Query 013843
Match_columns 435
No_of_seqs 506 out of 3532
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 18:09:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013843.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013843hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 6.6E-57 2.3E-61 453.2 42.5 361 36-435 20-385 (457)
2 3jxv_A 70 kDa peptidyl-prolyl 100.0 7.9E-46 2.7E-50 358.4 17.1 263 37-302 2-355 (356)
3 1q1c_A FK506-binding protein 4 100.0 2E-41 6.9E-46 314.9 28.9 233 37-308 41-280 (280)
4 2if4_A ATFKBP42; FKBP-like, al 100.0 5.1E-35 1.7E-39 282.4 23.3 244 162-435 48-298 (338)
5 1p5q_A FKBP52, FK506-binding p 100.0 2.6E-33 8.8E-38 270.3 33.5 244 155-434 17-263 (336)
6 2if4_A ATFKBP42; FKBP-like, al 100.0 1.7E-29 6E-34 243.6 18.6 290 32-435 35-333 (338)
7 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 1.9E-27 6.4E-32 238.7 9.9 247 157-434 23-350 (457)
8 1p5q_A FKBP52, FK506-binding p 99.9 4.7E-25 1.6E-29 212.4 15.9 266 42-429 21-293 (336)
9 1yat_A FK506 binding protein; 99.9 1.6E-24 5.3E-29 174.1 13.1 109 42-153 2-112 (113)
10 1r9h_A FKB-6, FK506 binding pr 99.9 9.2E-25 3.2E-29 180.7 11.9 122 43-167 11-135 (135)
11 3kz7_A FK506-binding protein 3 99.9 1.8E-24 6.2E-29 175.5 13.4 108 44-153 2-118 (119)
12 3o5e_A Peptidyl-prolyl CIS-tra 99.9 7.2E-25 2.5E-29 183.3 11.0 116 37-154 25-142 (144)
13 3o5q_A Peptidyl-prolyl CIS-tra 99.9 1.5E-24 5.2E-29 177.9 11.9 115 38-154 10-126 (128)
14 2y78_A Peptidyl-prolyl CIS-tra 99.9 3.7E-24 1.3E-28 176.2 13.9 110 41-153 23-133 (133)
15 2f4e_A ATFKBP42; FKBP-like, al 99.9 4.8E-24 1.7E-28 184.6 14.5 123 32-157 35-162 (180)
16 3jxv_A 70 kDa peptidyl-prolyl 99.9 2.6E-23 8.9E-28 200.7 20.6 154 43-202 124-283 (356)
17 2lkn_A AH receptor-interacting 99.9 9.2E-25 3.1E-29 184.2 8.5 114 42-158 6-161 (165)
18 4dip_A Peptidyl-prolyl CIS-tra 99.9 6.3E-24 2.1E-28 173.7 13.0 114 40-155 6-123 (125)
19 2jwx_A FKBP38NTD, FK506-bindin 99.9 1.9E-23 6.4E-28 175.9 14.7 110 42-157 38-151 (157)
20 2lgo_A FKBP; infectious diseas 99.9 1.1E-23 3.6E-28 172.9 12.5 110 42-153 18-130 (130)
21 1jvw_A Macrophage infectivity 99.9 5.1E-24 1.7E-28 181.5 10.8 113 38-155 29-143 (167)
22 2ppn_A FK506-binding protein 1 99.9 1.1E-23 3.7E-28 167.6 11.5 105 47-153 1-106 (107)
23 2vn1_A 70 kDa peptidylprolyl i 99.9 2.2E-23 7.5E-28 171.4 13.6 116 38-155 7-127 (129)
24 3oe2_A Peptidyl-prolyl CIS-tra 99.9 9.9E-24 3.4E-28 186.3 12.2 110 37-154 108-218 (219)
25 3b7x_A FK506-binding protein 6 99.9 5.9E-24 2E-28 175.6 9.3 110 42-154 22-133 (134)
26 1fd9_A Protein (macrophage inf 99.9 2.5E-23 8.4E-28 184.0 12.7 112 38-154 98-210 (213)
27 1u79_A FKBP-type peptidyl-prol 99.9 8.4E-24 2.9E-28 173.7 8.9 112 39-153 5-128 (129)
28 3uf8_A Ubiquitin-like protein 99.9 4.3E-23 1.5E-27 182.9 13.4 110 41-153 99-209 (209)
29 1q6h_A FKBP-type peptidyl-prol 99.9 4.7E-23 1.6E-27 183.5 13.5 111 38-153 113-223 (224)
30 2awg_A 38 kDa FK-506 binding p 99.9 1.8E-22 6.1E-27 163.2 12.6 108 41-154 7-117 (118)
31 2d9f_A FK506-binding protein 8 99.9 3.3E-22 1.1E-26 165.3 11.3 112 41-158 11-126 (135)
32 2pbc_A FK506-binding protein 2 99.8 8.6E-21 3E-25 149.3 10.7 95 60-156 4-99 (102)
33 3o5e_A Peptidyl-prolyl CIS-tra 99.8 5.7E-20 1.9E-24 153.5 15.5 115 156-301 26-142 (144)
34 2f4e_A ATFKBP42; FKBP-like, al 99.8 1.3E-19 4.4E-24 156.8 14.9 127 162-318 48-179 (180)
35 3o5q_A Peptidyl-prolyl CIS-tra 99.8 1.8E-19 6.2E-24 147.5 14.5 111 161-302 17-127 (128)
36 3kz7_A FK506-binding protein 3 99.8 5.9E-19 2E-23 142.9 15.6 110 162-301 3-119 (119)
37 2lkn_A AH receptor-interacting 99.8 5.4E-20 1.8E-24 155.1 9.6 117 161-305 8-161 (165)
38 4gco_A Protein STI-1; structur 99.8 6.6E-19 2.2E-23 144.3 14.9 105 316-435 11-115 (126)
39 1r9h_A FKB-6, FK506 binding pr 99.8 6.7E-19 2.3E-23 145.4 14.4 117 156-303 5-123 (135)
40 2vn1_A 70 kDa peptidylprolyl i 99.8 2.1E-18 7.3E-23 141.5 16.3 116 156-302 9-127 (129)
41 1yat_A FK506 binding protein; 99.8 2.6E-18 8.8E-23 137.7 15.0 107 163-300 6-112 (113)
42 2hr2_A Hypothetical protein; a 99.8 1.3E-18 4.5E-23 146.2 13.3 121 312-435 5-136 (159)
43 2ppn_A FK506-binding protein 1 99.8 1.8E-18 6.2E-23 137.2 13.4 106 164-300 1-106 (107)
44 4dt4_A FKBP-type 16 kDa peptid 99.8 3.8E-19 1.3E-23 150.7 9.2 125 61-201 24-157 (169)
45 3b7x_A FK506-binding protein 6 99.8 1.3E-18 4.4E-23 143.5 11.1 114 156-301 19-133 (134)
46 3rkv_A Putative peptidylprolyl 99.8 4.7E-18 1.6E-22 145.1 14.2 124 311-434 4-130 (162)
47 1jvw_A Macrophage infectivity 99.8 5.4E-18 1.9E-22 144.2 14.3 121 161-316 35-155 (167)
48 2lgo_A FKBP; infectious diseas 99.8 7.5E-18 2.6E-22 138.0 14.4 104 166-300 27-130 (130)
49 2awg_A 38 kDa FK-506 binding p 99.8 1.1E-17 3.8E-22 135.0 14.9 112 155-301 5-117 (118)
50 2kr7_A FKBP-type peptidyl-prol 99.8 5.1E-18 1.7E-22 142.3 13.3 124 60-201 5-138 (151)
51 2jwx_A FKBP38NTD, FK506-bindin 99.8 9.5E-18 3.2E-22 141.1 14.7 114 156-304 36-151 (157)
52 2y78_A Peptidyl-prolyl CIS-tra 99.8 1.1E-17 3.8E-22 137.4 14.7 108 161-300 26-133 (133)
53 3uf8_A Ubiquitin-like protein 99.8 2.3E-17 8E-22 146.0 16.6 111 158-300 99-209 (209)
54 4dip_A Peptidyl-prolyl CIS-tra 99.7 3.8E-17 1.3E-21 133.3 15.2 113 159-303 8-124 (125)
55 3pr9_A FKBP-type peptidyl-prol 99.7 9.9E-19 3.4E-23 146.8 5.5 128 61-201 1-142 (157)
56 1q1c_A FK506-binding protein 4 99.7 9.3E-18 3.2E-22 155.6 12.1 106 44-157 166-276 (280)
57 2d9f_A FK506-binding protein 8 99.7 1.1E-17 3.6E-22 138.2 11.0 121 155-310 9-131 (135)
58 2fbn_A 70 kDa peptidylprolyl i 99.7 1.8E-16 6.1E-21 140.0 18.4 142 293-434 13-155 (198)
59 2k8i_A SLYD, peptidyl-prolyl C 99.7 2.1E-17 7.3E-22 140.9 11.7 123 61-201 2-133 (171)
60 2kfw_A FKBP-type peptidyl-prol 99.7 1.2E-17 4.1E-22 145.2 10.3 130 61-201 2-133 (196)
61 1ix5_A FKBP; ppiase, isomerase 99.7 2.3E-18 7.8E-23 144.4 4.1 123 61-201 1-143 (151)
62 3oe2_A Peptidyl-prolyl CIS-tra 99.7 9.1E-17 3.1E-21 141.8 14.1 104 161-301 115-218 (219)
63 4gcn_A Protein STI-1; structur 99.7 1.4E-16 4.7E-21 130.6 13.1 105 314-433 4-115 (127)
64 3prb_A FKBP-type peptidyl-prol 99.7 8.8E-18 3E-22 149.3 6.0 122 61-201 1-142 (231)
65 1fd9_A Protein (macrophage inf 99.7 1.6E-16 5.4E-21 140.4 13.2 108 161-302 104-211 (213)
66 2pbc_A FK506-binding protein 2 99.7 1.8E-16 6.3E-21 124.4 12.1 86 214-303 14-99 (102)
67 1u79_A FKBP-type peptidyl-prol 99.7 1.6E-16 5.6E-21 130.1 12.1 111 161-300 10-128 (129)
68 3gyz_A Chaperone protein IPGC; 99.7 5.5E-16 1.9E-20 130.9 14.4 105 315-434 33-137 (151)
69 1q6h_A FKBP-type peptidyl-prol 99.7 5.4E-16 1.9E-20 137.9 14.1 104 162-300 120-223 (224)
70 3cgm_A SLYD, peptidyl-prolyl C 99.7 1.8E-16 6.1E-21 133.4 8.9 118 62-201 3-129 (158)
71 3upv_A Heat shock protein STI1 99.7 1E-15 3.6E-20 124.5 13.3 101 316-431 2-102 (126)
72 1hxv_A Trigger factor; FKBP fo 99.7 2.2E-16 7.4E-21 125.6 8.7 84 60-153 28-112 (113)
73 3sz7_A HSC70 cochaperone (SGT) 99.6 3.2E-15 1.1E-19 127.6 14.1 106 315-435 8-113 (164)
74 2vgx_A Chaperone SYCD; alterna 99.6 7.1E-15 2.4E-19 123.7 13.8 105 316-435 19-123 (148)
75 4ga2_A E3 SUMO-protein ligase 99.6 3.1E-15 1.1E-19 126.1 10.9 105 316-435 29-134 (150)
76 2xcb_A PCRH, regulatory protei 99.6 1.2E-14 4.1E-19 121.1 13.1 105 316-435 16-120 (142)
77 1ihg_A Cyclophilin 40; ppiase 99.6 1.5E-14 5E-19 140.7 15.3 125 310-434 215-340 (370)
78 1hxi_A PEX5, peroxisome target 99.6 1.8E-14 6.1E-19 116.8 12.0 100 320-434 19-118 (121)
79 3q49_B STIP1 homology and U bo 99.5 7E-14 2.4E-18 114.8 12.4 102 317-433 8-109 (137)
80 3urz_A Uncharacterized protein 99.5 1.5E-13 5E-18 122.3 13.3 118 317-434 3-121 (208)
81 1elw_A TPR1-domain of HOP; HOP 99.5 3E-13 1E-17 107.2 13.4 103 317-434 3-105 (118)
82 1a17_A Serine/threonine protei 99.5 4.9E-13 1.7E-17 113.1 15.3 109 311-434 6-114 (166)
83 4ga2_A E3 SUMO-protein ligase 99.5 2.8E-14 9.7E-19 120.2 6.9 96 324-434 3-98 (150)
84 4gyw_A UDP-N-acetylglucosamine 99.5 3.1E-13 1E-17 142.0 14.8 119 316-434 7-144 (723)
85 2dba_A Smooth muscle cell asso 99.5 4.5E-13 1.5E-17 111.1 12.8 106 317-434 27-132 (148)
86 2lni_A Stress-induced-phosphop 99.5 3.6E-13 1.2E-17 109.4 11.8 104 316-434 14-117 (133)
87 2vyi_A SGTA protein; chaperone 99.5 1.3E-12 4.3E-17 105.4 15.0 108 312-434 6-113 (131)
88 2xev_A YBGF; tetratricopeptide 99.5 1E-12 3.5E-17 106.6 14.2 104 319-434 3-109 (129)
89 2c2l_A CHIP, carboxy terminus 99.5 2.6E-13 8.9E-18 126.8 11.6 102 318-434 4-105 (281)
90 1zu2_A Mitochondrial import re 99.5 1.5E-13 5E-18 115.2 8.3 90 330-434 14-124 (158)
91 4i17_A Hypothetical protein; T 99.4 1.4E-12 4.7E-17 117.2 13.8 101 319-434 8-109 (228)
92 3vtx_A MAMA; tetratricopeptide 99.4 9E-13 3.1E-17 114.1 12.2 68 367-434 107-174 (184)
93 4gyw_A UDP-N-acetylglucosamine 99.4 1.1E-12 3.6E-17 138.0 14.4 99 320-433 79-177 (723)
94 2kck_A TPR repeat; tetratricop 99.4 9.2E-13 3.1E-17 103.4 10.7 101 320-435 8-111 (112)
95 3k9i_A BH0479 protein; putativ 99.4 2.1E-13 7E-18 109.5 6.5 90 330-434 2-94 (117)
96 2pl2_A Hypothetical conserved 99.4 1.6E-12 5.4E-17 116.4 13.0 102 318-434 5-117 (217)
97 4dt4_A FKBP-type 16 kDa peptid 99.4 6.5E-13 2.2E-17 112.4 9.3 64 214-278 33-96 (169)
98 1elr_A TPR2A-domain of HOP; HO 99.4 2.5E-12 8.4E-17 103.8 12.4 103 316-433 2-111 (131)
99 3pr9_A FKBP-type peptidyl-prol 99.4 1.5E-12 5.3E-17 109.1 9.4 64 214-279 10-86 (157)
100 2h6f_A Protein farnesyltransfe 99.4 2.3E-12 7.8E-17 125.6 12.1 102 317-433 96-198 (382)
101 2h6f_A Protein farnesyltransfe 99.4 1.4E-12 4.9E-17 127.1 10.5 102 318-434 131-233 (382)
102 1na0_A Designed protein CTPR3; 99.4 1.5E-11 5.1E-16 98.1 14.6 102 318-434 9-110 (125)
103 3urz_A Uncharacterized protein 99.4 5.8E-12 2E-16 111.9 12.9 97 323-434 59-190 (208)
104 3vtx_A MAMA; tetratricopeptide 99.3 1E-11 3.5E-16 107.4 13.5 118 317-434 4-140 (184)
105 2e2e_A Formate-dependent nitri 99.3 1.3E-11 4.6E-16 106.1 14.0 102 318-434 44-148 (177)
106 2pl2_A Hypothetical conserved 99.3 1E-11 3.5E-16 111.1 13.2 116 318-434 39-184 (217)
107 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.1E-11 3.8E-16 109.7 13.3 102 318-434 37-154 (213)
108 1wao_1 Serine/threonine protei 99.3 1.6E-12 5.4E-17 130.7 8.4 105 316-435 4-108 (477)
109 4i17_A Hypothetical protein; T 99.3 1.8E-11 6E-16 109.9 12.9 110 317-434 75-213 (228)
110 2l6j_A TPR repeat-containing p 99.3 1.7E-12 5.8E-17 102.2 5.2 95 317-426 3-103 (111)
111 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.7E-11 5.9E-16 108.5 12.4 101 316-434 4-104 (213)
112 1xnf_A Lipoprotein NLPI; TPR, 99.3 5.1E-11 1.7E-15 109.3 14.7 104 316-434 41-144 (275)
113 3prb_A FKBP-type peptidyl-prol 99.3 1.5E-11 5.2E-16 109.2 10.4 63 214-278 10-85 (231)
114 2yhc_A BAMD, UPF0169 lipoprote 99.3 3.6E-11 1.2E-15 108.0 13.1 106 318-435 4-130 (225)
115 3qky_A Outer membrane assembly 99.3 3.4E-11 1.1E-15 110.5 13.0 107 317-435 14-131 (261)
116 2kr7_A FKBP-type peptidyl-prol 99.3 4.3E-11 1.5E-15 100.1 11.5 63 214-278 15-78 (151)
117 2k8i_A SLYD, peptidyl-prolyl C 99.2 1.1E-10 3.6E-15 99.4 13.8 62 214-277 11-72 (171)
118 3uq3_A Heat shock protein STI1 99.2 6.6E-11 2.3E-15 107.2 13.5 100 317-431 138-237 (258)
119 2gw1_A Mitochondrial precursor 99.2 9.5E-11 3.3E-15 117.5 14.9 105 314-434 2-106 (514)
120 3qky_A Outer membrane assembly 99.2 9.5E-11 3.2E-15 107.5 13.6 105 318-434 52-181 (261)
121 3gyz_A Chaperone protein IPGC; 99.2 4.9E-12 1.7E-16 106.5 4.4 69 367-435 36-104 (151)
122 2fo7_A Synthetic consensus TPR 99.2 1.8E-10 6.3E-15 92.7 13.7 101 319-434 36-136 (136)
123 1w26_A Trigger factor, TF; cha 99.2 3.4E-11 1.2E-15 118.4 10.6 90 60-158 156-245 (432)
124 2fo7_A Synthetic consensus TPR 99.2 1.9E-10 6.6E-15 92.6 13.0 101 319-434 2-102 (136)
125 3fp2_A TPR repeat-containing p 99.2 5.8E-11 2E-15 120.0 11.8 112 307-434 14-125 (537)
126 1hxv_A Trigger factor; FKBP fo 99.2 2.8E-11 9.5E-16 96.0 7.3 74 214-300 38-112 (113)
127 2kfw_A FKBP-type peptidyl-prol 99.2 5.6E-11 1.9E-15 103.2 9.8 63 214-278 11-73 (196)
128 1qqe_A Vesicular transport pro 99.2 1.6E-10 5.4E-15 108.3 13.5 110 316-434 75-191 (292)
129 2vsy_A XCC0866; transferase, g 99.2 8.6E-11 2.9E-15 120.6 12.4 102 318-434 23-124 (568)
130 3as5_A MAMA; tetratricopeptide 99.2 2E-10 6.9E-15 98.2 12.8 101 319-434 77-177 (186)
131 3ieg_A DNAJ homolog subfamily 99.2 3.4E-10 1.2E-14 107.6 15.6 107 317-434 233-339 (359)
132 4gco_A Protein STI-1; structur 99.2 1.3E-10 4.4E-15 94.5 10.5 69 366-434 12-80 (126)
133 1qqe_A Vesicular transport pro 99.2 1.6E-10 5.5E-15 108.2 12.5 109 317-434 116-232 (292)
134 2kat_A Uncharacterized protein 99.2 6.1E-11 2.1E-15 94.4 8.2 83 336-433 3-85 (115)
135 2pzi_A Probable serine/threoni 99.2 2.8E-11 9.5E-16 127.1 7.9 102 317-434 432-533 (681)
136 2kc7_A BFR218_protein; tetratr 99.2 5E-11 1.7E-15 92.0 7.2 92 321-435 3-95 (99)
137 3as5_A MAMA; tetratricopeptide 99.2 4.8E-10 1.6E-14 95.8 14.2 102 318-434 42-143 (186)
138 3uq3_A Heat shock protein STI1 99.2 2.7E-10 9.4E-15 103.1 13.3 102 316-433 3-111 (258)
139 4eqf_A PEX5-related protein; a 99.2 1.3E-10 4.6E-15 111.6 11.8 102 318-434 213-314 (365)
140 4gcn_A Protein STI-1; structur 99.2 8.9E-11 3E-15 95.6 8.4 69 366-434 7-75 (127)
141 4eqf_A PEX5-related protein; a 99.1 1.5E-10 5.3E-15 111.2 11.4 102 318-434 65-166 (365)
142 1ix5_A FKBP; ppiase, isomerase 99.1 3.9E-11 1.3E-15 100.4 5.8 65 214-279 10-87 (151)
143 4abn_A Tetratricopeptide repea 99.1 1.3E-10 4.4E-15 116.7 10.8 101 319-434 171-291 (474)
144 3ieg_A DNAJ homolog subfamily 99.1 3.8E-10 1.3E-14 107.2 13.5 101 317-432 2-102 (359)
145 3u4t_A TPR repeat-containing p 99.1 2.1E-10 7.1E-15 105.2 11.2 103 320-434 39-141 (272)
146 1fch_A Peroxisomal targeting s 99.1 3E-10 1E-14 108.9 12.9 102 318-434 217-318 (368)
147 3u4t_A TPR repeat-containing p 99.1 3.3E-10 1.1E-14 103.8 12.2 101 319-435 4-108 (272)
148 4abn_A Tetratricopeptide repea 99.1 1.7E-10 6E-15 115.7 11.0 101 318-434 102-212 (474)
149 2q7f_A YRRB protein; TPR, prot 99.1 4.1E-10 1.4E-14 101.2 12.4 99 321-434 128-226 (243)
150 2pzi_A Probable serine/threoni 99.1 1E-10 3.5E-15 122.7 9.6 100 319-434 468-567 (681)
151 2q7f_A YRRB protein; TPR, prot 99.1 8.9E-10 3E-14 98.9 14.4 100 318-432 57-156 (243)
152 3qou_A Protein YBBN; thioredox 99.1 4.8E-10 1.6E-14 104.7 12.7 102 318-434 117-252 (287)
153 3hym_B Cell division cycle pro 99.1 5.4E-10 1.9E-14 105.0 13.1 111 318-434 193-303 (330)
154 2vgx_A Chaperone SYCD; alterna 99.1 7.2E-11 2.4E-15 98.9 6.2 82 339-435 8-89 (148)
155 2y4t_A DNAJ homolog subfamily 99.1 8E-10 2.7E-14 109.1 14.8 106 318-434 257-362 (450)
156 1fch_A Peroxisomal targeting s 99.1 6E-10 2E-14 106.8 13.4 102 318-434 64-165 (368)
157 3cgm_A SLYD, peptidyl-prolyl C 99.1 4.3E-10 1.5E-14 94.4 10.6 58 214-278 11-68 (158)
158 2y4t_A DNAJ homolog subfamily 99.1 6.1E-10 2.1E-14 109.9 13.6 105 315-434 23-127 (450)
159 3u3w_A Transcriptional activat 99.1 8.8E-10 3E-14 103.0 13.7 108 316-431 153-267 (293)
160 1na3_A Designed protein CTPR2; 99.1 1.1E-09 3.7E-14 82.5 11.7 84 317-415 8-91 (91)
161 2r5s_A Uncharacterized protein 99.1 6.5E-10 2.2E-14 95.6 11.7 100 320-434 8-141 (176)
162 2vq2_A PILW, putative fimbrial 99.1 1.6E-09 5.5E-14 95.8 14.2 67 368-434 77-146 (225)
163 2yhc_A BAMD, UPF0169 lipoprote 99.1 1E-09 3.5E-14 98.5 13.0 105 318-434 41-180 (225)
164 3mkr_A Coatomer subunit epsilo 99.1 7.2E-10 2.5E-14 103.8 12.4 68 368-435 201-269 (291)
165 1t11_A Trigger factor, TF; hel 99.1 9.2E-11 3.2E-15 113.8 5.8 97 60-165 159-255 (392)
166 2vq2_A PILW, putative fimbrial 99.1 1.6E-09 5.6E-14 95.7 13.4 103 319-434 77-181 (225)
167 1w3b_A UDP-N-acetylglucosamine 99.1 7.6E-10 2.6E-14 107.3 12.1 117 318-434 67-202 (388)
168 3ma5_A Tetratricopeptide repea 99.1 3E-10 1E-14 88.2 7.3 67 367-433 7-73 (100)
169 2ho1_A Type 4 fimbrial biogene 99.1 1.4E-09 4.8E-14 98.5 13.0 67 368-434 142-208 (252)
170 2vsy_A XCC0866; transferase, g 99.1 1.4E-09 4.9E-14 111.5 14.4 102 318-434 57-161 (568)
171 3ro3_A PINS homolog, G-protein 99.1 1.8E-09 6E-14 89.9 12.4 107 315-430 6-118 (164)
172 3mkr_A Coatomer subunit epsilo 99.0 1.6E-09 5.3E-14 101.5 13.2 100 318-434 130-233 (291)
173 1w3b_A UDP-N-acetylglucosamine 99.0 1.3E-09 4.4E-14 105.7 13.0 67 368-434 238-304 (388)
174 2ho1_A Type 4 fimbrial biogene 99.0 2.9E-09 9.8E-14 96.4 14.5 102 318-434 141-242 (252)
175 2l6j_A TPR repeat-containing p 99.0 8.9E-10 3E-14 86.3 9.7 68 367-434 4-71 (111)
176 3cv0_A Peroxisome targeting si 99.0 2.3E-09 7.7E-14 100.6 13.9 103 317-434 20-122 (327)
177 1xnf_A Lipoprotein NLPI; TPR, 99.0 3.6E-09 1.2E-13 96.8 14.7 69 318-401 77-145 (275)
178 2e2e_A Formate-dependent nitri 99.0 1.2E-10 4.2E-15 100.0 4.5 96 324-434 16-114 (177)
179 2ifu_A Gamma-SNAP; membrane fu 99.0 1.3E-09 4.5E-14 102.7 12.0 107 317-434 115-227 (307)
180 3cv0_A Peroxisome targeting si 99.0 2.3E-09 7.8E-14 100.6 13.5 101 318-433 172-272 (327)
181 1a17_A Serine/threonine protei 99.0 3.5E-09 1.2E-13 89.0 13.1 98 318-430 47-146 (166)
182 3q15_A PSP28, response regulat 99.0 3.4E-09 1.2E-13 102.7 14.3 109 316-433 180-293 (378)
183 2ifu_A Gamma-SNAP; membrane fu 99.0 8.9E-10 3E-14 103.9 9.7 108 316-433 74-187 (307)
184 2xcb_A PCRH, regulatory protei 99.0 4.4E-10 1.5E-14 93.1 6.7 69 367-435 18-86 (142)
185 2qfc_A PLCR protein; TPR, HTH, 99.0 2.8E-09 9.6E-14 99.6 13.0 107 317-431 154-267 (293)
186 3hym_B Cell division cycle pro 99.0 3.6E-09 1.2E-13 99.4 13.8 115 320-434 24-158 (330)
187 3ulq_A Response regulator aspa 99.0 3.5E-09 1.2E-13 102.7 14.0 109 314-431 180-294 (383)
188 1na3_A Designed protein CTPR2; 99.0 3E-09 1E-13 80.0 10.5 68 367-434 9-76 (91)
189 3upv_A Heat shock protein STI1 99.0 2.5E-09 8.5E-14 86.2 10.6 68 367-434 4-71 (126)
190 3ro3_A PINS homolog, G-protein 99.0 6.8E-09 2.3E-13 86.3 13.1 108 317-433 48-161 (164)
191 4g1t_A Interferon-induced prot 99.0 6E-09 2.1E-13 103.6 14.7 111 318-434 51-171 (472)
192 2kc7_A BFR218_protein; tetratr 99.0 2.7E-09 9.2E-14 82.0 9.2 66 370-435 3-69 (99)
193 1hxi_A PEX5, peroxisome target 98.9 4.4E-09 1.5E-13 84.6 9.8 65 370-434 20-84 (121)
194 3edt_B KLC 2, kinesin light ch 98.9 7.8E-09 2.7E-13 94.5 12.4 108 316-430 41-156 (283)
195 2xpi_A Anaphase-promoting comp 98.9 1.1E-08 3.8E-13 104.8 14.8 107 320-434 477-583 (597)
196 3ulq_A Response regulator aspa 98.9 1.2E-08 4.2E-13 98.8 14.3 109 314-430 139-253 (383)
197 2hr2_A Hypothetical protein; a 98.9 3.6E-09 1.2E-13 88.7 8.9 68 367-434 11-97 (159)
198 3fp2_A TPR repeat-containing p 98.9 7.3E-09 2.5E-13 104.5 12.8 102 318-434 310-411 (537)
199 1wao_1 Serine/threonine protei 98.9 1.1E-09 3.8E-14 109.9 6.6 102 318-434 40-154 (477)
200 3sz7_A HSC70 cochaperone (SGT) 98.9 7.1E-09 2.4E-13 87.8 10.5 69 366-434 10-78 (164)
201 2gw1_A Mitochondrial precursor 98.9 7.9E-09 2.7E-13 103.4 12.6 107 319-434 373-482 (514)
202 3u3w_A Transcriptional activat 98.9 4.9E-09 1.7E-13 97.9 10.3 107 318-433 115-228 (293)
203 3gw4_A Uncharacterized protein 98.9 1.8E-08 6E-13 87.8 12.9 106 317-431 25-137 (203)
204 2qfc_A PLCR protein; TPR, HTH, 98.9 3.4E-08 1.2E-12 92.1 15.3 107 317-432 114-227 (293)
205 3edt_B KLC 2, kinesin light ch 98.9 9.1E-09 3.1E-13 94.0 11.0 110 315-431 82-199 (283)
206 3n71_A Histone lysine methyltr 98.9 1.8E-08 6.3E-13 100.8 14.0 112 312-430 303-422 (490)
207 2fbn_A 70 kDa peptidylprolyl i 98.9 9.9E-09 3.4E-13 89.8 10.6 97 317-428 87-184 (198)
208 3nf1_A KLC 1, kinesin light ch 98.9 8.4E-09 2.9E-13 95.9 10.2 111 316-433 151-310 (311)
209 4a1s_A PINS, partner of inscut 98.8 1.6E-08 5.4E-13 98.5 12.2 106 315-431 45-156 (411)
210 3ro2_A PINS homolog, G-protein 98.8 1.6E-08 5.5E-13 94.6 10.7 105 317-432 4-114 (338)
211 2vyi_A SGTA protein; chaperone 98.8 2.4E-08 8.4E-13 79.7 10.3 85 318-417 46-130 (131)
212 3q49_B STIP1 homology and U bo 98.8 2.5E-08 8.5E-13 81.1 10.3 68 367-434 9-76 (137)
213 3qww_A SET and MYND domain-con 98.8 4E-08 1.4E-12 96.8 13.4 109 315-430 295-411 (433)
214 3q15_A PSP28, response regulat 98.8 3.4E-08 1.2E-12 95.6 12.8 108 315-430 138-251 (378)
215 3sf4_A G-protein-signaling mod 98.8 2E-08 6.8E-13 97.1 10.7 104 318-432 9-118 (406)
216 2lni_A Stress-induced-phosphop 98.8 2.5E-08 8.6E-13 80.2 9.5 84 318-416 50-133 (133)
217 3rkv_A Putative peptidylprolyl 98.8 1.7E-08 5.7E-13 85.3 8.7 91 315-420 60-151 (162)
218 2xpi_A Anaphase-promoting comp 98.8 4.8E-08 1.6E-12 100.0 13.8 101 318-433 373-473 (597)
219 1ihg_A Cyclophilin 40; ppiase 98.8 3.3E-08 1.1E-12 95.8 11.6 92 317-423 272-363 (370)
220 2kck_A TPR repeat; tetratricop 98.8 3E-08 1E-12 77.0 9.2 66 368-433 7-72 (112)
221 3nf1_A KLC 1, kinesin light ch 98.8 2.4E-08 8.1E-13 92.8 9.9 110 316-432 109-226 (311)
222 2r5s_A Uncharacterized protein 98.8 2.7E-08 9.2E-13 85.3 9.4 114 315-429 37-172 (176)
223 3sf4_A G-protein-signaling mod 98.8 3.7E-08 1.3E-12 95.2 11.4 107 317-432 186-298 (406)
224 3k9i_A BH0479 protein; putativ 98.7 4E-08 1.4E-12 78.2 9.5 78 315-407 24-101 (117)
225 3gw4_A Uncharacterized protein 98.7 1.2E-07 4E-12 82.5 13.4 109 315-431 63-177 (203)
226 1ouv_A Conserved hypothetical 98.7 1.3E-07 4.3E-12 86.9 13.8 62 368-431 75-144 (273)
227 2ond_A Cleavage stimulation fa 98.7 6E-08 2E-12 91.2 11.5 101 319-434 51-167 (308)
228 2ond_A Cleavage stimulation fa 98.7 9.7E-08 3.3E-12 89.7 12.9 112 319-430 100-232 (308)
229 4a1s_A PINS, partner of inscut 98.7 8E-08 2.7E-12 93.4 12.5 105 318-431 223-333 (411)
