+ + +L F+ FG++ V
Sbjct: 8 TSTAGLDGGGGRRVHCECEVIPLKNAEAIKLFVGQIPRNLEEADLRPMFEEFGKIYELTV 67
Query: 382 FVDKATGVSKCFGFVSY---ESPASAQNAI 408
DK TG+ K F++Y ES +AQNA+
Sbjct: 68 LKDKLTGMHKGCAFLTYCTRESAINAQNAL 97
>gi|330801309|ref|XP_003288671.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
gi|325081293|gb|EGC34814.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
Length = 348
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 182/421 (43%), Gaps = 103/421 (24%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FVG +P M E + +F +F + ++ IIKDK T S+GC F+ +++EAD A+N
Sbjct: 19 VFVGHIPSSMNEEGVSNIFGKFGNIIDITIIKDKRTNVSKGCAFITFSTKEEADMAINTV 78
Query: 77 HNKKT-LPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
+ T L + PLQVKY+D E+E++E KLFIGML E +V +F +G I
Sbjct: 79 NESNTFLENMNKPLQVKYSDNEIEKMERKLFIGML-GTADEDQVRQIFGNFGII------ 131
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA--Q 193
+ L + +GK K G +K++ ++ A R Q
Sbjct: 132 -------------------EELTVVREKDGKPKGYG-----FIKFSTRDESENALRELDQ 167
Query: 194 KAQSQANNLP------NADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQN 247
K +NLP + + Q P P ++ Y Q PP
Sbjct: 168 KHTVPGSNLPLIVKFADTERQKRKKLLGQPTPQQPSFSFYQQQ------------PPQTG 215
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
P F+G Q M A G RNY P F G
Sbjct: 216 YPFFYG------QNQQMAQAMN------GYRNYQQPNMNF-------------------G 244
Query: 308 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
M+ + + S PS S+ +LFIY++P +GD+EL
Sbjct: 245 MMQNPAFDYS----QQQNQQQQPSESN----------------DLFIYYLPFTYGDEELK 284
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
F +G V+S+KVF+DK T SKCFGFVSY++ SA AI +NG + GKKLKV KR
Sbjct: 285 QLFSPYGNVVSSKVFIDKNTQQSKCFGFVSYDNTQSAIQAIQELNGRAIEGKKLKVNFKR 344
Query: 428 D 428
+
Sbjct: 345 E 345
>gi|395815677|ref|XP_003781351.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 510
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 399 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 457
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 458 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 510
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|242022170|ref|XP_002431514.1| hypothetical protein Phum_PHUM533900 [Pediculus humanus corporis]
gi|212516808|gb|EEB18776.1| hypothetical protein Phum_PHUM533900 [Pediculus humanus corporis]
Length = 599
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 79/101 (78%)
Query: 335 SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
S +G+G QIEGP GANLFIYH+PQEF D +L F +FG V+SAKVF+DK T +SKCFG
Sbjct: 499 SITSGAGKQIEGPDGANLFIYHLPQEFSDADLATTFHSFGNVISAKVFIDKMTNLSKCFG 558
Query: 395 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
FVSY++ SAQ+AI MNG Q+G K+LKVQLKR + ++PY
Sbjct: 559 FVSYDNVLSAQSAIQAMNGFQIGTKRLKVQLKRSKEASRPY 599
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E++V LFS YG I++ +LR + T + CAF+ Y +K+ A+ A++A++
Sbjct: 1 MLAKKCTESDVRNLFSPYGNIEECTVLRDT--TGQSCAFVTYASKQSAINAIKAMHHSQT 58
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
M+G S LVVK+ADT+KE+ +R Q+ Q+ NL
Sbjct: 59 MDGCSSALVVKFADTQKEKDQKRLQQMQANLWNL 92
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE+ + +F + ++E +++D T + C FV S+Q A A+ A H+ +T
Sbjct: 2 LAKKCTESDVRNLFSPYGNIEECTVLRDTT---GQSCAFVTYASKQSAINAIKAMHHSQT 58
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SS L VK+AD + E+ + +L
Sbjct: 59 MDGCSSALVVKFADTQKEKDQKRL 82
>gi|403255513|ref|XP_003920470.1| PREDICTED: CUGBP Elav-like family member 1 [Saimiri boliviensis
boliviensis]
Length = 597
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 486 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 544
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 545 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 597
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 104/161 (64%), Gaps = 3/161 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 180 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 239
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 240 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 299
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
++ +ILRG S+GCAF+ + T+ A A++A++ ME
Sbjct: 300 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTME 340
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 183 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 242
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARR 191
A++ + G P+ +K AD+EK R
Sbjct: 243 NALHNMKVLPGMHHPIQMKPADSEKNNVEDR 273
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 260 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 317
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL 101
V +R A A+ A H +T+ LQ + G L L
Sbjct: 318 VTFTTRAMAQTAIKAMHQAQTMELYLQLLQQTASSGNLNTL 358
>gi|343961815|dbj|BAK62495.1| CUG triplet repeat RNA-binding protein 1 [Pan troglodytes]
Length = 483
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 372 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 430
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|38570081|ref|NP_941989.1| CUGBP Elav-like family member 1 isoform 2 [Homo sapiens]
gi|332259916|ref|XP_003279030.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|402893568|ref|XP_003909964.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Papio anubis]
gi|8745537|gb|AAF78956.1|AF267534_1 CUG-binding protein A isoform [Homo sapiens]
gi|21411010|gb|AAH31079.1| CUG triplet repeat, RNA binding protein 1 [Homo sapiens]
gi|119588317|gb|EAW67911.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_f [Homo
sapiens]
gi|123994083|gb|ABM84643.1| CUG triplet repeat, RNA binding protein 1 [synthetic construct]
Length = 483
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 372 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 430
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|291384970|ref|XP_002709144.1| PREDICTED: CUG triplet repeat, RNA-binding protein 1-like
[Oryctolagus cuniculus]
Length = 483
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 372 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 430
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|401397143|ref|XP_003879991.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
gi|325114399|emb|CBZ49956.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
Length = 475
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 13/187 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+ M +A L +F+EF V E II+DK T + FV S AD A+
Sbjct: 37 IKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAAIR 96
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ + L + P+ VKYA GE E+L + KLFIG +P+ ++E EV
Sbjct: 97 GLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPGQDQAKLFIGSIPRMMTEDEVRQF 156
Query: 123 FSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH EG S P+ V++A
Sbjct: 157 FSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHTFEGCSRPVEVRFA 216
Query: 182 DTEKERQ 188
+++ RQ
Sbjct: 217 ESKAARQ 223
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGPPGAN+F++H+P E+ +L F FG V+SA+V D+ TG ++ F FVSY++ SA
Sbjct: 340 EGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDNVESA 399
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
A+ MNG GGK+LKV +K+ +Q
Sbjct: 400 ATAVNNMNGFMAGGKRLKVSVKKGEEQ 426
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+++ KLF+G +P+ MTE ++ F + V+EV ++KD +GCCFV ++EA
Sbjct: 134 QDQAKLFIGSIPRMMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
AV K T G S P++V++A+ + R + L
Sbjct: 194 AVRTLSGKHTFEGCSRPVEVRFAESKAARQQQLL 227
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
+E KLF+G +P+++ +A + +F +G +K+ I+R + K AF+K + A AA
Sbjct: 35 VEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAA 94
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKER 187
+ +N +E S P+ VK+A E E+
Sbjct: 95 IRGLNSTRILEQSMGPITVKYATGEAEK 122
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LF+ +PQ D L F+ FG V A + DKATG K FV S A+A AI +
Sbjct: 39 LFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAAIRGL 98
Query: 412 NGCQL 416
N ++
Sbjct: 99 NSTRI 103
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV VP T L+ F F V + D+TT +RG FV S + A A
Sbjct: 347 IFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFV---SYDNVESAATAV 403
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
+N L+V GE + ++H L
Sbjct: 404 NNMNGFMAGGKRLKVSVKKGEEQYVQHLL 432
>gi|410045110|ref|XP_003313076.2| PREDICTED: CUGBP Elav-like family member 1 [Pan troglodytes]
Length = 461
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 350 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 408
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 409 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 461
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 4/136 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKG 144
I++ +ILRG S+G
Sbjct: 161 IEECRILRGPDGLSRG 176
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEK 128
>gi|350580113|ref|XP_003122868.3| PREDICTED: CUGBP, Elav-like family member 1, partial [Sus scrofa]
Length = 337
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 226 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 284
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 285 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 337
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 1 CAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 47
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
C FV +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 1 CAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 48
>gi|426368243|ref|XP_004051120.1| PREDICTED: CUGBP Elav-like family member 1 [Gorilla gorilla
gorilla]
Length = 551
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 440 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 498
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 551
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 45/181 (24%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 124 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 183
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A NA HN K LPG P+Q+K AD E KN
Sbjct: 184 EAQNALHNMKVLPGMHHPIQMKPADSE--------------KN----------------- 212
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +
Sbjct: 213 ------------NGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 260
Query: 191 R 191
R
Sbjct: 261 R 261
>gi|224068610|ref|XP_002302783.1| predicted protein [Populus trichocarpa]
gi|222844509|gb|EEE82056.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 110/180 (61%), Gaps = 10/180 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL++ +P+ TE + ++F+E V EV + +DK T + CFV + +EAD+A+ A
Sbjct: 81 KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRA 140
Query: 76 CHNKKTLPGASSPLQVKYADGELER----------LEHKLFIGMLPKNVSEAEVSALFSI 125
HN+ T+PG +P +V+YADGE ER KL++G + K S+ E+ +FS
Sbjct: 141 LHNQHTIPGEVAPFKVRYADGERERPVARCSMVGGFVDKLYVGSINKLASKQEIEEIFSP 200
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YG ++D+ I R + S+GCAF+K+ ++ ALAA++ +NG M G PL+V++AD +K
Sbjct: 201 YGHVEDVYIARDELKQSRGCAFVKFAHRDMALAAIKGLNGTLTMRGCDQPLIVRFADPKK 260
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYE 151
Y DG + KL+I +P+ +E + +LF +G++ ++ + R + + F+KY
Sbjct: 73 YGDGGVNA---KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYA 129
Query: 152 TKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
T E+A A+ A++ +H + G P V++AD E+ER R
Sbjct: 130 TFEEADRAIRALHNQHTIPGEVAPFKVRYADGERERPVARC 170
>gi|12642586|gb|AAK00297.1|AF314172_1 BRUNOL2 [Mus musculus]
Length = 436
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 325 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 383
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 384 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
Query: 55 SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPK 112
S+GCCFV +R+ A +A NA HN K LPG P+Q+K AD E + KLFIGM+ K
Sbjct: 7 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISK 66
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
+E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG
Sbjct: 67 KCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGC 126
Query: 173 SVPLVVKWADTEKERQARR 191
S P+VVK+ADT+K+++ +R
Sbjct: 127 SSPMVVKFADTQKDKEQKR 145
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 43 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAF 101
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 102 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 146
>gi|237832459|ref|XP_002365527.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|211963191|gb|EEA98386.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|221487976|gb|EEE26190.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii GT1]
gi|221508501|gb|EEE34070.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 648
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 16/194 (8%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP + E L +F+ F V EV +I+DK+T R FV S AD +
Sbjct: 102 IKLFVGRVPHTVDEEALRPIFESFGEVREVFVIRDKSTLKHRNSAFVKMASLAAADACIR 161
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAEV 119
A H+ + L A P+ VKYA GE ERL + KLF+G +P+ +SE E+
Sbjct: 162 ALHSNRVLDAALGPIIVKYATGEAERLGMHSLGMGGEGGGVDQAKLFVGSIPRTMSEDEL 221
Query: 120 SALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
F YGT++++ +++ S T KGCAF+K++ KE+ L A+ +NGKH + + P+ V
Sbjct: 222 RLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHVFDECTRPVEV 281
Query: 179 KWADTEKERQARRA 192
++A+++ +RQ + A
Sbjct: 282 RFAESKSQRQQQMA 295
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 58/90 (64%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
+ GPPGAN+F++HIP E+ +L F FG ++S + VDKA+ ++ F FVSY++
Sbjct: 401 ETAGPPGANVFVFHIPNEWTKADLVQTFSGFGNIVSCHIAVDKASHRNRGFAFVSYDNIQ 460
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 432
SA NA+ MNGC + K+L V +K+ + +
Sbjct: 461 SAANAVNHMNGCLVANKRLNVSIKKGEEHH 490
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++ KLFVG +P+ M+E +L F+ + V+EV ++KD T +GC FV ++E A
Sbjct: 203 DQAKLFVGSIPRTMSEDELRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHA 262
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER 100
+ + K + P++V++A+ + +R
Sbjct: 263 MRNLNGKHVFDECTRPVEVRFAESKSQR 290
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV +P T+A L+ F F + +I DK + +RG FV + Q A AVN
Sbjct: 410 VFVFHIPNEWTKADLVQTFSGFGNIVSCHIAVDKASHRNRGFAFVSYDNIQSAANAVN-- 467
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKLFI 107
H L A+ L V GE ++H L +
Sbjct: 468 HMNGCLV-ANKRLNVSIKKGEEHHVQHLLNV 497
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 409
A LF+ IP+ + EL FQ +G V V D ATG K FV ++ +A+
Sbjct: 205 AKLFVGSIPRTMSEDELRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMR 264
Query: 410 MMNG 413
+NG
Sbjct: 265 NLNG 268
>gi|449269404|gb|EMC80177.1| CUG-BP- and ETR-3-like factor 3, partial [Columba livia]
Length = 449
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 3/188 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E+ L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 9 DHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSAL 68
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 69 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIE 128
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKG + ++G M G+S LVVK+ADT+KER R
Sbjct: 129 ECTILRGPDGASKGGF---WGAGGAPHGCRHPLHGSQTMPGASSSLVVKFADTDKERTLR 185
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 186 RMHQMAGQ 193
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 359 EGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 418
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 419 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 449
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 347 PPGA---------NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
PPGA LF+ IP+ + +L F+ FGR+ V D+ TG+ K F++
Sbjct: 1 PPGAIAMKDHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLT 60
Query: 398 YESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
Y + SA A A+ L G +Q+K + + +
Sbjct: 61 YCARDSALKAQSALHEQKTLPGMNRPIQVKPADSEGR 97
>gi|449502234|ref|XP_002199924.2| PREDICTED: CUGBP Elav-like family member 1 [Taeniopygia guttata]
Length = 485
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 374 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 432
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 433 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|270016806|gb|EFA13252.1| hypothetical protein TcasGA2_TC001522 [Tribolium castaneum]
Length = 307
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 150/324 (46%), Gaps = 83/324 (25%)
Query: 170 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 229
+G+S LVVK+ADTEKERQ R + Q A N+ + + FGA Y Y
Sbjct: 9 KGASSSLVVKFADTEKERQLR---RMQQMAGNMSLLNPFVFNQFGA--------YGAYAQ 57
Query: 230 QA---------------SGSY----GLMQYRLPPMQNQPGFHGIIPPVNQ-------GNA 263
+ G+Y + ++P + ++PP + G
Sbjct: 58 HSLDFQQQAALMAAATAQGTYINPMAALATQIPHATLNGMANSVVPPTSDVGVGAGSGQP 117
Query: 264 MRGASPDLSS------NMG-------------------PRNYAMP---PSGFVGSGYPAV 295
+ GA P L S NM P+ Y P P+G + A
Sbjct: 118 VNGAIPSLPSPTMPTFNMAAQTPNGQPGGTEAVYTNGIPQTYPAPQGLPNGEAALQHAAY 177
Query: 296 PGLQYPMPYPG----GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGAN 351
PG+Q PYPG + G P A P ++ + G I GP G N
Sbjct: 178 PGMQ---PYPGVAYPAVYGQFPQ-----------AIPQPMSAVAPAQREGCSISGPEGCN 223
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI M
Sbjct: 224 LFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAM 283
Query: 412 NGCQLGGKKLKVQLKRDNKQNKPY 435
NG Q+G K+LKVQLKR N+PY
Sbjct: 284 NGFQIGMKRLKVQLKRPKDANRPY 307
>gi|60302694|ref|NP_001012539.1| CUGBP Elav-like family member 1 [Gallus gallus]
gi|60098733|emb|CAH65197.1| hypothetical protein RCJMB04_7f23 [Gallus gallus]
Length = 485
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 374 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 432
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 433 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|387015318|gb|AFJ49778.1| CUGBP Elav-like family member 1-like [Crotalus adamanteus]
Length = 511
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 400 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 458
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 511
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 224
>gi|317419091|emb|CBN81129.1| CUG-BP-and ETR-3-like factor 4 [Dicentrarchus labrax]
Length = 527
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 5/187 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T + V R +
Sbjct: 48 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKVNLVVTKIFRSKT-- 105
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
+ H +T+ + P+QVK AD E + KLF+GML K SE +V LF +G+I++
Sbjct: 106 YLLPMHTLRTM---NRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRR 222
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 223 MQQMAGQ 229
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++P SA
Sbjct: 437 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 496
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 497 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 527
>gi|62857945|ref|NP_001017152.1| CUGBP Elav-like family member 1 [Xenopus (Silurana) tropicalis]
gi|123910258|sp|Q28HE9.1|CELF1_XENTR RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|89272922|emb|CAJ82289.1| CUG triplet repeat, RNA binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 490
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 329 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 387
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T
Sbjct: 383 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQT 442
Query: 388 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 443 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLFVG V K E + AMF +F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFVGMVSKKCNENDIRAMFSQFGQIEESRILRGPDGM-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 197
>gi|70939105|ref|XP_740139.1| RNA binding protein [Plasmodium chabaudi chabaudi]
gi|56517645|emb|CAH76403.1| RNA binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 248
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 106/164 (64%), Gaps = 12/164 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+ E QL +F+EF +V+EV II+DK T + FV S EAD A+
Sbjct: 85 IKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIR 144
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPKN++E + +F
Sbjct: 145 SLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMF 204
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGK 166
S+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK
Sbjct: 205 SVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGK 248
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++A A
Sbjct: 182 DQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYA 241
Query: 73 VNACHNK 79
+++ + K
Sbjct: 242 ISSLNGK 248
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
KLFIG +PKN E ++ +F +G + ++ I+R K AF+K + +A A+ +
Sbjct: 86 KLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIRS 145
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
+N + ++ L VK+A E
Sbjct: 146 LNNQRTLDQQLGSLQVKYASGE 167
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LFI +P+ + +++L F+ FG V + DK T + K FV S + A N
Sbjct: 82 PVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADN 141
Query: 407 AIAMMNG-----CQLGGKKLK 422
AI +N QLG ++K
Sbjct: 142 AIRSLNNQRTLDQQLGSLQVK 162
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
G A LFI +P+ ++ + + F +G V + D +TG+ K FV + A
Sbjct: 180 GVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQAL 239
Query: 406 NAIAMMNG 413
AI+ +NG
Sbjct: 240 YAISSLNG 247
>gi|308456493|ref|XP_003090683.1| CRE-ETR-1 protein [Caenorhabditis remanei]
gi|308261154|gb|EFP05107.1| CRE-ETR-1 protein [Caenorhabditis remanei]
Length = 612
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Query: 19 VGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHN 78
+ Q+P+ E +F+ + V NI++DK+T+ S+GCCFV R++A +A A HN
Sbjct: 22 IFQIPRQWNEVDCRRLFEAYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGALHN 81
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS 138
K + G P+Q+K AD E R E KLFIG L K SE + +FS +G I+D +LR +
Sbjct: 82 IKVIDGMHHPVQMKPADTE-NRNERKLFIGQLSKKHSEENLREIFSKFGQIEDCSVLRDN 140
Query: 139 QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 141 DGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 192
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 83/116 (71%), Gaps = 2/116 (1%)
Query: 320 SVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 379
S + V ++ STS +G G + GP GANLFIYH+PQ+FGD +L N F FG +LSA
Sbjct: 497 SAAVGVPSAVTSTSGAGQLIGNGDVRGPDGANLFIYHLPQDFGDTDLINTFAPFGVILSA 556
Query: 380 KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KVF+DK T +SKC+GFVS+E+P SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 557 KVFIDKVTNLSKCYGFVSFENPQSATNAISAMNGFQIGSKRLKVQLKVD--RGHPY 610
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLF+GQ+ K +E L +F +F +++ ++++D + SRGC FV +R
Sbjct: 98 DTENRNER-KLFIGQLSKKHSEENLREIFSKFGQIEDCSVLRDNDGK-SRGCAFVTFTNR 155
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A H+ +T+ G S+PL VK+AD + ++
Sbjct: 156 SCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDK 189
>gi|74148402|dbj|BAE36341.1| unnamed protein product [Mus musculus]
Length = 238
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 141 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 200
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 201 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 238
>gi|194380292|dbj|BAG63913.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 183 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 242
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 243 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 280
>gi|9581852|gb|AAF89096.1|AF169013_1 RNA binding protein NAPOR-3, partial [Rattus norvegicus]
Length = 226
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 129 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 188
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 189 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 226
>gi|194386824|dbj|BAG59778.1| unnamed protein product [Homo sapiens]
Length = 314
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 217 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 276
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 277 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 314
>gi|431917652|gb|ELK16917.1| CUG-BP- and ETR-3-like factor 2 [Pteropus alecto]
Length = 443
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 346 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 405
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 406 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 443
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 45/178 (25%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A NA HN KTLPG P+Q+K AD E
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSE--------------------------------- 100
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
S GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 101 ----------KSNGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 148
>gi|194380550|dbj|BAG58428.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 306 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 365
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 366 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 403
>gi|355562286|gb|EHH18880.1| hypothetical protein EGK_19447, partial [Macaca mulatta]
gi|355782632|gb|EHH64553.1| hypothetical protein EGM_17798, partial [Macaca fascicularis]
Length = 433
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 336 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 395
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 396 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 433
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Query: 55 SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPK 112
S GCCFV +R+ A +A NA HN KTLPG P+Q+K AD E + KLFIGM+ K
Sbjct: 1 SVGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 60
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
+E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG
Sbjct: 61 KCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGC 120
Query: 173 SVPLVVKWADTEKERQ 188
S P+VVK+ADT+K+++
Sbjct: 121 SSPIVVKFADTQKDKE 136
>gi|358414907|ref|XP_003582947.1| PREDICTED: CUGBP Elav-like family member 2-like [Bos taurus]
Length = 398
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 301 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 360
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 361 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 398
>gi|350589633|ref|XP_003482886.1| PREDICTED: CUGBP Elav-like family member 2-like [Sus scrofa]
Length = 270
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 175 AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 234
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 235 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 270
>gi|334348392|ref|XP_001367508.2| PREDICTED: CUGBP Elav-like family member 2-like [Monodelphis
domestica]
Length = 575
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 478 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 537
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 538 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 575
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 87/133 (65%), Gaps = 2/133 (1%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVS 115
CCFV +R+ A +A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +
Sbjct: 146 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN 205
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++ ++ MEG S P
Sbjct: 206 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKTMHQSQTMEGCSSP 265
Query: 176 LVVKWADTEKERQ 188
+VVK+ADT+K+++
Sbjct: 266 IVVKFADTQKDKE 278
>gi|432089211|gb|ELK23234.1| CUGBP Elav-like family member 2 [Myotis davidii]
Length = 331
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 234 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 293
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 294 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 331
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
V K E + MF F ++E I++ SRGC FV +R A A+ A H +T
Sbjct: 2 VSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAFVTFSTRAMAQNAIKAMHQSQT 60
Query: 82 LPGASSPLQVKYADGELER 100
+ G SSP+ VK+AD + ++
Sbjct: 61 MEGCSSPIVVKFADTQKDK 79
>gi|444724379|gb|ELW64984.1| CUGBP Elav-like family member 2 [Tupaia chinensis]
Length = 585
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 488 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 547
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 548 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 585
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 110/197 (55%), Gaps = 21/197 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGC------------ 58
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+G
Sbjct: 98 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGLKSEPQKLELEAL 157
Query: 59 --CFVICPSR---QEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLP 111
C + PS+ +++ K P+Q+K AD E + KLFIGM+
Sbjct: 158 SKCGLSDPSKAFGMALIRSLTDIDGSKKKDKMHHPIQMKPADSEKSNAVEDRKLFIGMVS 217
Query: 112 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG
Sbjct: 218 KKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEG 277
Query: 172 SSVPLVVKWADTEKERQ 188
S P+VVK+ADT+K+++
Sbjct: 278 CSSPIVVKFADTQKDKE 294
>gi|62088448|dbj|BAD92671.1| BRUNO-like 6 RNA-binding protein variant [Homo sapiens]
Length = 305
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 156/339 (46%), Gaps = 49/339 (14%)
Query: 110 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF-LKYETKEQALAALEAINGKHK 168
LP E S L+ + + + ++TS C+ L ++ L A
Sbjct: 3 LPVRAEERTESCLWGCWASSR-------VRRTSDACSSPLATSRSARSCGVLTA-----P 50
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
++G+S LVVK ADT++ER RR Q+ HP+ LP+G Y
Sbjct: 51 VKGASSSLVVKLADTDRERALRRMQQMAGHLGAF------HPA---PLPLGACGAY---- 97
Query: 229 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 288
+ + Q L PG + Q + S + + PP
Sbjct: 98 ---TTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP---- 150
Query: 289 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ- 343
GSG +PGL P P G+ G PL N PGS + +P + S G Q
Sbjct: 151 GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQ 206
Query: 344 -------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 396
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFV
Sbjct: 207 AYAGMHHYAGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 266
Query: 397 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
S+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 267 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 305
>gi|310689905|pdb|3NMR|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
gi|310689907|pdb|3NNA|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
Length = 175
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A
Sbjct: 4 IKXFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 63
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q K AD E + KLFIG + K +E ++ FS +G I+
Sbjct: 64 QNALHNXKVLPGXHHPIQXKPADSEKNNAVEDRKLFIGXISKKCTENDIRVXFSSFGQIE 123
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ +ILRG S+GCAF+ + T+ A A++A + EG S P VVK+AD
Sbjct: 124 ECRILRGPDGLSRGCAFVTFTTRAXAQTAIKAXHQAQTXEGCSSPXVVKFAD 175
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 5 KXFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 64
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ K AD+EK
Sbjct: 65 NALHNXKVLPGXHHPIQXKPADSEK 89
>gi|221060510|ref|XP_002260900.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193810974|emb|CAQ42872.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 497
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV VPK++TE + ++F+E+ + +V IKDK +R FV S A KA+
Sbjct: 74 IKLFVSSVPKNLTENDIKSIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQ 133
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK L PL VK+A GELE+ E KLF+G LPK ++E ++ LF+
Sbjct: 134 DLHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFN 193
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +E + P+ V++A+T+
Sbjct: 194 RYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAEKPIEVRFAETK 253
Query: 185 KERQARR 191
+ Q ++
Sbjct: 254 NQLQEKQ 260
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
++ GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++
Sbjct: 380 NEVSGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNV 439
Query: 402 ASAQNAIAMMNG 413
SA NA+ MNG
Sbjct: 440 DSAINAVKYMNG 451
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
++E KLFVG +PK + E Q+ +F + V EV I+K+ + S+ C FV +++
Sbjct: 167 ANENEAKLFVGSLPKEIAEEQIRNLFNRYGNVTEVYIMKN-SNGVSKRCAFVNYAYKEQG 225
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF 106
A+ + K + A P++V++A+ + + E +L
Sbjct: 226 IFAIQNLNGKIAIENAEKPIEVRFAETKNQLQEKQLL 262
>gi|255548387|ref|XP_002515250.1| RNA binding protein, putative [Ricinus communis]
gi|223545730|gb|EEF47234.1| RNA binding protein, putative [Ricinus communis]
Length = 564
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 111/176 (63%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV VP T + +F+ + EV + +D+ + +G CFV + +EAD+A+
Sbjct: 132 VKLFVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCFVKYATIEEADRAIR 191
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A + + T+PG PL+V+YAD E ERL KL++G + K S+ E+ +FS YG ++D
Sbjct: 192 ALNGQYTIPGEVHPLKVRYADRERERLCKVVDKLYVGCINKQASKQEIEEIFSPYGHVED 251
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I+R + + S+GCAF+K +++A+AA++A++G M G PL+VK+AD +K R
Sbjct: 252 VYIVRDNLKQSRGCAFVKLPDRDKAVAAIKALHGTFTMRGCDQPLIVKFADPKKRR 307
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETK 153
D L+ KLF+ +P + + LF +G+I ++ + R + +G F+KY T
Sbjct: 124 DHNLDAASVKLFVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCFVKYATI 183
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
E+A A+ A+NG++ + G PL V++AD E+ER + K
Sbjct: 184 EEADRAIRALNGQYTIPGEVHPLKVRYADRERERLCKVVDK 224
>gi|149022604|gb|EDL79498.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 478
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 331 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 389
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 432
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR N
Sbjct: 390 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDN 439
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 40/179 (22%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRS--------------------- 52
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+P Q K + + KLFIGM+ K +E ++ +FS +G I++
Sbjct: 53 -------------QNPPQSKAVE------DRKLFIGMISKKCTENDIRVMFSSFGQIEEC 93
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 94 RILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 152
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ K+ E+R KLF+G + K TE + MF F ++E I++ SRGC FV +R
Sbjct: 57 QSKAVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAFVTFTTR 114
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 115 TMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 153
>gi|148695565|gb|EDL27512.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Mus
musculus]
Length = 478
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 323 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 382
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 331 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 389
Query: 383 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 432
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR N
Sbjct: 390 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDN 439
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 40/179 (22%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRS--------------------- 52
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+P Q K + + KLFIGM+ K +E ++ +FS +G I++
Sbjct: 53 -------------QNPPQSKAVE------DRKLFIGMISKKCTENDIRVMFSSFGQIEEC 93
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 94 RILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 152
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ K+ E+R KLF+G + K TE + MF F ++E I++ SRGC FV +R
Sbjct: 57 QSKAVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAFVTFTTR 114
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 115 TMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 153
>gi|410911840|ref|XP_003969398.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 458
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 97/142 (68%), Gaps = 1/142 (0%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R+ A A NA H +KTLPG + P+QVK AD E R + KLF+GML K ++
Sbjct: 55 GCAFLTYCARESALIAQNALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTD 113
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
A+V +F +G+I++ +LRG TSKGCAF+KY++ +A AA+ A++G + G+S L
Sbjct: 114 ADVRKMFEPFGSIEECTVLRGPDGTSKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSL 173
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+AD+EKER RR Q+ SQ
Sbjct: 174 VVKFADSEKERSLRRMQQVASQ 195
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 368 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 427
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 428 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+A + MF+ F ++E +++ D T S+GC FV S EA A+
Sbjct: 101 KLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGT---SKGCAFVKYQSNAEAQAAI 157
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
+A H +TLPGASS L VK+AD E ER
Sbjct: 158 SALHGSRTLPGASSSLVVKFADSEKER 184
>gi|84999108|ref|XP_954275.1| ribonucleoprotein [Theileria annulata]
gi|65305273|emb|CAI73598.1| ribonucleoprotein, putative [Theileria annulata]
Length = 515
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 114/180 (63%), Gaps = 13/180 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV ++PK E+ L +F+EF +V +V +I+DKT+ A + C FV S +AD AV
Sbjct: 117 IKLFVARIPKTHEESDLRRLFEEFGVVKDVIVIRDKTSNAHKNCAFVKMASICQADAAVR 176
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+N++ + + +Q++YA GE+ERL E KLF+G LPK+++E ++S+L
Sbjct: 177 RLNNQRVIDSSLGAVQIRYATGEVERLGFTQMAGEPGVDEAKLFVGSLPKSLTEEDLSSL 236
Query: 123 FSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F +G ++ +L+ + +KGC F+K + KEQAL A++ +NGK +EGS PL V++A
Sbjct: 237 FKEFGEAMEVFVLKDLACGGNKGCGFVKMKYKEQALHAIKELNGKKMLEGSVRPLEVRFA 296
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 59/86 (68%)
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 409
++LFI+HIP ++ + +L F FGRV+ A++ VD++T SK + FVSY++P SA A+A
Sbjct: 430 SSLFIFHIPPQWNNNDLFRTFSPFGRVVQARIAVDRSTNRSKGYAFVSYDNPESATQAVA 489
Query: 410 MMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG + GKKL+V K N ++ PY
Sbjct: 490 NMNGFTIMGKKLRVNYKTTNNRSNPY 515
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ KLFVG +PK +TE L ++FKEF EV ++KD ++GC FV +++A A
Sbjct: 215 DEAKLFVGSLPKSLTEEDLSSLFKEFGEAMEVFVLKDLACGGNKGCGFVKMKYKEQALHA 274
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + KK L G+ PL+V++A
Sbjct: 275 IKELNGKKMLEGSVRPLEVRFA 296
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
+E KLF+ +PK E+++ LF +G +KD+ ++R + K CAF+K + QA AA
Sbjct: 115 VEIKLFVARIPKTHEESDLRRLFEEFGVVKDVIVIRDKTSNAHKNCAFVKMASICQADAA 174
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKER 187
+ +N + ++ S + +++A E ER
Sbjct: 175 VRRLNNQRVIDSSLGAVQIRYATGEVER 202
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 343 QIEGPPG---ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
Q+ G PG A LF+ +P+ +++L + F+ FG + V D A G +K GFV +
Sbjct: 207 QMAGEPGVDEAKLFVGSLPKSLTEEDLSSLFKEFGEAMEVFVLKDLACGGNKGCGFVKMK 266
Query: 400 SPASAQNAIAMMNGCQL 416
A +AI +NG ++
Sbjct: 267 YKEQALHAIKELNGKKM 283
>gi|355677611|gb|AER96039.1| CUG triplet repeat, RNA binding protein 2 [Mustela putorius furo]
Length = 346
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 75/97 (77%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 250 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 309
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
Y++P SAQ AI MNG Q+G K+LKVQLKR +KP
Sbjct: 310 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKP 346
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 6 CAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 49
