Query 013840
Match_columns 435
No_of_seqs 161 out of 2254
Neff 10.1
Searched_HMMs 13730
Date Mon Mar 25 18:05:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013840.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013840hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 1.9E-29 1.4E-33 214.4 18.5 172 103-432 7-179 (183)
2 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 7.3E-29 5.3E-33 210.7 18.7 171 10-188 2-180 (183)
3 d2cpza1 d.58.7.1 (A:383-484) C 99.9 1.3E-23 9.7E-28 158.5 12.7 89 345-433 14-102 (102)
4 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 2.3E-23 1.7E-27 154.3 13.2 88 348-435 6-93 (93)
5 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 5.1E-23 3.7E-27 152.5 10.9 86 347-432 7-92 (93)
6 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 6.8E-23 4.9E-27 148.5 10.8 80 349-428 2-81 (82)
7 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 1.2E-22 8.8E-27 148.9 12.0 82 348-429 6-87 (88)
8 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 1.9E-22 1.4E-26 148.6 11.8 83 348-430 7-89 (90)
9 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 1.8E-22 1.3E-26 145.2 11.3 78 351-428 2-79 (80)
10 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 1.2E-22 9E-27 149.3 9.5 85 348-432 4-88 (89)
11 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 4.6E-22 3.3E-26 144.2 12.3 79 350-428 3-81 (82)
12 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 3E-21 2.2E-25 154.8 16.7 85 348-432 41-125 (139)
13 d2cqca1 d.58.7.1 (A:109-191) A 99.9 8.9E-22 6.5E-26 142.7 11.8 77 347-423 7-83 (83)
14 d2cqga1 d.58.7.1 (A:96-185) TA 99.9 1.2E-21 8.7E-26 143.5 11.9 83 348-432 7-89 (90)
15 d1whwa_ d.58.7.1 (A:) Probable 99.9 1.1E-21 8.1E-26 147.3 12.1 84 348-431 7-90 (99)
16 d2u2fa_ d.58.7.1 (A:) Splicing 99.9 4.5E-22 3.3E-26 144.6 9.1 82 350-431 2-83 (85)
17 d1fxla2 d.58.7.1 (A:119-203) H 99.9 9.9E-22 7.2E-26 142.9 10.9 79 348-426 5-85 (85)
18 d1b7fa2 d.58.7.1 (A:205-289) S 99.9 1.4E-21 9.9E-26 142.4 11.3 79 348-426 5-85 (85)
19 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 2.7E-21 2E-25 142.3 12.4 84 347-432 6-89 (90)
20 d1no8a_ d.58.7.1 (A:) Nuclear 99.9 1.3E-21 9.3E-26 139.8 10.2 77 351-428 2-78 (78)
21 d2cpha1 d.58.7.1 (A:454-547) P 99.9 1.3E-21 9.4E-26 145.1 10.5 84 348-431 7-92 (94)
22 d2cqda1 d.58.7.1 (A:1-103) RNA 99.9 2.3E-21 1.7E-25 146.3 12.1 84 348-432 9-92 (103)
23 d2cq3a1 d.58.7.1 (A:110-202) R 99.9 4.6E-21 3.3E-25 141.9 13.3 83 347-431 9-91 (93)
24 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 9.7E-22 7.1E-26 141.9 8.9 80 349-428 1-80 (81)
25 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 1.1E-21 7.8E-26 144.8 9.1 86 348-433 4-89 (90)
26 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 1.1E-21 8.2E-26 142.3 9.0 81 352-432 1-82 (83)
27 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 4E-21 2.9E-25 139.1 11.7 80 348-428 5-84 (84)
28 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 4E-21 2.9E-25 140.0 11.2 79 352-430 1-82 (85)
29 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 3E-21 2.2E-25 146.4 9.4 82 349-430 8-89 (104)
30 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 3.7E-21 2.7E-25 141.3 9.5 82 348-431 7-88 (89)
31 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 9.3E-22 6.8E-26 139.7 6.0 76 350-426 1-76 (77)
32 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 1.6E-21 1.2E-25 146.2 7.1 81 349-430 18-98 (101)
33 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 7.8E-21 5.7E-25 142.8 10.6 84 348-432 19-102 (103)
34 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 4.8E-21 3.5E-25 139.6 8.4 81 348-429 3-85 (86)
35 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 1.5E-20 1.1E-24 141.2 11.1 85 347-431 6-96 (98)
36 d2cpea1 d.58.7.1 (A:353-453) R 99.8 1.3E-20 9.1E-25 142.4 10.2 87 345-431 4-98 (101)
37 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 7.3E-21 5.3E-25 134.6 8.1 75 351-426 1-75 (75)
38 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 2.5E-21 1.8E-25 142.4 5.1 80 348-429 12-91 (91)
39 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 5E-20 3.7E-24 136.9 12.2 81 347-430 12-92 (95)
40 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 2.4E-20 1.7E-24 138.6 10.2 78 347-430 16-93 (96)
41 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 5.8E-20 4.2E-24 131.8 11.8 76 350-426 3-78 (79)
42 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 1.8E-20 1.3E-24 136.8 9.2 80 347-426 7-86 (86)
43 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 3.5E-21 2.5E-25 145.7 5.3 85 348-432 17-101 (102)
44 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 2.9E-20 2.1E-24 134.4 9.6 79 345-428 4-83 (83)
45 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 1.3E-19 9.8E-24 131.2 11.8 79 348-428 5-83 (85)
46 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 5.6E-20 4.1E-24 141.9 10.3 79 348-429 6-84 (114)
47 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 1.4E-20 1E-24 132.6 5.7 75 351-426 1-75 (75)
48 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 1.7E-19 1.2E-23 136.7 11.9 83 348-432 14-97 (104)
49 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 1.2E-19 8.8E-24 135.1 10.7 81 348-433 15-95 (96)
50 d2msta_ d.58.7.1 (A:) Neural R 99.8 3.6E-20 2.6E-24 131.6 7.4 75 351-426 1-75 (75)
51 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 6.8E-20 5E-24 137.7 9.2 80 348-428 17-96 (101)
52 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 1.7E-19 1.3E-23 134.3 11.3 77 348-432 14-91 (98)
53 d1fxla2 d.58.7.1 (A:119-203) H 99.8 2.2E-19 1.6E-23 130.3 11.5 82 12-94 4-85 (85)
54 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 2.4E-19 1.8E-23 135.6 11.7 85 346-431 12-96 (104)
55 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 2.8E-19 2.1E-23 129.9 11.6 83 11-94 3-85 (85)
56 d1weza_ d.58.7.1 (A:) Heteroge 99.8 1.1E-19 8.1E-24 136.8 9.4 85 345-432 11-95 (102)
57 d2adca1 d.58.7.1 (A:335-443) P 99.8 1.2E-19 8.5E-24 139.0 9.1 81 349-434 2-83 (109)
58 d2adca2 d.58.7.1 (A:444-531) P 99.8 1.9E-19 1.4E-23 131.8 9.8 79 347-429 8-87 (88)
59 d2cpia1 d.58.7.1 (A:101-189) E 99.8 1.1E-19 8.3E-24 132.9 8.2 77 348-424 7-89 (89)
60 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 1.6E-19 1.2E-23 134.5 9.0 84 349-432 1-88 (96)
61 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 3.5E-19 2.6E-23 131.5 10.6 84 12-98 7-90 (93)
62 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 2.2E-19 1.6E-23 129.7 9.1 80 14-96 2-81 (82)
63 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 1.6E-19 1.2E-23 129.1 8.1 74 348-429 4-77 (79)
64 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 1.5E-19 1.1E-23 133.0 8.1 81 348-431 2-86 (91)
65 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 4.8E-19 3.5E-23 129.4 10.2 84 10-96 3-86 (88)
66 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 6.2E-19 4.5E-23 124.3 10.4 74 350-426 1-74 (75)
67 d2cpda1 d.58.7.1 (A:223-308) A 99.8 8.4E-19 6.1E-23 127.7 11.3 78 348-431 7-84 (86)
68 d2cqca1 d.58.7.1 (A:109-191) A 99.8 4.8E-19 3.5E-23 128.1 9.6 80 8-90 3-82 (83)
69 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 1.9E-19 1.4E-23 128.9 7.3 77 350-432 2-79 (80)
70 d2cpja1 d.58.7.1 (A:65-150) No 99.8 2.7E-19 2E-23 129.9 8.1 77 348-430 7-83 (86)
71 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 5.7E-19 4.2E-23 129.1 9.9 85 10-99 4-88 (90)
72 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 8.8E-20 6.4E-24 128.2 5.2 71 352-422 1-71 (72)
73 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 2.8E-19 2E-23 131.0 7.8 84 12-98 3-86 (89)
74 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 8.6E-19 6.2E-23 129.4 10.4 83 11-96 4-86 (93)
75 d1whxa_ d.58.7.1 (A:) Probable 99.8 2.5E-19 1.8E-23 137.7 7.7 78 348-431 9-86 (111)
76 d2cpza1 d.58.7.1 (A:383-484) C 99.8 9.3E-19 6.8E-23 131.6 10.6 89 8-99 12-100 (102)
77 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 5.7E-19 4.1E-23 129.7 8.9 84 11-97 5-88 (90)
78 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 7.5E-19 5.5E-23 130.8 9.6 77 348-431 14-90 (98)
79 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 1.2E-18 8.4E-23 125.9 10.2 80 14-96 2-81 (82)
80 d1whya_ d.58.7.1 (A:) Putative 99.8 1.8E-18 1.3E-22 128.8 11.4 79 347-431 15-95 (97)
81 d1wg1a_ d.58.7.1 (A:) Probable 99.8 9.2E-19 6.7E-23 127.7 9.5 77 348-431 4-80 (88)
82 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 7.6E-19 5.6E-23 125.9 8.9 77 16-95 2-78 (80)
83 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 2.3E-18 1.7E-22 130.0 12.0 84 345-434 11-96 (104)
84 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 1.9E-18 1.4E-22 121.8 10.1 71 352-429 1-71 (75)
85 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 2.4E-18 1.8E-22 125.7 10.9 80 345-430 4-85 (88)
86 d2cpha1 d.58.7.1 (A:454-547) P 99.8 2.5E-18 1.8E-22 127.1 10.9 85 11-98 5-91 (94)
87 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 1.4E-18 1E-22 125.9 9.2 80 15-97 2-81 (85)
88 d2adba1 d.58.7.1 (A:177-284) P 99.8 1.5E-18 1.1E-22 132.1 9.6 81 348-432 6-88 (108)
89 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 1.1E-18 7.8E-23 125.6 8.3 80 14-96 1-80 (81)
90 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 1E-18 7.3E-23 132.3 8.3 84 11-97 5-88 (104)
91 d1whwa_ d.58.7.1 (A:) Probable 99.7 2.5E-18 1.8E-22 128.7 10.0 86 11-99 5-90 (99)
92 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.7 7.9E-19 5.8E-23 128.2 7.0 78 348-432 4-81 (88)
93 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 2.9E-18 2.1E-22 126.0 10.0 84 12-98 3-86 (90)
94 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 1.2E-18 8.6E-23 123.4 7.3 76 15-94 1-76 (77)
95 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.7 4.5E-18 3.3E-22 124.8 10.4 84 10-98 4-87 (90)
96 d2cqda1 d.58.7.1 (A:1-103) RNA 99.7 2.7E-18 1.9E-22 129.3 9.4 86 8-97 4-89 (103)
97 d2cpya1 d.58.7.1 (A:536-638) R 99.7 9.4E-19 6.9E-23 132.1 6.9 80 348-428 7-86 (103)
98 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.7 4.2E-18 3.1E-22 122.9 10.0 81 10-94 2-82 (84)
99 d2cq4a1 d.58.7.1 (A:132-232) R 99.7 8.9E-19 6.5E-23 131.0 6.3 85 10-98 14-98 (101)
100 d3begb1 d.58.7.1 (B:121-207) S 99.7 5.1E-19 3.7E-23 128.9 4.2 73 351-430 2-74 (87)
101 d1wela1 d.58.7.1 (A:412-523) R 99.7 2.6E-18 1.9E-22 131.5 7.8 80 348-428 17-96 (112)
102 d2cq3a1 d.58.7.1 (A:110-202) R 99.7 1.2E-17 8.8E-22 123.2 11.2 87 6-97 3-89 (93)
103 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.7 5.9E-18 4.3E-22 135.3 10.0 87 10-99 38-124 (139)
104 d1hd0a_ d.58.7.1 (A:) Heteroge 99.7 8.9E-18 6.5E-22 118.4 9.5 74 16-93 1-74 (75)
105 d1x4ba1 d.58.7.1 (A:8-110) Het 99.7 3.4E-18 2.5E-22 128.2 7.5 86 10-99 16-101 (103)
106 d1no8a_ d.58.7.1 (A:) Nuclear 99.7 8.5E-18 6.2E-22 119.6 9.2 76 16-95 2-77 (78)
107 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 5.7E-18 4.2E-22 126.3 8.5 78 347-430 16-96 (99)
108 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.7 2.3E-17 1.7E-21 123.5 11.5 88 11-98 5-95 (98)
109 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.7 5.4E-18 3.9E-22 122.5 7.7 79 17-98 1-80 (83)
110 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 1.2E-17 8.9E-22 121.7 9.1 78 347-430 6-86 (89)
111 d2cpfa1 d.58.7.1 (A:362-446) P 99.7 1.3E-17 9.5E-22 121.1 8.7 78 17-97 1-81 (85)
112 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 7E-18 5.1E-22 118.5 6.8 74 16-93 1-74 (75)
113 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.7 2.9E-17 2.1E-21 123.1 10.4 85 8-96 12-96 (101)
114 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.7 4.7E-17 3.4E-21 117.3 10.7 80 9-95 3-82 (83)
115 d1cvja2 d.58.7.1 (A:91-179) Po 99.7 1.4E-17 1E-21 121.8 7.5 82 13-99 7-88 (89)
116 d1weya_ d.58.7.1 (A:) Calcipre 99.7 8.7E-18 6.3E-22 126.1 6.3 80 348-433 4-88 (104)
117 d2f9da1 d.58.7.1 (A:12-125) Pr 99.7 2.6E-17 1.9E-21 126.7 8.7 106 10-128 3-108 (114)
118 d2cpea1 d.58.7.1 (A:353-453) R 99.7 4.4E-17 3.2E-21 122.6 9.5 88 8-98 2-97 (101)
119 d2cpxa1 d.58.7.1 (A:291-392) R 99.7 1.2E-17 9.1E-22 125.8 6.1 87 10-99 14-100 (102)
120 d2disa1 d.58.7.1 (A:8-103) Hyp 99.7 4.8E-17 3.5E-21 120.8 9.0 86 14-100 1-88 (96)
121 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 6.4E-17 4.7E-21 115.6 9.3 77 14-94 2-78 (79)
122 d2msta_ d.58.7.1 (A:) Neural R 99.7 6.2E-17 4.5E-21 114.5 8.6 75 16-94 1-75 (75)
123 d2adca2 d.58.7.1 (A:444-531) P 99.7 2.1E-16 1.5E-20 115.3 11.4 80 11-96 7-86 (88)
124 d1zh5a2 d.58.7.1 (A:105-189) L 99.7 3.8E-17 2.7E-21 118.1 7.1 80 11-95 3-82 (85)
125 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 3.1E-17 2.3E-21 119.0 6.4 82 12-97 2-85 (86)
126 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.7 5.9E-17 4.3E-21 113.5 6.7 65 17-81 1-65 (72)
127 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.7 1.5E-17 1.1E-21 121.9 3.2 85 7-96 6-90 (91)
128 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=1.9e-29 Score=214.37 Aligned_cols=172 Identities=22% Similarity=0.408 Sum_probs=142.2
Q ss_pred ceEEEecCCCCCCHHHHHHhhhccCCeeEEEEecCC-CCCcccEEEEEeCCHHHHHHHHHHHcCCCcCCCCcceEEEEec
Q 013840 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181 (435)
Q Consensus 103 ~~l~v~~lp~~~t~~~l~~~f~~~g~i~~v~~~~~~-~~~~~g~afV~f~~~e~a~~a~~~l~~~~~~~g~~~~l~v~~a 181 (435)
++|||+|||+++++++|+++|+.||.|.++.+..+. ++.++|+|||+|.+.++|.+|+..+++. +.++. +.+.+.
T Consensus 7 r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~--~~~~~--~~~~~~ 82 (183)
T d1u1qa_ 7 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHK--VDGRV--VEPKRA 82 (183)
T ss_dssp HEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCE--ETTEE--CEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCc--ccccc--hhhhhh
Confidence 689999999999999999999999999999998775 7888999999999999999999865542 33333 333332
Q ss_pred CCHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCCCCCCCCCCCCCccCCCCcCccccCCCCCCCCCCccCcCCCCCCC
Q 013840 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG 261 (435)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (435)
.......
T Consensus 83 ~~~~~~~------------------------------------------------------------------------- 89 (183)
T d1u1qa_ 83 VSREDSQ------------------------------------------------------------------------- 89 (183)
T ss_dssp CCTTGGG-------------------------------------------------------------------------
T ss_pred hhccccc-------------------------------------------------------------------------
Confidence 2210000
Q ss_pred CCCcCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCC
Q 013840 262 NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG 341 (435)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (435)
T Consensus 90 -------------------------------------------------------------------------------- 89 (183)
T d1u1qa_ 90 -------------------------------------------------------------------------------- 89 (183)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccCCCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEE
Q 013840 342 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 421 (435)
Q Consensus 342 ~~~~~~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i 421 (435)
........++|||+|||..+|+++|+++|+.||.|..+.|+.+..+|.++|||||+|.++++|.+|++ +++..+.|++|
T Consensus 90 ~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i 168 (183)
T d1u1qa_ 90 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNC 168 (183)
T ss_dssp STTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEE
T ss_pred ccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEE
Confidence 00011145789999999999999999999999999999999998889999999999999999999997 68999999999
Q ss_pred EEEEccCCcCC
Q 013840 422 KVQLKRDNKQN 432 (435)
Q Consensus 422 ~v~~a~~~~~~ 432 (435)
+|++|.+|++.
T Consensus 169 ~V~~A~~k~e~ 179 (183)
T d1u1qa_ 169 EVRKALSKQEM 179 (183)
T ss_dssp EEEECCCHHHH
T ss_pred EEEecCCcccc
Confidence 99999887643
No 2
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=7.3e-29 Score=210.71 Aligned_cols=171 Identities=23% Similarity=0.390 Sum_probs=142.0
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
++...++|||+|||+++|+++|+++|++||.|.++.++.+..++.++|+|||+|.+.++|.+|+..++.. + .. +.+
T Consensus 2 ep~~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~-~-~~--~~~ 77 (183)
T d1u1qa_ 2 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHK-V-DG--RVV 77 (183)
T ss_dssp CCHHHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCE-E-TT--EEC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCc-c-cc--cch
Confidence 4456689999999999999999999999999999999999989999999999999999999999875443 2 22 333
Q ss_pred eeeccCchh-------ccccceEEEecCCCCCCHHHHHHhhhccCCeeEEEEecCC-CCCcccEEEEEeCCHHHHHHHHH
Q 013840 90 QVKYADGEL-------ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALE 161 (435)
Q Consensus 90 ~~~~~~~~~-------~~~~~~l~v~~lp~~~t~~~l~~~f~~~g~i~~v~~~~~~-~~~~~g~afV~f~~~e~a~~a~~ 161 (435)
.+....... ....++|+|+|||..+++++|+++|+.||.|..+.+..+. ++.++|+|||+|.+.++|.+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~ 157 (183)
T d1u1qa_ 78 EPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI 157 (183)
T ss_dssp EEEECCCTTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT
T ss_pred hhhhhhhcccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH
Confidence 333322111 2225789999999999999999999999999999998875 68899999999999999999997
Q ss_pred HHcCCCcCCCCcceEEEEecCCHHHHH
Q 013840 162 AINGKHKMEGSSVPLVVKWADTEKERQ 188 (435)
Q Consensus 162 ~l~~~~~~~g~~~~l~v~~a~~~~~~~ 188 (435)
+++.. ++|+. |.|.++.++.++.
T Consensus 158 -~~~~~-~~G~~--i~V~~A~~k~e~~ 180 (183)
T d1u1qa_ 158 -QKYHT-VNGHN--CEVRKALSKQEMA 180 (183)
T ss_dssp -SSCEE-ETTEE--EEEEECCCHHHHH
T ss_pred -hCCCe-ECCEE--EEEEecCCccccc
Confidence 57654 77775 8889998876554
No 3
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.3e-23 Score=158.53 Aligned_cols=89 Identities=67% Similarity=1.095 Sum_probs=84.2
Q ss_pred cCCCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEE
Q 013840 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 424 (435)
Q Consensus 345 ~~~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~ 424 (435)
..+++++|||+|||.++|+++|+++|+.||.|.++.++.++.+|.++|||||+|.++++|.+|++.|||..|+|++|+|+
T Consensus 14 ~~p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~ 93 (102)
T d2cpza1 14 EGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQ 93 (102)
T ss_dssp CCSTTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 44567899999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred EccCCcCCC
Q 013840 425 LKRDNKQNK 433 (435)
Q Consensus 425 ~a~~~~~~~ 433 (435)
||+.+.+.|
T Consensus 94 ~a~~k~~~k 102 (102)
T d2cpza1 94 LKRSKNDSK 102 (102)
T ss_dssp CCCCSCCCC
T ss_pred EeCCCCCCC
Confidence 999998754
No 4
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=2.3e-23 Score=154.34 Aligned_cols=88 Identities=22% Similarity=0.351 Sum_probs=84.7
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
.+++|||+|||.++|+++|+++|+.||+|.+|.|+.++.+|.++|||||+|.+.++|..|++.|||..+.|+.|+|+|++
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~ 85 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDA 85 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCC
Q 013840 428 DNKQNKPY 435 (435)
Q Consensus 428 ~~~~~~~~ 435 (435)
....++.|
T Consensus 86 ~~~~grqy 93 (93)
T d1h2vz_ 86 GFKEGRQY 93 (93)
T ss_dssp CCCTTCC-
T ss_pred CCCCCCCC
Confidence 99999887
No 5
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=5.1e-23 Score=152.47 Aligned_cols=86 Identities=24% Similarity=0.395 Sum_probs=82.0
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
...++|||+|||..+|+++|+++|++||.|.+|+|++++.+|.++|||||+|.+.++|.+|++.|||..|+|+.|+|++|
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 35689999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred cCCcCC
Q 013840 427 RDNKQN 432 (435)
Q Consensus 427 ~~~~~~ 432 (435)
+.+.++
T Consensus 87 ~~~~~n 92 (93)
T d1x5ua1 87 SAHNKN 92 (93)
T ss_dssp TTTSCC
T ss_pred CCCCCC
Confidence 998764
No 6
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.88 E-value=6.8e-23 Score=148.53 Aligned_cols=80 Identities=34% Similarity=0.566 Sum_probs=77.3
Q ss_pred CceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccC
Q 013840 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428 (435)
Q Consensus 349 ~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~ 428 (435)
+++|||+|||.++|+++|+++|++||.|.+|+|.+++.+|+++|||||+|.++++|++|++.|||..+.|+.|+|+||++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 47899999999999999999999999999999999988999999999999999999999999999999999999999874
No 7
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.88 E-value=1.2e-22 Score=148.86 Aligned_cols=82 Identities=27% Similarity=0.447 Sum_probs=78.8
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
++++|||+|||..+|+++|+++|+.||+|.+|+|++++.+|+++|||||+|.+.++|.+|+..|||..|.|++|+|+||.