230 4g1t_A Interferon-induced prot 98.7 4.3E-08 1.5E-12 97.3 10.7 117 318-434 247-405 (472)
231 2v5f_A Prolyl 4-hydroxylase su 98.7 1.1E-07 3.9E-12 74.1 10.9 83 318-408 5-87 (104)
232 4f3v_A ESX-1 secretion system 98.7 5.8E-08 2E-12 89.4 10.4 101 320-433 137-240 (282)
233 3ro2_A PINS homolog, G-protein 98.7 6.7E-08 2.3E-12 90.3 11.1 106 317-431 182-293 (338)
234 1pc2_A Mitochondria fission pr 98.7 5E-08 1.7E-12 80.7 8.9 87 334-435 14-105 (152)
235 1elw_A TPR1-domain of HOP; HOP 98.7 9.9E-08 3.4E-12 74.7 10.4 68 367-434 4-71 (118)
236 3ma5_A Tetratricopeptide repea 98.7 1.2E-07 4.2E-12 73.1 10.2 84 317-415 6-91 (100)
237 3qwp_A SET and MYND domain-con 98.7 1.7E-07 5.9E-12 92.4 13.6 109 315-430 284-400 (429)
238 1ouv_A Conserved hypothetical 98.7 3.4E-07 1.2E-11 84.0 14.4 62 368-431 111-180 (273)
239 1zu2_A Mitochondrial import re 98.7 4.6E-08 1.6E-12 81.7 7.6 72 317-403 35-127 (158)
240 2xev_A YBGF; tetratricopeptide 98.7 8.6E-08 2.9E-12 77.0 9.1 66 369-434 4-72 (129)
241 1na0_A Designed protein CTPR3; 98.6 2.4E-07 8.2E-12 73.1 11.4 83 318-415 43-125 (125)
242 3dra_A Protein farnesyltransfe 98.6 4E-07 1.4E-11 85.4 13.4 102 318-434 67-179 (306)
243 1dce_A Protein (RAB geranylger 98.6 1.6E-07 5.4E-12 96.1 11.3 102 318-434 63-177 (567)
244 3qou_A Protein YBBN; thioredox 98.6 1.2E-07 4.1E-12 88.3 9.6 114 317-430 150-284 (287)
245 1dce_A Protein (RAB geranylger 98.6 3.2E-07 1.1E-11 93.8 13.4 108 312-434 22-142 (567)
246 3bee_A Putative YFRE protein; 98.6 2.7E-07 9.3E-12 70.3 9.1 68 367-434 6-76 (93)
247 3rjv_A Putative SEL1 repeat pr 98.6 2.3E-07 8E-12 82.2 9.9 114 317-430 17-158 (212)
248 3rjv_A Putative SEL1 repeat pr 98.6 2.7E-07 9.1E-12 81.8 10.0 65 367-432 125-199 (212)
249 1hz4_A MALT regulatory protein 98.6 5.3E-07 1.8E-11 86.7 12.9 109 316-433 51-167 (373)
250 1elr_A TPR2A-domain of HOP; HO 98.6 1.9E-07 6.5E-12 74.5 8.2 68 367-434 4-71 (131)
251 3dra_A Protein farnesyltransfe 98.5 5.1E-07 1.7E-11 84.7 12.3 100 320-434 105-219 (306)
252 2dba_A Smooth muscle cell asso 98.5 5.4E-07 1.9E-11 73.7 10.7 82 317-413 64-145 (148)
253 2kat_A Uncharacterized protein 98.5 4.9E-07 1.7E-11 71.3 9.8 85 318-417 19-105 (115)
254 3dss_A Geranylgeranyl transfer 98.5 1E-06 3.4E-11 83.3 13.4 101 319-434 109-226 (331)
255 2c2l_A CHIP, carboxy terminus 98.5 2.9E-07 1E-11 85.4 9.3 68 367-434 4-71 (281)
256 3dss_A Geranylgeranyl transfer 98.5 8.8E-07 3E-11 83.7 12.3 113 322-434 33-178 (331)
257 1w26_A Trigger factor, TF; cha 98.5 2E-07 6.8E-12 91.6 7.9 77 214-302 166-242 (432)
258 2v5f_A Prolyl 4-hydroxylase su 98.5 5.8E-07 2E-11 70.0 8.6 67 368-434 6-79 (104)
259 3n71_A Histone lysine methyltr 98.4 8.3E-07 2.9E-11 88.8 11.1 108 316-430 349-464 (490)
260 1klx_A Cysteine rich protein B 98.4 2.5E-06 8.6E-11 70.0 11.8 89 324-431 31-127 (138)
261 1hz4_A MALT regulatory protein 98.4 4.2E-06 1.4E-10 80.3 14.7 108 318-432 93-205 (373)
262 3q7a_A Farnesyltransferase alp 98.4 1.3E-06 4.6E-11 82.9 10.8 97 323-434 93-200 (349)
263 3q7a_A Farnesyltransferase alp 98.4 2.2E-06 7.6E-11 81.4 11.9 92 328-434 64-158 (349)
264 2ooe_A Cleavage stimulation fa 98.2 5.2E-06 1.8E-10 84.0 12.0 117 318-434 321-458 (530)
265 2ooe_A Cleavage stimulation fa 98.2 4.7E-06 1.6E-10 84.3 11.2 101 318-433 272-388 (530)
266 2xm6_A Protein corresponding t 98.1 1.9E-05 6.4E-10 79.1 13.5 65 367-433 363-435 (490)
267 1t11_A Trigger factor, TF; hel 98.1 8.8E-07 3E-11 85.8 3.5 78 214-303 169-246 (392)
268 1pc2_A Mitochondria fission pr 98.1 1.2E-05 4E-10 66.5 9.3 80 318-411 32-115 (152)
269 4f3v_A ESX-1 secretion system 98.1 1.8E-06 6.1E-11 79.5 4.8 97 319-431 103-201 (282)
270 3ffl_A Anaphase-promoting comp 98.1 6.8E-05 2.3E-09 62.3 13.7 101 320-426 22-147 (167)
271 3ly7_A Transcriptional activat 98.1 5.1E-05 1.7E-09 72.1 14.4 114 320-434 198-343 (372)
272 1nzn_A CGI-135 protein, fissio 98.1 8E-06 2.7E-10 65.0 7.5 88 333-435 16-108 (126)
273 3u64_A Protein TP_0956; tetrat 98.0 2.5E-05 8.7E-10 71.3 10.3 88 333-433 178-272 (301)
274 2xm6_A Protein corresponding t 98.0 6.9E-05 2.4E-09 74.9 14.2 93 318-429 39-143 (490)
275 4b4t_Q 26S proteasome regulato 98.0 2.7E-05 9.2E-10 76.0 10.1 121 312-432 49-206 (434)
276 3e4b_A ALGK; tetratricopeptide 97.9 3.1E-05 1.1E-09 76.8 10.3 93 320-430 178-280 (452)
277 3gty_X Trigger factor, TF; cha 97.9 2.4E-05 8.2E-10 76.7 9.0 79 61-160 154-232 (433)
278 4b4t_Q 26S proteasome regulato 97.9 5.6E-05 1.9E-09 73.7 11.8 104 318-430 135-245 (434)
279 1xi4_A Clathrin heavy chain; a 97.9 3.3E-05 1.1E-09 84.4 10.7 92 320-434 1197-1313(1630)
280 1b89_A Protein (clathrin heavy 97.9 2.2E-05 7.4E-10 76.6 7.8 31 404-434 210-240 (449)
281 3bee_A Putative YFRE protein; 97.9 5.5E-05 1.9E-09 57.3 8.0 69 318-401 6-77 (93)
282 1klx_A Cysteine rich protein B 97.8 6E-05 2E-09 61.6 8.6 78 332-430 9-90 (138)
283 3e4b_A ALGK; tetratricopeptide 97.8 1.8E-05 6E-10 78.6 4.9 91 322-432 7-105 (452)
284 3qwp_A SET and MYND domain-con 97.7 9.4E-05 3.2E-09 72.7 9.5 94 315-415 326-427 (429)
285 3o48_A Mitochondria fission 1 97.7 0.00011 3.8E-09 58.6 7.9 69 367-435 40-112 (134)
286 3mv2_B Coatomer subunit epsilo 97.7 7.8E-05 2.7E-09 69.4 7.9 93 325-435 183-287 (310)
287 1y8m_A FIS1; mitochondria, unk 97.7 0.00019 6.6E-09 57.9 8.8 69 367-435 39-111 (144)
288 1xi4_A Clathrin heavy chain; a 97.6 0.00018 6.2E-09 78.8 10.9 107 322-433 1053-1166(1630)
289 2ff4_A Probable regulatory pro 97.6 0.0014 4.9E-08 63.4 16.0 114 316-429 113-233 (388)
290 3qww_A SET and MYND domain-con 97.5 0.00027 9.2E-09 69.4 9.6 80 316-402 338-422 (433)
291 3mv2_B Coatomer subunit epsilo 97.3 0.0018 6E-08 60.3 11.0 110 320-432 102-242 (310)
292 1nzn_A CGI-135 protein, fissio 97.3 0.0017 6E-08 51.5 9.4 78 320-410 37-117 (126)
293 3o48_A Mitochondria fission 1 97.3 0.0038 1.3E-07 49.7 11.2 79 320-412 42-123 (134)
294 1y8m_A FIS1; mitochondria, unk 97.2 0.0058 2E-07 49.3 12.1 78 319-410 40-120 (144)
295 3ffl_A Anaphase-promoting comp 97.0 0.0038 1.3E-07 51.8 9.4 95 316-411 61-165 (167)
296 1b89_A Protein (clathrin heavy 96.7 0.0026 8.8E-08 62.0 6.9 112 311-431 141-273 (449)
297 3u64_A Protein TP_0956; tetrat 96.6 0.0032 1.1E-07 57.5 6.3 53 382-434 178-237 (301)
298 3ly7_A Transcriptional activat 96.4 0.014 4.9E-07 55.3 10.1 65 322-402 281-345 (372)
299 4h7y_A Dual specificity protei 96.3 0.03 1E-06 45.6 9.9 91 335-433 36-126 (161)
300 4gns_B Protein CSD3, chitin bi 96.0 0.051 1.7E-06 56.6 12.5 60 368-427 338-397 (754)
301 3txn_A 26S proteasome regulato 95.9 0.11 3.8E-06 49.9 13.5 98 323-429 104-209 (394)
302 4e6h_A MRNA 3'-END-processing 95.8 0.058 2E-06 55.9 12.0 98 321-432 437-535 (679)
303 4e6h_A MRNA 3'-END-processing 95.6 0.12 4E-06 53.6 13.4 113 321-434 381-503 (679)
304 3kae_A CDC27, possible protein 95.4 0.1 3.6E-06 43.2 9.5 89 324-432 39-145 (242)
305 4b4t_R RPN7, 26S proteasome re 95.2 0.062 2.1E-06 52.5 9.1 99 320-430 133-237 (429)
306 3mkr_B Coatomer subunit alpha; 95.0 0.23 7.8E-06 45.8 11.6 117 317-433 101-230 (320)
307 3gty_X Trigger factor, TF; cha 94.9 0.059 2E-06 52.6 7.9 59 222-303 170-228 (433)
308 3mv2_A Coatomer subunit alpha; 94.9 0.15 5.3E-06 46.9 10.1 119 315-433 111-239 (325)
309 4b4t_P 26S proteasome regulato 94.4 0.84 2.9E-05 44.6 15.0 106 316-430 135-247 (445)
310 2uy1_A Cleavage stimulation fa 93.5 0.65 2.2E-05 46.1 12.4 113 320-434 215-353 (493)
311 1zbp_A Hypothetical protein VP 93.4 0.77 2.6E-05 41.2 11.2 95 325-434 4-133 (273)
312 4gns_B Protein CSD3, chitin bi 93.2 0.2 6.7E-06 52.2 8.2 59 320-393 339-397 (754)
313 1ya0_A SMG-7 transcript varian 93.1 0.38 1.3E-05 47.7 9.7 66 365-430 150-215 (497)
314 4g26_A Pentatricopeptide repea 92.7 2 6.8E-05 42.6 14.5 96 320-429 107-203 (501)
315 1zbp_A Hypothetical protein VP 92.6 0.32 1.1E-05 43.6 7.6 58 376-433 6-63 (273)
316 2v6y_A AAA family ATPase, P60 92.3 0.38 1.3E-05 34.9 6.4 40 309-348 1-41 (83)
317 2uy1_A Cleavage stimulation fa 91.7 1.6 5.4E-05 43.2 12.4 51 383-434 195-245 (493)
318 2cpt_A SKD1 protein, vacuolar 91.5 0.76 2.6E-05 35.7 7.7 43 307-349 6-49 (117)
319 1ya0_A SMG-7 transcript varian 90.6 1.7 5.8E-05 43.0 11.1 81 318-413 152-232 (497)
320 2w2u_A Hypothetical P60 katani 89.1 0.79 2.7E-05 33.2 5.5 37 312-348 13-49 (83)
321 3txn_A 26S proteasome regulato 88.5 4.4 0.00015 38.7 11.9 115 316-430 17-168 (394)
322 2v6x_A Vacuolar protein sortin 87.2 1 3.5E-05 32.7 5.2 40 309-348 4-43 (85)
323 3mkq_B Coatomer subunit alpha; 87.1 2.6 8.8E-05 35.3 8.2 28 318-345 34-61 (177)
324 1wfd_A Hypothetical protein 15 86.7 2.8 9.6E-05 31.0 7.4 37 313-349 10-46 (93)
325 4g26_A Pentatricopeptide repea 85.5 5 0.00017 39.7 10.9 85 332-430 84-169 (501)
326 2dl1_A Spartin; SPG20, MIT, st 84.9 7.5 0.00026 29.8 9.0 74 313-386 17-97 (116)
327 4a5x_A MITD1, MIT domain-conta 84.9 3.7 0.00013 29.8 7.1 35 315-349 13-47 (86)
328 4fhn_B Nucleoporin NUP120; pro 83.6 1.9 6.5E-05 47.5 7.5 105 322-426 846-963 (1139)
329 2crb_A Nuclear receptor bindin 83.1 5.5 0.00019 29.1 7.1 39 313-351 10-48 (97)
330 1wy6_A Hypothetical protein ST 82.9 6.8 0.00023 31.3 8.2 60 370-429 93-153 (172)
331 3mkq_A Coatomer beta'-subunit; 82.7 4.1 0.00014 42.4 9.5 23 370-392 684-706 (814)
332 3mkq_A Coatomer beta'-subunit; 81.9 11 0.00039 38.9 12.5 50 373-427 700-762 (814)
333 4b4t_S RPN3, 26S proteasome re 81.8 2.5 8.6E-05 41.7 6.7 68 367-434 231-303 (523)
334 2ff4_A Probable regulatory pro 81.1 6 0.00021 37.6 9.2 63 318-395 171-233 (388)
335 3mkq_B Coatomer subunit alpha; 79.2 4.4 0.00015 33.9 6.5 46 377-427 15-60 (177)
336 3spa_A Mtrpol, DNA-directed RN 78.3 30 0.001 37.3 13.8 100 319-429 128-229 (1134)
337 4h7y_A Dual specificity protei 78.2 7.5 0.00026 31.6 7.2 72 329-416 71-142 (161)
338 3lpz_A GET4 (YOR164C homolog); 76.3 49 0.0017 30.6 14.6 110 313-425 30-160 (336)
339 3t5v_B Nuclear mRNA export pro 75.7 5.1 0.00017 39.0 6.8 101 333-433 141-253 (455)
340 2vkj_A TM1634; membrane protei 75.0 21 0.00072 25.8 8.1 34 315-348 50-83 (106)
341 3ax2_A Mitochondrial import re 74.0 8.3 0.00028 26.9 5.7 39 312-350 11-49 (73)
342 2crb_A Nuclear receptor bindin 72.7 5.8 0.0002 28.9 4.7 28 367-394 15-42 (97)
343 1om2_A Protein (mitochondrial 71.4 11 0.00036 27.9 6.0 40 311-350 13-52 (95)
344 4b4t_R RPN7, 26S proteasome re 70.5 5.5 0.00019 38.5 5.7 62 369-430 133-197 (429)
345 2yin_A DOCK2, dedicator of cyt 70.0 17 0.0006 35.0 9.1 98 320-417 37-142 (436)
346 1qsa_A Protein (soluble lytic 68.7 12 0.00039 38.1 7.8 53 377-429 295-347 (618)
347 4b4t_P 26S proteasome regulato 67.8 28 0.00096 33.6 10.2 73 316-396 175-247 (445)
348 3kae_A CDC27, possible protein 66.8 54 0.0019 27.2 13.6 108 318-433 62-240 (242)
349 2wpv_A GET4, UPF0363 protein Y 66.7 77 0.0026 28.9 13.4 108 315-425 30-158 (312)
350 2ijq_A Hypothetical protein; s 66.1 53 0.0018 26.8 10.0 72 318-396 32-104 (161)
351 2rkl_A Vacuolar protein sortin 65.6 13 0.00044 24.1 4.7 40 310-349 12-51 (53)
352 4b4t_S RPN3, 26S proteasome re 59.9 20 0.00067 35.4 7.2 73 318-400 231-303 (523)
353 4gq2_M Nucleoporin NUP120; bet 58.7 43 0.0015 35.9 10.4 93 322-414 844-949 (950)
354 3t5x_A PCI domain-containing p 55.4 35 0.0012 29.0 7.4 37 366-402 13-49 (203)
355 2cfu_A SDSA1; SDS-hydrolase, l 55.2 21 0.00072 36.6 6.9 52 368-419 450-501 (658)
356 3eab_A Spastin; spastin, MIT, 54.7 58 0.002 23.6 7.6 68 313-380 11-85 (89)
357 2vkj_A TM1634; membrane protei 53.8 60 0.002 23.4 7.3 53 360-413 46-102 (106)
358 3ax2_A Mitochondrial import re 53.0 18 0.00062 25.2 4.1 26 372-397 22-47 (73)
359 2rpa_A Katanin P60 ATPase-cont 52.6 15 0.00051 26.0 3.7 32 318-349 12-43 (78)
360 2cpt_A SKD1 protein, vacuolar 51.7 70 0.0024 24.4 7.8 20 383-402 41-60 (117)
361 4a5x_A MITD1, MIT domain-conta 50.1 67 0.0023 23.0 8.4 26 370-395 19-44 (86)
362 1wfd_A Hypothetical protein 15 49.6 45 0.0015 24.3 6.2 19 383-401 38-56 (93)
363 2v6y_A AAA family ATPase, P60 48.9 37 0.0013 24.2 5.4 18 383-400 34-51 (83)
364 3qnk_A Putative lipoprotein; a 48.2 1.6E+02 0.0056 28.7 12.0 47 383-429 153-210 (517)
365 2ijq_A Hypothetical protein; s 47.2 95 0.0032 25.2 8.3 60 371-430 36-104 (161)
366 4gq2_M Nucleoporin NUP120; bet 47.2 24 0.00081 37.9 6.0 48 377-428 820-867 (950)
367 2npm_A 14-3-3 domain containin 46.9 69 0.0024 28.3 8.0 53 335-395 173-226 (260)
368 4aez_C MAD3, mitotic spindle c 46.3 1E+02 0.0034 26.6 8.7 46 385-430 132-179 (223)
369 2ymb_A MITD1, MIT domain-conta 46.1 4.3 0.00015 36.1 0.0 40 311-350 16-55 (257)
370 4a1g_A Mitotic checkpoint seri 45.3 1.2E+02 0.004 24.5 8.4 45 386-430 84-130 (152)
371 2o8p_A 14-3-3 domain containin 44.7 52 0.0018 28.5 6.7 72 318-396 120-197 (227)
372 2cwy_A Hypothetical protein TT 43.4 93 0.0032 22.7 7.6 64 322-396 5-68 (94)
373 2rpa_A Katanin P60 ATPase-cont 43.4 19 0.00066 25.4 3.1 27 370-396 15-41 (78)
374 2w2u_A Hypothetical P60 katani 42.3 89 0.0031 22.1 7.3 24 372-395 24-47 (83)
375 2br9_A 14-3-3E, 14-3-3 protein 42.2 64 0.0022 28.1 6.9 54 335-395 147-201 (234)
376 2wb7_A PT26-6P; extra chromoso 42.1 89 0.003 30.4 8.3 87 310-396 421-516 (526)
377 4fhn_B Nucleoporin NUP120; pro 41.4 27 0.00091 38.4 5.4 49 375-427 820-868 (1139)
378 2xze_A STAM-binding protein; h 40.2 63 0.0022 25.8 6.1 46 309-354 31-80 (146)
379 2wvi_A Mitotic checkpoint seri 39.0 1.6E+02 0.0054 24.0 8.7 45 386-430 79-125 (164)
380 3myv_A SUSD superfamily protei 39.0 39 0.0013 32.6 5.7 30 367-396 190-219 (454)
381 3ubw_A 14-3-3E, 14-3-3 protein 38.8 78 0.0027 28.0 6.9 54 335-395 173-227 (261)
382 3myv_A SUSD superfamily protei 38.2 60 0.0021 31.3 6.9 48 383-430 164-219 (454)
383 3htx_A HEN1; HEN1, small RNA m 38.2 62 0.0021 34.1 7.1 62 60-125 559-652 (950)
384 3lew_A SUSD-like carbohydrate 38.0 77 0.0026 30.9 7.7 30 367-396 203-232 (495)
385 1o9d_A 14-3-3-like protein C; 37.9 80 0.0027 27.9 6.9 54 335-395 152-206 (260)
386 3uzd_A 14-3-3 protein gamma; s 37.8 83 0.0028 27.6 6.9 54 335-395 148-202 (248)
387 1om2_A Protein (mitochondrial 37.5 32 0.0011 25.3 3.6 27 371-397 24-50 (95)
388 2v6x_A Vacuolar protein sortin 37.0 1.1E+02 0.0037 21.6 6.5 17 379-395 25-41 (85)
389 3dza_A Uncharacterized putativ 36.6 1.5E+02 0.0051 24.8 7.9 63 319-395 109-178 (191)
390 3kez_A Putative sugar binding 36.1 44 0.0015 32.3 5.6 30 367-396 196-225 (461)
391 3iqu_A 14-3-3 protein sigma; s 36.0 93 0.0032 27.1 6.9 55 334-395 149-204 (236)
392 3i4g_A SUSD-like carbohydrate 35.6 1.9E+02 0.0064 28.4 10.1 48 383-430 167-227 (528)
393 3otn_A SUSD superfamily protei 35.4 2.1E+02 0.0073 27.6 10.5 47 383-429 160-225 (482)
394 3spa_A Mtrpol, DNA-directed RN 35.4 1.5E+02 0.005 32.1 9.5 63 367-429 127-193 (1134)
395 3kez_A Putative sugar binding 35.4 69 0.0024 30.9 6.8 47 383-429 170-224 (461)
396 2oo2_A Hypothetical protein AF 35.1 72 0.0025 22.9 5.0 37 311-347 28-64 (86)
397 2pmr_A Uncharacterized protein 34.1 75 0.0026 22.9 5.0 37 311-347 32-68 (87)
398 3lew_A SUSD-like carbohydrate 34.1 87 0.003 30.6 7.4 48 383-430 174-232 (495)
399 3mcx_A SUSD superfamily protei 32.7 47 0.0016 32.3 5.1 31 367-397 202-232 (477)
400 4b4t_O 26S proteasome regulato 32.2 2.9E+02 0.01 25.8 10.5 100 328-429 86-197 (393)
401 3mcx_A SUSD superfamily protei 32.2 76 0.0026 30.8 6.6 48 383-430 176-231 (477)
402 3hdx_A SUSD homolog, SUSD supe 31.2 1.1E+02 0.0039 29.5 7.7 31 366-396 196-226 (478)
403 3efz_A 14-3-3 protein; 14-3-3, 30.3 70 0.0024 28.4 5.2 58 334-396 168-226 (268)
404 2wm9_A Dedicator of cytokinesi 30.2 81 0.0028 30.2 6.2 102 318-420 11-140 (428)
405 3t5v_B Nuclear mRNA export pro 29.8 2.3E+02 0.008 27.2 9.4 83 313-400 171-254 (455)
406 3snx_A SUSD homolog, putative 29.1 1.1E+02 0.0038 29.5 7.1 30 367-396 191-220 (460)
407 2yhe_A SEC-alkyl sulfatase; hy 32.9 13 0.00046 38.0 0.0 53 368-420 462-514 (668)
408 3t5x_A PCI domain-containing p 26.7 2.8E+02 0.0095 23.2 8.4 37 315-351 11-47 (203)
409 3ckc_A SUSD; TPR repeat, carbo 26.6 4.1E+02 0.014 25.6 11.0 88 336-429 104-231 (527)
410 2zan_A Vacuolar protein sortin 26.4 14 0.00047 35.8 0.0 38 313-350 6-43 (444)
411 3esl_A Checkpoint serine/threo 26.0 3E+02 0.01 23.2 12.3 83 339-431 58-145 (202)
412 3qnk_A Putative lipoprotein; a 25.6 1.5E+02 0.0053 28.9 7.5 30 367-396 182-211 (517)
413 3pmr_A Amyloid-like protein 1; 24.3 3.3E+02 0.011 23.2 8.8 66 366-432 92-159 (219)
414 3r9m_A BRO1 domain-containing 24.2 1.7E+02 0.0057 27.4 7.1 62 335-396 216-282 (376)
415 2p4v_A Transcription elongatio 23.9 1.5E+02 0.0052 23.8 5.9 22 103-126 122-143 (158)
416 2a9u_A Ubiquitin carboxyl-term 23.8 1.9E+02 0.0067 22.9 6.3 39 310-348 34-72 (144)
417 3snx_A SUSD homolog, putative 22.9 1.1E+02 0.0037 29.5 5.7 47 383-429 160-219 (460)
418 3iv0_A SUSD homolog; NP_809186 22.3 5.2E+02 0.018 24.7 10.7 46 383-428 166-239 (481)
419 1wol_A ST0689, 122AA long cons 22.3 1.9E+02 0.0064 21.8 6.0 37 311-347 4-40 (122)
420 2g0u_A Type III secretion syst 22.1 2E+02 0.0067 20.9 5.4 35 381-418 30-64 (92)
421 3i4g_A SUSD-like carbohydrate 22.0 1.9E+02 0.0066 28.3 7.4 30 367-396 198-227 (528)
422 3hdx_A SUSD homolog, SUSD supe 21.7 1.7E+02 0.0058 28.3 6.9 48 383-430 156-226 (478)
423 2cwy_A Hypothetical protein TT 21.6 2.2E+02 0.0074 20.6 5.8 56 372-429 6-67 (94)
424 3jys_A SUSD superfamily protei 21.2 1.7E+02 0.0057 28.5 6.7 33 362-395 190-222 (499)
425 3re2_A Predicted protein; meni 21.2 2.6E+02 0.009 26.1 7.3 30 399-428 294-323 (472)
426 1ufb_A TT1696 protein; structu 20.3 1.9E+02 0.0065 21.8 5.6 36 312-347 5-40 (127)
No 1
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=6.6e-57 Score=453.20 Aligned_cols=361 Identities=35% Similarity=0.598 Sum_probs=305.5
Q ss_pred cCCccee-ecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccC
Q 013843 36 KVGEERG-LGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKK 114 (435)
Q Consensus 36 ~~~~~~~-~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~ 114 (435)
..+.++. .+++||+|+++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++
T Consensus 20 ~~~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~ 99 (457)
T 1kt0_A 20 EQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKR 99 (457)
T ss_dssp -------------CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCT
T ss_pred CCcccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCC
Confidence 3444543 589999999999999955599999999999999989999999998888999999999999999999999999
Q ss_pred CcEEEEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeeeeeccCCCCceEEEEEeccCCCCCCCCCCeEEEEEEEEe
Q 013843 115 RECAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVML 193 (435)
Q Consensus 115 G~~~~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~~~~d~~~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~ 193 (435)
|++++| +|||+++||..+.+ .||++++++|+|+|+.+... ++..|+++.+++++.|.|+..|..++.|+++|
T Consensus 100 Ge~~~~--~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~-~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y---- 172 (457)
T 1kt0_A 100 GEICHL--LCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGE-DLFEDGGIIRRTKRKGEGYSNPNEGATVEIHL---- 172 (457)
T ss_dssp TCEEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-ETTSSSSEEEEEEECCBCSCCCCTTCEEEEEE----
T ss_pred CCEEEE--EEChHHhccccCCCCCCCCCCcEEEEEeeceeecc-cccCCcceEEEEEecCCCCCCCCCCCEEEEEE----
Confidence 999999 99999999999875 89999999999999999754 67789999999999999999999998888755
Q ss_pred CCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEEcCCC---CcchHHHHHHcccccCcEEEEEEcCC
Q 013843 194 GDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEE---QVIAGLDRVAATMKKEEWAIVTINHE 270 (435)
Q Consensus 194 ~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~---~v~~g~~~~l~~m~~Ge~~~i~~~~~ 270 (435)
+|++ +|++||++ +++|.+|++ .++++|+.|+..|++||++.|.++|.
T Consensus 173 -----------------------~g~~-~g~~f~~~------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~ 222 (457)
T 1kt0_A 173 -----------------------EGRC-GGRMFDCR------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPR 222 (457)
T ss_dssp -----------------------EEEE-TTEEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGG
T ss_pred -----------------------EEEe-CCeEEecC------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcc
Confidence 5555 67788876 689999976 58999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCeEEEEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhcc
Q 013843 271 YGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (435)
Q Consensus 271 ~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~ 350 (435)
++|+..+... ..||++..+.|.+.+..+.+....|.+........+..++++|+.+++.|+|++|+..|++|+++.|.
T Consensus 223 ~ay~~~g~~~--~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~ 300 (457)
T 1kt0_A 223 YGFGEAGKPK--FGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM 300 (457)
T ss_dssp GTTCSSCBGG--GTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCCcc--cCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc
Confidence 9999988753 25999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 351 DGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
+..+.+++......+...+|+|+|.||+++++|++|+.+|++||+++|+++++|+++|.+|..+|++++|+.+|++|+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 301 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 87777788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 013843 431 DPQNR 435 (435)
Q Consensus 431 ~P~n~ 435 (435)
+|+|.