>gi|449460564|ref|XP_004148015.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449522952|ref|XP_004168489.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 307
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
Query: 22 VPKHMTE--AQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNK 79
VP H E + +F+ + E+ I++DK T +G CFV + EAD+A+ A N+
Sbjct: 3 VPFHKFEWNVSIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQ 62
Query: 80 KTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
T PG +P+ VKYAD E +RL KL++G L KN ++ E+ +FS YG ++D+ I+R
Sbjct: 63 YTFPGELTPINVKYADSEKDRLGVLEKLYVGCLNKNTTKREIEEVFSPYGFVEDIYIIRD 122
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ S+G AF+KY ++ ALAA++A+NG M G PL+V+ AD +K R
Sbjct: 123 DLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPR 172
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+S+K++ E KL+VG + K+ T+ ++ +F + V+++ II+D + SRG FV
Sbjct: 77 ADSEKDRLGVLE--KLYVGCLNKNTTKREIEEVFSPYGFVEDIYIIRDD-LKQSRGSAFV 133
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL 101
R A A+ A + T+ G PL V+ AD + R+
Sbjct: 134 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRI 173
>gi|294873439|ref|XP_002766628.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239867660|gb|EEQ99345.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 372
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 181/410 (44%), Gaps = 77/410 (18%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+DEV I+KD+ T+ SRG FV E A+ A N TLP ++ PL V YA GE ER
Sbjct: 10 IDEVFIMKDRETQESRGLAFVRFRDLAEGQNAIAAL-NGTTLPESARPLTVIYAQGEAER 68
Query: 101 L------------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFL 148
L + KL++ L + E+ +F +G + ++ + AF+
Sbjct: 69 LGLTKETPGMRSEDTKLYVAGLGPSTEAVELRKIFEPFGRVTEVHV----PGPHALYAFV 124
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQ 208
++ ++ A+ A+ +NG+ ++EGS L VK AD R R
Sbjct: 125 RFAEEKDAMRAISDVNGRVQVEGSQRMLEVKVADPSSSRGPTRR---------------- 168
Query: 209 HPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQN--QPGFHGIIPPVNQGNAMRG 266
P G PP + YG A Y P N G+ P+N + M G
Sbjct: 169 --------PSGSLPPVSSYGSPAGNGYDHTPSVQPRFVNGMSQGYGQASTPLN--STMAG 218
Query: 267 ASP-DLSSNMGPRN--YAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSP 323
+ S +G +AM + + + + PM + +P
Sbjct: 219 DTQGQCSRTIGAWTEYFAMDGTPYYHNSQSNTVQWELPMEFK----------------NP 262
Query: 324 AVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 383
+ A++ P Q +GP GAN+FI+ +P + + +L F FG ++SAKV V
Sbjct: 263 SAAHTVP------------QAKGPAGANIFIFSVPDAWTEMDLRQHFGLFGNIVSAKVVV 310
Query: 384 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQL-GGKKLKVQLKRDNKQN 432
DK TG+S+ +GF+SY++ SA+ A+ M+G G+K+KVQ+K+ N
Sbjct: 311 DKQTGISRGYGFISYDNCDSAERAVQTMDGYMAPTGRKIKVQIKKGEGSN 360
>gi|83273948|ref|XP_729621.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23487965|gb|EAA21186.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana-related
[Plasmodium yoelii yoelii]
Length = 507
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 112/187 (59%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV +PK++TE + +F+E+ +V IKDK A+R FV S A KA+
Sbjct: 78 VKLFVSSIPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFVRMESIYFAQKAIE 137
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK + + PL VK+A GELE+ E KLF+G LPK++++ ++ +F+
Sbjct: 138 DLHGKKIICESLGPLIVKFAIGELEKYGINMNNANENEAKLFVGSLPKDITDDQIRNIFN 197
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG +K++ I++ S SK CAF+ Y+ KEQ + A++ +NGK +E + P+ V++A ++
Sbjct: 198 RYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAIENAEKPIEVRFAQSK 257
Query: 185 KERQARR 191
+ Q R+
Sbjct: 258 NQLQERQ 264
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
++ GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++
Sbjct: 390 NEVSGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAYIATEKDTGRNRGFAFVSYDNV 449
Query: 402 ASAQNAIAMMNG 413
SA NA+ MNG
Sbjct: 450 DSAINAVKYMNG 461
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK +T+ Q+ +F + V EV I+K+ + S+ C FV +++ AV
Sbjct: 177 KLFVGSLPKDITDDQIRNIFNRYGNVKEVYIMKN-SNGVSKRCAFVNYDYKEQGIFAVQN 235
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLF 106
+ K + A P++V++A + + E +L
Sbjct: 236 LNGKIAIENAEKPIEVRFAQSKNQLQERQLL 266
>gi|68069003|ref|XP_676412.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496097|emb|CAH95360.1| conserved hypothetical protein [Plasmodium berghei]
Length = 506
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 112/187 (59%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV +PK++TE + +F+E+ +V IKDK A+R FV S A KA+
Sbjct: 78 VKLFVSSIPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFVRMESIYFAQKAIE 137
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK + + PL VK+A GELE+ E KLF+G LPK++++ ++ +F+
Sbjct: 138 DLHGKKIICESLGPLIVKFAIGELEKYGINMNNANENEAKLFVGSLPKDITDDQIRNIFN 197
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG +K++ I++ S SK CAF+ Y+ KEQ + A++ +NGK +E + P+ V++A ++
Sbjct: 198 RYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAIENAEKPIEVRFAQSK 257
Query: 185 KERQARR 191
+ Q R+
Sbjct: 258 NQLQERQ 264
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++ SA
Sbjct: 393 GPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAYIATEKDTGRNRGFAFVSYDNVDSAI 452
Query: 406 NAIAMMNG 413
NA+ MNG
Sbjct: 453 NAVKYMNG 460
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK +T+ Q+ +F + V EV I+K+ + S+ C FV +++ AV
Sbjct: 177 KLFVGSLPKDITDDQIRNIFNRYGNVKEVYIMKN-SNGVSKRCAFVNYDYKEQGIFAVQN 235
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGML 110
+ K + A P++V++A + + E +L +L
Sbjct: 236 LNGKIAIENAEKPIEVRFAQSKNQLQERQLLNRVL 270
>gi|395729854|ref|XP_002810281.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 3
[Pongo abelii]
Length = 478
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 122/240 (50%), Gaps = 54/240 (22%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCA------------------------FLKYE------------TKEQA 156
+LRG TSKGCA L++E + QA
Sbjct: 125 TVLRGPDGTSKGCASFEILGFYHRHCKCSNLVFILLTLVLRFEAHHEDWGVGAGVVRGQA 184
Query: 157 L-------AALEAINGKH-----------KMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+ L A+ + + +G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 185 MPWGWNGNQVLRALGRRDPDPAPLTCVWARAQGASSSLVVKFADTEKERGLRRMQQVATQ 244
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 381 VFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+FVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 424 IFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 478
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 404 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|389585865|dbj|GAB68595.1| RNA binding protein, partial [Plasmodium cynomolgi strain B]
Length = 508
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV +PK +TE + +F+E+ + +V IKDK +R FV S A KA+
Sbjct: 85 IKLFVSSIPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQ 144
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK L PL VK+A GELE+ E KLF+G LPK ++E ++ LF+
Sbjct: 145 DLHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFN 204
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +E + P+ V++A+T+
Sbjct: 205 RYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAEKPIEVRFAETK 264
Query: 185 KERQARR 191
+ Q ++
Sbjct: 265 NQLQEKQ 271
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
++ GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++
Sbjct: 391 NEVSGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNV 450
Query: 402 ASAQNAIAMMNG 413
SA NA+ MNG
Sbjct: 451 DSAINAVKYMNG 462
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
++E KLFVG +PK + E Q+ +F + V EV I+K+ + S+ C FV +++
Sbjct: 178 ANENEAKLFVGSLPKEIAEEQIRNLFNRYGNVTEVYIMKN-SNGVSKRCAFVNYAYKEQG 236
Query: 70 DKAVNACHNKKTLPGASSPLQVKYAD 95
A+ + K + A P++V++A+
Sbjct: 237 IFAIQNLNGKIAIENAEKPIEVRFAE 262
>gi|359323408|ref|XP_854054.3| PREDICTED: CUGBP, Elav-like family member 6 [Canis lupus
familiaris]
Length = 413
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 100/159 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
+ +LR TSKGCAF+K+ ++ +A AA+++++G M
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTM 200
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 321 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 380
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 381 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 413
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK A +E + R+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGRGEDRK 135
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 48 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 107
>gi|426334349|ref|XP_004028716.1| PREDICTED: CUGBP Elav-like family member 1-like [Gorilla gorilla
gorilla]
Length = 104
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 73/94 (77%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
G EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P
Sbjct: 11 GYFEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNP 70
Query: 402 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 71 VSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 104
>gi|297275765|ref|XP_002801068.1| PREDICTED: CUGBP Elav-like family member 5-like [Macaca mulatta]
Length = 473
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 148/307 (48%), Gaps = 63/307 (20%)
Query: 170 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 229
+G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 189 QGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY-- 235
Query: 230 QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
+ LMQ + + + + P V +S N P P SG
Sbjct: 236 ----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHS 289
Query: 290 S---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NP 330
G AVPGL P+ P+PGG H L + G V SP VA + +P
Sbjct: 290 PPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLHP 346
Query: 331 STS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELGN 368
+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 347 AFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQ 406
Query: 369 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 407 MFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRP 466
Query: 429 NKQNKPY 435
PY
Sbjct: 467 KDPGHPY 473
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEA 117
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 16 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSEE 75
Query: 118 EVSALFSIYGTIKDLQILRGSQQTSKG 144
+V LF +G I + +LRG +SKG
Sbjct: 76 DVLRLFQPFGVIDECTVLRGPDGSSKG 102
>gi|156083038|ref|XP_001609003.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis T2Bo]
gi|154796253|gb|EDO05435.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis]
Length = 420
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 12/185 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV ++PK EA++ MF+EF V +V II+DK T A + C FV S +AD A+
Sbjct: 24 IKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADAAIK 83
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+N + A + VKYA GE ERL + KLF+G +PKN E + +
Sbjct: 84 RLNNNCVVDTALGAVLVKYASGETERLGFTSLVGEPGVNDAKLFVGSIPKNAEEDLIREI 143
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F YGT++D+ I++ KGCAF+K KEQ L A+ +++G ++EG P+ V++A+
Sbjct: 144 FGPYGTLEDIFIMKDQNGAGKGCAFVKMAYKEQGLYAIRSLDGMKQLEGCPRPMEVRFAE 203
Query: 183 TEKER 187
++ +
Sbjct: 204 SKANK 208
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GPPGANLFI+HIP E+ +L + F FG++LS+++ D++TG K + FVSY++P SA
Sbjct: 283 GPPGANLFIFHIPNEWTHHDLVHTFSQFGKILSSRIASDRSTGRHKGYAFVSYDTPESAA 342
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
AI +NG + GK+LKV +K+ ++ P
Sbjct: 343 QAIQHLNGFTVLGKRLKVTIKKGDESTVP 371
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
+E KLF+ +PK EAE+ +F +G +KD+ I+R + K CAF++ + QA AA
Sbjct: 22 VEIKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADAA 81
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKER 187
++ +N ++ + ++VK+A E ER
Sbjct: 82 IKRLNNNCVVDTALGAVLVKYASGETER 109
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LF+ IP+ + + E+ F+ FG V + DKAT KC FV S + A
Sbjct: 21 PVEIKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADA 80
Query: 407 AIAMMN 412
AI +N
Sbjct: 81 AIKRLN 86
>gi|95007487|emb|CAJ20709.1| RNA binding protein, putative [Toxoplasma gondii RH]
gi|221480877|gb|EEE19298.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221501598|gb|EEE27368.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 475
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 13/186 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+ M +A L +F+EF V E II+DK T + F+ S AD A+
Sbjct: 37 IKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIR 96
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ + L + P+ VKYA GE E+L + KLFIG +P+ ++E EV
Sbjct: 97 GLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPGQDQAKLFIGSIPRTMTEEEVRQF 156
Query: 123 FSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH EG + P+ V++A
Sbjct: 157 FSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHTFEGCTRPVEVRFA 216
Query: 182 DTEKER 187
+++ R
Sbjct: 217 ESKAAR 222
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGPPGAN+F++H+P E+ +L F FG V+SA+V D+ TG ++ F FVSY++ SA
Sbjct: 340 EGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDNVESA 399
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
A+ MNG GGK+LKV +K+ +Q
Sbjct: 400 ATAVNNMNGFMAGGKRLKVSVKKGEEQ 426
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+++ KLF+G +P+ MTE ++ F + V+EV ++KD +GCCFV ++EA
Sbjct: 134 QDQAKLFIGSIPRTMTEEEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
AV K T G + P++V++A+ + R
Sbjct: 194 AVRTLSGKHTFEGCTRPVEVRFAESKAAR 222
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALA 158
R+E KLF+G +P+++ +A + +F +G +K+ I+R + K AF+K ++ A A
Sbjct: 34 RVEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADA 93
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKER 187
A+ +N +E S P+ VK+A E E+
Sbjct: 94 AIRGLNSTRILEQSMGPITVKYATGEAEK 122
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV VP T L+ F F V + D+TT +RG FV S + A A
Sbjct: 347 IFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFV---SYDNVESAATAV 403
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
+N L+V GE + ++H L
Sbjct: 404 NNMNGFMAGGKRLKVSVKKGEEQYVQHLL 432
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LF+ +PQ D L F+ FG V A + DKATG K F+ +S A+A AI +
Sbjct: 39 LFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIRGL 98
Query: 412 NGCQL 416
N ++
Sbjct: 99 NSTRI 103
>gi|269868303|gb|ACZ52456.1| Bruno-3 transcript variant 4 [Drosophila persimilis]
Length = 407
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------RQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIVNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIVNLHGSQTMPGASSSLVVKYADTEKER 125
>gi|157108555|ref|XP_001650282.1| hypothetical protein AaeL_AAEL000695 [Aedes aegypti]
gi|108884042|gb|EAT48267.1| AAEL000695-PA [Aedes aegypti]
Length = 368
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 79/107 (73%)
Query: 329 NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 388
NP+ + + +G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T
Sbjct: 262 NPTMAQAVAAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQTN 321
Query: 389 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SKCFGFVS+++ ASAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 322 LSKCFGFVSFDNVASAQAAIQAMHGFQIGTKRLKVQLKRSKDASKPY 368
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 70/101 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K E +V LFS +G+I++ +LR + SKGCAF+ + TK+ A+ A++
Sbjct: 3 ERKLFVGMLSKKYHENDVRHLFSGHGSIEECTVLRDTSGQSKGCAFVTFATKQAAIGAIK 62
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
+++ MEG S PLVVK+ADT+K++ A+R Q+ QS N+
Sbjct: 63 SLHQSKTMEGCSAPLVVKFADTQKDKDAKRMQQMQSNLWNI 103
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EER KLFVG + K E + +F ++E +++D T+ S+GC FV ++Q A
Sbjct: 2 EER-KLFVGMLSKKYHENDVRHLFSGHGSIEECTVLRD-TSGQSKGCAFVTFATKQAAIG 59
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
A+ + H KT+ G S+PL VK+AD + ++
Sbjct: 60 AIKSLHQSKTMEGCSAPLVVKFADTQKDK 88
>gi|194752425|ref|XP_001958523.1| GF10965 [Drosophila ananassae]
gi|190625805|gb|EDV41329.1| GF10965 [Drosophila ananassae]
Length = 422
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 288 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 337
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 338 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 397
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 398 MNGFQIGMKRLKVQLKRPKDASRPY 422
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|198463676|ref|XP_002135559.1| bruno-3 [Drosophila pseudoobscura pseudoobscura]
gi|198151365|gb|EDY74186.1| bruno-3 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 287 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 336
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 337 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 396
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 397 MNGFQIGMKRLKVQLKRPKDASRPY 421
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 100
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 101 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 139
>gi|386769529|ref|NP_001245999.1| bruno-2, isoform H [Drosophila melanogaster]
gi|386769535|ref|NP_001246002.1| bruno-2, isoform J [Drosophila melanogaster]
gi|226371828|gb|ACO51539.1| MIP06224p [Drosophila melanogaster]
gi|383291457|gb|AFH03673.1| bruno-2, isoform H [Drosophila melanogaster]
gi|383291460|gb|AFH03676.1| bruno-2, isoform J [Drosophila melanogaster]
Length = 651
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 319 GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 378
G+ S V S +++G TG QIEGP G+NLFIYH+PQEF D +L + F FG VLS
Sbjct: 537 GAASQPVTTSALQAAAAGVTGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLS 594
Query: 379 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 595 AKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 651
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 139 ERKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIK 198
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALP 217
A++ MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A
Sbjct: 199 ALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATA 258
Query: 218 MGYAPPYNG 226
+ APP G
Sbjct: 259 LIAAPPSAG 267
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++Q A A
Sbjct: 139 ER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGA 196
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 197 IKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 229
>gi|24663908|ref|NP_729923.1| bruno-3, isoform A [Drosophila melanogaster]
gi|194870535|ref|XP_001972671.1| GG13757 [Drosophila erecta]
gi|195327422|ref|XP_002030418.1| GM24582 [Drosophila sechellia]
gi|195494162|ref|XP_002094720.1| GE20053 [Drosophila yakuba]
gi|16648344|gb|AAL25437.1| LD31834p [Drosophila melanogaster]
gi|23093534|gb|AAF49798.2| bruno-3, isoform A [Drosophila melanogaster]
gi|190654454|gb|EDV51697.1| GG13757 [Drosophila erecta]
gi|194119361|gb|EDW41404.1| GM24582 [Drosophila sechellia]
gi|194180821|gb|EDW94432.1| GE20053 [Drosophila yakuba]
gi|220945994|gb|ACL85540.1| bru-3-PA [synthetic construct]
gi|220955812|gb|ACL90449.1| bru-3-PA [synthetic construct]
Length = 422
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 288 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 337
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 338 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 397
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 398 MNGFQIGMKRLKVQLKRPKDASRPY 422
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|320545833|ref|NP_001189095.1| bruno-3, isoform H [Drosophila melanogaster]
gi|318069196|gb|ADV37531.1| bruno-3, isoform H [Drosophila melanogaster]
Length = 416
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 282 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 331
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 332 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 391
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 392 MNGFQIGMKRLKVQLKRPKDASRPY 416
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 148
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 149 SPYGAYAQL 157
>gi|237844787|ref|XP_002371691.1| CELF family protein, putative [Toxoplasma gondii ME49]
gi|211969355|gb|EEB04551.1| CELF family protein, putative [Toxoplasma gondii ME49]
Length = 475
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 13/186 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+ M +A L +F+EF V E II+DK T + F+ S AD A+
Sbjct: 37 IKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIR 96
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ + L + P+ VKYA GE E+L + KLFIG +P+ ++E EV
Sbjct: 97 GLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPGQDQAKLFIGSIPRTMTEDEVRQF 156
Query: 123 FSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH EG + P+ V++A
Sbjct: 157 FSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHTFEGCTRPVEVRFA 216
Query: 182 DTEKER 187
+++ R
Sbjct: 217 ESKAAR 222
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGPPGAN+F++H+P E+ +L F FG V+SA+V D+ TG ++ F FVSY++ SA
Sbjct: 340 EGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDNVESA 399
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
A+ MNG GGK+LKV +K+ +Q
Sbjct: 400 ATAVNNMNGFMAGGKRLKVSVKKGEEQ 426
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+++ KLF+G +P+ MTE ++ F + V+EV ++KD +GCCFV ++EA
Sbjct: 134 QDQAKLFIGSIPRTMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
AV K T G + P++V++A+ + R
Sbjct: 194 AVRTLSGKHTFEGCTRPVEVRFAESKAAR 222
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALA 158
R+E KLF+G +P+++ +A + +F +G +K+ I+R + K AF+K ++ A A
Sbjct: 34 RVEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADA 93
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKER 187
A+ +N +E S P+ VK+A E E+
Sbjct: 94 AIRGLNSTRILEQSMGPITVKYATGEAEK 122
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV VP T L+ F F V + D+TT +RG FV S + A A
Sbjct: 347 IFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFV---SYDNVESAATAV 403
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
+N L+V GE + ++H L
Sbjct: 404 NNMNGFMAGGKRLKVSVKKGEEQYVQHLL 432
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LF+ +PQ D L F+ FG V A + DKATG K F+ +S A+A AI +
Sbjct: 39 LFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIRGL 98
Query: 412 NGCQL 416
N ++
Sbjct: 99 NSTRI 103
>gi|442632161|ref|NP_001261807.1| bruno-3, isoform N [Drosophila melanogaster]
gi|442632163|ref|NP_001261808.1| bruno-3, isoform O [Drosophila melanogaster]
gi|440215743|gb|AGB94500.1| bruno-3, isoform N [Drosophila melanogaster]
gi|440215744|gb|AGB94501.1| bruno-3, isoform O [Drosophila melanogaster]
Length = 403
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 269 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 318
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 319 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 378
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 379 MNGFQIGMKRLKVQLKRPKDASRPY 403
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 20 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 79
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 80 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 135
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 25 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 83
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 84 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 120
>gi|170592252|ref|XP_001900883.1| RNA recognition motif. [Brugia malayi]
gi|158591750|gb|EDP30354.1| RNA recognition motif [Brugia malayi]
Length = 487
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
Query: 326 ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 385
A+S P+T + T SGGQ +GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK
Sbjct: 364 ASSTPNTGMN--TTSGGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDK 421
Query: 386 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
T +SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K +KPY
Sbjct: 422 QTNLSKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDSKPY 470
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E + +F++F V ++N+++DK T+ SRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLFIGML K ++E +V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFIGMLNKKLTEDDVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSK 143
+L+ S+ S+
Sbjct: 139 TVLKDSEGKSR 149
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
K+F+G +P++ E E LF +G++ L +LR QTS+GC F+ Y + A+AA A
Sbjct: 23 KMFVGQIPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAAQAA 82
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQAR 190
++ + P+ +K AD E + +
Sbjct: 83 LHNIRVLPQMYHPVQMKPADIENRNERK 110
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTY 70
>gi|269868305|gb|ACZ52457.1| Bruno-3 transcript variant 4 [Drosophila persimilis]
Length = 407
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQAMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H + +PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQAMPGASSSLVVKYADTEKER 125
>gi|269868150|gb|ACZ52381.1| Bruno-3 transcript variant 11 [Drosophila pseudoobscura]
Length = 376
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 242 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 291
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 292 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 351
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 352 MNGFQIGMKRLKVQLKRPKDASRPY 376
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 37 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 96
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 97 RRMQQMAGHMNLL 109
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 40 LVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE 99
L++ +K + GC FV ++QEA A+ H +T+PGASS L VKYAD E E
Sbjct: 34 LMNRALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKE 93
Query: 100 R 100
R
Sbjct: 94 R 94
>gi|320545827|ref|NP_001189092.1| bruno-3, isoform E [Drosophila melanogaster]
gi|318069193|gb|ADV37528.1| bruno-3, isoform E [Drosophila melanogaster]
Length = 408
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 274 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 323
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 324 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 383
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 384 MNGFQIGMKRLKVQLKRPKDASRPY 408
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868142|gb|ACZ52377.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GRFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868140|gb|ACZ52376.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|294868388|ref|XP_002765513.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239865556|gb|EEQ98230.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 403
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 186/407 (45%), Gaps = 74/407 (18%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++EV I+KD+ T+ SRG FV E A+ A N LP ++ PL V YA GE ER
Sbjct: 43 IEEVFIMKDRETQESRGLAFVRFRDLAEGQNAIAAL-NGAILPESARPLTVIYAQGEAER 101
Query: 101 L------------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFL 148
L E KL++ L + E+ +F +G + ++ + G AF+
Sbjct: 102 LGLTKETPGMRSEETKLYVAGLGPSTEAVELRKIFEPFGRVTEVHVP-GPHAL---YAFV 157
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQ 208
++ ++ A+ A+ +NG+ ++EGS L VK AD R R
Sbjct: 158 RFAEEKDAMRAISDVNGRVQVEGSQRMLEVKVADPSSSRGPTRR---------------- 201
Query: 209 HPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGAS 268
P G PP + YG A Y P +Q P F + ++QG AS
Sbjct: 202 --------PSGSLPPVSSYGSPAGNGYD----HTPSVQ--PRF---VSGMSQGYGQ--AS 242
Query: 269 PDLSSNMGPRNYAMPPSGFVGSG--YPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVA 326
L+S M S +G+ Y A+ G Y H +N+ P +
Sbjct: 243 VPLNSTMAGDTQGQC-SRTIGAWTEYFAMDGTPYY---------HNSQSNTVQWELP-IE 291
Query: 327 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 386
NPS + +G GP GAN+FI+ +P + + +L F +FG ++SAKV VDK
Sbjct: 292 FKNPSAAHTG--------SGPAGANIFIFSVPDAWTEMDLRQHFGSFGNIVSAKVVVDKQ 343
Query: 387 TGVSKCFGFVSYESPASAQNAIAMMNGCQL-GGKKLKVQLKRDNKQN 432
TG+S+ +GF+SY++ SA+ A+ M+G G+K+KVQ+K+ N
Sbjct: 344 TGISRGYGFISYDNCDSAERAVQTMDGYMAPTGRKIKVQIKKGEGSN 390
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+F+ VP TE L F F + ++ DK T SRG F+ + A++AV
Sbjct: 309 IFIFSVPDAWTEMDLRQHFGSFGNIVSAKVVVDKQTGISRGYGFISYDNCDSAERAVQTM 368
Query: 77 HNKKTLPGASSPLQVKYADG 96
G +Q+K +G
Sbjct: 369 DGYMAPTGRKIKVQIKKGEG 388
>gi|156102324|ref|XP_001616855.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148805729|gb|EDL47128.1| RNA binding protein, putative [Plasmodium vivax]
Length = 507
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 10/186 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFV +PK +TE + +F+E+ + +V IKDK +R FV S A KA+
Sbjct: 87 KLFVSSIPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQD 146
Query: 76 CHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFSI 125
H KK L PL VK+A GELE+ E KLF+G LPK ++E ++ LF+
Sbjct: 147 LHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFNR 206
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +E + P+ V++A+T+
Sbjct: 207 YGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAEKPIEVRFAETKN 266
Query: 186 ERQARR 191
+ Q ++
Sbjct: 267 QLQEKQ 272
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
++ GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++
Sbjct: 390 NEVSGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNV 449
Query: 402 ASAQNAIAMMNG 413
SA NA+ MNG
Sbjct: 450 DSAINAVKYMNG 461
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
++E KLFVG +PK + E Q+ +F + V EV I+K+ + S+ C FV +++
Sbjct: 179 ANENEAKLFVGSLPKEIAEEQIRNLFNRYGNVTEVYIMKN-SNGVSKRCAFVNYAYKEQG 237
Query: 70 DKAVNACHNKKTLPGASSPLQVKYAD 95
A+ + K + A P++V++A+
Sbjct: 238 IFAIQNLNGKIAIENAEKPIEVRFAE 263
>gi|298710157|emb|CBJ31867.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 400
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 178/377 (47%), Gaps = 58/377 (15%)
Query: 86 SSPLQVKYAD-GELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG 144
S P ++ D ++ + KLF+GM PK+ E + A+F +GT D+ ++R SKG
Sbjct: 41 SRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKG 100
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPN 204
CAF++YE+ + A A+EA++ KH M G LVV AD + Q ++ + + +
Sbjct: 101 CAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGS 160
Query: 205 ADSQHPSLFGALPMGYAPPYNGYGYQASG-----SYG--LMQYRLPPMQNQPGFHGIIPP 257
D LF AL + P + G + G S G + Q R Q G P
Sbjct: 161 GDG----LFRAL----SRPSSFMGSDSGGGGTIPSLGNVVGQNRSTVTAPQAGATAFAPT 212
Query: 258 VNQGNAMRGASPDLSSNMGPRNYAM----PPSGFVGSGYPAVPG--LQYPM---PYPGGM 308
V G+ G S L S M Y + PP G YP VP +Q+ P G
Sbjct: 213 VAPGS---GPSSGLLSGM---PYFLCGGNPPQGTY-VYYPYVPSSSVQHDTGSSAAPAG- 264
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSGGT--------------GSGG----------QI 344
+G +P +++ SPAV N++ + G G+GG Q
Sbjct: 265 IGAKP-HHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQS 323
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
GP GANLF+Y++P D +L AF FG VLSAKV+ D+ TG SK FGFVSY P A
Sbjct: 324 VGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEA 383
Query: 405 QNAIAMMNGCQLGGKKL 421
+ AI+ MNG +G K L
Sbjct: 384 EAAISSMNGFFIGQKFL 400
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ +++ KLFVG PK E A+F+ F ++ +I+D+ S+GC FV S + A
Sbjct: 54 TDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNG-FSKGCAFVRYESVKSA 112
Query: 70 DKAVNACHNKKTLPGASSPLQVKYAD 95
A+ A H+K +PG L V AD
Sbjct: 113 SDAIEALHDKHIMPGGFRTLVVTVAD 138
>gi|269785109|ref|NP_001161510.1| bruno-like protein [Saccoglossus kowalevskii]
gi|268053989|gb|ACY92481.1| bruno-like protein [Saccoglossus kowalevskii]
Length = 485
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 75/104 (72%)
Query: 332 TSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 391
T S T Q EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SK
Sbjct: 382 TQQSNVTMPTQQREGPEGCNLFIYHLPQEFGDAELMQMFMPFGNVISSKVFVDRATNQSK 441
Query: 392 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
CFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR NKPY
Sbjct: 442 CFGFVSFDNPASAQGAIQAMNGFQIGMKRLKVQLKRPKDANKPY 485
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K MTE + A+F+ F ++E I++ S+GC FV S+
Sbjct: 116 DSESRAEDRKLFVGMLNKQMTEDDVRAIFQPFGKIEECTILRGPDG-VSKGCAFVKFGSK 174
Query: 67 QEADKAVNACHNKKTLP-GASSPLQVKYADGELERLEHKL 105
QEA A+N + +TLP GASS + VK+AD E ER ++
Sbjct: 175 QEALAAINNINGSRTLPQGASSAIVVKFADTEKERQIRRM 214
>gi|194761394|ref|XP_001962914.1| GF19661 [Drosophila ananassae]
gi|190616611|gb|EDV32135.1| GF19661 [Drosophila ananassae]
Length = 229
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 135 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 194
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 195 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 229
>gi|195590112|ref|XP_002084791.1| GD12651 [Drosophila simulans]
gi|194196800|gb|EDX10376.1| GD12651 [Drosophila simulans]
Length = 616
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 482 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 531
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 532 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 591
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 592 MNGFQIGMKRLKVQLKRPKDASRPY 616
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 84 GASSPLQVK---YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
G S PL+ A + L+ KLF+GML K +E +V +F +GTI++ ILRG
Sbjct: 227 GESEPLETLGSIIAKDPFKHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG 286
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
SKGCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N
Sbjct: 287 ASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMN 346
Query: 201 NL 202
L
Sbjct: 347 LL 348
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ AS+GC FV S+QEA A+
Sbjct: 250 KLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKFGSQQEAQSAITN 308
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+PGASS L VKYAD E ER
Sbjct: 309 LHGSQTMPGASSSLVVKYADTEKER 333
>gi|158293699|ref|XP_315047.4| AGAP004950-PA [Anopheles gambiae str. PEST]
gi|157016572|gb|EAA10371.5| AGAP004950-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 284 PSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQ 343
P+G + A PG+Q PYPG + P ++ +A P+ G
Sbjct: 207 PNGDAALPHAAYPGIQ---PYPG-VAYPAVYGQFPQAIPQPIAAVAPAQREDMLMFPGCS 262
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PAS
Sbjct: 263 ISGPEGCNLFIYHLPQEFGDGELMQMFMPFGTVISSKVFIDRATNQSKCFGFVSFDNPAS 322
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 323 AQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 354
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ AS+GC FV S QEA A+ +
Sbjct: 4 KLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDG-ASKGCAFVKFTSHQEAQAAITS 62
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 63 LHGSQTMPGASSSLVVKFADTEKERQLRRM 92
>gi|269868315|gb|ACZ52462.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTLREDFLMFPGCSISGPEGC 277
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868190|gb|ACZ52401.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 362
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIADLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIADLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868158|gb|ACZ52385.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 362
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAESESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAESESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|427786275|gb|JAA58589.1| Putative cugbp elav-like family member 1 [Rhipicephalus pulchellus]
Length = 219
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G Q+EGP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 125 GKQVEGPEGANLFIYHLPQEFTDSDLAQTFMPFGNVISAKVFIDKQTNLSKCFGFVSYDN 184
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 185 SLSAQAAIQAMNGFQIGTKRLKVQLKRSKDASKPY 219
>gi|269868317|gb|ACZ52463.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+AD EKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADAEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADAEKER 80
>gi|269868311|gb|ACZ52460.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868156|gb|ACZ52384.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
gi|269868192|gb|ACZ52402.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
gi|269868313|gb|ACZ52461.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|320545843|ref|NP_001189100.1| bruno-3, isoform M [Drosophila melanogaster]
gi|318069201|gb|ADV37536.1| bruno-3, isoform M [Drosophila melanogaster]
Length = 370
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 236 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 285
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 286 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 345
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 346 MNGFQIGMKRLKVQLKRPKDASRPY 370
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 80
>gi|195171586|ref|XP_002026586.1| GL21647 [Drosophila persimilis]
gi|194111502|gb|EDW33545.1| GL21647 [Drosophila persimilis]
Length = 458
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 324 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 373
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 374 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 433
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 434 MNGFQIGMKRLKVQLKRPKDASRPY 458
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G M
Sbjct: 71 VRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQTM 121
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
+ ++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC
Sbjct: 41 LKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGC 97
Query: 59 CFVICPSRQEADKAVNACHNKKTLP 83
FV ++QEA A+ H +T+P
Sbjct: 98 AFVKFGTQQEAQSAIANLHGSQTMP 122
>gi|156368353|ref|XP_001627659.1| predicted protein [Nematostella vectensis]
gi|156214575|gb|EDO35559.1| predicted protein [Nematostella vectensis]
Length = 383
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G+NLFIYH+PQEF D +L FQ FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 291 QKEGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVM 350
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQNAI MNG Q+G K+LKVQLKR N+PY
Sbjct: 351 SAQNAIQHMNGFQIGAKRLKVQLKRPKDANRPY 383
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 23/156 (14%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ E L +F+ + + E+ I+KDK T +G + C + Q+
Sbjct: 20 VKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKG--WDACNAAQKH----- 72
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
H KKTLPG + KLF+GM+ K+ E ++ +FS +GTI++L +
Sbjct: 73 -LHEKKTLPGMD---------------DRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 116
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
LR + TSKGCAF+K+ + QA A+ ++ ME
Sbjct: 117 LRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTME 152
>gi|28574919|ref|NP_524059.4| bruno-3, isoform B [Drosophila melanogaster]
gi|23093533|gb|AAF49799.2| bruno-3, isoform B [Drosophila melanogaster]
Length = 363
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 229 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 278
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 279 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 338
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 339 MNGFQIGMKRLKVQLKRPKDASRPY 363
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 80
>gi|170061983|ref|XP_001866472.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880043|gb|EDS43426.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 359
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%)
Query: 328 SNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 387
+NP+ + + +G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T
Sbjct: 252 ANPTMAQAVAAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQT 311
Query: 388 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SKCFGFVS+++ ASAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 312 NLSKCFGFVSFDNGASAQAAIQAMHGFQIGTKRLKVQLKRSKDASKPY 359