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~ 85 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF 85 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEec
Confidence 56899999999999999999999999999999999998899999999999999999999999999999999999999998
Q ss_pred CC
Q 013840 428 DN 429 (435)
Q Consensus 428 ~~ 429 (435)
+|
T Consensus 86 ~k 87 (88)
T d1rk8a_ 86 VK 87 (88)
T ss_dssp EC
T ss_pred CC
Confidence 76
No 8
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.9e-22 Score=148.62 Aligned_cols=83 Identities=25% Similarity=0.405 Sum_probs=79.8
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
+.++|||+|||..+|+++|+++|+.||+|.+|+|+.++.+|.++|||||+|.+.++|.+|++.|||..++|++|+|+||+
T Consensus 7 ~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ak 86 (90)
T d2cq0a1 7 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAK 86 (90)
T ss_dssp SSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeee
Confidence 56899999999999999999999999999999999998899999999999999999999999999999999999999998
Q ss_pred CCc
Q 013840 428 DNK 430 (435)
Q Consensus 428 ~~~ 430 (435)
++.
T Consensus 87 p~~ 89 (90)
T d2cq0a1 87 PST 89 (90)
T ss_dssp CCC
T ss_pred CCC
Confidence 765
No 9
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.8e-22 Score=145.20 Aligned_cols=78 Identities=24% Similarity=0.403 Sum_probs=75.7
Q ss_pred eEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccC
Q 013840 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428 (435)
Q Consensus 351 ~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~ 428 (435)
+|||+|||..+|+++|+++|+.||+|.+|+|++++.+|+++|||||+|.++++|..|++.|||..+.||+|+|+||+.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 699999999999999999999999999999999998999999999999999999999999999999999999999863
No 10
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.2e-22 Score=149.27 Aligned_cols=85 Identities=27% Similarity=0.431 Sum_probs=80.6
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||..+|+++|+++|+.||+|.+|.|+.++.+|+++|||||+|.++++|.+|++.|||..++|+.|+|++|+
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 45799999999999999999999999999999999999899999999999999999999999999999999999999998
Q ss_pred CCcCC
Q 013840 428 DNKQN 432 (435)
Q Consensus 428 ~~~~~ 432 (435)
++...
T Consensus 84 p~~~k 88 (89)
T d2cqba1 84 PMRIK 88 (89)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 76543
No 11
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=4.6e-22 Score=144.17 Aligned_cols=79 Identities=37% Similarity=0.602 Sum_probs=76.6
Q ss_pred ceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccC
Q 013840 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428 (435)
Q Consensus 350 ~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~ 428 (435)
++|||+|||.++|+++|+++|++||+|.+|+|+++..+|.++|||||+|.++++|.+|++.|||..++|++|+|+||++
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 6799999999999999999999999999999999988999999999999999999999999999999999999999875
No 12
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.87 E-value=3e-21 Score=154.77 Aligned_cols=85 Identities=35% Similarity=0.538 Sum_probs=80.9
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||.++|+++|+++|+.||+|.+|.|++++.+|+++|||||+|.+.++|.+|++.|||..|+||+|+|++|+
T Consensus 41 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~ 120 (139)
T d1u6fa1 41 VLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAA 120 (139)
T ss_dssp TTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 45789999999999999999999999999999999999899999999999999999999999999999999999999998
Q ss_pred CCcCC
Q 013840 428 DNKQN 432 (435)
Q Consensus 428 ~~~~~ 432 (435)
.+..+
T Consensus 121 ~~~~~ 125 (139)
T d1u6fa1 121 SGHQR 125 (139)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 77654
No 13
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=8.9e-22 Score=142.73 Aligned_cols=77 Identities=23% Similarity=0.480 Sum_probs=74.1
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEE
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV 423 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v 423 (435)
.++++|||+|||..+|+++|+++|++||.|.+|.|+.++.+|+++|||||+|.+.++|.+|++.|||..|+||+|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 35689999999999999999999999999999999999888999999999999999999999999999999999987
No 14
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.2e-21 Score=143.55 Aligned_cols=83 Identities=25% Similarity=0.426 Sum_probs=77.5
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||.++|+++|+++|+.||.|.+|.|+.++.+|+++|||||+|.++++|.+|++.+ ..|+||.|.|+++.
T Consensus 7 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~Gr~i~v~~a~ 84 (90)
T d2cqga1 7 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMIDGRWCDCKLPN 84 (90)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEETTEEEEEECCC
T ss_pred CCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccCCEEeEEEeCC
Confidence 5589999999999999999999999999999999999989999999999999999999999864 48999999999999
Q ss_pred CCcCC
Q 013840 428 DNKQN 432 (435)
Q Consensus 428 ~~~~~ 432 (435)
+++..
T Consensus 85 ~k~~~ 89 (90)
T d2cqga1 85 SKQSQ 89 (90)
T ss_dssp TTCCC
T ss_pred CCCCC
Confidence 88753
No 15
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=1.1e-21 Score=147.28 Aligned_cols=84 Identities=25% Similarity=0.386 Sum_probs=80.5
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||..+|+++|+++|++||.|.+|.|+.++.+|+++|||||+|.+.++|.+|++.|||..|+||.|+|.+++
T Consensus 7 ~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~ 86 (99)
T d1whwa_ 7 GSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPST 86 (99)
T ss_dssp SCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECC
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 45789999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred CCcC
Q 013840 428 DNKQ 431 (435)
Q Consensus 428 ~~~~ 431 (435)
.+..
T Consensus 87 ~~~~ 90 (99)
T d1whwa_ 87 IKKE 90 (99)
T ss_dssp CCST
T ss_pred CCCc
Confidence 8764
No 16
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=4.5e-22 Score=144.64 Aligned_cols=82 Identities=34% Similarity=0.503 Sum_probs=78.7
Q ss_pred ceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccCC
Q 013840 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429 (435)
Q Consensus 350 ~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~~ 429 (435)
..|||+|||..+|+++|+++|++||+|.+|+|++++.+|.++|||||+|.++++|..|++.|||..|+|++|+|++|+..
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 36999999999999999999999999999999999989999999999999999999999999999999999999999876
Q ss_pred cC
Q 013840 430 KQ 431 (435)
Q Consensus 430 ~~ 431 (435)
.+
T Consensus 82 ~~ 83 (85)
T d2u2fa_ 82 AK 83 (85)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 17
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=9.9e-22 Score=142.90 Aligned_cols=79 Identities=30% Similarity=0.665 Sum_probs=75.3
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCC--eEEEEEE
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG--KKLKVQL 425 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~g--r~i~v~~ 425 (435)
.+++|||+|||..+|+++|+++|++||+|.+++|++++.+|+++|||||+|.++++|.+|++.|||..+.| ++|+|+|
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 46899999999999999999999999999999999998899999999999999999999999999999998 5699998
Q ss_pred c
Q 013840 426 K 426 (435)
Q Consensus 426 a 426 (435)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 18
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.86 E-value=1.4e-21 Score=142.36 Aligned_cols=79 Identities=29% Similarity=0.560 Sum_probs=75.8
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCC--eEEEEEE
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG--KKLKVQL 425 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~g--r~i~v~~ 425 (435)
.+++|||+|||..+|+++|+++|++||+|.+++|++++.+|+++|||||+|.++++|.+|++.|||..+.| ++|+|+|
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~ 84 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEE
Confidence 56889999999999999999999999999999999998899999999999999999999999999999977 8999999
Q ss_pred c
Q 013840 426 K 426 (435)
Q Consensus 426 a 426 (435)
|
T Consensus 85 A 85 (85)
T d1b7fa2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 7
No 19
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.7e-21 Score=142.32 Aligned_cols=84 Identities=20% Similarity=0.349 Sum_probs=77.4
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
.++++|||+|||.++|+++|+++|+.||+|.+|.|+.++.+ .+|||||+|.+.++|.+|++.|||..|.|+.|+|+||
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~--~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a 83 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 83 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCS--SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCc--cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 45689999999999999999999999999999999988644 4799999999999999999999999999999999999
Q ss_pred cCCcCC
Q 013840 427 RDNKQN 432 (435)
Q Consensus 427 ~~~~~~ 432 (435)
+++...
T Consensus 84 ~~~~~~ 89 (90)
T d2cqia1 84 TTPSSQ 89 (90)
T ss_dssp CCTTCC
T ss_pred CCCCCC
Confidence 887654
No 20
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=1.3e-21 Score=139.78 Aligned_cols=77 Identities=27% Similarity=0.437 Sum_probs=74.1
Q ss_pred eEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccC
Q 013840 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428 (435)
Q Consensus 351 ~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~ 428 (435)
.|||+|||.++|+++|+++|++||.|.+++|..++ +|+++|||||+|.++++|.+|++.|||..++|++|+|+++.+
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 59999999999999999999999999999999886 899999999999999999999999999999999999999864
No 21
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=1.3e-21 Score=145.10 Aligned_cols=84 Identities=20% Similarity=0.447 Sum_probs=78.5
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCC-CCCcceEEEEEeCCHHHHHHHHHhc-CCceeCCeEEEEEE
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA-TGVSKCFGFVSYESPASAQNAIAMM-NGCQLGGKKLKVQL 425 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~-~g~~~g~afV~F~~~~~A~~A~~~l-~g~~l~gr~i~v~~ 425 (435)
..++|||+|||..+|+++|+++|+.||.|.+|+|+++.. +|+++|||||+|.+.++|.+|+..| ||..|.|++|+|+|
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 568999999999999999999999999999999987743 7999999999999999999999998 89999999999999
Q ss_pred ccCCcC
Q 013840 426 KRDNKQ 431 (435)
Q Consensus 426 a~~~~~ 431 (435)
|+.+..
T Consensus 87 A~~~~~ 92 (94)
T d2cpha1 87 ADSEVT 92 (94)
T ss_dssp CCCCCC
T ss_pred cCCCCC
Confidence 988764
No 22
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.3e-21 Score=146.34 Aligned_cols=84 Identities=29% Similarity=0.421 Sum_probs=78.1
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||..+|+++|+++|+.||+|.+|.|+.++.+|+++|||||+|.+.++|.+|++.+|+ .|.||+|+|++|.
T Consensus 9 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 9 TFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAY 87 (103)
T ss_dssp SSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEEST
T ss_pred CCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcC
Confidence 447899999999999999999999999999999999988999999999999999999999999876 7999999999998
Q ss_pred CCcCC
Q 013840 428 DNKQN 432 (435)
Q Consensus 428 ~~~~~ 432 (435)
.+...
T Consensus 88 ~~~~p 92 (103)
T d2cqda1 88 LGAKP 92 (103)
T ss_dssp TTCCC
T ss_pred CCCCC
Confidence 76543
No 23
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=4.6e-21 Score=141.90 Aligned_cols=83 Identities=29% Similarity=0.534 Sum_probs=77.3
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
...++|||+|||..+|+++|+++|+.||+|.+|.|+.++ +.++|||||+|.++++|.+|+..|||..|+|++|+|++|
T Consensus 9 ~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A 86 (93)
T d2cq3a1 9 STPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 86 (93)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCT--TTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccc--cCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 356899999999999999999999999999999999885 447999999999999999999999999999999999999
Q ss_pred cCCcC
Q 013840 427 RDNKQ 431 (435)
Q Consensus 427 ~~~~~ 431 (435)
+.|..
T Consensus 87 ~~r~~ 91 (93)
T d2cq3a1 87 TARVM 91 (93)
T ss_dssp CSSCC
T ss_pred CcCCC
Confidence 98764
No 24
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.85 E-value=9.7e-22 Score=141.89 Aligned_cols=80 Identities=15% Similarity=0.314 Sum_probs=69.9
Q ss_pred CceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccC
Q 013840 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428 (435)
Q Consensus 349 ~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~ 428 (435)
.++|||+|||..+|+++|+++|+.||.|..+.++.+..+|+++|||||+|.+.++|.+|++.|||..+.|++|+|+++++
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 37999999999999999999999999999998888777899999999999999999999999999999999999999874
No 25
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.1e-21 Score=144.78 Aligned_cols=86 Identities=27% Similarity=0.519 Sum_probs=81.4
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
+..+|||+|||.++|+++|+++|+.||.|..+.++.++.+|.++|||||+|.++++|.+|++.|||..|+|++|+|++|.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 45789999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred CCcCCC
Q 013840 428 DNKQNK 433 (435)
Q Consensus 428 ~~~~~~ 433 (435)
.+..++
T Consensus 84 ~~~~~r 89 (90)
T d1x5sa1 84 KSSDNR 89 (90)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 887654
No 26
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.1e-21 Score=142.26 Aligned_cols=81 Identities=30% Similarity=0.495 Sum_probs=76.3
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCcEEEE-EEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccCCc
Q 013840 352 LFIYHIPQEFGDQELGNAFQAFGRVLSA-KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 430 (435)
Q Consensus 352 v~V~nLp~~~t~~~L~~~F~~fG~v~~v-~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~~~ 430 (435)
|||+|||.++|+++|+++|++||.|.++ .|++++.+|+++|||||+|.++++|.+|++.|||..++|++|+|++|..++
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999999765 788888899999999999999999999999999999999999999999887
Q ss_pred CC
Q 013840 431 QN 432 (435)
Q Consensus 431 ~~ 432 (435)
.+
T Consensus 81 ~k 82 (83)
T d1x5ta1 81 SK 82 (83)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 27
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=4e-21 Score=139.11 Aligned_cols=80 Identities=24% Similarity=0.368 Sum_probs=75.7
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||.++|+++|+++|+.||.|.++.|+.++.+|+++|||||+|.++++|.+|++ +++..|.||+|+|+.|.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 45799999999999999999999999999999999999899999999999999999999998 48999999999999986
Q ss_pred C
Q 013840 428 D 428 (435)
Q Consensus 428 ~ 428 (435)
+
T Consensus 84 s 84 (84)
T d1l3ka1 84 S 84 (84)
T ss_dssp C
T ss_pred C
Confidence 4
No 28
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=4e-21 Score=140.02 Aligned_cols=79 Identities=29% Similarity=0.519 Sum_probs=73.4
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCC---CcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccC
Q 013840 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG---VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428 (435)
Q Consensus 352 v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g---~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~ 428 (435)
|||+|||.++|+++|+++|++||.|.+|.|++++.++ .++|||||+|.++++|.+|++.|||..++|++|+|+|++.
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999999999887554 5799999999999999999999999999999999999865
Q ss_pred Cc
Q 013840 429 NK 430 (435)
Q Consensus 429 ~~ 430 (435)
+.
T Consensus 81 ~~ 82 (85)
T d2cpfa1 81 AT 82 (85)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 29
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3e-21 Score=146.43 Aligned_cols=82 Identities=29% Similarity=0.542 Sum_probs=78.5
Q ss_pred CceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccC
Q 013840 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428 (435)
Q Consensus 349 ~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~ 428 (435)
.++|||+|||.++|+++|+++|+.||+|.+|.|+.++.+|+++|||||+|.+.++|.+|++.|||..|.|+.|+|+++..
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 47899999999999999999999999999999999998999999999999999999999999999999999999999876
Q ss_pred Cc
Q 013840 429 NK 430 (435)
Q Consensus 429 ~~ 430 (435)
+.
T Consensus 88 ~~ 89 (104)
T d1p1ta_ 88 EK 89 (104)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 30
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.7e-21 Score=141.25 Aligned_cols=82 Identities=35% Similarity=0.565 Sum_probs=76.4
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
...+|||+|||.++|+++|+++|+.||.|.++.|+.+. +.++|||||+|.+.++|.+|++.|||..|+|++|+|++++
T Consensus 7 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 7 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp TTTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 34689999999999999999999999999999999885 4578999999999999999999999999999999999999
Q ss_pred CCcC
Q 013840 428 DNKQ 431 (435)
Q Consensus 428 ~~~~ 431 (435)
+++.
T Consensus 85 ~~~~ 88 (89)
T d1cvja2 85 SRKE 88 (89)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 8764
No 31
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=9.3e-22 Score=139.70 Aligned_cols=76 Identities=25% Similarity=0.397 Sum_probs=73.3
Q ss_pred ceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 350 ~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
|.|||+|||.++|+++|+++|++||+|.+++|++++.+|+++|||||+|.++++|.+|++ +|+..++||.|+|++|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 689999999999999999999999999999999999899999999999999999999998 6999999999999986
No 32
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.6e-21 Score=146.23 Aligned_cols=81 Identities=23% Similarity=0.389 Sum_probs=76.8
Q ss_pred CceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccC
Q 013840 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 428 (435)
Q Consensus 349 ~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~ 428 (435)
.++|||+|||.++|+++|+++|+.||+|.+|.|++++.+|+++|||||+|.+.++|.+|+. |||..|.|+.|+|++++.
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCC
Confidence 4789999999999999999999999999999999998899999999999999999999996 899999999999999876
Q ss_pred Cc
Q 013840 429 NK 430 (435)
Q Consensus 429 ~~ 430 (435)
+.
T Consensus 97 ~~ 98 (101)
T d2cq4a1 97 EK 98 (101)
T ss_dssp HH
T ss_pred CC
Confidence 53
No 33
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=7.8e-21 Score=142.82 Aligned_cols=84 Identities=24% Similarity=0.379 Sum_probs=79.2
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||+++|+++|+++|++||+|..+.|++++.++.++|||||+|.++++|.+|++ +++..|.|+.|.|++|+
T Consensus 19 ~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 19 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCS
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECc
Confidence 34799999999999999999999999999999999998899999999999999999999986 69999999999999999
Q ss_pred CCcCC
Q 013840 428 DNKQN 432 (435)
Q Consensus 428 ~~~~~ 432 (435)
++...
T Consensus 98 ~ke~~ 102 (103)
T d1x4ba1 98 AREES 102 (103)
T ss_dssp SCCCC
T ss_pred ccCCC
Confidence 88764
No 34
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.83 E-value=4.8e-21 Score=139.57 Aligned_cols=81 Identities=25% Similarity=0.508 Sum_probs=71.2
Q ss_pred CCceEEEeCCCCCCC-HHHHHHHhhcCCcEEEEEEEe-eCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEE
Q 013840 348 PGANLFIYHIPQEFG-DQELGNAFQAFGRVLSAKVFV-DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 425 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t-~~~L~~~F~~fG~v~~v~i~~-~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~ 425 (435)
..++|||+|||.++| +++|+++|++||.|.+|+|.. +..+|+++|||||+|.+.++|.+|++ |||..|+||.|+|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 568999999999986 556999999999999999875 34689999999999999999999996 899999999999999
Q ss_pred ccCC
Q 013840 426 KRDN 429 (435)
Q Consensus 426 a~~~ 429 (435)
++.+
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9865
No 35
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=1.5e-20 Score=141.16 Aligned_cols=85 Identities=27% Similarity=0.476 Sum_probs=79.4
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcC------CceeCCeE
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN------GCQLGGKK 420 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~------g~~l~gr~ 420 (435)
..+++|||+|||.++|+++|+++|+.||+|.++.++.++.++.++|||||+|.+.++|.+|++.|| |..+.||+
T Consensus 6 ~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~ 85 (98)
T d1x4ha1 6 TEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQ 85 (98)
T ss_dssp CCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCE
T ss_pred CCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEE
Confidence 356899999999999999999999999999999999998899999999999999999999999886 67899999
Q ss_pred EEEEEccCCcC
Q 013840 421 LKVQLKRDNKQ 431 (435)
Q Consensus 421 i~v~~a~~~~~ 431 (435)
|+|++|++|.+
T Consensus 86 l~v~~a~~k~~ 96 (98)
T d1x4ha1 86 LKVDLAVTRDE 96 (98)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEECCCCCc
Confidence 99999998764
No 36
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.3e-20 Score=142.40 Aligned_cols=87 Identities=29% Similarity=0.480 Sum_probs=79.1
Q ss_pred cCCCCceEEEeCCCCCCCHHHHHHHhhcCCcEE--------EEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCcee
Q 013840 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL--------SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416 (435)
Q Consensus 345 ~~~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~--------~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l 416 (435)
+....++|||+|||..+|+++|+++|+.||.|. .+.+..++.+|+++|||||+|.++++|.+|++.|||..|
T Consensus 4 ~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 83 (101)
T d2cpea1 4 EDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 83 (101)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEE
Confidence 344678999999999999999999999999884 466777777899999999999999999999999999999
Q ss_pred CCeEEEEEEccCCcC
Q 013840 417 GGKKLKVQLKRDNKQ 431 (435)
Q Consensus 417 ~gr~i~v~~a~~~~~ 431 (435)
.||+|+|++|+.+..
T Consensus 84 ~gr~i~V~~a~~~~p 98 (101)
T d2cpea1 84 QGSKLKVSLARKKPP 98 (101)
T ss_dssp TTEECEEECSSCCCC
T ss_pred CCEEEEEEEcCCCCC
Confidence 999999999998764
No 37
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=7.3e-21 Score=134.58 Aligned_cols=75 Identities=25% Similarity=0.466 Sum_probs=71.3
Q ss_pred eEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 351 ~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
.|||+|||.++|+++|+++|++||+|.++.|+.++.+|+++|||||+|.++++|.+|++ +++..|.|+.|+|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 48999999999999999999999999999999999899999999999999999999998 6999999999999754
No 38
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.82 E-value=2.5e-21 Score=142.37 Aligned_cols=80 Identities=24% Similarity=0.334 Sum_probs=75.0
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||.++|+++|+++|+.||.|.++.|+.+ .+|+++|||||+|.++++|.+|++ |||..++|++|+|.+|+
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 5679999999999999999999999999999988766 489999999999999999999996 89999999999999998
Q ss_pred CC
Q 013840 428 DN 429 (435)
Q Consensus 428 ~~ 429 (435)
.|
T Consensus 90 ~k 91 (91)
T d1fjeb1 90 GR 91 (91)
T ss_dssp CS
T ss_pred CC
Confidence 75
No 39
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=5e-20 Score=136.88 Aligned_cols=81 Identities=19% Similarity=0.459 Sum_probs=74.4
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
.++++|||+|||.++|+++|+++|+.||.|..+.+..+ +.++|||||+|.+.++|..|++.|||..|.|++|+|+||
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a 88 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFP 88 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEec
Confidence 46689999999999999999999999999999987543 557899999999999999999999999999999999999
Q ss_pred cCCc
Q 013840 427 RDNK 430 (435)
Q Consensus 427 ~~~~ 430 (435)
+...
T Consensus 89 ~~~r 92 (95)
T d1x4aa1 89 RSGR 92 (95)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8754
No 40
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.4e-20 Score=138.57 Aligned_cols=78 Identities=26% Similarity=0.524 Sum_probs=73.2
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
+..++|||+|||..+|+++|+++|+.||+|.+|+|+++ +|||||+|.++++|.+|+..|||..|+|++|+|+|+
T Consensus 16 ~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~a 89 (96)
T d1x4ga1 16 PKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 89 (96)
T ss_dssp SSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 35689999999999999999999999999999999865 589999999999999999999999999999999999
Q ss_pred cCCc
Q 013840 427 RDNK 430 (435)
Q Consensus 427 ~~~~ 430 (435)
+.+.