T Consensus 381 ~P~~~ 385 (457)
T 1kt0_A 381 NPQNK 385 (457)
T ss_dssp C----
T ss_pred CCCCH
Confidence 99874
No 2
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=7.9e-46 Score=358.37 Aligned_cols=263 Identities=55% Similarity=0.909 Sum_probs=127.1
Q ss_pred CCcceeecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCc
Q 013843 37 VGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (435)
Q Consensus 37 ~~~~~~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~ 116 (435)
.+++.+++++||+|+++++|+|+..|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~~~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge 81 (356)
T 3jxv_A 2 VGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGE 81 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCC
Confidence 45667889999999999999997789999999999999999999999999888999999999999999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeeeeeccCCCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCC
Q 013843 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGD 195 (435)
Q Consensus 117 ~~~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~~~~d~~~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~ 195 (435)
+++| +|||++|||..+.+ .||++++|+|+|+|+++....|+..|+.+.++++++|.|+.+|..++.|++||++++.+
T Consensus 82 ~~~~--~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~d 159 (356)
T 3jxv_A 82 NALF--TIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLED 159 (356)
T ss_dssp --------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETT
T ss_pred EEEE--EEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECC
Confidence 9999 99999999999987 99999999999999999999999999999999999999999999999999999999999
Q ss_pred Cceeeec------------------------------------------------------CCCCeeEEEEE--------
Q 013843 196 GTMVAKT------------------------------------------------------PEEGVEFYLKD-------- 213 (435)
Q Consensus 196 g~~v~~~------------------------------------------------------~~~~~~~~~~~-------- 213 (435)
|+++.++ |...+.|++.-
T Consensus 160 gt~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~d 239 (356)
T 3jxv_A 160 GTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTE 239 (356)
T ss_dssp SCEEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEE
T ss_pred CCEEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccc
Confidence 9876542 01112222210
Q ss_pred ----------------------------EEEEEEecCCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEE
Q 013843 214 ----------------------------VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIV 265 (435)
Q Consensus 214 ----------------------------v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i 265 (435)
+||++++.||++|+++.+..++|+.|.+|.+++|+||+.+|.+|++||++.|
T Consensus 240 v~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v 319 (356)
T 3jxv_A 240 IGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALV 319 (356)
T ss_dssp ESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEE
T ss_pred cccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEE
Confidence 9999999999999988446689999999999999999999999999999999
Q ss_pred EEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEe
Q 013843 266 TINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (435)
Q Consensus 266 ~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~ 302 (435)
.|||+++||..+... ...||++++++|+|+|+++.+
T Consensus 320 ~ip~~~aYG~~~~~~-~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 320 TIPPEYAYGSTESKQ-DAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EECGGGTTTTSCEES-SSEECTTCCEEEEEEEEEEEC
T ss_pred EEChHHccCCCCcCC-CCcCCcCCeEEEEEEEEEEEc
Confidence 999999999887532 136999999999999999874
No 3
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=2e-41 Score=314.85 Aligned_cols=233 Identities=37% Similarity=0.614 Sum_probs=205.8
Q ss_pred CCccee-ecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCC
Q 013843 37 VGEERG-LGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKR 115 (435)
Q Consensus 37 ~~~~~~-~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G 115 (435)
.+.++. .+++||+|+++++|+|...|+.||.|+|||++++.||++|++|++++.|+.|.+|.+++++||+++|.+|++|
T Consensus 41 ~~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~G 120 (280)
T 1q1c_A 41 EGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVG 120 (280)
T ss_dssp CCEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTT
T ss_pred cccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCC
Confidence 444443 4799999999999999555999999999999999999999999987789999999999999999999999999
Q ss_pred cEEEEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeeeeeccC--CCCceEEEEEeccCCCCCCCCCCeEEEEEEEE
Q 013843 116 ECAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVM 192 (435)
Q Consensus 116 ~~~~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~~~~d~~--~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~ 192 (435)
++++| .|||++|||..+.+ .||++++++|+|+|+.+.. .++. .|+++.++++++|.|+..|..++.|+++|
T Consensus 121 e~~~v--~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y--- 194 (280)
T 1q1c_A 121 EVCHI--TCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVAL--- 194 (280)
T ss_dssp CEEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEE---
T ss_pred CEEEE--EECcHHhCCCcCccCCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccccccCCceEEEEE---
Confidence 99999 99999999998866 8999999999999999875 3565 88999999999999988899999988766
Q ss_pred eCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEEcCCCC---cchHHHHHHcccccCcEEEEEEcC
Q 013843 193 LGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEEQ---VIAGLDRVAATMKKEEWAIVTINH 269 (435)
Q Consensus 193 ~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~---v~~g~~~~l~~m~~Ge~~~i~~~~ 269 (435)
++++ ||++||++ |+.|.+|.++ +++||+.+|.+|++||++.|.+||
T Consensus 195 ------------------------~g~~-dG~~fd~~------~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~ 243 (280)
T 1q1c_A 195 ------------------------EGYY-KDKLFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKP 243 (280)
T ss_dssp ------------------------EEEE-TTEEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECG
T ss_pred ------------------------EEEe-CCEEEecC------CeEEEecCCcccccchhHHHHHhCCCCCcEEEEEECh
Confidence 4444 67778764 8999999987 599999999999999999999999
Q ss_pred CCCCCccccccccccCCCCCeEEEEEEEEEEEecCCCCC
Q 013843 270 EYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWE 308 (435)
Q Consensus 270 ~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~~~~~~ 308 (435)
+|+||..+... ..||++++++|+|+|+++.+.++.|+
T Consensus 244 ~~~yG~~~~~~--~~IP~~~~l~f~V~L~~i~~~~~~W~ 280 (280)
T 1q1c_A 244 SYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWE 280 (280)
T ss_dssp GGTTTTTCBGG--GTBCTTCCEEEEEEEEEEECCCC---
T ss_pred hHcCCcCCCcc--CccCCCCeEEEEEEEEEEeCCCCCCC
Confidence 99999988653 14999999999999999999998885
No 4
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=5.1e-35 Score=282.37 Aligned_cols=244 Identities=32% Similarity=0.522 Sum_probs=207.2
Q ss_pred CCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEec-CCcEEeecCCCCCCCeEEE
Q 013843 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYDGEQPLEFI 240 (435)
Q Consensus 162 dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~-~g~~f~~~~~~~~~p~~~~ 240 (435)
+.++.++++++|.|. .|..++.|+|||. |++. +|++||++ +.+++|++|.
T Consensus 48 ~~~~~~~~~~~g~g~-~~~~gd~v~v~y~---------------------------g~~~~~g~~fd~~-~~~~~~~~~~ 98 (338)
T 2if4_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHYR---------------------------AWTKNSQHKFEDT-WHEQQPIELV 98 (338)
T ss_dssp ETTEEEEEEECCBSC-CCCTTCEEEEEEE---------------------------EEETTTCCCCEEH-HHHTCCEEEE
T ss_pred CCCeEEEEEeCCCCC-CCCCCCEEEEEEE---------------------------EEEcCCCcEeecc-cCCCCCeEEE
Confidence 357889999999997 7888888887664 4444 37888887 6778899999
Q ss_pred cCCC-CcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEecC---CCCCCChHHHHH
Q 013843 241 TDEE-QVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEK---VPWEMNNQGKIE 316 (435)
Q Consensus 241 lg~~-~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~~---~~~~~~~~~~~~ 316 (435)
+|.+ ++|+||+.+|.+|++||++.|.||+.++||..+... +..||+++.+.|.++|..+.... ..|.++..++++
T Consensus 99 lg~~~~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~-~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~ 177 (338)
T 2if4_A 99 LGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIG 177 (338)
T ss_dssp TTSCCGGGHHHHHHHHHCCBTCEEEEEECGGGSSCSSCCCS-SSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHH
T ss_pred cCCCCcccHHHHHHHhcCCCCCeEEEEECHHHhcCCCCCCC-CCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHH
Confidence 9998 899999999999999999999999999999988632 23699999999999999988644 478889999999
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCC--CChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGS--FVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~--~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
.+..++..|+.+++.|+|++|+..|++++.+.|.+.. ......+....+...+|+|+|.||+++++|++|+.+|+++|
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al 257 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVL 257 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999876431 11222334455566789999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 395 ~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
+++|++.++|+++|.+|..+|++++|+.+|+++++++|+|+
T Consensus 258 ~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 258 TEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp HHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 99999999999999999999999999999999999999874
No 5
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=2.6e-33 Score=270.26 Aligned_cols=244 Identities=35% Similarity=0.582 Sum_probs=222.3
Q ss_pred eeeccCCCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCC
Q 013843 155 TVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGE 234 (435)
Q Consensus 155 ~~~d~~~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~ 234 (435)
.+.+++.|+++.++|+++|.|...|..++.|+|+| +|++ +|++||++
T Consensus 17 ~~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y---------------------------~g~~-~g~~fd~~----- 63 (336)
T 1p5q_A 17 RGSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVAL---------------------------EGYY-KDKLFDQR----- 63 (336)
T ss_dssp -----CCTTSEEEEEEECCCCSCCCCTTCEEEEEE---------------------------EEEE-TTEEEEEE-----
T ss_pred cceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEE---------------------------EEEE-CCEEEecC-----
Confidence 35567889999999999999988899988888755 5565 77888887
Q ss_pred CCeEEEcCCCC---cchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEecCCCCCCCh
Q 013843 235 QPLEFITDEEQ---VIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNN 311 (435)
Q Consensus 235 ~p~~~~lg~~~---v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~~~~~~~~~ 311 (435)
|++|.+|.+. ++++|+.|+..|++||++.+.++|+++||..|... ..||+++.+.|+++|.++.+..+.|.+..
T Consensus 64 -~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~~--~~i~~~~~l~f~~~L~~~~~A~~~~~~a~ 140 (336)
T 1p5q_A 64 -ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWEMNS 140 (336)
T ss_dssp -EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECTTTTTTTTCBGG--GTBCSSCCEEEEEEEEEEECCCCGGGCCH
T ss_pred -CeEEEeCCCCccccchHHHHHHhcCCCCCeEEEEECCccccCcCCCCc--cCCCCCCeEEEEEEEeecccccchhcCCH
Confidence 8999999886 59999999999999999999999999999988763 24899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHH
Q 013843 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCS 391 (435)
Q Consensus 312 ~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 391 (435)
......+..+...|+.+++.|+|++|+..|++++++.|.......+.......+...+++|+|.||+++++|++|+.+|+
T Consensus 141 ~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 141 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999887777777888889999999999999999999999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 392 KVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 392 ~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+||+++|+++++|+++|.+|..+|++++|+.+|+++++++|++
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 263 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNN 263 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999999999987
No 6
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.96 E-value=1.7e-29 Score=243.59 Aligned_cols=290 Identities=18% Similarity=0.210 Sum_probs=176.0
Q ss_pred CCCccCCcceeecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcC-CcEEecccCCCCCeeEEeCCC-ccccchHHHh
Q 013843 32 AAPLKVGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLD-GTKFDSTRDRYDPLTFKLGTG-QVATGLDNGI 109 (435)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~-g~~~~~s~~~~~p~~~~lg~~-~~~~g~~~~l 109 (435)
..+.++...+.++++||.|+++++|+| ..|+.||.|+|||++++.+ |++|++|+.++.|+.|.+|.+ ++++||+++|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l 113 (338)
T 2if4_A 35 NVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGV 113 (338)
T ss_dssp CCCCCCCSCCEEEETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHH
T ss_pred CCCCCCCcCceeCCCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHH
Confidence 344456667788999999999999999 7999999999999999984 999999987778999999999 9999999999
Q ss_pred ccccCCcEEEEEEEcCCCCCCCCCCC---CCCCCCCeEEEEEEEeeeeeeeccCCCCceEEEEEeccCCCCCCCCCCeEE
Q 013843 110 ITMKKRECAVFTFTLPSELRFGVEGR---DSLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVL 186 (435)
Q Consensus 110 ~~m~~G~~~~~~~~ip~~~~yg~~~~---~~i~~~~~l~~~v~l~~~~~~~d~~~dg~~~k~ii~~G~g~~~~~~~~~V~ 186 (435)
.+|++|++++| +|||.++||..+. +.||++++++|+|+|..+....+... -+.....
T Consensus 114 ~~m~~Ge~~~~--~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~-------------~~~~~~~----- 173 (338)
T 2if4_A 114 ASMKSGERALV--HVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKA-------------RSDMTVE----- 173 (338)
T ss_dssp HHCCBTCEEEE--EECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBT-------------TTBCCHH-----
T ss_pred hcCCCCCeEEE--EECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccc-------------cccCCHH-----
Confidence 99999999999 9999999999986 58999999999999988754221100 0000000
Q ss_pred EEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEEcCCC-CcchHHHHHHcccccCcEEEE
Q 013843 187 VKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEE-QVIAGLDRVAATMKKEEWAIV 265 (435)
Q Consensus 187 v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~-~v~~g~~~~l~~m~~Ge~~~i 265 (435)
......... ...|..+ +..|+. .-+..++.++.....
T Consensus 174 ----~~~~~a~~~--------------------~~~g~~~------------~~~g~~~~A~~~y~~Al~~~p~------ 211 (338)
T 2if4_A 174 ----ERIGAADRR--------------------KMDGNSL------------FKEEKLEEAMQQYEMAIAYMGD------ 211 (338)
T ss_dssp ----HHHHHHHHH--------------------HHHHHHT------------CSSSCCHHHHHHHHHHHHHSCH------
T ss_pred ----HHHHHHHHH--------------------HHHHHHH------------HhcCCHHHHHHHHHHHHHHhcc------
Confidence 000000000 0000000 000100 122333333322100
Q ss_pred EEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEecCCCCCCChHHHH--HHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 013843 266 TINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQGKI--EAAGRKKEEGNLLFKNGKYERAGKKYNK 343 (435)
Q Consensus 266 ~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~~~~~~~~~~~~~--~~a~~~~~~g~~~~~~g~y~~A~~~y~~ 343 (435)
...|...+ ...+.. -....+.++|..+++.|+|++|+..|++
T Consensus 212 ----~~~~~~~~--------------------------------~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 212 ----DFMFQLYG--------------------------------KYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp ----HHHHTCCH--------------------------------HHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred ----chhhhhcc--------------------------------cHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 00000000 000111 1224788999999999999999999999
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH-HhcccHHHHHH
Q 013843 344 AADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAY-MEIADLILAEL 422 (435)
Q Consensus 344 al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~-~~lg~~~eA~~ 422 (435)
+|++.|.+ ..+|+++|.+|..+++|++|+.+|+++++++|++..++..++.+. ...+..++|.+
T Consensus 256 al~~~p~~---------------~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~ 320 (338)
T 2if4_A 256 VLTEEEKN---------------PKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKE 320 (338)
T ss_dssp HHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------------------
T ss_pred HHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998765 367999999999999999999999999999999999999999984 45677889999
Q ss_pred HHHHHHHhCCCCC
Q 013843 423 DIKKAIEADPQNR 435 (435)
Q Consensus 423 ~~~~al~l~P~n~ 435 (435)
.|++++.++|+++
T Consensus 321 ~~~~~l~~~p~~~ 333 (338)
T 2if4_A 321 MYKGIFKGKDEGG 333 (338)
T ss_dssp -------------
T ss_pred HHHHhhCCCCCCC
Confidence 9999999999863
No 7
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.94 E-value=1.9e-27 Score=238.74 Aligned_cols=247 Identities=24% Similarity=0.306 Sum_probs=157.7
Q ss_pred eccC--CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCC
Q 013843 157 VDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGE 234 (435)
Q Consensus 157 ~d~~--~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~ 234 (435)
.|++ .++++.++++++|.|...|..++.|+||| +|++.||++||++ +.++
T Consensus 23 ~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y---------------------------~~~~~~g~~~dss-~~~~ 74 (457)
T 1kt0_A 23 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHY---------------------------KGKLSNGKKFDSS-HDRN 74 (457)
T ss_dssp ----------CEEEC--------CCCBTCEEEEEE---------------------------EEEC-----CBC------
T ss_pred ccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEE---------------------------EEEECCCCEEecc-CCCC
Confidence 3555 78899999999999987788999888765 4555577788887 6778
Q ss_pred CCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEecCC---------
Q 013843 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKV--------- 305 (435)
Q Consensus 235 ~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~~~--------- 305 (435)
.|++|.+|.+.+++||+.+|.+|++||++.|.|||+++||..+.++ .||++++++|+|+|+++.....
T Consensus 75 ~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~---~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~ 151 (457)
T 1kt0_A 75 EPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLP---KIPSNATLFFEIELLDFKGEDLFEDGGIIRR 151 (457)
T ss_dssp -CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEECEETTSSSSEEEE
T ss_pred CCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEChHHhccccCCCC---CCCCCCcEEEEEeeceeecccccCCcceEEE
Confidence 8999999999999999999999999999999999999999988765 6999999999999998864310
Q ss_pred ------CCCCChHH---------HH-----HH--HHHHHHHHHHHHHcCCHHHHHHHHHH----HHHHhccCC-------
Q 013843 306 ------PWEMNNQG---------KI-----EA--AGRKKEEGNLLFKNGKYERAGKKYNK----AADCVSEDG------- 352 (435)
Q Consensus 306 ------~~~~~~~~---------~~-----~~--a~~~~~~g~~~~~~g~y~~A~~~y~~----al~~~~~~~------- 352 (435)
.+..+... .+ .. .......|....-...++.|+..+++ +|.+.|...
T Consensus 152 i~~~g~~~~~p~~g~~V~v~y~g~~~g~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~ 231 (457)
T 1kt0_A 152 TKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKP 231 (457)
T ss_dssp EEECCBCSCCCCTTCEEEEEEEEEETTEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBG
T ss_pred EEecCCCCCCCCCCCEEEEEEEEEeCCeEEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCc
Confidence 11000000 00 00 00000000000001134444444444 333322100
Q ss_pred ---------------------CCC-hHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCC----------
Q 013843 353 ---------------------SFV-DDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHN---------- 400 (435)
Q Consensus 353 ---------------------~~~-~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~---------- 400 (435)
... .+.........+.++.++|.+++++++|++|+.+|++|++++|.+
T Consensus 232 ~~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~ 311 (457)
T 1kt0_A 232 KFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKA 311 (457)
T ss_dssp GGTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHH
T ss_pred ccCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHH
Confidence 000 000112333456789999999999999999999999999999998
Q ss_pred -----HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 401 -----VKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 401 -----~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
..+|+++|.||+.+++|++|+.+|++|++++|+|
T Consensus 312 ~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 350 (457)
T 1kt0_A 312 SESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSAN 350 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc
Confidence 6999999999999999999999999999999986
No 8
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.92 E-value=4.7e-25 Score=212.39 Aligned_cols=266 Identities=21% Similarity=0.275 Sum_probs=196.8
Q ss_pred eecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCc---cccchHHHhccccCCcEE
Q 013843 42 GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQ---VATGLDNGIITMKKRECA 118 (435)
Q Consensus 42 ~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~---~~~g~~~~l~~m~~G~~~ 118 (435)
.++++||.|+|+++|+|...|..||.|+|||++++ +|++||+| |+.|.+|.|. ++++|++||.+|++|+++
T Consensus 21 ~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~ 94 (336)
T 1p5q_A 21 MEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHS 94 (336)
T ss_dssp -CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred ecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcCCCCCeE
Confidence 46899999999999999668999999999999998 99999986 7999999887 588999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCC--CCCCCCeEEEEEEEeeeeeeeccCCCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCC
Q 013843 119 VFTFTLPSELRFGVEGRD--SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDG 196 (435)
Q Consensus 119 ~~~~~ip~~~~yg~~~~~--~i~~~~~l~~~v~l~~~~~~~d~~~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g 196 (435)
.+ .++|+++||..+.. .||+++.+.|++.|..+........ ..+.. .|...
T Consensus 95 ~l--~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~------~a~~~-----~p~~a-------------- 147 (336)
T 1p5q_A 95 IV--YLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWE------MNSEE-----KLEQS-------------- 147 (336)
T ss_dssp EE--EECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGG------CCHHH-----HHHHH--------------
T ss_pred EE--EECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhc------CCHHH-----HHHHH--------------
Confidence 99 99999999999977 6999999999999887753222110 00000 00000
Q ss_pred ceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEEcCCC-CcchHHHHHHcccccCcEEEEEEcCCCCCCc
Q 013843 197 TMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEE-QVIAGLDRVAATMKKEEWAIVTINHEYGFGN 275 (435)
Q Consensus 197 ~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~-~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~ 275 (435)
.... .-|..+ +..|+. .-+..++.++... |.
T Consensus 148 ~~~~--------------------~~g~~~------------~~~g~~~~A~~~y~~Al~~~-----------p~----- 179 (336)
T 1p5q_A 148 TIVK--------------------ERGTVY------------FKEGKYKQALLQYKKIVSWL-----------EY----- 179 (336)
T ss_dssp HHHH--------------------HHHHHH------------HHHTCHHHHHHHHHHHHHHT-----------TT-----
T ss_pred HHHH--------------------HHHHHH------------HHCCCHHHHHHHHHHHHHHh-----------hc-----
Confidence 0000 000000 011110 1233344444321 11
Q ss_pred cccccccccCCCCCeEEEEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCC
Q 013843 276 VEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFV 355 (435)
Q Consensus 276 ~~~~~~~~~ip~~~~l~~~iel~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~ 355 (435)
... + . ...........+..+.++|..+++.|+|++|+..|++++++.|.+
T Consensus 180 ------------~~~---------~----~-~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---- 229 (336)
T 1p5q_A 180 ------------ESS---------F----S-NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNN---- 229 (336)
T ss_dssp ------------CCC---------C----C-SHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----
T ss_pred ------------ccc---------C----C-hHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc----
Confidence 000 0 0 000112223446789999999999999999999999999998865
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHH-HHHHHHHHH
Q 013843 356 DDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILA-ELDIKKAIE 429 (435)
Q Consensus 356 ~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA-~~~~~~al~ 429 (435)
..+++++|.+|..+++|++|+.+|+++++++|++..+++.++.++..++++++| ...|++++.
T Consensus 230 -----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 230 -----------EKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp -----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999999999999999999 556776664
No 9
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.92 E-value=1.6e-24 Score=174.12 Aligned_cols=109 Identities=40% Similarity=0.635 Sum_probs=103.0
Q ss_pred eecCCCeEEEEEecCCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEE
Q 013843 42 GLGNSGIKKKLLKNGVDWDT-PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVF 120 (435)
Q Consensus 42 ~~~~~g~~~~~~~~g~g~~~-~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~ 120 (435)
+++++|++|+++++|+| .. |+.||.|+|||++++.||++|++|++++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 2 ~~~~~g~~~~~~~~G~g-~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v 80 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDG-ATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARL 80 (113)
T ss_dssp EECGGGCEEEEEECCCS-SCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEE
T ss_pred CCCCCCeEEEEEECCCC-cccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEE
Confidence 46889999999999999 55 99999999999999999999999988778999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeee
Q 013843 121 TFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (435)
Q Consensus 121 ~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~ 153 (435)
.|||+++||..+.+ .||++++++|+|+|+++
T Consensus 81 --~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 81 --TIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp --EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred --EECHHHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 99999999999865 79999999999999876
No 10
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.92 E-value=9.2e-25 Score=180.67 Aligned_cols=122 Identities=43% Similarity=0.734 Sum_probs=104.7
Q ss_pred ecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEE
Q 013843 43 LGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTF 122 (435)
Q Consensus 43 ~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~ 122 (435)
.+++||+|+++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 11 ~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v-- 88 (135)
T 1r9h_A 11 KKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEF-- 88 (135)
T ss_dssp TCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEE--
T ss_pred CCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEE--
Confidence 389999999999999955799999999999999989999999987668999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeeeeeccC--CCCceEE
Q 013843 123 TLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLS--KDGGIVK 167 (435)
Q Consensus 123 ~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~~~~d~~--~dg~~~k 167 (435)
.|||++|||..+.+ .||++++++|+|+|+.+... ++. .|++++|
T Consensus 89 ~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~-~l~~~~d~~v~k 135 (135)
T 1r9h_A 89 TIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAE-DISPDRDGTILR 135 (135)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC--------------
T ss_pred EEChHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC-CcCcCCCCcccC
Confidence 99999999998875 89999999999999999753 554 6666654
No 11
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.92 E-value=1.8e-24 Score=175.50 Aligned_cols=108 Identities=41% Similarity=0.671 Sum_probs=101.7
Q ss_pred cCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCC-------CCCeeEEeCCCccccchHHHhccccCCc
Q 013843 44 GNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDR-------YDPLTFKLGTGQVATGLDNGIITMKKRE 116 (435)
Q Consensus 44 ~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~-------~~p~~~~lg~~~~~~g~~~~l~~m~~G~ 116 (435)
.|+||+|+++++|+|...|+.||.|+|||++++.||++|++|+.. +.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 689999999999999667999999999999999999999999863 4899999999999999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCCC--CCCCCCeEEEEEEEeee
Q 013843 117 CAVFTFTLPSELRFGVEGRD--SLPPNSVVQFEVELVSW 153 (435)
Q Consensus 117 ~~~~~~~ip~~~~yg~~~~~--~i~~~~~l~~~v~l~~~ 153 (435)
+++| .|||++|||..+.+ .||++++|+|+|+|+++
T Consensus 82 ~~~v--~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARL--EIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEE--EECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEEE--EECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 9999 99999999999876 79999999999999876
No 12
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.92 E-value=7.2e-25 Score=183.30 Aligned_cols=116 Identities=38% Similarity=0.644 Sum_probs=107.6
Q ss_pred CCcce-eecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCC
Q 013843 37 VGEER-GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKR 115 (435)
Q Consensus 37 ~~~~~-~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G 115 (435)
.++++ ..+++||+|+++++|+|...|+.||.|+|||++++.||++|++|++++.|+.|.+|.+++++||+++|.+|++|
T Consensus 25 ~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~G 104 (144)
T 3o5e_A 25 QGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKG 104 (144)
T ss_dssp HCEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBT
T ss_pred ccccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCC
Confidence 44444 35899999999999999558999999999999999999999999988899999999999999999999999999
Q ss_pred cEEEEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeee
Q 013843 116 ECAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (435)
Q Consensus 116 ~~~~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~ 154 (435)
++++| +|||++|||..+.+ .||++++|+|+|+|+.++
T Consensus 105 e~~~v--~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 105 EICHL--LCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp CEEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CEEEE--EEChHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 99999 99999999999876 999999999999999875
No 13
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.91 E-value=1.5e-24 Score=177.89 Aligned_cols=115 Identities=38% Similarity=0.654 Sum_probs=106.9
Q ss_pred Ccce-eecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCc
Q 013843 38 GEER-GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (435)
Q Consensus 38 ~~~~-~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~ 116 (435)
++++ ..+++||+|+++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|+
T Consensus 10 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge 89 (128)
T 3o5q_A 10 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGE 89 (128)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred cceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCC
Confidence 4444 458999999999999995579999999999999999999999998777899999999999999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeee
Q 013843 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (435)
Q Consensus 117 ~~~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~ 154 (435)
+++| .|||++|||..+.+ .||++++|+|+|+|+.++
T Consensus 90 ~~~v--~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 90 ICHL--LCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp EEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEE--EEChHHcCCCCCCCCCcCCCCEEEEEEEEEEec
Confidence 9999 99999999999876 899999999999999875
No 14
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.91 E-value=3.7e-24 Score=176.19 Aligned_cols=110 Identities=40% Similarity=0.688 Sum_probs=104.6
Q ss_pred eeecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEE
Q 013843 41 RGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVF 120 (435)
Q Consensus 41 ~~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~ 120 (435)
+.++++|++|+++++|+| ..|+.||.|+|||++++.||++|++++++++|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 23 ~~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v 101 (133)
T 2y78_A 23 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 101 (133)
T ss_dssp CEECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEE
T ss_pred cEECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 467999999999999999 8999999999999999999999999988778999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeee
Q 013843 121 TFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (435)
Q Consensus 121 ~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~ 153 (435)
.|||+++||..+.+ .|||+++++|+|+|+++
T Consensus 102 --~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 102 --TIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp --EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred --EECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 99999999999876 79999999999999864
No 15
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.91 E-value=4.8e-24 Score=184.61 Aligned_cols=123 Identities=27% Similarity=0.441 Sum_probs=112.3
Q ss_pred CCCccCCcceeecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeeEEeCCC-ccccchHHHh
Q 013843 32 AAPLKVGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTG-QVATGLDNGI 109 (435)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~-~g~~~~~s~~~~~p~~~~lg~~-~~~~g~~~~l 109 (435)
+.+.+....+.++++||+|+++++|+| ..|+.||.|+|||++++. +|++|++|+.++.|+.|.+|.+ ++++||+++|
T Consensus 35 ~~p~~~~~~~~~~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL 113 (180)
T 2f4e_A 35 NVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGV 113 (180)
T ss_dssp CSCCCCCSCCEEEETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHH
T ss_pred cCCcccCCCcEECCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHH
Confidence 334456667788999999999999999 799999999999999998 6999999998789999999999 9999999999
Q ss_pred ccccCCcEEEEEEEcCCCCCCCCCCC---CCCCCCCeEEEEEEEeeeeeee
Q 013843 110 ITMKKRECAVFTFTLPSELRFGVEGR---DSLPPNSVVQFEVELVSWITVV 157 (435)
Q Consensus 110 ~~m~~G~~~~~~~~ip~~~~yg~~~~---~~i~~~~~l~~~v~l~~~~~~~ 157 (435)
.+|++|++++| .|||+++||..+. +.||++++++|+|+|+.+....
T Consensus 114 ~gMk~Ge~~~v--~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~ 162 (180)
T 2f4e_A 114 ASMKSGERALV--HVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETK 162 (180)
T ss_dssp TTCCBTCEEEE--EECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBC
T ss_pred hCCCCCCEEEE--EECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCc
Confidence 99999999999 9999999999985 5899999999999999987544
No 16
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.91 E-value=2.6e-23 Score=200.72 Aligned_cols=154 Identities=35% Similarity=0.576 Sum_probs=145.2
Q ss_pred ecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEE
Q 013843 43 LGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTF 122 (435)
Q Consensus 43 ~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~ 122 (435)
..+.++.++++++|.|+.+|..||.|+|||++++.||++|+++. ++.|.+|.+++++||+++|.+|++||++++
T Consensus 124 ~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~~----~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~-- 197 (356)
T 3jxv_A 124 AKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKSE----GVEFTVKDGHLCPALAKAVKTMKKGEKVLL-- 197 (356)
T ss_dssp TSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEEE----EEEEEGGGCSSSHHHHHHHTTCCBTCEEEE--
T ss_pred ccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEeccC----CEEEEeCCCCcchHHHHHHhhCCCCCEEEE--
Confidence 36799999999999999999999999999999999999999873 699999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCC------CCCCCCeEEEEEEEeeeeeeeccCCCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCC
Q 013843 123 TLPSELRFGVEGRD------SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDG 196 (435)
Q Consensus 123 ~ip~~~~yg~~~~~------~i~~~~~l~~~v~l~~~~~~~d~~~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g 196 (435)
+|||+++||..+.+ .||++++|.|+|+|+++....++..|+++.++++++|.|+..|..++.|++||..++.+|
T Consensus 198 ~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG 277 (356)
T 3jxv_A 198 AVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDG 277 (356)
T ss_dssp EECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSS
T ss_pred EEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCC
Confidence 99999999999865 499999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeec
Q 013843 197 TMVAKT 202 (435)
Q Consensus 197 ~~v~~~ 202 (435)
+++.++
T Consensus 278 ~~fd~~ 283 (356)
T 3jxv_A 278 TVFLKK 283 (356)
T ss_dssp CEEEEE
T ss_pred CEEeec
Confidence 877655
No 17
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.91 E-value=9.2e-25 Score=184.22 Aligned_cols=114 Identities=20% Similarity=0.256 Sum_probs=98.5
Q ss_pred eecCCCeEEEEEecCCCCCC--CCCCCEEEEEEEEEEc--CCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcE
Q 013843 42 GLGNSGIKKKLLKNGVDWDT--PEFGDEVTIHYVGTLL--DGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (435)
Q Consensus 42 ~~~~~g~~~~~~~~g~g~~~--~~~gd~V~v~y~~~~~--~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~ 117 (435)
+++.+||+|+++++|+| .. ++.||.|+|||++++. ||++||||+++++|+.|.+|.+++|+||+++|.+|++|++
T Consensus 6 ~~~~~Gv~~~vl~~G~G-~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~ 84 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRG-ELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEI 84 (165)
T ss_dssp HHHTTSCCCCEEECCSS-CCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCE
T ss_pred cccCCCeEEEEEECCcC-CCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCce
Confidence 57899999999999999 54 3689999999999996 4999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCCCCCCC-------C--CCC-----------------------------CCCCCeEEEEEEEeeeeeeec
Q 013843 118 AVFTFTLPSELRFGVE-------G--RDS-----------------------------LPPNSVVQFEVELVSWITVVD 158 (435)
Q Consensus 118 ~~~~~~ip~~~~yg~~-------~--~~~-----------------------------i~~~~~l~~~v~l~~~~~~~d 158 (435)
++| +|||++|||.. + ... +++.++|+|+|||+++..+.+
T Consensus 85 ~~~--~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 85 AQF--LCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp EEE--ECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTT
T ss_pred EEE--EECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcc
Confidence 999 99999999921 0 012 233467999999999976543
No 18
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.91 E-value=6.3e-24 Score=173.72 Aligned_cols=114 Identities=28% Similarity=0.470 Sum_probs=105.5
Q ss_pred ceeecCCCeEEEEEecCCC-CCCCCCCCEEEEEEEEEEc-CCcEEecccC--CCCCeeEEeCCCccccchHHHhccccCC
Q 013843 40 ERGLGNSGIKKKLLKNGVD-WDTPEFGDEVTIHYVGTLL-DGTKFDSTRD--RYDPLTFKLGTGQVATGLDNGIITMKKR 115 (435)
Q Consensus 40 ~~~~~~~g~~~~~~~~g~g-~~~~~~gd~V~v~y~~~~~-~g~~~~~s~~--~~~p~~~~lg~~~~~~g~~~~l~~m~~G 115 (435)
.+.++++|++|+++++|++ +..|+.||.|+|||++++. ||++|++|+. .+.|+.|.+|.+++++||+++|.+|++|
T Consensus 6 ~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~G 85 (125)
T 4dip_A 6 GALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVG 85 (125)
T ss_dssp GGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTT
T ss_pred ceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 3467899999999999982 2899999999999999998 9999999974 4589999999999999999999999999
Q ss_pred cEEEEEEEcCCCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q 013843 116 ECAVFTFTLPSELRFGVEGRDSLPPNSVVQFEVELVSWIT 155 (435)
Q Consensus 116 ~~~~~~~~ip~~~~yg~~~~~~i~~~~~l~~~v~l~~~~~ 155 (435)
++++| .|||++|||..+.+.||++++++|+|+|+++..