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +E +V LFS +G+I++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 3 ERKLFVGMLSKKYNENDVRQLFSGHGSIEECTVLRDPSGQSKGCAFVTFATKQAAIGAIK 62
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A++ MEG S PLVVK+ADT+K++ A+R Q+ QS N+
Sbjct: 63 ALHQSKTMEGCSAPLVVKFADTQKDKDAKRMQQMQSNLWNI 103
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K E + +F ++E +++D + + S+GC FV ++Q A A+ A
Sbjct: 5 KLFVGMLSKKYNENDVRQLFSGHGSIEECTVLRDPSGQ-SKGCAFVTFATKQAAIGAIKA 63
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H KT+ G S+PL VK+AD + ++
Sbjct: 64 LHQSKTMEGCSAPLVVKFADTQKDK 88
>gi|269868200|gb|ACZ52406.1| Bruno-3 transcript variant 20 [Drosophila pseudoobscura]
Length = 356
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 222 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 271
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 272 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 331
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 332 MNGFQIGMKRLKVQLKRPKDASRPY 356
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 140 QTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQA 199
++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 27 ESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHM 86
Query: 200 NNL 202
N L
Sbjct: 87 NLL 89
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 21 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 74
>gi|403296214|ref|XP_003939012.1| PREDICTED: CUGBP Elav-like family member 5 [Saimiri boliviensis
boliviensis]
Length = 363
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 56 RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 13 HGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQS 72
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 73 EEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 132
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 133 LVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY 173
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 61 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 119
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 120 LHGSQTMPGASSSLVVKFADTDKERTLRRM 149
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 394 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
GFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 322 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 363
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
RG+Q GCAFL Y ++ A+ A A++ + + G + P+ VK AD+E R+
Sbjct: 6 RGAQWLVHGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRK 61
>gi|427786277|gb|JAA58590.1| Putative cugbp elav-like family member 1 [Rhipicephalus pulchellus]
Length = 211
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G Q+EGP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 117 GKQVEGPEGANLFIYHLPQEFTDSDLAQTFMPFGNVISAKVFIDKQTNLSKCFGFVSYDN 176
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 177 SLSAQAAIQAMNGFQIGTKRLKVQLKRSKDASKPY 211
>gi|195020121|ref|XP_001985125.1| GH14684 [Drosophila grimshawi]
gi|195378885|ref|XP_002048212.1| GJ13842 [Drosophila virilis]
gi|193898607|gb|EDV97473.1| GH14684 [Drosophila grimshawi]
gi|194155370|gb|EDW70554.1| GJ13842 [Drosophila virilis]
Length = 421
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 87/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 287 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 336
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 337 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 396
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 397 MNGFQIGMKRLKVQLKRPKDASRPY 421
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|198474574|ref|XP_002132714.1| GA25731 [Drosophila pseudoobscura pseudoobscura]
gi|198138448|gb|EDY70116.1| GA25731 [Drosophila pseudoobscura pseudoobscura]
Length = 574
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 480 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 539
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 540 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 574
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 60/86 (69%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A+++++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKSLHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQK 194
MEG S PLVVK+ADT+KE+ ++ Q+
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQ 86
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ + H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKSLHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|444509480|gb|ELV09276.1| CUGBP Elav-like family member 5, partial [Tupaia chinensis]
Length = 329
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 91/146 (62%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSE 60
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 61 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 120
Query: 177 VVKWADTEKERQARRAQKAQSQANNL 202
VVK+ADT+KER RR Q+ Q L
Sbjct: 121 VVKFADTDKERTLRRMQQMVGQLGIL 146
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 48 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 106
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 107 LHGSQTMPGASSSLVVKFADTDKERTLRRM 136
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 394 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
GFVS+++PASA+ AI MNG Q+G K+LKVQLKR PY
Sbjct: 288 GFVSFDNPASARAAIQAMNGFQVGAKRLKVQLKRPKDPGHPY 329
>gi|124808251|ref|XP_001348269.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23497160|gb|AAN36708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 514
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 10/186 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV +PK++TE + ++F+E+ + +V IKDK +R FV S KA+
Sbjct: 54 IKLFVSSIPKNLTEEDIKSIFQEYGNIQDVVFIKDKKPNVNRSNVFVRMESIFYGQKAIK 113
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H K+TL PL VK+A GELE+ E KLF+G LPK ++E E+ LF+
Sbjct: 114 DLHGKRTLCETLGPLIVKFAIGELEKYGVNMNNANENEAKLFVGSLPKEITEEELRELFN 173
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK E + P+ V++A+T+
Sbjct: 174 RYGNVTEVYIMKNSNGISKRCAFVNYAYKEQGIFAIQNMNGKIATENAEKPIEVRFAETK 233
Query: 185 KERQAR 190
+ Q +
Sbjct: 234 NQLQEK 239
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
+I GP GAN+FI+HIP E+ +L +AF FG ++SA + ++ TG ++ F FVSY++
Sbjct: 397 NEITGPVGANIFIFHIPNEWIQTDLLSAFSPFGNIISAHIATERDTGRNRGFAFVSYDNV 456
Query: 402 ASAQNAIAMMNG 413
SA NA+ MNG
Sbjct: 457 DSAINAVKYMNG 468
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK +TE +L +F + V EV I+K+ + S+ C FV +++ A+
Sbjct: 153 KLFVGSLPKEITEEELRELFNRYGNVTEVYIMKN-SNGISKRCAFVNYAYKEQGIFAIQN 211
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLF 106
+ K A P++V++A+ + + E LF
Sbjct: 212 MNGKIATENAEKPIEVRFAETKNQLQEKHLF 242
>gi|432944122|ref|XP_004083333.1| PREDICTED: CUGBP Elav-like family member 2-like [Oryzias latipes]
Length = 578
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 489 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 548
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 549 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 578
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 137/275 (49%), Gaps = 57/275 (20%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 53 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 112
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 113 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 172
Query: 129 IKDLQILRGSQQTSKGC------------------------AFLK--------------- 149
I++ +ILRG S+G FL+
Sbjct: 173 IEECRILRGPDGLSRGRLQAALQVFARIHLAEVRPVGTLFPVFLRLSADSVCPHRPRLLL 232
Query: 150 -------YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
++T+ ++L A E + EG S P+VVK+ADT+K+++ RR Q+ +Q
Sbjct: 233 IQAFSPDFDTQMESLFADEIVG-----EGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQ 287
Query: 203 PNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
N+ + SL G G P Y QA+ S L
Sbjct: 288 LNSATTWGSLTGL--GGLTPQYLALLQQATSSGNL 320
>gi|195148190|ref|XP_002015057.1| GL18622 [Drosophila persimilis]
gi|194107010|gb|EDW29053.1| GL18622 [Drosophila persimilis]
Length = 398
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 304 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 363
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 364 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 398
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
S+ ER KLFVG + K + E + +F+ ++E +++D+ + S+GC FV ++ A
Sbjct: 26 SAGER-KLFVGMLNKKLNENDVRKLFEVHGNIEECTVLRDQNGQ-SKGCAFVTFATKHAA 83
Query: 70 DKAVNACHNK-KTLPGASSPLQVKYADGELERLEHKL 105
A+ ++ K + G +SPL VK+AD + E+ + K+
Sbjct: 84 ISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKI 120
>gi|432862983|ref|XP_004069969.1| PREDICTED: CUGBP Elav-like family member 2-like [Oryzias latipes]
Length = 462
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ TE +L +F+ F V ++NI++D+ S+GCCFV +R+ A
Sbjct: 44 DAIKMFVGQIPRSWTETELKELFEPFGAVYQINILRDRAQNPPQSKGCCFVTFYTRKAAL 103
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E EV +FS +G
Sbjct: 104 EAQNALHNIKTLSGMHHPIQMKPADSEKTTAVEDRKLFIGMVSKKYGENEVRMMFSSFGQ 163
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
I++ +ILRG S+GCAF+ + T+ A A++ ++ ME
Sbjct: 164 IEECRILRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTME 205
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E ++ MF F ++E I++ + SRGC F
Sbjct: 124 MKPADSEKTTAVEDRKLFIGMVSKKYGENEVRMMFSSFGQIEECRILRGPDGQ-SRGCAF 182
Query: 61 VICPSRQEADKAVNACHNKKTL 82
V +R A A+ H+ +T+
Sbjct: 183 VTFATRAMAQNAIKTMHHSQTM 204
>gi|390176612|ref|XP_002132720.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858697|gb|EDY70122.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 818
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 724 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 783
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 784 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 818
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y+D E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 351 VTYSDKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 410
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 411 FFTRRAALKAQDALHNVKTLAGMYHPIQMKPADSENRNERK 451
>gi|357623706|gb|EHJ74750.1| hypothetical protein KGM_06214 [Danaus plexippus]
Length = 283
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 89/149 (59%), Gaps = 24/149 (16%)
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
F G YPAV G Q+P P P M +++PA G I G
Sbjct: 159 FPGVAYPAVYG-QFPQPIPPPM----------STIAPA-------------QREGCSISG 194
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ
Sbjct: 195 PEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQA 254
Query: 407 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 255 AIQAMNGFQIGMKRLKVQLKRPKDANRPY 283
>gi|397492762|ref|XP_003817289.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Pan paniscus]
gi|426331467|ref|XP_004026702.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Gorilla
gorilla gorilla]
Length = 417
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK AD E + KLF+GML K ++
Sbjct: 2 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 61
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S L
Sbjct: 62 EDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSL 121
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+ADTEKER RR Q+ +Q
Sbjct: 122 VVKFADTEKERGLRRMQQVATQ 143
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 327 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 386
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 387 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 417
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 40 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 96
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 97 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 132
>gi|289547602|ref|NP_001166119.1| CUGBP Elav-like family member 3 isoform 2 [Homo sapiens]
Length = 418
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK AD E + KLF+GML K ++
Sbjct: 2 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 61
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S L
Sbjct: 62 EDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSL 121
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+ADTEKER RR Q+ +Q
Sbjct: 122 VVKFADTEKERGLRRMQQVATQ 143
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 328 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 387
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 388 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 418
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 40 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 96
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 97 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 132
>gi|403276014|ref|XP_003929712.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 368
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PA
Sbjct: 276 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPA 335
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 336 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 368
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 19 EDRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 78 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 110
>gi|19912828|dbj|BAB88676.1| Cs-ETR1 [Ciona savignyi]
Length = 116
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 321 VSPAV-ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 379
V+P + A+ P+ + T + Q EGP G NLFIYH+PQEF D +L N FQ FG V+SA
Sbjct: 1 VAPGLPASQLPANAMLTSTTNAPQKEGPEGCNLFIYHLPQEFSDADLANVFQPFGNVISA 60
Query: 380 KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KVF+D+AT SKCFGFVS+++ S+Q AI MNG Q+G K+LKVQLKR +Q++PY
Sbjct: 61 KVFIDRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY 116
>gi|440586603|emb|CCK33023.1| RRM domain protein Bruno, partial [Platynereis dumerilii]
Length = 154
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 72/96 (75%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 59 AGKQTEGPDGANLFIYHLPQEFADHDLMQMFMPFGTVVSAKVFIDKQTNLSKCFGFVSYD 118
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SAQ AI MNG Q+G K+LKVQLKR KPY
Sbjct: 119 NPVSAQAAIQAMNGFQIGMKRLKVQLKRPKSDAKPY 154
>gi|269868186|gb|ACZ52399.1| Bruno-3 transcript variant 14 [Drosophila pseudoobscura]
Length = 373
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 87/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P + P +A P+ G I GP G
Sbjct: 239 GLPPFPGVAFPAVY----------GQFPQVLPPPLAAVAPTQREDFLMFPGCSISGPEGC 288
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 289 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIRA 348
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 349 MNGFQIGMKRLKVQLKRPKDASRPY 373
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 48 GCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 106
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER ++
Sbjct: 40 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQM 99
Query: 109 MLPKNVSEAEVSALFSIYG 127
N+ VS FS YG
Sbjct: 100 AGHMNLLNPFVSNQFSPYG 118
>gi|156347048|ref|XP_001621619.1| hypothetical protein NEMVEDRAFT_v1g144256 [Nematostella vectensis]
gi|156207744|gb|EDO29519.1| predicted protein [Nematostella vectensis]
Length = 159
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G+NLFIYH+PQEF D +L FQ FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 67 QKEGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVM 126
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQNAI MNG Q+G K+LKVQLKR N+PY
Sbjct: 127 SAQNAIQHMNGFQIGAKRLKVQLKRPKDANRPY 159
>gi|348583729|ref|XP_003477625.1| PREDICTED: CUGBP Elav-like family member 6-like [Cavia porcellus]
Length = 472
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 380 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 439
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 440 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 472
>gi|269868194|gb|ACZ52403.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 362
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT +KCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQNKCFGFVSFDNPASAQAAIQA 337
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|195472359|ref|XP_002088468.1| GE18585 [Drosophila yakuba]
gi|194174569|gb|EDW88180.1| GE18585 [Drosophila yakuba]
Length = 508
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 414 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 473
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 474 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 508
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
M+G S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MDGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NG 226
G
Sbjct: 121 AG 122
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTMD 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|241723820|ref|XP_002404307.1| conserved hypothetical protein [Ixodes scapularis]
gi|215505391|gb|EEC14885.1| conserved hypothetical protein [Ixodes scapularis]
Length = 284
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVS+++PA
Sbjct: 192 QREGPEGCNLFIYHLPQEFGDAELMQMFMPFGNVISAKVFIDRATNQSKCFGFVSFDNPA 251
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 252 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 284
>gi|390176614|ref|XP_003736147.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858698|gb|EIM52220.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 595
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 501 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 560
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 561 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 595
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y+D E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 128 VTYSDKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 187
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 188 FFTRRAALKAQDALHNVKTLAGMYHPIQMKPADSENRNERK 228
>gi|260787638|ref|XP_002588859.1| hypothetical protein BRAFLDRAFT_60030 [Branchiostoma floridae]
gi|229274030|gb|EEN44870.1| hypothetical protein BRAFLDRAFT_60030 [Branchiostoma floridae]
Length = 164
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PA
Sbjct: 72 QKEGPEGCNLFIYHLPQEFGDAELMQMFMPFGNVISAKVFVDRATNQSKCFGFVSFDNPA 131
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 132 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 164
>gi|71032751|ref|XP_766017.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352974|gb|EAN33734.1| RNA-binding protein, putative [Theileria parva]
Length = 539
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 118/202 (58%), Gaps = 24/202 (11%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV ++PK E+ L +F+EF V +V +I+DK T + + C FV S +AD AV
Sbjct: 137 IKLFVARIPKTYEESDLRRLFQEFGPVKDVIVIRDKVTNSHKNCAFVKMASICQADAAVR 196
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+N++ + + +Q++YA GE+ERL E KLF+G LPK+++E ++++L
Sbjct: 197 RLNNQRVIDSSLGAVQIRYATGEVERLGFTQMAGEPGMDEAKLFVGSLPKSLTEDDLASL 256
Query: 123 FSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F +G ++ +L+ + +KGC F+K + KEQAL A++ +NGK +EGS PL V++A
Sbjct: 257 FKDFGEPLEVFVLKDLTCGGNKGCGFVKMKYKEQALYAIKELNGKKMLEGSIRPLEVRFA 316
Query: 182 -----------DTEKERQARRA 192
D E R+ RA
Sbjct: 317 MNKTGVSGQAQDFESRRKRSRA 338
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LFI+HIP ++ + +L F FGRV+ A++ +D++T SK + FVSY++P SA A+A M
Sbjct: 456 LFIFHIPPQWNNNDLFRTFSPFGRVVQARIAIDRSTNRSKGYAFVSYDNPESATQAVANM 515
Query: 412 NGCQLGGKKLKVQLKRDNKQNKPY 435
NG + GKKL+V K N ++ PY
Sbjct: 516 NGFTIMGKKLRVNYKTTNNRSNPY 539
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ KLFVG +PK +TE L ++FK+F EV ++KD T ++GC FV +++A A
Sbjct: 235 DEAKLFVGSLPKSLTEDDLASLFKDFGEPLEVFVLKDLTCGGNKGCGFVKMKYKEQALYA 294
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + KK L G+ PL+V++A
Sbjct: 295 IKELNGKKMLEGSIRPLEVRFA 316
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 343 QIEGPPG---ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
Q+ G PG A LF+ +P+ + +L + F+ FG L V D G +K GFV +
Sbjct: 227 QMAGEPGMDEAKLFVGSLPKSLTEDDLASLFKDFGEPLEVFVLKDLTCGGNKGCGFVKMK 286
Query: 400 SPASAQNAIAMMNGCQL 416
A AI +NG ++
Sbjct: 287 YKEQALYAIKELNGKKM 303
>gi|322798836|gb|EFZ20383.1| hypothetical protein SINV_80350 [Solenopsis invicta]
Length = 385
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 74/98 (75%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
T + QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 288 TSTDKQIEGPEGCNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVS 347
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++ +SAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 348 YDNASSAQAAIQTMHGFQIGMKRLKVQLKRSKDASKPY 385
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 62/94 (65%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 94
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSAYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|62088108|dbj|BAD92501.1| trinucleotide repeat containing 4 variant [Homo sapiens]
Length = 441
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK AD E + KLF+GML K ++
Sbjct: 25 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 84
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S L
Sbjct: 85 EDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSL 144
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+ADTEKER RR Q+ +Q
Sbjct: 145 VVKFADTEKERGLRRMQQVATQ 166
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 351 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 410
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 411 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 441
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 63 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 119
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 120 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 155
>gi|269868178|gb|ACZ52395.1| Bruno-3 transcript variant 5 [Drosophila pseudoobscura]
Length = 401
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 316
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 317 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 376
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 377 MNGFQIGMKRLKVQLKRPKDASRPY 401
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|193204848|ref|NP_001122629.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
gi|351063344|emb|CCD71499.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
Length = 535
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 431 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 490
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 491 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD--RGNPY 533
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
+LR S+GCAF+ + + A+ A + ++ ME
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTME 209
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|157103910|ref|XP_001648180.1| deadenylation factor EDEN-BP, putative [Aedes aegypti]
gi|108880459|gb|EAT44684.1| AAEL003979-PA, partial [Aedes aegypti]
Length = 285
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 81/124 (65%), Gaps = 6/124 (4%)
Query: 318 PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 371
PG PAV A P + + G I GP G NLFIYH+PQEFGD EL F
Sbjct: 162 PGVAYPAVYGQFPQAIPQPIATIAPAQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFM 221
Query: 372 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 222 PFGTVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDA 281
Query: 432 NKPY 435
N+PY
Sbjct: 282 NRPY 285
>gi|269868144|gb|ACZ52378.1| Bruno-3 transcript variant 5 [Drosophila pseudoobscura]
Length = 401
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 316
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 317 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 376
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 377 MNGFQIGMKRLKVQLKRPKDASRPY 401
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|426233875|ref|XP_004010933.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Ovis aries]
Length = 451
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 359 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 418
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 419 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 451
>gi|307170912|gb|EFN63015.1| CUG-BP- and ETR-3-like factor 1 [Camponotus floridanus]
Length = 395
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 73/98 (74%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
T + QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 298 TNTDKQIEGPEGCNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVS 357
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++ SAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 358 YDNATSAQMAIQTMHGFQIGMKRLKVQLKRSKDASKPY 395
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSAYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|330864857|gb|AEC46884.1| FI14817p [Drosophila melanogaster]
Length = 302
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 168 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 217
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 218 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 277
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+L+VQLKR ++PY
Sbjct: 278 MNGFQIGMKRLEVQLKRPKDASRPY 302
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 1 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 34
>gi|269868188|gb|ACZ52400.1| Bruno-3 transcript variant 15 [Drosophila pseudoobscura]
Length = 370
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 242 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 285
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 286 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 345
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 346 MNGFQIGMKRLKVQLKRPKDASRPY 370
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 37 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 96
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 97 RRMQQMAGHMNLL 109
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 40 LVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE 99
L++ +K + GC FV ++QEA A+ H +T+PGASS L VKYAD E E
Sbjct: 34 LMNRALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKE 93
Query: 100 R 100
R
Sbjct: 94 R 94
>gi|321448797|gb|EFX61589.1| hypothetical protein DAPPUDRAFT_338859 [Daphnia pulex]
Length = 293
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 148/318 (46%), Gaps = 79/318 (24%)
Query: 170 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 229
+G+S LVVK+ADTEKE R+ ++ Q A N MG P+ +
Sbjct: 3 QGASSSLVVKFADTEKE---RQLRRMQQMAGN----------------MGLIHPFVFNQF 43
Query: 230 QASGSYG-LMQ--------------------------YRLPPMQNQPGFHGIIPPVNQGN 262
GSY L+Q ++PP +GI PVN G
Sbjct: 44 GTYGSYAQLVQQQAAIMAAASAAGGGAYIGAAPMAIATQIPPS----ALNGIASPVNGGL 99
Query: 263 AMR--------GASPDLSSNMGPRNYAMPPSGFVG--SGYPAVPGLQYPMPYP------- 305
+ G +P+ ++ N P S + G GYP+ + P+ +
Sbjct: 100 SSIPSPTMPNFGMAPNSANGQNGPNGQDPASVYNGLAQGYPS---RESPIMFKEETDAGC 156
Query: 306 --------GGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHI 357
++ +PL + V + +NP + G I GP G NLFIYH+
Sbjct: 157 AAALCVCVWSVISTKPLPTAENPVLSQIPLANPKPCQTT-ERKGCSISGPEGCNLFIYHL 215
Query: 358 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 417
PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G
Sbjct: 216 PQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIG 275
Query: 418 GKKLKVQLKRDNKQNKPY 435
K+LKVQLKR N+PY
Sbjct: 276 MKRLKVQLKRPKDANRPY 293
>gi|344284431|ref|XP_003413971.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Loxodonta africana]
Length = 499
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 407 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 466
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 467 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 499
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
SEE KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA
Sbjct: 149 DSEEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEA 207
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ H +T+ GASS L VK AD + ER ++
Sbjct: 208 QAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRM 243
>gi|24583879|ref|NP_723740.1| arrest, isoform D [Drosophila melanogaster]
gi|17946480|gb|AAL49272.1| RE72594p [Drosophila melanogaster]
gi|22946321|gb|AAN10813.1| arrest, isoform D [Drosophila melanogaster]
gi|220948776|gb|ACL86931.1| aret-PD [synthetic construct]
Length = 361
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 268 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 327
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 328 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 361
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 1 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 60
Query: 169 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 61 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 95
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNK-KTL 82
K + E + +F+ ++E +++D+ + S+GC FV ++ A A+ ++ K +
Sbjct: 4 KKLNENDVRKLFEVHGAIEECTVLRDQNGQ-SKGCAFVTFATKHAAISAIKVTLSQNKIM 62
Query: 83 PGASSPLQVKYADGELERLEHKL 105
G +SPL VK+AD + E+ + K+
Sbjct: 63 EGCTSPLVVKFADTQKEKEQKKI 85
>gi|344269048|ref|XP_003406367.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 1
[Loxodonta africana]
Length = 447
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 357 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 416
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 417 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
>gi|334325385|ref|XP_001367310.2| PREDICTED: CUGBP Elav-like family member 4-like [Monodelphis
domestica]
Length = 460
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 370 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 429
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 430 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 100 DSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSH 158
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 159 AEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 197
>gi|410960908|ref|XP_003987029.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Felis catus]
Length = 344
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 252 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 311
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 312 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ + H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQSLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|356483111|gb|AET11743.1| FI15316p1 [Drosophila melanogaster]
Length = 317
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 224 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 283
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 284 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 317
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 2 MEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 35
>gi|159163851|pdb|2CPZ|A Chain A, Solution Structure Of Rna Binding Domain 3 In Cug Triplet
Repeat Rna-Binding Protein 1
gi|255311729|pdb|2RQ4|A Chain A, Refinement Of Rna Binding Domain 3 In Cug Triplet Repeat
Rna-Binding Protein 1
gi|255311730|pdb|2RQC|A Chain A, Solution Structure Of Rna-Binding Domain 3 Of Cugbp1 In
Complex With Rna (Ug)3
Length = 115
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 331 STSSSGGT-----GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 385
S+ SSG T +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK
Sbjct: 2 SSGSSGLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDK 61
Query: 386 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +K
Sbjct: 62 QTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSK 109
>gi|410960910|ref|XP_003987030.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Felis catus]
Length = 443
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 351 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 410
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 411 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 443
>gi|335292430|ref|XP_003356729.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 2 [Sus scrofa]
Length = 344
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 252 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 311
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 312 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ + H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQSLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|301768673|ref|XP_002919757.1| PREDICTED: CUGBP Elav-like family member 6-like, partial
[Ailuropoda melanoleuca]
Length = 473
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 381 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 440
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 441 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 473
>gi|281340436|gb|EFB16020.1| hypothetical protein PANDA_008409 [Ailuropoda melanoleuca]
Length = 470
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 378 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 437
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 438 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 470
>gi|193204845|ref|NP_001022295.2| Protein ETR-1, isoform b [Caenorhabditis elegans]
gi|351063345|emb|CCD71500.1| Protein ETR-1, isoform b [Caenorhabditis elegans]
Length = 352
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 331 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 390
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 248 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 307
Query: 391 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 308 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD--RGNPY 350
>gi|432119145|gb|ELK38360.1| CUGBP Elav-like family member 6 [Myotis davidii]
Length = 416
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 324 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 383
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 384 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 416
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEAD 70
E KLFVG + K E + +F+ F ++E +++ D T S+GC FV S+ EA
Sbjct: 59 EDRKLFVGMLGKQQGEDDVRRLFQPFGHIEECTVLRSPDGT---SKGCAFVKFGSQGEAQ 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ + H +T+ GASS L VK AD + ER ++
Sbjct: 116 AAIQSLHGSRTMAGASSSLVVKLADTDRERALRRM 150
>gi|329663834|ref|NP_001192573.1| CUGBP Elav-like family member 6 [Bos taurus]
gi|296483717|tpg|DAA25832.1| TPA: trinucleotide repeat containing 4 (predicted)-like [Bos
taurus]
Length = 480
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 388 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 447
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 448 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 480
>gi|34526541|dbj|BAC85148.1| FLJ00324 protein [Homo sapiens]
Length = 376
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 284 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 343
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 344 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 376
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 27 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 85
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 86 IRGLHGSRTMAGASSSLVVKLADTDRERALRRM 118
>gi|34194499|gb|AAH33838.1| BRUNOL6 protein [Homo sapiens]
Length = 368
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 276 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 335
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 336 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 368
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 19 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 78 IRGLHGSRTMAGASSSLVVKLADTDRERALRRM 110
>gi|311260847|ref|XP_003128555.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 1 [Sus scrofa]
Length = 480
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 388 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 447
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 448 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 480
>gi|269868196|gb|ACZ52404.1| Bruno-3 transcript variant 19 [Drosophila pseudoobscura]
gi|269868198|gb|ACZ52405.1| Bruno-3 transcript variant 19 [Drosophila pseudoobscura]
Length = 356
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 271
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 272 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 331
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 332 MNGFQIGMKRLKVQLKRPKDASRPY 356
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|70780381|ref|NP_443072.3| CUGBP Elav-like family member 6 isoform 1 [Homo sapiens]
gi|74760888|sp|Q96J87.1|CELF6_HUMAN RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|15341327|gb|AAK95615.1|AF401233_1 BRUNO-like 6 RNA-binding protein [Homo sapiens]
gi|17046404|gb|AAL34513.1|AF425606_1 RNA-binding protein CELF6 [Homo sapiens]
gi|119598307|gb|EAW77901.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|397495530|ref|XP_003818605.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Pan paniscus]
Length = 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|194861272|ref|XP_001969746.1| GG23781 [Drosophila erecta]
gi|190661613|gb|EDV58805.1| GG23781 [Drosophila erecta]
Length = 163
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 73/96 (76%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY+
Sbjct: 68 TGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYD 127
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 128 NPHSANAAIQAMHGFQIGAKRLKVQLKRSKDAAKPY 163
>gi|302565316|ref|NP_001180884.1| CUGBP Elav-like family member 6 [Macaca mulatta]
Length = 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|410049377|ref|XP_003952740.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Pan
troglodytes]
Length = 369
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 277 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 336
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 337 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 369
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 19 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 78 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 110
>gi|426379617|ref|XP_004056488.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Gorilla
gorilla gorilla]
Length = 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|402874763|ref|XP_003901197.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Papio anubis]
gi|387542958|gb|AFJ72106.1| CUGBP Elav-like family member 6 isoform 1 [Macaca mulatta]
Length = 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|296213628|ref|XP_002753353.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Callithrix
jacchus]
Length = 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|332236062|ref|XP_003267224.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Nomascus
leucogenys]
Length = 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|297697028|ref|XP_002825676.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Pongo abelii]
Length = 466
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 374 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 433
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 466
>gi|351705755|gb|EHB08674.1| CUG-BP- and ETR-3-like factor 6, partial [Heterocephalus glaber]
Length = 393
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 301 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 360
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 361 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 393
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 45 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 103
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 104 IQGLHGSQTMAGASSSLVVKLADTDRERALRRM 136
>gi|119598306|gb|EAW77900.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|193784955|dbj|BAG54108.1| unnamed protein product [Homo sapiens]
Length = 342
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 250 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 309
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 310 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 342
