BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013841
(435 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana
GN=FLA2 PE=1 SV=1
Length = 403
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/405 (58%), Positives = 306/405 (75%), Gaps = 11/405 (2%)
Query: 36 RPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTI 95
R T +L+F L + L + S+AHNITRILAK P+FSTFNHYL+ THLA EINRRQTI
Sbjct: 5 RRAATALVLIFQLHLFL---SLSNAHNITRILAKDPDFSTFNHYLSATHLADEINRRQTI 61
Query: 96 TVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGS 155
TVLA+DNSAMSS+LS S+Y +RN+LSLHVL DYFG+KKLHQIT+G+ T+SMFQ+TGS
Sbjct: 62 TVLAVDNSAMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGS 121
Query: 156 APGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEA 215
A G+SGY+N+TD+KGGKV FG +D+D KL A YVKSV E PYNISVL ISQVL S EAEA
Sbjct: 122 ATGTSGYINITDIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPEAEA 181
Query: 216 PTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKY 275
PT PS L LT I+ KQGCKAF+D+L +TGA TF++ +DGGLTVFCP+D+ V FMPK+
Sbjct: 182 PTASPSDLILTTILEKQGCKAFSDILKSTGADKTFQDTVDGGLTVFCPSDSAVGKFMPKF 241
Query: 276 KNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTK 335
K+L+ A+K +L+LYHG PVYQSLQ L+S NG +NTLAT+G +K+DFTVQNDGE VTL+T
Sbjct: 242 KSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLATEGNNKFDFTVQNDGEDVTLETD 301
Query: 336 ATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEA 395
TAK+ GTLKD+EPL++YKI+KVLLP E++K + + + + D D A
Sbjct: 302 VVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTSAPAPKSSKKKPKNAEADADGPSA 361
Query: 396 DAPVDDSEDQTADNENG-----VGRISGGHLIWMVLSSCMGIFFI 435
DAP DD + + AD++NG + R S +++ ++ C G++ +
Sbjct: 362 DAPSDD-DVEVADDKNGAVSAMITRTS--NVVTAIVGLCFGVWLM 403
>sp|Q9FM65|FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana
GN=FLA1 PE=1 SV=1
Length = 424
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/314 (60%), Positives = 246/314 (78%), Gaps = 3/314 (0%)
Query: 55 STTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLS 114
+T +HAHN+TR+LA HP FS+F+H+LT THLA EINRR+TITV A+DN+AMS+L SK +
Sbjct: 19 TTQTHAHNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSALTSKGYT 78
Query: 115 VYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVG 174
+ TL+N+LSLHVL DYFG+KKLHQI +G+AL +++FQATG+APG+SG+VN+TDL+GGKVG
Sbjct: 79 LSTLKNILSLHVLLDYFGTKKLHQIRDGSALAATLFQATGAAPGTSGFVNITDLRGGKVG 138
Query: 175 FGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGC 234
FG + D L + +VKS+ E PYNIS++QIS+VL S+ A APTP P+ +NLT IM+ GC
Sbjct: 139 FGPDGGD--LSSFFVKSIEEVPYNISIIQISRVLPSETAAAPTPAPAEMNLTGIMSAHGC 196
Query: 235 KAFAD-LLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTP 293
K FA+ LL GA T++E+L+GG+TVFCP D + F+PKYKNLT K + L + P
Sbjct: 197 KVFAETLLTNPGASKTYQESLEGGMTVFCPGDDAMKGFLPKYKNLTAPKKEAFLDFLAVP 256
Query: 294 VYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVI 353
Y S+ LKS+NG MNTLATDGA+K++ TVQNDGE VTLKT+ T KI TL DE+PL I
Sbjct: 257 TYYSMAMLKSNNGPMNTLATDGANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAI 316
Query: 354 YKINKVLLPIELFK 367
Y +KVLLP ELFK
Sbjct: 317 YATDKVLLPKELFK 330
>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana
GN=FLA8 PE=1 SV=1
Length = 420
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 242/395 (61%), Gaps = 24/395 (6%)