T Consensus 90 k~~p 93 (96)
T d1x4ga1 90 KESP 93 (96)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8765
No 41
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=5.8e-20 Score=131.77 Aligned_cols=76 Identities=17% Similarity=0.444 Sum_probs=72.8
Q ss_pred ceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 350 ~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
++|||+|||.++|+++|+++|++||.|..+.++.++.++.++|||||+|.++++|.+|++ +||..|+||.|+|+.|
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 689999999999999999999999999999999999999999999999999999998886 7999999999999976
No 42
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=1.8e-20 Score=136.80 Aligned_cols=80 Identities=19% Similarity=0.291 Sum_probs=72.2
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
+..++|||+|||.++|++||+++|+.||.|....++.+..+|+++|+|||+|.+.++|.+|++.||+..++||+|+|++|
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 35678999999999999999999999999977444444468999999999999999999999999999999999999986
No 43
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.5e-21 Score=145.72 Aligned_cols=85 Identities=21% Similarity=0.395 Sum_probs=80.5
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
++++|||+|||.++|+++|+++|+.||.|..+.+..+..+|+++|||||+|.+.++|.+|++.|||..|.|++|+|+||+
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 56899999999999999999999999999999998887789999999999999999999999999999999999999999
Q ss_pred CCcCC
Q 013840 428 DNKQN 432 (435)
Q Consensus 428 ~~~~~ 432 (435)
.+.++
T Consensus 97 ~k~~r 101 (102)
T d2cpxa1 97 NKKQR 101 (102)
T ss_dssp CCSCC
T ss_pred CcccC
Confidence 98753
No 44
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.81 E-value=2.9e-20 Score=134.41 Aligned_cols=79 Identities=19% Similarity=0.431 Sum_probs=71.9
Q ss_pred cCCCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeC-CeEEEE
Q 013840 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG-GKKLKV 423 (435)
Q Consensus 345 ~~~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~-gr~i~v 423 (435)
..+++++|||+|||..+|+++|+++|+.||+|.+|++++++ +|||||+|.++++|.+|++.|||..|. |++|+|
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~-----~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v 78 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFTTELQSNAAKEALQGFKITPTHAMKI 78 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTT-----CSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeeccc-----ceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEE
Confidence 45578999999999999999999999999999999997553 689999999999999999999999885 689999
Q ss_pred EEccC
Q 013840 424 QLKRD 428 (435)
Q Consensus 424 ~~a~~ 428 (435)
+||+.
T Consensus 79 ~~akk 83 (83)
T d2b0ga1 79 TFAKK 83 (83)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 99873
No 45
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=1.3e-19 Score=131.25 Aligned_cols=79 Identities=19% Similarity=0.237 Sum_probs=73.7
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||.++|+++|+++|+.||.|.+|.|..++ +|+++|||||+|.++++|.+|++ +++..+.|+.|.|.+++
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 35799999999999999999999999999999998875 89999999999999999999996 69999999999999975
Q ss_pred C
Q 013840 428 D 428 (435)
Q Consensus 428 ~ 428 (435)
+
T Consensus 83 d 83 (85)
T d1zh5a2 83 D 83 (85)
T ss_dssp G
T ss_pred C
Confidence 4
No 46
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=5.6e-20 Score=141.94 Aligned_cols=79 Identities=23% Similarity=0.325 Sum_probs=73.5
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
.+++|||+|||..+|+++|+++|++||+|.+|.+.. ++.++|||||+|.+.++|..|++.|||..|.|++|+|.+++
T Consensus 6 ~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~---~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~ 82 (114)
T d2f9da1 6 VNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGN---TPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYN 82 (114)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEC---STTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccc---cCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 468999999999999999999999999999999875 46679999999999999999999999999999999999987
Q ss_pred CC
Q 013840 428 DN 429 (435)
Q Consensus 428 ~~ 429 (435)
.+
T Consensus 83 ~~ 84 (114)
T d2f9da1 83 AN 84 (114)
T ss_dssp HH
T ss_pred CC
Confidence 54
No 47
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.4e-20 Score=132.59 Aligned_cols=75 Identities=16% Similarity=0.363 Sum_probs=71.2
Q ss_pred eEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 351 ~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
.|||+|||.++|+++|+++|++||.|.+|.|+.++.+|+++|||||+|.+.++|.+|++. ++..++|+.|.|++|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhh-CCCEECCEEeEEEEC
Confidence 489999999999999999999999999999999998999999999999999999999975 778999999999875
No 48
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.7e-19 Score=136.66 Aligned_cols=83 Identities=18% Similarity=0.404 Sum_probs=73.5
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeC-CCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK-ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~-~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
+.++|||+|||.++|+++|+++|+.|| |+.+.++.++ .+|+++|||||+|.+.++|++|+ .||+..|.||.|+|++|
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEEC
Confidence 458999999999999999999999999 7788777654 47899999999999999998666 58999999999999999
Q ss_pred cCCcCC
Q 013840 427 RDNKQN 432 (435)
Q Consensus 427 ~~~~~~ 432 (435)
+.+...
T Consensus 92 ~~~~~~ 97 (104)
T d1wi8a_ 92 DQAQDK 97 (104)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 877643
No 49
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.80 E-value=1.2e-19 Score=135.08 Aligned_cols=81 Identities=15% Similarity=0.321 Sum_probs=74.6
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
+.++|||+|||.++|+++|+++|+.||.|..+.. ++.++|||||+|.+.++|.+|++.|||..|.||+|+|.|+.
T Consensus 15 ~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~ 89 (96)
T d1fjca_ 15 AARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTG 89 (96)
T ss_dssp GGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 5689999999999999999999999998876643 68899999999999999999999999999999999999999
Q ss_pred CCcCCC
Q 013840 428 DNKQNK 433 (435)
Q Consensus 428 ~~~~~~ 433 (435)
.+...+
T Consensus 90 ~k~~~r 95 (96)
T d1fjca_ 90 EKGGTR 95 (96)
T ss_dssp SSCCCC
T ss_pred CCCCCC
Confidence 987654
No 50
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=3.6e-20 Score=131.56 Aligned_cols=75 Identities=21% Similarity=0.399 Sum_probs=72.0
Q ss_pred eEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 351 ~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
.|||+|||.++|+++|+++|+.||.|..+.++.++.+|.++|||||+|.+.++|.+|++ +||..|+||+|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 48999999999999999999999999999999998899999999999999999999997 8999999999999986
No 51
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=6.8e-20 Score=137.74 Aligned_cols=80 Identities=28% Similarity=0.463 Sum_probs=74.5
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
+.++|||+|||.++|+++|+++|+.||+|.++.+..+. ++.++|||||+|.+.++|.+|++.|||..|.||++.|..++
T Consensus 17 ~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~ 95 (101)
T d1x5oa1 17 DPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTE 95 (101)
T ss_dssp CTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCC
Confidence 56899999999999999999999999999999998885 89999999999999999999999999999999998887665
Q ss_pred C
Q 013840 428 D 428 (435)
Q Consensus 428 ~ 428 (435)
+
T Consensus 96 P 96 (101)
T d1x5oa1 96 P 96 (101)
T ss_dssp C
T ss_pred C
Confidence 3
No 52
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.7e-19 Score=134.25 Aligned_cols=77 Identities=25% Similarity=0.461 Sum_probs=70.0
Q ss_pred CCceEEEeCCC-CCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 348 PGANLFIYHIP-QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 348 ~~~~v~V~nLp-~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
..++|||+||| ..+++++|+++|++||.|.+|.| ++|||||+|.+.++|.+|++.|||..|.|++|+|+|+
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 85 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLA 85 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEET
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 45789999996 67889999999999999999998 3689999999999999999999999999999999999
Q ss_pred cCCcCC
Q 013840 427 RDNKQN 432 (435)
Q Consensus 427 ~~~~~~ 432 (435)
+.+...
T Consensus 86 ~~~~~~ 91 (98)
T d1wf2a_ 86 AEPKVN 91 (98)
T ss_dssp TSCCCC
T ss_pred CCCCCC
Confidence 876543
No 53
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.2e-19 Score=130.30 Aligned_cols=82 Identities=32% Similarity=0.550 Sum_probs=75.4
Q ss_pred cCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
..+++|||+|||+++|+++|+++|++||+|.+++++.|+.++.++|||||+|.+.++|.+|++.||+.. +.|..++|++
T Consensus 4 ~k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~-~~G~~~~i~V 82 (85)
T d1fxla2 4 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK-PSGATEPITV 82 (85)
T ss_dssp GTTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCC-CTTCSSCCEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCE-eCCCCEEEEE
Confidence 345789999999999999999999999999999999999899999999999999999999999999985 6666788888
Q ss_pred ecc
Q 013840 92 KYA 94 (435)
Q Consensus 92 ~~~ 94 (435)
+|+
T Consensus 83 ~~A 85 (85)
T d1fxla2 83 KFA 85 (85)
T ss_dssp EEC
T ss_pred EeC
Confidence 875
No 54
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.4e-19 Score=135.56 Aligned_cols=85 Identities=14% Similarity=0.166 Sum_probs=76.3
Q ss_pred CCCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEE
Q 013840 346 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 425 (435)
Q Consensus 346 ~~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~ 425 (435)
.....+|||+|||+++|++||+++|+.+|.|..+.++.++.+++++|+|||+|.++++|++|++ +|+..|+||.|+|.+
T Consensus 12 ~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~ 90 (104)
T d1wg5a_ 12 TANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFK 90 (104)
T ss_dssp CSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEE
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEE
Confidence 3356789999999999999999999999999887676666799999999999999999999886 899999999999999
Q ss_pred ccCCcC
Q 013840 426 KRDNKQ 431 (435)
Q Consensus 426 a~~~~~ 431 (435)
++.++-
T Consensus 91 ~~~~~~ 96 (104)
T d1wg5a_ 91 SSRAEV 96 (104)
T ss_dssp ECTTTS
T ss_pred CCHHHh
Confidence 987653
No 55
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.79 E-value=2.8e-19 Score=129.85 Aligned_cols=83 Identities=35% Similarity=0.558 Sum_probs=75.5
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
...+++|||+|||+++|+++|+++|++||+|.++++++++.+++++|||||+|.+.++|.+|++.||+.. +.+..++|+
T Consensus 3 ~~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~-~~g~~~~l~ 81 (85)
T d1b7fa2 3 SIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI-PEGGSQPLS 81 (85)
T ss_dssp TTTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCC-CTTCSSCCE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCE-eCCCCeEEE
Confidence 3456789999999999999999999999999999999999999999999999999999999999999975 555668898
Q ss_pred eecc
Q 013840 91 VKYA 94 (435)
Q Consensus 91 ~~~~ 94 (435)
++|+
T Consensus 82 V~~A 85 (85)
T d1b7fa2 82 VRLA 85 (85)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8875
No 56
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.1e-19 Score=136.83 Aligned_cols=85 Identities=12% Similarity=0.206 Sum_probs=75.4
Q ss_pred cCCCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEE
Q 013840 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 424 (435)
Q Consensus 345 ~~~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~ 424 (435)
....+.+|||+|||+++|++||+++|+.|| +..|.++.+. +|.++|||||+|.+.++|++|++ ||+..|+||.|+|.
T Consensus 11 ~~~~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~ 87 (102)
T d1weza_ 11 QSTTGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIGP-DGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELF 87 (102)
T ss_dssp CCSSSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEESS-SSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEE
T ss_pred cCCCCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEec-CCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEE
Confidence 344668999999999999999999999998 5578887775 79999999999999999999986 79999999999999
Q ss_pred EccCCcCC
Q 013840 425 LKRDNKQN 432 (435)
Q Consensus 425 ~a~~~~~~ 432 (435)
++..+...
T Consensus 88 ~s~~~~~~ 95 (102)
T d1weza_ 88 LNSTAGTS 95 (102)
T ss_dssp EECCCCCC
T ss_pred EcCCCCCC
Confidence 98877643
No 57
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.2e-19 Score=139.04 Aligned_cols=81 Identities=25% Similarity=0.398 Sum_probs=73.3
Q ss_pred CceEEEeCCC-CCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 349 GANLFIYHIP-QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 349 ~~~v~V~nLp-~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
+++|||+||| ..+|+++|+++|+.||+|.+|.|++++ +|+|||+|.++++|.+|++.|||..|.|+.|+|+|++
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 5799999995 569999999999999999999998774 6899999999999999999999999999999999998
Q ss_pred CCcCCCC
Q 013840 428 DNKQNKP 434 (435)
Q Consensus 428 ~~~~~~~ 434 (435)
.+....|
T Consensus 77 ~~~~~~~ 83 (109)
T d2adca1 77 HQNVQLP 83 (109)
T ss_dssp CCCCCCC
T ss_pred CCCCCCC
Confidence 7654443
No 58
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.9e-19 Score=131.82 Aligned_cols=79 Identities=22% Similarity=0.408 Sum_probs=71.2
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCcee-CCeEEEEEE
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL-GGKKLKVQL 425 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l-~gr~i~v~~ 425 (435)
+++++|||+|||.++|+++|+++|+.||.|..+.+... +.+|+|||+|.+.++|.+|+..|||..+ .|+.|+|+|
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~----~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~ 83 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ----KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSF 83 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS----SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee----cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEe
Confidence 46789999999999999999999999999988877543 3578999999999999999999999998 589999999
Q ss_pred ccCC
Q 013840 426 KRDN 429 (435)
Q Consensus 426 a~~~ 429 (435)
++++
T Consensus 84 sk~~ 87 (88)
T d2adca2 84 SKST 87 (88)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 9874
No 59
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1.1e-19 Score=132.87 Aligned_cols=77 Identities=22% Similarity=0.360 Sum_probs=70.4
Q ss_pred CCceEEEeCCCCCCCHHHH---HHHhhcCCcEEEEEEEeeCCCCCc---ceEEEEEeCCHHHHHHHHHhcCCceeCCeEE
Q 013840 348 PGANLFIYHIPQEFGDQEL---GNAFQAFGRVLSAKVFVDKATGVS---KCFGFVSYESPASAQNAIAMMNGCQLGGKKL 421 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L---~~~F~~fG~v~~v~i~~~~~~g~~---~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i 421 (435)
...+|||+|||..+|+++| +++|++||+|.+|.|++++.++.+ +|||||+|.++++|.+|++.|||..++||.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 4468999999999999999 778999999999999988766544 4999999999999999999999999999999
Q ss_pred EEE
Q 013840 422 KVQ 424 (435)
Q Consensus 422 ~v~ 424 (435)
+|+
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 986
No 60
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.6e-19 Score=134.51 Aligned_cols=84 Identities=25% Similarity=0.294 Sum_probs=75.2
Q ss_pred CceEEEeCCCCCCCHHHHHHHhhcCCc-EEEEEEEeeC-CCCCcceEEEEEeCCHHHHHHHHHhcCC--ceeCCeEEEEE
Q 013840 349 GANLFIYHIPQEFGDQELGNAFQAFGR-VLSAKVFVDK-ATGVSKCFGFVSYESPASAQNAIAMMNG--CQLGGKKLKVQ 424 (435)
Q Consensus 349 ~~~v~V~nLp~~~t~~~L~~~F~~fG~-v~~v~i~~~~-~~g~~~g~afV~F~~~~~A~~A~~~l~g--~~l~gr~i~v~ 424 (435)
+|.|||+|||..+|+++|+++|+.||+ |.++.|+++. .+|+++|||||+|.++++|.+|++.|++ ..++|+.|+|+
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 478999999999999999999999996 8999998875 3689999999999999999999999864 45689999999
Q ss_pred EccCCcCC
Q 013840 425 LKRDNKQN 432 (435)
Q Consensus 425 ~a~~~~~~ 432 (435)
||+++...
T Consensus 81 ~A~p~~~~ 88 (96)
T d2disa1 81 WAEPEIDV 88 (96)
T ss_dssp ESCSSCST
T ss_pred EcCCCCCC
Confidence 99987654
No 61
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.5e-19 Score=131.49 Aligned_cols=84 Identities=25% Similarity=0.369 Sum_probs=76.9
Q ss_pred cCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
...++|||+|||+++|+++|+++|++||+|.+++++.++.++.++|||||+|.+.++|++|++.||+..+ .| +.|++
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~-~g--~~l~V 83 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKL-YG--KPIRV 83 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBC-SS--CBCEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEE-CC--EEEEE
Confidence 4457999999999999999999999999999999999999999999999999999999999999999864 44 89999
Q ss_pred eccCchh
Q 013840 92 KYADGEL 98 (435)
Q Consensus 92 ~~~~~~~ 98 (435)
+++.++.
T Consensus 84 ~~A~~~~ 90 (93)
T d1x5ua1 84 NKASAHN 90 (93)
T ss_dssp EETTTTS
T ss_pred EEcCCCC
Confidence 9987654
No 62
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.78 E-value=2.2e-19 Score=129.72 Aligned_cols=80 Identities=26% Similarity=0.448 Sum_probs=74.0
Q ss_pred CceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeec
Q 013840 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93 (435)
Q Consensus 14 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~ 93 (435)
+++|||+|||+++|+++|+++|++||+|.+++++.++.+++++|||||+|.+.++|++||+.||+..+ .+ +.|++.|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~-~g--~~l~v~~ 78 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITV-RN--KRLKVSY 78 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEE-TT--EECEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEE-CC--EEEEEEE
Confidence 57899999999999999999999999999999999998999999999999999999999999999864 44 8899988
Q ss_pred cCc
Q 013840 94 ADG 96 (435)
Q Consensus 94 ~~~ 96 (435)
+.+
T Consensus 79 a~p 81 (82)
T d1b7fa1 79 ARP 81 (82)
T ss_dssp CCC
T ss_pred cCC
Confidence 764
No 63
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.6e-19 Score=129.08 Aligned_cols=74 Identities=31% Similarity=0.521 Sum_probs=68.7
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
.+++|||+|++ +|+++|+++|++||+|.+|.+.++ +|||||+|.+.++|..|++.|||..+.|++|+|+|++
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 75 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIAR 75 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECC
T ss_pred CCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEec
Confidence 56899999996 999999999999999999998644 5799999999999999999999999999999999998
Q ss_pred CC
Q 013840 428 DN 429 (435)
Q Consensus 428 ~~ 429 (435)
.+
T Consensus 76 ~~ 77 (79)
T d2bz2a1 76 KQ 77 (79)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 64
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.5e-19 Score=133.04 Aligned_cols=81 Identities=23% Similarity=0.423 Sum_probs=73.3
Q ss_pred CCceEEEeCCCCCCCHHHHH----HHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEE
Q 013840 348 PGANLFIYHIPQEFGDQELG----NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV 423 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~----~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v 423 (435)
++++|||+|||..+|++||+ ++|++||+|.+|.+.. +++++|||||+|.+.++|.+|++.|||..++|++|+|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 46899999999999999886 4689999999998853 4778999999999999999999999999999999999
Q ss_pred EEccCCcC
Q 013840 424 QLKRDNKQ 431 (435)
Q Consensus 424 ~~a~~~~~ 431 (435)
.||+++.+
T Consensus 79 ~~ak~~~~ 86 (91)
T d1nu4a_ 79 QYAKTDSD 86 (91)
T ss_dssp EECSSCCT
T ss_pred EEeCCCch
Confidence 99998753
No 65
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.78 E-value=4.8e-19 Score=129.38 Aligned_cols=84 Identities=21% Similarity=0.307 Sum_probs=76.1
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
...+.++|||+|||+++|+++|+++|+.||.|.+++++.|+.++.++|||||+|.+.++|++|++.||+.. +.| +.|
T Consensus 3 ~s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~-l~g--~~l 79 (88)
T d1rk8a_ 3 RSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAE-IMG--QTI 79 (88)
T ss_dssp CCC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCE-ETT--EEC
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCE-ECC--EEE
Confidence 34567899999999999999999999999999999999999999999999999999999999999999985 444 889
Q ss_pred eeeccCc
Q 013840 90 QVKYADG 96 (435)
Q Consensus 90 ~~~~~~~ 96 (435)
++.|+.+
T Consensus 80 ~V~~a~~ 86 (88)
T d1rk8a_ 80 QVDWCFV 86 (88)
T ss_dssp EEEESEE
T ss_pred EEEEecC
Confidence 9988864
No 66
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=6.2e-19 Score=124.29 Aligned_cols=74 Identities=14% Similarity=0.236 Sum_probs=68.0
Q ss_pred ceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 350 ~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
++|||+|||.++|+++|+++|+.||.|.+|.|..++ +..+|||||+|.++++|++|+. +|+..|+|++|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~--~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSL--KKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECT--TSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeec--cccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 589999999999999999999999999999999885 3456899999999999999985 7999999999999864
No 67
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=8.4e-19 Score=127.70 Aligned_cols=78 Identities=17% Similarity=0.287 Sum_probs=71.3
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||.++|+++|+++|+.||.|..+.+.. ++|||||+|.++++|.+|+..|||..|+|+.|+|+||+
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~------~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~ak 80 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK------IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 80 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE------CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc------ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEecc
Confidence 347999999999999999999999999998877743 46899999999999999999999999999999999998
Q ss_pred CCcC
Q 013840 428 DNKQ 431 (435)
Q Consensus 428 ~~~~ 431 (435)
++.+
T Consensus 81 P~~~ 84 (86)
T d2cpda1 81 PVDK 84 (86)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7764
No 68
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=4.8e-19 Score=128.10 Aligned_cols=80 Identities=23% Similarity=0.349 Sum_probs=72.1
Q ss_pred ccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCC
Q 013840 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87 (435)
Q Consensus 8 ~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~ 87 (435)
+.++.++++|||+|||+++|+++|+++|++||.|.+++++.++.+++++|||||+|.+.++|++|++.||+..+ .| +
T Consensus 3 r~~p~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~-~g--r 79 (83)
T d2cqca1 3 RANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL-DG--R 79 (83)
T ss_dssp CCSCCGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEE-TT--E
T ss_pred CCCCCCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEE-CC--E
Confidence 45567789999999999999999999999999999999999999999999999999999999999999998754 33 5
Q ss_pred cee
Q 013840 88 PLQ 90 (435)
Q Consensus 88 ~i~ 90 (435)
.|+
T Consensus 80 ~i~ 82 (83)
T d2cqca1 80 RIR 82 (83)
T ss_dssp EEE
T ss_pred EeE
Confidence 554
No 69
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.9e-19 Score=128.90 Aligned_cols=77 Identities=23% Similarity=0.370 Sum_probs=70.3
Q ss_pred ceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCc-eeCCeEEEEEEccC
Q 013840 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC-QLGGKKLKVQLKRD 428 (435)
Q Consensus 350 ~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~-~l~gr~i~v~~a~~ 428 (435)
.+|||+|||.++|+++|+++|++||.|.++.+... +|||||+|.++++|.+|++.|||. .++|++|+|+||++
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 47999999999999999999999999988877654 689999999999999999999996 69999999999998
Q ss_pred CcCC
Q 013840 429 NKQN 432 (435)
Q Consensus 429 ~~~~ 432 (435)
+..+
T Consensus 76 k~~r 79 (80)
T d2cqha1 76 KKLR 79 (80)
T ss_dssp CCCC
T ss_pred cCcC
Confidence 7653
No 70
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=2.7e-19 Score=129.93 Aligned_cols=77 Identities=25% Similarity=0.489 Sum_probs=71.8
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||.++++++|+++|+.||+|.+|.+.++ +|||||+|.+.++|.+|++.|||..+.|++|+|+||.
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~ 80 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFAC 80 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 3468999999999999999999999999999999755 5799999999999999999999999999999999998
Q ss_pred CCc
Q 013840 428 DNK 430 (435)
Q Consensus 428 ~~~ 430 (435)
.+.
T Consensus 81 ~~~ 83 (86)
T d2cpja1 81 HSA 83 (86)
T ss_dssp CCS
T ss_pred CcC
Confidence 764
No 71
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=5.7e-19 Score=129.08 Aligned_cols=85 Identities=25% Similarity=0.280 Sum_probs=75.4
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
....+++|||+|||+++|+++|+++|+.||.|.+++++.|+.++.++|||||+|.+.++|++||+..+ .+.| +.|
T Consensus 4 ~~~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~~---~l~G--r~i 78 (90)
T d2cqga1 4 AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRH---MIDG--RWC 78 (90)
T ss_dssp CCCCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSCE---EETT--EEE
T ss_pred CCcCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcCC---ccCC--EEe
Confidence 44567899999999999999999999999999999999999999999999999999999999998543 4555 889
Q ss_pred eeeccCchhc
Q 013840 90 QVKYADGELE 99 (435)
Q Consensus 90 ~~~~~~~~~~ 99 (435)
.++++.++..