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+ ++G
Sbjct: 1 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQK 194
M G+S LVVK ADT++ER RR Q+
Sbjct: 61 MAGASSSLVVKLADTDRERALRRMQQ 86
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K E + +F+ F ++E +++ S+GC FV S+ EA A+ H +T+
Sbjct: 4 KQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAAIRGLHGSRTMA 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK AD + ER ++
Sbjct: 63 GASSSLVVKLADTDRERALRRM 84
>gi|395822449|ref|XP_003784530.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Otolemur
garnettii]
Length = 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|363744095|ref|XP_003642971.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 496
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 406 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 465
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 466 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 496
>gi|351694709|gb|EHA97627.1| CUG-BP- and ETR-3-like factor 5, partial [Heterocephalus glaber]
Length = 300
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 101/172 (58%), Gaps = 12/172 (6%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQS 60
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 61 EEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 120
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
LVVK+ADT+KER RR Q+ Q L PSL ALP PY+ Y
Sbjct: 121 LVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--ALPFS---PYSAY 161
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 38 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 95
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 96 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 137
>gi|332021723|gb|EGI62079.1| CUG-BP- and ETR-3-like factor 2 [Acromyrmex echinatior]
Length = 405
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 73/98 (74%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
T + QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 308 TSTDKQIEGPEGCNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVS 367
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Y++ +SAQ AI M+G Q+G K+LKVQLKR KPY
Sbjct: 368 YDNASSAQAAIQTMHGFQIGMKRLKVQLKRSKDACKPY 405
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSAYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|21430058|gb|AAM50707.1| GM15173p [Drosophila melanogaster]
Length = 181
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 88 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 147
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 148 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 181
>gi|363744097|ref|XP_003642972.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 495
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 405 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 464
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 465 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 495
>gi|380800413|gb|AFE72082.1| CUGBP Elav-like family member 6 isoform 1, partial [Macaca mulatta]
Length = 245
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 153 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 212
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 213 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 245
>gi|118103583|ref|XP_424495.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 3 [Gallus
gallus]
Length = 492
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 402 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 461
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 462 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 492
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 315 NNSPGSVSPAVANSNPSTSS-------SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|363744104|ref|XP_003642974.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 491
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 401 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 460
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 315 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|195351039|ref|XP_002042044.1| GM26796 [Drosophila sechellia]
gi|195578729|ref|XP_002079216.1| GD23834 [Drosophila simulans]
gi|194123868|gb|EDW45911.1| GM26796 [Drosophila sechellia]
gi|194191225|gb|EDX04801.1| GD23834 [Drosophila simulans]
Length = 163
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 69 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 128
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 129 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 163
>gi|327285608|ref|XP_003227525.1| PREDICTED: CUGBP Elav-like family member 3-like [Anolis
carolinensis]
Length = 236
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 146 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 205
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 206 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 236
>gi|449514107|ref|XP_002187309.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Taeniopygia
guttata]
Length = 492
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 402 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 461
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 462 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 492
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 315 NNSPGSVSPAVANSNPSTSS-------SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|194389144|dbj|BAG61589.1| unnamed protein product [Homo sapiens]
Length = 145
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 91/137 (66%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +
Sbjct: 7 IKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQS 66
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI + +
Sbjct: 67 ALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTV 126
Query: 135 LRGSQQTSKGCAFLKYE 151
LRG TSKGCAF+K++
Sbjct: 127 LRGPDGTSKGCAFVKFQ 143
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK AD+E + R+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRK 96
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 403
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 404 AQNAI 408
AQ+A+
Sbjct: 64 AQSAL 68
>gi|345326924|ref|XP_003431098.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3
[Ornithorhynchus anatinus]
Length = 447
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 357 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 416
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 417 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
>gi|149638168|ref|XP_001508614.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1
[Ornithorhynchus anatinus]
Length = 446
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 356 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 415
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 446
>gi|345326922|ref|XP_003431097.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2
[Ornithorhynchus anatinus]
Length = 448
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 358 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 417
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 418 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 448
>gi|118103585|ref|XP_001231286.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Gallus
gallus]
Length = 504
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q +GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PA
Sbjct: 412 QRDGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPA 471
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 472 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 504
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 315 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 367
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 368 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|449282137|gb|EMC89034.1| CUG-BP- and ETR-3-like factor 4, partial [Columba livia]
Length = 361
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 271 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 330
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 331 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 361
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+
Sbjct: 8 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN 67
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 68 ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 104
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA A
Sbjct: 7 EDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQAA 65
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 66 INALHGSQTMPGASSSLVVKFADTDKERTMRRM 98
>gi|158288347|ref|XP_310221.4| AGAP009477-PA [Anopheles gambiae str. PEST]
gi|157019207|gb|EAA05917.4| AGAP009477-PA [Anopheles gambiae str. PEST]
Length = 373
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 279 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQTNLSKCFGFVSFDN 338
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+SAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 339 VSSAQAAIQAMHGFQIGTKRLKVQLKRSKDASKPY 373
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEA 162
KLF+GML K +E +V LFS +GTI++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 1 RKLFVGMLSKKYNENDVRQLFSGHGTIEECTVLRDPSGQSKGCAFVTFATKQAAIGAIKV 60
Query: 163 --INGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
++ MEG S PLVVK+ADT+KE+ A+R Q+ Q+
Sbjct: 61 SQLHQSKTMEGCSAPLVVKFADTQKEKDAKRMQQMQT 97
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA--V 73
KLFVG + K E + +F ++E +++D + + S+GC FV ++Q A A V
Sbjct: 2 KLFVGMLSKKYNENDVRQLFSGHGTIEECTVLRDPSGQ-SKGCAFVTFATKQAAIGAIKV 60
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
+ H KT+ G S+PL VK+AD + E+
Sbjct: 61 SQLHQSKTMEGCSAPLVVKFADTQKEK 87
>gi|2565067|gb|AAB91444.1| CAGH4 [Homo sapiens]
Length = 358
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 268 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 327
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 328 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 358
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 137 GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQ 196
G +KGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+
Sbjct: 22 GQMAPAKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVA 81
Query: 197 SQ 198
+Q
Sbjct: 82 TQ 83
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 55 SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++GC FV + EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 27 AKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 72
>gi|269868160|gb|ACZ52386.1| Bruno-3 transcript variant 19 [Drosophila pseudoobscura]
Length = 356
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 87/145 (60%), Gaps = 16/145 (11%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 271
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 272 NLFIYHLPQEFGDAELMQMFLPFGNVTSSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 331
Query: 411 MNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR ++PY
Sbjct: 332 MNGFQIGMKRLKVQLKRPKDASRPY 356
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|345311730|ref|XP_001520496.2| PREDICTED: CUGBP Elav-like family member 5-like, partial
[Ornithorhynchus anatinus]
Length = 219
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 129 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASA 188
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N PY
Sbjct: 189 QTAIQAMNGFQIGMKRLKVQLKRPKDANHPY 219
>gi|256052032|ref|XP_002569583.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350646169|emb|CCD59153.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 682
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 69/92 (75%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
+ GP G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++ S
Sbjct: 591 LTGPEGCNLFIYHLPQEFGDNELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNHTS 650
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AQNAI MNG Q+G K+LKVQLKR KPY
Sbjct: 651 AQNAIQAMNGFQIGMKRLKVQLKRPKDSRKPY 682
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K+ +E ++ LF+ YG I++ ILR SKGCAF+K+ + +A A++
Sbjct: 99 DRKLFVGMLGKHQTEKDIQNLFAPYGLIEECTILRDQNGLSKGCAFVKFSSSTEAANAID 158
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
++ M+G+S PLVVK+ADTEKERQ R+ Q QS N
Sbjct: 159 HMHNSQTMQGASSPLVVKFADTEKERQVRK-QHQQSTTN 196
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E KLFVG + KH TE + +F + L++E I++D+ S+GC FV S EA
Sbjct: 97 HEDRKLFVGMLGKHQTEKDIQNLFAPYGLIEECTILRDQN-GLSKGCAFVKFSSSTEAAN 155
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
A++ HN +T+ GASSPL VK+AD E ER
Sbjct: 156 AIDHMHNSQTMQGASSPLVVKFADTEKER 184
>gi|269868152|gb|ACZ52382.1| Bruno-3 transcript variant 12 [Drosophila pseudoobscura]
Length = 375
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 279 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 338
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 339 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 375
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868208|gb|ACZ52410.1| Bruno-3 transcript variant 30 [Drosophila pseudoobscura]
Length = 330
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 234 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 293
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 294 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 330
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|194385138|dbj|BAG60975.1| unnamed protein product [Homo sapiens]
Length = 260
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 170 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 229
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 230 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 260
>gi|45786151|gb|AAH68008.1| TNRC4 protein, partial [Homo sapiens]
Length = 407
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 317 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 376
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 377 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 407
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
R A KA +A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F
Sbjct: 1 RDSALKAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEP 59
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEK
Sbjct: 60 FGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEK 119
Query: 186 ERQARRAQKAQSQ 198
ER RR Q+ +Q
Sbjct: 120 ERGLRRMQQVATQ 132
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 38 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 94
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 95 NTLHSSRTLPGASSSLVVKFADTEKER 121
>gi|320545839|ref|NP_001189098.1| bruno-3, isoform K [Drosophila melanogaster]
gi|318069199|gb|ADV37534.1| bruno-3, isoform K [Drosophila melanogaster]
Length = 331
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 235 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 294
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 295 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 331
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 80
>gi|119573805|gb|EAW53420.1| trinucleotide repeat containing 4, isoform CRA_b [Homo sapiens]
Length = 353
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 263 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 322
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 323 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 353
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 122 LFSIYGTIKDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+F +GTI + +LRG TSKG CAF+K++T +A AA+ ++ + G+S LVVK+
Sbjct: 1 MFEPFGTIDECTVLRGPDGTSKGSCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKF 60
Query: 181 ADTEKERQARRAQKAQSQ 198
ADTEKER RR Q+ +Q
Sbjct: 61 ADTEKERGLRRMQQVATQ 78
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 34 MFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91
MF+ F +DE +++ D T++ S C FV + EA A+N H+ +TLPGASS L V
Sbjct: 1 MFEPFGTIDECTVLRGPDGTSKGS--CAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVV 58
Query: 92 KYADGELER 100
K+AD E ER
Sbjct: 59 KFADTEKER 67
>gi|269868164|gb|ACZ52388.1| Bruno-3 transcript variant 27 [Drosophila pseudoobscura]
Length = 341
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 245 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 304
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 305 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 341
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 40 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 91
>gi|269868204|gb|ACZ52408.1| Bruno-3 transcript variant 25 [Drosophila pseudoobscura]
Length = 347
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 251 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 310
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 311 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 46 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 97
>gi|119573804|gb|EAW53419.1| trinucleotide repeat containing 4, isoform CRA_a [Homo sapiens]
Length = 388
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 298 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 357
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 358 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 388
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF
Sbjct: 4 PIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 63 VKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 113
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 19 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 75
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 76 NTLHSSRTLPGASSSLVVKFADTEKER 102
>gi|47221605|emb|CAF97870.1| unnamed protein product [Tetraodon nigroviridis]
Length = 400
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D EL F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 310 EGPEGCNIFIYHLPQEFSDSELLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 369
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 370 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 400
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 55/215 (25%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 8 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 67
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E
Sbjct: 68 QSALHEQKTLPGMNRPIQVKPADSE----------------------------------- 92
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
RG GCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 93 --GRG------GCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 144
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ SQ +FG + + + P YN Y
Sbjct: 145 QQVASQLG-----------IFGPMTLNF-PAYNAY 167
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQ+A+
Sbjct: 12 LFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSAL 71
>gi|47219454|emb|CAG10818.1| unnamed protein product [Tetraodon nigroviridis]
Length = 413
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 323 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 382
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 383 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 413
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 43/186 (23%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 8 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 67
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E
Sbjct: 68 QNALHEQKTLPGMNRPIQVKPADSE----------------------------------- 92
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
RG GCAF+KY++ +A AA+ ++G + G+S LVVK+AD+EKER RR
Sbjct: 93 --SRG------GCAFVKYQSNAEAQAAINTLHGSRTLPGASSSLVVKFADSEKERSLRRM 144
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 145 QQVASQ 150
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 400
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 MKEPDAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 63
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
AQNA+ L G +Q+K + +++
Sbjct: 64 ALKAQNALHEQKT--LPGMNRPIQVKPADSESR 94
>gi|307193708|gb|EFN76391.1| CUG-BP- and ETR-3-like factor 1 [Harpegnathos saltator]
Length = 385
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ +
Sbjct: 293 QIEGPEGCNLFIYHLPQEFNDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVSYDNAS 352
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI M+G Q+G K+LKVQLKR KPY
Sbjct: 353 SAQAAIQTMHGFQIGMKRLKVQLKRSKDACKPY 385
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 63/94 (67%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS+YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSVYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSVYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|226371663|ref|NP_001139766.1| CUGBP Elav-like family member 4 isoform C [Mus musculus]
gi|27753638|gb|AAO22167.1| bruno-like 4 protein [Mus musculus]
Length = 495
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 405 EGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 464
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 465 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 495
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|21410087|gb|AAH30835.1| Bruno-like 6, RNA binding protein (Drosophila) [Homo sapiens]
Length = 481
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 70/93 (75%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LK QLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKAQLKRPKDANRPY 481
>gi|148664598|gb|EDK97014.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_e [Mus
musculus]
Length = 501
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 411 EGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 470
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 471 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 501
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 62 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 121
>gi|432881561|ref|XP_004073841.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 374
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 284 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 343
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 344 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 374
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 77/111 (69%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K ++A+V +F +G+I++ +LRG TSKGCAF
Sbjct: 4 PIQVKPADSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K+++ +A AA+ A++G + G+S LVVK+AD+EKER RR Q+ SQ
Sbjct: 64 VKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADSEKERGLRRMQQVASQ 114
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+A + MF+ F ++E +++ D T S+GC FV
Sbjct: 11 DSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGT---SKGCAFVKFQ 67
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 68 SNAEAQAAINALHGSRTLPGASSSLVVKFADSEKER 103
>gi|68072247|ref|XP_678037.1| RNA binding protein [Plasmodium berghei strain ANKA]
gi|56498375|emb|CAI00313.1| RNA binding protein, putative [Plasmodium berghei]
Length = 318
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 152/323 (47%), Gaps = 80/323 (24%)
Query: 112 KNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
KN++E + +FS+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +E
Sbjct: 1 KNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLE 60
Query: 171 GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQ 230
G + P+ V++A+ + +Q++
Sbjct: 61 GCNRPVEVRFAEPKSSKQSQS--------------------------------------- 81
Query: 231 ASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG---NAMRGASPDLSSNMGPRNYAMPPSGF 287
Q + P+QN P HGI P + G N G + +++N PR + +
Sbjct: 82 --------QLGIQPIQNAP--HGISPQAHPGTPNNINYGNNFGVNNNY-PRQVGVWKEYY 130
Query: 288 VGSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGG 342
G G P Q+ MP L +NN+P N S SS
Sbjct: 131 SGEGRPYYYNEQTNTTQWEMPKEFETLF---MNNNPNI-------HNLSDSS-------- 172
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
GPPGANLFI+H+P E+ +L AF FG +LSA++ +K TG ++ F FVSYE+
Sbjct: 173 ---GPPGANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYENIE 229
Query: 403 SAQNAIAMMNGCQLGGKKLKVQL 425
SA AI+ MNG KKLKV +
Sbjct: 230 SAAAAISQMNGFMALNKKLKVTV 252
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K++TE + MF + V+EV I+KD +T +GC FV +++A A+++ + KKTL
Sbjct: 1 KNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLE 60
Query: 84 GASSPLQVKYAD 95
G + P++V++A+
Sbjct: 61 GCNRPVEVRFAE 72
>gi|307175839|gb|EFN65654.1| CUG-BP- and ETR-3-like factor 4 [Camponotus floridanus]
Length = 278
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 76/106 (71%)
Query: 330 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 389
P T+ + G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT
Sbjct: 173 PMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFIDRATNQ 232
Query: 390 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 233 SKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDASRPY 278
>gi|226371659|ref|NP_001139764.1| CUGBP Elav-like family member 4 isoform A [Mus musculus]
gi|29387384|gb|AAH48405.1| Brunol4 protein [Mus musculus]
Length = 504
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 414 EGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 473
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 474 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 504
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|349802871|gb|AEQ16908.1| putative cug triplet rna binding protein 2 [Pipa carvalhoi]
Length = 90
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP GA+LFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 1 GPEGASLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 60
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 61 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 90
>gi|47215645|emb|CAG01362.1| unnamed protein product [Tetraodon nigroviridis]
Length = 264
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 174 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 233
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 234 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 264
>gi|149030744|gb|EDL85781.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_a [Rattus norvegicus]
gi|149030746|gb|EDL85783.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 270
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 180 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 239
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 240 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 270
>gi|148664596|gb|EDK97012.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_c [Mus
musculus]
Length = 510
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 420 EGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 479
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 480 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 510
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 62 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 121
>gi|148706788|gb|EDL38735.1| trinucleotide repeat containing 4, isoform CRA_a [Mus musculus]
Length = 287
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 197 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 256
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 257 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 287
>gi|269868322|gb|ACZ52465.1| Bruno-3 transcript variant 33 [Drosophila persimilis]
Length = 137
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 43 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 102
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 103 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 137
>gi|269868146|gb|ACZ52379.1| Bruno-3 transcript variant 6 [Drosophila pseudoobscura]
Length = 395
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 301 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 360
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 361 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 395
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 100
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L V+YAD E ER
Sbjct: 101 KFGTQQEAQSAIANLHGSQTMPGASSSLVVRYADTEKER 139
>gi|320545831|ref|NP_001189094.1| bruno-3, isoform G [Drosophila melanogaster]
gi|318069195|gb|ADV37530.1| bruno-3, isoform G [Drosophila melanogaster]
Length = 390
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 296 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 355
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 356 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 390
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 148
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 149 SPYGAYAQL 157
>gi|269868202|gb|ACZ52407.1| Bruno-3 transcript variant 21 [Drosophila pseudoobscura]
Length = 353
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT +SKCFGFVS+++
Sbjct: 259 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNLSKCFGFVSFDN 318
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G ++LKVQLKR ++PY
Sbjct: 319 PASAQAAIQAMNGFQIGMERLKVQLKRPKDASRPY 353
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 46 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 97
>gi|320545841|ref|NP_001189099.1| bruno-3, isoform L [Drosophila melanogaster]
gi|318069200|gb|ADV37535.1| bruno-3, isoform L [Drosophila melanogaster]
Length = 345
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 251 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 310
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 311 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 345
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF 106
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER ++
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQ 86
Query: 107 IGMLPKNVSEAEVSALFSIYGTIKDL 132
N+ V FS YG L
Sbjct: 87 QMAGHMNLLNPFVFNQFSPYGAYAQL 112
>gi|443723647|gb|ELU11974.1| hypothetical protein CAPTEDRAFT_144233 [Capitella teleta]
Length = 461
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP GANLFIYH+PQEF DQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 372 GPDGANLFIYHLPQEFADQDLMQMFLPFGTVISAKVFIDKQTNLSKCFGFVSYDNPMSAQ 431
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 432 AAIQAMNGFQIGMKRLKVQLKRPKSDSKPY 461
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G+G P +F+ IP+ + +L F+ FG V V DK TG SK FV++
Sbjct: 5 GTGKTEPDPDAIKMFVGQIPRSMDESDLRKMFEEFGPVFQLNVLRDKVTGQSKGCCFVTF 64
Query: 399 ESPASAQNA 407
+ SA A
Sbjct: 65 YTRKSALEA 73
>gi|320545829|ref|NP_001189093.1| bruno-3, isoform F [Drosophila melanogaster]
gi|318069194|gb|ADV37529.1| bruno-3, isoform F [Drosophila melanogaster]
Length = 337
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 243 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 302
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 303 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 337
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868320|gb|ACZ52464.1| Bruno-3 transcript variant 28 [Drosophila persimilis]
Length = 336
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER ++
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQTRRM 85
>gi|307192008|gb|EFN75398.1| CUG-BP- and ETR-3-like factor 4 [Harpegnathos saltator]
Length = 278
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 76/106 (71%)
Query: 330 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 389
P T+ + G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT
Sbjct: 173 PMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFIDRATNQ 232
Query: 390 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 233 SKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 278
>gi|320545823|ref|NP_001189090.1| bruno-3, isoform C [Drosophila melanogaster]
gi|318069191|gb|ADV37526.1| bruno-3, isoform C [Drosophila melanogaster]
Length = 396
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 302 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 361
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 362 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 396
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|269868172|gb|ACZ52392.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
gi|269868176|gb|ACZ52394.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|320545835|ref|NP_001189096.1| bruno-3, isoform I [Drosophila melanogaster]
gi|318069197|gb|ADV37532.1| bruno-3, isoform I [Drosophila melanogaster]
Length = 384
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 290 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 349
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 350 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 384
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 70/104 (67%)
Query: 99 ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALA 158
E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +
Sbjct: 31 EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQS 90
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 91 AITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 134
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 24 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 82
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 83 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 142
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 143 SPYGAYAQL 151
>gi|269868307|gb|ACZ52458.1| Bruno-3 transcript variant 9 [Drosophila persimilis]
Length = 381
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868182|gb|ACZ52397.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|320545825|ref|NP_001189091.1| bruno-3, isoform D [Drosophila melanogaster]
gi|318069192|gb|ADV37527.1| bruno-3, isoform D [Drosophila melanogaster]
Length = 382
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 288 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 347
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 348 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 382
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868184|gb|ACZ52398.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNPSKCFGFVSFDN 346
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|313228868|emb|CBY18019.1| unnamed protein product [Oikopleura dioica]
Length = 398
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 85/140 (60%), Gaps = 12/140 (8%)
Query: 297 GLQYPM-PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIY 355
G Q+ M P P G PL S G S A N NP Q EGP G NLFIY
Sbjct: 270 GYQFVMVPNPAGGYTQVPL--SCGGPSMAALNQNPCAP---------QREGPDGCNLFIY 318
Query: 356 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 415
H+PQEF D +L N F FG V+SAKVF+D+AT SKCFGFVSY++ SA NAI MNG Q
Sbjct: 319 HLPQEFTDADLANIFAPFGAVISAKVFIDRATNQSKCFGFVSYDNAPSAANAITSMNGFQ 378
Query: 416 LGGKKLKVQLKRDNKQNKPY 435
+G K+LKVQLKR +K +
Sbjct: 379 IGMKRLKVQLKRPKAGDKNF 398
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF YG I++ ILR + +SKGCAF+K + A A+
Sbjct: 44 DRKLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEGSSKGCAFIKLANVQHAQNAIA 103
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
++G M G+S +VVK AD EKER R+ Q+
Sbjct: 104 QMHGSTTMPGASSSIVVKLADNEKERALRKMQQ 136
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F ++ ++E I++ +S+GC F+ + Q A A+
Sbjct: 46 KLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEG-SSKGCAFIKLANVQHAQNAIAQ 104
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H T+PGASS + VK AD E ER K+
Sbjct: 105 MHGSTTMPGASSSIVVKLADNEKERALRKM 134
>gi|10185822|gb|AAG14457.1|AF284423_1 RNA-binding protein BRUNOL1 [Homo sapiens]
Length = 140
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 50 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 109
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 110 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 140
>gi|432116895|gb|ELK37482.1| CUGBP Elav-like family member 5 [Myotis davidii]
Length = 426
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 69/91 (75%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 336 EGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASA 395
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR PY
Sbjct: 396 QTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 426
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 55/216 (25%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +G
Sbjct: 5 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKG--------------- 49
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ KLF+GML K SE +V LF +G I +
Sbjct: 50 -----------------------------DRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 80
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 81 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 140
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
Q+ Q L PSL LP PY+ Y
Sbjct: 141 QQMVGQLGIL------TPSL--TLPFS---PYSAYA 165
>gi|351714404|gb|EHB17323.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 195
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCC V +R+ A +A
Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAALEA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q+K AD E + KLFIGM+ + +E ++ +FS +G I+
Sbjct: 76 QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIE 135
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 173
+ +ILRG S+GCAF+ + T+ A A++A++ ME S
Sbjct: 136 EYRILRGPDGLSRGCAFVTFTTRGMAQTAIKAMHQAQTMEVGS 178
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC + + T++ AL A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAALEAQ 76
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEK 101
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + + TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIEEYRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLE 102
V +R A A+ A H +T+ S+ QVK GE+ LE
Sbjct: 153 VTFTTRGMAQTAIKAMHQAQTMEVGSA--QVK---GEITYLE 189
>gi|66362598|ref|XP_628265.1| bruno-like protein with 2 RRM domains [Cryptosporidium parvum Iowa
II]
gi|46229739|gb|EAK90557.1| bruno-like protein with 2 RRM domains [Cryptosporidium parvum Iowa
II]
Length = 690
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 13/189 (6%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+K+ K VKLFV +VPKHMT +LL +F ++ LV E NII+D + +GC FV
Sbjct: 257 NKRRSKRGYAPVKLFVNRVPKHMTNEELLKIFNKYGLVVECNIIRD--SNGPKGCAFVRF 314
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPK 112
+ EA A+ H K L P+QVKYADGE+ERL K+F+G LPK
Sbjct: 315 SNIYEAQNAILCIHGKTVLDKEVGPIQVKYADGEIERLGLSPDVQPCGESVKVFVGSLPK 374
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
N +E ++ LF +G + ++ I+R + + SK AF+ + K A A+ ++ K+ + S
Sbjct: 375 NCTEDQLLLLFKQFGHVDEVHIIRDNNKQSKCSAFVTFPRKFMAENAIMFLDKKYIFDNS 434
Query: 173 SVPLVVKWA 181
P+ V+ A
Sbjct: 435 KRPIEVRLA 443
>gi|74149188|dbj|BAE22391.1| unnamed protein product [Mus musculus]
Length = 88
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 69/87 (79%)
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI
Sbjct: 2 GANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI 61
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR +KPY
Sbjct: 62 QSMNGFQIGMKRLKVQLKRSKNDSKPY 88
>gi|391330723|ref|XP_003739804.1| PREDICTED: CUGBP Elav-like family member 3-like [Metaseiulus
occidentalis]
Length = 484
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 72/93 (77%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL + F FG V+SAKVF+D+AT SKCFGFVS+++
Sbjct: 392 QREGPEGCNLFIYHLPQEFGDAELTHMFLPFGNVISAKVFIDRATNQSKCFGFVSFDNQN 451
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ+AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 452 SAQSAIQAMNGFQIGMKRLKVQLKRPKDASRPY 484
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 64/92 (69%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAA 159
R E KLF+GML K +E ++ LF +G+I++ ILRG SKGCAF+K+ T +A+ A
Sbjct: 4 RQERKLFVGMLGKQQNEEDIRDLFQGFGSIEECTILRGPDGHSKGCAFVKFSTHNEAMNA 63
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ A++G M G+S +VVK+ADTE+ERQ RR
Sbjct: 64 IAALHGSQTMPGASSTIVVKFADTERERQMRR 95
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ER KLFVG + K E + +F+ F ++E I++ S+GC FV + EA
Sbjct: 5 QER-KLFVGMLGKQQNEEDIRDLFQGFGSIEECTILRGPDGH-SKGCAFVKFSTHNEAMN 62
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ A H +T+PGASS + VK+AD E ER ++
Sbjct: 63 AIAALHGSQTMPGASSTIVVKFADTERERQMRRM 96