Query: 40 TTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLA 99
T +LL F +L +ST S +HNIT+ILA P++S+FN YL+ T LA EIN R TITVL
Sbjct: 6 TFSLLAFTFSLLAFASTVS-SHNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLV 64
Query: 100 LDNSAMSSLLSKQ-LSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPG 158
L+N AMS+L K LSV +++ LSL VL DY+ +KLH+I+ GT L+++++Q TG+APG
Sbjct: 65 LNNGAMSALAGKHPLSV--IKSALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTTGNAPG 122
Query: 159 SSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQI-SQVLNSDEAEAPT 217
+ G+VN+TDLKGGKVGFG+ + KLD++Y KSV + PYNIS+L+I + ++ AP
Sbjct: 123 NLGFVNITDLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPGVLTAPA 182
Query: 218 PGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTD-AVVNDFMPKYK 276
P S N+T ++ K GCK FA+LL+++G T+E ++ GLTVF P+D A + +P
Sbjct: 183 PSASLSNITGLLEKAGCKTFANLLVSSGVLKTYESAVEKGLTVFAPSDEAFKAEGVPDLT 242
Query: 277 NLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKA 336
LT+A VSLL YH Y+ +LK++ ++TLAT+GA K+D T G+ V L T
Sbjct: 243 KLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDEVILHTGV 302
Query: 337 TTAKITGTLKDEEPLVIYKINKVLLPIELFKPE-------VETEAPAPAPTP-------- 381
+++ T+ D P+VI+ ++ VLLP ELF AP P+P
Sbjct: 303 APSRLADTVLDATPVVIFTVDNVLLPAELFGKSKSPSPAPAPEPVTAPTPSPADAPSPTA 362
Query: 382 ---HKRKTKKDKDEAEADAPVDDSEDQTADNENGV 413
T + + A +D+P + ++A+ GV
Sbjct: 363 ASPPAPPTDESPESAPSDSPTGSANSKSANAAVGV 397
>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana
GN=FLA10 PE=1 SV=1
Length = 422
Score = 281 bits (719), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 237/362 (65%), Gaps = 13/362 (3%)
Query: 43 LLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDN 102
L F L +L ++ST S HNIT+IL+ PE+S+FN+YL+ T LA EIN R TITVL L+N
Sbjct: 9 LFAFTLSLLTVASTVS-GHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVLVLNN 67
Query: 103 SAMSSLLSKQ-LSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSG 161
AMSSL K LSV ++N LSL VL DY+ KLHQ++ GT LT++++Q TG A G+ G
Sbjct: 68 GAMSSLAGKHPLSV--VKNALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTTGHALGNLG 125
Query: 162 YVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQI-SQVLNSDEAEAPTPGP 220
+VNVTDLKGGKVGFG+ KLD++Y KSV + PYNISVL+I + ++ AP P
Sbjct: 126 FVNVTDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEINAPIIAPGILTAPAPSS 185
Query: 221 SGL-NLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTD-AVVNDFMPKYKNL 278
+G+ N+T ++ K GCK FA+LL+++G TFE ++ GLTVF P+D A +P NL
Sbjct: 186 AGVSNITGLLEKAGCKTFANLLVSSGVIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNL 245
Query: 279 TEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATT 338
T+A VSLL YH Y+ +LK++ ++TLAT+GA KYD T G+ V L T
Sbjct: 246 TQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGDEVILHTGVGP 305
Query: 339 AKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEADAP 398
+++ T+ DE P+VI+ ++ VLLP ELF ++ +PAPAP P T A++ +P
Sbjct: 306 SRLADTVVDETPVVIFTVDNVLLPAELFG---KSSSPAPAPEPVSAPTPT---PAKSPSP 359
Query: 399 VD 400
V+
Sbjct: 360 VE 361
>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana
GN=FLA4 PE=1 SV=1
Length = 420
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 177/343 (51%), Gaps = 31/343 (9%)
Query: 62 NITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSL---LSKQLSVYTL 118