T Consensus 79 ~v~~a~~k~~ 88 (90)
T d2cqga1 79 DCKLPNSKQS 88 (90)
T ss_dssp EEECCCTTCC
T ss_pred EEEeCCCCCC
Confidence 9998876544
No 72
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=8.8e-20 Score=128.21 Aligned_cols=71 Identities=31% Similarity=0.565 Sum_probs=68.5
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEE
Q 013840 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 422 (435)
Q Consensus 352 v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~ 422 (435)
|||+|||.++|+++|+++|+.||.|.++++.+++.++.++|+|||+|.++++|.+|++.|||..+.||.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999999999988999999999999999999999999999999998764
No 73
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=2.8e-19 Score=131.04 Aligned_cols=84 Identities=23% Similarity=0.343 Sum_probs=76.6
Q ss_pred cCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
...++|||+|||+++|+++|+++|+.||+|.+++++.|+.++.++|||||+|.+.++|++|++.||+..+ .| +.|.+
T Consensus 3 ~~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i-~g--~~l~v 79 (89)
T d2cqba1 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESEL-FG--RTIRV 79 (89)
T ss_dssp CCCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEE-TT--EEEEE
T ss_pred CCCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEE-CC--EEEEE
Confidence 3467999999999999999999999999999999999999999999999999999999999999999754 44 88999
Q ss_pred eccCchh
Q 013840 92 KYADGEL 98 (435)
Q Consensus 92 ~~~~~~~ 98 (435)
.++.+..
T Consensus 80 ~~a~p~~ 86 (89)
T d2cqba1 80 NLAKPMR 86 (89)
T ss_dssp EECCCCC
T ss_pred EEeCCCC
Confidence 9987654
No 74
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=8.6e-19 Score=129.38 Aligned_cols=83 Identities=22% Similarity=0.384 Sum_probs=76.3
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
-..+++|||+|||+++|+++|+++|+.||+|.+|.++.++.++.++|||||+|.+.++|..|++.||+..+ .| +.|+
T Consensus 4 ~~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~-~g--r~i~ 80 (93)
T d1h2vz_ 4 LKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRL-DD--RIIR 80 (93)
T ss_dssp TTTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEE-TT--EECE
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEE-CC--EEEE
Confidence 35788999999999999999999999999999999999999999999999999999999999999999864 44 8899
Q ss_pred eeccCc
Q 013840 91 VKYADG 96 (435)
Q Consensus 91 ~~~~~~ 96 (435)
+.|+..
T Consensus 81 V~~a~~ 86 (93)
T d1h2vz_ 81 TDWDAG 86 (93)
T ss_dssp EEEESC
T ss_pred EEEcCC
Confidence 988754
No 75
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=2.5e-19 Score=137.68 Aligned_cols=78 Identities=13% Similarity=0.132 Sum_probs=71.8
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||..+|+++|+++|+.||+|.+|.|.. ++|||||+|.+.++|.+|++.|||..|.|++|+|+|+.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~------~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPE------GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCS------SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeec------cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 458999999999999999999999999999998843 46899999999999999999999999999999999998
Q ss_pred CCcC
Q 013840 428 DNKQ 431 (435)
Q Consensus 428 ~~~~ 431 (435)
....
T Consensus 83 ~~~~ 86 (111)
T d1whxa_ 83 IGVF 86 (111)
T ss_dssp TTTT
T ss_pred CCcc
Confidence 7653
No 76
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=9.3e-19 Score=131.58 Aligned_cols=89 Identities=24% Similarity=0.336 Sum_probs=79.8
Q ss_pred ccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCC
Q 013840 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87 (435)
Q Consensus 8 ~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~ 87 (435)
+.+..++++|||+|||+++|+++|+++|+.||.|.+++++.++.++.++|||||+|.+.++|++||+.||+..+ .| +
T Consensus 12 ~~~~p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~-~g--~ 88 (102)
T d2cpza1 12 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQI-GM--K 88 (102)
T ss_dssp CCCCSTTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEE-TT--E
T ss_pred CCCCCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEE-CC--E
Confidence 34456778999999999999999999999999999999999999999999999999999999999999999864 44 8
Q ss_pred ceeeeccCchhc
Q 013840 88 PLQVKYADGELE 99 (435)
Q Consensus 88 ~i~~~~~~~~~~ 99 (435)
.|++.|+.++.+
T Consensus 89 ~i~V~~a~~k~~ 100 (102)
T d2cpza1 89 RLKVQLKRSKND 100 (102)
T ss_dssp ECEEECCCCSCC
T ss_pred EEEEEEeCCCCC
Confidence 999999876544
No 77
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=5.7e-19 Score=129.66 Aligned_cols=84 Identities=23% Similarity=0.394 Sum_probs=76.6
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
..++++|||+|||.++|+++|+++|+.||+|.+++++.|+.++.++|||||+|.+.++|.+|++.|++..+ .| +.|+
T Consensus 5 ~~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~-~g--~~i~ 81 (90)
T d2cq0a1 5 ADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGY-DH--LILN 81 (90)
T ss_dssp CSSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEE-TT--EECE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEE-CC--EEEE
Confidence 34568999999999999999999999999999999999998999999999999999999999999998754 44 8899
Q ss_pred eeccCch
Q 013840 91 VKYADGE 97 (435)
Q Consensus 91 ~~~~~~~ 97 (435)
+.|+.+.
T Consensus 82 v~~akp~ 88 (90)
T d2cq0a1 82 VEWAKPS 88 (90)
T ss_dssp EEESSCC
T ss_pred EEeeeCC
Confidence 9998764
No 78
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=7.5e-19 Score=130.76 Aligned_cols=77 Identities=16% Similarity=0.203 Sum_probs=70.9
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||.+++++||+++|+.||+|.++.|.. +|||||+|.+.++|.+|++.|||..|.|+.|+|.+++
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~ 86 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIR 86 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEe
Confidence 457899999999999999999999999999999853 4799999999999999999999999999999999988
Q ss_pred CCcC
Q 013840 428 DNKQ 431 (435)
Q Consensus 428 ~~~~ 431 (435)
.+.+
T Consensus 87 ~~~~ 90 (98)
T d1wg4a_ 87 VYPE 90 (98)
T ss_dssp EECC
T ss_pred cCCC
Confidence 6554
No 79
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.2e-18 Score=125.91 Aligned_cols=80 Identities=25% Similarity=0.461 Sum_probs=73.6
Q ss_pred CceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeec
Q 013840 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93 (435)
Q Consensus 14 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~ 93 (435)
.++|||+|||+++|+++|+++|++||+|.+++++.+..++.++|||||+|.+.++|++|++.||+..+ .| +.|++.|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~-~g--~~l~v~~ 78 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-QT--KTIKVSY 78 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEE-TT--EECEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEE-CC--EEEEEEE
Confidence 35799999999999999999999999999999999988899999999999999999999999999764 44 8899988
Q ss_pred cCc
Q 013840 94 ADG 96 (435)
Q Consensus 94 ~~~ 96 (435)
+.|
T Consensus 79 AkP 81 (82)
T d1fxla1 79 ARP 81 (82)
T ss_dssp CCC
T ss_pred eeC
Confidence 865
No 80
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.8e-18 Score=128.77 Aligned_cols=79 Identities=27% Similarity=0.491 Sum_probs=72.2
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCC--eEEEEE
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG--KKLKVQ 424 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~g--r~i~v~ 424 (435)
++.++|||+|||.++|+++|+++|++||+|.++++.++ ++||||+|.+.++|.+|++.||+..|.| ++|+|+
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~ 88 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVD 88 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEE
Confidence 36689999999999999999999999999999999754 5799999999999999999999999987 589999
Q ss_pred EccCCcC
Q 013840 425 LKRDNKQ 431 (435)
Q Consensus 425 ~a~~~~~ 431 (435)
||+..+.
T Consensus 89 ~ak~~~~ 95 (97)
T d1whya_ 89 FAKSGPS 95 (97)
T ss_dssp ECCCCCC
T ss_pred eCCCCCC
Confidence 9998654
No 81
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=9.2e-19 Score=127.69 Aligned_cols=77 Identities=26% Similarity=0.370 Sum_probs=67.6
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
.+++|||+|||.++|++||+++|++|| +..+.+ ++++|||||+|.++++|++|++.||+..|+|++|+|+|++
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~ 76 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQP 76 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 457899999999999999999999999 333333 3457999999999999999999999999999999999998
Q ss_pred CCcC
Q 013840 428 DNKQ 431 (435)
Q Consensus 428 ~~~~ 431 (435)
.+..
T Consensus 77 ~~~~ 80 (88)
T d1wg1a_ 77 TDAL 80 (88)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7653
No 82
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=7.6e-19 Score=125.87 Aligned_cols=77 Identities=23% Similarity=0.432 Sum_probs=72.1
Q ss_pred eEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeeccC
Q 013840 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95 (435)
Q Consensus 16 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~~~ 95 (435)
+|||+|||+.+|+++|+++|++||+|.++++++|+.+++++|||||+|.+.++|.+|++.|++..+ .| +.|++.|+.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~-~g--r~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVI-KG--KPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEE-TT--EECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEE-CC--EEEEEEEeC
Confidence 699999999999999999999999999999999999999999999999999999999999999864 44 889998875
No 83
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=2.3e-18 Score=130.01 Aligned_cols=84 Identities=13% Similarity=0.224 Sum_probs=74.1
Q ss_pred cCCCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhc--CCceeCCeEEE
Q 013840 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM--NGCQLGGKKLK 422 (435)
Q Consensus 345 ~~~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l--~g~~l~gr~i~ 422 (435)
..+++.+|||+|||..+|++||+++|++||.|.++.+.++ +|+|||+|.+.++|.+|+..| ++..++|++|+
T Consensus 11 ~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~ 84 (104)
T d1wexa_ 11 KVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAF 84 (104)
T ss_dssp CCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCE
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEE
Confidence 3457789999999999999999999999999999999754 579999999999999999988 45678899999
Q ss_pred EEEccCCcCCCC
Q 013840 423 VQLKRDNKQNKP 434 (435)
Q Consensus 423 v~~a~~~~~~~~ 434 (435)
|+|++.+...+|
T Consensus 85 v~~s~~~~~~~~ 96 (104)
T d1wexa_ 85 FNYSTSKRITRP 96 (104)
T ss_dssp EEECSSSSCCCS
T ss_pred EEEcCCCccCCC
Confidence 999988765544
No 84
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.9e-18 Score=121.79 Aligned_cols=71 Identities=23% Similarity=0.337 Sum_probs=64.3
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccCC
Q 013840 352 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 429 (435)
Q Consensus 352 v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~~ 429 (435)
|||+|||.++|+++|+++|++|| +..+.+ ++++|+|||+|.+.++|.+|+..|||..++|++|+|+|++..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 444444 446899999999999999999999999999999999999765
No 85
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=2.4e-18 Score=125.73 Aligned_cols=80 Identities=19% Similarity=0.289 Sum_probs=72.4
Q ss_pred cCCCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhc--CCceeCCeEEE
Q 013840 345 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM--NGCQLGGKKLK 422 (435)
Q Consensus 345 ~~~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l--~g~~l~gr~i~ 422 (435)
+.+++++|||+|||.++|+++|+++|+.||.|.++.+.++ +|+|||+|.++++|.+|+..+ ++..+.|++|+
T Consensus 4 ~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~ 77 (88)
T d2cq1a1 4 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIY 77 (88)
T ss_dssp CSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEE
Confidence 4458899999999999999999999999999999998755 479999999999999999866 57799999999
Q ss_pred EEEccCCc
Q 013840 423 VQLKRDNK 430 (435)
Q Consensus 423 v~~a~~~~ 430 (435)
|.|++.+.
T Consensus 78 v~~sk~~~ 85 (88)
T d2cq1a1 78 IQYSNHKE 85 (88)
T ss_dssp EEECSCSS
T ss_pred EEECCCCC
Confidence 99998765
No 86
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=2.5e-18 Score=127.08 Aligned_cols=85 Identities=31% Similarity=0.472 Sum_probs=75.0
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecC-CCCCccceEEEEeCCHHHHHHHHHHh-cCCCcCCCCCCc
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDK-TTRASRGCCFVICPSRQEADKAVNAC-HNKKTLPGASSP 88 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~-~~~~~~g~afV~f~~~e~a~~al~~l-~~~~~~~~~~~~ 88 (435)
...+++|||+|||+++++++|+++|+.||.|.+++++.+. .++.++|||||+|.+.++|.+||+.| |+.. +.| +.
T Consensus 5 ~~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~-~~G--r~ 81 (94)
T d2cpha1 5 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTH-LYG--RR 81 (94)
T ss_dssp SSCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCB-SSS--CB
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcE-ECC--EE
Confidence 4567899999999999999999999999999999998874 47899999999999999999999998 6654 555 89
Q ss_pred eeeeccCchh
Q 013840 89 LQVKYADGEL 98 (435)
Q Consensus 89 i~~~~~~~~~ 98 (435)
|.+.|++.+.
T Consensus 82 l~V~~A~~~~ 91 (94)
T d2cpha1 82 LVLEWADSEV 91 (94)
T ss_dssp CEEEECCCCC
T ss_pred EEEEEcCCCC
Confidence 9999997654
No 87
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.4e-18 Score=125.91 Aligned_cols=80 Identities=25% Similarity=0.408 Sum_probs=73.7
Q ss_pred ceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeecc
Q 013840 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94 (435)
Q Consensus 15 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~~ 94 (435)
.+|||+|||+++|+++|+++|+.||+|.+++++.|+.|++++|||||+|.+.++|.+|++.||+.. +.| +.|.+.++
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~-l~g--~~l~V~~A 78 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQ-LGD--KKLLVQRA 78 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCC-CSS--SCCEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCE-ECC--EEEEEEEC
Confidence 479999999999999999999999999999999999999999999999999999999999999976 444 88999988
Q ss_pred Cch
Q 013840 95 DGE 97 (435)
Q Consensus 95 ~~~ 97 (435)
.+.
T Consensus 79 ~~~ 81 (85)
T d2u2fa_ 79 SVG 81 (85)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 88
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.5e-18 Score=132.14 Aligned_cols=81 Identities=21% Similarity=0.346 Sum_probs=73.4
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCcee--CCeEEEEEE
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL--GGKKLKVQL 425 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l--~gr~i~v~~ 425 (435)
+..+|||+|||+.+|+++|+++|++||.|.+|.|+.++ ++|+|||+|.++++|.+|+..|||..| .|++|+|.+
T Consensus 6 ~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~ 81 (108)
T d2adba1 6 PVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDF 81 (108)
T ss_dssp CEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEE
T ss_pred CeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEe
Confidence 55789999999999999999999999999999998774 479999999999999999999999998 478999999
Q ss_pred ccCCcCC
Q 013840 426 KRDNKQN 432 (435)
Q Consensus 426 a~~~~~~ 432 (435)
++.+...
T Consensus 82 s~~~~~~ 88 (108)
T d2adba1 82 SKLTSLN 88 (108)
T ss_dssp CSSCSCC
T ss_pred cCCcccc
Confidence 9876543
No 89
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75 E-value=1.1e-18 Score=125.64 Aligned_cols=80 Identities=16% Similarity=0.267 Sum_probs=66.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeec
Q 013840 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93 (435)
Q Consensus 14 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~ 93 (435)
.++|||+|||+++|+++|+++|++||.|..++++.+..+++++|||||+|.+.++|++|++.||+.. +.| +.|.+++
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~-~~g--~~i~V~~ 77 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLK-IEG--YTLVTKV 77 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCE-ETT--EECEEEE
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCE-ECC--EEEEEEE
Confidence 4799999999999999999999999999988888888789999999999999999999999999985 444 8999888
Q ss_pred cCc
Q 013840 94 ADG 96 (435)
Q Consensus 94 ~~~ 96 (435)
++|
T Consensus 78 a~P 80 (81)
T d2ghpa1 78 SNP 80 (81)
T ss_dssp CCC
T ss_pred ccC
Confidence 865
No 90
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1e-18 Score=132.26 Aligned_cols=84 Identities=26% Similarity=0.398 Sum_probs=75.7
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
+.+.++|||+|||+++|+++|+++|++||.|.+++++.++.+++++|||||+|.+.++|.+|++.|++..+ .| +.|+
T Consensus 5 ~~~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~-~g--~~i~ 81 (104)
T d1p1ta_ 5 DRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREF-SG--RALR 81 (104)
T ss_dssp HHHHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSC-SS--SCBE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEE-CC--EEEE
Confidence 34567999999999999999999999999999999999999999999999999999999999999998764 44 8888
Q ss_pred eeccCch
Q 013840 91 VKYADGE 97 (435)
Q Consensus 91 ~~~~~~~ 97 (435)
+.++.+.
T Consensus 82 V~~a~~~ 88 (104)
T d1p1ta_ 82 VDNAASE 88 (104)
T ss_dssp EEETTCT
T ss_pred EEECCCC
Confidence 8887654
No 91
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=2.5e-18 Score=128.68 Aligned_cols=86 Identities=23% Similarity=0.282 Sum_probs=77.2
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
...+++|||+|||+++|+++|+++|++||+|.+++++.|+.+++++|||||+|.+.++|++||+.||+.. +.| +.|.
T Consensus 5 ~~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~-~~g--r~i~ 81 (99)
T d1whwa_ 5 SSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQV-FQG--RMLH 81 (99)
T ss_dssp CCSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEE-SSS--CEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCE-ECC--EEEE
Confidence 3457789999999999999999999999999999999999999999999999999999999999999975 444 8899
Q ss_pred eeccCchhc
Q 013840 91 VKYADGELE 99 (435)
Q Consensus 91 ~~~~~~~~~ 99 (435)
+.++..+..
T Consensus 82 V~~a~~~~~ 90 (99)
T d1whwa_ 82 VLPSTIKKE 90 (99)
T ss_dssp EEECCCCST
T ss_pred EEECCCCCc
Confidence 988876543
No 92
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=7.9e-19 Score=128.21 Aligned_cols=78 Identities=15% Similarity=0.310 Sum_probs=70.3
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||.++|+++|+++|++||+|.+|++.. .++|||||+|.+.++|++|++ ++..|.|++|+|++++
T Consensus 4 ~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~-----~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~ 76 (88)
T d1wf0a_ 4 GSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK-----PFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAE 76 (88)
T ss_dssp CCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCS-----SCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEee-----ccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCC
Confidence 568999999999999999999999999999998743 457899999999999999986 7889999999999998
Q ss_pred CCcCC
Q 013840 428 DNKQN 432 (435)
Q Consensus 428 ~~~~~ 432 (435)
++...
T Consensus 77 ~k~~~ 81 (88)
T d1wf0a_ 77 PKHNS 81 (88)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 77654
No 93
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.9e-18 Score=126.01 Aligned_cols=84 Identities=30% Similarity=0.460 Sum_probs=75.6
Q ss_pred cCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
.+.++|||+|||+++|+++|+++|+.||.|..+.++.++.++.++|||||+|.+.++|++|++.|++.. +.| +.|++
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~-~~g--~~l~V 79 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKS-VDG--RQIRV 79 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCC-TTS--CCCEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCE-ECC--EEEEE
Confidence 456789999999999999999999999999999999998899999999999999999999999999976 444 88888
Q ss_pred eccCchh
Q 013840 92 KYADGEL 98 (435)
Q Consensus 92 ~~~~~~~ 98 (435)
.++.+..
T Consensus 80 ~~a~~~~ 86 (90)
T d1x5sa1 80 DQAGKSS 86 (90)
T ss_dssp EEEECCC
T ss_pred EEcCCCC
Confidence 8876543
No 94
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=1.2e-18 Score=123.41 Aligned_cols=76 Identities=28% Similarity=0.416 Sum_probs=68.0
Q ss_pred ceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeecc
Q 013840 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94 (435)
Q Consensus 15 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~~ 94 (435)
|+|||+|||+++|+++|+++|++||.|.+++++.|+.+++++|||||+|.+.++|++||+ +++. .+.| +.|.++.+
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~-~i~G--r~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRH-ELDS--KTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTC-CCSS--CCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCC-EECC--eEEEEEEC
Confidence 689999999999999999999999999999999999999999999999999999999997 5665 4555 67766643
No 95
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.5e-18 Score=124.79 Aligned_cols=84 Identities=23% Similarity=0.452 Sum_probs=73.8
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
++.+.++|||+|||.++|+++|+++|+.||+|..++++.++.+ .+|||||+|.+.++|.+|++.+++.. +.| +.|
T Consensus 4 d~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~--~~~~afV~f~~~~~A~~A~~~l~~~~-~~g--~~i 78 (90)
T d2cqia1 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAMNGRK-ILG--KEV 78 (90)
T ss_dssp CSCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCS--SCCEEEEEESSHHHHHHHHHHHTTEE-ETT--EEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCc--cceeeEEEECCHHHHHHHHHHcCCCE-ECC--EEE
Confidence 4456779999999999999999999999999999999998754 47899999999999999999999986 444 899
Q ss_pred eeeccCchh
Q 013840 90 QVKYADGEL 98 (435)
Q Consensus 90 ~~~~~~~~~ 98 (435)
++.|+.+..
T Consensus 79 ~v~~a~~~~ 87 (90)
T d2cqia1 79 KVNWATTPS 87 (90)
T ss_dssp EEEECCCTT
T ss_pred EEEEcCCCC
Confidence 999987544
No 96
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.7e-18 Score=129.29 Aligned_cols=86 Identities=30% Similarity=0.446 Sum_probs=75.7
Q ss_pred ccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCC
Q 013840 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87 (435)
Q Consensus 8 ~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~ 87 (435)
...+...++|||+|||+++|+++|+++|+.||.|.+++++.|+.+++++|||||+|.+.++|.+||+.+++ .+.| +
T Consensus 4 ~~~d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~--~l~G--r 79 (103)
T d2cqda1 4 SQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP--IIDG--R 79 (103)
T ss_dssp CCCSCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC--EETT--E
T ss_pred CCCCCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC--cCCC--E
Confidence 34555668899999999999999999999999999999999999999999999999999999999998875 3555 8
Q ss_pred ceeeeccCch
Q 013840 88 PLQVKYADGE 97 (435)
Q Consensus 88 ~i~~~~~~~~ 97 (435)
.|.+.++...
T Consensus 80 ~l~V~~a~~~ 89 (103)
T d2cqda1 80 KANVNLAYLG 89 (103)
T ss_dssp ECEEEESTTT
T ss_pred EEEEEEcCCC
Confidence 8888877543
No 97
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=9.4e-19 Score=132.15 Aligned_cols=80 Identities=13% Similarity=0.122 Sum_probs=72.0
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
...+|||+|||+++|+++|+++|+.||.|..+.++.+..+|+++|+|||+|.+.++|.+|++ +|+..|+||.|.|.++.
T Consensus 7 ~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~ 85 (103)
T d2cpya1 7 AKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVT 85 (103)
T ss_dssp CCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEEC
T ss_pred CceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECC
Confidence 45789999999999999999999999999875555555699999999999999999999996 89999999999999875
Q ss_pred C
Q 013840 428 D 428 (435)
Q Consensus 428 ~ 428 (435)
.
T Consensus 86 ~ 86 (103)
T d2cpya1 86 L 86 (103)
T ss_dssp H
T ss_pred H
Confidence 4
No 98
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.2e-18 Score=122.92 Aligned_cols=81 Identities=30% Similarity=0.483 Sum_probs=71.2
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
++...++|||+|||+++|+++|+++|+.||.|..++++.|+.++.++|||||+|.+.++|++||+. ++.. +.| +.|
T Consensus 2 epe~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~~-~~~~-i~G--r~i 77 (84)
T d1l3ka1 2 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHK-VDG--RVV 77 (84)
T ss_dssp CCGGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCE-ETT--EEC
T ss_pred CCCCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHHh-CCCE-ECC--EEE
Confidence 344567999999999999999999999999999999999999999999999999999999999974 6654 444 777
Q ss_pred eeecc
Q 013840 90 QVKYA 94 (435)
Q Consensus 90 ~~~~~ 94 (435)
+++.+
T Consensus 78 ~V~~A 82 (84)
T d1l3ka1 78 EPKRA 82 (84)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 77655
No 99
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=8.9e-19 Score=131.03 Aligned_cols=85 Identities=24% Similarity=0.372 Sum_probs=75.3
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
++.+.++|||+|||+++|+++|+++|+.||.|.+++++.++.++.++|||||+|.+.++|.+|++ ||+.. +.| +.|
T Consensus 14 ~~~~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~-~~G--~~l 89 (101)
T d2cq4a1 14 EERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQR-LLG--VPI 89 (101)
T ss_dssp THHHHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEE-ETT--EEE
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCE-ECC--EEE
Confidence 33456899999999999999999999999999999999999999999999999999999999995 88875 444 888
Q ss_pred eeeccCchh
Q 013840 90 QVKYADGEL 98 (435)
Q Consensus 90 ~~~~~~~~~ 98 (435)
.++++.++.