T Consensus 86 e~~~~--~ip~~~aYG~~g~~~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 86 EKRKL--IIPPALGYGKEGKGKIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp CEEEE--EECGGGTTTTTCBTTBCTTCCEEEEEEEEEEEC
T ss_pred CEEEE--EEChHHhcCCCCCCCCCCCCeEEEEEEEEEEEc
Confidence 99999 999999999999889999999999999999853
No 19
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.90 E-value=1.9e-23 Score=175.95 Aligned_cols=110 Identities=30% Similarity=0.453 Sum_probs=101.2
Q ss_pred eecCCCe-EEEEEecCCCC-CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEE
Q 013843 42 GLGNSGI-KKKLLKNGVDW-DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAV 119 (435)
Q Consensus 42 ~~~~~g~-~~~~~~~g~g~-~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~ 119 (435)
.++++|+ +|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++++
T Consensus 38 ~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~ 113 (157)
T 2jwx_A 38 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 113 (157)
T ss_dssp ESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEEE
T ss_pred eECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence 4788997 89999999992 38999999999999999999999984 789999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCC-CC-CCCCCCeEEEEEEEeeeeeee
Q 013843 120 FTFTLPSELRFGVEG-RD-SLPPNSVVQFEVELVSWITVV 157 (435)
Q Consensus 120 ~~~~ip~~~~yg~~~-~~-~i~~~~~l~~~v~l~~~~~~~ 157 (435)
| +||++++||..+ .+ .||++++++|+|+|+++...+
T Consensus 114 v--~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 114 V--TADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp E--EECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECS
T ss_pred E--EECchhcCCcccccCCCcCCCCeEEEEEEEEEEEccc
Confidence 9 999999999998 55 899999999999999987544
No 20
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.90 E-value=1.1e-23 Score=172.85 Aligned_cols=110 Identities=40% Similarity=0.725 Sum_probs=102.7
Q ss_pred eecCCCeEEE--EEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEE
Q 013843 42 GLGNSGIKKK--LLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAV 119 (435)
Q Consensus 42 ~~~~~g~~~~--~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~ 119 (435)
..+++|++|+ ++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++
T Consensus 18 ~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~ 97 (130)
T 2lgo_A 18 GPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKAL 97 (130)
T ss_dssp SSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEE
T ss_pred eeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence 5689999999 99999994339999999999999998999999999877899999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeee
Q 013843 120 FTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (435)
Q Consensus 120 ~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~ 153 (435)
| .|||+++||..+.+ .||++++++|+|+|+++
T Consensus 98 v--~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 98 F--TIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp E--EECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred E--EECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 9 99999999999876 79999999999999864
No 21
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.90 E-value=5.1e-24 Score=181.49 Aligned_cols=113 Identities=32% Similarity=0.551 Sum_probs=105.5
Q ss_pred CcceeecCCCeEEEEEecCCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCc
Q 013843 38 GEERGLGNSGIKKKLLKNGVDWDT-PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (435)
Q Consensus 38 ~~~~~~~~~g~~~~~~~~g~g~~~-~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~ 116 (435)
...+.++++||+|+++++|+| .. |+.||.|+|||++++.||++|++|+.++.|+.|.+| ++++||+++|.+|++|+
T Consensus 29 ~~~~~~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge 105 (167)
T 1jvw_A 29 QPDAVKLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPN--EVIKGWTEALQLMREGD 105 (167)
T ss_dssp STTEEECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECGG--GSCHHHHHHHTTCCTTC
T ss_pred CCCcEECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEeC--chhHHHHHHHcCCCCCC
Confidence 345688999999999999999 66 999999999999999999999999887789999995 99999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeee
Q 013843 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWIT 155 (435)
Q Consensus 117 ~~~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~~ 155 (435)
+++| +|||++|||..+.+ .|||+++++|+|+|+++..
T Consensus 106 ~~~~--~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~ 143 (167)
T 1jvw_A 106 RWRL--FIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKD 143 (167)
T ss_dssp EEEE--EECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGG
T ss_pred EEEE--EECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEc
Confidence 9999 99999999999876 8999999999999999864
No 22
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.90 E-value=1.1e-23 Score=167.60 Aligned_cols=105 Identities=33% Similarity=0.668 Sum_probs=98.7
Q ss_pred CeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCC
Q 013843 47 GIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPS 126 (435)
Q Consensus 47 g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~ 126 (435)
||+|+++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++| .|||
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~--~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKL--TISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEE--EECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEE--EECH
Confidence 79999999999944499999999999999999999999987668999999999999999999999999999999 9999
Q ss_pred CCCCCCCCCC-CCCCCCeEEEEEEEeee
Q 013843 127 ELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (435)
Q Consensus 127 ~~~yg~~~~~-~i~~~~~l~~~v~l~~~ 153 (435)
+++||..+.+ .||++++++|+|+|+++
T Consensus 79 ~~ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 79 DYAYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp GGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred HHccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 9999999875 89999999999999876
No 23
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.90 E-value=2.2e-23 Score=171.39 Aligned_cols=116 Identities=40% Similarity=0.590 Sum_probs=103.7
Q ss_pred CcceeecCCCeEE-EEEecC-CC-CCCCCCCCEEEEEEEEEE-cCCcEEecccCCCCCeeEEeCCCccccchHHHhcccc
Q 013843 38 GEERGLGNSGIKK-KLLKNG-VD-WDTPEFGDEVTIHYVGTL-LDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMK 113 (435)
Q Consensus 38 ~~~~~~~~~g~~~-~~~~~g-~g-~~~~~~gd~V~v~y~~~~-~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~ 113 (435)
.+.+.++++|+.| +++++| +| +..|+.||.|+|||++++ .||++|++|+.++.|+.|.+|.+++++||+++|.+|+
T Consensus 7 ~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~ 86 (129)
T 2vn1_A 7 FEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMR 86 (129)
T ss_dssp CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCC
T ss_pred cCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCC
Confidence 3455677777766 588977 44 388999999999999999 7999999999877899999999999999999999999
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeee
Q 013843 114 KRECAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWIT 155 (435)
Q Consensus 114 ~G~~~~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~~ 155 (435)
+|++++| .|||++|||..+.+ .||++++++|+|+|+++..
T Consensus 87 ~Ge~~~v--~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 87 KNEKCLV--RIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TTCEEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCEEEE--EEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 9999999 99999999999875 7999999999999999864
No 24
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.90 E-value=9.9e-24 Score=186.26 Aligned_cols=110 Identities=27% Similarity=0.438 Sum_probs=103.4
Q ss_pred CCcceeecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCc
Q 013843 37 VGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (435)
Q Consensus 37 ~~~~~~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~ 116 (435)
..+.+.++++||+|+++++|+| ..|..||.|+|||++++.||++|++| +.|+.|.+| ++++||+++|.+|++|+
T Consensus 108 ~~~gv~~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Ge 181 (219)
T 3oe2_A 108 AKPGVKELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGA 181 (219)
T ss_dssp TSTTCEECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTC
T ss_pred cCCCcEECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCC
Confidence 3445678999999999999999 89999999999999999999999999 589999998 89999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeee
Q 013843 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (435)
Q Consensus 117 ~~~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~ 154 (435)
+++| +|||++|||..+.+ .|||+++|+|+|+|+++.
T Consensus 182 k~~v--~IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 182 KWRL--VIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp EEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEE--EECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 9999 99999999999988 599999999999999875
No 25
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.90 E-value=5.9e-24 Score=175.59 Aligned_cols=110 Identities=30% Similarity=0.522 Sum_probs=96.5
Q ss_pred eecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEE
Q 013843 42 GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVF 120 (435)
Q Consensus 42 ~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~-~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~ 120 (435)
.++++||+|+++++|+| ..++.||.|+|||++++. +|++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 22 v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v 100 (134)
T 3b7x_A 22 ISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARF 100 (134)
T ss_dssp SSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEEEE
T ss_pred eeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEEEE
Confidence 45899999999999999 788899999999999988 6999999987778999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeee
Q 013843 121 TFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (435)
Q Consensus 121 ~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~ 154 (435)
.|||++|||..+.+ .||++++++|+|+|+++.
T Consensus 101 --~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 101 --LFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp --EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred --EECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 99999999999876 799999999999999874
No 26
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.90 E-value=2.5e-23 Score=184.04 Aligned_cols=112 Identities=30% Similarity=0.464 Sum_probs=105.3
Q ss_pred CcceeecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcE
Q 013843 38 GEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (435)
Q Consensus 38 ~~~~~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~ 117 (435)
...+.++++|++|+++++|+| ..|+.||.|+|||++++.||++|++|+.++.|+.|.+| ++++||+++|.+|++|++
T Consensus 98 ~~~v~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek 174 (213)
T 1fd9_A 98 KPGVVVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGST 174 (213)
T ss_dssp STTEEECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEGG--GSCHHHHHHHTTCCTTCE
T ss_pred cCCcEECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEcC--chhhHHHHHHcCCCCCCE
Confidence 445788999999999999999 89999999999999999999999999887789999995 899999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeee
Q 013843 118 AVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (435)
Q Consensus 118 ~~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~ 154 (435)
++| +|||+++||..+.+ .||++++++|+|+|+++.
T Consensus 175 ~~v--~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~ 210 (213)
T 1fd9_A 175 WEI--YVPSGLAYGPRSVGGPIGPNETLIFKIHLISVK 210 (213)
T ss_dssp EEE--EECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEE
T ss_pred EEE--EECchhccCccCCCCCCCCCCeEEEEEEEEEEE
Confidence 999 99999999999875 899999999999999885
No 27
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.89 E-value=8.4e-24 Score=173.69 Aligned_cols=112 Identities=34% Similarity=0.551 Sum_probs=104.4
Q ss_pred cceeecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhcc------c
Q 013843 39 EERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIIT------M 112 (435)
Q Consensus 39 ~~~~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~------m 112 (435)
..+.++++||+|+++++|+| ..|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+ |
T Consensus 5 ~~~~~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m 83 (129)
T 1u79_A 5 CEFSVSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPM 83 (129)
T ss_dssp CCCEECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCC
T ss_pred CccEECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhccccccccc
Confidence 34578999999999999999 8899999999999999989999999987668999999999999999999998 9
Q ss_pred cCCcEEEEEEEcCCCCCCCCCCC------CCCCCCCeEEEEEEEeee
Q 013843 113 KKRECAVFTFTLPSELRFGVEGR------DSLPPNSVVQFEVELVSW 153 (435)
Q Consensus 113 ~~G~~~~~~~~ip~~~~yg~~~~------~~i~~~~~l~~~v~l~~~ 153 (435)
++|++++| .|||+++||..+. +.||++++++|+|+|+++
T Consensus 84 ~~Ge~~~v--~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 84 LTGGKRTL--RIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp BTTCEEEE--EECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCCCEEEE--EEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999 9999999999885 379999999999999876
No 28
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.89 E-value=4.3e-23 Score=182.87 Aligned_cols=110 Identities=40% Similarity=0.686 Sum_probs=105.0
Q ss_pred eeecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEE
Q 013843 41 RGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVF 120 (435)
Q Consensus 41 ~~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~ 120 (435)
+.++++|++|+++++|+| ..|+.||.|+|||++++.||++|++|++++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 99 ~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v 177 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 177 (209)
T ss_dssp CEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEE
T ss_pred ccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEE
Confidence 567999999999999999 7899999999999999999999999998889999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeee
Q 013843 121 TFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (435)
Q Consensus 121 ~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~ 153 (435)
.|||++|||..+.+ .||++++|+|+|+|+++
T Consensus 178 --~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 178 --TIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp --EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred --EECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999987 69999999999999864
No 29
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.89 E-value=4.7e-23 Score=183.50 Aligned_cols=111 Identities=32% Similarity=0.628 Sum_probs=104.7
Q ss_pred CcceeecCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcE
Q 013843 38 GEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (435)
Q Consensus 38 ~~~~~~~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~ 117 (435)
.+.+.++++||+|+++++|+| ..|+.||.|+|||++++.||++|++|+.++.|+.|.+| ++++||+++|.+|++|++
T Consensus 113 ~~~v~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek 189 (224)
T 1q6h_A 113 EKGVKTSSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGK 189 (224)
T ss_dssp STTEEECTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEGG--GSCHHHHHHGGGSCTTCE
T ss_pred CCCeEECCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEcC--CcchhHHHHHcCCCCCCE
Confidence 355677999999999999999 89999999999999999999999999988889999995 999999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCCCCeEEEEEEEeee
Q 013843 118 AVFTFTLPSELRFGVEGRDSLPPNSVVQFEVELVSW 153 (435)
Q Consensus 118 ~~~~~~ip~~~~yg~~~~~~i~~~~~l~~~v~l~~~ 153 (435)
++| +|||+++||..+.+.||++++++|+|+|+++
T Consensus 190 ~~v--~IP~~laYG~~g~~~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 190 IKL--VIPPELAYGKAGVPGIPPNSTLVFDVELLDV 223 (224)
T ss_dssp EEE--EECGGGTTTTTCBTTBCTTCCEEEEEEEEEE
T ss_pred EEE--EECchhhcCcCCCCCCCCCCEEEEEEEEEEe
Confidence 999 9999999999988789999999999999886
No 30
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.88 E-value=1.8e-22 Score=163.22 Aligned_cols=108 Identities=31% Similarity=0.455 Sum_probs=99.5
Q ss_pred eeecCCC-eEEEEEecCCCC-CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEE
Q 013843 41 RGLGNSG-IKKKLLKNGVDW-DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECA 118 (435)
Q Consensus 41 ~~~~~~g-~~~~~~~~g~g~-~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~ 118 (435)
+.++++| ++|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|+++
T Consensus 7 ~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~ 82 (118)
T 2awg_A 7 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 82 (118)
T ss_dssp EESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEE
T ss_pred eEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEE
Confidence 4667777 999999999993 28999999999999998899999984 78999999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCC-CCCCCCeEEEEEEEeeee
Q 013843 119 VFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (435)
Q Consensus 119 ~~~~~ip~~~~yg~~~~~-~i~~~~~l~~~v~l~~~~ 154 (435)
+| .|||++|||..+.+ .||++++++|+|+|+++.
T Consensus 83 ~~--~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 83 MV--TADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp EE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EE--EEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 99 99999999999876 899999999999998874
No 31
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=3.3e-22 Score=165.26 Aligned_cols=112 Identities=30% Similarity=0.442 Sum_probs=101.5
Q ss_pred eeecCCC-eEEEEEecCCCC-CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEE
Q 013843 41 RGLGNSG-IKKKLLKNGVDW-DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECA 118 (435)
Q Consensus 41 ~~~~~~g-~~~~~~~~g~g~-~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~ 118 (435)
+.++++| ++|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|+++
T Consensus 11 ~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~ 86 (135)
T 2d9f_A 11 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 86 (135)
T ss_dssp EESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEE
T ss_pred cEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence 4667777 999999999992 38999999999999999999999973 78999999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCC-CC-CCCCCCeEEEEEEEeeeeeeec
Q 013843 119 VFTFTLPSELRFGVEG-RD-SLPPNSVVQFEVELVSWITVVD 158 (435)
Q Consensus 119 ~~~~~ip~~~~yg~~~-~~-~i~~~~~l~~~v~l~~~~~~~d 158 (435)
+| .|||+++||..+ .+ .||++++++|+|+|+.+....+
T Consensus 87 ~v--~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 87 MV--TADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp EE--EECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCS
T ss_pred EE--EEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCc
Confidence 99 999999999998 54 8999999999999999875443
No 32
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.84 E-value=8.6e-21 Score=149.29 Aligned_cols=95 Identities=39% Similarity=0.653 Sum_probs=89.6
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCCCCCCCCCCC-CC
Q 013843 60 DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRD-SL 138 (435)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~~yg~~~~~-~i 138 (435)
..++.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++| .|||+++||..+.+ .|
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v--~ip~~~ayG~~~~~~~I 81 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKL--VIPSELGYGERGAPPKI 81 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEE--EECGGGTTTTTCBTTTB
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEE--EECHHHCcCCCCCCCCc
Confidence 6899999999999999889999999988778999999999999999999999999999999 99999999999876 79
Q ss_pred CCCCeEEEEEEEeeeeee
Q 013843 139 PPNSVVQFEVELVSWITV 156 (435)
Q Consensus 139 ~~~~~l~~~v~l~~~~~~ 156 (435)
|++++++|+|+|+++...
T Consensus 82 p~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 82 PGGATLVFEVELLKIERR 99 (102)
T ss_dssp CTTCCEEEEEEEEEEGGG
T ss_pred CcCCeEEEEEEEEEeccc
Confidence 999999999999998653
No 33
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.84 E-value=5.7e-20 Score=153.50 Aligned_cols=115 Identities=34% Similarity=0.546 Sum_probs=102.3
Q ss_pred eeccC--CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCC
Q 013843 156 VVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (435)
Q Consensus 156 ~~d~~--~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~ 233 (435)
..|++ .|++++++++++|.|...|..++.|+||| ++++.||++||++ +.+
T Consensus 26 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y---------------------------~g~~~dG~~fdss-~~~ 77 (144)
T 3o5e_A 26 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHY---------------------------KGKLSNGKKFDSS-HDR 77 (144)
T ss_dssp CEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEE---------------------------EEECTTSCEEEES-GGG
T ss_pred cccccccCCCeEEEEEEECCCCCccCCCCCEEEEEE---------------------------EEEECCCCEEEee-ccc
Confidence 34555 78999999999999988898999888755 5556678888888 777
Q ss_pred CCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEE
Q 013843 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (435)
Q Consensus 234 ~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~ 301 (435)
++|+.|.+|.+++++||+.+|.+|++||++.|.|||+++||..+... .||++++|+|+|+|+++.
T Consensus 78 ~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ipp~~aYG~~g~~~---~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 78 NEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP---KIPSNATLFFEIELLDFK 142 (144)
T ss_dssp TSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEE
T ss_pred CCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEEChHHCcCCCCCCC---CcCCCCeEEEEEEEEEec
Confidence 89999999999999999999999999999999999999999998864 699999999999999886
No 34
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.82 E-value=1.3e-19 Score=156.78 Aligned_cols=127 Identities=29% Similarity=0.495 Sum_probs=98.1
Q ss_pred CCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEec-CCcEEeecCCCCCCCeEEE
Q 013843 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYDGEQPLEFI 240 (435)
Q Consensus 162 dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~-~g~~f~~~~~~~~~p~~~~ 240 (435)
+.++.++++++|.|. .|..++.|++|| ++++. +|++|+++ |.++.|+.|.
T Consensus 48 ~~gl~~~vl~~G~G~-~~~~Gd~V~v~Y---------------------------~g~l~~dG~~fdss-~~~~~p~~f~ 98 (180)
T 2f4e_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHY---------------------------RAWTKNSQHKFEDT-WHEQQPIELV 98 (180)
T ss_dssp ETTEEEEEEECCBSC-CBCTTCEEEEEE---------------------------EEEETTTCCEEEET-TTTTCCEEEE
T ss_pred CCceEEEEEeCCCCC-CCCCCCEEEEEE---------------------------EEEECCCCcEEecc-CccCCCEEEE
Confidence 346888999999986 788888888765 44444 57888888 7778999999
Q ss_pred cCCC-CcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEecCC---CCCCChHHHHH
Q 013843 241 TDEE-QVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKV---PWEMNNQGKIE 316 (435)
Q Consensus 241 lg~~-~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~~~---~~~~~~~~~~~ 316 (435)
+|.+ .+++||+.+|.+|++||++.|.|||+++||..+... ...||++++++|+|+|+++....+ .|+|+.++++.
T Consensus 99 lG~g~~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~-~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~ 177 (180)
T 2f4e_A 99 LGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIG 177 (180)
T ss_dssp TTSCCGGGHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBSS-SSCBCTTCCEEEEEEEEEESCBCCC-------------
T ss_pred eCCCCchhHHHHHHHhCCCCCCEEEEEECchHhCCcCCccc-CCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHh
Confidence 9999 999999999999999999999999999999988631 125999999999999999998887 89999999987
Q ss_pred HH
Q 013843 317 AA 318 (435)
Q Consensus 317 ~a 318 (435)
.|
T Consensus 178 ~A 179 (180)
T 2f4e_A 178 AA 179 (180)
T ss_dssp --
T ss_pred hc
Confidence 76
No 35
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.82 E-value=1.8e-19 Score=147.55 Aligned_cols=111 Identities=34% Similarity=0.551 Sum_probs=99.3
Q ss_pred CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEE
Q 013843 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (435)
Q Consensus 161 ~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~ 240 (435)
.|+++.++++++|+|...|..++.|+++| ++++.||++||++ +.+++|++|.
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y---------------------------~g~~~dG~~fdss-~~~~~p~~f~ 68 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHY---------------------------KGKLSNGKKFDSS-HDRNEPFVFS 68 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEE---------------------------EEEETTSCEEEEH-HHHTSCEEEE
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEE---------------------------EEEECCCCEEEec-CCCCCCEEEE
Confidence 78899999999999987888999888755 5555677888887 6678899999
Q ss_pred cCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEe
Q 013843 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (435)
Q Consensus 241 lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~ 302 (435)
+|.+++++||+.+|.+|++||++.|.+||+++||..+... .||++++++|+|+|+++..
T Consensus 69 lG~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~---~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 69 LGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP---KIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp TTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEEC
T ss_pred ECCCCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCCC---CcCCCCEEEEEEEEEEecC
Confidence 9999999999999999999999999999999999998764 6999999999999998863
No 36
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.81 E-value=5.9e-19 Score=142.89 Aligned_cols=110 Identities=35% Similarity=0.517 Sum_probs=94.4
Q ss_pred CCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCC-------CC
Q 013843 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYD-------GE 234 (435)
Q Consensus 162 dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~-------~~ 234 (435)
+.++.++++++|+|...|..++.|++||. +++.||++||++ +. .+
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~---------------------------g~~~dG~~fdss-~~~~~~~~~~~ 54 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYT---------------------------GTLPDGTVFDTN-IQTSSKKKKNA 54 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEE---------------------------EECTTSCEEEEC-CCCSSSTTTTC
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEE---------------------------EEECCCCEEEec-cccccccccCC
Confidence 45789999999999888999999887664 444567777776 43 25
Q ss_pred CCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEE
Q 013843 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (435)
Q Consensus 235 ~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~ 301 (435)
+|+.|.+|.+++++||+.+|.+|++||++.|.|||+++||+.+... ..||++++++|+|+|+++.
T Consensus 55 ~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~--~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 55 KPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPD--AKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp CCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCTTCBGG--GTBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEECcHHhcCCCCCCC--CccCcCCeEEEEEEEEEeC
Confidence 8999999999999999999999999999999999999999988753 2599999999999999863
No 37
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.81 E-value=5.4e-20 Score=155.10 Aligned_cols=117 Identities=17% Similarity=0.243 Sum_probs=92.0
Q ss_pred CCCceEEEEEeccCCCCC-CCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEec--CCcEEeecCCCCCCCe
Q 013843 161 KDGGIVKKILEKGERDAS-PGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE--DGTVFEKKGYDGEQPL 237 (435)
Q Consensus 161 ~dg~~~k~ii~~G~g~~~-~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~--~g~~f~~~~~~~~~p~ 237 (435)
.+.++.++++++|.|..+ +.+++.|+|| |+|++. ||++|||| +++++|+
T Consensus 8 ~~~Gv~~~vl~~G~G~~p~~~~G~~V~vh---------------------------Y~g~l~d~~G~~FDsS-~~rg~P~ 59 (165)
T 2lkn_A 8 REDGIQKRVIQEGRGELPDFQDGTKATFH---------------------------YRTLHSDDEGTVLDDS-RARGKPM 59 (165)
T ss_dssp HTTSCCCCEEECCSSCCCCCCTTCEEEEE---------------------------CEEECSSSSCCEEEES-TTTTCCE
T ss_pred cCCCeEEEEEECCcCCCCCCCCCCEEEEE---------------------------EEEEEeCCCccEEEec-ccCCCCE
Confidence 356788999999999754 3567887765 556653 48999999 8999999
Q ss_pred EEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCcc-----------cccc-cc----------------------c
Q 013843 238 EFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNV-----------EAKR-DL----------------------A 283 (435)
Q Consensus 238 ~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~-----------~~~~-~~----------------------~ 283 (435)
+|.||.+++|+||+.+|.+|++||++.|+|||+++||.. +..+ .. .
T Consensus 60 ~f~lG~g~vI~Gwd~gl~~M~~Ge~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~ 139 (165)
T 2lkn_A 60 ELIIGKKFKLPVWETIVCTMREGEIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDA 139 (165)
T ss_dssp EEESSSSCSCSHHHHHHTTCCTTCEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTH
T ss_pred EEEecCCCccHHHHHHHhcCccCceEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeecccccccccccccc
Confidence 999999999999999999999999999999999999931 0000 00 0
Q ss_pred cCCCCCeEEEEEEEEEEEecCC
Q 013843 284 TIPSCAKLYYEVEMMDFIKEKV 305 (435)
Q Consensus 284 ~ip~~~~l~~~iel~~~~~~~~ 305 (435)
.+++.++|+|+|||+++..+.+
T Consensus 140 li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 140 LQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp HHHSCCCCEEEEEEEEEECTTT
T ss_pred ccCCCCCeEEEEEEEEEcCCcc
Confidence 1233467999999999997654
No 38
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.80 E-value=6.6e-19 Score=144.33 Aligned_cols=105 Identities=30% Similarity=0.501 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
+.++.++++|+.+++.|+|++|+..|++++++.|.+. .+|+++|.||.++|++++|+.+|+++++
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENA---------------ILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999988764 6799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
++|+++.+|+++|.+|..+|++++|+.+|+++++++|+|.
T Consensus 76 ~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 9999999999999999999999999999999999999873
No 39
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.80 E-value=6.7e-19 Score=145.39 Aligned_cols=117 Identities=36% Similarity=0.582 Sum_probs=101.8
Q ss_pred eeccC--CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCC
Q 013843 156 VVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (435)
Q Consensus 156 ~~d~~--~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~ 233 (435)
+.|++ .++++.++++++|.|...|..++.|++|| ++++.||++||++ +.+
T Consensus 5 ~~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y---------------------------~g~~~dG~~fdss-~~~ 56 (135)
T 1r9h_A 5 KIDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHY---------------------------VGTLENGTKFDSS-RDR 56 (135)
T ss_dssp CEECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEE---------------------------EEEETTSCEEEEH-HHH
T ss_pred ceecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEE---------------------------EEEECCCCEEEec-CcC
Confidence 44666 78899999999999987788888888765 4555578888887 555
Q ss_pred CCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEec
Q 013843 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKE 303 (435)
Q Consensus 234 ~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~ 303 (435)
++|++|.+|.+++++||+.+|.+|++||++.|.+||+++||+.+... .||++++++|+++|+++...
T Consensus 57 ~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~---~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 57 GDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPP---KIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp TSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEEC-
T ss_pred CCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCCC---CcCcCCcEEEEEEEEEeecC
Confidence 78999999999999999999999999999999999999999988754 69999999999999999753
No 40
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.80 E-value=2.1e-18 Score=141.50 Aligned_cols=116 Identities=35% Similarity=0.693 Sum_probs=99.3
Q ss_pred eeccCCCCceEEEEEecc-CC-CCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEe-cCCcEEeecCCC
Q 013843 156 VVDLSKDGGIVKKILEKG-ER-DASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARL-EDGTVFEKKGYD 232 (435)
Q Consensus 156 ~~d~~~dg~~~k~ii~~G-~g-~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~-~~g~~f~~~~~~ 232 (435)
..+++.+|.++++++++| .| ...|..++.|+++|. +++ .||++||++ +.