N+T +L+ P S+F++ L + +AAE++ R ++T+LA+ NS SS L+++L L
Sbjct: 30 NVTAVLSSFPNLSSFSNLLVSSGIAAELSGRNSLTLLAVPNSQFSSASLDLTRRLPPSAL 89
Query: 119 RNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVT-DLKGGKVGFGA 177
++L HVL + L +I + +++++A+G SG VNVT D G V G+
Sbjct: 90 ADLLRFHVLLQFLSDSDLRRIPPSGSAVTTLYEASGRTFFGSGSVNVTRDPASGSVTIGS 149
Query: 178 EDNDGKLDATYVKSVAEFPYNISVLQISQV-------LNSDEAEAP-------TPGPSGL 223
+ T +K + P NI+VL + + + + E P +P P+G+
Sbjct: 150 PATK---NVTVLKLLETKPPNITVLTVDSLIVPTGIDITASETLTPPPTSTSLSPPPAGI 206
Query: 224 NLTAIMAK-QGCKAFADLLIATGAHTTFEENLDG-GLTVFCPTDAVVNDFMPKYKNLTE- 280
NLT I+ LL+A+G T FE + G G+TVF PTD+ +D +P NL
Sbjct: 207 NLTQILINGHNFNVALSLLVASGVITEFENDERGAGITVFVPTDSAFSD-LPSNVNLQSL 265
Query: 281 --AHKVSLLLYHGTPVYQSLQTLKS-SNGVMNTLATD--GASKYDFTVQN-DGEIVTLKT 334
K +L +H Y +L +L+S +N V TLAT+ GA Y + +G IVT+ +
Sbjct: 266 PAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTINS 325
Query: 335 KATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAP 377
A +T T D+ P+ ++ ++KVLLP ELF + A AP
Sbjct: 326 GVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFPKSGQPVATAP 368
>sp|Q9LTW9|FLA14_ARATH Fasciclin-like arabinogalactan protein 14 OS=Arabidopsis thaliana
GN=FLA14 PE=2 SV=1
Length = 255
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 101/156 (64%), Gaps = 2/156 (1%)
Query: 56 TTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSV 115
T+S++ NIT IL +H +FS FN L+ T LA+ IN+RQTITVL + N A+SSL + SV
Sbjct: 19 TSSNSFNITNILNEHDDFSNFNQLLSETQLASTINKRQTITVLVVSNGALSSLSGQPTSV 78
Query: 116 YTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGF 175
++ +LSLH++ DY+ KKL ++ T L +++FQ++G A G G++N T +K G V F
Sbjct: 79 --IKKILSLHIVLDYYDQKKLKNLSKKTVLLTTLFQSSGLARGQQGFLNATVMKNGDVAF 136
Query: 176 GAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSD 211
G+ LDA +VA P+NISVL IS + D
Sbjct: 137 GSAVPGSSLDAQLQDTVAALPFNISVLHISSAIMID 172
>sp|Q9ZQ23|FLA3_ARATH Fasciclin-like arabinogalactan protein 3 OS=Arabidopsis thaliana
GN=FLA3 PE=2 SV=1
Length = 280
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 3/161 (1%)
Query: 45 LFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSA 104
L L +LL S+ A NITR+L K+PEFST L T L IN+RQTITVLAL+N A
Sbjct: 9 LLCLTILLAVSSIVSAVNITRVLEKYPEFSTMTELLAKTELTPIINKRQTITVLALNNDA 68
Query: 105 MSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVN 164
+ S+ + ++N+L HV+ DYF KL + + L ++++Q+TG +G++N
Sbjct: 69 IGSISGRPEE--EVKNILMNHVVLDYFDELKLKALKEKSTLLTTLYQSTGLGQQQNGFLN 126
Query: 165 VTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQIS 205
T GK+ FG+ A Y+ +V PYN+SV+QIS
Sbjct: 127 CTK-SNGKIYFGSGVKGAPQTAEYITTVFRNPYNLSVVQIS 166
>sp|O49586|FLA5_ARATH Fasciclin-like arabinogalactan protein 5 OS=Arabidopsis thaliana
GN=FLA5 PE=2 SV=1
Length = 278
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 3/146 (2%)
Query: 60 AHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLR 119
A+NIT K+ +FST T L A I++ QTITVLA+ N A+SS+ ++ S LR
Sbjct: 24 ANNITLAFQKYSKFSTMRDLFIKTKLIAAIDKYQTITVLAVSNDAISSITNR--SEVELR 81
Query: 120 NVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAED 179
N+L HV+ DY+ KL + + + ++++Q TG +G++NV+ K G+V FG+E
Sbjct: 82 NILMTHVILDYYDELKLQGMREKSIMLTTLYQTTGLGEQMNGFLNVSKSK-GRVYFGSEV 140
Query: 180 NDGKLDATYVKSVAEFPYNISVLQIS 205
+ L+A YV +V PYN+S++QI+