T Consensus 90 ~V~~a~~~~ 98 (101)
T d2cq4a1 90 IVQASQAEK 98 (101)
T ss_dssp EEEEHHHHH
T ss_pred EEEECCCCC
Confidence 888876543
No 100
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=5.1e-19 Score=128.94 Aligned_cols=73 Identities=16% Similarity=0.224 Sum_probs=67.1
Q ss_pred eEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEccCCc
Q 013840 351 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 430 (435)
Q Consensus 351 ~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~~~~ 430 (435)
.|||+|||.++|+++|+++|++||+|.++.|..+ |||||+|.+.++|.+|++.|||..|.|+.|+|.+++.+.
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 5999999999999999999999999999998543 799999999999999999999999999999988776544
No 101
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=2.6e-18 Score=131.51 Aligned_cols=80 Identities=16% Similarity=0.262 Sum_probs=72.5
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
..++|||+|||+++|++||+++|+.||.+..+.++.+..+|.++|+|||+|.+.++|++|++ |||..|+||.|+|..+.
T Consensus 17 ~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~ 95 (112)
T d1wela1 17 AGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPIT 95 (112)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEEC
T ss_pred CCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcC
Confidence 56799999999999999999999999999876666666699999999999999999999986 89999999999998875
Q ss_pred C
Q 013840 428 D 428 (435)
Q Consensus 428 ~ 428 (435)
.
T Consensus 96 ~ 96 (112)
T d1wela1 96 K 96 (112)
T ss_dssp H
T ss_pred h
Confidence 4
No 102
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.2e-17 Score=123.17 Aligned_cols=87 Identities=25% Similarity=0.426 Sum_probs=76.3
Q ss_pred ccccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCC
Q 013840 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGA 85 (435)
Q Consensus 6 ~~~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~ 85 (435)
.+.+.....++|||+|||+++|+++|+++|+.||+|..|+++.++. .++|||||+|.+.++|.+|++.||+.. +.|
T Consensus 3 g~~~~~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~--~~kg~afV~f~~~~~a~~Ai~~l~~~~-~~g- 78 (93)
T d2cq3a1 3 GNSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTV-VEG- 78 (93)
T ss_dssp CCSCCSCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTT--TTCCEEEEEESCHHHHHHHHHHHTTCE-ETT-
T ss_pred CCCCCCCCCCEEEEECCCCCCCHHHHHHHHhhcceeeecccccccc--CCcceeEEEECCHHHHHHHHHHcCCCE-ECC-
Confidence 3455666778999999999999999999999999999999998874 478999999999999999999999975 444
Q ss_pred CCceeeeccCch
Q 013840 86 SSPLQVKYADGE 97 (435)
Q Consensus 86 ~~~i~~~~~~~~ 97 (435)
+.|++.++.++
T Consensus 79 -~~l~V~~A~~r 89 (93)
T d2cq3a1 79 -RKIEVNNATAR 89 (93)
T ss_dssp -EECEEEECCSS
T ss_pred -EEEEEEecCcC
Confidence 89999998764
No 103
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.73 E-value=5.9e-18 Score=135.26 Aligned_cols=87 Identities=26% Similarity=0.400 Sum_probs=77.4
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
+....++|||+|||+++|+++|+++|+.||.|.+|+++.++.+++++|||||+|.+.++|.+||+.||+..+ .| +.|
T Consensus 38 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~-~g--r~l 114 (139)
T d1u6fa1 38 EPDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNI-LN--KRL 114 (139)
T ss_dssp CTTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEEC-SS--CEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEE-CC--EEE
Confidence 344557899999999999999999999999999999999999999999999999999999999999999854 44 889
Q ss_pred eeeccCchhc
Q 013840 90 QVKYADGELE 99 (435)
Q Consensus 90 ~~~~~~~~~~ 99 (435)
++.++.....
T Consensus 115 ~V~~a~~~~~ 124 (139)
T d1u6fa1 115 KVALAASGHQ 124 (139)
T ss_dssp EEEESSCCCC
T ss_pred EEEEcCCCCC
Confidence 9998865443
No 104
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=8.9e-18 Score=118.42 Aligned_cols=74 Identities=28% Similarity=0.434 Sum_probs=66.4
Q ss_pred eEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeec
Q 013840 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93 (435)
Q Consensus 16 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~ 93 (435)
.|||+|||+++|+++|+++|++||+|.++.+..++.+++++|||||+|.+.++|++||+ +++.. +.| +.|.++.
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~-l~G--r~i~V~r 74 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHK-LNG--KVIDPKR 74 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCC-BTT--BCCEECC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCE-ECC--CEEEeeE
Confidence 58999999999999999999999999999999999999999999999999999999997 56654 555 6777654
No 105
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=3.4e-18 Score=128.17 Aligned_cols=86 Identities=26% Similarity=0.398 Sum_probs=75.1
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
+..+.++|||+|||+++|+++|+++|+.||.|..+.+.+|+.++.++|||||+|.+.++|.+||+ +++.. +.| +.|
T Consensus 16 ~~~~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~-l~G--~~i 91 (103)
T d1x4ba1 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHS-IDG--RVV 91 (103)
T ss_dssp HHHHHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEE-ETT--EEE
T ss_pred CcCCCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCe-ECC--EEE
Confidence 34455899999999999999999999999999999999999999999999999999999999996 56653 555 889
Q ss_pred eeeccCchhc
Q 013840 90 QVKYADGELE 99 (435)
Q Consensus 90 ~~~~~~~~~~ 99 (435)
.++++.++.+
T Consensus 92 ~V~~a~~ke~ 101 (103)
T d1x4ba1 92 EPKRAVAREE 101 (103)
T ss_dssp EEECCSSCCC
T ss_pred EEEECcccCC
Confidence 9988876543
No 106
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=8.5e-18 Score=119.61 Aligned_cols=76 Identities=22% Similarity=0.381 Sum_probs=69.0
Q ss_pred eEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeeccC
Q 013840 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95 (435)
Q Consensus 16 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~~~ 95 (435)
+|||+|||+++|+++|+++|++||+|.++++..++ +++++|||||+|.+.++|++|++.||+.. +.| +.|++.++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~-l~g--~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVP-LDG--RPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCE-ETT--EECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCE-ECC--EEEEEEEee
Confidence 59999999999999999999999999999999887 69999999999999999999999999975 444 788877654
No 107
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=5.7e-18 Score=126.25 Aligned_cols=78 Identities=17% Similarity=0.328 Sum_probs=70.3
Q ss_pred CCCceEEEeCCCCC-CCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHH--hcCCceeCCeEEEE
Q 013840 347 PPGANLFIYHIPQE-FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA--MMNGCQLGGKKLKV 423 (435)
Q Consensus 347 ~~~~~v~V~nLp~~-~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~--~l~g~~l~gr~i~v 423 (435)
..+++|||+|||.+ +|+++|+++|+.||.|.++.++++ +|+|||+|.+.++|.+|++ .+++..++|++|+|
T Consensus 16 ~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V 89 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKV 89 (99)
T ss_dssp CCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEE
T ss_pred CCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEEE
Confidence 35689999999975 899999999999999999999755 5799999999999999997 46888999999999
Q ss_pred EEccCCc
Q 013840 424 QLKRDNK 430 (435)
Q Consensus 424 ~~a~~~~ 430 (435)
+|++.+.
T Consensus 90 ~~s~~~~ 96 (99)
T d1x4fa1 90 DLSEKYK 96 (99)
T ss_dssp EEECSCS
T ss_pred EEcCCcc
Confidence 9998765
No 108
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=2.3e-17 Score=123.48 Aligned_cols=88 Identities=20% Similarity=0.288 Sum_probs=76.2
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCC---CCC
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPG---ASS 87 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~---~~~ 87 (435)
..++++|||+|||+++|+++|+++|++||+|..+.++.++.++.++|||||+|.+.++|.+||+.|++.....+ .++
T Consensus 5 ~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr 84 (98)
T d1x4ha1 5 VTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGR 84 (98)
T ss_dssp CCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSC
T ss_pred CCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCE
Confidence 44578999999999999999999999999999999999998899999999999999999999999986533322 347
Q ss_pred ceeeeccCchh
Q 013840 88 PLQVKYADGEL 98 (435)
Q Consensus 88 ~i~~~~~~~~~ 98 (435)
.|++.++.++.
T Consensus 85 ~l~v~~a~~k~ 95 (98)
T d1x4ha1 85 QLKVDLAVTRD 95 (98)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEEECCCCC
Confidence 88888887654
No 109
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=5.4e-18 Score=122.50 Aligned_cols=79 Identities=27% Similarity=0.458 Sum_probs=70.9
Q ss_pred EEEecCCCCCCHHHHHHHHhccCceeE-EEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeeccC
Q 013840 17 LFVGQVPKHMTEAQLLAMFKEFALVDE-VNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95 (435)
Q Consensus 17 l~v~nLp~~~t~~~l~~~f~~~g~i~~-~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~~~ 95 (435)
|||+|||+++|+++|+++|+.||.|.. +++++++.+++++|||||+|.+.++|++||+.|++.. +.| +.|++.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~-~~g--r~l~v~~a~ 77 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQY-LCN--RPITVSYAF 77 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCE-ETT--EECEEEESC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcE-ECC--EEEEEEEec
Confidence 799999999999999999999999865 4788898899999999999999999999999999975 444 889999987
Q ss_pred chh
Q 013840 96 GEL 98 (435)
Q Consensus 96 ~~~ 98 (435)
++.
T Consensus 78 ~k~ 80 (83)
T d1x5ta1 78 KKD 80 (83)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 110
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.2e-17 Score=121.70 Aligned_cols=78 Identities=17% Similarity=0.197 Sum_probs=70.1
Q ss_pred CCCceEEEeCCCCC-CCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhc--CCceeCCeEEEE
Q 013840 347 PPGANLFIYHIPQE-FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM--NGCQLGGKKLKV 423 (435)
Q Consensus 347 ~~~~~v~V~nLp~~-~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l--~g~~l~gr~i~v 423 (435)
..+++|||+|||.. +|++||+++|+.||+|.+|.++.+ +++|||+|.+.++|..|+..| ++..+.|++|+|
T Consensus 6 ~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V 79 (89)
T d1x4da1 6 ETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRV 79 (89)
T ss_dssp CCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEE
Confidence 36789999999986 899999999999999999999766 358999999999999999966 678899999999
Q ss_pred EEccCCc
Q 013840 424 QLKRDNK 430 (435)
Q Consensus 424 ~~a~~~~ 430 (435)
+|++..+
T Consensus 80 ~~s~~~~ 86 (89)
T d1x4da1 80 HLSQKYK 86 (89)
T ss_dssp EEECCCT
T ss_pred EECCCcc
Confidence 9998654
No 111
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.3e-17 Score=121.05 Aligned_cols=78 Identities=24% Similarity=0.373 Sum_probs=69.5
Q ss_pred EEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCC---CccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeec
Q 013840 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR---ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93 (435)
Q Consensus 17 l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~---~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~ 93 (435)
|||+|||+++|+++|+++|+.||.|.+++++.++.++ .++|||||+|.+.++|++|++.||+.. +.| +.|.+.+
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~-~~g--~~i~V~~ 77 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHT-VDG--HKLEVRI 77 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCE-ETT--EECEEEC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCE-ECC--EEEEEEE
Confidence 7999999999999999999999999999999887655 468999999999999999999999975 444 8899998
Q ss_pred cCch
Q 013840 94 ADGE 97 (435)
Q Consensus 94 ~~~~ 97 (435)
+...
T Consensus 78 a~~~ 81 (85)
T d2cpfa1 78 SERA 81 (85)
T ss_dssp SSCS
T ss_pred CCCC
Confidence 7643
No 112
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=7e-18 Score=118.50 Aligned_cols=74 Identities=23% Similarity=0.417 Sum_probs=64.9
Q ss_pred eEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeec
Q 013840 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93 (435)
Q Consensus 16 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~ 93 (435)
+|||+|||+++|+++|+++|++||+|..++++.++.+++++|||||+|.+.++|++||+.. +. .+.| +.+.++.
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~~-~~-~i~g--~~i~vk~ 74 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK-YH-NVGL--SKCEIKV 74 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTCS-SC-CBTT--BCCEEEC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhhC-CC-EECC--EEeEEEE
Confidence 5999999999999999999999999999999999999999999999999999999999753 33 3555 5565553
No 113
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2.9e-17 Score=123.14 Aligned_cols=85 Identities=22% Similarity=0.368 Sum_probs=73.5
Q ss_pred ccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCC
Q 013840 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87 (435)
Q Consensus 8 ~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~ 87 (435)
+..+.+.++|||+|||+++|+++|+++|+.||.|..+.+..+. ++.++|||||+|.+.++|++|++.|||..+ .| +
T Consensus 12 ~~~~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i-~g--r 87 (101)
T d1x5oa1 12 KQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFI-KT--P 87 (101)
T ss_dssp SCCCCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCC-CC--C
T ss_pred ccccCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEE-CC--c
Confidence 3445567899999999999999999999999999999988886 688999999999999999999999999864 33 6
Q ss_pred ceeeeccCc
Q 013840 88 PLQVKYADG 96 (435)
Q Consensus 88 ~i~~~~~~~ 96 (435)
++.+.++.+
T Consensus 88 ~~~v~~~~P 96 (101)
T d1x5oa1 88 PGVSAPTEP 96 (101)
T ss_dssp TTSCCCSSC
T ss_pred CCccCCCCC
Confidence 777666654
No 114
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.70 E-value=4.7e-17 Score=117.25 Aligned_cols=80 Identities=20% Similarity=0.373 Sum_probs=70.1
Q ss_pred cCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCc
Q 013840 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSP 88 (435)
Q Consensus 9 ~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~ 88 (435)
.+..++++|||+|||.++|+++|+++|+.||+|..++++.+ .+|||||+|.+.++|..|++.|||..+..+ +.
T Consensus 3 ~~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~-----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~--~~ 75 (83)
T d2b0ga1 3 TEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN-----RHDIAFVEFTTELQSNAAKEALQGFKITPT--HA 75 (83)
T ss_dssp CCCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT-----TCSCEEEEESSHHHHHHHHHHHTTCBSSTT--CB
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc-----cceeEEEecCCHHHHHHHHHHhCCcEeCCC--cE
Confidence 45567899999999999999999999999999999998654 357999999999999999999999876554 67
Q ss_pred eeeeccC
Q 013840 89 LQVKYAD 95 (435)
Q Consensus 89 i~~~~~~ 95 (435)
|++.|+.
T Consensus 76 i~v~~ak 82 (83)
T d2b0ga1 76 MKITFAK 82 (83)
T ss_dssp CEEEECC
T ss_pred EEEEEec
Confidence 8888875
No 115
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.4e-17 Score=121.75 Aligned_cols=82 Identities=18% Similarity=0.300 Sum_probs=72.1
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeee
Q 013840 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVK 92 (435)
Q Consensus 13 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~ 92 (435)
...+|||+|||+++|+++|+++|+.||.|..++++.++. .++|||||+|.+.++|++||+.||+.. +.| +.|.+.
T Consensus 7 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~--~~kg~afV~f~~~~~A~~Ai~~l~g~~-~~g--~~i~V~ 81 (89)
T d1cvja2 7 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGML-LND--RKVFVG 81 (89)
T ss_dssp TTTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTT--BCCSCEEEEESCHHHHHHHTTSSSEEE-ETT--EEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecC--CCcceeEEEECCHHHHHHHHHHcCCCE-ECC--EEEEEE
Confidence 345799999999999999999999999999999998874 478999999999999999999999875 444 899999
Q ss_pred ccCchhc
Q 013840 93 YADGELE 99 (435)
Q Consensus 93 ~~~~~~~ 99 (435)
++.++.+
T Consensus 82 ~a~~~~~ 88 (89)
T d1cvja2 82 RFKSRKE 88 (89)
T ss_dssp ECCCTTT
T ss_pred ECCCCCC
Confidence 8876543
No 116
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=8.7e-18 Score=126.07 Aligned_cols=80 Identities=13% Similarity=0.197 Sum_probs=71.3
Q ss_pred CCceEEEeCCCCCC-C----HHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEE
Q 013840 348 PGANLFIYHIPQEF-G----DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 422 (435)
Q Consensus 348 ~~~~v~V~nLp~~~-t----~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~ 422 (435)
..++|||+||+.++ + +++|+++|+.||+|+++.++++ +|+|||+|.++++|.+|++.|||..|.|++|+
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~ 77 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS------FKRVRINFSNPLSAADARLRLHKTEFLGKEMK 77 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETT------TTEEEEECSSTTHHHHHHHTSTTSEETTEECE
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecC------CCEEEEEECCHHHHHHHHHHhcccccCCCEeE
Confidence 56899999999886 3 3579999999999999999754 57999999999999999999999999999999
Q ss_pred EEEccCCcCCC
Q 013840 423 VQLKRDNKQNK 433 (435)
Q Consensus 423 v~~a~~~~~~~ 433 (435)
|.|++.+..+.
T Consensus 78 v~~a~~~~~~~ 88 (104)
T d1weya_ 78 LYFAQTLHIGS 88 (104)
T ss_dssp EECCCCSSCCS
T ss_pred EeecccCCCCC
Confidence 99998876544
No 117
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=2.6e-17 Score=126.73 Aligned_cols=106 Identities=16% Similarity=0.293 Sum_probs=83.9
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
.+..+++|||+|||+++|+++|+++|+.||.|.+|++..+ +.++|||||+|.+.++|.+|++.|||.. +.| +.|
T Consensus 3 pp~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~-~~g--r~l 76 (114)
T d2f9da1 3 PPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFN-VCN--RYL 76 (114)
T ss_dssp CTTCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCE-ETT--EEC
T ss_pred ccCCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCE-ECC--EEE
Confidence 3456789999999999999999999999999999998765 4568999999999999999999999986 444 888
Q ss_pred eeeccCchhccccceEEEecCCCCCCHHHHHHhhhccCC
Q 013840 90 QVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGT 128 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~l~v~~lp~~~t~~~l~~~f~~~g~ 128 (435)
.+.++....... .......++++..+.+.+|.
T Consensus 77 ~V~~a~~~~~~~-------~~~~~~~~~~~~~~~~~~g~ 108 (114)
T d2f9da1 77 VVLYYNANRAFQ-------KMDTKKKEEQLKLLKEKYGI 108 (114)
T ss_dssp EEEECCHHHHTT-------TSCHHHHHHHHHHHHHHHCC
T ss_pred EEEEcCCCchhh-------hhHHHHHHHHHHHHHHHhCC
Confidence 888876543321 11222455677777777763
No 118
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=4.4e-17 Score=122.56 Aligned_cols=88 Identities=24% Similarity=0.310 Sum_probs=76.4
Q ss_pred ccCccCCceEEEecCCCCCCHHHHHHHHhccCcee--------EEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCC
Q 013840 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVD--------EVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNK 79 (435)
Q Consensus 8 ~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~--------~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~ 79 (435)
.+++...++|||+|||+++|+++|+++|+.||+|. .+.+..++.+++++|||||+|.+.++|.+||+.||+.
T Consensus 2 p~~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~ 81 (101)
T d2cpea1 2 PDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGK 81 (101)
T ss_dssp CCCCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTC
T ss_pred CCCCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCC
Confidence 34566788999999999999999999999999874 4677778888999999999999999999999999997
Q ss_pred CcCCCCCCceeeeccCchh
Q 013840 80 KTLPGASSPLQVKYADGEL 98 (435)
Q Consensus 80 ~~~~~~~~~i~~~~~~~~~ 98 (435)
. +.| +.|++.++.+..
T Consensus 82 ~-~~g--r~i~V~~a~~~~ 97 (101)
T d2cpea1 82 D-FQG--SKLKVSLARKKP 97 (101)
T ss_dssp E-ETT--EECEEECSSCCC
T ss_pred E-ECC--EEEEEEEcCCCC
Confidence 6 444 999999987644
No 119
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=1.2e-17 Score=125.82 Aligned_cols=87 Identities=21% Similarity=0.313 Sum_probs=78.1
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
...++++|||+|||.++|+++|+++|+.||.|..+.+..+..+++++|||||+|.+.++|.+||+.||+..+ .| +.|
T Consensus 14 ~~~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~-~g--~~l 90 (102)
T d2cpxa1 14 PGEPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKL-YG--KIL 90 (102)
T ss_dssp CCSCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBC-SS--CBC
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEE-CC--EEE
Confidence 445688999999999999999999999999999999888887899999999999999999999999999764 44 899
Q ss_pred eeeccCchhc
Q 013840 90 QVKYADGELE 99 (435)
Q Consensus 90 ~~~~~~~~~~ 99 (435)
++.|+.++..
T Consensus 91 ~V~~ak~k~~ 100 (102)
T d2cpxa1 91 VIEFGKNKKQ 100 (102)
T ss_dssp EEEECCCCSC
T ss_pred EEEeCCCccc
Confidence 9999987554
No 120
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=4.8e-17 Score=120.83 Aligned_cols=86 Identities=21% Similarity=0.305 Sum_probs=73.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHhccCc-eeEEEEEecC-CCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 14 RVKLFVGQVPKHMTEAQLLAMFKEFAL-VDEVNIIKDK-TTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 14 ~~~l~v~nLp~~~t~~~l~~~f~~~g~-i~~~~~~~~~-~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
+|+|||+|||.++|+++|+++|+.||+ |.+++++.+. .+++++|||||+|.+.++|.+|++.|++..+.. .++.|.+
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~-~g~~i~V 79 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQL-WGHQIAV 79 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCB-TTBCCEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEE-CCEEEEE
Confidence 478999999999999999999999996 8999998874 468899999999999999999999997654432 3489999
Q ss_pred eccCchhcc
Q 013840 92 KYADGELER 100 (435)
Q Consensus 92 ~~~~~~~~~ 100 (435)
.|+.+..+.
T Consensus 80 ~~A~p~~~~ 88 (96)
T d2disa1 80 DWAEPEIDV 88 (96)
T ss_dssp EESCSSCST
T ss_pred EEcCCCCCC
Confidence 999875543
No 121
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=6.4e-17 Score=115.58 Aligned_cols=77 Identities=25% Similarity=0.439 Sum_probs=68.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeec
Q 013840 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93 (435)
Q Consensus 14 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~ 93 (435)
.++|||+|||+++|+++|+++|++||.|..+++..++.++.++|||||+|.+.++|.+|++ +++.. +.| +.|.++.