T Consensus 9 ~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~---------------------------g~~~~dG~~fd~s-~~ 60 (129)
T 2vn1_A 9 KVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYV---------------------------GKLESTGKVFDSS-FD 60 (129)
T ss_dssp EEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEE---------------------------EEETTTCCEEEEG-GG
T ss_pred CcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEE---------------------------EEECCCCeEEEec-CC
Confidence 345678888999999987 55 467888888887664 444 578888888 66
Q ss_pred CCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEe
Q 013843 233 GEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (435)
Q Consensus 233 ~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~ 302 (435)
++.|++|.+|.+.+++||+.+|.+|++||++.|.+||+++||..+... .||++++++|+|+|+++.+
T Consensus 61 ~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~---~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 61 RNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGE---SIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TTCCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEEC
T ss_pred CCccEEEEeCCCCcCHHHHHHHhCCCCCCEEEEEEChHHcCCCCCCCC---CcCCCCeEEEEEEEEEEec
Confidence 678999999999999999999999999999999999999999988754 6999999999999999875
No 41
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.79 E-value=2.6e-18 Score=137.70 Aligned_cols=107 Identities=26% Similarity=0.400 Sum_probs=93.9
Q ss_pred CceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEEcC
Q 013843 163 GGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITD 242 (435)
Q Consensus 163 g~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~lg 242 (435)
.++.++++++|.|...+..++.|+++| ++++.||++||++ +.+++|++|.+|
T Consensus 6 ~g~~~~~~~~G~g~~~~~~gd~V~v~y---------------------------~~~~~dG~~~d~s-~~~~~p~~f~lG 57 (113)
T 1yat_A 6 GNVKIDRISPGDGATFPKTGDLVTIHY---------------------------TGTLENGQKFDSS-VDRGSPFQCNIG 57 (113)
T ss_dssp GGCEEEEEECCCSSCCCCTTCEEEEEE---------------------------EEEETTSCEEEES-TTTTCCEEEETT
T ss_pred CCeEEEEEECCCCcccCCCCCEEEEEE---------------------------EEEECCCCEEEec-CCCCCcEEEEeC
Confidence 467889999999976688888888765 4555578888888 666789999999
Q ss_pred CCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEE
Q 013843 243 EEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (435)
Q Consensus 243 ~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~ 300 (435)
.+++++||+.+|.+|++||++.|.+||+++||+.+... .||++++++|+++|+++
T Consensus 58 ~~~~i~g~e~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~---~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 58 VGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPG---LIPPNSTLVFDVELLKV 112 (113)
T ss_dssp SSSSCHHHHHHGGGCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEE
T ss_pred CCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCC---CcCCCCeEEEEEEEEEe
Confidence 99999999999999999999999999999999988764 69999999999999886
No 42
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.78 E-value=1.3e-18 Score=146.19 Aligned_cols=121 Identities=17% Similarity=0.145 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHH
Q 013843 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCS 391 (435)
Q Consensus 312 ~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 391 (435)
-.....+..+++.|+.+++.|+|++|+..|++||++.|..+... ..........+|+|+|.|+.++|+|++|+.+|+
T Consensus 5 ~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~ 81 (159)
T 2hr2_A 5 LKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALHSAD 81 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 34467889999999999999999999999999999999854321 001122345589999999999999999999999
Q ss_pred HHHhh-------CCCCHHHH----HHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 392 KVLDC-------DCHNVKAL----YRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 392 ~al~~-------~p~~~~a~----~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
+||++ +|++.++| |++|.++..+|++++|+.+|++|++++|+|+
T Consensus 82 kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 82 KALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 99999 99999999 9999999999999999999999999999874
No 43
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.78 E-value=1.8e-18 Score=137.24 Aligned_cols=106 Identities=27% Similarity=0.529 Sum_probs=92.3
Q ss_pred ceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEEcCC
Q 013843 164 GIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDE 243 (435)
Q Consensus 164 ~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~ 243 (435)
++.++++++|+|...+..+|.|+++| ++++.||++||++ +.+++|++|.+|.
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y---------------------------~~~~~dG~~~d~s-~~~~~p~~f~lG~ 52 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHY---------------------------TGMLEDGKKFDSS-RDRNKPFKFMLGK 52 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEE---------------------------EEEETTSCEEEEH-HHHTSCEEEETTS
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEE---------------------------EEEECCCCEEEec-CCCCCCEEEEeCC
Confidence 46788999999977688888888765 4455577788887 5556899999999
Q ss_pred CCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEE
Q 013843 244 EQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (435)
Q Consensus 244 ~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~ 300 (435)
+++++||+.+|.+|++||++.|.+||+++||+.+... .||++++++|+++|+++
T Consensus 53 ~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~---~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 53 QEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPG---IIPPHATLVFDVELLKL 106 (107)
T ss_dssp CCSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEE
T ss_pred CChHHHHHHHHhCCCCCCEEEEEECHHHccCCCCCCC---CcCCCCeEEEEEEEEEe
Confidence 9999999999999999999999999999999988764 69999999999999886
No 44
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.78 E-value=3.8e-19 Score=150.70 Aligned_cols=125 Identities=22% Similarity=0.351 Sum_probs=98.0
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCCCCCCCCCCCCCCC
Q 013843 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (435)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~~yg~~~~~~i~~ 140 (435)
.++.||.|+|||++++.||++|++|+.+++|+.|.+|.+++++||+++|.+|++|++++| .|||++|||+++
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v--~Ipp~~AYG~~~------ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTF--SLEPDAAFGVPS------ 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEE--EECGGGTTCCCC------
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEE--EEChHHhcCCCC------
Confidence 589999999999999999999999987778999999999999999999999999999999 999999999986
Q ss_pred CCeEEEEEEEeeeeeeecc---------CCCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeee
Q 013843 141 NSVVQFEVELVSWITVVDL---------SKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (435)
Q Consensus 141 ~~~l~~~v~l~~~~~~~d~---------~~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~ 201 (435)
..++..+....+.....+ ..+|....-++.+- +++.|++|+||++++.++.|+
T Consensus 96 -~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v-------~~~~V~vD~NHPLAGk~L~F~ 157 (169)
T 4dt4_A 96 -PDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREI-------NGDSITVDFNHPLAGQTVHFD 157 (169)
T ss_dssp -GGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEE-------ETTEEEEECSCTTTTCCEEEE
T ss_pred -hHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEE-------cCCEEEEeCCCccCCCEEEEE
Confidence 445555544433211111 12333222222221 457999999999999998885
No 45
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=143.49 Aligned_cols=114 Identities=26% Similarity=0.488 Sum_probs=90.9
Q ss_pred eeccCCCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEec-CCcEEeecCCCCC
Q 013843 156 VVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYDGE 234 (435)
Q Consensus 156 ~~d~~~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~-~g~~f~~~~~~~~ 234 (435)
+.+++.++++.++++++|.|.. +..++.|++|| ++++. +|++||++ +.++
T Consensus 19 ~~~v~~~~gl~~~vl~~G~g~~-~~~gd~V~v~Y---------------------------~g~l~~~G~~fdss-~~~~ 69 (134)
T 3b7x_A 19 MLDISGDRGVLKDVIREGAGDL-VAPDASVLVKY---------------------------SGYLEHMDRPFDSN-YFRK 69 (134)
T ss_dssp CEESSSSSSEEEEEEECCEEEE-CCTTCEEEEEE---------------------------EEECTTCSSCSEEC-----
T ss_pred cceeeCCCCEEEEEEEcCCCCC-CCCCCEEEEEE---------------------------EEEECCCCeEEEec-CCCC
Confidence 4577889999999999999864 44677777655 44544 47778777 6667
Q ss_pred CCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEE
Q 013843 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (435)
Q Consensus 235 ~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~ 301 (435)
+|++|.+|.+.+++||+.+|.+|++||++.|.|||+++||..+... .||++++++|+|+|+++.
T Consensus 70 ~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~---~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 70 TPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPP---LIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp ---CEEC-CCCCCHHHHHHHHTCEETCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEcCCcchhHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCC---CcCcCCeEEEEEEEEEEe
Confidence 8999999999999999999999999999999999999999988764 699999999999999875
No 46
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.77 E-value=4.7e-18 Score=145.15 Aligned_cols=124 Identities=27% Similarity=0.330 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccC---CCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHH
Q 013843 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSED---GSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAI 387 (435)
Q Consensus 311 ~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~---~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 387 (435)
.+++++.+..+++.|+.+++.|+|++|+..|.+++.+.+.. ....++++.........+|+|+|.||+++++|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 35678899999999999999999999999999999985432 123345566677788899999999999999999999
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 388 ELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 388 ~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+|+++|+++|+++++|+++|.+|..+|++++|+.+|+++++++|+|
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999986
No 47
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.77 E-value=5.4e-18 Score=144.24 Aligned_cols=121 Identities=23% Similarity=0.363 Sum_probs=101.2
Q ss_pred CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEE
Q 013843 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (435)
Q Consensus 161 ~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~ 240 (435)
.+.++.++++++|.|...|..++.|+||| +|++.||++||++ +.++.|++|.
T Consensus 35 ~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y---------------------------~g~l~dG~~fdss-~~~g~p~~f~ 86 (167)
T 1jvw_A 35 LPSGLVFQRIARGSGKRAPAIDDKCEVHY---------------------------TGRLRDGTVFDSS-RERGKPTTFR 86 (167)
T ss_dssp CTTSCEEEEEECCCCSBCCCTTCCEEEEE---------------------------EEECTTSCEEEEH-HHHTSCEEEC
T ss_pred CCCCEEEEEEEcCCCCcCCCCCCEEEEEE---------------------------EEEECCCCEEeec-cccCCCEEEE
Confidence 45678889999999976688888888755 5666688889888 6667899999
Q ss_pred cCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEecCCCCCCChHHHHH
Q 013843 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQGKIE 316 (435)
Q Consensus 241 lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~~~~~~~~~~~~~~ 316 (435)
+ +++++||+.+|.+|++||++.|.|||+++||..+... .||++++++|+|+|+++.+. .|.++..+..+
T Consensus 87 l--g~vI~G~eeaL~gMk~Ge~~~~~Ip~~laYG~~g~~~---~Ipp~s~LiF~VeL~~i~~~--~~~~~~~e~~~ 155 (167)
T 1jvw_A 87 P--NEVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGG---MIPPYSPLEFDVELISIKDG--GKGRTAEEVDE 155 (167)
T ss_dssp G--GGSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCSSS---SSCTTCCEEEEEEEEEEGGG--CCSCBHHHHHH
T ss_pred e--CchhHHHHHHHcCCCCCCEEEEEECchhhCCCCCCCC---CcCCCCeEEEEEEEEEEEcC--CCCCCHHHHHH
Confidence 9 4899999999999999999999999999999988754 69999999999999999854 45566666433
No 48
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.77 E-value=7.5e-18 Score=137.95 Aligned_cols=104 Identities=32% Similarity=0.476 Sum_probs=90.4
Q ss_pred EEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEEcCCCC
Q 013843 166 VKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEEQ 245 (435)
Q Consensus 166 ~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~ 245 (435)
.|+++++|+|...+..+|.|+++| ++++.||++||++ +..++|++|.+|.++
T Consensus 27 ~K~~l~~G~G~~~~~~gd~V~v~Y---------------------------~g~~~dG~~fdss-~~~~~p~~f~lG~g~ 78 (130)
T 2lgo_A 27 EKKVLTPGDGVTKPQAGKKVTVHY---------------------------DGRFPDGKQFDSS-RSRGKPFQFTLGAGE 78 (130)
T ss_dssp CEEEEECCCSSCCCCTTSEEEEEE---------------------------EEECTTSCEEECT-TTTTCCEEEETTSTT
T ss_pred EEEEEeccCCCccCCCCCEEEEEE---------------------------EEEECCCCEEEcc-CcCCCCEEEEeCCCC
Confidence 345999999987688889888766 4455577888887 666789999999999
Q ss_pred cchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEE
Q 013843 246 VIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (435)
Q Consensus 246 v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~ 300 (435)
+++||+.+|.+|++||++.|.+||.++||+.+... .||++++++|+|+|+++
T Consensus 79 vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~---~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 79 VIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPP---VIPPKATLVFEVELLAV 130 (130)
T ss_dssp SCHHHHHHHHHSCTTEEEEEEECTTTSTTTTCCST---TSCSSCCEEEEEEEEEC
T ss_pred ccHHHHHHHhCCCCCCEEEEEECcHHHCCCCCCCC---CcCCCCeEEEEEEEEEC
Confidence 99999999999999999999999999999988764 69999999999999864
No 49
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.76 E-value=1.1e-17 Score=134.99 Aligned_cols=112 Identities=29% Similarity=0.366 Sum_probs=96.6
Q ss_pred eeeccCCCCceEEEEEeccCCC-CCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCC
Q 013843 155 TVVDLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (435)
Q Consensus 155 ~~~d~~~dg~~~k~ii~~G~g~-~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~ 233 (435)
.+.+++.++.+.++++++|.|. ..|..++.|+++|.. ++.||++|+++
T Consensus 5 ~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g---------------------------~~~dG~~~ds~---- 53 (118)
T 2awg_A 5 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQT---------------------------SLENGTRVQEE---- 53 (118)
T ss_dssp CEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEE---------------------------ECTTSCEEEEE----
T ss_pred cceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEE---------------------------EECCCCEEECC----
Confidence 3567788998999999999985 478888888876644 44566777764
Q ss_pred CCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEE
Q 013843 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (435)
Q Consensus 234 ~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~ 301 (435)
+|++|.+|.+++++||+.+|.+|++||++.|.+||+++||..+... .||++++++|+|+|+++.
T Consensus 54 -~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~---~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 54 -PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSP---YIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp -EEEEEETTSSCSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEE
T ss_pred -CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEEChHHccCCCCCCC---ccCCCCeEEEEEEEEEec
Confidence 6999999999999999999999999999999999999999988764 699999999999999875
No 50
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.76 E-value=5.1e-18 Score=142.30 Aligned_cols=124 Identities=23% Similarity=0.347 Sum_probs=98.1
Q ss_pred CCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCCCCCCCCCCCCC
Q 013843 60 DTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSL 138 (435)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~-~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~~yg~~~~~~i 138 (435)
+.++.||.|++||++++. ||++|++|+.. .|+.|.+|.+++++||+++|.+|++|++++| .|||+.|||.++
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v--~ipp~~aYG~~~---- 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEV--VIAPEEAYGVYE---- 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTTCCBTCEEEE--EECGGGTTCSSC----
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcCCCCCCEEEE--EEecHHHcCCCC----
Confidence 568899999999999998 99999999864 8999999999999999999999999999999 999999999986
Q ss_pred CCCCeEEEEEEEeeeeeeeccC---------CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeee
Q 013843 139 PPNSVVQFEVELVSWITVVDLS---------KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (435)
Q Consensus 139 ~~~~~l~~~v~l~~~~~~~d~~---------~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~ 201 (435)
..+++.+....+ ....+. .+|....-++.+ -+++.|++++||+++|.++.|+
T Consensus 78 ---~~~v~~v~~~~f-~~~~~~~G~~~~~~~~~G~~~~~~V~~-------v~~~~v~vD~NHPLAG~~L~F~ 138 (151)
T 2kr7_A 78 ---SSYLQEVPRDQF-EGIELEKGMSVFGQTEDNQTIQAIIKD-------FSATHVMVDYNHPLAGKTLAFR 138 (151)
T ss_dssp ---SCEEEEEEGGGG-TTSCCCTTCEEEEEETTTEEEEEEEEE-------ECSSEEEEEECCTTSCCCEEEE
T ss_pred ---cceEEEEcHHHc-CCCCCccCCEEEEECCCCCEEEEEEEE-------ECCCEEEEECCCcCCCCEEEEE
Confidence 446666665555 111111 233222222222 2557999999999999998885
No 51
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.76 E-value=9.5e-18 Score=141.11 Aligned_cols=114 Identities=28% Similarity=0.345 Sum_probs=97.2
Q ss_pred eeccCCCCceEEEEEeccCCC-CCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCC
Q 013843 156 VVDLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGE 234 (435)
Q Consensus 156 ~~d~~~dg~~~k~ii~~G~g~-~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~ 234 (435)
+.+++.+|.+.++++++|+|. ..|..+|.|+|+| ++++.||++||++
T Consensus 36 ~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y---------------------------~g~l~dG~~fds~----- 83 (157)
T 2jwx_A 36 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHL---------------------------QTSLENGTRVQEE----- 83 (157)
T ss_dssp CEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEE---------------------------EEECTTSCEEEEE-----
T ss_pred cceECCCCCEEEEEEEccCCCccCCCCCCEEEEEE---------------------------EEEECCCCEeecC-----
Confidence 345678888889999999984 5788888888755 5555677888764
Q ss_pred CCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccc-cccccccCCCCCeEEEEEEEEEEEecC
Q 013843 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE-AKRDLATIPSCAKLYYEVEMMDFIKEK 304 (435)
Q Consensus 235 ~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~-~~~~~~~ip~~~~l~~~iel~~~~~~~ 304 (435)
+|++|.+|.+++++||+.+|.+|++||++.|.||++++||..+ ... .||++++++|+|+|+++....
T Consensus 84 ~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~~~---~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 84 PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSP---YIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp EEEEEETTTTSSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCSSS---CCCTTCCEEEEEEEEEEEECS
T ss_pred CCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEECchhcCCcccccCC---CcCCCCeEEEEEEEEEEEccc
Confidence 6999999999999999999999999999999999999999988 443 699999999999999998654
No 52
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.76 E-value=1.1e-17 Score=137.41 Aligned_cols=108 Identities=31% Similarity=0.453 Sum_probs=93.6
Q ss_pred CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEE
Q 013843 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (435)
Q Consensus 161 ~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~ 240 (435)
.+.++.++++++|.| ..+..+|.|+++| ++++.||++||++ +++++|++|.
T Consensus 26 ~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y---------------------------~g~~~dG~~fdss-~~~~~p~~f~ 76 (133)
T 2y78_A 26 TESGLKYEDLTEGSG-AEARAGQTVSVHY---------------------------TGWLTDGQKFDSS-KDRNDPFAFV 76 (133)
T ss_dssp CTTSCEEEEEECCSS-CBCCTTSEEEEEE---------------------------EEEETTSCEEEET-TTTTCCEEEE
T ss_pred CCCCEEEEEEEcCCC-CCCCCCCEEEEEE---------------------------EEEECCCCEEecc-CcCCCCEEEE
Confidence 456788899999998 4677888888765 4555578888888 6778899999
Q ss_pred cCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEE
Q 013843 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (435)
Q Consensus 241 lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~ 300 (435)
+|.+.+++||+.+|.+|++||++.|.+|++++||+.+... .|||+++++|+|+|+++
T Consensus 77 lG~g~vi~G~eeaL~gmk~Ge~~~v~ip~~~aYG~~~~~~---~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 77 LGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGG---VIPPNATLVFEVELLDV 133 (133)
T ss_dssp TTSSSSCHHHHHHSTTCBTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEC
T ss_pred eCCCChhHHHHHHHcCCCCCCEEEEEECcHHhCCCCCCCC---CCCCCCeEEEEEEEEEC
Confidence 9999999999999999999999999999999999988764 69999999999999864
No 53
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.75 E-value=2.3e-17 Score=146.00 Aligned_cols=111 Identities=29% Similarity=0.436 Sum_probs=96.5
Q ss_pred ccCCCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCe
Q 013843 158 DLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPL 237 (435)
Q Consensus 158 d~~~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~ 237 (435)
.+..+.++.++++++|.|.. |..++.|+++| ++++.||++||++ +.++.|+
T Consensus 99 ~~~~~sGl~~~vl~~G~G~~-~~~gd~V~v~Y---------------------------~g~l~dG~~fdss-~~~~~P~ 149 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSGAE-ARAGQTVSVHY---------------------------TGWLTDGQKFDSS-KDRNDPF 149 (209)
T ss_dssp CEECTTSCEEEEEECCCSCB-CCTTCEEEEEE---------------------------EEEETTSCEEEES-GGGTCCE
T ss_pred ccCCCCceEEEEEEcCCCCc-CCCCCEEEEEE---------------------------EEEECCCCEEEEc-cccCCCE
Confidence 34466788999999999864 78888887655 5556678888888 7778999
Q ss_pred EEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEE
Q 013843 238 EFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (435)
Q Consensus 238 ~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~ 300 (435)
+|.+|.+.+++||+.+|.+|++||++.|.+||+++||+.+... .||++++++|+|+|+++
T Consensus 150 ~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~~~---~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 150 AFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAG---VIPPNATLVFEVELLDV 209 (209)
T ss_dssp EEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEC
T ss_pred EEEeCCCccchhHHHHHhCCCCCCEEEEEECcHHhCCCCCCCC---CcCCCCeEEEEEEEEEC
Confidence 9999999999999999999999999999999999999998765 69999999999999864
No 54
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.74 E-value=3.8e-17 Score=133.27 Aligned_cols=113 Identities=22% Similarity=0.325 Sum_probs=95.3
Q ss_pred cCCCCceEEEEEeccCC-CCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEec-CCcEEeecCCC--CC
Q 013843 159 LSKDGGIVKKILEKGER-DASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYD--GE 234 (435)
Q Consensus 159 ~~~dg~~~k~ii~~G~g-~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~-~g~~f~~~~~~--~~ 234 (435)
+..+.++.++++++|.+ ...+..++.|++|| ++++. ||++||++ +. .+
T Consensus 8 ~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y---------------------------~g~~~~dG~~fdss-~~~~~~ 59 (125)
T 4dip_A 8 LIPEPEVKIEVLQKPFICHRKTKGGDLMLVHY---------------------------EGYLEKDGSLFHST-HKHNNG 59 (125)
T ss_dssp GCCCCCCEEEEEECCSCCSCCCCTTCEEEEEE---------------------------EEEETTTCCEEEEH-HHHTTT
T ss_pred EECCCCeEEEEEEcCCCCCCcCCCCCEEEEEE---------------------------EEEECCCCcEEEEc-ccCCCC
Confidence 34567888899999873 35777888887755 55555 77888887 52 46
Q ss_pred CCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEec
Q 013843 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKE 303 (435)
Q Consensus 235 ~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~~ 303 (435)
+|++|.+|.+++++||+.+|.+|++||++.|.+||+++||+.+.. .||++++++|+|+|+++.+.
T Consensus 60 ~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~~----~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 60 QPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGKG----KIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp CCEEEETTSCSSCHHHHHHSTTCCTTCEEEEEECGGGTTTTTCBT----TBCTTCCEEEEEEEEEEECC
T ss_pred cCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEEChHHhcCCCCCC----CCCCCCeEEEEEEEEEEEcC
Confidence 899999999999999999999999999999999999999998854 59999999999999998753
No 55
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.74 E-value=9.9e-19 Score=146.80 Aligned_cols=128 Identities=27% Similarity=0.363 Sum_probs=92.8
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCC-------------CCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCC
Q 013843 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDR-------------YDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSE 127 (435)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~g~~~~~s~~~-------------~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~ 127 (435)
.+++||.|+|||++++ ||++|++|+.. ++|+.|.+|.+++++||+++|.+|++|++++| .|||+
T Consensus 1 ~i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v--~Ipp~ 77 (157)
T 3pr9_A 1 MVEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREV--VLPPE 77 (157)
T ss_dssp CCCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEE--EECGG
T ss_pred CCCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEE--EECcH
Confidence 3689999999999999 99999999752 37999999999999999999999999999999 99999
Q ss_pred CCCCCCCCCCCCCCCeEEEEEEEeeeeeeeccC-CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeee
Q 013843 128 LRFGVEGRDSLPPNSVVQFEVELVSWITVVDLS-KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (435)
Q Consensus 128 ~~yg~~~~~~i~~~~~l~~~v~l~~~~~~~d~~-~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~ 201 (435)
+|||.++. .++..+....+... ++. ..|..+.- ....+...--.++.|++++||++++.++.|+
T Consensus 78 ~aYG~~~~-------~~V~~v~~~~f~~~-~~~~~~G~~~~~--~~~~~~V~~v~~~~V~vD~NHPLAG~~L~F~ 142 (157)
T 3pr9_A 78 KAFGKRDP-------SKIKLIPLSEFTKR-GIKPIKGLTITI--DGIPGKIVSINSGRVLVDFNHELAGKEVKYR 142 (157)
T ss_dssp GTTCCCCG-------GGEEEEEHHHHHHT-TCCCCTTCEEEE--TTEEEEEEEEETTEEEEECSCTTTTCCEEEE
T ss_pred HhcCCCCh-------HhEEEcCHHHCCcc-cCCcCCCcEEEe--cCCCeEEEEEcCCEEEEECCCccCCCeEEEE
Confidence 99999863 34444443333210 111 11111100 0000111112457999999999999998885
No 56
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.74 E-value=9.3e-18 Score=155.63 Aligned_cols=106 Identities=27% Similarity=0.554 Sum_probs=97.8
Q ss_pred cCCCeEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCc---cccchHHHhccccCCcEEEE
Q 013843 44 GNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQ---VATGLDNGIITMKKRECAVF 120 (435)
Q Consensus 44 ~~~g~~~~~~~~g~g~~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~---~~~g~~~~l~~m~~G~~~~~ 120 (435)
.++|+.|+++++|+|...|+.||.|+|||++++ ||++|++ .|+.|.+|.++ +++||+++|.+|++|++++|
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~-----~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v 239 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ-----RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIV 239 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-----EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEE
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-----CCeEEEecCCcccccchhHHHHHhCCCCCcEEEE
Confidence 789999999999999667999999999999998 9999997 47999999988 59999999999999999999
Q ss_pred EEEcCCCCCCCCCCCC--CCCCCCeEEEEEEEeeeeeee
Q 013843 121 TFTLPSELRFGVEGRD--SLPPNSVVQFEVELVSWITVV 157 (435)
Q Consensus 121 ~~~ip~~~~yg~~~~~--~i~~~~~l~~~v~l~~~~~~~ 157 (435)
.|||+++||..+.+ .||++++++|+|+|+++....
T Consensus 240 --~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~~ 276 (280)
T 1q1c_A 240 --YLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAK 276 (280)
T ss_dssp --EECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCC
T ss_pred --EEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCCC
Confidence 99999999999865 699999999999999987544
No 57
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=138.19 Aligned_cols=121 Identities=27% Similarity=0.307 Sum_probs=101.3
Q ss_pred eeeccCCCCceEEEEEeccCCC-CCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCC
Q 013843 155 TVVDLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (435)
Q Consensus 155 ~~~d~~~dg~~~k~ii~~G~g~-~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~ 233 (435)
.+.+++.++.+.++++++|.|. ..|..++.|+++|. +++.||++|+++
T Consensus 9 ~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~---------------------------g~~~dG~~fds~---- 57 (135)
T 2d9f_A 9 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQ---------------------------TSLENGTRVQEE---- 57 (135)
T ss_dssp SCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEE---------------------------EEESSSCEEEEE----
T ss_pred cCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEE---------------------------EEECCCCEEecC----
Confidence 3457788888999999999984 57888888887664 444567777764
Q ss_pred CCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccc-cccccccCCCCCeEEEEEEEEEEEecCCCCCCC
Q 013843 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE-AKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMN 310 (435)
Q Consensus 234 ~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~-~~~~~~~ip~~~~l~~~iel~~~~~~~~~~~~~ 310 (435)
+|++|.+|.+++++||+.+|.+|++||++.|.+|++++||..+ ... .||++++++|+|+|+++....+...++
T Consensus 58 -~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~ip~~~aYG~~~~~~~---~Ip~~~~l~f~vel~~v~~~~~~e~~s 131 (135)
T 2d9f_A 58 -PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSP---YIPPHAALCLEVTLKTAVDRPDLEMSG 131 (135)
T ss_dssp -EEEEEETTSCCSCTTTTTTGGGSCTTCEEEEEECHHHHTCTTCCSSS---CCCTTCCEEEEEEEEEEESSCSSSSCC
T ss_pred -CCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEEChhHccCcCCcCCC---ccCCCCeEEEEEEEEEeecCCchhhcC
Confidence 6999999999999999999999999999999999999999988 443 699999999999999999766554443
No 58
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.73 E-value=1.8e-16 Score=139.98 Aligned_cols=142 Identities=34% Similarity=0.386 Sum_probs=121.1
Q ss_pred EEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChH-HHHHHHHHHHHHHh
Q 013843 293 YEVEMMDFIKEKVPWEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDD-EQKLVKSLRVSCWL 371 (435)
Q Consensus 293 ~~iel~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~ 371 (435)
....+..+.+.++.|+++..++...+..+...|+.++..|+|++|+..|.+++.+.|.+...... .......+...+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (198)
T 2fbn_A 13 GRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNL 92 (198)
T ss_dssp ---------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH
Confidence 34456778889999999999999999999999999999999999999999999998876644332 22333455678899
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 372 NSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 372 nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++|.||.++++|++|+.+|+++++++|++..+++++|.+|..+|++++|+.+|+++++++|++
T Consensus 93 ~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 93 NLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 59
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.73 E-value=2.1e-17 Score=140.86 Aligned_cols=123 Identities=18% Similarity=0.201 Sum_probs=94.7
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCCCCCCCCCCCCCCC
Q 013843 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (435)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~~yg~~~~~~i~~ 140 (435)
+++.||.|+|+|++++.||++|++|+.. +|+.|.+|.+++++||+++|.+|++|++++| .|||+.|||.++.
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v--~ippe~aYG~~~~----- 73 (171)
T 2k8i_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDV--AVGANDAYGQYDE----- 73 (171)
T ss_dssp CCCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEE--EEETTTSSCCCCT-----
T ss_pred cCCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEE--EECcHHhcCCCCh-----
Confidence 3789999999999998899999999875 8999999999999999999999999999999 9999999999863
Q ss_pred CCeEEEEEEEeeeeeeeccC---------CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeee
Q 013843 141 NSVVQFEVELVSWITVVDLS---------KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (435)
Q Consensus 141 ~~~l~~~v~l~~~~~~~d~~---------~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~ 201 (435)
.+++.+....+.....+. .+|.+..+|+. -..+.|++++|+++++.++.|+
T Consensus 74 --~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~--------v~~~~V~vD~NHPLAGk~L~F~ 133 (171)
T 2k8i_A 74 --NLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITA--------VEDDHVVVDGNHMLAGQNLKFN 133 (171)
T ss_dssp --TSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEE--------ECSSEEEEESCCSSCCCEEEEE
T ss_pred --hhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEE--------EcCCEEEEeCCCCCCCCeEEEE
Confidence 344555444332111111 12221112222 1457999999999999998885
No 60
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.73 E-value=1.2e-17 Score=145.16 Aligned_cols=130 Identities=17% Similarity=0.188 Sum_probs=94.7
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCCCCCCCCCCCCCCC
Q 013843 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (435)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~~yg~~~~~~i~~ 140 (435)
++++||+|+|+|++++.||++|++|+.. +|+.|.+|.+++++||+++|.+|++|++++| .|||++|||.++..
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v--~Ippe~aYGe~~~~---- 74 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDV--AVGANDAYGQYDEN---- 74 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEE--ECSTTTTSSCCCTT----
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEE--EeCcHHhcCCCChh----
Confidence 3789999999999998899999999875 8999999999999999999999999999999 99999999998643
Q ss_pred CCeEEEEEEEeeeeeeeccCCCCceEEEEEecc--CCCCCCCCCCeEEEEEEEEeCCCceeee
Q 013843 141 NSVVQFEVELVSWITVVDLSKDGGIVKKILEKG--ERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (435)
Q Consensus 141 ~~~l~~~v~l~~~~~~~d~~~dg~~~k~ii~~G--~g~~~~~~~~~V~v~~~~~~~~g~~v~~ 201 (435)
+++.|....+.....+ ..|..+......| .+...-.+.+.|+++||++|++.++.|+
T Consensus 75 ---lV~~vp~~~f~~~~~~-~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~ 133 (196)
T 2kfw_A 75 ---LVQRVPKDVFMGVDEL-QVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFN 133 (196)
T ss_dssp ---TCEEECGGGCCCSSCC-CTTCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCEEE
T ss_pred ---hEEEEEHHHCCCccCc-ccCCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEE
Confidence 3444433333211111 1111111000000 0112233568999999999999998885
No 61
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.71 E-value=2.3e-18 Score=144.43 Aligned_cols=123 Identities=22% Similarity=0.443 Sum_probs=93.4
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccC-------------CCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCC
Q 013843 61 TPEFGDEVTIHYVGTLLDGTKFDSTRD-------------RYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSE 127 (435)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~g~~~~~s~~-------------~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~ 127 (435)
+++.||.|+|||++++.||++|++|+. ...|+.|.+|.+++++||+++|.+|++|++++| .|||+
T Consensus 1 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v--~ipp~ 78 (151)
T 1ix5_A 1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTV--KIPAE 78 (151)
T ss_dssp CCCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEE--EECTT
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEE--EECcH
Confidence 468999999999999889999999973 237999999999999999999999999999999 99999
Q ss_pred CCCCCCCCCCCCCCCeEEEEEEEeeeeee-ecc------CCCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceee
Q 013843 128 LRFGVEGRDSLPPNSVVQFEVELVSWITV-VDL------SKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVA 200 (435)
Q Consensus 128 ~~yg~~~~~~i~~~~~l~~~v~l~~~~~~-~d~------~~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~ 200 (435)
+|||.++.. +++.+.+..+... ..+ .-.+ ..-.|+.- .++.|++++||+++|.++.|
T Consensus 79 ~aYG~~~~~-------~v~~v~~~~f~~~~~~~~~G~~~~~~~-~~~~V~~v--------~~~~v~vD~NHPLAG~~L~F 142 (151)
T 1ix5_A 79 KAYGNRNEM-------LIQKIPRDAFKEADFEPEEGMVILAEG-IPATITEV--------TDNEVTLDFNHELAGKDLVF 142 (151)
T ss_dssp TSSCSCCST-------TBCCEETHHHHTSTTCCCTTEEEESSS-CEEEEEEE--------ETTEEEEECCCSSTTCCEEE
T ss_pred HHCCCCCcc-------EEEEEEHHHcCccCCcccccCEEEECC-eEEEEEEE--------cCCEEEEeCCCCCCCCeEEE
Confidence 999998743 3444444333210 001 0111 11122221 45799999999999999888
Q ss_pred e
Q 013843 201 K 201 (435)
Q Consensus 201 ~ 201 (435)
+
T Consensus 143 ~ 143 (151)
T 1ix5_A 143 T 143 (151)
T ss_dssp E
T ss_pred E
Confidence 5
No 62
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.71 E-value=9.1e-17 Score=141.77 Aligned_cols=104 Identities=27% Similarity=0.417 Sum_probs=91.2
Q ss_pred CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEE
Q 013843 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (435)
Q Consensus 161 ~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~ 240 (435)
-+.++.++++++|+|. .|..++.|+|+ |++++.||++||++ +.|++|.