Sbjct: 141 KNSPLNAEYVSTVYHNPYNLSIIQIT 166
>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana
GN=FLA11 PE=2 SV=2
Length = 246
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 207 VLNSDEAEAPTPGPSG-LNLTAIMAKQG-CKAFADLLIATGA----HTTFEENLDGGLTV 260
V+ + +AP PGPSG N+TAI+ K G F LL +T A +T + GLTV
Sbjct: 18 VIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTV 77
Query: 261 FCPTDAVVNDFMPKYKN-LTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGAS-K 318
F PTD N N L++ KV L+ +H P ++ ++ + + T A DG + K
Sbjct: 78 FAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGK 137
Query: 319 YDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPA 378
+ + + G V + T +A + ++ ++ L +Y++++VLLP+ +F V APAPA
Sbjct: 138 FPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSV---APAPA 194
Query: 379 P 379
P
Sbjct: 195 P 195
>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana
GN=FLA6 PE=2 SV=2
Length = 247
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 112/243 (46%), Gaps = 18/243 (7%)
Query: 199 ISVLQISQVLNSDEAEAPTPGPSGLNLTAIM-AKQGCKAFADLLIAT--GAHTTFEENL- 254
I + I + + A APT S +NLTAI+ A LL T G + + N
Sbjct: 13 IFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSS 72
Query: 255 DGGLTVFCPTDAVVNDFMPKYKN-LTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLAT 313
D G+T+F PTD N P N LT ++ L+LYH P Y SL L ++ + T AT
Sbjct: 73 DQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQAT 132
Query: 314 D---GASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEV 370
G +FT Q V + T +I L+ + PL +Y ++ VLLP ELF +
Sbjct: 133 GQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKT 192
Query: 371 ETEAPAPAPTPHKRKTKKDKDEAEADAPVDDSEDQTADNENGVGRISGGHLIWMVLSSCM 430
T APAP K ++AD+P D E ++A + V R S G ++ L C
Sbjct: 193 -TPTGAPAP-------KSSTSSSDADSPAADDEHKSAGSS--VKRTSLGIVVSFALFCCS 242
Query: 431 GIF 433
I+
Sbjct: 243 VIY 245
>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana
GN=FLA9 PE=1 SV=1
Length = 247
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 223 LNLTAIMAKQG-CKAFADLLIAT--GAHTTFEENLDG-GLTVFCPTDAVVNDFMPKYKN- 277
+NLTAI+ K G F LL T G+ + N G+TVF PTD + P N
Sbjct: 38 INLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQ 97
Query: 278 LTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLAT---DGASKYDFTVQNDGEIVTLKT 334
L+ +V L+LYH +P Y S+ L S + + T A+ +G +FT Q + + + T
Sbjct: 98 LSPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQ--INVST 155
Query: 335 KATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAE 394
+I+ +L+ + PL +Y ++ VLLP E+F E + APAP K K+ D++
Sbjct: 156 GYVETRISNSLRQQRPLAVYVVDMVLLPGEMFG-EHKLSPIAPAP---KSKSGGVTDDSG 211
Query: 395 ADAPVDDSEDQTADNENGVGRISGGHLIWMVL 426
+ D++ E VG G LI + L
Sbjct: 212 STKKAASPSDKSGSGEKKVGLGFGLGLIVLCL 243
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 62 NITRILAKHPEFSTFNHYLTVTHLAAEINRR-----QTITVLALDNSAMSSLLS---KQL 113
N+T IL K +F+TF H L +T + +++N + + +TV A ++A +L QL
Sbjct: 39 NLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQL 98
Query: 114 SVYTLRNVLSLHVLTDYFGSKKLHQITN 141
S ++ HV Y+ L ++N
Sbjct: 99 SPDDQVKLILYHVSPKYYSMDDLLSVSN 126
>sp|Q9FFH6|FLA13_ARATH Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana
GN=FLA13 PE=1 SV=1
Length = 247
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 223 LNLTAIMAKQGCKAFADLLIAT---GAHTTFEENLDG-GLTVFCPTDAVVNDFMPKYKN- 277