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~-l~G--r~i~V~~ 77 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHT-VNG--HNCEVRK 77 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCE-ETT--EECEEEE
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCE-ECC--EEEEEEE
Confidence 4789999999999999999999999999999999999999999999999999999999995 67764 555 7777764
Q ss_pred c
Q 013840 94 A 94 (435)
Q Consensus 94 ~ 94 (435)
+
T Consensus 78 A 78 (79)
T d1l3ka2 78 A 78 (79)
T ss_dssp C
T ss_pred C
Confidence 3
No 122
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=6.2e-17 Score=114.49 Aligned_cols=75 Identities=29% Similarity=0.433 Sum_probs=67.6
Q ss_pred eEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeecc
Q 013840 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94 (435)
Q Consensus 16 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~~ 94 (435)
.|||+|||+++|+++|+++|+.||.+..+.++.++.++.++|||||+|.+.++|++|++ +|+.. +.| +.|.++++
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~-l~g--r~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHE-INN--KMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCC-BTT--BCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCE-ECC--eEEEEEEC
Confidence 58999999999999999999999999999999999899999999999999999999996 88775 544 77777653
No 123
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=2.1e-16 Score=115.31 Aligned_cols=80 Identities=19% Similarity=0.199 Sum_probs=69.5
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
..++++|||+|||+++|+++|+++|++||.|..+.++.. +.+|+|||+|.+.++|.+|+..|||..+..| +.|+
T Consensus 7 ~pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~----~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g--~~l~ 80 (88)
T d2adca2 7 FPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ----KDRKMALIQMGSVEEAVQALIDLHNHDLGEN--HHLR 80 (88)
T ss_dssp CCSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS----SSTTCEEEEESSHHHHHHHHHHHTTCBSSSS--CBCE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee----cccceeEEEECCHHHHHHHHHhccCCEecCC--CEEE
Confidence 356889999999999999999999999999987776543 3568999999999999999999999876555 8899
Q ss_pred eeccCc
Q 013840 91 VKYADG 96 (435)
Q Consensus 91 ~~~~~~ 96 (435)
+.|+..
T Consensus 81 v~~sk~ 86 (88)
T d2adca2 81 VSFSKS 86 (88)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 988864
No 124
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=3.8e-17 Score=118.12 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=69.2
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
+...++|||+|||+++|+++|+++|+.||+|..+++..++ +++++|||||+|.+.++|++||+ +++.. +.| +.+.
T Consensus 3 ~~~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~-~~g--~~l~ 77 (85)
T d1zh5a2 3 DVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQK-YKE--TDLL 77 (85)
T ss_dssp HHHTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCE-ETT--EECE
T ss_pred CCCcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCE-ECC--EEEE
Confidence 3456899999999999999999999999999999998876 68999999999999999999996 56665 444 7787
Q ss_pred eeccC
Q 013840 91 VKYAD 95 (435)
Q Consensus 91 ~~~~~ 95 (435)
+.+..
T Consensus 78 v~~~~ 82 (85)
T d1zh5a2 78 ILFKD 82 (85)
T ss_dssp EEEGG
T ss_pred EEEcC
Confidence 77653
No 125
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.67 E-value=3.1e-17 Score=119.00 Aligned_cols=82 Identities=20% Similarity=0.387 Sum_probs=68.0
Q ss_pred cCCceEEEecCCCCCC-HHHHHHHHhccCceeEEEEEe-cCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 12 EERVKLFVGQVPKHMT-EAQLLAMFKEFALVDEVNIIK-DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t-~~~l~~~f~~~g~i~~~~~~~-~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
.+.++|||+|||+++| +++|+++|++||.|.++++.. ++.+++++|||||+|.+.++|.+||+ +|+.. +.| +.|
T Consensus 2 ~e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~-~~g--r~l 77 (86)
T d2ghpa3 2 LEGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSL-LGN--REI 77 (86)
T ss_dssp CTTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEE-ETT--EEE
T ss_pred CCCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCE-ECC--EEE
Confidence 3578999999999986 567999999999999999866 45678999999999999999999995 88875 444 889
Q ss_pred eeeccCch
Q 013840 90 QVKYADGE 97 (435)
Q Consensus 90 ~~~~~~~~ 97 (435)
.+.++.++
T Consensus 78 ~V~~a~~k 85 (86)
T d2ghpa3 78 SVSLADKK 85 (86)
T ss_dssp EEEECCCC
T ss_pred EEEEcCCC
Confidence 99888753
No 126
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=5.9e-17 Score=113.47 Aligned_cols=65 Identities=26% Similarity=0.353 Sum_probs=62.6
Q ss_pred EEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCc
Q 013840 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81 (435)
Q Consensus 17 l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~ 81 (435)
|||+|||+++|+++|+++|+.||+|..+++..++.++.++|+|||+|.+.++|++|++.|||..+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~ 65 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGV 65 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEE
Confidence 79999999999999999999999999999999999999999999999999999999999999764
No 127
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.65 E-value=1.5e-17 Score=121.90 Aligned_cols=85 Identities=20% Similarity=0.339 Sum_probs=73.1
Q ss_pred cccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCC
Q 013840 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGAS 86 (435)
Q Consensus 7 ~~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~ 86 (435)
+..++...++|||+|||+++|+++|+++|+.||.|..++++.+. +++++|||||.|.+.++|++||+ ||+.. +.|
T Consensus 6 e~~~~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~-~g~~kg~afv~F~~~e~a~~Al~-~~g~~-~~g-- 80 (91)
T d1fjeb1 6 EGSESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVR-TGTNRKFGYVDFESAEDLEKALE-LTGLK-VFG-- 80 (91)
T ss_dssp SSSSCSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEE-EETTTTEEEEEESSHHHHHHHHH-GGGEE-ETT--
T ss_pred CCCCCCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecC-CCCccEEeEEeeCCHHHHHHHHh-cCCcE-ECC--
Confidence 34556677899999999999999999999999999988886554 79999999999999999999996 88875 444
Q ss_pred CceeeeccCc
Q 013840 87 SPLQVKYADG 96 (435)
Q Consensus 87 ~~i~~~~~~~ 96 (435)
+.|++.++..
T Consensus 81 ~~i~V~~ak~ 90 (91)
T d1fjeb1 81 NEIKLEKPKG 90 (91)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEecCC
Confidence 8898888764
No 128
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=7e-18 Score=126.59 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=71.9
Q ss_pred ceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEc
Q 013840 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 426 (435)
Q Consensus 350 ~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a 426 (435)
+.++|++++.++++++|+++|++||+|.+|+|+++ .+|+++|+|||+|.+.++|.+|++.|||+++.||+|+|+|.
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 56889999999999999999999999999999877 48999999999999999999999999999999999999984
No 129
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=3.4e-16 Score=117.92 Aligned_cols=88 Identities=14% Similarity=0.184 Sum_probs=73.2
Q ss_pred cccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCC
Q 013840 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGAS 86 (435)
Q Consensus 7 ~~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~ 86 (435)
......+..+|||+|||+++|+++|+++|+.+|.+..+.++.++.++.++|+|||+|.+.++|++|++ +|+.. +.+
T Consensus 8 ~~~~~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~-i~g-- 83 (104)
T d1wg5a_ 8 NSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKER-IGH-- 83 (104)
T ss_dssp CCSSCSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCC-SSS--
T ss_pred CCCCCCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCE-Ecc--
Confidence 34445566789999999999999999999999999887777777789999999999999999999996 77764 444
Q ss_pred CceeeeccCchh
Q 013840 87 SPLQVKYADGEL 98 (435)
Q Consensus 87 ~~i~~~~~~~~~ 98 (435)
+.|.+..+...+
T Consensus 84 R~i~V~~~~~~~ 95 (104)
T d1wg5a_ 84 RYIEIFKSSRAE 95 (104)
T ss_dssp SCCEEEEECTTT
T ss_pred eEEEEEECCHHH
Confidence 778887776543
No 130
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=5e-16 Score=115.30 Aligned_cols=81 Identities=20% Similarity=0.331 Sum_probs=71.8
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
...++++|||+|||+++|+++|+++|++||.|..+++.++ ++||||+|.+.++|++|++.||+.. +.+..+.|
T Consensus 13 ~~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~-i~g~~~~l 85 (97)
T d1whya_ 13 KANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFP-LGGPDRRL 85 (97)
T ss_dssp CCCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCB-CSSSSCBC
T ss_pred CCCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCE-eCCCceEE
Confidence 4567899999999999999999999999999999998655 4599999999999999999999986 56666889
Q ss_pred eeeccCch
Q 013840 90 QVKYADGE 97 (435)
Q Consensus 90 ~~~~~~~~ 97 (435)
++.|+...
T Consensus 86 ~v~~ak~~ 93 (97)
T d1whya_ 86 RVDFAKSG 93 (97)
T ss_dssp EEEECCCC
T ss_pred EEEeCCCC
Confidence 99998754
No 131
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=3.3e-16 Score=115.83 Aligned_cols=79 Identities=16% Similarity=0.383 Sum_probs=69.7
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
.....++|||+|||.++|+++|+++|++||.|.+|+++.+ +|||||+|.+.++|.+|++.|++..+ .| +.|
T Consensus 14 ~~~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i-~g--~~l 84 (96)
T d1x4ga1 14 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTI-EG--HVV 84 (96)
T ss_dssp SCSSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEE-TT--EEC
T ss_pred CCCCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEE-CC--EEE
Confidence 3455689999999999999999999999999999999876 46999999999999999999999864 44 889
Q ss_pred eeeccCch
Q 013840 90 QVKYADGE 97 (435)
Q Consensus 90 ~~~~~~~~ 97 (435)
++.|+...
T Consensus 85 ~v~~ak~~ 92 (96)
T d1x4ga1 85 KCYWGKES 92 (96)
T ss_dssp EEECCCCC
T ss_pred EEEEcCCC
Confidence 99998653
No 132
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=3.9e-16 Score=112.94 Aligned_cols=77 Identities=32% Similarity=0.504 Sum_probs=67.8
Q ss_pred cCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
...++|||+|||+++++++|+++|++||.|.++++.+++ |||||+|.+.++|++|++.||+..+ .| +.|++
T Consensus 6 ~~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~k------~~afV~f~~~~~A~~A~~~l~g~~i-~g--~~l~V 76 (86)
T d2cpja1 6 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAEIAKVELDNMPL-RG--KQLRV 76 (86)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETTT------TEEEEECSSSHHHHHHHHHHTTCCB-TT--BCCEE
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeeccc------ceEEEEECCHHHHHHHHHHhCCCEE-CC--EEEEE
Confidence 345789999999999999999999999999999997654 5999999999999999999999864 44 88999
Q ss_pred eccCch
Q 013840 92 KYADGE 97 (435)
Q Consensus 92 ~~~~~~ 97 (435)
.|+...
T Consensus 77 ~~A~~~ 82 (86)
T d2cpja1 77 RFACHS 82 (86)
T ss_dssp EESSCC
T ss_pred EECCCc
Confidence 888643
No 133
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=5e-16 Score=114.90 Aligned_cols=81 Identities=15% Similarity=0.376 Sum_probs=70.1
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
...++++|||+|||+++|+++|+++|+.||.|..+.+..+ ...+|||||+|.+.++|++||+.||+..+ . ++.|
T Consensus 10 ~~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~-~--g~~l 83 (95)
T d1x4aa1 10 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDY-D--GYRL 83 (95)
T ss_dssp CCCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEE-T--TEEC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEE-C--CEEE
Confidence 3466789999999999999999999999999998876544 45689999999999999999999999864 4 4889
Q ss_pred eeeccCc
Q 013840 90 QVKYADG 96 (435)
Q Consensus 90 ~~~~~~~ 96 (435)
++.|+..
T Consensus 84 ~V~~a~~ 90 (95)
T d1x4aa1 84 RVEFPRS 90 (95)
T ss_dssp EEECCCC
T ss_pred EEEeccC
Confidence 9988764
No 134
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=1.2e-16 Score=116.61 Aligned_cols=77 Identities=17% Similarity=0.317 Sum_probs=66.6
Q ss_pred cCCceEEEecCCCCCCHHHH---HHHHhccCceeEEEEEecCCCCCc---cceEEEEeCCHHHHHHHHHHhcCCCcCCCC
Q 013840 12 EERVKLFVGQVPKHMTEAQL---LAMFKEFALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADKAVNACHNKKTLPGA 85 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l---~~~f~~~g~i~~~~~~~~~~~~~~---~g~afV~f~~~e~a~~al~~l~~~~~~~~~ 85 (435)
...++|||+|||+++++++| +++|++||+|..|.+++++.++.. +|||||+|.+.++|.+|++.|||.. +.|
T Consensus 6 iq~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~-~~g- 83 (89)
T d2cpia1 6 VQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV-VDG- 83 (89)
T ss_dssp CCSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEE-ETT-
T ss_pred EecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCE-ECC-
Confidence 44578999999999999999 778999999999999998876654 4899999999999999999999986 444
Q ss_pred CCceee
Q 013840 86 SSPLQV 91 (435)
Q Consensus 86 ~~~i~~ 91 (435)
+.|++
T Consensus 84 -r~lkv 88 (89)
T d2cpia1 84 -RTLKA 88 (89)
T ss_dssp -EEEEE
T ss_pred -EEEEE
Confidence 66665
No 135
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=3.6e-16 Score=119.70 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=67.4
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
..+.+++|||+|||+++++++|+++|+.||.|..|.|. ..+|||||+|.+.++|.+|++.||+..+ .+ +.|
T Consensus 6 ~~r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~------~~kg~afV~f~~~~~A~~A~~~lng~~~-~g--r~l 76 (111)
T d1whxa_ 6 SGRSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP------EGGITAIVEFLEPLEARKAFRHLAYSKF-HH--VPL 76 (111)
T ss_dssp TSEEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC------SSSSCEEEEESCHHHHHHHHHHHTTCBS-SS--SBC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee------ccCceEEEEEcCHHHHHHHHHHHcCCcc-CC--CeE
Confidence 44566899999999999999999999999999998873 3568999999999999999999999865 33 788
Q ss_pred eeeccCc
Q 013840 90 QVKYADG 96 (435)
Q Consensus 90 ~~~~~~~ 96 (435)
.+.|+..
T Consensus 77 ~v~~a~~ 83 (111)
T d1whxa_ 77 YLEWAPI 83 (111)
T ss_dssp EEEEEET
T ss_pred EEEECCC
Confidence 8877643
No 136
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=3.6e-18 Score=125.47 Aligned_cols=78 Identities=22% Similarity=0.360 Sum_probs=68.5
Q ss_pred ceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEE-----eeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEE
Q 013840 350 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF-----VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 424 (435)
Q Consensus 350 ~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~-----~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~ 424 (435)
++|||+|||.++|+++|+++|+.||.|..+.+. .+..+++++|||||+|.++++|.+|++ |||..|.|++|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 689999999999999999999999988766543 344578899999999999999999985 99999999999998
Q ss_pred EccC
Q 013840 425 LKRD 428 (435)
Q Consensus 425 ~a~~ 428 (435)
.+++
T Consensus 81 r~k~ 84 (90)
T d1u2fa_ 81 RPHD 84 (90)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 5544
No 137
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=6e-16 Score=112.30 Aligned_cols=78 Identities=22% Similarity=0.235 Sum_probs=67.1
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeee
Q 013840 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVK 92 (435)
Q Consensus 13 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~ 92 (435)
..++|||+|||+++|+++|+++|+.||.|..+.+. +++|||||+|.+.++|..|++.||+..+ .| +.|.+.
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~------~~rg~afV~f~~~~~A~~Ai~~l~~~~i-~g--~~i~V~ 77 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVL-DG--SPIEVT 77 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEE------ECSSEEEEEESSHHHHHHHHHHHSSEEE-TT--EEEEEE
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEc------cccEEEEEEeCCHHHHHHHHHHcCCCEE-CC--EEEEEE
Confidence 45799999999999999999999999998877663 3567999999999999999999999764 44 899999
Q ss_pred ccCchhc
Q 013840 93 YADGELE 99 (435)
Q Consensus 93 ~~~~~~~ 99 (435)
|+.+...
T Consensus 78 ~akP~~~ 84 (86)
T d2cpda1 78 LAKPVDK 84 (86)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9876543
No 138
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=2e-16 Score=114.92 Aligned_cols=79 Identities=16% Similarity=0.222 Sum_probs=66.1
Q ss_pred cCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
...++|||+|||+++++++|+++|+.||.+....++.+..++.++|+|||+|.+.++|++|++.||+..+ .+ +.|++
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l-~g--r~i~v 83 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPI-GS--RKVKL 83 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEE-TT--EECEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEE-CC--EEEEE
Confidence 3456799999999999999999999999987643444445799999999999999999999999999864 44 77776
Q ss_pred ec
Q 013840 92 KY 93 (435)
Q Consensus 92 ~~ 93 (435)
+.
T Consensus 84 ~l 85 (86)
T d2cqpa1 84 VL 85 (86)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 139
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.62 E-value=2.7e-16 Score=116.60 Aligned_cols=85 Identities=16% Similarity=0.275 Sum_probs=71.9
Q ss_pred cccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCC
Q 013840 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGAS 86 (435)
Q Consensus 7 ~~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~ 86 (435)
......++++|||+|||+++|+++|+++|+.||.|..++. ++.++|||||+|.+.++|++|++.||+.. +.|
T Consensus 9 ~~~~~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~-~~g-- 80 (96)
T d1fjca_ 9 TSKKVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAE-IDG-- 80 (96)
T ss_dssp TTSTTTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEE-ETT--
T ss_pred ccCcCCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCE-ECC--
Confidence 3455567899999999999999999999999998765542 57789999999999999999999999875 444
Q ss_pred CceeeeccCchhc
Q 013840 87 SPLQVKYADGELE 99 (435)
Q Consensus 87 ~~i~~~~~~~~~~ 99 (435)
+.|++.|+.++..
T Consensus 81 r~i~V~~a~~k~~ 93 (96)
T d1fjca_ 81 RSVSLYYTGEKGG 93 (96)
T ss_dssp EEEEEEECSSSCC
T ss_pred EEEEEEEeCCCCC
Confidence 9999999876543
No 140
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.62 E-value=8.4e-16 Score=107.93 Aligned_cols=73 Identities=14% Similarity=0.159 Sum_probs=62.6
Q ss_pred ceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeec
Q 013840 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93 (435)
Q Consensus 15 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~ 93 (435)
++|||+|||+++++++|+++|+.||.|..+++..++. ..+++|||+|.+.++|++||. +++.. ++| +.|.+..
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~--~~~~~afV~F~~~~~a~~Al~-~~~~~-i~g--~~i~V~~ 73 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLK--KNFRFARIEFARYDGALAAIT-KTHKV-VGQ--NEIIVSH 73 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTT--SSSEEEEEEESSHHHHHHHHT-TTTCE-ETT--EECEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecc--ccceEEEEEEcchHHhHHHHH-hcCcE-ECC--EEEEEEE
Confidence 5899999999999999999999999999999999875 345799999999999999995 67764 555 6666553
No 141
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=6.3e-16 Score=117.30 Aligned_cols=82 Identities=12% Similarity=0.147 Sum_probs=71.3
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
+.+..+|||+|||+++|+++|+++|++||.|..++++.++ .+|+|||+|.+.++|++|++.||+..+ .+..+.++
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l-~~~~~~l~ 78 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNI-YNACCTLR 78 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCS-STTCCCCE
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEe-ccCCcEEE
Confidence 4566789999999999999999999999999999998765 468999999999999999999999865 33458888
Q ss_pred eeccCch
Q 013840 91 VKYADGE 97 (435)
Q Consensus 91 ~~~~~~~ 97 (435)
+.++...
T Consensus 79 v~~s~~~ 85 (108)
T d2adba1 79 IDFSKLT 85 (108)
T ss_dssp EEECSSC
T ss_pred EEecCCc
Confidence 8887653
No 142
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=7e-16 Score=116.36 Aligned_cols=86 Identities=15% Similarity=0.295 Sum_probs=70.8
Q ss_pred cCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecC-CCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCC
Q 013840 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDK-TTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87 (435)
Q Consensus 9 ~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~-~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~ 87 (435)
....+.++|||+|||+++|+++|+++|+.|| +.+++++.++ .++.++|||||+|.+.++|++|+ .||+.. +.+ +
T Consensus 10 ~p~~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~-~~g--r 84 (104)
T d1wi8a_ 10 LPKSPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEES-LGN--K 84 (104)
T ss_dssp CCSSSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCE-ETT--E
T ss_pred CCCCCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCE-ECC--E
Confidence 3445679999999999999999999999999 6667776654 46789999999999999998777 588875 444 8
Q ss_pred ceeeeccCchhc
Q 013840 88 PLQVKYADGELE 99 (435)
Q Consensus 88 ~i~~~~~~~~~~ 99 (435)
.|++.++.++..
T Consensus 85 ~l~V~~a~~~~~ 96 (104)
T d1wi8a_ 85 RIRVDVADQAQD 96 (104)
T ss_dssp ECEEEECCCCCC
T ss_pred EEEEEECCCCCC
Confidence 899988876543
No 143
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.2e-15 Score=116.31 Aligned_cols=76 Identities=20% Similarity=0.341 Sum_probs=66.5
Q ss_pred CCceEEEecCCC-CCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 13 ERVKLFVGQVPK-HMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 13 ~~~~l~v~nLp~-~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
.+++|||+|||+ .+|+++|+++|+.||.|..++++.++ +|||||+|.+.++|.+|++.||+..+ .| +.|++
T Consensus 1 g~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l-~g--~~l~v 72 (109)
T d2adca1 1 GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKL-HG--KPIRI 72 (109)
T ss_dssp CCSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBC-SS--SBCEE
T ss_pred CCCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEE-CC--EEEEE
Confidence 368999999965 59999999999999999999998774 57999999999999999999999864 44 78888
Q ss_pred eccCc
Q 013840 92 KYADG 96 (435)
Q Consensus 92 ~~~~~ 96 (435)
.++..
T Consensus 73 ~~s~~ 77 (109)
T d2adca1 73 TLSKH 77 (109)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 88753
No 144
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=3.7e-16 Score=111.45 Aligned_cols=77 Identities=23% Similarity=0.349 Sum_probs=66.5
Q ss_pred ceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeecc
Q 013840 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94 (435)
Q Consensus 15 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~~ 94 (435)
.+|||+|||+++|+++|+++|++||.|..+++..+ +|||||+|.+.++|++|++.|||...+.| +.|++.|+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G--~~i~V~~a 73 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHG--KIMEVDYS 73 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETT--EECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECC--EEEEEEEc
Confidence 47999999999999999999999999887666553 57999999999999999999998643555 89999998
Q ss_pred Cchhc
Q 013840 95 DGELE 99 (435)
Q Consensus 95 ~~~~~ 99 (435)
.++..
T Consensus 74 ~~k~~ 78 (80)
T d2cqha1 74 VSKKL 78 (80)
T ss_dssp CCCCC
T ss_pred CCcCc
Confidence 87554
No 145
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.2e-15 Score=111.06 Aligned_cols=83 Identities=20% Similarity=0.343 Sum_probs=70.4
Q ss_pred cccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCC-CcCCCC
Q 013840 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNK-KTLPGA 85 (435)
Q Consensus 7 ~~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~-~~~~~~ 85 (435)
++.+..++++|||+|||+++|+++|+++|++||.|.++++.+++ |+|||+|.+.++|.+|++.+++. ..+.|
T Consensus 1 d~~~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~~------~~afV~f~~~e~A~~a~~~~~~~~~~~~g- 73 (88)
T d2cq1a1 1 DKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGK------NQAFLELATEEAAITMVNYYSAVTPHLRN- 73 (88)
T ss_dssp CCCCSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETTT------TEEEEEESSHHHHHHHHHHHHHSCCEETT-
T ss_pred CCCCCCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccccccc------eEEEEEeCCHHHHHHHHHHHccCCCccCC-
Confidence 35667899999999999999999999999999999999987654 59999999999999999987543 23444
Q ss_pred CCceeeeccCch
Q 013840 86 SSPLQVKYADGE 97 (435)
Q Consensus 86 ~~~i~~~~~~~~ 97 (435)
+.+++.|+..+
T Consensus 74 -~~l~v~~sk~~ 84 (88)
T d2cq1a1 74 -QPIYIQYSNHK 84 (88)
T ss_dssp -EECEEEECSCS
T ss_pred -CEEEEEECCCC
Confidence 89999888654
No 146
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=3.7e-16 Score=117.61 Aligned_cols=82 Identities=17% Similarity=0.232 Sum_probs=68.6
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
+....+|||+|||+++|+++|+++|+.||.+..+.++.+..++.++|+|||+|.+.++|++||+ +|+.. +.| +.|.