T Consensus 115 ~~sGl~y~vl~~G~G~-~p~~gd~V~V~---------------------------Y~g~l~dG~vfDss----~~P~~f~ 162 (219)
T 3oe2_A 115 LADGILMTELTPGTGP-KPDANGRVEVR---------------------------YVGRLPDGKIFDQS----TQPQWFR 162 (219)
T ss_dssp CGGGCEEEEEECCCSC-CCCTTSEEEEE---------------------------EEEECTTSCEEEEC----SSCEEEE
T ss_pred CCCCeEEEEEecCCCc-cCCCCCEEEEE---------------------------EEEEECCCCEeecc----CCcEEEE
Confidence 4567888999999985 67788887764 56666788889886 6899999
Q ss_pred cCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEE
Q 013843 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (435)
Q Consensus 241 lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~ 301 (435)
+| ++|+||+.+|.+|++|+++.|.|||+++||+.+... .|||+++|+|+|+|+++.
T Consensus 163 lG--~vI~G~eeaL~gMk~Gek~~v~IPp~lAYG~~g~~~---~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 163 LD--SVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGD---LIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GG--GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEE
T ss_pred ec--chhHHHHHHHhCCCCCCEEEEEECchhcCCCCCCCC---CCCCCCeEEEEEEEEEEe
Confidence 97 899999999999999999999999999999998864 699999999999999986
No 63
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.70 E-value=1.4e-16 Score=130.55 Aligned_cols=105 Identities=24% Similarity=0.362 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHH
Q 013843 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (435)
Q Consensus 314 ~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 393 (435)
..+.+..++++|+.+++.|+|++|+..|++||++.|.+. .+|+|+|.||+++++|++|+.+|+++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~---------------~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNI---------------TFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 456788999999999999999999999999999988753 67999999999999999999999999
Q ss_pred HhhCCCC-------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 394 LDCDCHN-------VKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 394 l~~~p~~-------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
++++|++ .++|+++|.++..++++++|+++|+++|+++|+
T Consensus 69 l~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 69 VEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 9998876 368999999999999999999999999999886
No 64
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.70 E-value=8.8e-18 Score=149.32 Aligned_cols=122 Identities=30% Similarity=0.409 Sum_probs=91.9
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCC-------------CCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCC
Q 013843 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDR-------------YDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSE 127 (435)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~g~~~~~s~~~-------------~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~ 127 (435)
.++.||.|+|||++++ ||++|++|+.. +.|+.|.+|.+++++||+++|.+|++|+++++ .|||+
T Consensus 1 ~i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v--~Ippe 77 (231)
T 3prb_A 1 MVEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREV--VLPPE 77 (231)
T ss_dssp CCCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEE--EECGG
T ss_pred CCCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEE--EeCcH
Confidence 3689999999999999 99999999752 37999999999999999999999999999999 99999
Q ss_pred CCCCCCCCCCCCCCCeEEEEEEEeeeeeeeccC-CCCce------EEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceee
Q 013843 128 LRFGVEGRDSLPPNSVVQFEVELVSWITVVDLS-KDGGI------VKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVA 200 (435)
Q Consensus 128 ~~yg~~~~~~i~~~~~l~~~v~l~~~~~~~d~~-~dg~~------~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~ 200 (435)
+|||.++. .++..+....+.. .++. ..|.. .-.|+. -.++.|++|+||+++|.++.|
T Consensus 78 ~AYGe~~~-------~lv~~vp~~~f~~-~~~~~~vG~~~~~~~~~g~V~~--------v~~~~V~vD~NHPLAGk~L~F 141 (231)
T 3prb_A 78 KAFGKRDP-------SKIKLIPLSEFTK-RGIKPIKGLTITIDGIPGKIVS--------INSGRVLVDFNHELAGKEVKY 141 (231)
T ss_dssp GTTCCCCG-------GGEEEEETHHHHT-TTCCCCTTCEEEETTEEEEEEE--------EETTEEEEECSCTTTTCCEEE
T ss_pred HhcCCCCh-------HHEEecCHHHCCc-ccCCCCCCcEEEecCCCEEEEE--------EcCCEEEEeCCCccCCCEEEE
Confidence 99999874 3444443332211 0010 00111 112221 245799999999999999888
Q ss_pred e
Q 013843 201 K 201 (435)
Q Consensus 201 ~ 201 (435)
+
T Consensus 142 ~ 142 (231)
T 3prb_A 142 R 142 (231)
T ss_dssp E
T ss_pred E
Confidence 5
No 65
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.69 E-value=1.6e-16 Score=140.43 Aligned_cols=108 Identities=25% Similarity=0.400 Sum_probs=93.2
Q ss_pred CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEE
Q 013843 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (435)
Q Consensus 161 ~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~ 240 (435)
.+.++.++++++|+|. .|..+|.|+|| |+|++.||++||++ +.++.|++|.
T Consensus 104 ~~sGl~y~vl~~G~G~-~p~~gD~V~V~---------------------------Y~g~l~dG~vfdss-~~~g~p~~f~ 154 (213)
T 1fd9_A 104 LPSGLQYKVINSGNGV-KPGKSDTVTVE---------------------------YTGRLIDGTVFDST-EKTGKPATFQ 154 (213)
T ss_dssp CTTSCEEEEEECCCSC-CCCTTCEEEEE---------------------------EEEEETTSCEEEEH-HHHCSCEEEE
T ss_pred CCCccEEEEEecCCCc-cCCCCCEEEEE---------------------------EEEEECCCCEEeec-cccCCCEEEE
Confidence 4567888999999984 67788888765 55666688889988 6667899999
Q ss_pred cCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEEe
Q 013843 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (435)
Q Consensus 241 lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~~ 302 (435)
+ +.+++||+.+|.+|++||++.|.|||+++||+.+... .||++++++|+|+|+++.+
T Consensus 155 l--g~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~~~---~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 155 V--SQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGG---PIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp G--GGSCHHHHHHHTTCCTTCEEEEEECGGGTTTTCCCSS---SCCTTCCEEEEEEEEEEEC
T ss_pred c--CchhhHHHHHHcCCCCCCEEEEEECchhccCccCCCC---CCCCCCeEEEEEEEEEEEc
Confidence 9 4899999999999999999999999999999988653 6999999999999999874
No 66
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.8e-16 Score=124.39 Aligned_cols=86 Identities=34% Similarity=0.514 Sum_probs=76.4
Q ss_pred EEEEEEecCCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEE
Q 013843 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYY 293 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~ 293 (435)
+||++++.||++|+++ +.+++|++|.+|.+++++||+.+|.+|++||+..|.+|++++||..+... .||++++++|
T Consensus 14 v~y~~~~~dG~~~d~s-~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~---~Ip~~~~l~f 89 (102)
T 2pbc_A 14 MHYTGKLEDGTEFDSS-LPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPP---KIPGGATLVF 89 (102)
T ss_dssp EEEEEECTTSCEEEES-TTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEE
T ss_pred EEEEEEECCCCEEEeC-CCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCC---CcCcCCeEEE
Confidence 3556666688889988 66678999999999999999999999999999999999999999988754 6999999999
Q ss_pred EEEEEEEEec
Q 013843 294 EVEMMDFIKE 303 (435)
Q Consensus 294 ~iel~~~~~~ 303 (435)
+|+|+++.+.
T Consensus 90 ~v~l~~v~~~ 99 (102)
T 2pbc_A 90 EVELLKIERR 99 (102)
T ss_dssp EEEEEEEGGG
T ss_pred EEEEEEeccc
Confidence 9999998754
No 67
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.69 E-value=1.6e-16 Score=130.08 Aligned_cols=111 Identities=23% Similarity=0.333 Sum_probs=91.7
Q ss_pred CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEE
Q 013843 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (435)
Q Consensus 161 ~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~ 240 (435)
.+.++.++++++|.|. .+..++.|++|| ++++.||++||++ +.+++|++|.
T Consensus 10 ~~~Gl~~~~l~~G~G~-~~~~gd~V~v~Y---------------------------~g~~~dG~~fdss-~~~~~p~~f~ 60 (129)
T 1u79_A 10 SPSGLAFCDKVVGYGP-EAVKGQLIKAHY---------------------------VGKLENGKVFDSS-YNRGKPLTFR 60 (129)
T ss_dssp CTTSCEEEEEECCSSC-BCCTTCEEEEEE---------------------------EEECTTSCEEEEH-HHHTSCEEEE
T ss_pred CCCCeEEEEEEcCCCC-CCCCCCEEEEEE---------------------------EEEECCCCEEEec-CCCCCCEEEE
Confidence 3456888999999884 577788888755 4555577888887 5557899999
Q ss_pred cCCCCcchHHHHHHcc------cccCcEEEEEEcCCCCCCcccccc--ccccCCCCCeEEEEEEEEEE
Q 013843 241 TDEEQVIAGLDRVAAT------MKKEEWAIVTINHEYGFGNVEAKR--DLATIPSCAKLYYEVEMMDF 300 (435)
Q Consensus 241 lg~~~v~~g~~~~l~~------m~~Ge~~~i~~~~~~~yg~~~~~~--~~~~ip~~~~l~~~iel~~~ 300 (435)
+|.+++++||+.+|.+ |++||++.|.+||+++||+.+... .-..||++++++|+|+|+++
T Consensus 61 lG~~~~i~G~~~~L~G~~~~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 61 IGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TTSSSSCHHHHHHHHCBTTBCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred eCCCCccHHHHHHhcccccccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9999999999999988 999999999999999999987631 01259999999999999875
No 68
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.68 E-value=5.5e-16 Score=130.93 Aligned_cols=105 Identities=10% Similarity=0.070 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
.+.+..+...|..+++.|+|++|+..|++++.+.|.+. .+|+++|.||..+|+|++|+.+|++++
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~---------------~~~~~lg~~~~~~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNV---------------DYIMGLAAIYQIKEQFQQAADLYAVAF 97 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 34567899999999999999999999999999998764 669999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 395 ~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+++|+++.+|+++|.+|..+|++++|+.+|+++++++|++
T Consensus 98 ~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 98 ALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred hhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 9999999999999999999999999999999999999974
No 69
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.67 E-value=5.4e-16 Score=137.93 Aligned_cols=104 Identities=31% Similarity=0.556 Sum_probs=90.6
Q ss_pred CCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeeecCCCCeeEEEEEEEEEEEecCCcEEeecCCCCCCCeEEEc
Q 013843 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFIT 241 (435)
Q Consensus 162 dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~f~~~~~~~~~p~~~~l 241 (435)
+.++.++++++|.|. .|..+|.|+|| |++++.||++||++ +.++.|++|.+
T Consensus 120 ~sGl~y~vl~~G~G~-~p~~gD~V~V~---------------------------Y~g~l~dG~vfdss-~~~g~p~~f~l 170 (224)
T 1q6h_A 120 STGLVYQVVEAGKGE-APKDSDTVVVN---------------------------YKGTLIDGKEFDNS-YTRGEPLSFRL 170 (224)
T ss_dssp TTSCEEEEEECCSSC-CCCTTCEEEEE---------------------------EEEEETTSCEEEEG-GGGTSCEEEEG
T ss_pred CCceEEEEEecccCc-cccCCCEEEEE---------------------------EEEEeCCCCEEeec-cccCCCEEEEc
Confidence 456888899999985 67788887764 56666788899998 77789999999
Q ss_pred CCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEE
Q 013843 242 DEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (435)
Q Consensus 242 g~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~ 300 (435)
+.+++||+.+|.+|++||++.|.|||+++||..+.. .||++++++|+|+|+++
T Consensus 171 --g~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~~----~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 171 --DGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVP----GIPPNSTLVFDVELLDV 223 (224)
T ss_dssp --GGSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCBT----TBCTTCCEEEEEEEEEE
T ss_pred --CCcchhHHHHHcCCCCCCEEEEEECchhhcCcCCCC----CCCCCCEEEEEEEEEEe
Confidence 489999999999999999999999999999998865 39999999999999886
No 70
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.66 E-value=1.8e-16 Score=133.44 Aligned_cols=118 Identities=18% Similarity=0.234 Sum_probs=92.9
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCCCCCCCCCCCCCCCC
Q 013843 62 PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPPN 141 (435)
Q Consensus 62 ~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~~yg~~~~~~i~~~ 141 (435)
++.||.|+|||+++ .||++|++|+ +.|.+|.+++++||+++|.+|++|++++| .|||+.|||.++
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v--~ipp~~aYG~~~------- 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQA--HVPAEKAYGPHD------- 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEE--EECGGGTTCCCC-------
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEE--EECcHHHcCCCC-------
Confidence 67899999999999 8999999986 99999999999999999999999999999 999999999985
Q ss_pred CeEEEEEEEeeeeeeeccC---------CCCceEEEEEeccCCCCCCCCCCeEEEEEEEEeCCCceeee
Q 013843 142 SVVQFEVELVSWITVVDLS---------KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (435)
Q Consensus 142 ~~l~~~v~l~~~~~~~d~~---------~dg~~~k~ii~~G~g~~~~~~~~~V~v~~~~~~~~g~~v~~ 201 (435)
..+++.+.+..+.....+. .+|....-++.+ -+++.|++++||++++.++.|+
T Consensus 68 ~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~-------v~~~~v~vD~NHPLAGk~L~F~ 129 (158)
T 3cgm_A 68 PEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVA-------VEGEEVTVDFNHPLAGKDLDFQ 129 (158)
T ss_dssp GGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEE-------EETTEEEEECSCTTTTCCEEEE
T ss_pred cceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEE-------ECCCEEEEeCCccccCCEEEEE
Confidence 5567777665553211111 223222222222 1457999999999999998885
No 71
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1e-15 Score=124.48 Aligned_cols=101 Identities=27% Similarity=0.337 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+.+.|+.+++.|+|++|+..|++++++.|.+. .+++++|.||.++++|++|+.+|+++++
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA---------------RGYSNRAAALAKLMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999988753 6799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
++|+++.+|+++|.++..+|++++|+.+|+++++++
T Consensus 67 ~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999
No 72
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.66 E-value=2.2e-16 Score=125.57 Aligned_cols=84 Identities=24% Similarity=0.394 Sum_probs=74.7
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcC-CCCCCCCCCCCCC
Q 013843 60 DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLP-SELRFGVEGRDSL 138 (435)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip-~~~~yg~~~~~~i 138 (435)
..++.||.|+|||++++ ||++|++|. +.|+.|.+|.+++++||+++|.+|++|++++| .|| |+. ||..+.
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v--~i~fP~~-Yg~~~~--- 98 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTL--ALTFPSD-YHVKEL--- 98 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEE--CCCCCTT-SSSSGG---
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEE--EEeCchh-hCcCCC---
Confidence 68999999999999999 999999996 48999999999999999999999999999999 885 433 887652
Q ss_pred CCCCeEEEEEEEeee
Q 013843 139 PPNSVVQFEVELVSW 153 (435)
Q Consensus 139 ~~~~~l~~~v~l~~~ 153 (435)
++++++|+|+|+++
T Consensus 99 -~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 -QSKPVTFEVVLKAI 112 (113)
T ss_dssp -GSCCCEEEEEECCB
T ss_pred -CCCEEEEEEEEEEE
Confidence 67999999999876
No 73
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.63 E-value=3.2e-15 Score=127.65 Aligned_cols=106 Identities=24% Similarity=0.180 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+..+...|..++..|+|++|+..|++++++.|.+. .+++++|.||+++++|++|+.+|++++
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~al 72 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANP---------------IYLSNRAAAYSASGQHEKAAEDAELAT 72 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCH---------------HHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999988753 679999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 395 ~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
+++|++..+|+++|.+|..+|++++|+.+|+++++++|++.
T Consensus 73 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 73 VVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999999999999999999999874
No 74
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.61 E-value=7.1e-15 Score=123.67 Aligned_cols=105 Identities=18% Similarity=0.149 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
.....+...|..++..|+|++|+..|++++...|.+. .+++++|.||..+|+|++|+.+|++++.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDS---------------RFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 4567889999999999999999999999999988764 6689999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
++|+++.+++++|.+|..+|++++|+.+|+++++++|+++
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 123 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXP 123 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCG
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 9999999999999999999999999999999999999763
No 75
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.60 E-value=3.1e-15 Score=126.14 Aligned_cols=105 Identities=10% Similarity=-0.005 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
+....+...|..|++.|+|++|+..|++++++.|.+. .+|+++|.||.+++++++|+.+|+++++
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDP---------------KAHRFLGLLYELEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 4455678899999999999999999999999998764 6799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHH-HHHHHHhCCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELD-IKKAIEADPQNR 435 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~-~~~al~l~P~n~ 435 (435)
++|+++.+|+++|.+|..+|++++|... +++|++++|+|+
T Consensus 94 ~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 94 LNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 9999999999999999999999887765 699999999873
No 76
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.59 E-value=1.2e-14 Score=121.10 Aligned_cols=105 Identities=19% Similarity=0.183 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
.....+...|..+++.|+|++|+..|++++...|.+. .+++++|.||.++++|++|+.+|++++.
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDA---------------RYFLGLGACRQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 4567888999999999999999999999999988764 6699999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
++|+++.+++++|.+|..+|++++|+.+|+++++++|+++
T Consensus 81 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 120 (142)
T 2xcb_A 81 MDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQP 120 (142)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCG
T ss_pred cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999999999999999763
No 77
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.59 E-value=1.5e-14 Score=140.73 Aligned_cols=125 Identities=35% Similarity=0.516 Sum_probs=110.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCC-CCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHH
Q 013843 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDG-SFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIE 388 (435)
Q Consensus 310 ~~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~ 388 (435)
+.++.++.+..++..|+.+++.|+|++|+..|++|+++.+... ....++..........+|+|+|.||+++++|++|+.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 4778889999999999999999999999999999999765421 111223333556678899999999999999999999
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 389 LCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 389 ~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+|++||+++|+++++|+++|.+|..+|++++|+++|++|++++|+|
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999986
No 78
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.57 E-value=1.8e-14 Score=116.81 Aligned_cols=100 Identities=14% Similarity=0.065 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~ 399 (435)
.+...|..+++.|++++|+..|+++++..|.+. .+++++|.++..+|++++|+..|+++++++|+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPERE---------------EAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 467889999999999999999999999988764 66999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 400 ~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+..+++.+|.+|..+|++++|+..|+++++++|++
T Consensus 84 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 84 DIAVHAALAVSHTNEHNANAALASLRAWLLSQPQY 118 (121)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 99999999999999999999999999999999976
No 79
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.53 E-value=7e-14 Score=114.85 Aligned_cols=102 Identities=27% Similarity=0.372 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|.+++...|.+. .+++++|.|+..+++|++|+.++++++++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA---------------VYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcH---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 367889999999999999999999999999987653 66999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
+|+++.+++++|.++..+|++++|+..|+++++++|+
T Consensus 73 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 73 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 9999999999999999999999999999999999986
No 80
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.51 E-value=1.5e-13 Score=122.35 Aligned_cols=118 Identities=12% Similarity=0.026 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChH-HHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDD-EQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
.+..+...|..++..|+|++|+..|+++++..|.+....-. ...........+++++|.+|.++|++++|+.+|+++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 35678899999999999999999999999998864311000 00000011122233499999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++|+++.+++++|.++..+|++++|+.+|+++++++|+|
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999987
No 81
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.50 E-value=3e-13 Score=107.18 Aligned_cols=103 Identities=23% Similarity=0.218 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|++++...|.+ ..+++++|.++..++++++|+..++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN---------------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 56788999999999999999999999999998765 356899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+|++..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN 105 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999986
No 82
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.50 E-value=4.9e-13 Score=113.14 Aligned_cols=109 Identities=24% Similarity=0.357 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHH
Q 013843 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELC 390 (435)
Q Consensus 311 ~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~ 390 (435)
.....+.+..+...|..++..|+|++|+..|.+++...|.+ ..+++++|.++..+++|++|+.++
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCCHHHHHHHH
Confidence 35677889999999999999999999999999999998765 366999999999999999999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 391 SKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 391 ~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.++++++|.++.+++++|.++..+|++++|+.+|+++++++|++
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHD 114 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999976
No 83
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.49 E-value=2.8e-14 Score=120.20 Aligned_cols=96 Identities=14% Similarity=0.048 Sum_probs=87.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHH
Q 013843 324 EGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKA 403 (435)
Q Consensus 324 ~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a 403 (435)
+|..+..+|++++|+..|++++...|... ..++++|.+|+++++|++|+.+++++++++|+++.+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~---------------~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a 67 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKS---------------IKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA 67 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHH---------------TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 57777888999999999999999887654 348999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 404 LYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 404 ~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|+.+|.+|..+|++++|+.+|+++++++|++
T Consensus 68 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 98 (150)
T 4ga2_A 68 HRFLGLLYELEENTDKAVECYRRSVELNPTQ 98 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999987
No 84
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.47 E-value=3.1e-13 Score=142.04 Aligned_cols=119 Identities=18% Similarity=0.168 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCC------------ChHH-H---H---HHHHHHHHHHhHHHHH
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF------------VDDE-Q---K---LVKSLRVSCWLNSAAC 376 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~------------~~~~-~---~---~~~~~~~~~~~nla~~ 376 (435)
+.+..+.++|+.+.+.|+|++|+..|++||++.|..... ..++ . + ++......+|+|+|.+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 456677777777777777777777777777776654210 0000 0 0 0000112445555555
Q ss_pred HHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 377 CLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 377 ~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|.++|++++|+.+|++|++++|+++.+|+++|.+|..+|++++|++.|++|++++|++
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~ 144 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDF 144 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 5555555555555555555555555555555555555555555555555555555554
No 85
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=4.5e-13 Score=111.08 Aligned_cols=106 Identities=37% Similarity=0.507 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|+++++..|.+ .....+++++|.+|..+++|++|+.+|++++++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP------------QDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc------------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 46788999999999999999999999999987642 123577999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+|++..+++++|.++..+|++++|+.+|+++++++|++
T Consensus 95 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 95 DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSC
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999986
No 86
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.47 E-value=3.6e-13 Score=109.40 Aligned_cols=104 Identities=29% Similarity=0.384 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
.....+...|..++..|+|++|+..|+++++..|.+ ..+++++|.+|..++++++|+.+++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------------AKLYSNRAACYTKLLEFQLALKDCEECIQ 78 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 356789999999999999999999999999987754 36699999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++|.+..+++++|.++..+|++++|+..|+++++++|++
T Consensus 79 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~ 117 (133)
T 2lni_A 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSC 117 (133)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred hCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999975
No 87
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.47 E-value=1.3e-12 Score=105.43 Aligned_cols=108 Identities=31% Similarity=0.357 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHH
Q 013843 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCS 391 (435)
Q Consensus 312 ~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 391 (435)
......+..+...|..++..|+|++|+..|++++...|.+ ..++.++|.++..++++++|+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~ 70 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---------------AVYFCNRAAAYSKLGNYAGAVQDCE 70 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhhchHHHHHHHH
Confidence 3456678899999999999999999999999999987754 3568999999999999999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 392 KVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 392 ~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++++.+|++..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 71 RAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999999999999999999999999976
No 88
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.46 E-value=1e-12 Score=106.60 Aligned_cols=104 Identities=11% Similarity=0.044 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p 398 (435)
..+...|..++..|+|++|+..|+++++..|.+.. ...+++++|.|+.++|+|++|+.+++++++.+|
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~------------~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p 70 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVY------------TPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 70 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCC
Confidence 34678899999999999999999999999886542 235689999999999999999999999999999
Q ss_pred CC---HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 399 HN---VKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 399 ~~---~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++ +.+++.+|.++..+|++++|+..|+++++..|++
T Consensus 71 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 71 THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 99 8999999999999999999999999999999986
No 89
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.46 E-value=2.6e-13 Score=126.76 Aligned_cols=102 Identities=27% Similarity=0.370 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..++..|+.+++.|+|++|+..|++++...|.+. .+++++|.||.++++|++|+.+|+++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA---------------VYYTNRALCYLKMQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999999988653 669999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|++..+++++|.+|..+|++++|+..|+++++++|++
T Consensus 69 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 69 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999875
No 90
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.45 E-value=1.5e-13 Score=115.17 Aligned_cols=90 Identities=20% Similarity=0.233 Sum_probs=82.9
Q ss_pred HcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCH----------HHHHHHHHHHHhhCCC
Q 013843 330 KNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDY----------QGAIELCSKVLDCDCH 399 (435)
Q Consensus 330 ~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~----------~~A~~~~~~al~~~p~ 399 (435)
+.+.|++|+..|++++++.|.+. .+|+|+|.++..++++ ++|+..|++||+++|+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~a---------------ea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~ 78 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDA---------------DNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHhHHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC
Confidence 45678999999999999999864 6699999999999875 5999999999999999
Q ss_pred CHHHHHHHHHHHHhcc-----------cHHHHHHHHHHHHHhCCCC
Q 013843 400 NVKALYRRAQAYMEIA-----------DLILAELDIKKAIEADPQN 434 (435)
Q Consensus 400 ~~~a~~~~a~~~~~lg-----------~~~eA~~~~~~al~l~P~n 434 (435)
+..+|+++|.+|..+| ++++|+++|++|++++|+|
T Consensus 79 ~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 79 KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 9999999999999885 8999999999999999986
No 91
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.43 E-value=1.4e-12 Score=117.21 Aligned_cols=101 Identities=21% Similarity=0.286 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhc-cCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVS-EDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~-~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
..+...|..++..|+|++|+..|++++++.| .+ ..+++++|.|+..+++|++|+.+|+++++++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQD---------------SVTAYNCGVCADNIKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCC---------------cHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC
Confidence 6789999999999999999999999999987 43 2568889999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|++..+++.+|.+|..+|++++|+..|+++++++|++
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 9999999999999999999999999999999999986
No 92
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.43 E-value=9e-13 Score=114.14 Aligned_cols=68 Identities=18% Similarity=0.097 Sum_probs=65.1
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
..++.++|.+|.++|+|++|+.+|+++++++|.++.+|+++|.+|..+|++++|+++|++|++++|+|
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 107 ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHH
T ss_pred hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccC
Confidence 35688999999999999999999999999999999999999999999999999999999999999965
No 93
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.42 E-value=1.1e-12 Score=137.96 Aligned_cols=99 Identities=16% Similarity=0.047 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~ 399 (435)
.+.++|+.+...|+|++|+..|++|+++.|.+ ..+|+|+|.+|.++|++++|+.+|++||+++|+
T Consensus 79 a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~---------------~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~ 143 (723)
T 4gyw_A 79 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAF---------------ADAHSNLASIHKDSGNIPEAIASYRTALKLKPD 143 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 44444555555555555555555555544432 467999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 400 ~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
++.+++++|.+|..++++++|.+.|++++++.|+
T Consensus 144 ~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 144 FPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAD 177 (723)
T ss_dssp CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred ChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChh
Confidence 9999999999999999999999999999998764
No 94
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.42 E-value=9.2e-13 Score=103.37 Aligned_cols=101 Identities=21% Similarity=0.278 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~ 399 (435)
.+...|..++..|+|++|+..|+++++..|.+. .+++++|.++..+++|++|+.+++++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEES---------------KYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 456788999999999999999999999987643 56899999999999999999999999999999
Q ss_pred --CHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHhCCCCC
Q 013843 400 --NVKALYRRAQAYMEI-ADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 400 --~~~a~~~~a~~~~~l-g~~~eA~~~~~~al~l~P~n~ 435 (435)
+..+++.+|.++..+ |++++|+++|++++...|+++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 73 EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999999999999999 999999999999999999863
No 95
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.41 E-value=2.1e-13 Score=109.50 Aligned_cols=90 Identities=14% Similarity=0.080 Sum_probs=80.1
Q ss_pred HcCCHHHHHHHHHHHHHH---hccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHH
Q 013843 330 KNGKYERAGKKYNKAADC---VSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYR 406 (435)
Q Consensus 330 ~~g~y~~A~~~y~~al~~---~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 406 (435)
..|+|++|+..|++++++ .|. ...+++++|.+|..+|+|++|+.+++++++++|+++.++++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~---------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 66 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD---------------LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVF 66 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH---------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHH
Confidence 468999999999999998 443 24779999999999999999999999999999999999999
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 407 RAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 407 ~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+|.++..+|++++|+..|+++++++|++
T Consensus 67 l~~~~~~~g~~~~A~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 67 YAMVLYNLGRYEQGVELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999999999986
No 96
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.41 E-value=1.6e-12 Score=116.44 Aligned_cols=102 Identities=20% Similarity=0.164 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..+++.|+|++|+..|+++++..|.+. .+++++|.++.++|++++|+..++++++++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~~~ 69 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQDP---------------EALYWLARTQLKLGLVNPALENGKTLVART 69 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999999988764 669999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc-----------ccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEI-----------ADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~l-----------g~~~eA~~~~~~al~l~P~n 434 (435)
|+++.+++.+|.++..+ |++++|+..|+++++++|++
T Consensus 70 P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~ 117 (217)
T 2pl2_A 70 PRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRY 117 (217)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999 99999999999999999986
No 97
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.41 E-value=6.5e-13 Score=112.41 Aligned_cols=64 Identities=20% Similarity=0.365 Sum_probs=57.4
Q ss_pred EEEEEEecCCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCcccc
Q 013843 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~ 278 (435)
+||++++.||++||++ +..++|++|.+|.+++++||+.+|.+|++||+..|.|||+++||+.+.
T Consensus 33 v~Y~g~l~dG~vfDss-~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~ 96 (169)
T 4dt4_A 33 VHFTLKLDDGTTAEST-RNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSP 96 (169)
T ss_dssp EEEEEEETTSCEEEEH-HHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEEECCCCEEEec-CCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCCh
Confidence 4667777788999988 666789999999999999999999999999999999999999998654
No 98
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.40 E-value=2.5e-12 Score=103.83 Aligned_cols=103 Identities=26% Similarity=0.340 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
+.+..+...|..++..|+|++|+..|.+++...|.+ ..+++++|.+|..+++|++|+.++.+++.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 66 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---------------MTYITNQAAVYFEKGDYNKCRELCEKAIE 66 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 356788999999999999999999999999997754 36689999999999999999999999999
Q ss_pred hCCCC-------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 396 CDCHN-------VKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 396 ~~p~~-------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
+.|.+ ..+++++|.++..+|++++|+.+|+++++++|+
T Consensus 67 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 98877 899999999999999999999999999999884
No 99
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.37 E-value=1.5e-12 Score=109.07 Aligned_cols=64 Identities=28% Similarity=0.457 Sum_probs=56.2
Q ss_pred EEEEEEecCCcEEeecCCCC-------------CCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccc
Q 013843 214 VSYIARLEDGTVFEKKGYDG-------------EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAK 279 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~-------------~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~ 279 (435)
++|++++ ||++||++ +.. ++|++|.+|.+++++||+.+|.+|++||+..|.|||+++||+.+..