+N+TAI+ K G L+ T G + N G+TV PTD + P N
Sbjct: 35 INITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNK 94
Query: 278 LTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLAT--DGASKYDFTVQNDGEIVTLKTK 335
L+ +V L+LYH +P + +L+ L S + + T A+ D Y G V + T
Sbjct: 95 LSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTG 154
Query: 336 ATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEA 395
+++ +L+ E PL +Y ++ VLLP E+F E + AP P D + ++
Sbjct: 155 VVETRLSTSLRQERPLAVYVVDMVLLPEEMFG-ERKISPMAPPPKSKSPDVSDDSESSKK 213
Query: 396 DAPVDDSE 403
A +SE
Sbjct: 214 AAAPSESE 221
>sp|Q9SJ81|FLA7_ARATH Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana
GN=FLA7 PE=1 SV=1
Length = 254
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 223 LNLTAIMAKQG-CKAFADLLIATGAHTTFEE---NLDGGLTVFCPTD-AVVNDFMPKYKN 277
+NLT +++ G F D L++TG TF+ N + G+T+F P D A P N
Sbjct: 45 VNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSN 104
Query: 278 LTEAHKVSLLLYHGTPVYQSLQTLK--SSNGVMNTLATDGASKYDFTVQNDGEIVTLKTK 335
LT+ L+L+H P Y SL K S +G ++T A +Y + V + +
Sbjct: 105 LTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFA---GGQYSLKFTDVSGTVRIDSL 161
Query: 336 ATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEV 370
T K++ ++ +P+ +Y++N+VLLP +F +V
Sbjct: 162 WTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFGTDV 196
>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana
GN=FLA12 PE=2 SV=2
Length = 249
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 224 NLTAIMAKQG-CKAFADLLIATG-AHTTFEE--NLDGGLTVFCPTDAVVNDFMPKYKN-L 278
N+T I+ K G F LL +TG A+ + + N D G+T+F P+D+ N L
Sbjct: 39 NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSL 98
Query: 279 TEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGA-SKYDFTVQNDGEIVTLKTKAT 337
T+ +V L+ +H P Y S ++ + + T A D A + V G V + + T
Sbjct: 99 TDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVT 158
Query: 338 TAKITGTLKDEEPLVIYKINKVLLPIELF 366
++G + + L +Y+++KVLLP ++F
Sbjct: 159 NTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
>sp|P46070|TF3B_KLULA Transcription factor IIIB 70 kDa subunit OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TDS4 PE=3 SV=2
Length = 556
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%)
Query: 4 KPTHPLHSTPLHSTPLLVHKSTDTVTAAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNI 63
K TH + LH T +S D + ++E P NL L P LLS + H N+
Sbjct: 373 KATHGIDGEDLHKTEKDKKRSLDEIDGYSLEKDPYRPRNLHLLPTTASLLSKVSDHPENL 432
>sp|B8CW13|SMC_HALOH Chromosome partition protein Smc OS=Halothermothrix orenii (strain H
168 / OCM 544 / DSM 9562) GN=smc PE=3 SV=1
Length = 1185
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 62 NITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLS 114
N+TR E+S F +L VTH + +TI + ++ S +S L+S +LS
Sbjct: 1129 NVTRFARYIKEYSRFAQFLIVTHRKNMMAEAETIYGVTMEESGVSKLISLKLS 1181
>sp|O94659|NOG1_SCHPO Probable nucleolar GTP-binding protein 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=nog1 PE=1 SV=2
Length = 642
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 281 AHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFT--VQNDGEIVTLKTKATT 338
A+KV++L+ + + + + ++ T+ DG K T VQ+ G ++ ++T A
Sbjct: 280 ANKVTILVLNKIDAMRPEDLDQKNQELLQTIIDDGNVKVVQTSCVQDIG-VMDVRTTACE 338