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~-i~g--r~i~ 80 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKK-LNG--REAF 80 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEE-ETT--EEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCe-ECC--cEEE
Confidence 3455789999999999999999999999998875566666679999999999999999999996 77764 544 7888
Q ss_pred eeccCc
Q 013840 91 VKYADG 96 (435)
Q Consensus 91 ~~~~~~ 96 (435)
+.++..
T Consensus 81 V~~~~~ 86 (103)
T d2cpya1 81 VHVVTL 86 (103)
T ss_dssp EEEECH
T ss_pred EEECCH
Confidence 776543
No 147
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=8.2e-16 Score=115.28 Aligned_cols=84 Identities=13% Similarity=0.095 Sum_probs=70.2
Q ss_pred ccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCC
Q 013840 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87 (435)
Q Consensus 8 ~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~ 87 (435)
..+.....+|||+|||+++|+++|+++|..||. ..+.++.+. ++..+|||||+|.+.++|++|++ +|+.. +.+ +
T Consensus 9 ~~~~~~~~~v~v~nLp~~~te~dl~~~F~~~~~-~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~-~~~~~-i~g--R 82 (102)
T d1weza_ 9 SFQSTTGHCVHMRGLPYRATENDIYNFFSPLNP-MRVHIEIGP-DGRVTGEADVEFATHEDAVAAMA-KDKAN-MQH--R 82 (102)
T ss_dssp SCCCSSSCEEEEESCCTTCCHHHHHHSSCSCCC-SEEEEEESS-SSCEEEEEEEECSSSHHHHHHHT-TSSCC-SSS--S
T ss_pred CCcCCCCCEEEEeCCCCcCCHHHHHHHHhccCc-ceeeeEEec-CCcceEEEEEEECCHHHHHHHHH-cCCCE-ECC--E
Confidence 445566789999999999999999999999985 468888877 48899999999999999999986 77764 555 7
Q ss_pred ceeeeccCch
Q 013840 88 PLQVKYADGE 97 (435)
Q Consensus 88 ~i~~~~~~~~ 97 (435)
.|++.++...
T Consensus 83 ~I~V~~s~~~ 92 (102)
T d1weza_ 83 YVELFLNSTA 92 (102)
T ss_dssp CCEEEEECCC
T ss_pred EEEEEEcCCC
Confidence 7888777654
No 148
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=6.1e-16 Score=113.43 Aligned_cols=81 Identities=16% Similarity=0.378 Sum_probs=68.4
Q ss_pred cCCceEEEecCCCCCCHHHHHH----HHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCC
Q 013840 12 EERVKLFVGQVPKHMTEAQLLA----MFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l~~----~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~ 87 (435)
+++++|||+|||+++|++||++ +|++||+|.+|++.. +++++|||||+|.+.++|.+|++.+|+.. +.| +
T Consensus 1 ~P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~-~~g--~ 74 (91)
T d1nu4a_ 1 RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFP-FYD--K 74 (91)
T ss_dssp CCCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCE-ETT--E
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCE-ECC--E
Confidence 3678999999999999999864 579999999887644 46688999999999999999999999976 444 8
Q ss_pred ceeeeccCchh
Q 013840 88 PLQVKYADGEL 98 (435)
Q Consensus 88 ~i~~~~~~~~~ 98 (435)
.+.+.|+..+.
T Consensus 75 ~l~v~~ak~~~ 85 (91)
T d1nu4a_ 75 PMRIQYAKTDS 85 (91)
T ss_dssp ECEEEECSSCC
T ss_pred EEEEEEeCCCc
Confidence 89999887543
No 149
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.1e-15 Score=110.86 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=60.0
Q ss_pred eEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeecc
Q 013840 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94 (435)
Q Consensus 16 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~~ 94 (435)
+|||+|||+++|+++|+++|+.||+|..+++..+ |||||+|.+.++|++||+.||+..+ .| +.+.+.+.
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~-~g--~~i~v~~~ 70 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKF-RS--HEGETAYI 70 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBC-CC--TTSCCCBC
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEE-CC--cEeEEeEE
Confidence 6999999999999999999999999999987543 6999999999999999999999875 33 55555544
No 150
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.3e-15 Score=112.98 Aligned_cols=79 Identities=16% Similarity=0.342 Sum_probs=66.8
Q ss_pred ccCccCCceEEEecCC-CCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCC
Q 013840 8 KKSSEERVKLFVGQVP-KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGAS 86 (435)
Q Consensus 8 ~~~~~~~~~l~v~nLp-~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~ 86 (435)
.......++|||+||| ..+++++|+++|++||+|..+++ .+|||||+|.+.++|++||+.||+..+ .|
T Consensus 9 ~~~~~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~-~g-- 77 (98)
T d1wf2a_ 9 TDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMI-AG-- 77 (98)
T ss_dssp CCCSSCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEE-TT--
T ss_pred CCCCCCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEE-CC--
Confidence 3444566789999997 57889999999999999999987 357999999999999999999999864 44
Q ss_pred CceeeeccCch
Q 013840 87 SPLQVKYADGE 97 (435)
Q Consensus 87 ~~i~~~~~~~~ 97 (435)
+.|++.++...
T Consensus 78 ~~l~V~~a~~~ 88 (98)
T d1wf2a_ 78 QVLDINLAAEP 88 (98)
T ss_dssp EECEEEETTSC
T ss_pred EEEEEEECCCC
Confidence 88999888643
No 151
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3e-15 Score=106.46 Aligned_cols=76 Identities=24% Similarity=0.336 Sum_probs=66.1
Q ss_pred ccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCcee
Q 013840 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQ 90 (435)
Q Consensus 11 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~ 90 (435)
+..+++|||+||+ +|+++|+++|++||.|.++++.++ +|||||+|.+.++|.+|++.||+..+ .| +.|+
T Consensus 2 p~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~-~g--~~l~ 70 (79)
T d2bz2a1 2 PRKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQV-ES--VQLK 70 (79)
T ss_dssp CCCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBC-SS--CBCE
T ss_pred CCCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEE-CC--EEEE
Confidence 4567899999996 899999999999999999998654 46999999999999999999999864 44 8899
Q ss_pred eeccCch
Q 013840 91 VKYADGE 97 (435)
Q Consensus 91 ~~~~~~~ 97 (435)
+.|+.++
T Consensus 71 V~~a~~~ 77 (79)
T d2bz2a1 71 VNIARKQ 77 (79)
T ss_dssp EEECCSS
T ss_pred EEEecCC
Confidence 9988654
No 152
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.8e-15 Score=110.49 Aligned_cols=80 Identities=20% Similarity=0.359 Sum_probs=69.9
Q ss_pred CCceEEEeCC--CCCC---------CHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCcee
Q 013840 348 PGANLFIYHI--PQEF---------GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416 (435)
Q Consensus 348 ~~~~v~V~nL--p~~~---------t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l 416 (435)
.+++|+|+|| |.++ .++||++.|++||.|..|.+..+ .++|+|||+|.+.++|.+|+..|||+++
T Consensus 7 ~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng~~~ 82 (99)
T d2dita1 7 HERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDGRWF 82 (99)
T ss_dssp SCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTTCEE
T ss_pred CccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCCcEE
Confidence 6789999999 5543 23689999999999999988644 4679999999999999999999999999
Q ss_pred CCeEEEEEEccCCcC
Q 013840 417 GGKKLKVQLKRDNKQ 431 (435)
Q Consensus 417 ~gr~i~v~~a~~~~~ 431 (435)
.||+|+|+++..+.+
T Consensus 83 ~gr~i~v~~~~g~~~ 97 (99)
T d2dita1 83 GGRQITAQAWDGTTD 97 (99)
T ss_dssp TTEECEEEECCSCCC
T ss_pred CCEEEEEEEeCCcCC
Confidence 999999999987754
No 153
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=3.6e-15 Score=110.52 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=65.2
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
.....++|||+|||+++++++|+++|+.||.|..+++.. +|||||+|.+.++|++||+.||+..+ .| +.|
T Consensus 11 ~~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~-~g--~~i 80 (98)
T d1wg4a_ 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKF-RS--HEG 80 (98)
T ss_dssp CCSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEE-EC--TTS
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEe-CC--eEE
Confidence 345667899999999999999999999999999998753 36999999999999999999999864 33 666
Q ss_pred eeeccCc
Q 013840 90 QVKYADG 96 (435)
Q Consensus 90 ~~~~~~~ 96 (435)
++.+...
T Consensus 81 ~v~~~~~ 87 (98)
T d1wg4a_ 81 ETSYIRV 87 (98)
T ss_dssp CEEEEEE
T ss_pred EEEEEec
Confidence 6666543
No 154
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=8.8e-16 Score=117.16 Aligned_cols=86 Identities=15% Similarity=0.241 Sum_probs=71.0
Q ss_pred ccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCC
Q 013840 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87 (435)
Q Consensus 8 ~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~ 87 (435)
+......++|||+|||+++|+++|+++|+.||.+..+.++.+..++.++|+|||+|.+.++|++|++ +|+.. +.+ +
T Consensus 12 ~~~~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~-i~g--R 87 (112)
T d1wela1 12 RSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQY-MGN--R 87 (112)
T ss_dssp SSCCCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBC-STT--S
T ss_pred CCCCCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCc-CCC--E
Confidence 3344567799999999999999999999999998876666666679999999999999999999995 78774 555 7
Q ss_pred ceeeeccCch
Q 013840 88 PLQVKYADGE 97 (435)
Q Consensus 88 ~i~~~~~~~~ 97 (435)
.|.|..+..+
T Consensus 88 ~i~V~~~~~~ 97 (112)
T d1wela1 88 FIQVHPITKK 97 (112)
T ss_dssp CBEEEEECHH
T ss_pred EEEEEEcChH
Confidence 7777665443
No 155
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=7.3e-15 Score=110.42 Aligned_cols=84 Identities=13% Similarity=0.173 Sum_probs=70.3
Q ss_pred ccccCccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCc-CCC
Q 013840 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT-LPG 84 (435)
Q Consensus 6 ~~~~~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~-~~~ 84 (435)
.......++++|||+|||+.+|+++|+++|+.||.|.++++.++ +|+|||+|.+.++|+.|++.+++..+ +.|
T Consensus 7 g~~~~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g 80 (104)
T d1wexa_ 7 GSHHKVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAG 80 (104)
T ss_dssp CSCCCCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSS
T ss_pred CCCCcCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEee
Confidence 34456678999999999999999999999999999999998654 45999999999999999998865432 334
Q ss_pred CCCceeeeccCch
Q 013840 85 ASSPLQVKYADGE 97 (435)
Q Consensus 85 ~~~~i~~~~~~~~ 97 (435)
+.+++.|+..+
T Consensus 81 --~~l~v~~s~~~ 91 (104)
T d1wexa_ 81 --QQAFFNYSTSK 91 (104)
T ss_dssp --SBCEEEECSSS
T ss_pred --EEEEEEEcCCC
Confidence 78888888643
No 156
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.8e-15 Score=109.84 Aligned_cols=75 Identities=15% Similarity=0.262 Sum_probs=62.8
Q ss_pred cCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
..+++|||+|||++++++||+++|++||. ..+.+ +..+|||||+|.+.++|++|++.||+..+ . ++.|.+
T Consensus 3 s~s~~i~V~nLp~~~t~~~l~~lF~~~G~-~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~-~--G~~l~V 72 (88)
T d1wg1a_ 3 SGSSGILVKNLPQDSNCQEVHDLLKDYDL-KYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSF-R--GKDLIV 72 (88)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHTCSSCC-CCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEE-T--TEEEEE
T ss_pred CCCCEEEEeCCCCccChHHHHHHHHhcCc-eeeee------eccCCceEEEECCHHHHHHHHHHhCCCEE-C--CEEEEE
Confidence 35679999999999999999999999993 32333 44678999999999999999999999864 4 488998
Q ss_pred eccCc
Q 013840 92 KYADG 96 (435)
Q Consensus 92 ~~~~~ 96 (435)
.++..
T Consensus 73 ~~a~~ 77 (88)
T d1wg1a_ 73 QLQPT 77 (88)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 88754
No 157
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=5.6e-15 Score=103.62 Aligned_cols=71 Identities=17% Similarity=0.394 Sum_probs=60.3
Q ss_pred EEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeeeccCc
Q 013840 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADG 96 (435)
Q Consensus 17 l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~~~~~ 96 (435)
|||+|||+++++++|+++|++|| +..+++ ++.+|||||+|.+.++|++|++.||+.. +.| +.|++.++..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~-~~g--~~l~V~~a~~ 70 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSR-LRE--RELSVQLQPT 70 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEE-SSS--CEEEEEECCS
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCcc-CCC--CEEEEEEeCC
Confidence 79999999999999999999999 444443 4567899999999999999999999975 444 8888888754
Q ss_pred h
Q 013840 97 E 97 (435)
Q Consensus 97 ~ 97 (435)
+
T Consensus 71 d 71 (75)
T d1wi6a1 71 D 71 (75)
T ss_dssp T
T ss_pred C
Confidence 3
No 158
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.8e-15 Score=109.99 Aligned_cols=78 Identities=23% Similarity=0.344 Sum_probs=65.1
Q ss_pred cCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceee
Q 013840 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~ 91 (435)
..+++|||+|||+++|+++|+++|++||.|.++++. ..++|||||+|.+.++|++||. ++. .+.| +.|.+
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~-----~~~~gfafV~f~~~~~a~~a~~--~~~-~i~g--~~l~v 72 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLCG--EDL-IIKG--ISVHI 72 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECC-----SSCCSCCEEECSCHHHHHHTTT--CEE-EETT--EEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEe-----eccCceEEEEECCHHHHHHHHh--CCC-EECC--EEeEE
Confidence 467899999999999999999999999999988763 4467899999999999999985 443 4555 88999
Q ss_pred eccCchhc
Q 013840 92 KYADGELE 99 (435)
Q Consensus 92 ~~~~~~~~ 99 (435)
.++.++..
T Consensus 73 ~~a~~k~~ 80 (88)
T d1wf0a_ 73 SNAEPKHN 80 (88)
T ss_dssp ECCCCCCC
T ss_pred EeCCCCCC
Confidence 98865443
No 159
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=3.5e-15 Score=113.82 Aligned_cols=74 Identities=12% Similarity=0.052 Sum_probs=64.8
Q ss_pred CceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCH-HHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 349 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP-ASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 349 ~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~-~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
...+||+|||..+|+++|+++|+.||+|.+|.|+++ +|||||.|.++ ++|..|+..||+..+.++.+.|.++.
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 345599999999999999999999999999999754 68999999996 78999999999999988877777765
Q ss_pred C
Q 013840 428 D 428 (435)
Q Consensus 428 ~ 428 (435)
.
T Consensus 85 ~ 85 (113)
T d1owxa_ 85 L 85 (113)
T ss_dssp C
T ss_pred c
Confidence 4
No 160
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=6.3e-15 Score=109.65 Aligned_cols=63 Identities=16% Similarity=0.274 Sum_probs=57.8
Q ss_pred CCceEEEeC--CCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCcee
Q 013840 348 PGANLFIYH--IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416 (435)
Q Consensus 348 ~~~~v~V~n--Lp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l 416 (435)
+..+|+|.| ||.++|+++|+++|++||.|.+|.+.++ +|||||+|.+.++|.+|++.|||+.+
T Consensus 17 pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 17 ATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 567889966 9999999999999999999999988755 57999999999999999999999987
No 161
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=1.5e-14 Score=107.44 Aligned_cols=81 Identities=14% Similarity=0.307 Sum_probs=66.5
Q ss_pred ccCccCCceEEEecCCCC-CCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHh--cCCCcCCC
Q 013840 8 KKSSEERVKLFVGQVPKH-MTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC--HNKKTLPG 84 (435)
Q Consensus 8 ~~~~~~~~~l~v~nLp~~-~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l--~~~~~~~~ 84 (435)
......+++|||+|||.+ +|+++|+++|+.||.|.++++..++ |+|||+|.+.++|.+|++.+ ++.. +.|
T Consensus 12 ~~~~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~k------~~afV~f~~~~~A~~Ai~~~~~~~~~-~~g 84 (99)
T d1x4fa1 12 DQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMK------SQAFIEMETREDAMAMVDHCLKKALW-FQG 84 (99)
T ss_dssp CCSSCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETTT------TEEEEECSSHHHHHHHHHHHHHSCCC-SSS
T ss_pred ccCCCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeecC------CcEEEEecchHHHHHHHHHHhcCCce-ECC
Confidence 344567789999999985 8999999999999999999987654 59999999999999999854 4433 444
Q ss_pred CCCceeeeccCch
Q 013840 85 ASSPLQVKYADGE 97 (435)
Q Consensus 85 ~~~~i~~~~~~~~ 97 (435)
+.|++.++...
T Consensus 85 --r~l~V~~s~~~ 95 (99)
T d1x4fa1 85 --RCVKVDLSEKY 95 (99)
T ss_dssp --SCCEEEEECSC
T ss_pred --EEEEEEEcCCc
Confidence 88888887543
No 162
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=7.1e-15 Score=110.26 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=70.4
Q ss_pred CCCceEEEeCC--CCCC--------CHHHHHHHhhcCCcEEEEEEEeeCCC--CCcceEEEEEeCCHHHHHHHHHhcCCc
Q 013840 347 PPGANLFIYHI--PQEF--------GDQELGNAFQAFGRVLSAKVFVDKAT--GVSKCFGFVSYESPASAQNAIAMMNGC 414 (435)
Q Consensus 347 ~~~~~v~V~nL--p~~~--------t~~~L~~~F~~fG~v~~v~i~~~~~~--g~~~g~afV~F~~~~~A~~A~~~l~g~ 414 (435)
+++++|.|+|| |..+ ..+||++.|++||.|.+|.|+++..+ ....|++||+|.+.++|.+|+..|||+
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 46789999999 5544 34689999999999999999876543 344689999999999999999999999
Q ss_pred eeCCeEEEEEEccC
Q 013840 415 QLGGKKLKVQLKRD 428 (435)
Q Consensus 415 ~l~gr~i~v~~a~~ 428 (435)
.++||.|.+.|...
T Consensus 82 ~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANRVVVTKYCDP 95 (104)
T ss_dssp CSSSSCCEEEEECH
T ss_pred EECCeEEEEEEcCH
Confidence 99999999999763
No 163
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.3e-14 Score=107.84 Aligned_cols=78 Identities=17% Similarity=0.269 Sum_probs=67.1
Q ss_pred ccCccCCceEEEec--CCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCC
Q 013840 8 KKSSEERVKLFVGQ--VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGA 85 (435)
Q Consensus 8 ~~~~~~~~~l~v~n--Lp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~ 85 (435)
.....++.+|+|.| ||.++|+++|+++|++||.|.++++..+ ++||||+|.+.++|.+|++.|||..+.++.
T Consensus 12 ~~~~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i~~~~ 85 (101)
T d2cq2a1 12 ETVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEVVDDL 85 (101)
T ss_dssp CCCSSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEEECTT
T ss_pred ccCCCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCCCCCC
Confidence 45567788999965 9999999999999999999999987655 459999999999999999999999888776
Q ss_pred CCceee
Q 013840 86 SSPLQV 91 (435)
Q Consensus 86 ~~~i~~ 91 (435)
...+.+
T Consensus 86 ~~~i~~ 91 (101)
T d2cq2a1 86 GQKITL 91 (101)
T ss_dssp SCEEEC
T ss_pred CcEEEE
Confidence 665554
No 164
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=2.5e-14 Score=103.86 Aligned_cols=81 Identities=17% Similarity=0.265 Sum_probs=67.8
Q ss_pred cCccCCceEEEecCCCC-CCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCC-cCCCCC
Q 013840 9 KSSEERVKLFVGQVPKH-MTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK-TLPGAS 86 (435)
Q Consensus 9 ~~~~~~~~l~v~nLp~~-~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~-~~~~~~ 86 (435)
.....+++|||+|||.. +|++||+++|+.||.|.++.+..++ ++|||+|.+.++|..|++.+++.. .+.|
T Consensus 3 ~~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k------~~afV~f~~~~~A~~A~~~l~~~~~~~~g-- 74 (89)
T d1x4da1 3 GRVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNKI------NEAFIEMATTEDAQAAVDYYTTTPALVFG-- 74 (89)
T ss_dssp CCCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSSS------SCEEEEESSHHHHHHHHHHHHHSCCEETT--
T ss_pred CCCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeeccc------eEEEEEEcchhhHHHHHHHHhhCCCccCC--
Confidence 45678899999999986 7899999999999999999997665 499999999999999999875332 2444
Q ss_pred CceeeeccCch
Q 013840 87 SPLQVKYADGE 97 (435)
Q Consensus 87 ~~i~~~~~~~~ 97 (435)
+++++.|+...
T Consensus 75 r~l~V~~s~~~ 85 (89)
T d1x4da1 75 KPVRVHLSQKY 85 (89)
T ss_dssp EECEEEEECCC
T ss_pred ceEEEEECCCc
Confidence 89999988643
No 165
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.46 E-value=6.4e-14 Score=99.09 Aligned_cols=74 Identities=19% Similarity=0.297 Sum_probs=62.8
Q ss_pred CCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCe-EEEEEEc
Q 013840 348 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK-KLKVQLK 426 (435)
Q Consensus 348 ~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr-~i~v~~a 426 (435)
+.+-|+|.|+|.+.+++.| ++|++||+|.++++.+ .+|||||+|.++++|.+|++ +||..|+|+ .|.|.-.
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~------~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~ 74 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSN------TGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPC 74 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECS------SSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEEC
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEecC------CCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeC
Confidence 3578999999999986555 6899999999998743 36899999999999999996 899999998 4678877
Q ss_pred cCC
Q 013840 427 RDN 429 (435)
Q Consensus 427 ~~~ 429 (435)
++|
T Consensus 75 ~~k 77 (81)
T d1wwha1 75 IDK 77 (81)
T ss_dssp CCH
T ss_pred CCh
Confidence 665
No 166
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=3e-15 Score=109.50 Aligned_cols=77 Identities=17% Similarity=0.301 Sum_probs=63.6
Q ss_pred ceEEEecCCCCCCHHHHHHHHhccCceeEEEEE-----ecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCce
Q 013840 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNII-----KDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPL 89 (435)
Q Consensus 15 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~-----~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i 89 (435)
++|||+|||+++|+++|+++|+.||.+..+.+. .+..+++++|||||+|.+.++|++|++ ||+..+ .| +.|
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~-~G--r~l 77 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIF-QG--QSL 77 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCS-SS--SCC
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEE-CC--EEE
Confidence 689999999999999999999999987665442 355667899999999999999999985 998865 44 777
Q ss_pred eeeccC
Q 013840 90 QVKYAD 95 (435)
Q Consensus 90 ~~~~~~ 95 (435)
+++.+.