T Consensus 10 v~Y~g~l-dG~vfDss-~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aYG~~~~~ 86 (157)
T 3pr9_A 10 ISYDGYV-DGKLFDTT-NEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDPS 86 (157)
T ss_dssp EEEEEEE-TTEEEEES-CHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTTCCCCGG
T ss_pred EEEEEEE-CCEEEEec-cccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhcCCCChH
Confidence 5777888 88888887 432 3799999999999999999999999999999999999999987644
No 100
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.37 E-value=2.3e-12 Score=125.63 Aligned_cols=102 Identities=13% Similarity=0.062 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccC-HHHHHHHHHHHHh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD-YQGAIELCSKVLD 395 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~-~~~A~~~~~~al~ 395 (435)
.+..+...|..+.+.|+|++|+..|+++|.+.|.+. .+|+++|.++..+++ +++|+.+|+++|+
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~---------------~a~~~~g~~l~~~g~d~~eAl~~~~~al~ 160 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANY---------------TVWHFRRVLLKSLQKDLHEEMNYITAIIE 160 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCH---------------HHHHHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 344555556666666666666666666666655432 334444444444443 4444444444444
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
++|++..+|+++|.++..+|++++|+.+|++|++++|+
T Consensus 161 l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~ 198 (382)
T 2h6f_A 161 EQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK 198 (382)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT
T ss_pred HCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 44444444444444444444444444444444444444
No 101
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.37 E-value=1.4e-12 Score=127.07 Aligned_cols=102 Identities=15% Similarity=0.071 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 318 AGRKKEEGNLLFKNGK-YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~-y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
...+..+|..+...|+ |++|+..|+++|++.|.+. .+|+++|.++..+|++++|+.+|++||++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~---------------~a~~~~g~~~~~~g~~~eAl~~~~kal~l 195 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY---------------QVWHHRRVLVEWLRDPSQELEFIADILNQ 195 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 5578889999999997 9999999999999988764 66899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+|++..+|+++|.++..+|++++|+++|+++++++|+|
T Consensus 196 dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 196 DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999976
No 102
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.36 E-value=1.5e-11 Score=98.13 Aligned_cols=102 Identities=33% Similarity=0.448 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..++..|+|++|+..|.+++...|.+ ..+++++|.++...+++++|+..++++++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 5678889999999999999999999999987654 2568899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 74 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 110 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999999999999999999976
No 103
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.36 E-value=5.8e-12 Score=111.90 Aligned_cols=97 Identities=19% Similarity=0.161 Sum_probs=87.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHH
Q 013843 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVK 402 (435)
Q Consensus 323 ~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~ 402 (435)
+.|..+++.|+|++|+..|++++++.|.+. .+++++|.+|..+|++++|+.+|+++++++|+++.
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~ 123 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKAPNNV---------------DCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA 123 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 399999999999999999999999998764 66999999999999999999999999999999998
Q ss_pred HHHHHHHHHHh-----------------------------------cccHHHHHHHHHHHHHhCCCC
Q 013843 403 ALYRRAQAYME-----------------------------------IADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 403 a~~~~a~~~~~-----------------------------------lg~~~eA~~~~~~al~l~P~n 434 (435)
+|+++|.+|+. +|+|++|+.+|++|++++|++
T Consensus 124 a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 124 ANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 88888877643 346889999999999999973
No 104
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.35 E-value=1e-11 Score=107.39 Aligned_cols=118 Identities=13% Similarity=0.186 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCC------------hHH-HH------HHHHHHHHHHhHHHHHH
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFV------------DDE-QK------LVKSLRVSCWLNSAACC 377 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~------------~~~-~~------~~~~~~~~~~~nla~~~ 377 (435)
.+..+.+.|+.+++.|+|++|+..|++++++.|.+.... .++ .. ........++.++|.++
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN 83 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 356788999999999999999999999999988654210 000 00 01111234567777778
Q ss_pred HHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 378 LKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 378 ~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
...++++.|+..+.++++++|.+..+++.+|.++..+|++++|++.|+++++++|++
T Consensus 84 ~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~ 140 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGF 140 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchh
Confidence 888888888888888888888888888999999999999999999999999999876
No 105
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.34 E-value=1.3e-11 Score=106.11 Aligned_cols=102 Identities=15% Similarity=0.124 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHH-HHHccCH--HHHHHHHHHHH
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAAC-CLKLKDY--QGAIELCSKVL 394 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~-~~~~~~~--~~A~~~~~~al 394 (435)
...+...|..++..|+|++|+..|++++.+.|.+. .+++++|.+ +...+++ ++|+..+++++
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~l~~~~~~~~~~~A~~~~~~al 108 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENA---------------ELYAALATVLYYQASQHMTAQTRAMIDKAL 108 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCH---------------HHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH---------------HHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 46788999999999999999999999999998753 568999999 8899999 99999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 395 ~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+++|++..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 109 ~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 109 ALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred HhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC
Confidence 9999999999999999999999999999999999999986
No 106
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.34 E-value=1e-11 Score=111.10 Aligned_cols=116 Identities=14% Similarity=-0.008 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCC---------h-----------HHHH-H---------HHHHHH
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFV---------D-----------DEQK-L---------VKSLRV 367 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~---------~-----------~~~~-~---------~~~~~~ 367 (435)
+..+...|..+++.|++++|+..|++++++.|.+.... . .+.. . +.....
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 45688899999999999999999999999988753210 0 0000 0 000112
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+++++|.++..+|++++|+..|+++++++ +++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 334555555555555555555555555555 555555555555555555555555555555555543
No 107
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.33 E-value=1.1e-11 Score=109.69 Aligned_cols=102 Identities=15% Similarity=0.081 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..++..|+|++|+..|++++.+.|.. ..+++++|.+|..+++|++|+.++++++++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL---------------AVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------hHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 3577888888888888888888888888887654 3568888999999999999999999999888
Q ss_pred CCCH----------------HHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNV----------------KALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~----------------~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|.+. .+++++|.++..+|++++|+.+|+++++++|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 102 RGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp TTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred CCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 7766 888999999999999999999999999888864
No 108
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.33 E-value=1.6e-12 Score=130.70 Aligned_cols=105 Identities=24% Similarity=0.348 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
+.+..+..+|+.+++.|+|++|+..|++|+++.|.+ ..+++++|.+|.++++|++|+.+|++|++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDATRAIE 68 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456778889999999999999999999999998765 36799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
++|+++.+++++|.+|..+|++++|+++|++|++++|++.
T Consensus 69 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 69 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp SCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999863
No 109
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.30 E-value=1.8e-11 Score=109.89 Aligned_cols=110 Identities=12% Similarity=0.068 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
....+...|..++..|+|++|+..|++++++.|.+. ........+++++|.++..++++++|+.+|++++++
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 75 LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA--------TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH--------HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc
Confidence 355678889999999999999999999999887653 233445578999999999999999999999999999
Q ss_pred CCC--CHHHHHHHHHHHHhcccH---------------------------HHHHHHHHHHHHhCCCC
Q 013843 397 DCH--NVKALYRRAQAYMEIADL---------------------------ILAELDIKKAIEADPQN 434 (435)
Q Consensus 397 ~p~--~~~a~~~~a~~~~~lg~~---------------------------~eA~~~~~~al~l~P~n 434 (435)
+|+ ++.+++++|.+|..+|+. ++|+.+|+++++++|+|
T Consensus 147 ~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 213 (228)
T 4i17_A 147 TSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNR 213 (228)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999 999999999999999998 99999999999999987
No 110
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.7e-12 Score=102.20 Aligned_cols=95 Identities=25% Similarity=0.419 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|++++++.|.+. .+++++|.||.++|+|++|+.+|++++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNP---------------VGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 467889999999999999999999999999988653 66999999999999999999999999999
Q ss_pred CCCC------HHHHHHHHHHHHhcccHHHHHHHHHH
Q 013843 397 DCHN------VKALYRRAQAYMEIADLILAELDIKK 426 (435)
Q Consensus 397 ~p~~------~~a~~~~a~~~~~lg~~~eA~~~~~~ 426 (435)
+|++ ..+++++|.++..+|++++|+..+++
T Consensus 68 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 68 TSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp CSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 9999 99999999999999999888876654
No 111
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.30 E-value=1.7e-11 Score=108.46 Aligned_cols=101 Identities=21% Similarity=0.194 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+...|..++..|+|++|+..|++++. + . ..+++++|.+|.++|+|++|+.+|+++++
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~--~-~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 65 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQD--P-H---------------SRICFNIGCMYTILKNMTEAEKAFTRSIN 65 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSSS--C-C---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHcC--C-C---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566788999999999999999999999852 1 1 35799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++|.++.+++++|.+|..+|++++|+.+|++++++.|++
T Consensus 66 ~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 66 RDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred hCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999876
No 112
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.28 E-value=5.1e-11 Score=109.29 Aligned_cols=104 Identities=20% Similarity=0.116 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+...|..++..|+|++|+..|+++++..|.+ ..++.++|.+|..+|++++|+.+++++++
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~al~ 105 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM---------------PEVFNYLGIYLTQAGNFDAAYEAFDSVLE 105 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 457788899999999999999999999999998764 35699999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++|.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 106 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 144 (275)
T 1xnf_A 106 LDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPND 144 (275)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999986
No 113
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.27 E-value=1.5e-11 Score=109.20 Aligned_cols=63 Identities=29% Similarity=0.463 Sum_probs=55.4
Q ss_pred EEEEEEecCCcEEeecCCCC-------------CCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCcccc
Q 013843 214 VSYIARLEDGTVFEKKGYDG-------------EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~-------------~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~ 278 (435)
+||++++ ||++||++ +.. +.|++|.+|.+++++||+.+|.+|++||+..|.|||++|||+.+.
T Consensus 10 v~Y~g~l-dG~vfDss-~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AYGe~~~ 85 (231)
T 3prb_A 10 ISYDGYV-DGKLFDTT-NEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDP 85 (231)
T ss_dssp EEEEEEE-TTEEEEES-CHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEEE-CCEEEEec-cchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 5777877 88888887 432 479999999999999999999999999999999999999998653
No 114
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.27 E-value=3.6e-11 Score=108.01 Aligned_cols=106 Identities=12% Similarity=0.089 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+.+.|..+++.|+|++|+..|++++...|.... ...+++++|.||+++|+|++|+..|+++++.+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPY------------SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH------------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 457888999999999999999999999999886542 24679999999999999999999999999999
Q ss_pred CCCHH---HHHHHHHHHHh------------------cccHHHHHHHHHHHHHhCCCCC
Q 013843 398 CHNVK---ALYRRAQAYME------------------IADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 398 p~~~~---a~~~~a~~~~~------------------lg~~~eA~~~~~~al~l~P~n~ 435 (435)
|++.. +++.+|.++.. +|++++|+..|+++++.+|+++
T Consensus 72 P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 72 PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 99875 89999999986 5799999999999999999863
No 115
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.27 E-value=3.4e-11 Score=110.54 Aligned_cols=107 Identities=18% Similarity=0.171 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..+++.|+|++|+..|+++++..|.+.. ...+++++|.||+++|+|++|+..|++++++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEW------------AADAQFYLARAYYQNKEYLLAASEYERFIQI 81 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcc------------hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 3678899999999999999999999999999887532 2467999999999999999999999999999
Q ss_pred CCCC---HHHHHHHHHHHHh--------cccHHHHHHHHHHHHHhCCCCC
Q 013843 397 DCHN---VKALYRRAQAYME--------IADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 397 ~p~~---~~a~~~~a~~~~~--------lg~~~eA~~~~~~al~l~P~n~ 435 (435)
.|++ ..+++.+|.++.. +|++++|+..|+++++++|++.
T Consensus 82 ~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 82 YQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp CTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred CCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 8855 6789999999999 9999999999999999999863
No 116
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.25 E-value=4.3e-11 Score=100.05 Aligned_cols=63 Identities=32% Similarity=0.590 Sum_probs=55.8
Q ss_pred EEEEEEec-CCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCcccc
Q 013843 214 VSYIARLE-DGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (435)
Q Consensus 214 v~y~~~~~-~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~ 278 (435)
+||++++. ||++||++ +. .+|++|.+|.+++++||+.+|.+|++||+..|.+||+.+||+.+.
T Consensus 15 v~Y~g~~~~dG~~fdss-~~-~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 15 IEYEVREQGSSIVLDSN-IS-KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp EEEEEEESSCSCEEEES-TT-TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred EEEEEEECCCCCEEEeC-CC-CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 46677776 88999988 43 579999999999999999999999999999999999999998754
No 117
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.25 E-value=1.1e-10 Score=99.41 Aligned_cols=62 Identities=19% Similarity=0.412 Sum_probs=55.6
Q ss_pred EEEEEEecCCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccc
Q 013843 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE 277 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~ 277 (435)
++|++++.||++||++ +. .+|++|.+|.+++++||+.+|.+|++||+..|.+||+.+||+.+
T Consensus 11 v~Y~g~~~dG~~fdss-~~-~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 11 LAYQVRTEDGVLVDES-PV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp EEEEEEETTSCEEEEC-CS-SSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred EEEEEEECCCCEEeec-cC-CcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 5677777789999988 43 47999999999999999999999999999999999999999874
No 118
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.24 E-value=6.6e-11 Score=107.19 Aligned_cols=100 Identities=27% Similarity=0.347 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
....+...|..++..|+|++|+..|+++++..|.+. .+++++|.+|.+++++++|+.+++++++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 202 (258)
T 3uq3_A 138 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA---------------RGYSNRAAALAKLMSFPEAIADCNKAIEK 202 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccH---------------HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 456788899999999999999999999999987643 66999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
+|+++.+++.+|.++..+|++++|+..|+++++++
T Consensus 203 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 203 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999
No 119
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.23 E-value=9.5e-11 Score=117.53 Aligned_cols=105 Identities=29% Similarity=0.340 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHH
Q 013843 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (435)
Q Consensus 314 ~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 393 (435)
+.+.+..+...|+.+++.|+|++|+..|++++...|+ ..+++++|.||.++|+|++|+.+|+++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED----------------PVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc----------------HHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 4678899999999999999999999999999999862 266999999999999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 394 LDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 394 l~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++++|++..+++.+|.++..+|++++|+..|+++++++|.+
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999854
No 120
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.23 E-value=9.5e-11 Score=107.50 Aligned_cols=105 Identities=19% Similarity=0.170 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH--------ccCHHHHHHH
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK--------LKDYQGAIEL 389 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~--------~~~~~~A~~~ 389 (435)
...+...|..+++.|+|++|+..|+++++..|.+.. ...+++++|.|+++ ++++++|+..
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~ 119 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR------------VPQAEYERAMCYYKLSPPYELDQTDTRKAIEA 119 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT------------HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch------------hHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 567889999999999999999999999999886643 24679999999999 9999999999
Q ss_pred HHHHHhhCCCCHHHH-----------------HHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 390 CSKVLDCDCHNVKAL-----------------YRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 390 ~~~al~~~p~~~~a~-----------------~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++++++.+|++..+. +.+|.+|..+|++++|+..|+++++..|++
T Consensus 120 ~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 120 FQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp HHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 999999999987666 899999999999999999999999999975
No 121
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.22 E-value=4.9e-12 Score=106.52 Aligned_cols=69 Identities=13% Similarity=-0.069 Sum_probs=66.5
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
..+++++|.+++++|+|++|+..|+++++++|+++.+|+.+|.+|..+|+|++|+.+|+++++++|+++
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~ 104 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDY 104 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc
Confidence 466999999999999999999999999999999999999999999999999999999999999999874
No 122
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.22 E-value=1.8e-10 Score=92.74 Aligned_cols=101 Identities=31% Similarity=0.419 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p 398 (435)
..+...|..++..|++++|+..|++++...|.. ..+++++|.++...+++++|+..++++++..|
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc---------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 345667888888888888888888888876543 25588899999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 399 HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 399 ~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+..+++.+|.++..+|++++|+..|++++.++|++
T Consensus 101 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 101 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999999874
No 123
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.21 E-value=3.4e-11 Score=118.40 Aligned_cols=90 Identities=21% Similarity=0.363 Sum_probs=81.0
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCCCCCCCCCCCCCC
Q 013843 60 DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLP 139 (435)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~~yg~~~~~~i~ 139 (435)
..++.||.|++||+++. ||+.|+++. +.|+.|.+|.+++++||+++|.||++|++++| .+|+..+||..+.
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v--~v~~~~~yg~~~l---- 226 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTI--DVTFPEEYHAENL---- 226 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEE--EEECCTTCSCTTT----
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEE--EECCchhhCCCCC----
Confidence 57899999999999995 999999987 48999999999999999999999999999999 8999999997753
Q ss_pred CCCeEEEEEEEeeeeeeec
Q 013843 140 PNSVVQFEVELVSWITVVD 158 (435)
Q Consensus 140 ~~~~l~~~v~l~~~~~~~d 158 (435)
++.+++|+|+|..+....-
T Consensus 227 ag~~~~F~V~v~~v~~~~l 245 (432)
T 1w26_A 227 KGKAAKFAINLKKVEEREL 245 (432)
T ss_dssp SSCEEEEEEECCEECCEEC
T ss_pred CCceEEEEEEEEEEeccCC
Confidence 6789999999999875443
No 124
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.20 E-value=1.9e-10 Score=92.61 Aligned_cols=101 Identities=31% Similarity=0.419 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p 398 (435)
..+...|..++..|++++|+..|+++++..|.+ ..+++++|.++...+++++|+..+++++..+|
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 66 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 66 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc---------------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC
Confidence 456788999999999999999999999987653 25688999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 399 HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 399 ~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+..+++.+|.++..+|++++|+..|++++++.|++
T Consensus 67 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 67 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred CchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999875
No 125
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.20 E-value=5.8e-11 Score=120.05 Aligned_cols=112 Identities=23% Similarity=0.313 Sum_probs=99.6
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHH
Q 013843 307 WEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGA 386 (435)
Q Consensus 307 ~~~~~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A 386 (435)
..++..++...+..+...|+.+++.|+|++|+..|++++...|.+. .+++++|.||.++|+|++|
T Consensus 14 ~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~~~~~g~~~~A 78 (537)
T 3fp2_A 14 KGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEP---------------VFYSNISACYISTGDLEKV 78 (537)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHH
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCc---------------HHHHHHHHHHHHcCCHHHH
Confidence 4567788889999999999999999999999999999999988653 6799999999999999999
Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 387 IELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 387 ~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+..|+++++++|++..+++.+|.++..+|++++|+..|+ ++.++|++
T Consensus 79 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 79 IEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC-----
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCC
Confidence 999999999999999999999999999999999999995 88888764
No 126
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.20 E-value=2.8e-11 Score=95.96 Aligned_cols=74 Identities=14% Similarity=0.231 Sum_probs=61.4
Q ss_pred EEEEEEecCCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEc-CCCCCCccccccccccCCCCCeEE
Q 013843 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTIN-HEYGFGNVEAKRDLATIPSCAKLY 292 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~-~~~~yg~~~~~~~~~~ip~~~~l~ 292 (435)
++|++++ ||++||++ .++|++|.+|.+++++||+.+|.+|++||+..|.++ |.. ||..+. ++++++
T Consensus 38 v~Y~g~~-dG~~fdss---~~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~--------~g~~l~ 104 (113)
T 1hxv_A 38 IDFTGIV-DNKKLASA---SAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKEL--------QSKPVT 104 (113)
T ss_dssp EEEEEEE-TTEECSTT---CCSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGG--------GSCCCE
T ss_pred EEEEEEE-CCEEcccC---CccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCC--------CCCEEE
Confidence 4667777 88888887 268999999999999999999999999999999995 333 776542 457899
Q ss_pred EEEEEEEE
Q 013843 293 YEVEMMDF 300 (435)
Q Consensus 293 ~~iel~~~ 300 (435)
|+|+|+++
T Consensus 105 F~V~l~~V 112 (113)
T 1hxv_A 105 FEVVLKAI 112 (113)
T ss_dssp EEEEECCB
T ss_pred EEEEEEEE
Confidence 99998765
No 127
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.20 E-value=5.6e-11 Score=103.16 Aligned_cols=63 Identities=19% Similarity=0.406 Sum_probs=55.7
Q ss_pred EEEEEEecCCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCcccc
Q 013843 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~ 278 (435)
++|++++.||++||++ +. .+|++|.+|.+++++||+.+|.+|++||+..|.|||+.+||+.+.
T Consensus 11 v~Y~g~~~dG~~fdss-~~-~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 11 LAYQVRTEDGVLVDES-PV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp EEEEEEETTTEEEEEC-CT-TSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred EEEEEEECCCCEEEec-CC-CCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 4667777788899988 43 479999999999999999999999999999999999999997653
No 128
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.19 E-value=1.6e-10 Score=108.26 Aligned_cols=110 Identities=17% Similarity=0.083 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHc-cCHHHHHHHHHHHH
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL-KDYQGAIELCSKVL 394 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-~~~~~A~~~~~~al 394 (435)
..+..+.+.|+.+...|+|++|+..|++|+++.+..... ...+.++.++|.+|..+ |++++|+.+|++|+
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~---------~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al 145 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF---------RRGANFKFELGEILENDLHDYAKAIDCYELAG 145 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 346788899999999999999999999999998764322 22356799999999996 99999999999999
Q ss_pred hhCCCC------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 395 DCDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 395 ~~~p~~------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++.|.+ ..++.++|.++..+|++++|+.+|++++++.|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 146 EWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 998754 5789999999999999999999999999999875
No 129
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.19 E-value=8.6e-11 Score=120.60 Aligned_cols=102 Identities=8% Similarity=-0.079 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..++..|+|++|+..|++++++.|.+. .+++++|.+|..+|++++|+.+++++++++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 87 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHP---------------EAVARLGRVRWTQQRHAEAAVLLQQASDAA 87 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 46677888888888888888888888888876542 457777777777777777777777777777
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|++..+++++|.+|..+|++++|++.|+++++++|++
T Consensus 88 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 88 PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 7777777777777777777777777777777777765
No 130
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.19 E-value=2e-10 Score=98.18 Aligned_cols=101 Identities=19% Similarity=0.071 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p 398 (435)
..+...|..++..|++++|+..|++++...|.+ ..++.++|.++..++++++|+.+++++++.+|
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN---------------FNVRFRLGVALDNLGRFDEAIDSFKIALGLRP 141 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh---------------HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc
Confidence 344556666666677777777777766665543 24577888888888888888888888888888
Q ss_pred CCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 399 HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 399 ~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+..+++.+|.++..+|++++|+..++++++++|++
T Consensus 142 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 177 (186)
T 3as5_A 142 NEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGA 177 (186)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 888888888888888888888888888888888765
No 131
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.18 E-value=3.4e-10 Score=107.57 Aligned_cols=107 Identities=26% Similarity=0.301 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
........|..+++.|++++|+..|++++...|.+. .....++.++|.++.++|++++|+..++++++.
T Consensus 233 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 233 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVA-----------EYTVRSKERICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCch-----------HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 344456679999999999999999999999987643 234466889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 302 ~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~ 339 (359)
T 3ieg_A 302 EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNEND 339 (359)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999986
No 132
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.17 E-value=1.3e-10 Score=94.52 Aligned_cols=69 Identities=19% Similarity=0.130 Sum_probs=66.3
Q ss_pred HHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+..+.++|.+|++.|+|++|+.+|+++++++|.++.+|+++|.+|..+|++++|+.+|+++++++|++
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 80 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF 80 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh
Confidence 356789999999999999999999999999999999999999999999999999999999999999986
No 133
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.17 E-value=1.6e-10 Score=108.21 Aligned_cols=109 Identities=21% Similarity=0.291 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 317 AAGRKKEEGNLLFKN-GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~-g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
.+..+.+.|..+... |+|++|+..|++|+++.|..... .....++.++|.+|.++|+|++|+.+|+++++
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~---------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV---------ALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh---------HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 356788899999996 99999999999999998864321 12356799999999999999999999999999
Q ss_pred hCCCCHH-------HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 396 CDCHNVK-------ALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 396 ~~p~~~~-------a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+.|++.. +|+++|.++..+|++++|+.+|+++++++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 187 SSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp TTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 9987643 68999999999999999999999999999974
No 134
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.17 E-value=6.1e-11 Score=94.36 Aligned_cols=83 Identities=10% Similarity=0.011 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcc
Q 013843 336 RAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIA 415 (435)
Q Consensus 336 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg 415 (435)
.|+..|+++++..|.+. .+++++|.+|..+|+|++|+.+|+++++++|.+..+|+.+|.+|..+|
T Consensus 3 ~a~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 67 (115)
T 2kat_A 3 AITERLEAMLAQGTDNM---------------LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG 67 (115)
T ss_dssp CHHHHHHHHHTTTCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence 57899999999888653 669999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCC
Q 013843 416 DLILAELDIKKAIEADPQ 433 (435)
Q Consensus 416 ~~~eA~~~~~~al~l~P~ 433 (435)
++++|+..|+++++++|.
T Consensus 68 ~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 68 DRAGARQAWESGLAAAQS 85 (115)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccc
Confidence 999999999999999874
No 135
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.17 E-value=2.8e-11 Score=127.09 Aligned_cols=102 Identities=16% Similarity=0.015 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|+++++..|.+. .+++++|.+|.++|+|++|+.+|++|+++
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRW---------------RLVWYRAVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 356677777888888888888888888887777653 34556666666666666666666666666
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+|++..+|+++|.++..+|++++ +++|++|++++|++
T Consensus 497 ~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~ 533 (681)
T 2pzi_A 497 FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGV 533 (681)
T ss_dssp STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTC
T ss_pred CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCch
Confidence 66555555555555555555555 55555555555543
No 136
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.16 E-value=5e-11 Score=91.98 Aligned_cols=92 Identities=12% Similarity=0.057 Sum_probs=82.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHH-HHhHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 013843 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVS-CWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (435)
Q Consensus 321 ~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~nla~~~~~~~~~~~A~~~~~~al~~~p~ 399 (435)
..+.|..+++.|+|++|+..|+++++..|.+. . +++++|.||..++++++|+.+|+++++++|+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGK---------------DEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTH---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcH---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 35788999999999999999999999987653 4 7999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 400 ~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
+..++++ +.+.+|+..|++++.++|++.
T Consensus 68 ~~~~~~~--------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 68 SPALQAR--------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp STHHHHH--------HHHHHHHHHHCCTTHHHHCCS
T ss_pred cHHHHHH--------HHHHHHHHHHHHHhccCcccc
Confidence 9998865 788899999999999988763
No 137
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.16 E-value=4.8e-10 Score=95.80 Aligned_cols=102 Identities=17% Similarity=0.164 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|++++|+..|+++++..|.+ ..++.++|.++...+++++|+.+++++++.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 106 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDN---------------VKVATVLGLTYVQVQKYDLAVPLLIKVAEAN 106 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 4567788999999999999999999999887654 3568899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 107 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 107 PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999999999999999999875
No 138
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.16 E-value=2.7e-10 Score=103.05 Aligned_cols=102 Identities=25% Similarity=0.307 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+...|..++..|+|++|+..|+++++.. .+. .+++++|.+|..++++++|+.++.++++
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~---------------~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 66 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDI---------------TYLNNRAAAEYEKGEYETAISTLNDAVE 66 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCT---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-ccH---------------HHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999987 332 6699999999999999999999999999
Q ss_pred hCCCC-------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 396 CDCHN-------VKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 396 ~~p~~-------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
++|++ +.+++.+|.++..+|++++|+..|+++++++|+
T Consensus 67 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 67 QGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 99887 799999999999999999999999999998774
No 139
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.16 E-value=1.3e-10 Score=111.64 Aligned_cols=102 Identities=18% Similarity=0.231 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..+...|+|++|+..|+++++..|.+ ..+++++|.+|.++|++++|+.+|+++++++
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 277 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED---------------YSLWNRLGATLANGDRSEEAVEAYTRALEIQ 277 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 4567788999999999999999999999998765 3569999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|+++.+++.+|.+|..+|++++|+..|+++++++|++
T Consensus 278 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 278 PGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999863
No 140
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.15 E-value=8.9e-11 Score=95.59 Aligned_cols=69 Identities=19% Similarity=0.182 Sum_probs=65.6
Q ss_pred HHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+.++.|+|.++++.|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+++|+++++++|++
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc
Confidence 356688999999999999999999999999999999999999999999999999999999999998865
No 141
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.15 E-value=1.5e-10 Score=111.19 Aligned_cols=102 Identities=22% Similarity=0.132 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..+++.|+|++|+..|++++...|.+ ..+++++|.+|.++|++++|+..++++++++
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 129 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD---------------AEAWQFLGITQAENENEQAAIVALQRCLELQ 129 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 4457888999999999999999999999998765 3669999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|++..+++.+|.+|..+|++++|+..|+++++++|++
T Consensus 130 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 130 PNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKY 166 (365)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHH
T ss_pred CCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999998853
No 142
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.14 E-value=3.9e-11 Score=100.35 Aligned_cols=65 Identities=34% Similarity=0.593 Sum_probs=55.8
Q ss_pred EEEEEEecCCcEEeecCCC-------------CCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccc
Q 013843 214 VSYIARLEDGTVFEKKGYD-------------GEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAK 279 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~-------------~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~ 279 (435)
+||++++.||++||++ +. ..+|++|.+|.+++++||+.+|.+|++||+..|.+||+.+||+.+..
T Consensus 10 v~Y~g~~~dG~~fdss-~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aYG~~~~~ 87 (151)
T 1ix5_A 10 VDYIGKLESGDVFDTS-IEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNRNEM 87 (151)
T ss_dssp ECCEECCTTSCCCEES-CHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSSCSCCST
T ss_pred EEEEEEECCCCEEEec-chhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHCCCCCcc
Confidence 4666666678888887 42 34799999999999999999999999999999999999999987644
No 143
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.14 E-value=1.3e-10 Score=116.73 Aligned_cols=101 Identities=18% Similarity=0.057 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHc---------CCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHc--------c
Q 013843 319 GRKKEEGNLLFKN---------GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL--------K 381 (435)
Q Consensus 319 ~~~~~~g~~~~~~---------g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--------~ 381 (435)
..+...|..++.. |+|++|+..|++++++.|.+. .+++++|.+|..+ +
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~~~~~~~~~g 235 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG---------------RSWYILGNAYLSLYFNTGQNPK 235 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHHHHhhccccc
Confidence 5677888999999 999999999999999988753 6699999999999 9
Q ss_pred CHHHHHHHHHHHHhhCC---CCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 382 DYQGAIELCSKVLDCDC---HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 382 ~~~~A~~~~~~al~~~p---~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+|++|+.+|+++++++| .++.+|+++|.+|..+|++++|+++|+++++++|++
T Consensus 236 ~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 291 (474)
T 4abn_A 236 ISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW 291 (474)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999 999999999999999999999999999999999986
No 144
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.14 E-value=3.8e-10 Score=107.22 Aligned_cols=101 Identities=21% Similarity=0.268 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.++.+...|..++..|+|++|+..|++++...|.+. .+++++|.++..+|++++|+..+++++++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 66 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNY---------------IAYYRRATVFLAMGKSKAALPDLTKVIAL 66 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 357889999999999999999999999999987653 67999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
+|++..+++.+|.++..+|++++|+..|+++++++|
T Consensus 67 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 67 KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCC
T ss_pred CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999998
No 145
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.14 E-value=2.1e-10 Score=105.18 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~ 399 (435)
.+...|..++..|+|++|+..|++++. .+.+... ...++.++|.+|..++++++|+.+++++++++|.