>gi|351711625|gb|EHB14544.1| CUG-BP- and ETR-3-like factor 4 [Heterocephalus glaber]
Length = 702
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG VS+++PASA
Sbjct: 581 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATSQSKCFGLVSFDTPASA 640
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 434
Q AI MNG Q+G K+LKVQLKR N+P
Sbjct: 641 QTAIQAMNGFQIGMKRLKVQLKRPKDANRP 670
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 318 PGSVSPA---VANSNPSTSSSGGT-GSGGQIEG---PPG------------ANLFIYHIP 358
P V PA N++ ST+ GG+ GS G + G PG LFI IP
Sbjct: 168 PSPVFPANGQADNASLSTNGLGGSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIP 227
Query: 359 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 228 RNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 280
>gi|269868170|gb|ACZ52391.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ I MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQATIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|380799133|gb|AFE71442.1| CUGBP Elav-like family member 3 isoform 2, partial [Macaca mulatta]
Length = 102
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 12 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 71
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 72 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 102
>gi|118485698|gb|ABK94699.1| unknown [Populus trichocarpa]
Length = 247
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 10/164 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL++ +P+ TE + ++F+E V EV + +DK T + CFV + +EAD+A+ A
Sbjct: 81 KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRA 140
Query: 76 CHNKKTLPGASSPLQVKYADGELER----------LEHKLFIGMLPKNVSEAEVSALFSI 125
HN+ T+PG +P +V+YADGE ER KL++G + K S+ E+ +FS
Sbjct: 141 LHNQHTIPGEVAPFKVRYADGERERPVARCSMVGGFVDKLYVGSINKLASKQEIEEIFSP 200
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
YG ++D+ I R + S+GCAF+K+ ++ ALAA++ +NG M
Sbjct: 201 YGHVEDVYIARDELKQSRGCAFVKFAHRDMALAAIKGLNGTLTM 244
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KL+I +P+ +E + +LF +G++ ++ + R + + F+KY T E+A A+ A
Sbjct: 81 KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRA 140
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
++ +H + G P V++AD E+ER
Sbjct: 141 LHNQHTIPGEVAPFKVRYADGERER 165
>gi|355701918|gb|EHH29271.1| CUGBP Elav-like family member 4, partial [Macaca mulatta]
Length = 409
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 38/198 (19%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK-------------- 95
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
+ P+QVK AD E + KLF+GML K SE +V
Sbjct: 96 --------------MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 141
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 142 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 201
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 202 ADTDKERTMRRMQQMAGQ 219
>gi|332255740|ref|XP_003276989.1| PREDICTED: CUGBP Elav-like family member 5 [Nomascus leucogenys]
Length = 438
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 69/91 (75%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 348 EGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASA 407
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR PY
Sbjct: 408 QAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 438
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 48 KDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGAS----SPLQVKYADGELERLEH 103
+D + +GC F+ +R A KA A H +KTLPG S P+QVK AD E +
Sbjct: 39 EDSSRSGGKGCAFLTYCARDSAIKAQTALHEQKTLPGVSPVWARPIQVKPADSESRGGDR 98
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A+
Sbjct: 99 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 158
Query: 164 NGKHKM 169
+G M
Sbjct: 159 HGSQTM 164
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 99 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 157
Query: 76 CHNKKTLP 83
H +T+P
Sbjct: 158 LHGSQTMP 165
>gi|442761475|gb|JAA72896.1| Putative rna-binding protein etr-3 rrm superfamily, partial [Ixodes
ricinus]
Length = 129
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 68/90 (75%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 40 GPEGANLFIYHLPQEFTDSDLAQTFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNSLSAQ 99
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 100 AAIQAMNGFQIGTKRLKVQLKRSKDASKPY 129
>gi|338726567|ref|XP_001916316.2| PREDICTED: CUGBP Elav-like family member 5-like [Equus caballus]
Length = 505
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 95/158 (60%), Gaps = 25/158 (15%)
Query: 294 AVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSGG 337
AVPGL P+ P+PGG H L + G V SP VA + +P+ S
Sbjct: 357 AVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLHPAFSGVQ- 412
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
Q GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS
Sbjct: 413 -----QYTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVS 467
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 468 FDNPASAQTAIQAMNGFQVGMKRLKVQLKRPKDPGHPY 505
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 113
GC F+ +R A KA A H +KTLPG + P+QVK AD E L + PK+
Sbjct: 79 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGSCHLSVATGPKD 135
>gi|390338613|ref|XP_003724811.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Strongylocentrotus purpuratus]
Length = 469
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 69/93 (74%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG+V+S+KVFVD+ T SKCFGFVS+++P
Sbjct: 377 QREGPEGCNLFIYHLPQEFGDAELTQMFVPFGQVISSKVFVDRVTNQSKCFGFVSFDNPQ 436
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AQ AI MNG Q+G K+LKVQ KR NKPY
Sbjct: 437 CAQAAIQAMNGFQIGMKRLKVQHKRPKDANKPY 469
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 48/183 (26%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLFVGQ+P+++ E L +F++F + E+ +++D+ T +GC F+ R+ A +
Sbjct: 45 HDAIKLFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIR 104
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A A H +KTLPG + LQVK AD E
Sbjct: 105 AQKALHEQKTLPGMTRALQVKPADSE---------------------------------- 130
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
RG GCAF+K+ T+++A+ A+ +IN ++ LVVK+ADTEKERQ RR
Sbjct: 131 ---SRG------GCAFVKFSTRKEAVGAINSIN-----MSANPNLVVKFADTEKERQLRR 176
Query: 192 AQK 194
Q+
Sbjct: 177 MQQ 179
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 408
LF+ IP+ +++L F+ FGR+ V D+ TGV K F++Y ES AQ A+
Sbjct: 50 LFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIRAQKAL 109
>gi|290985168|ref|XP_002675298.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
gi|284088893|gb|EFC42554.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
Length = 641
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 192/448 (42%), Gaps = 59/448 (13%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR-ASRGCCFVICPSRQEADKAVNA 75
+FV +P H ++ L +F F + +++ DKT +S G FV + EA A+
Sbjct: 124 VFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKTRENSSLGFGFVRFSNENEAQDAIQG 183
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEH-KLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
N+K++ ++ + G E+ + LFI +P + E + F ++G I ++I
Sbjct: 184 L-NEKSIGNKRLLCKLSNSAGNKEKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKI 242
Query: 135 LRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS---VPLVVKWADTEKERQAR 190
+ + Q SK F K+E ++ AL+A++ +NG + SS +PLVV++A+TE E+Q R
Sbjct: 243 MIDINTQRSKCYGFCKFENRKDALSAIQKMNGSKLDDDSSKDILPLVVRFAETEHEKQKR 302
Query: 191 RAQKAQ--SQANNLPN--ADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
+ + Q ++PN S H + P G P Y + M R Q
Sbjct: 303 KLKTRQIIRPPTHVPNPYVHSHHTGF--SNPNGMNPSLYSYPM-----FNQMAMRRDDQQ 355
Query: 247 NQPG----FHGIIP-------------PVNQGNAMRGASPDLS----------SNMGPRN 279
++ +H +P PV+ R + L +N GP
Sbjct: 356 DETSQDMTYHSDVPYHMTYFVPHHMGVPVSSHPTDRFSKDKLENEKSNESDDQNNQGPFL 415
Query: 280 YAMPP--SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG 337
+ P + + P P PM M N + + N S+S
Sbjct: 416 HNFNPYYNPYFNPYTPYNPYYHVPMYDESSM-------NENQEQTHTKRSKNESSSPEDK 468
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
G+ ANLFI+H+P + D +L F FG + S KV D T +SK +GFV
Sbjct: 469 NSKSGET-----ANLFIFHLPGDVDDSKLMELFSKFGEIESVKVIRDPKTNLSKGYGFVK 523
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQL 425
Y + SA A++ MN ++G K LKV
Sbjct: 524 YCNIDSAMEAVSKMNSYKIGKKHLKVSF 551
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC-FGFVSYESPASAQNAI 408
N+F+ ++P F D++L F FG ++S V DK S FGFV + + AQ+AI
Sbjct: 122 CNVFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKTRENSSLGFGFVRFSNENEAQDAI 181
Query: 409 AMMNGCQLGGKKLKVQL 425
+N +G K+L +L
Sbjct: 182 QGLNEKSIGNKRLLCKL 198
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K +++ LF+ +P H E L F+ F + +V I+ D T+ S+ F +R++
Sbjct: 205 KEKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKIMIDINTQRSKCYGFCKFENRKD 264
Query: 69 ADKAVNACHNKKTLPGASS---PLQVKYADGELERLEHKL 105
A A+ + K +S PL V++A+ E E+ + KL
Sbjct: 265 ALSAIQKMNGSKLDDDSSKDILPLVVRFAETEHEKQKRKL 304
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
E LF+ +P + +++L+ +F +F ++ V +I+D T S+G FV
Sbjct: 474 ETANLFIFHLPGDVDDSKLMELFSKFGEIESVKVIRDPKTNLSKGYGFV 522
>gi|328722645|ref|XP_003247623.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Acyrthosiphon pisum]
Length = 437
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 72/96 (75%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
S Q+EGP GANLFIYH+PQ+F D +L F FG V+SAKV++DK T +SKCFGFVSY+
Sbjct: 342 SSKQLEGPEGANLFIYHLPQDFADSDLVTMFLPFGNVISAKVYIDKETKLSKCFGFVSYD 401
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+ SAQ AI MN Q+G K+LKVQLKR + ++PY
Sbjct: 402 NAYSAQAAIQTMNSYQVGNKRLKVQLKRPKEASRPY 437
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLFIGML K +SE ++ +F +G I++ +LR SKGCAF+ Y TK+ A+AA++
Sbjct: 7 ERKLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNGVSKGCAFVTYTTKQNAIAAIK 66
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
++ MEG + PLVVK+ADT+KE+ +R Q+ Q+
Sbjct: 67 GMHHSQTMEGCTCPLVVKFADTQKEKDQKRMQQMQA 102
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+S ER KLF+G + K ++E + MF+ F ++E ++++D S+GC FV ++Q A
Sbjct: 4 ASPER-KLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPN-GVSKGCAFVTYTTKQNA 61
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ H+ +T+ G + PL VK+AD + E+ + ++
Sbjct: 62 IAAIKGMHHSQTMEGCTCPLVVKFADTQKEKDQKRM 97
>gi|241626818|ref|XP_002409727.1| RNA binding protein NAPOR-3, putative [Ixodes scapularis]
gi|215503224|gb|EEC12718.1| RNA binding protein NAPOR-3, putative [Ixodes scapularis]
Length = 139
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 69/93 (74%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q + P GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 47 QYQCPEGANLFIYHLPQEFTDSDLAQTFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNSL 106
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 107 SAQAAIQAMNGFQIGTKRLKVQLKRSKDASKPY 139
>gi|341865543|tpg|DAA34911.1| TPA_exp: RRM domain-containing RNA-binding protein Bruno
[Pleurobrachia pileus]
Length = 384
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQVPK+ E+ L F+++ + + + +D+ ++A +GC FV + A+ A++
Sbjct: 18 LKLFVGQVPKNFEESDLKPYFEKYGPLVNIKVCRDRDSKAHKGCAFVTFTNLDNAENAMH 77
Query: 75 ACHNKKTLPGASSPLQVKYA-DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
H++ LPGA +Q+K D + ++ + +LF+GM+ K+++ E+ A+F +G + D
Sbjct: 78 EMHDRIALPGAKKEMQIKAVHDDDNKKFDKRLFVGMISKSLNGDELKAMFEQFGEVVDCN 137
Query: 134 ILR---GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
IL ++ S+GC F+K+ L A++ ++ MEG + PLVVK AD+ ++ R
Sbjct: 138 ILTSMINGEKMSRGCGFVKFAKASSCLQAIKEMHQSQTMEGCNSPLVVKHADSPADKMKR 197
Query: 191 RA----QKAQSQANNL 202
A ++ S+ NN
Sbjct: 198 NASGFEEREDSKRNNF 213
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 410
LF+ +P+ F + +L F+ +G +++ KV D+ + K FV++ + +A+NA+ M
Sbjct: 20 LFVGQVPKNFEESDLKPYFEKYGPLVNIKVCRDRDSKAHKGCAFVTFTNLDNAENAMHEM 79
Query: 411 MNGCQLGGKKLKVQLK----RDNKQ 431
+ L G K ++Q+K DNK+
Sbjct: 80 HDRIALPGAKKEMQIKAVHDDDNKK 104
>gi|269868168|gb|ACZ52390.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQE GD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQELGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868166|gb|ACZ52389.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KV +D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVLIDRATNQSKCFGFVSFDN 301
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868174|gb|ACZ52393.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQE GD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQELGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|432114336|gb|ELK36264.1| CUGBP Elav-like family member 3 [Myotis davidii]
Length = 435
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 346 GPDGCNIFIYHLPQEFTDSEILQMFIPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 405
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 406 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 435
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+A H +KTLPG + P+QVK AD E
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE 89
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 96 GELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQ 155
G LE + KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +
Sbjct: 169 GPLE--DRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAE 226
Query: 156 ALAALEAINGKHKM 169
A AA+ ++ +
Sbjct: 227 AQAAINTLHSSRTL 240
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ + + G + P+ VK AD+E
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSE 89
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEAD 70
E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 172 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQ 228
Query: 71 KAVNACHNKKTLP 83
A+N H+ +TLP
Sbjct: 229 AAINTLHSSRTLP 241
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|256078401|ref|XP_002575484.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350645920|emb|CCD59385.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 479
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++P SAQ
Sbjct: 390 PEGCNLFIYHLPQEFGDPELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNPTSAQT 449
Query: 407 AIAMMNGCQLGGKKLKVQLKR-DNKQNKPY 435
AI MNG Q+G K+LKVQLKR N KPY
Sbjct: 450 AIHAMNGFQIGMKRLKVQLKRPKNDSTKPY 479
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 72/107 (67%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
PLQVK AD E E KLF+GML K +E +V LF +GTI++ ILR SKGCAF
Sbjct: 4 PLQVKTADMERRTEERKLFVGMLSKQQNEEDVRLLFEPFGTIEECTILRDQNGNSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K+ T+++A +A+ ++G M G+S +VVK+AD+EKER R+ Q+
Sbjct: 64 VKFSTQQEAQSAILTLHGSQTMPGASSSIVVKFADSEKERHTRKIQQ 110
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
++ ++ +EER KLFVG + K E + +F+ F ++E I++D+ S+GC FV
Sbjct: 7 VKTADMERRTEER-KLFVGMLSKQQNEEDVRLLFEPFGTIEECTILRDQNGN-SKGCAFV 64
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
++QEA A+ H +T+PGASS + VK+AD E ER K+
Sbjct: 65 KFSTQQEAQSAILTLHGSQTMPGASSSIVVKFADSEKERHTRKI 108
>gi|339252334|ref|XP_003371390.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316968369|gb|EFV52650.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 427
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 69/93 (74%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVS+++
Sbjct: 335 QKEGPDGCNLFIYHLPQEFGDAELMQMFMPFGPVISAKVFIDRATNQSKCFGFVSFDNAV 394
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR KPY
Sbjct: 395 SAQAAIHAMNGFQIGMKRLKVQLKRPKDVGKPY 427
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 7/118 (5%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K +E ++ L +G +++ +LRG TSKGCAF
Sbjct: 4 PMQVKPADSESRGEDRKLFVGMLSKQQTEDDLRHLMEPHGHVEECTVLRGPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKM-------EGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K+ +A AA+ A++G M +G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 64 VKFSCHLEAQAAIAALHGSQTMPVSWFECKGASSSLVVKFADTEKERQLRRMQQMAAQ 121
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K TE L + + V+E +++ D T S+GC FV
Sbjct: 11 DSESRGEDRKLFVGMLSKQQTEDDLRHLMEPHGHVEECTVLRGPDGT---SKGCAFVKFS 67
Query: 65 SRQEADKAVNACHNKKTLP-------GASSPLQVKYADGELER 100
EA A+ A H +T+P GASS L VK+AD E ER
Sbjct: 68 CHLEAQAAIAALHGSQTMPVSWFECKGASSSLVVKFADTEKER 110
>gi|47200683|emb|CAF87626.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP G N+FIYH+PQEF D EL F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 81 GPEGCNIFIYHLPQEFSDSELLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQ 140
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 141 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 170
>gi|269868180|gb|ACZ52396.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT S CFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSICFGFVSFDN 346
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|358333422|dbj|GAA51938.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 849
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
+ GP G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++ S
Sbjct: 709 LTGPEGCNLFIYHLPQEFGDNELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNQTS 768
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKR 427
AQNAI MNG Q+G K+LKVQLKR
Sbjct: 769 AQNAIQAMNGFQIGLKRLKVQLKR 792
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALF 123
R A + H+++ P S +D L + KLF+GML K +E E+ LF
Sbjct: 75 RHSAPASTTKSHSRQLTPNGS------RSDSALGFTIEDRKLFVGMLGKQQTEDELRTLF 128
Query: 124 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
+ YG+I++ +LR SKGCAF+K+ + +AL+A+E ++ M+G+S PLVVK+ADT
Sbjct: 129 APYGSIEECTVLRDQNGASKGCAFVKFTSNSEALSAIEGLHNSQTMQGASSPLVVKFADT 188
Query: 184 EKE 186
++E
Sbjct: 189 DRE 191
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E+R KLFVG + K TE +L +F + ++E +++D+ AS+GC FV S EA
Sbjct: 106 EDR-KLFVGMLGKQQTEDELRTLFAPYGSIEECTVLRDQN-GASKGCAFVKFTSNSEALS 163
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE 99
A+ HN +T+ GASSPL VK+AD + E
Sbjct: 164 AIEGLHNSQTMQGASSPLVVKFADTDRE 191
>gi|351705590|gb|EHB08509.1| CUG-BP- and ETR-3-like factor 5 [Heterocephalus glaber]
Length = 106
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 71/100 (71%)
Query: 336 GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 395
GG G GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGF
Sbjct: 7 GGIGGRVVFRGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGF 66
Query: 396 VSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
VS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 67 VSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDLGHPY 106
>gi|313227641|emb|CBY22788.1| unnamed protein product [Oikopleura dioica]
Length = 401
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 34 MFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93
MFKEF V ++ I++D+ T SRGCCFV + AD A A + + LPG +P+Q++
Sbjct: 1 MFKEFGEVFDLQILRDRITGHSRGCCFVTFFETKSADDAQRALNGIRVLPGMLNPVQMRA 60
Query: 94 ADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETK 153
AD E +R + +LFIGMLP E + +F YG I++LQ+LR TS+ CAFL + ++
Sbjct: 61 ADSE-KRSDRRLFIGMLPITCDEEMLKKMFEQYGKIQELQVLRKFNGTSRRCAFLTFSSR 119
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK-AQSQANNLPNADSQHPSL 212
+A +A++A+N + +VV+ ADT K+++ R+ ++ +S A L + L
Sbjct: 120 LEAQSAVQALNNTVVSSICAQGMVVRLADTPKQKEKRKLERQLKSCAMQLQRLCTDEDDL 179
Query: 213 FGALPM 218
G L +
Sbjct: 180 VGKLLL 185
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%)
Query: 326 ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 385
A+ + + SS+ GG GP GANLF+YH+P+ F D +L F G ++SAKV+VD+
Sbjct: 245 ASDDSTKSSTENQTIGGTQAGPEGANLFVYHLPKRFNDSDLYALFSTIGELMSAKVYVDR 304
Query: 386 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
T SKCFGFVSY+ A AI N Q+ K+LKV++K+
Sbjct: 305 HTQESKCFGFVSYKHIIDASAAIKRFNTYQVDDKRLKVEMKK 346
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK+S +LF+G +P E L MF+++ + E+ +++ K SR C F
Sbjct: 58 MRAADSEKRSDR---RLFIGMLPITCDEEMLKKMFEQYGKIQELQVLR-KFNGTSRRCAF 113
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADG----ELERLEHKL 105
+ SR EA AV A +N + + V+ AD E +LE +L
Sbjct: 114 LTFSSRLEAQSAVQALNNTVVSSICAQGMVVRLADTPKQKEKRKLERQL 162
>gi|269868148|gb|ACZ52380.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KV +D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVSIDRATNQSKCFGFVSFDN 346
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|281500590|pdb|2KHC|A Chain A, Bruno Rrm3+
Length = 118
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 69/87 (79%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 32 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 91
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKR 427
P SAQ AI MNG Q+G K+LKVQLK+
Sbjct: 92 PDSAQVAIKAMNGFQVGTKRLKVQLKK 118
>gi|358340719|dbj|GAA48557.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 675
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
+ GP G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++P S
Sbjct: 583 LTGPEGCNLFIYHLPQEFGDPELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNPTS 642
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKR-DNKQNKPY 435
A AI MNG Q+G K+LKVQLKR + KPY
Sbjct: 643 AHAAIQAMNGFQIGMKRLKVQLKRPKSDATKPY 675
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 64/93 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K E +V LF +GTI++ ILR SKGCAF+K+ ++++A +A+
Sbjct: 170 ERKLFVGMLSKQQGEEDVRRLFEPFGTIEECTILRDQSGNSKGCAFVKFSSQQEAQSAIL 229
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
A++G M G+S +VVK+AD+EKER R+ Q+
Sbjct: 230 ALHGSQTMPGASSSIVVKFADSEKERHTRKIQQ 262
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A +++EER KLFVG + K E + +F+ F ++E I++D++ S+GC FV
Sbjct: 159 ASQSNSAQNNEER-KLFVGMLSKQQGEEDVRRLFEPFGTIEECTILRDQSGN-SKGCAFV 216
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S+QEA A+ A H +T+PGASS + VK+AD E ER K+
Sbjct: 217 KFSSQQEAQSAILALHGSQTMPGASSSIVVKFADSEKERHTRKI 260
>gi|312076960|ref|XP_003141093.1| LYST-interacting protein LIP9 [Loa loa]
Length = 473
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
+ GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVSY++ AS
Sbjct: 384 VLGPEGCNLFIYHLPQEFGDTELMQMFMPFGHVISAKVFIDRATNQSKCFGFVSYDNTAS 443
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
A AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 444 AMAAIQAMNGFQIGMKRLKVQLKR--PRDKPY 473
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Query: 89 LQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS 142
+QVK AD E E KLF+GML K +E +V ALF+ +G I ++ +LRG+ S
Sbjct: 5 MQVKPADNESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPFGVIDEVTVLRGADGLS 64
Query: 143 KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
KGCAF+K+ T QA A+ A++G M G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 65 KGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAAQ 120
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
ES+ + + E KLFVG + K E + A+F F ++DEV +++ S+GC FV
Sbjct: 13 ESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPFGVIDEVTVLRG-ADGLSKGCAFVK 71
Query: 63 CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ +A A+NA H +T+PGASS L VK+AD E ER
Sbjct: 72 FATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 109
>gi|294464552|gb|ADE77786.1| unknown [Picea sitchensis]
Length = 101
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
Query: 302 MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF 361
M Y G M+G L GSV PA+ N+N S + + T SG Q+EGPPGANLFIYHIPQEF
Sbjct: 1 MGYQGAMMGPAALPVGHGSVGPAMVNAN-SAAGNVKTSSGAQVEGPPGANLFIYHIPQEF 59
Query: 362 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
GDQEL NAF +FG+V+SAKVFVDKATGVSKCFG
Sbjct: 60 GDQELSNAFSSFGKVISAKVFVDKATGVSKCFG 92
>gi|340369729|ref|XP_003383400.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Amphimedon
queenslandica]
Length = 447
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 69/93 (74%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGP G NLFIYH+P + D +L N F FG+V+SAKVF+DK T +SKCFGFVS+E+
Sbjct: 354 QREGPEGGNLFIYHLPNDIKDSDLANMFSQFGKVISAKVFLDKHTNLSKCFGFVSFETSQ 413
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+ Q AI MNG Q+G K+LKVQLKR + NKPY
Sbjct: 414 AGQAAIQAMNGFQIGTKRLKVQLKRPKEANKPY 446
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ + E+R +LFVGQ+ M++ Q+ +F F LV++V+I++DK S+ FV
Sbjct: 96 TQSNRDKGEDR-RLFVGQLSPEMSDEQVANLFSPFGLVEDVSILRDKDG-VSKKAAFVRM 153
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE----RLEHKLFIGMLP 111
SR EA A+ H TLPG S P+ VK AD E E R H++ + P
Sbjct: 154 GSRNEAMTAIQGLHQSCTLPGVSHPVNVKIADTEREKEMKRFHHQVQVNQPP 205
>gi|67611128|ref|XP_667137.1| RNA binding protein [Cryptosporidium hominis TU502]
gi|54658240|gb|EAL36907.1| RNA binding protein [Cryptosporidium hominis]
Length = 903
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 13/195 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+++ E L +FK + V V++I++K+T RG V S +AD A+
Sbjct: 305 IKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALR 364
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ K L PL+V+Y+ GE ERL + KLF+G LP+N++E E+ L
Sbjct: 365 ELNSIKVLDELRGPLKVQYSTGEPERLGFESESCIPGVDQVKLFVGALPRNITEDEIREL 424
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YG I ++ I+R KGCAF+KY KEQ L A+++++G + + P+ V++A
Sbjct: 425 FSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALTLADVNRPIEVRFA 484
Query: 182 DTEKERQARRAQKAQ 196
+ + AQ
Sbjct: 485 SKNHQSSTSSSLIAQ 499
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
++ GPPGAN+FI+++P E+ + L F FG +LSA + VDK +G +K FVSY++
Sbjct: 727 EVVGPPGANIFIFNVPYEWDKKSLVGLFCRFGNILSAHLMVDKTSGRNKGVAFVSYDNIH 786
Query: 403 SAQNAIAMMNG-CQLGGKKLKVQLKR 427
SA A+ MNG G+KLKV +K+
Sbjct: 787 SAAEAVNHMNGFITEQGRKLKVSIKQ 812
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLFVG +P+++TE ++ +F + ++E+ I+++ + +GC FV +++ A
Sbjct: 403 DQVKLFVGALPRNITEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFA 462
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + H TL + P++V++A
Sbjct: 463 IKSLHGALTLADVNRPIEVRFA 484
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAA 159
+E KLF+G +P+N+ E ++ LF +YG + ++ ++R S +G A + E+ QA A
Sbjct: 303 VEIKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFA 362
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
L +N ++ PL V+++ E ER ++ +P D Q GALP
Sbjct: 363 LRELNSIKVLDELRGPLKVQYSTGEPERLGFESESC------IPGVD-QVKLFVGALP 413
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LF+ +P+ + +L + F+ +GRV++ V +K+TG+ + V+ ES A A A+ +
Sbjct: 307 LFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALREL 366
Query: 412 NGCQL 416
N ++
Sbjct: 367 NSIKV 371
>gi|269868309|gb|ACZ52459.1| Bruno-3 transcript variant 16 [Drosophila persimilis]
Length = 367
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 70/95 (73%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEF D EL F FG V+ +KVF+D+AT SKCFGFVS+++
Sbjct: 273 GCSISGPEGCNLFIYHLPQEFCDAELMQMFLPFGNVIGSKVFIDRATNQSKCFGFVSFDN 332
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 333 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 367
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER ++
Sbjct: 60 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTVPGASSSLVVKYADTEKERQIRRMQQM 119
Query: 109 MLPKNVSEAEVSALFSIYG 127
N+ V FS YG
Sbjct: 120 AGHMNLLNPSVFNQFSPYG 138
>gi|391325662|ref|XP_003737349.1| PREDICTED: uncharacterized protein LOC100908759 [Metaseiulus
occidentalis]
Length = 373
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 67/87 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G QIEGP G+NLFIYH+PQ+FGD ++ F FG V+SAKVF+DK T +SKCFGFVSY +
Sbjct: 275 GKQIEGPEGSNLFIYHLPQDFGDNDMVQLFMPFGEVISAKVFIDKHTQLSKCFGFVSYSN 334
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQLKR 427
AQ AI +NG Q+G K+LKVQLKR
Sbjct: 335 AIHAQAAIKALNGFQIGTKRLKVQLKR 361
>gi|269868247|gb|ACZ52428.1| Bruno-3 transcript variant 17 [Drosophila melanogaster]
Length = 335
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 82/134 (61%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 212 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 261
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT +SKCFGFVS+++PASAQ AI
Sbjct: 262 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNLSKCFGFVSFDNPASAQAAIQA 321
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 322 MNGFQIGMKRLKVQ 335
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G + G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTIPGASSSLVVKYADTEKERQI 65
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTIPGASSSLVVKYADTEKER 63
>gi|426253953|ref|XP_004020653.1| PREDICTED: CUGBP Elav-like family member 4 [Ovis aries]
Length = 513
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 67/87 (77%)
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
G NLFIYH+PQE GD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASAQ AI
Sbjct: 427 GCNLFIYHLPQELGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAI 486
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR N+PY
Sbjct: 487 QAMNGFQIGMKRLKVQLKRPKDANRPY 513
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 92/188 (48%), Gaps = 33/188 (17%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +G F S A
Sbjct: 46 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGFAFKTNCSTDSAF 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
K A H K LPG + P+QVK AD E S S L
Sbjct: 106 KVGRAVHKMKELPGMNRPIQVKPADSE-----------------SRGGSSCL-------- 140
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+Q CAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 141 --------RQPPSRCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 192
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 193 RMQQMAGQ 200
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF---VSYESPASAQNAI 408
LFI IP+ +++L F+ FG++ V D+ TG+ K F F S +S A+
Sbjct: 52 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGFAFKTNCSTDSAFKVGRAV 111
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNK 433
M +L G +Q+K + +++
Sbjct: 112 HKMK--ELPGMNRPIQVKPADSESR 134
>gi|195427147|ref|XP_002061640.1| GK17101 [Drosophila willistoni]
gi|194157725|gb|EDW72626.1| GK17101 [Drosophila willistoni]
Length = 645
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 89/162 (54%), Gaps = 21/162 (12%)
Query: 277 PRNYAMPPSGFVGS----------GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVA 326
P + +PP G G P PG+ +P Y P ++ P +A
Sbjct: 299 PLHLTIPPQGLANGDAAALQHAFPGLPPFPGVAFPAVY----------GQFPQALPPPLA 348
Query: 327 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 386
P+ G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+A
Sbjct: 349 AVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRA 408
Query: 387 TGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
T SKCFGFVS+++PASAQ AI MNG Q+G K+LK LKR+
Sbjct: 409 TNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKF-LKRN 449
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 5/132 (3%)
Query: 76 CHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
CH+ P + LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI+
Sbjct: 57 CHHPLIPPAIKLMNRTLQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFQPFGTIE 116
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ R
Sbjct: 117 ECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIR 176
Query: 191 RAQKAQSQANNL 202
R Q+ N L
Sbjct: 177 RMQQMAGHMNLL 188
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F+ F ++E I++ AS+GC FV
Sbjct: 78 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFQPFGTIEECTILRGPDG-ASKGCAFVKF 136
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 137 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 173
>gi|313247153|emb|CBY35974.1| unnamed protein product [Oikopleura dioica]
Length = 414
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 85/147 (57%), Gaps = 10/147 (6%)
Query: 297 GLQYPM-PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-------GSGGQIEGPP 348
G Q+ M P P G PL S G S A N NP G + GP
Sbjct: 270 GYQFVMVPNPAGGYTQVPL--SCGGPSMAALNQNPCAPQREGNFHSLVLHNFNKLLPGPD 327
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
G NLFIYH+PQEF D +L N F FG V+SAKVF+D+AT SKCFGFVSY++ SA NAI
Sbjct: 328 GCNLFIYHLPQEFTDADLANIFAPFGAVISAKVFIDRATNQSKCFGFVSYDNAPSAANAI 387
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQNKPY 435
MNG Q+G K+LKVQLKR +K +
Sbjct: 388 TSMNGFQIGMKRLKVQLKRPKAGDKNF 414
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF YG I++ ILR + +SKGCAF+K + A A+
Sbjct: 44 DRKLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEGSSKGCAFIKLANVQHAQNAIA 103
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
++G M G+S +VVK AD EKER R+ Q+
Sbjct: 104 QMHGSTTMPGASSSIVVKLADNEKERALRKMQQ 136
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F ++ ++E I++ +S+GC F+ + Q A A+
Sbjct: 46 KLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEG-SSKGCAFIKLANVQHAQNAIAQ 104
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H T+PGASS + VK AD E ER K+
Sbjct: 105 MHGSTTMPGASSSIVVKLADNEKERALRKM 134
>gi|151936117|gb|ABS18835.1| ELAV-type RNA binding protein variant D [Caenorhabditis elegans]
Length = 327
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
+LR S+GCAF+ + + A+ A + ++ ME
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTME 209
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 327 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 386
++ PST++ +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 387 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 433
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|351714059|gb|EHB16978.1| CUG-BP- and ETR-3-like factor 5 [Heterocephalus glaber]
Length = 224
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 68/90 (75%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 135 GPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQ 194
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
I MNG Q+G K+LKVQLKR + PY
Sbjct: 195 TGIQAMNGFQIGMKRLKVQLKRPKELGHPY 224
>gi|126649123|ref|XP_001388078.1| RNA binding protein [Cryptosporidium parvum Iowa II]
gi|126117166|gb|EAZ51266.1| RNA binding protein, putative [Cryptosporidium parvum Iowa II]
Length = 906
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 109/195 (55%), Gaps = 13/195 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+++ E L +FK + V V++I++K+T RG V S +AD A+
Sbjct: 306 IKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALR 365
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ K L PL+V+Y+ GE ERL + KLF+G LP+N+ E E+ L
Sbjct: 366 ELNSIKVLDELRGPLKVQYSTGEPERLGFESESCIPGVDQVKLFVGALPRNIIEDEIREL 425
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YG I ++ I+R KGCAF+KY KEQ L A+++++G + + P+ V++A
Sbjct: 426 FSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALTLADVNRPIEVRFA 485
Query: 182 DTEKERQARRAQKAQ 196
+ + AQ
Sbjct: 486 SKNHQSSTSSSLIAQ 500
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
++ GPPGAN+FI+++P E+ + L F FG +LSA + VDK +G +K FVSY++
Sbjct: 728 EVVGPPGANIFIFNVPYEWDKKSLVGLFCRFGNILSAHLMVDKTSGRNKGVAFVSYDNIH 787
Query: 403 SAQNAIAMMNG-CQLGGKKLKVQLKR 427
SA A+ MNG G+KLKV +K+
Sbjct: 788 SAAEAVNHMNGFITEQGRKLKVSIKQ 813
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAA 159
+E KLF+G +P+N+ E ++ LF +YG + ++ ++R S +G A + E+ QA A
Sbjct: 304 VEIKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFA 363
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
L +N ++ PL V+++ E ER ++ +P D Q GALP
Sbjct: 364 LRELNSIKVLDELRGPLKVQYSTGEPERLGFESESC------IPGVD-QVKLFVGALP 414
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 50/82 (60%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLFVG +P+++ E ++ +F + ++E+ I+++ + +GC FV +++ A
Sbjct: 404 DQVKLFVGALPRNIIEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFA 463
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + H TL + P++V++A
Sbjct: 464 IKSLHGALTLADVNRPIEVRFA 485
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
LF+ +P+ + +L + F+ +GRV++ V +K+TG+ + V+ ES A A A+ +
Sbjct: 308 LFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALREL 367
Query: 412 NGCQL 416
N ++
Sbjct: 368 NSIKV 372
>gi|269868218|gb|ACZ52415.1| Bruno-3 transcript variant 1, partial [Drosophila pseudoobscura]
Length = 415
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 81/134 (60%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 292 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 341
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ A+
Sbjct: 342 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAVQA 401
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 402 MNGFQIGMKRLKVQ 415
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 21/135 (15%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKME-------------------GSSVPLVVKWADTEKER 187
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKER
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPVCTTNLHSSKDINPLPYSGGASSSLVVKYADTEKER 144
Query: 188 QARRAQKAQSQANNL 202
Q RR Q+ N L
Sbjct: 145 QIRRMQQMAGHMNLL 159
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLP-------------------GASSPLQVKYADGELER 100
++QEA A+ H +T+P GASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPVCTTNLHSSKDINPLPYSGGASSSLVVKYADTEKER 144
>gi|118402071|ref|XP_001033355.1| hypothetical protein TTHERM_00421000 [Tetrahymena thermophila]
gi|89287703|gb|EAR85692.1| hypothetical protein TTHERM_00421000 [Tetrahymena thermophila
SB210]
Length = 307
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+PK + Q+ F +F + EV II+D + +GC FV S +A+KA+
Sbjct: 54 LKLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQ-HKGCAFVKFASMTDAEKAIE 112
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSALFSIYGT 128
A N T PG + +++K+AD E ERL +HKLFIG LPK+ +E + +F +G
Sbjct: 113 AVKNT-TFPGMKNNVEIKWADNEEERLGVNQDSDHKLFIGSLPKSCTEQNIKDIFEFFGE 171
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
I++L +++ +QQ ++ AFLK++ KE+A A+ +N + + + P+ V++A
Sbjct: 172 IEELHLMKDNQQNTRQ-AFLKFKQKEKAHLAIRNLNSQVYINDAENPIEVRFA 223
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+G LPK + +V FS +G I ++QI+R ++ KGCAF+K+ + A A+EA+
Sbjct: 55 KLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQHKGCAFVKFASMTDAEKAIEAV 114
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
G + +KWAD E+ER N DS H G+LP
Sbjct: 115 KNT-TFPGMKNNVEIKWADNEEERLG-------------VNQDSDHKLFIGSLP 154
>gi|269868222|gb|ACZ52417.1| Bruno-3 transcript variant 17, partial [Drosophila pseudoobscura]
Length = 351
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 81/134 (60%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 338 MNGFQIGMKRLKVQ 351
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|47212399|emb|CAF96701.1| unnamed protein product [Tetraodon nigroviridis]
Length = 795
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 634 AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 693
Query: 400 SPASAQNAIAMMNGCQLGGKKLK 422
+P SAQ AI MNG Q+G K+LK
Sbjct: 694 NPVSAQAAIQAMNGFQIGMKRLK 716
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 88 PLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I++ +ILRG S+GC
Sbjct: 159 PIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGC 218
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNA 205
AF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ RR Q+ +Q N+
Sbjct: 219 AFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNS 278
Query: 206 DSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
+ SL G G P Y QA+ S L
Sbjct: 279 ATTWGSLTGL--GGLTPQYLALLQQAASSGNL 308
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 162 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 220
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 221 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 260
>gi|383860257|ref|XP_003705607.1| PREDICTED: CUGBP Elav-like family member 2-like [Megachile
rotundata]
Length = 443
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 71/93 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
QIEGP G NLFIYH+PQ+F D +L F FG V+SAKVF+DK T +SKCFGFVSY++ A
Sbjct: 351 QIEGPEGCNLFIYHLPQQFSDTDLVTTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNAA 410
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 411 SAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 443
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 70/101 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +E +V +FS+YGTI++ +LR S SK CAF+ + +K+ A+ A++
Sbjct: 10 ERKLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIK 69
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A++ MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 70 ALHHSQTMEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 110
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ER KLFVG + K TE + MF + ++E ++++D T + S+ C FV S+Q A A