T Consensus 78 ~V~r~k 83 (90)
T d1u2fa_ 78 KIRRPH 83 (90)
T ss_dssp CCBCTT
T ss_pred EECCCC
Confidence 776543
No 167
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.36 E-value=2.8e-13 Score=101.09 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=66.3
Q ss_pred cCCceEEEecCCCCC-CH----HHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCC
Q 013840 12 EERVKLFVGQVPKHM-TE----AQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGAS 86 (435)
Q Consensus 12 ~~~~~l~v~nLp~~~-t~----~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~ 86 (435)
..+++|||+||+.++ ++ ++|+++|+.||.|.++++.++ +++|||+|.+.++|.+|++.||+..+ .|
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~------~~~afV~f~~~~~A~~Ai~~lng~~~-~g-- 73 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS------FKRVRINFSNPLSAADARLRLHKTEF-LG-- 73 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETT------TTEEEEECSSTTHHHHHHHTSTTSEE-TT--
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecC------CCEEEEEECCHHHHHHHHHHhccccc-CC--
Confidence 467899999999986 43 568999999999999998754 45999999999999999999999864 44
Q ss_pred CceeeeccCchhc
Q 013840 87 SPLQVKYADGELE 99 (435)
Q Consensus 87 ~~i~~~~~~~~~~ 99 (435)
+.|++.|+.+...
T Consensus 74 ~~l~v~~a~~~~~ 86 (104)
T d1weya_ 74 KEMKLYFAQTLHI 86 (104)
T ss_dssp EECEEECCCCSSC
T ss_pred CEeEEeecccCCC
Confidence 8999999865443
No 168
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=6.8e-12 Score=95.19 Aligned_cols=78 Identities=22% Similarity=0.311 Sum_probs=66.4
Q ss_pred eEEEecCCCCCCHHHHHHhhhccCCeeEEEEecCCCCCcccEEEEEeCCH-HHHHHHHHHHcCCCcCCCCcceEEEEecC
Q 013840 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETK-EQALAALEAINGKHKMEGSSVPLVVKWAD 182 (435)
Q Consensus 104 ~l~v~~lp~~~t~~~l~~~f~~~g~i~~v~~~~~~~~~~~g~afV~f~~~-e~a~~a~~~l~~~~~~~g~~~~l~v~~a~ 182 (435)
.+||+|||..+|+++|+++|+.||+|..|.++.+ +|+|||+|.+. ++|..|+..+++.. +.++.+.+.+.+..
T Consensus 13 ~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~-----kg~gfV~F~~~~~~A~~a~~~~~~~~-l~~~~~~v~~~~~~ 86 (113)
T d1owxa_ 13 LKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG-----AKEGIILFKEKAKEALGKAKDANNGN-LQLRNKEVTWEVLE 86 (113)
T ss_dssp EEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT-----CSEEEEEESSCHHHHHHHHHHTTTSC-BCTTSSSEEEEECC
T ss_pred EEEECCCCCCCCHHHHHHHHHhcCChheEEEecC-----CceEEEEecCcHHHHHHHHHHhcCCc-eecCceEEEEeecc
Confidence 4699999999999999999999999999999865 78999999985 78999999999876 55666667777766
Q ss_pred CHHHH
Q 013840 183 TEKER 187 (435)
Q Consensus 183 ~~~~~ 187 (435)
...+.
T Consensus 87 ~~~e~ 91 (113)
T d1owxa_ 87 GEVEK 91 (113)
T ss_dssp HHHHH
T ss_pred chhhH
Confidence 55544
No 169
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=2.1e-13 Score=101.77 Aligned_cols=73 Identities=14% Similarity=0.257 Sum_probs=65.5
Q ss_pred eEEEecCCCCCCHHHHHHhhhccCCeeEEEEecCCCCCcccEEEEEeCCHHHHHHHHHHHcCCCcCCCCcceEE
Q 013840 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177 (435)
Q Consensus 104 ~l~v~~lp~~~t~~~l~~~f~~~g~i~~v~~~~~~~~~~~g~afV~f~~~e~a~~a~~~l~~~~~~~g~~~~l~ 177 (435)
.++|++++.++++++|+++|++||+|.+|.|+++.+++++|+|||+|.+.++|.+|++.|||.. ++|+.+.+.
T Consensus 29 ~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~-~~gr~i~v~ 101 (104)
T d1jmta_ 29 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW-FNGQPIHAE 101 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCE-ETTEECCEE
T ss_pred hHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCE-ECCEEEEEE
Confidence 4667788888999999999999999999999988899999999999999999999999999986 888874443
No 170
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.23 E-value=1.1e-11 Score=87.35 Aligned_cols=73 Identities=14% Similarity=0.115 Sum_probs=56.6
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCCcCCCCCCceeee
Q 013840 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVK 92 (435)
Q Consensus 13 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~~~~~~~~~~i~~~ 92 (435)
+.+.|+|.|+|++.+++ +.+.|+.||.|.++++. +.+|||||+|.+.++|++||+ +||.. +.|+ ..+.++
T Consensus 3 ~~~wV~V~G~p~~~~~~-il~~F~~~G~I~~~~~~------~~~~~~fV~f~~~~~A~~Al~-~nG~~-~~g~-~~vgV~ 72 (81)
T d1wwha1 3 DDTWVTVFGFPQASASY-ILLQFAQYGNILKHVMS------NTGNWMHIRYQSKLQARKALS-KDGRI-FGES-IMIGVK 72 (81)
T ss_dssp GGGEEEEECCCGGGHHH-HHHHHHTTSCEEEEEEC------SSSSEEEEEESSHHHHHHHHT-TTTCE-ETTT-EECEEE
T ss_pred cccEEEEECCChHHHHH-HHHHHHhhhhhheEEec------CCCCEEEEEEcccHHHHHHHh-cCCCe-ECCc-EEEEEE
Confidence 46789999999999865 55679999999998863 446799999999999999995 88875 4431 234555
Q ss_pred ccC
Q 013840 93 YAD 95 (435)
Q Consensus 93 ~~~ 95 (435)
...
T Consensus 73 ~~~ 75 (81)
T d1wwha1 73 PCI 75 (81)
T ss_dssp ECC
T ss_pred eCC
Confidence 443
No 171
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1.5e-11 Score=90.65 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=67.1
Q ss_pred cCccCCceEEEecC--CCCCC---------HHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhc
Q 013840 9 KSSEERVKLFVGQV--PKHMT---------EAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACH 77 (435)
Q Consensus 9 ~~~~~~~~l~v~nL--p~~~t---------~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~ 77 (435)
...+.+++|+|+|| |.++. .++|++.|++||.|..+++..+. .+|+|||+|.+.++|.+|++.||
T Consensus 3 ~~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~----~~G~~fV~f~~~e~A~~A~~~ln 78 (99)
T d2dita1 3 SRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRH----PDGVASVSFRDPEEADYCIQTLD 78 (99)
T ss_dssp CCCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTC----TTCEEEEECSCHHHHHHHHHHST
T ss_pred CCCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCC----CccEEEEEECCHHHHHHHHHHhC
Confidence 45678899999999 65432 36799999999999999876543 56899999999999999999999
Q ss_pred CCCcCCCCCCceeeeccCch
Q 013840 78 NKKTLPGASSPLQVKYADGE 97 (435)
Q Consensus 78 ~~~~~~~~~~~i~~~~~~~~ 97 (435)
|.. +.| +.|.+.+..+.
T Consensus 79 g~~-~~g--r~i~v~~~~g~ 95 (99)
T d2dita1 79 GRW-FGG--RQITAQAWDGT 95 (99)
T ss_dssp TCE-ETT--EECEEEECCSC
T ss_pred CcE-ECC--EEEEEEEeCCc
Confidence 986 444 88988887653
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.17 E-value=2.3e-11 Score=90.72 Aligned_cols=82 Identities=18% Similarity=0.257 Sum_probs=66.9
Q ss_pred cCCceEEEecC--CCCC--------CHHHHHHHHhccCceeEEEEEecCCC--CCccceEEEEeCCHHHHHHHHHHhcCC
Q 013840 12 EERVKLFVGQV--PKHM--------TEAQLLAMFKEFALVDEVNIIKDKTT--RASRGCCFVICPSRQEADKAVNACHNK 79 (435)
Q Consensus 12 ~~~~~l~v~nL--p~~~--------t~~~l~~~f~~~g~i~~~~~~~~~~~--~~~~g~afV~f~~~e~a~~al~~l~~~ 79 (435)
.++++|.|+|| |... ..+||++.|++||.|.+|+|.++..+ ....|++||+|.+.++|.+|++.|||.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 57899999999 5443 23578999999999999998876543 345689999999999999999999998
Q ss_pred CcCCCCCCceeeeccCc
Q 013840 80 KTLPGASSPLQVKYADG 96 (435)
Q Consensus 80 ~~~~~~~~~i~~~~~~~ 96 (435)
. +.| +.|.+.+.+.
T Consensus 82 ~-f~g--R~v~v~f~~~ 95 (104)
T d1o0pa_ 82 K-FAN--RVVVTKYCDP 95 (104)
T ss_dssp C-SSS--SCCEEEEECH
T ss_pred E-ECC--eEEEEEEcCH
Confidence 6 444 8888887754
No 173
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.41 E-value=6.8e-07 Score=57.97 Aligned_cols=62 Identities=26% Similarity=0.288 Sum_probs=54.0
Q ss_pred HHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCceeCCeEEEEEEcc
Q 013840 363 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 427 (435)
Q Consensus 363 ~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l~gr~i~v~~a~ 427 (435)
.+.|.+.|+++|.|.++.|.... +|.. .|-|...+.++|..|+..||.+++++++|.|+++.
T Consensus 10 qq~L~~~f~~h~~V~sv~l~~~~-dg~~--~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 10 QQLLQEAFARHGKVKSVELSPHT-DYQL--KAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHHSCEEEEEECSCC-STTC--CEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHHhheeEEEEEEEecc-CCcE--EEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 35677789999999999997663 4544 59999999999999999999999999999999975
No 174
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.81 E-value=5.1e-05 Score=52.85 Aligned_cols=72 Identities=11% Similarity=0.154 Sum_probs=59.3
Q ss_pred ceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCcc--ceEEEEeCCHHHHHHHHHHhcCCCcCCCCC
Q 013840 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASR--GCCFVICPSRQEADKAVNACHNKKTLPGAS 86 (435)
Q Consensus 15 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~--g~afV~f~~~e~a~~al~~l~~~~~~~~~~ 86 (435)
++|.||.||+..|++++.+.++..|.+.....+..+.+.+.. .-|||.|.+.+++....+..+|..+.+..+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g 75 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKG 75 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTC
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCC
Confidence 589999999999999999999999988877766655443322 369999999999999999999887766543
No 175
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.66 E-value=6.7e-05 Score=51.16 Aligned_cols=73 Identities=16% Similarity=0.353 Sum_probs=58.2
Q ss_pred cCCCCceEEEeCCCCCCC---------HHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCce
Q 013840 345 EGPPGANLFIYHIPQEFG---------DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 415 (435)
Q Consensus 345 ~~~~~~~v~V~nLp~~~t---------~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~ 415 (435)
.+|+.-||.|.=...... -.+|.+.|..||+|+=|++..+ --+|.|.+-+.|.+|+. ++|.+
T Consensus 11 qGPpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~-l~g~~ 81 (95)
T d1ufwa_ 11 QGPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVLD-VDGMK 81 (95)
T ss_dssp CCCTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHHH-GGGSE
T ss_pred cCCCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHhc-cCCeE
Confidence 455667888854432222 2478899999999999998755 48999999999999998 59999
Q ss_pred eCCeEEEEEEc
Q 013840 416 LGGKKLKVQLK 426 (435)
Q Consensus 416 l~gr~i~v~~a 426 (435)
+.|+.|+|...
T Consensus 82 v~G~~l~It~~ 92 (95)
T d1ufwa_ 82 VKGRAVKISGP 92 (95)
T ss_dssp ETTEEEEEECC
T ss_pred EcceEEEEecC
Confidence 99999999864
No 176
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.33 E-value=0.00051 Score=47.66 Aligned_cols=80 Identities=13% Similarity=0.281 Sum_probs=61.6
Q ss_pred ceEEEecCCCCCCHHHHHHhhhccCCeeEEEEecCC-C-CC-cccEEEEEeCCHHHHHHHHHHHcCCCcCCCCcc--eEE
Q 013840 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-Q-QT-SKGCAFLKYETKEQALAALEAINGKHKMEGSSV--PLV 177 (435)
Q Consensus 103 ~~l~v~~lp~~~t~~~l~~~f~~~g~i~~v~~~~~~-~-~~-~~g~afV~f~~~e~a~~a~~~l~~~~~~~g~~~--~l~ 177 (435)
++|.||.||+.+|++++.+.++..|.+.-......+ + +. .-.-|||.|.+.++.....+..+|..+++.+.. +-.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 368899999999999999999988888776665543 1 21 237899999999999999999999877765543 223
Q ss_pred EEecC
Q 013840 178 VKWAD 182 (435)
Q Consensus 178 v~~a~ 182 (435)
|.+|.
T Consensus 82 VE~AP 86 (91)
T d1uw4a_ 82 VEFAP 86 (91)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 44443
No 177
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.37 E-value=0.0087 Score=41.29 Aligned_cols=60 Identities=22% Similarity=0.370 Sum_probs=50.6
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhc
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACH 77 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~ 77 (435)
.......||.-..|..+...||.++|+.||.|. |..+.|- .|||...+.|+|+.++..++
T Consensus 11 ~~p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~-VswIddT-------Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 11 LQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQ-ISWIDDT-------SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCCCCSEEEEECCTTCCHHHHHHHHTTTCSCC-CEEEETT-------EEEEECSCHHHHHHHHHHHH
T ss_pred CCCCcceeEEEeCCcccchhHHHHHhcCCCceE-EEEecCc-------eEEEEecCHHHHHHHHHHhc
Confidence 344556788899999999999999999999877 6666553 89999999999999988764
No 178
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.36 E-value=0.007 Score=38.85 Aligned_cols=60 Identities=15% Similarity=0.257 Sum_probs=47.7
Q ss_pred HHHHHhhhccCCeeEEEEecCCCCCcccEEEEEeCCHHHHHHHHHHHcCCCcCCCCcceEEEEec
Q 013840 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181 (435)
Q Consensus 117 ~~l~~~f~~~g~i~~v~~~~~~~~~~~g~afV~f~~~e~a~~a~~~l~~~~~~~g~~~~l~v~~a 181 (435)
+-|.+.|.+++.|.++.+....++. -.|-|...+..+|..|+..|+... ++++. +.|+++
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~dg~--~~A~V~v~~~q~A~~~v~~LhR~K-iG~KR--I~Vs~~ 70 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTDYQ--LKAVVQMENLQDAIGAVNSLHRYK-IGSKK--ILVSLA 70 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCSTT--CCEEEEESSHHHHHHHHHHHTTEE-ETTEE--EEEEEC
T ss_pred HHHHHHHHhheeEEEEEEEeccCCc--EEEEEEcCCHHHHHHHHHHHHHHh-cCCeE--EEEEEe
Confidence 3456788999999999997766554 478999999999999999999876 55543 666654
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.94 E-value=0.016 Score=39.95 Aligned_cols=58 Identities=28% Similarity=0.440 Sum_probs=46.5
Q ss_pred CCCceEEEeCCCCCCCHHHHHHHhhcCCcEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcC
Q 013840 347 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 412 (435)
Q Consensus 347 ~~~~~v~V~nLp~~~t~~~L~~~F~~fG~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~ 412 (435)
+...-||.-..|..|...||.++|+.||.|.=-.| .+ + -|||...++++|+.++..+.
T Consensus 13 p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-dd--T-----Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 13 PKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-DD--T-----SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-ET--T-----EEEEECSCHHHHHHHHHHHH
T ss_pred CCcceeEEEeCCcccchhHHHHHhcCCCceEEEEe-cC--c-----eEEEEecCHHHHHHHHHHhc
Confidence 34566788889999999999999999998754444 22 2 59999999999998887543
No 180
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.78 E-value=0.0057 Score=41.46 Aligned_cols=50 Identities=26% Similarity=0.510 Sum_probs=42.6
Q ss_pred HHHHHhhhccCCeeEEEEecCCCCCcccEEEEEeCCHHHHHHHHHHHcCCCcCCCCcce
Q 013840 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175 (435)
Q Consensus 117 ~~l~~~f~~~g~i~~v~~~~~~~~~~~g~afV~f~~~e~a~~a~~~l~~~~~~~g~~~~ 175 (435)
.+|.+.|..||+|.-+++..+ ..+|+|.+-+.|-.|++ +++.+ +.|+.+.
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d-------~mwVTF~dG~SAL~al~-l~g~~-v~G~~l~ 88 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQG-------QMLVTFADSHSALSVLD-VDGMK-VKGRAVK 88 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETT-------EEEEECSCSHHHHHHHH-GGGSE-ETTEEEE
T ss_pred HHHHHHHhhCCeEEEEEEeCC-------eEEEEECCcHHHHHHhc-cCCeE-EcceEEE
Confidence 578899999999999999866 78999999999999997 78877 6777643
No 181
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=43.28 E-value=23 Score=24.72 Aligned_cols=40 Identities=20% Similarity=0.371 Sum_probs=29.3
Q ss_pred HHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhc
Q 013840 29 AQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACH 77 (435)
Q Consensus 29 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~ 77 (435)
.++++.+..+|. ++| || +...+|..|.+.++|..+.+.+.
T Consensus 60 ~~~~~~L~~~g~---~~M-----SG-SGstvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 60 DAVLSWLLEYAP---SRL-----TG-TGACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHHTTTSC---EEE-----CT-TSSCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHHhhccc---cee-----cC-CCCEEEEEeCCHHHHHHHHHHcC
Confidence 455667777775 344 22 33489999999999999998874
No 182
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=41.05 E-value=37 Score=21.60 Aligned_cols=52 Identities=10% Similarity=0.070 Sum_probs=35.5
Q ss_pred CCHHHHHHhhhccC-CeeEEEEecCCCCCcccEEEEEeCC--HHHHHHHHHHHcC
Q 013840 114 VSEAEVSALFSIYG-TIKDLQILRGSQQTSKGCAFLKYET--KEQALAALEAING 165 (435)
Q Consensus 114 ~t~~~l~~~f~~~g-~i~~v~~~~~~~~~~~g~afV~f~~--~e~a~~a~~~l~~ 165 (435)
=.--++.+.|..+| .++.|.-...+.......-||+|+- .+...+|++.+..
T Consensus 14 GaL~~vL~~F~~~~INLt~IeSRP~~~~~~~Y~F~id~~g~~~~~~~~~l~~L~~ 68 (80)
T d2qmwa2 14 GLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILET 68 (80)
T ss_dssp THHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEESCCSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCEEEEEeeecCCCCceEEEEEEEecCCcHHHHHHHHHHHH
Confidence 34567888999998 6777776655444445566788843 4567788888765
No 183
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=40.31 E-value=37 Score=23.32 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=31.7
Q ss_pred HHHHHHHhccCceeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCC
Q 013840 29 AQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNK 79 (435)
Q Consensus 29 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~~~e~a~~al~~l~~~ 79 (435)
.++++.+.++|... +.| +| +-...|..|.+.++|+++.+.+...
T Consensus 66 ~~~~~~l~~~g~~~-~~m-----SG-SGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLM-----SG-SGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEE-----CT-TSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eee-----cC-CCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 55677777787533 444 22 3348999999999999999988653
No 184
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=36.59 E-value=43 Score=20.64 Aligned_cols=58 Identities=9% Similarity=0.027 Sum_probs=40.5
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCC-cEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCcee
Q 013840 352 LFIYHIPQEFGDQELGNAFQAFG-RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416 (435)
Q Consensus 352 v~V~nLp~~~t~~~L~~~F~~fG-~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l 416 (435)
|+|.|-|.. -.++.+.|++.| .|.++...... .++.-.+...+++.|..+++. +|..+
T Consensus 4 V~v~d~pG~--L~~v~~~L~~~~InI~~~y~~~~~----~~~~~vl~vdd~~~a~~~L~~-~G~~v 62 (71)
T d2f06a1 4 ISCPNVPGA--LAKVLGFLSAEGVFIEYMYSFANN----NVANVVIRPSNMDKCIEVLKE-KKVDL 62 (71)
T ss_dssp EEEESSTTH--HHHHHHHHHHTTCCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHH-TTCEE
T ss_pred EEecCCccH--HHHHHHHHHHCCCCEEEEEEEcCC----CcEEEEEEECCHHHHHHHHHH-CCCEE
Confidence 566665544 345778888877 68888877653 244555666899999999987 77754
No 185
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=35.37 E-value=46 Score=20.54 Aligned_cols=59 Identities=10% Similarity=0.019 Sum_probs=43.0
Q ss_pred eEEEeCCCCCCCHHHHHHHhhcCC-cEEEEEEEeeCCCCCcceEEEEEeCCHHHHHHHHHhcCCcee
Q 013840 351 NLFIYHIPQEFGDQELGNAFQAFG-RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 416 (435)
Q Consensus 351 ~v~V~nLp~~~t~~~L~~~F~~fG-~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~l 416 (435)
.|||.|=|-. -.++..+|++-| .|.++.+....+ .|.--+...+++.|...++. +|+.+
T Consensus 7 sV~~eNkpG~--L~~v~~~~~~~~inI~sl~v~~t~~----~~i~Riiv~~~e~a~~~L~~-~g~~v 66 (70)
T d2f06a2 7 SIFLENKSGR--LTEVTEVLAKENINLSALCIAENAD----FGILRGIVSDPDKAYKALKD-NHFAV 66 (70)
T ss_dssp EEEECSSSSH--HHHHHHHHHHTTCCEEEEEEEECSS----CEEEEEEESCHHHHHHHHHH-TTCCE
T ss_pred EEEEeCCCcH--HHHHHHHHHHCCCCEEEEEEeecCC----CCEEEEEECChHHHHHHHHH-CCCEE
Confidence 6888887755 467889998888 788888865532 24444566899999998887 66654
No 186
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.66 E-value=76 Score=19.71 Aligned_cols=61 Identities=8% Similarity=0.059 Sum_probs=44.7
Q ss_pred CccCCceEEEecCCCCCCHHHHHHHHhccCceeEEEEEecCCCCCccceEEEEeC----CHHHHHHHHHHh
Q 013840 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP----SRQEADKAVNAC 76 (435)
Q Consensus 10 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afV~f~----~~e~a~~al~~l 76 (435)
......+|.|.|+.=..=...|++.+.....|.++.+- ...+.+-|.|. +.++..++|+.+
T Consensus 5 ~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~------~~~~~v~v~~d~~~~~~~~i~~~i~~~ 69 (79)
T d1kvja_ 5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVS------LEEKNATIIYDPKLQTPKTLQEAIDDM 69 (79)
T ss_dssp TTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEE------TTTTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred CCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEE------CCCCEEEEEECCCCCCHHHHHHHHHhc
Confidence 34556789999996665568899999998778877762 23347889984 667777777765
No 187
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=24.56 E-value=53 Score=22.59 Aligned_cols=41 Identities=20% Similarity=0.374 Sum_probs=30.0
Q ss_pred HHHHHhhhccCCeeEEEEecCCCCCcccEEEEEeCCHHHHHHHHHHHcC
Q 013840 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAING 165 (435)
Q Consensus 117 ~~l~~~f~~~g~i~~v~~~~~~~~~~~g~afV~f~~~e~a~~a~~~l~~ 165 (435)
.++++.+..+|. +.| . | +...+|..|++.++|..+.+.+..
T Consensus 60 ~~~~~~L~~~g~---~~M-S---G-SGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAP---SRL-T---G-TGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSC---EEE-C---T-TSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhccc---cee-c---C-CCCEEEEEeCCHHHHHHHHHHcCc
Confidence 456777778885 233 2 2 345789999999999999998753
No 188
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=23.53 E-value=16 Score=19.05 Aligned_cols=13 Identities=31% Similarity=0.749 Sum_probs=11.0
Q ss_pred CHHHHHHHhhcCC
Q 013840 362 GDQELGNAFQAFG 374 (435)
Q Consensus 362 t~~~L~~~F~~fG 374 (435)
++++|++.|..|.
T Consensus 1 seeel~eAF~~FD 13 (33)
T d2hf5a1 1 SEEEIREAFRVFD 13 (33)
T ss_dssp CHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHhC
Confidence 5789999999884
Done!