Query: 339 AKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKD 391
A + + E+ L ++N VL I L +P E PA P KT++ D
Sbjct: 339 ALLAARV--EQKLKGSRVNNVLNRIHLAEPAARDEVARPACIPDSVKTRRAYD 389
>sp|Q8WWQ8|STAB2_HUMAN Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3
Length = 2551
Score = 32.7 bits (73), Expect = 6.3, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 62 NITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNV 121
N+ L + P++S F Y+ +LA I TV A +N+A+ + + ++ + +V
Sbjct: 1139 NLLMRLEQMPDYSIFRGYIIQYNLANAIEAADAYTVFAPNNNAIENYIREKKVLSLEEDV 1198
Query: 122 LSLHVLTD 129
L HV+ +
Sbjct: 1199 LRYHVVLE 1206
>sp|Q9K9M9|COXX_BACHD Protoheme IX farnesyltransferase OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=ctaB PE=3 SV=1
Length = 312
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 396 DAPVDDSEDQTADNENGVGRISGGHLIWM-VLSSCMGIFFI 435
D +D ++T D + GR SG H++W + S GIFF+
Sbjct: 93 DRDIDHLMERTKDRPSVTGRFSGQHILWTGFVQSAAGIFFL 133
>sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=1 SV=1
Length = 2571
Score = 32.3 bits (72), Expect = 7.5, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 15/190 (7%)
Query: 201 VLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTV 260
VL VL+ + P P N+TA G K F+ LL G ++ T+
Sbjct: 1708 VLLPPDVLHWESGAIPIPQR---NVTAAAESFGYKIFSRLLTVAGLLPMLQDASHRPFTM 1764
Query: 261 FCPTDAVVNDFMPKYKN--LTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASK 318
PTD+ + P KN E H+ L + ++++ L S + L T +
Sbjct: 1765 LWPTDSALQALPPDRKNWLFHEDHRDKLAAILRGHMIRNIEALASDLPNLGQLRTMHGNT 1824
Query: 319 YDFT--VQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPA 376
F+ + GE++ + +A + T E + Y I+++L P P++
Sbjct: 1825 ISFSCGLTRPGELIVGEDEAHIVQRHLTF---EGGLAYGIDQLLEP-----PDLGARCDR 1876
Query: 377 PAPTPHKRKT 386
P P + KT
Sbjct: 1877 FEPQPLQMKT 1886
>sp|Q3E705|EFG1P_YEAST rRNA-processing protein EFG1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=EFG1 PE=1 SV=2
Length = 233
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 176 GAEDND--GKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQG 233
GA+D D KL AT + E Y I+ + + + + P+ P G+ LT + +Q
Sbjct: 108 GADDKDLQQKLRATKI----ELCYVINFPKTEKYIALYPNDTPSTDPKGVELTNLRREQF 163
Query: 234 CKAFADLLIATGAHTTFEENLDG 256
K A+ + A + +FEE L G
Sbjct: 164 LKLVAERMDANTLNVSFEEILKG 186
>sp|A6ZUS8|EFG1P_YEAS7 rRNA-processing protein EFG1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=EFG1 PE=3 SV=1
Length = 233
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 176 GAEDND--GKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQG 233
GA+D D KL AT + E Y I+ + + + + P+ P G+ LT + +Q
Sbjct: 108 GADDKDLQQKLRATKI----ELCYVINFPKTEKYIALYPNDTPSTDPKGVELTNLRREQF 163
Query: 234 CKAFADLLIATGAHTTFEENLDG 256
K A+ + A + +FEE L G
Sbjct: 164 LKLVAERMDANTLNVSFEEILKG 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,247,395
Number of Sequences: 539616
Number of extensions: 6588614
Number of successful extensions: 19728
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 19599
Number of HSP's gapped (non-prelim): 119
length of query: 435
length of database: 191,569,459
effective HSP length: 120
effective length of query: 315
effective length of database: 126,815,539
effective search space: 39946894785
effective search space used: 39946894785
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)