Sbjct: 10 ER-KLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGK-SKACAFVTFASKQYAINA 67
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 68 IKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 100
>gi|269868267|gb|ACZ52438.1| Bruno-3 transcript variant 4 [Drosophila virilis]
gi|269868269|gb|ACZ52439.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 256 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 305
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 306 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 365
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 366 MNGFQIGMKRLKVQ 379
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868271|gb|ACZ52440.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 256 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 305
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PA AQ AI
Sbjct: 306 NLFIYHLPQEFGDAELMQVFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPAGAQAAIQA 365
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 366 MNGFQIGMKRLKVQ 379
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868265|gb|ACZ52437.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 256 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPVGC 305
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 306 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 365
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 366 MNGFQIGMKRLKVQ 379
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|440800621|gb|ELR21657.1| CUGbinding protein LYLQ isoform, putative [Acanthamoeba castellanii
str. Neff]
Length = 106
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q EGPPGANLFIYH+P FGD +L + F +G+++SAKVF+DKATG SKCFGFVSY PA
Sbjct: 16 QGEGPPGANLFIYHLPPHFGDSDLYSHFAPYGQLVSAKVFIDKATGQSKCFGFVSYSMPA 75
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
+A+ AI MNG Q+ GK+L+VQ KR Q PY
Sbjct: 76 AAEMAIQQMNGFQVAGKRLRVQHKRSRAQ--PY 106
>gi|269868225|gb|ACZ52418.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 351
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 81/134 (60%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA+ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASARAAIQA 337
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 338 MNGFQIGMKRLKVQ 351
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868285|gb|ACZ52447.1| Bruno-3 transcript variant 17 [Drosophila virilis]
Length = 334
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 211 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 260
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 261 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 320
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 321 MNGFQIGMKRLKVQ 334
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|195117928|ref|XP_002003497.1| GI17946 [Drosophila mojavensis]
gi|193914072|gb|EDW12939.1| GI17946 [Drosophila mojavensis]
Length = 580
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 45/185 (24%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L +F++F V +N+++DK T SR
Sbjct: 298 DNIKMFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISR---------------- 341
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 342 -----------------------------ERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 372
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 373 TVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 432
Query: 193 QKAQS 197
Q+ Q+
Sbjct: 433 QQLQA 437
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++Q A
Sbjct: 340 SRER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQVGQ-SKGCAFVTFATKQNAI 397
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 398 GAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 432
>gi|120419456|gb|ABM21547.1| trinucleotide repeat containing 4 [Bos taurus]
Length = 139
Score = 119 bits (298), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/133 (44%), Positives = 86/133 (64%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGC 145
+LRG TSKGC
Sbjct: 125 TVLRGPDGTSKGC 137
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK AD+E + R+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRK 96
Score = 41.6 bits (96), Expect = 0.85, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|321461452|gb|EFX72484.1| hypothetical protein DAPPUDRAFT_9147 [Daphnia pulex]
Length = 83
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 66/82 (80%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 1 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQ 60
Query: 406 NAIAMMNGCQLGGKKLKVQLKR 427
AI MNG Q+G K+LKVQLKR
Sbjct: 61 AAIQAMNGFQIGMKRLKVQLKR 82
>gi|118404110|ref|NP_001072378.1| CUGBP Elav-like family member 4 [Xenopus (Silurana) tropicalis]
gi|123914769|sp|Q0V9L3.1|CELF4_XENTR RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|111305714|gb|AAI21491.1| bruno-like 4, RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 424
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 96/188 (51%), Gaps = 43/188 (22%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 43 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 102
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E
Sbjct: 103 KAQSALHEQKTLPGMNRPIQVKPADSE--------------------------------- 129
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ GCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 130 ----------SRGGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 179
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 180 RMQQMAGQ 187
>gi|269868220|gb|ACZ52416.1| Bruno-3 transcript variant 4, partial [Drosophila pseudoobscura]
Length = 396
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+ KVQ
Sbjct: 383 MNGFQIGMKRPKVQ 396
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ +LRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTVLRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR + N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMHQMAGHMNLL 140
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E +++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTVLRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSA 121
++QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMHQMAGHMNLLNPFVFN 146
Query: 122 LFSIYG 127
FS YG
Sbjct: 147 QFSPYG 152
>gi|209879588|ref|XP_002141234.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556840|gb|EEA06885.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 517
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV +VPK M L+ +F ++ +V E NII+D + +GC FV + EA A+
Sbjct: 199 VKLFVNRVPKWMRNEDLMKIFSKYGVVVECNIIRD--SNGPKGCAFVRFATIVEAQNAIL 256
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
H K L + P+QVKYADGE+ERL K+F+G LPK +EAE+ LF
Sbjct: 257 CIHGKTVLNEEAGPIQVKYADGEIERLGLSPDVQPCGESVKVFVGCLPKTCTEAELLTLF 316
Query: 124 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
+G + ++ I+R + SK AF+ + + A A+ ++ K+ ++ P+ V+ A
Sbjct: 317 RRFGHVDEVHIIRDDNRQSKCSAFVTFPKRYMAENAIVFLDKKYILDNGKRPIEVRLA-- 374
Query: 184 EKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLP 243
R + ++ S NN+ + P L P YN SG+Y R+
Sbjct: 375 ---RSRSKQKQLSSNHNNVRRTN--EPKLTNTNPNNNTNSYNILN--NSGNYSNASGRMQ 427
Query: 244 PMQN 247
M N
Sbjct: 428 NMDN 431
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E VK+FVG +PK TEA+LL +F+ F VDEV+II+D R S+ FV P R A+ A
Sbjct: 294 ESVKVFVGCLPKTCTEAELLTLFRRFGHVDEVHIIRDD-NRQSKCSAFVTFPKRYMAENA 352
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ K L P++V+ A
Sbjct: 353 IVFLDKKYILDNGKRPIEVRLA 374
>gi|9246975|gb|AAF86231.1|AF248649_1 RNA-binding protein BRUNOL5 [Homo sapiens]
Length = 83
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 66/82 (80%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 1 GPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQ 60
Query: 406 NAIAMMNGCQLGGKKLKVQLKR 427
AI MNG Q+G K+LKVQLKR
Sbjct: 61 AAIQAMNGFQIGMKRLKVQLKR 82
>gi|269868233|gb|ACZ52421.1| Bruno-3 transcript variant 4 [Drosophila melanogaster]
Length = 380
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 257 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 306
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+ +AT SKCFGFVS+++PASAQ AI
Sbjct: 307 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIGRATNQSKCFGFVSFDNPASAQAAIQA 366
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 367 MNGFQIGMKRLKVQ 380
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V + +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESHSEHLDRKLFVGMLSKQQTEDDVRQISHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E S KLFVG + K TE + + F ++E I++ AS+GC FV
Sbjct: 13 AENESHSEHLDRKLFVGMLSKQQTEDDVRQISHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|294884851|gb|ADF47436.1| trinucleotide repeat containing 4-like protein [Dugesia japonica]
Length = 460
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 66/84 (78%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
+ GP G+N+FIYH+PQEFGD EL F FG V+SAKV++D+AT SKCFGFVS+++ S
Sbjct: 367 LTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNS 426
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKR 427
AQ AI MNG Q+G K+LKVQLKR
Sbjct: 427 AQAAIQAMNGFQIGMKRLKVQLKR 450
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLFIGML K +E +V +F +G I++ ILR SKGCAF+KY T+ +A A+
Sbjct: 48 DRKLFIGMLGKQHTEDDVRDMFKPFGMIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIG 107
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
A++G + G+S LVVK+ADTEKERQ R+ Q+
Sbjct: 108 AMHGSMTIPGASSSLVVKFADTEKERQTRKLQQ 140
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 5 KKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP 64
K+ + E+R KLF+G + K TE + MFK F +++E I++D+ S+GC FV
Sbjct: 40 KQTQHKGEDR-KLFIGMLGKQHTEDDVRDMFKPFGMIEECTILRDQNGN-SKGCAFVKYT 97
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+R EA A+ A H T+PGASS L VK+AD E ER KL
Sbjct: 98 TRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 138
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTI--KDLQILRGSQQTSKGCAFLKYETKEQALAALEA 162
+FI LP+ +AE++ +FS +GT+ + I R + Q SK F+ ++ A AA++A
Sbjct: 375 VFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQ-SKCFGFVSFDNSNSAQAAIQA 433
Query: 163 ING 165
+NG
Sbjct: 434 MNG 436
>gi|269868231|gb|ACZ52420.1| Bruno-3 transcript variant 3 [Drosophila melanogaster]
Length = 388
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 265 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 314
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKC GFVS+++PASAQ AI
Sbjct: 315 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCSGFVSFDNPASAQAAIQA 374
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 375 MNGFQIGMKRLKVQ 388
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 131
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 132 SPYGAYAQL 140
>gi|195126493|ref|XP_002007705.1| GI13095 [Drosophila mojavensis]
gi|193919314|gb|EDW18181.1| GI13095 [Drosophila mojavensis]
Length = 611
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 78/132 (59%), Gaps = 10/132 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 287 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 336
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 337 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 396
Query: 411 MNGCQLGGKKLK 422
MNG Q+G K+LK
Sbjct: 397 MNGFQIGMKRLK 408
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|269868283|gb|ACZ52446.1| Bruno-3 transcript variant 17 [Drosophila virilis]
Length = 334
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 79/134 (58%), Gaps = 10/134 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 211 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 260
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P AQ AI
Sbjct: 261 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTGAQAAIQA 320
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 321 MNGFQIGMKRLKVQ 334
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|401405877|ref|XP_003882388.1| putative RNA binding protein [Neospora caninum Liverpool]
gi|325116803|emb|CBZ52356.1| putative RNA binding protein [Neospora caninum Liverpool]
Length = 1060
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 33/212 (15%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG++P +TE L +F +F + ++ +I+D+ T A +GC FV S +AD+A+
Sbjct: 101 IKLFVGRLPLTVTEEMLCTLFSQFGPIADLLLIRDRHTNAFKGCAFVRMQSITDADRAIR 160
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAEV 119
+ L A LQVKYA GE ERL + KLF+G LP ++ E +
Sbjct: 161 HLDSAYVLDPALGGLQVKYAVGEAERLGLPGTSGSGAAAGVDQVKLFVGSLPPDIKEDAL 220
Query: 120 SALFSIYGTIKDLQILRGSQ----------------QTSKGCAFLKYETKEQALAALEAI 163
LF +G ++++ ++R Q ++ GCAF+++ KE+AL A+ +
Sbjct: 221 RDLFERFGRVEEVFLMRDDQPLSGNHLGGGAAKPGKKSRTGCAFVRFAYKEEALFAIGEL 280
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKA 195
NGK M GS + V++A E R + AQ A
Sbjct: 281 NGKFVMPGSQRAMEVRFA--ENRRSSSSAQGA 310
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 64/93 (68%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G G Q GPPGAN+FI+HIP E+ + +L F +G VLSA++ D+ +G ++ FGFVS+
Sbjct: 776 GFGSQEHGPPGANVFIFHIPNEWSEHDLLTHFSVYGPVLSARIASDRLSGRNRGFGFVSF 835
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
+ +A A+ MNG Q+ GK+LKVQ+K+ +Q
Sbjct: 836 ANGQAAAAAVTAMNGFQVNGKRLKVQIKKGEEQ 868
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKD--------------KTTRASR-G 57
++VKLFVG +P + E L +F+ F V+EV +++D K + SR G
Sbjct: 202 DQVKLFVGSLPPDIKEDALRDLFERFGRVEEVFLMRDDQPLSGNHLGGGAAKPGKKSRTG 261
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEA 117
C FV ++EA A+ + K +PG+ ++V++A+ R G P + + +
Sbjct: 262 CAFVRFAYKEEALFAIGELNGKFVMPGSQRAMEVRFAE---NRRSSSSAQGAAPASRTAS 318
Query: 118 EVSALFSIYGTIKDLQILRGSQQ-----TSKGC----AFLKYETKEQALAALEAINGKHK 168
S S + + L G+ + S C ++ ++ L L ++G+H
Sbjct: 319 ASSCFMSSMDSSRGGSALPGADEYPENVRSTSCFPSRVDMERFSRMDPLDVLSCLDGRHD 378
Query: 169 -MEGSSVPLVV 178
G+S L +
Sbjct: 379 CFSGTSESLAI 389
>gi|195117930|ref|XP_002003498.1| GI17947 [Drosophila mojavensis]
gi|193914073|gb|EDW12940.1| GI17947 [Drosophila mojavensis]
Length = 93
Score = 117 bits (292), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/92 (61%), Positives = 68/92 (73%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
I GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++ S
Sbjct: 2 ITGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNRHS 61
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
A AI M+G Q+G K+LKVQLKR KPY
Sbjct: 62 ADAAIQAMHGFQIGTKRLKVQLKRPKDLGKPY 93
>gi|269868259|gb|ACZ52434.1| Bruno-3 transcript variant 32 [Drosophila melanogaster]
Length = 154
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 71 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 130
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 131 PASAQAAIQAMNGFQIGMKRLKVQ 154
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SK
Sbjct: 8 LQLKPAENESHSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKD-- 65
Query: 147 FLKY 150
FL +
Sbjct: 66 FLMF 69
>gi|269868261|gb|ACZ52435.1| Bruno-3 transcript variant 33 [Drosophila melanogaster]
Length = 109
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 26 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 85
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 86 PASAQAAIQAMNGFQIGMKRLKVQ 109
>gi|298710156|emb|CBJ31866.1| trinucleotide repeat containing 4, isoform CRA_d [Ectocarpus
siliculosus]
Length = 494
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGPPGANLFIYH+PQ+ D +L AF FG VLSAKV++D+A+G SK FGFVSY P+ A
Sbjct: 365 EGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHA 424
Query: 405 QNAIAMMNGCQLGGKKLKVQLKR 427
+ AIA MNG Q+G K+LKVQ KR
Sbjct: 425 EAAIAQMNGFQIGSKRLKVQHKR 447
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+E+ KLFVG PK E ++ A+F + + E+++I+++ ++GC FV +RQ A
Sbjct: 127 AEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDG-TNKGCAFVKYTTRQSAL 185
Query: 71 KAVNACHNKKTLPGASSPLQVKYAD 95
A+ A H + T+ G PL VK+AD
Sbjct: 186 DAIEALHEQYTMQGGPRPLVVKFAD 210
>gi|269868227|gb|ACZ52419.1| Bruno-3 transcript variant 5, partial [Drosophila pseudoobscura]
Length = 390
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 16/134 (11%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 350
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 316
Query: 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 410
NLFIYH+PQ FGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 317 NLFIYHLPQGFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 376
Query: 411 MNGCQLGGKKLKVQ 424
MNG Q+G K+LKVQ
Sbjct: 377 MNGFQIGMKRLKVQ 390
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGELE--RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSGHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSGHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868237|gb|ACZ52423.1| Bruno-3 transcript variant 7, partial [Drosophila melanogaster]
Length = 362
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 279 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 338
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 339 PASAQAAIQAMNGFQIGMKRLKVQ 362
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 131
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 132 SPYGAYAQL 140
>gi|269868210|gb|ACZ52411.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQ 370
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868214|gb|ACZ52413.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQ 370
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868212|gb|ACZ52412.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQ 370
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868301|gb|ACZ52455.1| Bruno-3 transcript variant 30 [Drosophila virilis]
Length = 302
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 217 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 276
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQ 424
++P SAQ AI MNG Q+G K+LKVQ
Sbjct: 277 DNPTSAQAAIQAMNGFQIGMKRLKVQ 302
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|269868245|gb|ACZ52427.1| Bruno-3 transcript variant 9 [Drosophila melanogaster]
Length = 354
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 271 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 330
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 331 PASAQAAIQAMNGFQIGMKRLKVQ 354
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868243|gb|ACZ52426.1| Bruno-3 transcript variant 9 [Drosophila melanogaster]
Length = 354
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 271 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 330
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 331 PASAQAAIQAMNGFQIGMKRLKVQ 354
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+Q+A A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQKAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868251|gb|ACZ52430.1| Bruno-3 transcript variant 28 [Drosophila melanogaster]
Length = 309
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 226 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 285
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 286 PASAQAAIQAMNGFQIGMKRLKVQ 309
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|269868206|gb|ACZ52409.1| Bruno-3 transcript variant 28, partial [Drosophila pseudoobscura]
Length = 325
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQ 325
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868281|gb|ACZ52445.1| Bruno-3 transcript variant 9 [Drosophila virilis]
Length = 353
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F +FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 270 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLSFGNVISSKVFIDRATNQSKCFGFVSFDN 329
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 330 PTSAQAAIQAMNGFQIGMKRLKVQ 353
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868253|gb|ACZ52431.1| Bruno-3 transcript variant 28 [Drosophila melanogaster]
Length = 309
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 226 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 285
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 286 PASAQAAIQAMNGFQIGMKRLKVQ 309
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|269868257|gb|ACZ52433.1| Bruno-3 transcript variant 31 [Drosophila melanogaster]
Length = 293
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 210 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 269
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 270 PASAQAAIQAMNGFQIGMKRLKVQ 293
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
TS CAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N
Sbjct: 1 TSYCCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMN 60
Query: 201 NL 202
L
Sbjct: 61 LL 62
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 54 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S C FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 1 TSYCCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 47
>gi|269868249|gb|ACZ52429.1| Bruno-3 transcript variant 26 [Drosophila melanogaster]
Length = 317
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 234 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVVSSKVFIDRATNQSKCFGFVSFDN 293
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 294 PASAQAAIQAMNGFQIGMKRLKVQ 317
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ + GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENGSRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENGSRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|356503942|ref|XP_003520758.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 496
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 44/271 (16%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K++V VP+ TE ++ +F+E + E+ ++K K T +G CFV + EAD+A+
Sbjct: 74 KVYVAPVPRTATEDEIRPVFEEHGTIVEIVLLKHKKTGTRQGSCFVKYATFDEADRAIKV 133
Query: 76 CHNKKTLPGASSPLQVKYADGELERL------------------EHKLFIGMLPKNVSEA 117
+NK T G S P+ VK+AD ELERL K+F+ + K +
Sbjct: 134 LNNKYTFAGESYPVVVKFADRELERLGVRGLCRNMEKKDPLEEVADKVFVSSINKEATNK 193
Query: 118 EVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
++ +FS YG ++D+ +++ G AF+K+ +E ALAA++ +N M G PL+
Sbjct: 194 DIEEIFSPYGHVEDIFF-----KSTHGYAFVKFSNREMALAAIKGLNKTFTMRGCDHPLI 248
Query: 178 VKWADTEKERQAR-RAQKAQSQANNLPNADSQHPSLF----------GALPMGYAPPYNG 226
V++AD +K + R AN P SQ P+++ G + + +AP ++
Sbjct: 249 VRFADPKKPKTGESRGNYLSVNANFGPC--SQEPAVWPLPNFGDSNTGGIILPHAPYHST 306
Query: 227 YGYQASGSY--------GLMQYRLPPMQNQP 249
+ S+ ++Q+ PP Q P
Sbjct: 307 IAHPQVTSHMQNWEPGATVLQHPFPPHQVHP 337
>gi|269868263|gb|ACZ52436.1| Bruno-3 transcript variant 33 [Drosophila melanogaster]
Length = 109
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 64/84 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G LFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++
Sbjct: 26 GCSISGPEGCKLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDN 85
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 86 PASAQAAIQAMNGFQIGMKRLKVQ 109
>gi|269868241|gb|ACZ52425.1| Bruno-3 transcript variant 8 [Drosophila melanogaster]
Length = 356
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+ T SKCFGFVS+++
Sbjct: 273 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRTTNQSKCFGFVSFDN 332
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 333 PASAQAAIQAMNGFQIGMKRLKVQ 356
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 70/104 (67%)
Query: 99 ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALA 158
E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +
Sbjct: 14 EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQS 73
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 74 AITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 117
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 7 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 65
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 66 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 125
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 126 SPYGAYAQL 134
>gi|269868279|gb|ACZ52444.1| Bruno-3 transcript variant 9 [Drosophila virilis]
Length = 353
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 270 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 329
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 330 PTSAQAAIQAMNGFQIGMKRLKVQ 353
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868293|gb|ACZ52451.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 307
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 224 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 283
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 284 PTSAQAAIQAMNGFQIGMKRLKVQ 307
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 9 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 62
>gi|269868291|gb|ACZ52450.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 307
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 224 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 283
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 284 PTSAQAAIQAMNGFQIGMKRLKVQ 307
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 9 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 62
>gi|269868295|gb|ACZ52452.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 307
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 224 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 283
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 284 PTSAQAAIQAMNGFQIGMKRLKVQ 307
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 9 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 62
>gi|269868297|gb|ACZ52453.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 308
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 225 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 284
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 285 PTSAQAAIQAMNGFQIGMKRLKVQ 308
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 31/54 (57%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENEGRSGCAFVKFGSQQEAQSAITNLHGSRTMPGASSSLVVKYADTEKER 63
>gi|297824821|ref|XP_002880293.1| hypothetical protein ARALYDRAFT_483907 [Arabidopsis lyrata subsp.
lyrata]
gi|297326132|gb|EFH56552.1| hypothetical protein ARALYDRAFT_483907 [Arabidopsis lyrata subsp.
lyrata]
Length = 505
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 101/181 (55%), Gaps = 9/181 (4%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K TE + +F+ + V E+ + KDK T CFV + +E + A+ A
Sbjct: 110 KLYVAPISKTSTEYDIRQVFETYGNVTEIILPKDKMTGDRAAYCFVKYKTVEEGNAAIAA 169
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFSIY 126
+ T PG PL+V++AD E ER+ KL+I L K ++ EV +FS +
Sbjct: 170 LAEQFTFPGEMLPLKVRFADAERERIGFAPVQPPDNPKLYIRCLNKQTTKMEVHEVFSRF 229
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I+D+ + + S+G AF+++ +E ALAA++ +NG M GS PL+V++AD +K
Sbjct: 230 GIIEDIYMALDDMKISRGYAFVQFSCREMALAAIKGLNGVFTMRGSDQPLIVRFADPKKP 289
Query: 187 R 187
R
Sbjct: 290 R 290
>gi|431896232|gb|ELK05648.1| CUG-BP- and ETR-3-like factor 4 [Pteropus alecto]
Length = 379
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT S FVS+++PASA
Sbjct: 293 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQS----FVSFDNPASA 348
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 349 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 379
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S++R KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 26 SQDR-KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQ 83
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 84 AAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 118
>gi|269868216|gb|ACZ52414.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFV +++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVFFDN 346
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQ 370
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|357622928|gb|EHJ74277.1| hypothetical protein KGM_22147 [Danaus plexippus]
Length = 238
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ ASAQ
Sbjct: 150 PEGGNLFIYHLPQEFTDTDLASTFLPFGHVISAKVFIDKQTNLSKCFGFVSYDNAASAQA 209
Query: 407 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
AI MNG Q+G K+LKVQLKR + ++PY
Sbjct: 210 AIQAMNGFQIGTKRLKVQLKRSKELSRPY 238
>gi|349802789|gb|AEQ16867.1| putative cugbp elav family member 1-b [Pipa carvalhoi]
Length = 339
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 67/89 (75%), Gaps = 2/89 (2%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP GAN FIYH+PQEFGDQ+L F FG ++ AKVF+DK +SKCF FVSY+
Sbjct: 253 AGSQKEGPEGANFFIYHLPQEFGDQDLLQMFMPFGNIVPAKVFIDKQN-LSKCF-FVSYD 310
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRD 428
+P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 311 NPVSAQAAIQSMNGFQIGMKRLKVQLKRS 339
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
+FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+A
Sbjct: 1 MFSQFGQIEECRILRGPDGLSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFA 60
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY 224
DT+K+++ +R + Q NA S +L G + AP Y
Sbjct: 61 DTQKDKEQKRMTQQLQQQMQQINAASMWGNLAGLSSL--APQY 101
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 34 MFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93
MF +F ++E I++ SRGC F+ +R A A+ A H +T+ G SSP+ VK+
Sbjct: 1 MFSQFGQIEECRILRGPDGL-SRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKF 59
Query: 94 ADGELERLEHKL 105
AD + ++ + ++
Sbjct: 60 ADTQKDKEQKRM 71
>gi|269868289|gb|ACZ52449.1| Bruno-3 transcript variant 24 [Drosophila virilis]
Length = 322
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 239 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 298
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
P SAQ AI MNG Q+G K LKVQ
Sbjct: 299 PTSAQAAIQAMNGFQIGMKGLKVQ 322
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 40 LVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE 99
L++ +K + GC FV S+QEA A+ H +T+PGASS L VKYAD E E
Sbjct: 17 LMNRALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKE 76
Query: 100 R 100
R
Sbjct: 77 R 77
>gi|357511413|ref|XP_003625995.1| FCA-like protein [Medicago truncatula]
gi|355501010|gb|AES82213.1| FCA-like protein [Medicago truncatula]
Length = 569
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 107/191 (56%), Gaps = 22/191 (11%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
VK++V VP+ +EA + +F+ + + EV +++DK T +G C V + EAD A+
Sbjct: 73 HVKVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATGVRQGSCLVKYSTFDEADMAI 132
Query: 74 NACHNKKTLPGASSPLQVKYADGELER---------LEH--------KLFIGMLPKNVSE 116
A N+ T PG SSP+ V++AD + ER +E K+++G + S+
Sbjct: 133 KALSNQYTFPGESSPVVVRFADRKRERFGLRDFCQNMERRDPPEVVGKVYVGCINNEASK 192
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
E+ +FS YG I+D+ +LR ++G F+K+ +E ALAA++ ++ M G PL
Sbjct: 193 QEIEEIFSPYGHIEDVVVLR-----NRGYGFVKFYNREMALAAIKGLDRTFTMRGCDQPL 247
Query: 177 VVKWADTEKER 187
+V++A+ +K R
Sbjct: 248 IVRFAEPKKPR 258
>gi|269868299|gb|ACZ52454.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 308
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 63/84 (75%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 400
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 225 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 284
Query: 401 PASAQNAIAMMNGCQLGGKKLKVQ 424
P SAQ AI MNG ++G K LKVQ
Sbjct: 285 PTSAQAAIQAMNGFRIGMKGLKVQ 308
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|30690648|ref|NP_850472.1| flowering time control protein-like protein [Arabidopsis thaliana]
gi|50897178|gb|AAT85728.1| At2g47310 [Arabidopsis thaliana]
gi|53793649|gb|AAU93571.1| At2g47310 [Arabidopsis thaliana]
gi|110738579|dbj|BAF01215.1| putative FCA-related protein [Arabidopsis thaliana]
gi|330255732|gb|AEC10826.1| flowering time control protein-like protein [Arabidopsis thaliana]
Length = 512
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 102/181 (56%), Gaps = 9/181 (4%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K TE + +F+++ V E+ + KDK T CF+ +E + A+ A
Sbjct: 111 KLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKVEEGNAAIAA 170
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFSIY 126
+ T PG P++V++A+ E ER+ KL++ L K ++ EV+ +FS Y
Sbjct: 171 LTEQFTFPGEMLPVKVRFAEAERERIGFAPVQLPDNPKLYVRCLNKQTTKMEVNEVFSRY 230
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I+D+ + + +G AF+++ KE ALAA++A+NG + GS PL+V++AD +K
Sbjct: 231 GIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQPLIVRFADPKKP 290
Query: 187 R 187
R
Sbjct: 291 R 291
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K T+ ++ +F + +++++ + D + RG FV ++ A A+ A
Sbjct: 208 KLYVRCLNKQTTKMEVNEVFSRYGIIEDIYMALDDM-KICRGYAFVQFSCKEMALAAIKA 266
Query: 76 CHNKKTLPGASSPLQVKYADGELERL 101
+ T+ G+ PL V++AD + RL
Sbjct: 267 LNGLFTIRGSDQPLIVRFADPKKPRL 292
>gi|2275209|gb|AAB63831.1| putative FCA-related protein [Arabidopsis thaliana]
Length = 324
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 102/185 (55%), Gaps = 13/185 (7%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K TE + +F+++ V E+ + KDK T CF+ +E + A+ A
Sbjct: 111 KLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKVEEGNAAIAA 170
Query: 76 CHNKKTLPGASSPLQVKYADGELERL-------------EHKLFIGMLPKNVSEAEVSAL 122
+ T PG P++V++A+ E ER+ KL++ L K ++ EV+ +
Sbjct: 171 LTEQFTFPGEMLPVKVRFAEAERERIGKCRCFAPVQLPDNPKLYVRCLNKQTTKMEVNEV 230
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
FS YG I+D+ + + +G AF+++ KE ALAA++A+NG + GS PL+V++AD
Sbjct: 231 FSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQPLIVRFAD 290
Query: 183 TEKER 187
+K R
Sbjct: 291 PKKPR 295
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K T+ ++ +F + +++++ + D + RG FV ++ A A+ A
Sbjct: 212 KLYVRCLNKQTTKMEVNEVFSRYGIIEDIYMALDDM-KICRGYAFVQFSCKEMALAAIKA 270
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGML 110
+ T+ G+ PL V++AD + RL + F L
Sbjct: 271 LNGLFTIRGSDQPLIVRFADPKKPRLGEQRFYSFL 305
>gi|387220073|gb|AFJ69745.1| rna binding protein napor, partial [Nannochloropsis gaditana
CCMP526]
Length = 139
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 63/84 (75%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
+EGP GANLFIYH+P + D +L AF FG V+SAKV+VDK +G SK FGFVSY+SP +
Sbjct: 17 LEGPAGANLFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLA 76
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKR 427
A AI MNG Q+G K+LKVQ KR
Sbjct: 77 ADAAIKAMNGFQIGTKRLKVQHKR 100
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQTSKGCAFLKYETKEQALAALEAI 163
LFI LP ++++A+++ F+ +GT+ ++ + + SKG F+ Y++ A AA++A+
Sbjct: 25 LFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLAADAAIKAM 84
Query: 164 NG 165
NG
Sbjct: 85 NG 86
>gi|194385422|dbj|BAG65088.1| unnamed protein product [Homo sapiens]
gi|194389686|dbj|BAG61804.1| unnamed protein product [Homo sapiens]
Length = 159
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 88/137 (64%), Gaps = 4/137 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A +A
Sbjct: 16 IKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I+
Sbjct: 76 QNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIE 135
Query: 131 DLQILRGSQQTSKGCAF 147
+ +ILRG S+G F
Sbjct: 136 ECRILRGPDGLSRGLLF 152
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A
Sbjct: 17 KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 77 NALHNIKTLPGMHHPIQMKPADSEK 101
>gi|391341498|ref|XP_003745067.1| PREDICTED: uncharacterized protein LOC100900989 [Metaseiulus
occidentalis]
Length = 462
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+G Q EGP G+NLFIYH+PQ+ D +L + F FG V+SAKVFVD+ T +SKCFGFVSY
Sbjct: 348 AGKQQEGPEGSNLFIYHLPQDLTDMDLVSLFAPFGEVISAKVFVDRHTQLSKCFGFVSYS 407
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 432
+ AQ AI ++G +G K+LKVQLKR N
Sbjct: 408 NGLHAQAAIRALHGFAIGDKRLKVQLKRSKMAN 440
>gi|145306684|gb|ABP57106.1| CUG-BP and ETR-3-like factor 4 isoform 2 [Gallus gallus]
Length = 371
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%)
Query: 86 SSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
+ P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG SKGC
Sbjct: 2 ARPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGC 61
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 62 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 11 DSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSH 69
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 70 AEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 108
>gi|145306682|gb|ABP57105.1| CUG-BP and ETR-3-like factor 4 isoform 1 [Gallus gallus]
Length = 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%)
Query: 86 SSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
+ P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG SKGC
Sbjct: 2 ARPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGC 61
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 62 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 11 DSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSH 69
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 70 AEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 108
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 185/424 (43%), Gaps = 55/424 (12%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ + L V +P+ +TE L +F +F +V +IKDK++ S G FV S +EA+
Sbjct: 20 TKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYGSAEEAE 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEH-KLFIGMLPKNVSEAEVSALFSIYGTI 129
A+ N TL S L+V YA +++ +++ LP +S E+ ALF YGTI
Sbjct: 80 HAIQK-MNGTTL--ESKTLKVSYARPSSVAIKNANVYVANLPPQLSLTELDALFQPYGTI 136
Query: 130 KDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
++L +G F++++ QA A+ A+NGK ++ G + PL+VK+A+ K
Sbjct: 137 ITSKVLTDEDTGAGRGVGFVRFDKYTQAEVAIAALNGK-QLVGGTQPLLVKFANPPKAAT 195
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
AN + + + G+ + Y GS G M++
Sbjct: 196 PLTGTVPGGLANQIMTQTQKRLNNNGSSSSAAS--SMSYTSTNGGSVGPMRH-------- 245
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP--MPYPG 306
IP V SNM P S +G P G+ P M
Sbjct: 246 ------IPTV--------------SNMRYN----PVSSLPTAGLPTAAGMVNPAAMAALT 281
Query: 307 GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQEL 366
GM P + +++P VA N ST +S G P +F+Y++P+ D L
Sbjct: 282 GMTTGVP---NLANLAP-VAGGNGSTMTS---------PGDPSYCVFVYNLPETCQDFLL 328
Query: 367 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426
F FG + S V D +G+ K +GFV+ +S A +AI +NG GK L+V K
Sbjct: 329 YQLFSPFGAITSVNVIRDLKSGLCKRYGFVNMKSYEDACSAIMTLNGYVHDGKTLQVSFK 388
Query: 427 RDNK 430
K
Sbjct: 389 NQKK 392
>gi|64213752|gb|AAY41232.1| RLS [synthetic construct]
Length = 175
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 79 KKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D+ I+
Sbjct: 16 RYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIM 75
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 76 KDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 127
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ ++E+ + E KLFV + K T ++ +F + V++V I+KD R SRGC FV
Sbjct: 31 ADGERERHGAIEH-KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFV 88
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
SR+ A A++A + G PL +++AD
Sbjct: 89 KFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 122
>gi|148699458|gb|EDL31405.1| mCG145499 [Mus musculus]
Length = 376
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 76/121 (62%)
Query: 82 LPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT 141
LP + P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +
Sbjct: 56 LPKMARPIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGS 115
Query: 142 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANN 201
SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 116 SKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGI 175
Query: 202 L 202
L
Sbjct: 176 L 176
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 78 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 136
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 137 LHGSQTMPGASSSLVVKFADTDKERTLRRM 166
>gi|269868138|gb|ACZ52375.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|330794954|ref|XP_003285541.1| hypothetical protein DICPUDRAFT_97075 [Dictyostelium purpureum]
gi|325084544|gb|EGC37970.1| hypothetical protein DICPUDRAFT_97075 [Dictyostelium purpureum]
Length = 190
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
Q GP G+NLF+Y+IP F DQEL FQ +G V+SAKV++DK TGVSK FGF+SY++P
Sbjct: 98 QSVGPNGSNLFVYNIPNYFTDQELSTLFQQYGNVVSAKVYLDKNTGVSKGFGFISYDNPT 157
Query: 403 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
SA AI+ +NG + GKKLKV LK+ ++PY
Sbjct: 158 SASLAISNLNGSMMVGKKLKVSLKQAGHGSQPY 190
>gi|302830592|ref|XP_002946862.1| hypothetical protein VOLCADRAFT_72841 [Volvox carteri f.
nagariensis]
gi|300267906|gb|EFJ52088.1| hypothetical protein VOLCADRAFT_72841 [Volvox carteri f.
nagariensis]
Length = 450
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 102/177 (57%), Gaps = 12/177 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K+FVGQVP +T+ Q+ A+F ++ + + +I + R S+GC V EA+ A+
Sbjct: 16 KVFVGQVPHEVTQDQVFALFSKYGTIKKCALITGQDGR-SKGCAMVTYDRWAEAELAIEH 74
Query: 76 CHNKKTLPGASSPLQVKYADGELERLE--------HKLFIGMLPKNVSEAEVSALFSIYG 127
+ L G + L VK+AD R + KLF+G +P++ +E + LF+ YG
Sbjct: 75 ENGTANLGGGRT-LLVKFADPPRGRGDGPVMGVAPKKLFVGQIPQHTTEQHIRTLFAAYG 133
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
TI D+ +L ++ + GCAF+ +E QA A+ ++NG+ +EG++ P+VVK+AD +
Sbjct: 134 TITDVHVL--NKGNAPGCAFVTFERWSQAENAMLSLNGQTLIEGATTPMVVKFADAK 188
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E K+F+G +P V++ +V ALFS YGTIK ++ G SKGCA + Y+ +A A+E
Sbjct: 14 EPKVFVGQVPHEVTQDQVFALFSKYGTIKKCALITGQDGRSKGCAMVTYDRWAEAELAIE 73
Query: 162 AINGKHKMEGSSVPLVVKWADTEKER 187
NG + G L+VK+AD + R
Sbjct: 74 HENGTANLGGGRT-LLVKFADPPRGR 98
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLFIG +P +EA++ +FS G I +L ILR Q SKGCAFL YE + A A+ +
Sbjct: 361 KLFIGQVPFEANEADLWPIFSPLGNILELVILR-HQGKSKGCAFLTYENRTDAEKAIRTL 419
Query: 164 NGKHKMEGSSVP----LVVKWADT 183
+ + + +S P L VK+A+T
Sbjct: 420 DSQVSV--TSDPRGRLLTVKYANT 441
>gi|397632370|gb|EJK70525.1| hypothetical protein THAOC_08111, partial [Thalassiosira oceanica]
Length = 548
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 62/83 (74%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP GANLFIYH+P + D +L AF FG V+SAKV+VD+ TG SK FGFVSY+S SA
Sbjct: 366 EGPAGANLFIYHLPIDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVMSA 425
Query: 405 QNAIAMMNGCQLGGKKLKVQLKR 427
+ AI MNG Q+G K+LKVQ KR
Sbjct: 426 ELAIEQMNGFQIGNKRLKVQHKR 448
>gi|269868277|gb|ACZ52443.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 372
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 7 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 66
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 67 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 122
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 12 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 70
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 71 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 107
>gi|269868273|gb|ACZ52441.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 373
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|237836675|ref|XP_002367635.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|211965299|gb|EEB00495.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|221483936|gb|EEE22240.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221505218|gb|EEE30872.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 230
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 30/187 (16%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG++P +TE L +F +F + +V +I+D+ T A +GC FV S +AD+A+
Sbjct: 39 VKLFVGRLPLTVTEDILCTLFNQFGPIADVVLIRDRHTNAFKGCAFVTMQSITDADRAIR 98
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAEV 119
+ L A LQVKYA GE ERL + KLF+G LP ++ E +
Sbjct: 99 HLDSAYVLDPALGGLQVKYAVGEAERLGLPGTSGSGAAAGVDQVKLFVGSLPPDIKEDAL 158
Query: 120 SALFSIYGTIKDLQIL---------------RGSQQTSKGCAFLKYETKEQALAALEAIN 164
LF +G ++++ ++ R +++ GCAF+++ KE+A A+ +N
Sbjct: 159 RDLFERFGRVEEVFLMKDEPGNGANLSGGAPRPGKKSRTGCAFVRFAYKEEAFFAISELN 218
Query: 165 GKHKMEG 171
GK M G
Sbjct: 219 GKVIMPG 225
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEA 162
KLF+G LP V+E + LF+ +G I D+ ++R + KGCAF+ ++ A A+
Sbjct: 40 KLFVGRLPLTVTEDILCTLFNQFGPIADVVLIRDRHTNAFKGCAFVTMQSITDADRAIRH 99
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
++ + ++ + L VK+A E ER
Sbjct: 100 LDSAYVLDPALGGLQVKYAVGEAER 124
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDK--------------TTRASRGC 58
++VKLFVG +P + E L +F+ F V+EV ++KD+ ++ GC
Sbjct: 140 DQVKLFVGSLPPDIKEDALRDLFERFGRVEEVFLMKDEPGNGANLSGGAPRPGKKSRTGC 199
Query: 59 CFVICPSRQEADKAVNACHNKKTLPG 84
FV ++EA A++ + K +PG
Sbjct: 200 AFVRFAYKEEAFFAISELNGKVIMPG 225
>gi|269868275|gb|ACZ52442.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 372
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 7 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 66
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 67 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 122
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 12 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 70
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 71 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 107
>gi|269868235|gb|ACZ52422.1| Bruno-3 transcript variant 4 [Drosophila melanogaster]
Length = 380
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|151936113|gb|ABS18833.1| ELAV-type RNA binding protein variant B [Caenorhabditis elegans]
Length = 193
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D +
Sbjct: 115 ALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 135 LRGSQQTSKG 144
LR S+G
Sbjct: 174 LRDQDGKSRG 183
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 327 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 386
++ PST++ +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 387 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 433
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|388506964|gb|AFK41548.1| unknown [Medicago truncatula]
Length = 498
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 103/190 (54%), Gaps = 22/190 (11%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VK++V VP+ +EA + +F+ + + EV +++DK T +G C V + AD +
Sbjct: 74 VKVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATGVRQGSCLVKYSTFDVADMTIK 133
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---------LEH--------KLFIGMLPKNVSEA 117
A N+ T PG SSP+ V++ D + ER +E K+++G + S+
Sbjct: 134 ALSNQYTFPGESSPVVVRFTDRKRERFGLRDFCQNMERRDPPEVVGKVYVGCINNEASKQ 193
Query: 118 EVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
E+ +FS YG I+D+ +LR ++ F+K+ +E ALAA++ ++ M G PL+
Sbjct: 194 EIEEIFSPYGHIEDVVVLR-----NRRYGFVKFYNREMALAAIKGLDRTFTMRGCDQPLI 248
Query: 178 VKWADTEKER 187
V++A+ +K R
Sbjct: 249 VRFAEPKKPR 258
>gi|384247531|gb|EIE21017.1| RNA-binding domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 344
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 103/197 (52%), Gaps = 14/197 (7%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M E +SE R LFVGQVP + E L +F F V ++++K + RGC
Sbjct: 1 MLPRMGEPVASEPR--LFVGQVPSDVREEDLWPLFTPFGTVRNLHMLKGSDGK-PRGCAM 57
Query: 61 VICPSRQEADKAVNACHNKKTLP--GASSPLQVKYAD---------GELERLEHKLFIGM 109
V+ +A+ A A + L G PL V +A+ E KLF+G
Sbjct: 58 VLFQRWAQAEAAAEALDGQLVLETGGQRKPLVVHFANPRRAPPGQPAEPGIAPRKLFVGQ 117
Query: 110 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
+P++V+E + LF YG I+ + ILR + S GCAF++++ QA A+EA NGK ++
Sbjct: 118 VPRDVTEDTLRPLFEPYGDIEHINILRTHRGQSAGCAFVQFQKWAQAEVAMEAHNGKTRL 177
Query: 170 EGSSVPLVVKWADTEKE 186
S VPLVVK+AD +++
Sbjct: 178 GNSEVPLVVKFADAKRK 194
>gi|452823093|gb|EME30106.1| RNA-binding protein [Galdieria sulphuraria]
Length = 477
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M +S + + K+F+GQ+P ++ E L + + + V E I++++ T SRGC F
Sbjct: 26 MTQSPSTRLFKDSPCKIFIGQLPSNVVEEDLRRICEPYGTVLETTIVRNRMTNQSRGCGF 85
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
+ +R+EAD A+ A H K P S PLQV+ A+ + E KL+IG L V E ++
Sbjct: 86 CVFHNREEADNAIQALHGTKPFPSGSKPLQVRLAEKNSDFSETKLYIGHLEPIVEEQQLR 145
Query: 121 ALFSIYGTIKDLQILR-----GSQQTSKGCAFLKYETKEQAL-AALEAINGKHKMEGSSV 174
F+ +G I D+ I+R + F+++ E A A L A NG+ +E
Sbjct: 146 NAFTKFGEIVDVNIVRPRNVDNQHNSPYNYGFVEFSGNEAADNAILSAKNGQVWLENGKP 205
Query: 175 PLVVKWADTEKERQARRAQ 193
V++A + R R +
Sbjct: 206 LTEVRYARLSRNRYGRNSD 224
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 402
++ GP NLF+Y IP ++ D L N F FG++LS+ VF+DK T SK FGFVSY P
Sbjct: 384 RVRGPSECNLFVYGIPPDWDDAMLANLFLPFGKLLSSNVFIDKRTQRSKGFGFVSYAYPD 443
Query: 403 SAQNAIAMMNGCQL-GGKKLKVQLKRDNKQN 432
SA AIAM+NG L G+ LKV LK++ N
Sbjct: 444 SAHMAIAMLNGMTLPNGRTLKVSLKKEKNDN 474
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
+FI +P +++L + +G VL + ++ T S+ GF + + A NAI +
Sbjct: 42 IFIGQLPSNVVEEDLRRICEPYGTVLETTIVRNRMTNQSRGCGFCVFHNREEADNAIQAL 101
Query: 412 NGCQ---LGGKKLKVQLKRDN 429
+G + G K L+V+L N
Sbjct: 102 HGTKPFPSGSKPLQVRLAEKN 122
>gi|338727851|ref|XP_001916440.2| PREDICTED: CUGBP Elav-like family member 4-like [Equus caballus]
Length = 412
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 34/183 (18%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCLFLTVCERSLC-K 109
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A + H ++ LP + P+QVK AD E S S L
Sbjct: 110 ANSVLHWQEVLPSMNRPIQVKPADSE-----------------SRGGSSCL--------- 143
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+Q CAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 144 -------RQPPSRCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRR 196
Query: 192 AQK 194
Q+
Sbjct: 197 MQQ 199
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG
Sbjct: 362 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG 411
>gi|302832507|ref|XP_002947818.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
gi|300267166|gb|EFJ51351.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
Length = 1966
Score = 104 bits (259), Expect = 9e-20, Method: Composition-based stats.
Identities = 57/203 (28%), Positives = 111/203 (54%), Gaps = 16/203 (7%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
+LFVG VP+ EA L F++ +V ++ +++D+T+ SRGC FV + +EA+ A+
Sbjct: 31 RLFVGSVPRTAVEATLREYFEQCGVVRDLAVLRDRTSGKSRGCAFVSYLTLEEAEAAIQK 90
Query: 76 CHNKKTLPGASSPLQVKYAD-------GELERLEHKLFIGMLPKNV--------SEAEVS 120
+ LPG+ +PL+V++A GE ++F +P + E E+
Sbjct: 91 FDRQLMLPGSQTPLEVRFAKNHSYVQAGEGPSGNRQIFFSRVPLTLKVCHHVAYEEDEIL 150
Query: 121 ALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
+LF YG ++ + + + + SKGC F++ T+E A+AA+E ++ +H + + + V+
Sbjct: 151 SLFLAYGEVETINVFKCRRSGRSKGCGFIEMRTREAAIAAMENLDERHVFDSTGTAISVR 210
Query: 180 WADTEKERQARRAQKAQSQANNL 202
WAD + +++ ++A + N +
Sbjct: 211 WADPDLQQRKKKAMDDANAENRM 233
Score = 92.4 bits (228), Expect = 4e-16, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 28 EAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87
E ++L++F + V+ +N+ K + + S+GC F+ +R+ A A+ + +
Sbjct: 146 EDEILSLFLAYGEVETINVFKCRRSGRSKGCGFIEMRTREAAIAAMENLDERHVFDSTGT 205
Query: 88 PLQVKYADGELERLEHK-----------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+ V++AD +L++ + K LF + ++ +E +V LFS +G + D+ + R
Sbjct: 206 AISVRWADPDLQQRKKKAMDDANAENRMLFFAKVLRSTTEDDVRRLFSRFGKVYDINLFR 265
Query: 137 GSQ--QTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
Q T+KGC + A+AA+ A++G H EG P+VVKW DT +R+ R
Sbjct: 266 AFQGAPTTKGCGLVTMSQHSDAVAAIAALDGIHVWEGMDCPMVVKWMDTALQRRRREQHL 325
Query: 195 AQSQANNLPNA 205
A + LP++
Sbjct: 326 ANIRQTPLPSS 336
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALE 161
H+LF+G +P+ EA + F G ++DL +LR + S+GCAF+ Y T E+A AA++
Sbjct: 30 HRLFVGSVPRTAVEATLREYFEQCGVVRDLAVLRDRTSGKSRGCAFVSYLTLEEAEAAIQ 89
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+ + + GS PL V++A QA Q
Sbjct: 90 KFDRQLMLPGSQTPLEVRFAKNHSYVQAGEGPSGNRQ 126
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G +P+ TE LLA+F+ V E+ I+ DK TR +G FV +R++A++A+
Sbjct: 521 VKLFIGNIPRGCTEKHLLALFQSIGKVVELVIMYDKVTREPKGSAFVWYATREDAERAIL 580
Query: 75 ACHNKKTLPGASS----PLQVKYADGELERL 101
+ + P S PL V+ A R+
Sbjct: 581 QFNLRPVFPDPSGAQDRPLVVRKAKARSSRM 611
Score = 42.7 bits (99), Expect = 0.32, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
KLFIG +P+ +E + ALF G + +L I+ + KG AF+ Y T+E A A+
Sbjct: 522 KLFIGNIPRGCTEKHLLALFQSIGKVVELVIMYDKVTREPKGSAFVWYATREDAERAILQ 581
Query: 163 INGKHKMEGSS----VPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
N + S PLVV+ A R A + A L A + GA+P
Sbjct: 582 FNLRPVFPDPSGAQDRPLVVRKAKARSSRMVVSAASMYAAATTLGQA-----APLGAMP 635
>gi|294877844|ref|XP_002768155.1| ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
gi|239870352|gb|EER00873.1| ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
Length = 391
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTT-RASRGCCFVICPSRQEADKAV 73
V+LFVG++P E + +F+ + V EV +I+ K + GC FV + EA A+
Sbjct: 9 VRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQTGCAFVKFGAVHEAATAI 68
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFS 124
+ + A +QV++A+GE ERL KLF+G +P + S+ E+ +F
Sbjct: 69 KSLNGTYKADDAPGFVQVQFANGEPERLGLPEDTEGYSQKLFVGNVPPSTSDDELKQIFD 128
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + + L + + AF+++ K AL A++A+N K+ G P+ VK ADT
Sbjct: 129 EYGNVTEAYSLESKRASGNKAAFVRFSKKSDALKAIDALNDKYTFPGEPHPITVKCADTR 188
Query: 185 KERQARRAQ 193
++R A + +
Sbjct: 189 EQRLAHKQE 197
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQ 155
R+ +LF+G LP +E + LF YG ++++ ++R G QQT GCAF+K+ +
Sbjct: 6 RIPVRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQT--GCAFVKFGAVHE 63
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A A++++NG +K + + + V++A+ E ER
Sbjct: 64 AATAIKSLNGTYKADDAPGFVQVQFANGEPER 95
>gi|269868239|gb|ACZ52424.1| Bruno-3 transcript variant 7 [Drosophila melanogaster]
Length = 362
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 89 LQVKYADG--ELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENVSRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S KLFVG + K TE + +F F ++E I++ AS+GC FV S+QE
Sbjct: 18 RSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKFGSQQE 76
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGT 128
A A+ H +T+PGASS L VKYAD E ER ++ N+ V FS YG
Sbjct: 77 AQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFSPYGA 136
Query: 129 IKDL 132
L
Sbjct: 137 YAQL 140
>gi|26350575|dbj|BAC38924.1| unnamed protein product [Mus musculus]
Length = 148
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 4 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 63
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT--- 120
Query: 207 SQHPSLFGALPMGYAPPYNGYGYQASG 233
PSL LP PY+ Y SG
Sbjct: 121 ---PSL--TLPFS---PYSAYAQAVSG 139
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S
Sbjct: 13 ESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSH 70
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 71 TEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 109
>gi|300123103|emb|CBK24110.2| unnamed protein product [Blastocystis hominis]
Length = 372
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 62/88 (70%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
SG EGP GANLF+YH+P E D +L F +G +LSAKV+VDK TG SK FGFVS+
Sbjct: 274 SGAFQEGPEGANLFVYHLPHEMADSDLTTLFVPYGTILSAKVYVDKQTGESKGFGFVSFN 333
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKR 427
S +AQ AI MNG Q+ K+LKVQ+K+
Sbjct: 334 SFEAAQEAIRHMNGFQIDSKRLKVQVKK 361
>gi|449470886|ref|XP_002191720.2| PREDICTED: CUGBP Elav-like family member 4-like [Taeniopygia
guttata]
Length = 365
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG SKGCAF
Sbjct: 4 PIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+KY + +A AA+ +++G M G+S LVVK+ADT+KER RR + Q
Sbjct: 64 VKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQ 114
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K +E + +F+ F ++E I++ AS+GC FV S EA A
Sbjct: 17 EDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDG-ASKGCAFVKYGSHAEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+N+ H +T+PGASS L VK+AD + ER ++
Sbjct: 76 INSLHGSQTMPGASSSLVVKFADTDKERTLRRM 108
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 394 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
GFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 324 GFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 365
>gi|301108515|ref|XP_002903339.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262097711|gb|EEY55763.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 255
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 81/136 (59%), Gaps = 8/136 (5%)
Query: 298 LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHI 357
+QYP PY GG P + G V P ++ G +GPPG NLF++HI
Sbjct: 100 MQYPPPY-GGSSYMYPFPQAYGYPPQIVGPGPPIQTTESG-------QGPPGCNLFVFHI 151
Query: 358 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 417
P + +Q+L N F FG V+SA++ V+K TG S+ FGFVSY++ SA+ AI MNG Q+G
Sbjct: 152 PNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVG 211
Query: 418 GKKLKVQLKRDNKQNK 433
K+LKVQ K++ Q +
Sbjct: 212 RKRLKVQHKKEKSQGQ 227
>gi|348676035|gb|EGZ15853.1| hypothetical protein PHYSODRAFT_346711 [Phytophthora sojae]
Length = 264
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 291 GYPAVPG--LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 348
GYP G +QYP PY GG P + G V P ++ G +GPP
Sbjct: 98 GYPQPYGQPMQYPPPY-GGSGYMYPFPQAYGYPPQIVGPGPPIQTTESG-------QGPP 149
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
G NLF++HIP + +Q+L N F FG V+SA++ V+K TG S+ FGFVSY++ SA+ AI
Sbjct: 150 GCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAI 209
Query: 409 AMMNGCQLGGKKLKVQLKRDNKQ 431
MNG Q+G K+LKVQ K++ Q
Sbjct: 210 KGMNGFQVGRKRLKVQHKKEKNQ 232
>gi|325191692|emb|CCA25727.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 260
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 65/89 (73%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
+GPPG NLF++HIP + +Q+L N F +G V+SA++ V+K TG S+ FGFVSY++P SA
Sbjct: 147 QGPPGCNLFVFHIPNDMTNQDLFNYFATYGNVISARIMVEKETGRSRGFGFVSYDNPPSA 206
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
AI MNG Q+G K+LKVQ K++ N+
Sbjct: 207 DAAIKGMNGFQVGRKRLKVQHKKERDPNQ 235
>gi|118379755|ref|XP_001023043.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila]
gi|89304810|gb|EAS02798.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila
SB210]
Length = 474
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+GQVPK E+ L F++ + ++ +I+D+ R +GC F S EA+K +
Sbjct: 95 IKLFIGQVPKDWQESDLKIFFEKHTSITQIEVIRDQKFR-HQGCAFATFSSMSEAEKVIE 153
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSALFSIYGT 128
NK P + + +K+A GE ERL HKL I LP +S+A +S +F +G
Sbjct: 154 FYKNKH-FPNSKQEIIMKWASGEEERLGVSENSSHKLIIKNLPALISDASISNIFDNFGR 212
Query: 129 IKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I+ L+++R + + KG AF+KY KE A A++ +N ++ + L V + + ++
Sbjct: 213 IQQLKVIRDKKTSECKGHAFIKYYEKESAHLAVQNLNKQNIYLIQNKKLKVSFIEKSYQK 272
Query: 188 QARRAQKAQSQANN 201
+ ++ K Q N
Sbjct: 273 KQKQILKYMKQNTN 286
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++GP +N+F++H+P+++ ++ L F +G ++S + K G S+ +GFVS+ P
Sbjct: 376 VQGPSHSNIFVFHLPKQYNEKNLFELFSGYGNIISITI-CRKQNGESRGYGFVSFNQPYE 434
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKR 427
A +AI +NG L GK++KV+LK+
Sbjct: 435 AAHAIKELNGLNLMGKRIKVELKQ 458
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 411
L I ++P D + N F FGR+ KV DK T K F+ Y SA A+ +
Sbjct: 189 LIIKNLPALISDASISNIFDNFGRIQQLKVIRDKKTSECKGHAFIKYYEKESAHLAVQNL 248
Query: 412 NGCQ---LGGKKLKVQLKRDNKQNK 433
N + KKLKV + Q K
Sbjct: 249 NKQNIYLIQNKKLKVSFIEKSYQKK 273
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAIN 164
+F+ LPK +E + LFS YG I + I R S+G F+ + +A A++ +N
Sbjct: 384 IFVFHLPKQYNEKNLFELFSGYGNIISITICRKQNGESRGYGFVSFNQPYEAAHAIKELN 443
Query: 165 GKHKMEGSSVPLVVKWADTEK 185
G + M G + + +K EK
Sbjct: 444 GLNLM-GKRIKVELKQTHIEK 463
>gi|281350688|gb|EFB26272.1| hypothetical protein PANDA_008623 [Ailuropoda melanoleuca]
Length = 245
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Query: 88 PLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG
Sbjct: 4 PIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRG 63
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER RR Q+
Sbjct: 64 PDGNSKGCAFVKYSSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAG 123
Query: 198 Q 198
Q
Sbjct: 124 Q 124
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S++R KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 26 SQDR-KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQ 83
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+N+ H +T+PGASS L VK+AD + ER ++
Sbjct: 84 AAINSLHGSQTMPGASSSLVVKFADTDKERTMRRM 118
>gi|294936191|ref|XP_002781649.1| Nuclear polyadenylated RNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
gi|239892571|gb|EER13444.1| Nuclear polyadenylated RNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
Length = 451
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTT-RASRGCCFVICPSRQEADKAV 73
V+LFVG++P E + +F+ + V EV +I+ K + GC FV + EA A+
Sbjct: 9 VRLFVGRLPATWQEQNIRDLFEAYGEVQEVGMIRPKDNGKQQTGCAFVKFGAVHEAATAI 68
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFS 124
+ + +QV++A+GE ERL KLF+G +P + ++ E+ +F
Sbjct: 69 KSLNGTYKADDVCGFIQVQFANGEPERLGLPEDTEGYSQKLFVGNIPPSTTDEELKRIFD 128
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + + L + + AF++Y K A+ A+EA+N K+ G P+ VK ADT
Sbjct: 129 EYGNVTEAYGLESKRASGNKAAFVRYSKKSDAVKAIEALNEKYTFPGEPHPITVKCADTR 188
Query: 185 KERQARRAQ 193
++R A + +
Sbjct: 189 EQRLAHKQE 197
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 409
AN+F+Y+IP ++ + +L F G + + K+ VD T +SK +GFVS+ SA A+
Sbjct: 327 ANVFVYNIPADWREGDLAREFGNCGSISTTKIIVDNVTNLSKGYGFVSFNDVPSAVAAVR 386
Query: 410 MMNG-CQLGGKKLKVQLKR 427
M+G GK+L+VQ+K+
Sbjct: 387 NMDGFATHTGKRLQVQIKK 405
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQ 155
R+ +LF+G LP E + LF YG ++++ ++R G QQT GCAF+K+ +
Sbjct: 6 RIPVRLFVGRLPATWQEQNIRDLFEAYGEVQEVGMIRPKDNGKQQT--GCAFVKFGAVHE 63
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A A++++NG +K + + V++A+ E ER
Sbjct: 64 AATAIKSLNGTYKADDVCGFIQVQFANGEPER 95
>gi|301108523|ref|XP_002903343.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262097715|gb|EEY55767.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 260
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 8/134 (5%)
Query: 298 LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHI 357
+QYP PY GG P + G V P ++ G +GPPG NLF++HI
Sbjct: 105 MQYPPPY-GGSGYMYPFPQAYGYPPQIVGPGPPIQTTESG-------QGPPGCNLFVFHI 156
Query: 358 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 417
P + +Q+L N F FG V+SA++ V+K TG S+ FGFVSY++ SA+ AI MNG Q+G
Sbjct: 157 PNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVG 216
Query: 418 GKKLKVQLKRDNKQ 431
K+LKVQ K++ Q
Sbjct: 217 RKRLKVQHKKEKSQ 230
>gi|118402075|ref|XP_001033357.1| hypothetical protein TTHERM_00421020 [Tetrahymena thermophila]
gi|89287705|gb|EAR85694.1| hypothetical protein TTHERM_00421020 [Tetrahymena thermophila
SB210]
Length = 756
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 14/169 (8%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K+M E L F+++ + +V +I+DK + +GC FV+ S A+ A+ A K LP
Sbjct: 75 KNMEENDLKTFFEKYGEIVKVQVIRDKNNQ-HKGCAFVVFASILCANIAIEALKATK-LP 132
Query: 84 GASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
G VK+AD E +RL ++ L++ +PKN SE E+ +F YG +K++ I +
Sbjct: 133 G------VKWADNEPDRLGIRQDQDYVLYVAHIPKNASEPEIRNVFENYGIVKEVDIPKD 186
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
TS+G F+K+E EQA+ A +A++ K + + LVVK+ D +K+
Sbjct: 187 QSGTSRGFVFVKFENIEQAILAKQALHEKQVLNNQTQSLVVKFYDPKKK 235
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GPPGANLFI+H+P ++ D +L F+ FG +LSA+V + + G SK +GFVSY SP AQ
Sbjct: 657 GPPGANLFIFHLPNDYRDSDLLRLFKKFGDLLSARV-ITRPDGSSKGYGFVSYTSPDGAQ 715
Query: 406 NAIAMMNGCQ 415
AI MNG Q
Sbjct: 716 QAIQQMNGLQ 725
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L+V +PK+ +E ++ +F+ + +V EV+I KD++ SRG FV + ++A A A
Sbjct: 154 LYVAHIPKNASEPEIRNVFENYGIVKEVDIPKDQSG-TSRGFVFVKFENIEQAILAKQAL 212
Query: 77 HNKKTLPGASSPLQVKYAD 95
H K+ L + L VK+ D
Sbjct: 213 HEKQVLNNQTQSLVVKFYD 231
>gi|426386616|ref|XP_004059779.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Gorilla
gorilla gorilla]
gi|194376596|dbj|BAG57444.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 4 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 63
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL---- 119
Query: 207 SQHPSLFGALPMGYAPPYNGY 227
PSL LP PY+ Y
Sbjct: 120 --TPSL--TLPFS---PYSAY 133
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 10 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 67
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 68 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 109
>gi|145306686|gb|ABP57107.1| CUG-BP and ETR-3-like factor 5 [Gallus gallus]
Length = 371
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 87 SPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
+P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG SKGC
Sbjct: 2 APIQVKPADSESRGGRDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGC 61
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 62 AFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQ 114
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 9 ADSESRGGRDR-KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKF 66
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 67 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|47215644|emb|CAG01361.1| unnamed protein product [Tetraodon nigroviridis]
Length = 267
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 15/139 (10%)
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEV 119
D + AC+ + T P+QVK AD E + + KLF+GML K +E +V
Sbjct: 102 DGEMRACNGRMT-----RPIQVKPADSESRGAVSLSANCPKEDRKLFVGMLNKQQTEEDV 156
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK
Sbjct: 157 YRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVK 216
Query: 180 WADTEKERQARRAQKAQSQ 198
+ADT+KER RR Q+ Q
Sbjct: 217 FADTDKERTIRRMQQMVGQ 235
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+E KLFVG + K TE + +F+ + +++E +++ S+GC FV + EA
Sbjct: 137 KEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGN-SKGCAFVKFSTHTEAQS 195
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 196 AISALHGSQTMPGASSSLVVKFADTDKERTIRRM 229
>gi|149034410|gb|EDL89147.1| similar to bruno-like 5, RNA binding protein (predicted) [Rattus
norvegicus]
Length = 319
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 12/142 (8%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 4 PIQVKPADSENRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 63
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL---- 119
Query: 207 SQHPSLFGALPMGYAPPYNGYG 228
PSL LP PY+ Y
Sbjct: 120 --TPSL--TLPFS---PYSAYA 134
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 10 ADSENRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 67
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 68 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 109
>gi|50725240|dbj|BAD34210.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
Length = 546
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 88 PLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG 144
P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D+ I++ + S+G
Sbjct: 3 PIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRG 62
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
C F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 63 CGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 105
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ ++E+ + E KLFV + K T ++ +F + V++V I+KD R SRGC FV
Sbjct: 9 ADGERERHGAIEH-KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGM-RQSRGCGFV 66
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
SR+ A A++A + G PL +++AD + R
Sbjct: 67 KFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 105
>gi|297275215|ref|XP_001106276.2| PREDICTED: CUGBP Elav-like family member 4-like [Macaca mulatta]
Length = 438
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 67/101 (66%)
Query: 98 LERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQAL 157
L++ + KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A
Sbjct: 120 LQKEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQ 179
Query: 158 AALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 180 AAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 220
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+E KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 122 KEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQA 180
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 181 AINALHGSQTMPGASSSLVVKFADTDKERTMRRM 214
>gi|328722643|ref|XP_001943968.2| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Acyrthosiphon pisum]
Length = 389
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLFIGML K +SE ++ +F +G I++ +LR SKGCAF+ Y TK+ A+AA++
Sbjct: 7 ERKLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNGVSKGCAFVTYTTKQNAIAAIK 66
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
++ MEG + PLVVK+ADT+KE+ +R Q+ Q+
Sbjct: 67 GMHHSQTMEGCTCPLVVKFADTQKEKDQKRMQQMQA 102
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+S ER KLF+G + K ++E + MF+ F ++E ++++D S+GC FV ++Q A
Sbjct: 4 ASPER-KLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNG-VSKGCAFVTYTTKQNA 61
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ H+ +T+ G + PL VK+AD + E+ + ++
Sbjct: 62 IAAIKGMHHSQTMEGCTCPLVVKFADTQKEKDQKRM 97
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 395 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
FVSY++ SAQ AI MN Q+G K+LKVQLKR + ++PY
Sbjct: 349 FVSYDNAYSAQAAIQTMNSYQVGNKRLKVQLKRPKEASRPY 389
>gi|296222551|ref|XP_002757237.1| PREDICTED: CUGBP Elav-like family member 4-like [Callithrix
jacchus]
Length = 479
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 77 HNKKTLPGASSPLQVKYADGELERL-----EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
H + + GA +P + R+ + KLF+GML K SE +V LF +G I++
Sbjct: 115 HALQVMGGAGTPAPRHHGTTSSLRIGPVPKDRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 174
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 175 CTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRR 234
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 235 MQQMAGQ 241
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 409 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 448
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 479
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA A+NA
Sbjct: 147 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQAAINA 205
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 206 LHGSQTMPGASSSLVVKFADTDKERTMRRM 235
>gi|341875924|gb|EGT31859.1| hypothetical protein CAEBREN_30063 [Caenorhabditis brenneri]
Length = 382
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 67/97 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLFIGML K SE +V LF+ +G + ++ +LRG+ SKGCAF+KY++ A A+
Sbjct: 25 DKKLFIGMLSKTQSEDDVRTLFAAFGELDEVTVLRGADGVSKGCAFVKYKSGFDAHMAIS 84
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADTE+ERQ RR Q+ +Q
Sbjct: 85 ALHGSQTMPGASSSLVVKYADTERERQNRRMQQMAAQ 121
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%)
Query: 343 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 393
++ GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCF
Sbjct: 331 EVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHVVSAKVFVDRATNQSKCF 381
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E + +F F +DEV +++ S+GC FV S +
Sbjct: 20 KDKMDDKKLFIGMLSKTQSEDDVRTLFAAFGELDEVTVLR-GADGVSKGCAFVKYKSGFD 78
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL-----FIGML-PKNVSEAEVSAL 122
A A++A H +T+PGASS L VKYAD E ER ++ +GML P V++ +
Sbjct: 79 AHMAISALHGSQTMPGASSSLVVKYADTERERQNRRMQQMAAQMGMLNPLLVNQVGLQ-Y 137
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAA 159
+ Y + Q L +Q ++ A+L ++ + AA
Sbjct: 138 NAAYQHVLQHQTLAAAQTSAASMAYLPLLQQQTSAAA 174
>gi|444523808|gb|ELV13628.1| CUGBP Elav-like family member 4 [Tupaia chinensis]
Length = 325
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+
Sbjct: 18 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN 77
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 78 ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+E KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 16 DEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQA 74
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 75 AINALHGSQTMPGASSSLVVKFADTDKERTMRRM 108
>gi|223995723|ref|XP_002287535.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
gi|220976651|gb|EED94978.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
Length = 253
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 63/86 (73%)
Query: 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
G +GP GANLFI+HIP +F +QE+ F FG+VLSA++ V+ TG S+ FGFVSY+S
Sbjct: 59 GSAKGPEGANLFIFHIPNDFSNQEMYALFAQFGKVLSARIMVESDTGRSRGFGFVSYDSA 118
Query: 402 ASAQNAIAMMNGCQLGGKKLKVQLKR 427
SA +AI+ +NG + GK+LKVQ K+
Sbjct: 119 RSAADAISHLNGYSVKGKRLKVQHKQ 144
>gi|402903006|ref|XP_003914376.1| PREDICTED: CUGBP Elav-like family member 4-like [Papio anubis]
Length = 500
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+
Sbjct: 166 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN 225
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 226 ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 262
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 430 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 469
Query: 405 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 470 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 500
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
+E E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 158 QESGQKGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSS 216
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 217 HAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 256
>gi|169659189|dbj|BAG12779.1| putative RNA binding protein [Sorogena stoianovitchae]
Length = 103
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 404
+GP GANLF++H+P E+ D +L F FG V+S +V DK TG SK FGFVSY++P SA
Sbjct: 2 QGPAGANLFVFHLPNEWKDHDLYGHFSEFGNVISHRVMTDKQTGRSKGFGFVSYDNPVSA 61
Query: 405 QNAIAMMNGCQLGGKKLKVQLKR 427
AI MNG Q G K+LKV +K+
Sbjct: 62 GMAITRMNGFQAGQKRLKVSIKK 84
>gi|26329793|dbj|BAC28635.1| unnamed protein product [Mus musculus]
gi|34784979|gb|AAH57083.1| Brunol6 protein [Mus musculus]
Length = 345
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALRRMQQMAGQLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYN 225
HP+ LP+G Y
Sbjct: 119 -HPA---PLPLGACGAYT 132
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMTGASSSLVVKLADTDRERALRRM 108
>gi|340709266|ref|XP_003393232.1| PREDICTED: ELAV-like protein 2-like [Bombus terrestris]
Length = 533
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 174/433 (40%), Gaps = 107/433 (24%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L V +P+ MT+ ++ ++F V+ +I+DK T S G FV ++A+K
Sbjct: 25 ESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEK 84
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+N + L + ++V YA E ++ L++ LPKN+++ ++ LF+ YG I
Sbjct: 85 AINTLNG---LRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFNPYGRII 141
Query: 131 DLQILRGSQQT--------------SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+IL + SKG F++++ + +A A++ +NG +GSS P+
Sbjct: 142 TSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTVP-KGSSEPI 200
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VK+ ANN N + P P+ Y P QA+ YG
Sbjct: 201 TVKF------------------ANNPSNNNKAIP------PLAYLAP------QATRRYG 230
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV- 295
P+ + G IP + P G A+
Sbjct: 231 ------GPIHHPTGRFRYIP-------------------------LSPLSSTGKAMLAIN 259
Query: 296 PGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIY 355
GLQ P G +L + L PG+ GSG I F+Y
Sbjct: 260 KGLQRYSPLAGDLLANSML---PGNAM---------------NGSGWCI--------FVY 293
Query: 356 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 415
++ E + L F FG V S KV D T K FGFV+ + A AI +NG
Sbjct: 294 NLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYT 353
Query: 416 LGGKKLKVQLKRD 428
LG + L+V K +
Sbjct: 354 LGNRVLQVSFKTN 366
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 335 SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
+GG+ G + NL + ++PQ E+ + F + G V S K+ DK TG S +G
Sbjct: 13 NGGSTLGQASQEESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYG 72
Query: 395 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
FV+Y P A+ AI +NG +L K +KV R
Sbjct: 73 FVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR 105
>gi|325562907|gb|ADZ31337.1| cell size RNA recognition motif 2 [synthetic construct]
Length = 103
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 88 PLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG 144
P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D+ I++ + S+G
Sbjct: 3 PIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRG 62
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
C F+K+ ++E ALAA+ A++G + M G PL++++AD ++
Sbjct: 63 CGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKR 103
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ ++E+ + E KLFV + K T ++ +F + V++V I+KD R SRGC FV
Sbjct: 9 ADGERERHGAIEH-KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFV 66
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
SR+ A A++A + G PL +++AD
Sbjct: 67 KFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 100
>gi|350425139|ref|XP_003494024.1| PREDICTED: ELAV-like protein 2-like [Bombus impatiens]
Length = 371
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 174/433 (40%), Gaps = 107/433 (24%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L V +P+ MT+ ++ ++F V+ +I+DK T S G FV ++A+K
Sbjct: 25 ESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEK 84
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+N + + + ++V YA E ++ L++ LPKN+++ ++ LF+ YG I
Sbjct: 85 AINTLNGLRL---QNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFNPYGRII 141
Query: 131 DLQILRGSQQT--------------SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+IL + SKG F++++ + +A A++ +NG +GSS P+
Sbjct: 142 TSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTVP-KGSSEPI 200
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VK+ ANN N + P P+ Y P QA+ YG
Sbjct: 201 TVKF------------------ANNPSNNNKAIP------PLAYLAP------QATRRYG 230
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV- 295
P+ + G IP + P G A+
Sbjct: 231 ------GPIHHPTGRFRYIP-------------------------LSPLSSTGKAMLAIN 259
Query: 296 PGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIY 355
GLQ P G +L + L PG+ GSG I F+Y
Sbjct: 260 KGLQRYSPLAGDLLANSML---PGNAM---------------NGSGWCI--------FVY 293
Query: 356 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 415
++ E + L F FG V S KV D T K FGFV+ + A AI +NG
Sbjct: 294 NLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYT 353
Query: 416 LGGKKLKVQLKRD 428
LG + L+V K +
Sbjct: 354 LGNRVLQVSFKTN 366
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 335 SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
+GG+ G + NL + ++PQ E+ + F + G V S K+ DK TG S +G
Sbjct: 13 NGGSTLGQASQEESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYG 72
Query: 395 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
FV+Y P A+ AI +NG +L K +KV R
Sbjct: 73 FVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR 105
>gi|298714689|emb|CBJ27614.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 473
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 64/90 (71%)
Query: 344 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 403
++GP G NLF++HIP ++ L F FG V+SA++ V+KATG S+ FGFVSY++ S
Sbjct: 155 LQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDS 214
Query: 404 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
A+ AI+ MNG Q+ K+LKVQ K+D ++ +
Sbjct: 215 AEKAISQMNGYQIEHKRLKVQHKKDKERER 244
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
LFV +P MT L +F +F V I+ +K T SRG FV +R A+KA++
Sbjct: 163 LFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAIS 220
>gi|12239369|gb|AAG49448.1|AF141345_1 LYST-interacting protein LIP9 [Homo sapiens]
Length = 213
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 65/105 (61%)
Query: 94 ADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETK 153
A G+ R + KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY +
Sbjct: 26 ACGQRXRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSH 85
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+A A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 86 AEARPPFNALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMVGQ 130
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA NA
Sbjct: 36 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEARPPFNA 94
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 95 LHGSQTMPGASSSLVVKFADTDKERTMRRM 124
>gi|429328279|gb|AFZ80039.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 525
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 62/85 (72%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GPPG+NLFI+HIP E+ +L +F FGRV+SA++ DK+TG K + FVSY++P SA
Sbjct: 422 GPPGSNLFIFHIPNEWTYNDLVRSFSQFGRVISARIATDKSTGRHKGYAFVSYDNPDSAS 481
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNK 430
A+A MNG + GK+LKV +K+ ++
Sbjct: 482 QAVANMNGFTVLGKRLKVTVKKGDE 506
>gi|47215209|emb|CAG01416.1| unnamed protein product [Tetraodon nigroviridis]
Length = 431
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+K+ + +A AA+
Sbjct: 130 DRKLFVGMLNKQQSEDDVRRLFESFGCIEECTILRGPDGNSKGCAFVKFSSHAEAQAAIS 189
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 190 ALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQ 226
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
SE+R KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 128 SEDR-KLFVGMLNKQQSEDDVRRLFESFGCIEECTILRGPDGN-SKGCAFVKFSSHAEAQ 185
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 186 AAISALHGSQTMPGASSSLVVKFADTDKERTIRRM 220
>gi|260787640|ref|XP_002588860.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
gi|229274031|gb|EEN44871.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
Length = 204
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 99 ERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQAL 157
ER+E KLF+GML K +E +V LF +GTI++ ILRG SKGCAF+K+ + +A
Sbjct: 25 ERVEDRKLFVGMLGKQQTEEDVRRLFDPFGTIEECTILRGPDGQSKGCAFVKFSSHAEAQ 84
Query: 158 AALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
AA+ ++G M G+S +VVK+ADT+KERQ R+ Q+
Sbjct: 85 AAINNLHGSQTMPGASSSIVVKFADTDKERQLRKMQQ 121
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ + + E+R KLFVG + K TE + +F F ++E I++ + S+GC FV
Sbjct: 20 TMRHAERVEDR-KLFVGMLGKQQTEEDVRRLFDPFGTIEECTILRGPDGQ-SKGCAFVKF 77
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A+N H +T+PGASS + VK+AD + ER K+
Sbjct: 78 SSHAEAQAAINNLHGSQTMPGASSSIVVKFADTDKERQLRKM 119
>gi|242003642|ref|XP_002436197.1| conserved hypothetical protein [Ixodes scapularis]
gi|215499533|gb|EEC09027.1| conserved hypothetical protein [Ixodes scapularis]
Length = 170
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 70/103 (67%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLFIGML K +E++V +FS +G+I++ +LR SKGCAF+ Y +++ A+ A++
Sbjct: 6 ERKLFIGMLAKECNESDVRVMFSPFGSIEECTVLRDGSGQSKGCAFVTYASRQCAINAIK 65
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPN 204
A+N M+G + P+VVK+ADT+KE++ +R Q+ + + N
Sbjct: 66 AMNHSQTMKGCNNPMVVKFADTQKEKEQKRQQQVMTNLWTMAN 108
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G + K E+ + MF F ++E +++D + + S+GC FV SRQ A A+ A
Sbjct: 8 KLFIGMLAKECNESDVRVMFSPFGSIEECTVLRDGSGQ-SKGCAFVTYASRQCAINAIKA 66
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHK 104
++ +T+ G ++P+ VK+AD + E+ + +
Sbjct: 67 MNHSQTMKGCNNPMVVKFADTQKEKEQKR 95
>gi|383865034|ref|XP_003707981.1| PREDICTED: ELAV-like protein 2-like [Megachile rotundata]
Length = 502
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 173/433 (39%), Gaps = 106/433 (24%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L V +P+ MT+ ++ ++F V+ +I+DK T S G FV ++A+K
Sbjct: 25 ESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRSEDAEK 84
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+N + L + ++V YA E ++ L++ LPKN+++ ++ LFS YG I
Sbjct: 85 AINTLNG---LRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGRII 141
Query: 131 DLQILRGSQQT--------------SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+IL + SKG F++++ + +A A++ +NG +GSS P+
Sbjct: 142 TSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPI 200
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VK+ ANN N + P L Y P QA+ +G
Sbjct: 201 TVKF------------------ANNPSNNNKAIPPL-----AAYLTP------QATRRFG 231
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV- 295
P+ + G IP + P G A+
Sbjct: 232 ------GPIHHPTGRFRYIP-------------------------LSPLSSTGKAMLAIN 260
Query: 296 PGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIY 355
GLQ P G +L + L PG+ GSG I F+Y
Sbjct: 261 KGLQRYSPLAGDLLANSML---PGNAM---------------NGSGWCI--------FVY 294
Query: 356 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 415
++ E + L F FG V S KV D T K FGFV+ + A AI +NG
Sbjct: 295 NLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYT 354
Query: 416 LGGKKLKVQLKRD 428
LG + L+V K +
Sbjct: 355 LGNRVLQVSFKTN 367
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%)
Query: 335 SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 394
+GG+ G + NL + ++PQ E+ + F + G V S K+ DK TG S +G
Sbjct: 13 NGGSTLGQASQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYG 72
Query: 395 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
FV+Y A+ AI +NG +L K +KV R
Sbjct: 73 FVNYHRSEDAEKAINTLNGLRLQNKTIKVSYAR 105
>gi|71034161|ref|XP_766722.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353679|gb|EAN34439.1| RNA-binding protein, putative [Theileria parva]
Length = 268
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 338 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 397
T +GG GPPGANLF++H+P + D +L F+ FG V+SA+V D A G ++ FGF+S
Sbjct: 142 TVAGGSSFGPPGANLFVFHVPANWNDLDLVEHFKHFGNVISARVQRDSA-GRNRGFGFIS 200
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKR 427
Y++P SA AI MNG +GGK LKVQLK+
Sbjct: 201 YDNPQSAVVAIKNMNGFSVGGKYLKVQLKK 230
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+G +P N SE E+ S YG + L + + + G AF+ +E+ + A A++A+
Sbjct: 9 KLFVGSIPSNTSEEELKEELSKYGQLVSLFYMPDQMKQNNGWAFVTFESNQSASNAIDAL 68
Query: 164 NGKHKMEGSSVPLVVKWA 181
NGK +G++V L V +A
Sbjct: 69 NGKIIFQGTTVGLEVVYA 86
>gi|403339634|gb|EJY69082.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1147
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 49/190 (25%)
Query: 280 YAMP-PSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPS------- 331
Y MP S F+ P GL P GML PLN P ++ P+ +N+
Sbjct: 841 YGMPMASPFLNPIMPTTTGLSIP-----GMLD--PLNMKPFNMYPSASNNTGDIMAQSQQ 893
Query: 332 -------------TSSSGGTGS-------------------GGQIEGPPGANLFIYHIPQ 359
T+++ G G+ G +GPPGANLFI+H+P
Sbjct: 894 SLSQNDHSQAGSLTNTNQGVGNQQNLSEMNHEEQMQHQAIHGQYKQGPPGANLFIFHLPN 953
Query: 360 EFGDQELGNAFQAF--GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 417
E+GD +L F +F G ++S ++ DK G SK FGFVSY++P A AI ++NG
Sbjct: 954 EWGDLDLYLFFDSFKLGNIVSVRIMTDKENGRSKGFGFVSYDNPHGATQAIKIINGKSAL 1013
Query: 418 GKKLKVQLKR 427
GK+LKV++K+
Sbjct: 1014 GKRLKVEMKK 1023
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 9/94 (9%)
Query: 87 SPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
S LQV+YADGELERL + KL++ + K ++V+ LF+ +G I++L + +
Sbjct: 592 SKLQVRYADGELERLGIVNLEKVEQSKLYVCHINKFKQVSDVNKLFTTFGDIEELYLFKD 651
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
S++ KG F+KY+T++QA+ A+ +N K +G
Sbjct: 652 SEEKFKGSCFIKYQTRKQAVKAIARLNQKGNSDG 685
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
V+LF+GQ P+ + +++ FK F + E II+DK + +GC F+ C + EA+
Sbjct: 433 VRLFIGQTPRTWDDNKVMLYFKRFGSILEAKIIRDKGDNSHKGCAFIRCMNFHEAE 488
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L + +P+++TE++L MF V I++D T S G FV + Q+AD A+
Sbjct: 26 RTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFV---NYQKADDAI 82
Query: 74 NACHNKKTLPGASSPLQVKYAD--GELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A L + ++V YA GE +R E L++ LP++V+E E++ +FS +G I
Sbjct: 83 RAIQTLNGLQIQNKRIKVSYARPPGE-DRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQ 141
Query: 132 LQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ +L+ +G AF++++ +E+ALAA+E +NG G + P+ VK A+ +++A
Sbjct: 142 MNLLKDKITGMPRGVAFVRFDKREEALAAIEHLNGTIP-HGRTNPISVKIAEEHGKQKA 199
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 409
NL I ++PQ + EL F G V + K+ D TG S FGFV+Y+ A AI
Sbjct: 27 TNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRAIQ 86
Query: 410 MMNGCQLGGKKLKVQLKR----DNKQNKPY 435
+NG Q+ K++KV R D K+ Y
Sbjct: 87 TLNGLQIQNKRIKVSYARPPGEDRKETNLY 116
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ L+V +P+ +TE +L +F + ++N++KDK T RG FV R+EA
Sbjct: 109 DRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEAL 168
Query: 71 KAVNACHNKKTLP-GASSPLQVKYAD 95
A+ H T+P G ++P+ VK A+
Sbjct: 169 AAIE--HLNGTIPHGRTNPISVKIAE 192
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 347 PPG-----ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 401
PPG NL++ ++P++ + EL N F A G ++ + DK TG+ + FV ++
Sbjct: 105 PPGEDRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKR 164
Query: 402 ASAQNAIAMMNGCQLGGKKLKVQLK 426
A AI +NG G+ + +K
Sbjct: 165 EEALAAIEHLNGTIPHGRTNPISVK 189
>gi|290986619|ref|XP_002676021.1| hypothetical protein NAEGRDRAFT_4931 [Naegleria gruberi]
gi|284089621|gb|EFC43277.1| hypothetical protein NAEGRDRAFT_4931 [Naegleria gruberi]
Length = 141
Score = 93.6 bits (231), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
Query: 28 EAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87
E L +F +F V E+ +I+D+ T SRGC FV S+Q+AD + + + LP
Sbjct: 1 EDNLYPLFSQFGPVAEIVVIRDRFTFKSRGCAFVSFRSKQDADTCIRELNQRLKLP---- 56
Query: 88 PLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
P+ + A L L E+KLFI +PKNV+E E+S LF +G I D+ +L
Sbjct: 57 PVNLTIASNFLSCLNIDKYEIGVPHPENKLFIRNIPKNVTEDELSTLFESFGEILDVVVL 116
Query: 136 RGSQQTSKGCAFLKYETKEQA 156
R + TSKGC F+K+ E A
Sbjct: 117 RTTIHTSKGCGFIKFTNSESA 137
Score = 40.4 bits (93), Expect = 1.8, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
KLF+ +PK++TE +L +F+ F + +V +++ T S+GC F+ + + AD +
Sbjct: 85 KLFIRNIPKNVTEDELSTLFESFGEILDVVVLR-TTIHTSKGCGFIKFTNSESADMVI 141
>gi|442762665|gb|JAA73491.1| Putative rna-binding protein cugbp1/bruno rrm superfamily, partial
[Ixodes ricinus]
Length = 110
Score = 93.6 bits (231), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
S +++ + +K+FVGQ+P+ E L MF++F V ++N+++DK T SRGCCFV
Sbjct: 3 SPGKEQPDPDAIKMFVGQIPRSWDENDLKKMFEDFGPVYQINVLRDKATGTSRGCCFVTF 62
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
+R+ A A N HN KTLPG P+Q+K AD E R E KLFIG
Sbjct: 63 YTRKSALDAQNDLHNMKTLPGMHHPIQMKPADSE-NRNERKLFIG 106
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEA 162
K+F+G +P++ E ++ +F +G + + +LR + TS+GC F+ + T++ AL A
Sbjct: 15 KMFVGQIPRSWDENDLKKMFEDFGPVYQINVLRDKATGTSRGCCFVTFYTRKSALDAQND 74
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQAR 190
++ + G P+ +K AD+E + +
Sbjct: 75 LHNMKTLPGMHHPIQMKPADSENRNERK 102
Score = 43.9 bits (102), Expect = 0.15, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 341 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK--CF-GFVS 397
G + P +F+ IP+ + + +L F+ FG V V DKATG S+ CF F +
Sbjct: 5 GKEQPDPDAIKMFVGQIPRSWDENDLKKMFEDFGPVYQINVLRDKATGTSRGCCFVTFYT 64
Query: 398 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 433
+S AQN + M L G +Q+K + +N+
Sbjct: 65 RKSALDAQNDLHNMK--TLPGMHHPIQMKPADSENR 98
>gi|402593619|gb|EJW87546.1| hypothetical protein WUBG_01540 [Wuchereria bancrofti]
Length = 149
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 24 DTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAIRC 83
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V +LF+ +
Sbjct: 84 QAALHDQKTLPGMNRAMQVKPADNESRPDSPKNAEERKLFVGMLSKQHNEDDVRSLFAPF 143
Query: 127 GTIKDL 132
G I ++
Sbjct: 144 GVIDEV 149
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+N+ E ++ LF +G I + IL+ KGCAFL Y ++ A+ A
Sbjct: 27 KLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAIRCQAA 86
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ + + G + + VK AD E
Sbjct: 87 LHDQKTLPGMNRAMQVKPADNE 108
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 327 NSNPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 385
N + S S T S G ++ LF+ IP+ +++L + F+ FG++ + DK
Sbjct: 2 NGDSVMSRSSSTDSNGFPVKDADTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDK 61
Query: 386 ATGVSKCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 434
TG+ K F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 62 YTGLHKGCAFLTYCHRDSAIRCQAALHDQKTLPGMNRAMQVKPADNESRP 111
>gi|405967996|gb|EKC33105.1| CUG-BP- and ETR-3-like factor 4 [Crassostrea gigas]
Length = 349
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 62/93 (66%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF +G I++ ILR SKGCAF+K+ +A +A+
Sbjct: 37 DRKLFVGMLNKQQTEDDVRQLFQPFGNIEECTILRDQNGNSKGCAFVKFSGHNEAQSAIN 96
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
A++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 97 ALHGSQTMPGASSSLVVKFADTEKERQLRRMQQ 129
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
+A K SS+E KLFVG + K TE + +F+ F ++E I++D+ S+GC F
Sbjct: 24 VAWQTTNKLSSDEDRKLFVGMLNKQQTEDDVRQLFQPFGNIEECTILRDQNGN-SKGCAF 82
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V EA A+NA H +T+PGASS L VK+AD E ER
Sbjct: 83 VKFSGHNEAQSAINALHGSQTMPGASSSLVVKFADTEKER 122
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 394 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 435
GFVS+++P SAQ AI MNG Q+G K+LKVQLKR QN+PY
Sbjct: 308 GFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDQNRPY 349
>gi|84997698|ref|XP_953570.1| hypothetical protein [Theileria annulata]
gi|65304567|emb|CAI72892.1| hypothetical protein, conserved [Theileria annulata]
Length = 295
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 340 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 399
+GG GPPGANLF++H+P + D +L F+ FG V+SA+V D A G ++ FGF+SY+
Sbjct: 166 AGGSSFGPPGANLFVFHVPANWNDLDLVEHFKHFGNVISARVQRDSA-GRNRGFGFISYD 224
Query: 400 SPASAQNAIAMMNGCQLGGKKLKVQLKR 427
+P SA AI MNG +GGK LKVQLK+
Sbjct: 225 NPQSAVVAIKNMNGFSVGGKYLKVQLKK 252
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+G +P NVSE E+ S YG + L + + + G AF+ +E+ + A A++A+
Sbjct: 10 KLFVGSIPTNVSEEELKEELSKYGQLVSLFYMPDQMKQNNGWAFVTFESNQSASNAIDAL 69
Query: 164 NGKHKMEGS 172
NGK E S
Sbjct: 70 NGKIVFEVS 78
>gi|157108557|ref|XP_001650283.1| hypothetical protein AaeL_AAEL000691 [Aedes aegypti]
gi|108884043|gb|EAT48268.1| AAEL000691-PA [Aedes aegypti]
Length = 201
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+K+FVGQVP+ M E QL MF+EF V ++N+++DKT+ S+GCCFV +R+ A KA +
Sbjct: 107 IKMFVGQVPRSMDEQQLKEMFEEFGRVHQINVLRDKTSGLSKGCCFVTFYTRKAALKAQD 166
Query: 75 ACHNKKTLPGASSPLQVKYADGE 97
A HN KTL G P+Q+K AD E
Sbjct: 167 ALHNIKTLVGMHHPIQMKPADSE 189
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
K+F+G +P+++ E ++ +F +G + + +LR SKGC F+ + T++ AL A +A
Sbjct: 108 KMFVGQVPRSMDEQQLKEMFEEFGRVHQINVLRDKTSGLSKGCCFVTFYTRKAALKAQDA 167
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ + G P+ +K AD+E
Sbjct: 168 LHNIKTLVGMHHPIQMKPADSE 189
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 406
P +F+ +P+ +Q+L F+ FGRV V DK +G+SK FV++ + +A
Sbjct: 104 PDYIKMFVGQVPRSMDEQQLKEMFEEFGRVHQINVLRDKTSGLSKGCCFVTFYTRKAALK 163
Query: 407 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 433
A A+ N L G +Q+K + +N+
Sbjct: 164 AQDALHNIKTLVGMHHPIQMKPADSENR 191
>gi|156086340|ref|XP_001610579.1| RNA binding motif containing protein [Babesia bovis T2Bo]
gi|154797832|gb|EDO07011.1| RNA binding motif containing protein [Babesia bovis]
Length = 278
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GPPG+NLF++H+P E+ D +L FQ+FG ++SA+V +D G ++ +GFVSY++P SA
Sbjct: 162 GPPGSNLFVFHLPPEWSDSDLLLHFQSFGTIVSARVQLD-TVGRNRGYGFVSYDNPTSAL 220
Query: 406 NAIAMMNGCQLGGKKLKVQLKRDNKQ 431
AI MNG + GK LKVQLKR +Q
Sbjct: 221 TAIKNMNGYSVCGKYLKVQLKRGEEQ 246
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
K+FIG +P +V E ++ + +G +K + + S G AF Y +AA+ AI
Sbjct: 14 KIFIGCIPGDVLEDQLRWELAKFGNLKSIFYMPDLGHESMGWAFATYNDHYSGIAAVNAI 73
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 203
N + GS+VP ++ R A+ K + N P
Sbjct: 74 NDELFFAGSNVPCKAQFV---TPRSAQEYTKLKGNTRNWP 110
>gi|17532863|ref|NP_496057.1| Protein EXC-7 [Caenorhabditis elegans]
gi|3876753|emb|CAA85327.1| Protein EXC-7 [Caenorhabditis elegans]
Length = 456
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 189/438 (43%), Gaps = 50/438 (11%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L + +P+ MT+ ++ ++F ++ +++DK T S G FV ++A +
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
AV++ + + + ++V YA ++++ L++ +PK+++ E+ ++F +G I
Sbjct: 99 AVSSFNGLRL---QNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQII 155
Query: 131 DLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA-------- 181
+IL + SKG F++++ K++A A++ +NG G S + VK+A
Sbjct: 156 TSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIP-SGCSEQITVKFANNPASNNP 214
Query: 182 -----DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
D E +QA S + A + + G PM +AP + Y Y G+
Sbjct: 215 KGLLSDLEAVQQAATTLVPLS---TILGAPTLRATAGGIGPMHHAPITSKYRYSPMGAIT 271
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRG--------ASPDLSSNMGPRNYAMPPSGFV 288
+ + + ++Q NA+ G A PD ++++
Sbjct: 272 AVSQPTATLPADYLTTSALLQMSQLNALAGLNPFATATAVPDFTASLIAHQQQQHAVAQQ 331
Query: 289 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 348
+ A P P G + + ++S +VA + P + ++G
Sbjct: 332 HAAQTASP------PATNGQVAGLAAHAQLSALSASVAATLPPSDTAGYC---------- 375
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
LF+Y++ + D L F FG +++ K+ D T K + FVS + A NA+
Sbjct: 376 ---LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAYNAM 431
Query: 409 AMMNGCQLGGKKLKVQLK 426
+NG L GK L+V K
Sbjct: 432 LSLNGTNLAGKTLQVVFK 449
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
G NL I ++PQ +E+ + F + G + S K+ DK TG S +GFV+Y A
Sbjct: 38 GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97
Query: 406 NAIAMMNGCQLGGKKLKVQLKR-DNKQNK 433
A++ NG +L K +KV R N Q K
Sbjct: 98 RAVSSFNGLRLQNKTIKVSYARPSNDQIK 126
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 408
G+NL++ IP+ EL + F+ FG+++++++ D TG+SK GFV ++ A AI
Sbjct: 127 GSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAI 186
Query: 409 AMMNGCQLGG--KKLKVQLKRDNKQNKP 434
+NG G +++ V+ + N P
Sbjct: 187 KTLNGSIPSGCSEQITVKFANNPASNNP 214
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S +++K L+V +PK MT +L ++F+ F + I+ D T S+G FV +
Sbjct: 121 SNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKD 180
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD 95
EAD A+ N G S + VK+A+
Sbjct: 181 EADVAIKTL-NGSIPSGCSEQITVKFAN 207
>gi|221053434|ref|XP_002258091.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193807924|emb|CAQ38628.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 292
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 405
GPPGAN+F++H+P + D EL FQ FG VLSA++ D ++G +K +GFVS+ +P SA
Sbjct: 151 GPPGANVFVFHVPSHWTDMELYQHFQHFGYVLSARIQRD-SSGRNKGYGFVSFNNPESAM 209
Query: 406 NAIAMMNGCQLGGKKLKVQLKR 427
NAI M+G + GK LKVQLK+
Sbjct: 210 NAIKGMHGFYVSGKHLKVQLKK 231
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
K+FIG +PK+V+E E+ S YG I + + + Q +G AF+ Y+ + +A A+EA+
Sbjct: 8 KIFIGSIPKDVTEEELKTEASKYGVITQVYYVPATVQNPRGWAFITYKERSEAYKAIEAL 67
Query: 164 NGKHKMEGSSVPLVVKWA 181
+ K S PL V++A
Sbjct: 68 DYKSIFPNSQRPLDVRFA 85
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
S+ K+F+G +PK +TE +L ++ ++ +V + T + RG F+ R EA
Sbjct: 2 SAANSTKIFIGSIPKDVTEEELKTEASKYGVITQVYYV-PATVQNPRGWAFITYKERSEA 60
Query: 70 DKAVNACHNKKTLPGASSPLQVKYA 94
KA+ A K P + PL V++A
Sbjct: 61 YKAIEALDYKSIFPNSQRPLDVRFA 85
>gi|221483935|gb|EEE22239.1| RNA binding protein, putative [Toxoplasma gondii GT1]
gi|221505217|gb|EEE30871.1| RNA binding protein, putative [Toxoplasma gondii VEG]
Length = 837
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 64/93 (68%)
Query: 339 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 398
G G Q GPPGAN+FI+HIP E+ + +L F +G V+SA++ D+ +G ++ FGFVS+
Sbjct: 481 GIGSQAHGPPGANVFIFHIPNEWSEHDLLTHFSVYGPVVSARIASDRLSGRNRGFGFVSF 540
Query: 399 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 431
+ +A A+ MNG Q+ GK+LKVQ+K+ +Q
Sbjct: 541 ANGQAAAAAVTAMNGFQVNGKRLKVQIKKGEEQ 573
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,297,416,838
Number of Sequences: 23463169
Number of extensions: 338139955
Number of successful extensions: 972458
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14314
Number of HSP's successfully gapped in prelim test: 10026
Number of HSP's that attempted gapping in prelim test: 880260
Number of HSP's gapped (non-prelim): 82627
length of query: 435
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 290
effective length of database: 8,957,035,862
effective search space: 2597540399980
effective search space used: 2597540399980
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)