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~-----------~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~ 106 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKA-----------KSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT 106 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTC-----------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhH-----------HHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc
Confidence 345556666666666666666666666 3332222 2345777888888888888888888888888888
Q ss_pred CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 400 ~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 107 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 141 (272)
T 3u4t_A 107 RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD 141 (272)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc
Confidence 88888888888888888888888888887777764
No 146
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.14 E-value=3e-10 Score=108.85 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..++..|+|++|+..|++++.+.|.+ ..+++++|.++.++|++++|+.+|+++++++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 281 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND---------------YLLWNKLGATLANGNQSEEAVAAYRRALELQ 281 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4567788999999999999999999999997764 3568999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|++..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 282 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 282 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999875
No 147
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.13 E-value=3.3e-10 Score=103.84 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p 398 (435)
..+...|..++..|+|++|+..|+++++..|.+.. +++++|.+|..+|+|++|+.+++++++ .|
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~---------------~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~ 67 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPY---------------IYNRRAVCYYELAKYDLAQKDIETYFS-KV 67 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCST---------------THHHHHHHHHHTTCHHHHHHHHHHHHT-TS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHH---------------HHHHHHHHHHHHhhHHHHHHHHHHHHh-cc
Confidence 45678899999999999999999999999987764 389999999999999999999999999 44
Q ss_pred CC----HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 399 HN----VKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 399 ~~----~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
.+ ..+|+.+|.++..+|++++|+..|+++++++|++.
T Consensus 68 ~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~ 108 (272)
T 3u4t_A 68 NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL 108 (272)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH
Confidence 44 45699999999999999999999999999999863
No 148
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.12 E-value=1.7e-10 Score=115.72 Aligned_cols=101 Identities=18% Similarity=0.090 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 318 AGRKKEEGNLLFKNGKY-ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
+..+...|..++..|+| ++|+..|++++++.|.+. .+++++|.+|.++|++++|+.+|++++++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELV---------------EAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 56788899999999999 999999999999988653 67999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---------ccHHHHHHHHHHHHHhCCCC
Q 013843 397 DCHNVKALYRRAQAYMEI---------ADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~l---------g~~~eA~~~~~~al~l~P~n 434 (435)
+|+ ..+++++|.++..+ |++++|++.|+++++++|++
T Consensus 167 ~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 212 (474)
T 4abn_A 167 CKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD 212 (474)
T ss_dssp CCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC
Confidence 998 79999999999999 99999999999999999986
No 149
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.12 E-value=4.1e-10 Score=101.17 Aligned_cols=99 Identities=18% Similarity=0.149 Sum_probs=66.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCC
Q 013843 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHN 400 (435)
Q Consensus 321 ~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~ 400 (435)
+...|..++..|++++|+..|++++...|.+ ..++.++|.++.++|++++|+..++++++.+|++
T Consensus 128 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 192 (243)
T 2q7f_A 128 FYMLGTVLVKLEQPKLALPYLQRAVELNEND---------------TEARFQFGMCLANEGMLDEALSQFAAVTEQDPGH 192 (243)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 3344455555555555555555555544332 2456777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 401 VKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 401 ~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 193 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~ 226 (243)
T 2q7f_A 193 ADAFYNAGVTYAYKENREKALEMLDKAIDIQPDH 226 (243)
T ss_dssp HHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHccCcch
Confidence 7777777777777777777777777777777765
No 150
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.12 E-value=1e-10 Score=122.74 Aligned_cols=100 Identities=14% Similarity=0.049 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p 398 (435)
..+...|..++..|+|++|+..|++++++.|.+. .+++++|.+|.++|+|++ +.+|++|++++|
T Consensus 468 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~---------------~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P 531 (681)
T 2pzi_A 468 RLVWYRAVAELLTGDYDSATKHFTEVLDTFPGEL---------------APKLALAATAELAGNTDE-HKFYQTVWSTND 531 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCS---------------HHHHHHHHHHHHHTCCCT-TCHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh---------------HHHHHHHHHHHHcCChHH-HHHHHHHHHhCC
Confidence 3567789999999999999999999999999875 569999999999999999 999999999999
Q ss_pred CCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 399 HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 399 ~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++..+|+++|.++..+|++++|+++|++|++++|++
T Consensus 532 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 567 (681)
T 2pzi_A 532 GVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHF 567 (681)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCccc
Confidence 999999999999999999999999999999999975
No 151
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.12 E-value=8.9e-10 Score=98.90 Aligned_cols=100 Identities=21% Similarity=0.217 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|++++|+..|+++++..|... .++.++|.++..++++++|+..++++++.+
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---------------~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 121 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSAA---------------TAYYGAGNVYVVKEMYKEAKDMFEKALRAG 121 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcch---------------HHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 34555566666666666666666666666554321 234444444444444444444444444444
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
|.+..+++.+|.++..+|++++|+..|+++++++|
T Consensus 122 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 156 (243)
T 2q7f_A 122 MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNE 156 (243)
T ss_dssp CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 44444444444444444444444444444444444
No 152
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.11 E-value=4.8e-10 Score=104.73 Aligned_cols=102 Identities=12% Similarity=0.010 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHH----------
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAI---------- 387 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~---------- 387 (435)
...+...|..++..|++++|+..|+++++..|.+. .+++++|.++..+|++++|+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~---------------~a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNG---------------EIGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCH---------------HHHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcch---------------hHHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 45688999999999999999999999999998764 45777777777777777665
Q ss_pred ------------------------HHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 388 ------------------------ELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 388 ------------------------~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
..++++++.+|+++.+++.+|.+|..+|++++|++.|.++++++|++
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 44556677899999999999999999999999999999999999975
No 153
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.11 E-value=5.4e-10 Score=105.03 Aligned_cols=111 Identities=19% Similarity=0.141 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|+|++|+..|+++++..+........ .....++.++|.+|.++|++++|+.+++++++++
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~------~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTV------DKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI 266 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTT------TTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccc------cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3567788999999999999999999999987542211000 0013568999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|++..+++.+|.++..+|++++|+.+|+++++++|++
T Consensus 267 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 303 (330)
T 3hym_B 267 PQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDD 303 (330)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCC
T ss_pred ccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCc
Confidence 9999999999999999999999999999999999986
No 154
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.11 E-value=7.2e-11 Score=98.93 Aligned_cols=82 Identities=10% Similarity=-0.004 Sum_probs=74.5
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHH
Q 013843 339 KKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLI 418 (435)
Q Consensus 339 ~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~ 418 (435)
..|++++.+.|.+ ..+++++|.+++..|+|++|+..+++++.++|.++.+|+.+|.++..+|+++
T Consensus 8 ~~~~~al~~~p~~---------------~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~ 72 (148)
T 2vgx_A 8 GTIAMLNEISSDT---------------LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYD 72 (148)
T ss_dssp CSHHHHTTCCHHH---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hhHHHHHcCCHhh---------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHH
Confidence 4567777776653 4668999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCC
Q 013843 419 LAELDIKKAIEADPQNR 435 (435)
Q Consensus 419 eA~~~~~~al~l~P~n~ 435 (435)
+|+.+|+++++++|++.
T Consensus 73 ~A~~~~~~al~l~p~~~ 89 (148)
T 2vgx_A 73 LAIHSYSYGAVMDIXEP 89 (148)
T ss_dssp HHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHHHhcCCCCc
Confidence 99999999999999874
No 155
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.11 E-value=8e-10 Score=109.08 Aligned_cols=106 Identities=26% Similarity=0.301 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
.......|..++..|+|++|+..|++++++.|.+. .....++.++|.++.++|++++|+.+|+++++++
T Consensus 257 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 325 (450)
T 2y4t_A 257 LNKLIESAEELIRDGRYTDATSKYESVMKTEPSIA-----------EYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME 325 (450)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcch-----------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 34445669999999999999999999999887643 2234679999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|+++.+|+.+|.++..+|++++|+.+|+++++++|++
T Consensus 326 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 326 PDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcch
Confidence 9999999999999999999999999999999999986
No 156
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.10 E-value=6e-10 Score=106.78 Aligned_cols=102 Identities=16% Similarity=0.091 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..++..|+|++|+..|+++++..|.+ ..+++++|.+|.++|++++|+.+++++++++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 128 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH---------------MEAWQYLGTTQAENEQELLAISALRRCLELK 128 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHCcCHHHHHHHHHHHHhcC
Confidence 3456788999999999999999999999987764 3668999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|++..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 129 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 165 (368)
T 1fch_A 129 PDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAY 165 (368)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCc
Confidence 9999999999999999999999999999999999975
No 157
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.10 E-value=4.3e-10 Score=94.41 Aligned_cols=58 Identities=17% Similarity=0.376 Sum_probs=52.8
Q ss_pred EEEEEEecCCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCcccc
Q 013843 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~ 278 (435)
++|+++ .||++||++ + ++|.+|.+++++||+.+|.+|++||+..|.+||+.+||+.+.
T Consensus 11 v~Y~g~-~dG~~fdss-~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~ 68 (158)
T 3cgm_A 11 IRYTLQ-VEGEVLDQG-E-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDP 68 (158)
T ss_dssp EEEEEE-ETTEEEEEE-E-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEE-ECCEEEEee-E-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCc
Confidence 577777 789999988 3 999999999999999999999999999999999999997754
No 158
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.10 E-value=6.1e-10 Score=109.93 Aligned_cols=105 Identities=20% Similarity=0.283 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+..+...|..+++.|+|++|+..|+++++..|.+ ..+++++|.+|..+|++++|+.++++++
T Consensus 23 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al 87 (450)
T 2y4t_A 23 MADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN---------------YIAYYRRATVFLAMGKSKAALPDLTKVI 87 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3567889999999999999999999999999987764 3679999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 395 ~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+++|++..+++.+|.+|..+|++++|+..|+++++++|++
T Consensus 88 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 88 QLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred hcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999999974
No 159
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.09 E-value=8.8e-10 Score=103.04 Aligned_cols=108 Identities=14% Similarity=0.125 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+...|..++..|+|++|+..|+++++........ ......+++|+|.+|.++++|++|+.+++++++
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc--------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345678999999999999999999999999876544221 234567899999999999999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHhcc-cHHHHHHHHHHHHHhC
Q 013843 396 CDCHN------VKALYRRAQAYMEIA-DLILAELDIKKAIEAD 431 (435)
Q Consensus 396 ~~p~~------~~a~~~~a~~~~~lg-~~~eA~~~~~~al~l~ 431 (435)
+.+.. ..+|+++|.++..+| .+++|+++|++|+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 225 ISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 86544 789999999999999 5799999999999864
No 160
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.09 E-value=1.1e-09 Score=82.46 Aligned_cols=84 Identities=29% Similarity=0.382 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|+++++..|.+. .+++++|.++.+++++++|+.++++++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA---------------EAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 456788899999999999999999999999877542 56889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcc
Q 013843 397 DCHNVKALYRRAQAYMEIA 415 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg 415 (435)
+|++..+++++|.++..+|
T Consensus 73 ~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CTTCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 9999999999999988764
No 161
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.09 E-value=6.5e-10 Score=95.62 Aligned_cols=100 Identities=15% Similarity=0.141 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHH--------------
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQG-------------- 385 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~-------------- 385 (435)
.+...|..++..|++++|+..|+++++..|.+. .+++++|.++..+|++++
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~---------------~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~ 72 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRG---------------DVKLAKADCLLETKQFELAQELLATIPLEYQD 72 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSH---------------HHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcH---------------HHHHHHHHHHHHCCCHHHHHHHHHHhhhccCC
Confidence 455667777777777777777777777776653 334444444444444443
Q ss_pred --------------------HHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 386 --------------------AIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 386 --------------------A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 73 NSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 3445555666678888888888888888888888888888888888753
No 162
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.08 E-value=1.6e-09 Score=95.76 Aligned_cols=67 Identities=16% Similarity=0.034 Sum_probs=40.0
Q ss_pred HHHhHHHHHHHHc-cCHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 368 SCWLNSAACCLKL-KDYQGAIELCSKVLD--CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 368 ~~~~nla~~~~~~-~~~~~A~~~~~~al~--~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.++.++|.++..+ +++++|+..++++++ .+|.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 77 EINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 3455566666666 666666666666666 444445666666666666666666666666666665543
No 163
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.08 E-value=1e-09 Score=98.46 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH------------------
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK------------------ 379 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~------------------ 379 (435)
...+...|..+++.|+|++|+..|+++++..|.+... ..+++++|.++.+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~------------~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 108 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI------------DYVMYMRGLTNMALDDSALQGFFGVDRSDRD 108 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH------------HHHHHHHHHHHHHHHC--------------C
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH------------HHHHHHHHHHHHhhhhhhhhhhhccchhhcC
Confidence 3578889999999999999999999999999876532 2457788888776
Q ss_pred ccCHHHHHHHHHHHHhhCCCCHHHH-----------------HHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 380 LKDYQGAIELCSKVLDCDCHNVKAL-----------------YRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 380 ~~~~~~A~~~~~~al~~~p~~~~a~-----------------~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++++++|+..++++++..|++..++ +.+|.+|..+|++++|+..|+++++..|++
T Consensus 109 ~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 109 PQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred cHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 6799999999999999999997654 678999999999999999999999999976
No 164
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.08 E-value=7.2e-10 Score=103.81 Aligned_cols=68 Identities=13% Similarity=0.102 Sum_probs=62.8
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHH-HHHHHHHHHHhCCCCC
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLIL-AELDIKKAIEADPQNR 435 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~e-A~~~~~~al~l~P~n~ 435 (435)
.+++++|.|+.++|+|++|+..++++++++|+++.+++++|.++..+|++++ |.++++++++++|+|+
T Consensus 201 ~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 201 LLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCh
Confidence 5688999999999999999999999999999999999999999999999976 5789999999999873
No 165
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.07 E-value=9.2e-11 Score=113.76 Aligned_cols=97 Identities=21% Similarity=0.442 Sum_probs=78.7
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCCCCCCCCCCCCCC
Q 013843 60 DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLP 139 (435)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~~yg~~~~~~i~ 139 (435)
..++.||.|+|||+++. ||+.|+++. +.|+.|.+|.|++++||+++|.||++|++++|++.+|. .||..+ .
T Consensus 159 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~--dy~~~~----l 229 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSI-DGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPE--DYHAEN----L 229 (392)
T ss_dssp CCCCTTCEEEEEEEEES-SSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCT--TCSCTT----T
T ss_pred CCCCCCCEEEEEEEEEE-CCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCcc--ccccCC----C
Confidence 57899999999999994 999999985 37899999999999999999999999999999444454 466543 2
Q ss_pred CCCeEEEEEEEeeeeeeeccCCCCce
Q 013843 140 PNSVVQFEVELVSWITVVDLSKDGGI 165 (435)
Q Consensus 140 ~~~~l~~~v~l~~~~~~~d~~~dg~~ 165 (435)
+|.++.|+|+|..+....-+.-|..+
T Consensus 230 aGk~~~F~V~v~~i~~~~lpeldDEf 255 (392)
T 1t11_A 230 KGKAAKFAIKVNKVEARELPELNDEF 255 (392)
T ss_dssp SSCEEEECCCEEEEEEEECCCCSTGG
T ss_pred CCCeEEEEEEEEEEEcCCCCCcCHHH
Confidence 68999999999998755444333333
No 166
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.06 E-value=1.6e-09 Score=95.71 Aligned_cols=103 Identities=17% Similarity=0.056 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 319 GRKKEEGNLLFKN-GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 319 ~~~~~~g~~~~~~-g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
..+...|..++.. |++++|+..|+++++ .+..+. ...+++++|.++.++|++++|+.++.++++.+
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~------------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 143 (225)
T 2vq2_A 77 EINNNYGWFLCGRLNRPAESMAYFDKALA-DPTYPT------------PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ 143 (225)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHT-STTCSC------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHc-CcCCcc------------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3556677778888 888888888888887 222221 24668899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC-CC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADP-QN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P-~n 434 (435)
|.+..+++.+|.++..+|++++|+..|+++++++| .+
T Consensus 144 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 181 (225)
T 2vq2_A 144 PQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQ 181 (225)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999988 54
No 167
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.06 E-value=7.6e-10 Score=107.32 Aligned_cols=117 Identities=15% Similarity=0.074 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCC-------------ChHHHHHHHH------HHHHHHhHHHHHHH
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF-------------VDDEQKLVKS------LRVSCWLNSAACCL 378 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~-------------~~~~~~~~~~------~~~~~~~nla~~~~ 378 (435)
+..+...|..+++.|++++|+..|++++++.|..... .++....... ....++.++|.++.
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 146 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLK 146 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 4567778888888888888888888888887654210 0000000000 01234566777777
Q ss_pred HccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 379 KLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 379 ~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+|++++|+..+.++++.+|++..+|+.+|.++..+|++++|+..|+++++++|++
T Consensus 147 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 202 (388)
T 1w3b_A 147 ALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNF 202 (388)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 77777777777777777777777777777777777777777777777777777764
No 168
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.06 E-value=3e-10 Score=88.20 Aligned_cols=67 Identities=18% Similarity=0.122 Sum_probs=64.0
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
..+++++|.+|+++|+|++|+.+++++++++|+++.+|+.+|.+|..+|++++|++.|++++++.|.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 4679999999999999999999999999999999999999999999999999999999999998764
No 169
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.06 E-value=1.4e-09 Score=98.45 Aligned_cols=67 Identities=16% Similarity=0.094 Sum_probs=44.0
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+++++|.++.++|++++|+.++.++++.+|.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 142 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 208 (252)
T 2ho1_A 142 RVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQN 208 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCc
Confidence 4456666666666666666666666666666666666666666666666666666666666666643
No 170
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.05 E-value=1.4e-09 Score=111.46 Aligned_cols=102 Identities=9% Similarity=-0.007 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|+|++|+..|++++++.|.+. .+++++|.+|.++|++++|+.+++++++++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 121 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHP---------------GIALWLGHALEDAGQAEAAAAAYTRAHQLL 121 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45678899999999999999999999999987653 569999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEI---ADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~l---g~~~eA~~~~~~al~l~P~n 434 (435)
|++..+++++|.++..+ |++++|++.|+++++++|++
T Consensus 122 p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 122 PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999 99999999999999999975
No 171
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.05 E-value=1.8e-09 Score=89.90 Aligned_cols=107 Identities=17% Similarity=0.102 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+..+...|..++..|+|++|+..|++++++.+.... ......++.++|.+|..++++++|+.++++++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC---------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 456677888888888888888888888888887764321 12334567777778888888888888888777
Q ss_pred hhCCCC------HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 395 DCDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 395 ~~~p~~------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
++.+.. ..+++++|.++..+|++++|+..+++++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 765432 566777777777777777777777777765
No 172
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.05 E-value=1.6e-09 Score=101.52 Aligned_cols=100 Identities=17% Similarity=0.095 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHH----HHHccCHHHHHHHHHHH
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAAC----CLKLKDYQGAIELCSKV 393 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~----~~~~~~~~~A~~~~~~a 393 (435)
...+...|..+.+.|++++|+..|+++++..|... ..+++.+ +...+++++|+..++++
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~-----------------~~~l~~a~~~l~~~~~~~~eA~~~~~~~ 192 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDAT-----------------LTQLATAWVSLAAGGEKLQDAYYIFQEM 192 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----------------HHHHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH-----------------HHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 45677788999999999999999999999876532 2334333 33458999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 394 LDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 394 l~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++.+|+++.+|+.+|.++..+|++++|++.|+++++++|+|
T Consensus 193 l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~ 233 (291)
T 3mkr_A 193 ADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGH 233 (291)
T ss_dssp HHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999987
No 173
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.05 E-value=1.3e-09 Score=105.72 Aligned_cols=67 Identities=19% Similarity=0.078 Sum_probs=43.3
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.++.++|.+|.++|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 238 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 304 (388)
T 1w3b_A 238 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTH 304 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc
Confidence 4456666666666666666666666666666666666666666666666666666666666666654
No 174
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.04 E-value=2.9e-09 Score=96.39 Aligned_cols=102 Identities=15% Similarity=0.025 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|++++|+..|+++++..|.+ ..++.++|.++..++++++|+..++++++.+
T Consensus 141 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 205 (252)
T 2ho1_A 141 SRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQ---------------PSVALEMADLLYKEREYVPARQYYDLFAQGG 205 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3456667777777777777777777777776543 3568999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|.+..+++.++.++..+|++++|++.++++++++|++
T Consensus 206 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~ 242 (252)
T 2ho1_A 206 GQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGS 242 (252)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred cCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999986
No 175
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.04 E-value=8.9e-10 Score=86.27 Aligned_cols=68 Identities=10% Similarity=0.107 Sum_probs=65.5
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
...++++|.+++.+|+|++|+..|+++++++|+++.+++++|.++..+|++++|+.+|+++++++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 45689999999999999999999999999999999999999999999999999999999999999986
No 176
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.03 E-value=2.3e-09 Score=100.60 Aligned_cols=103 Identities=14% Similarity=0.065 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
....+...|..++..|+|++|+..|+++++..|.+ ..++.++|.++..++++++|+.++++++++
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 84 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPER---------------EEAWRSLGLTQAENEKDGLAIIALNHARML 84 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 34567888999999999999999999999987764 356889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+|.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 85 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 122 (327)
T 3cv0_A 85 DPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQY 122 (327)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTT
T ss_pred CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999975
No 177
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.03 E-value=3.6e-09 Score=96.81 Aligned_cols=69 Identities=12% Similarity=-0.001 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|+|++|+..|++++++.|.+. .+++++|.+|.++|++++|+.+++++++++
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 141 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYN---------------YAHLNRGIALYYGGRDKLAQDDLLAFYQDD 141 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcccc---------------HHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 45678889999999999999999999999987654 568999999999999999999999999999
Q ss_pred CCCH
Q 013843 398 CHNV 401 (435)
Q Consensus 398 p~~~ 401 (435)
|++.
T Consensus 142 ~~~~ 145 (275)
T 1xnf_A 142 PNDP 145 (275)
T ss_dssp TTCH
T ss_pred CCCh
Confidence 8875
No 178
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.03 E-value=1.2e-10 Score=99.97 Aligned_cols=96 Identities=14% Similarity=0.131 Sum_probs=83.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHH
Q 013843 324 EGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKA 403 (435)
Q Consensus 324 ~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a 403 (435)
.+..++..|+|++|+..|++++...|.+. .+++++|.+|..+++|++|+.+++++++++|+++.+
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 80 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQNS---------------EQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAEL 80 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHH
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Confidence 34556788999999999999999987653 569999999999999999999999999999999999
Q ss_pred HHHHHHH-HHhcccH--HHHHHHHHHHHHhCCCC
Q 013843 404 LYRRAQA-YMEIADL--ILAELDIKKAIEADPQN 434 (435)
Q Consensus 404 ~~~~a~~-~~~lg~~--~eA~~~~~~al~l~P~n 434 (435)
++.+|.+ +...|++ ++|+..|+++++++|++
T Consensus 81 ~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 81 YAALATVLYYQASQHMTAQTRAMIDKALALDSNE 114 (177)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCc
Confidence 9999999 8899999 99999999999999986
No 179
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.03 E-value=1.3e-09 Score=102.67 Aligned_cols=107 Identities=14% Similarity=0.079 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+.+.|..+.. |+|++|+.+|++|+++.+.... ......++.++|.+|.++|+|++|+.+|++++++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER---------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45677788888877 8888888888888888765421 1234577999999999999999999999999998
Q ss_pred CCCC------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 397 DCHN------VKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 397 ~p~~------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.|.+ ..+++.+|.++..+|++++|+.+|++++ ++|+.
T Consensus 185 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 185 YKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 6654 3578899999999999999999999999 99864
No 180
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.03 E-value=2.3e-09 Score=100.56 Aligned_cols=101 Identities=21% Similarity=0.272 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|++++|+..|++++...|.+. .++.++|.++..+|++++|+..++++++.+
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 236 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDA---------------QLWNKLGATLANGNRPQEALDAYNRALDIN 236 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 45677789999999999999999999999977643 568999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
|++..+++.+|.++..+|++++|+..|+++++++|+
T Consensus 237 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 237 PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999987
No 181
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.02 E-value=3.5e-09 Score=89.02 Aligned_cols=98 Identities=12% Similarity=0.068 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|+|++|+..|.+++++.|.+ ..+++++|.++..+|++++|+.+++++++++
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 111 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---------------IKGYYRRAASNMALGKFRAALRDYETVVKVK 111 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 4567888999999999999999999999998764 3569999999999999999999999999999
Q ss_pred CCCHHHHHHH--HHHHHhcccHHHHHHHHHHHHHh
Q 013843 398 CHNVKALYRR--AQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 398 p~~~~a~~~~--a~~~~~lg~~~eA~~~~~~al~l 430 (435)
|.+..++..+ +..+..+|++++|++.+.++..+
T Consensus 112 p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 112 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 9999888554 45588999999999999988765
No 182
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.01 E-value=3.4e-09 Score=102.69 Aligned_cols=109 Identities=14% Similarity=-0.012 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+...|..+...|+|++|+..|.+|+++.+.... ......++.|+|.+|..+|++++|+.+++++++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN---------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 56778889999999999999999999999998765432 124567899999999999999999999999999
Q ss_pred -----hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 396 -----CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 396 -----~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
.+|....+++.+|.++..+|++++|+.++++++++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 251 VSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999999999998654
No 183
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.01 E-value=8.9e-10 Score=103.88 Aligned_cols=108 Identities=13% Similarity=0.056 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+.+.|..+...|+|++|+..|++|+++.+..... .....++.|+|.+|.. +++++|+.+|++|++
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~---------~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTP---------DTAAMALDRAGKLMEP-LDLSKAVHLYQQAAA 143 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCH---------HHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Confidence 345677788888888899999999999999887643321 2345779999999999 999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 396 CDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 396 ~~p~~------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
+.+.. ..++.++|.+|..+|+|++|+.+|++++++.|.
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 144 VFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 87654 578999999999999999999999999998764
No 184
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.00 E-value=4.4e-10 Score=93.09 Aligned_cols=69 Identities=6% Similarity=-0.068 Sum_probs=66.1
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
...++++|.++++.|+|++|+..|++++..+|+++.+|+.+|.++..+|++++|+.+|+++++++|+++
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 86 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEP 86 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc
Confidence 356889999999999999999999999999999999999999999999999999999999999999874
No 185
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.00 E-value=2.8e-09 Score=99.57 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|++|+++....... ......+++|+|.+|.++|+|++|+.++++++++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc--------ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999776543321 1223468999999999999999999999999988
Q ss_pred CCC------CHHHHHHHHHHHHhcccHHHH-HHHHHHHHHhC
Q 013843 397 DCH------NVKALYRRAQAYMEIADLILA-ELDIKKAIEAD 431 (435)
Q Consensus 397 ~p~------~~~a~~~~a~~~~~lg~~~eA-~~~~~~al~l~ 431 (435)
.+. ...+|+++|.+|..+|++++| ..+|++|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 643 278899999999999999999 88899998763
No 186
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.00 E-value=3.6e-09 Score=99.37 Aligned_cols=115 Identities=11% Similarity=-0.018 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCh------------HH-HHH------HHHHHHHHHhHHHHHHHHc
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD------------DE-QKL------VKSLRVSCWLNSAACCLKL 380 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~------------~~-~~~------~~~~~~~~~~nla~~~~~~ 380 (435)
.+...|..++..|+|++|+..|+++++..|....... ++ ... .......+++++|.++..+
T Consensus 24 ~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (330)
T 3hym_B 24 VVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMV 103 (330)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence 3455666666667777777777777766655443210 00 000 0001135678888888888
Q ss_pred c-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 381 K-DYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 381 ~-~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+ ++++|+.+++++++++|.+..+|+.+|.++..+|++++|+..|+++++++|++
T Consensus 104 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 158 (330)
T 3hym_B 104 GHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGC 158 (330)
T ss_dssp CSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC
T ss_pred hhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhcccc
Confidence 8 88888888888888888888888888888888888888888888888888865
No 187
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.00 E-value=3.5e-09 Score=102.67 Aligned_cols=109 Identities=15% Similarity=0.095 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHH
Q 013843 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (435)
Q Consensus 314 ~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 393 (435)
....+..+...|..+...|+|++|+..|++|+++.+.... ......+++|+|.+|..+|++++|+.++++|
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~a 250 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ---------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRA 250 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3445678889999999999999999999999999876532 2345678999999999999999999999999
Q ss_pred Hh-----hC-CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 394 LD-----CD-CHNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 394 l~-----~~-p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
++ .+ |....+++++|.++..+|++++|+.+|++++++.
T Consensus 251 l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 251 IAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 99 46 7789999999999999999999999999999884
No 188
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.99 E-value=3e-09 Score=80.00 Aligned_cols=68 Identities=35% Similarity=0.468 Sum_probs=65.5
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
..+++++|.++..+++|++|+.+++++++++|.+..+++.+|.++..+|++++|+.+|+++++++|++
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999986
No 189
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.99 E-value=2.5e-09 Score=86.23 Aligned_cols=68 Identities=19% Similarity=0.199 Sum_probs=65.6
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+..+.++|.++++.++|++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 71 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 71 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 45689999999999999999999999999999999999999999999999999999999999999986
No 190
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.98 E-value=6.8e-09 Score=86.27 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|++++.+.+.... ......++.++|.++..++++++|+.++++++++
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD---------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3567888999999999999999999999998875432 1334677999999999999999999999999987
Q ss_pred CCC------CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 397 DCH------NVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 397 ~p~------~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
.+. ...+++.+|.++..+|++++|++.+++++++...
T Consensus 119 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 119 AQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 432 2578999999999999999999999999988553
No 191
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.97 E-value=6e-09 Score=103.58 Aligned_cols=111 Identities=16% Similarity=0.094 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+..+|..++..|+|++|++.|++|+++.+...... .......+|.|+|.+|..+|+|++|+.++++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~------~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~ 124 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQ------AEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVC 124 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGG------CTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccc------cchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 45677899999999999999999999999865321100 000124668899999999999999999999998863
Q ss_pred --------CCCHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHhCCCC
Q 013843 398 --------CHNVKALYRRAQAYMEIA--DLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 --------p~~~~a~~~~a~~~~~lg--~~~eA~~~~~~al~l~P~n 434 (435)
+..+.++..+|.++..++ +|++|+++|++|++++|+|
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~ 171 (472)
T 4g1t_A 125 EKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKN 171 (472)
T ss_dssp HHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTC
T ss_pred HhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCC
Confidence 345788888888887654 7999999999999999986
No 192
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.96 E-value=2.7e-09 Score=82.03 Aligned_cols=66 Identities=21% Similarity=0.262 Sum_probs=63.3
Q ss_pred HhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 370 WLNSAACCLKLKDYQGAIELCSKVLDCDCHNVK-ALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 370 ~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~-a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
.+++|.++++.++|++|+..|+++++.+|+++. +++.+|.++..+|++++|+++|+++++++|++.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 468999999999999999999999999999999 999999999999999999999999999999873
No 193
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.93 E-value=4.4e-09 Score=84.62 Aligned_cols=65 Identities=18% Similarity=0.085 Sum_probs=63.6
Q ss_pred HhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 370 WLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 370 ~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++++|.++++.|++++|+..++++++.+|+++.+|+.+|.++..+|++++|+..|+++++++|++
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 78899999999999999999999999999999999999999999999999999999999999986
No 194
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.92 E-value=7.8e-09 Score=94.48 Aligned_cols=108 Identities=19% Similarity=0.094 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+...|..++..|+|++|+..|++++++........ ......++.++|.+|..++++++|+.++.++++
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 113 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 113 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4567788999999999999999999999999863221000 023467899999999999999999999999999
Q ss_pred h--------CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 396 C--------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 396 ~--------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
+ +|....+++++|.++..+|++++|+..|++++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 114 IREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 8 5777899999999999999999999999999998
No 195
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.92 E-value=1.1e-08 Score=104.76 Aligned_cols=107 Identities=20% Similarity=0.196 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~ 399 (435)
.+...|..+.+.|++++|+..|+++++..|......+ ....++.+++.+|.+.|++++|+..++++++++|+
T Consensus 477 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~--------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 548 (597)
T 2xpi_A 477 LLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK--------PWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTN 548 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG--------GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh--------hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 3445566666666666666666666666443111000 01467999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 400 ~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++.+|+.+|.+|..+|++++|++.|+++++++|+|
T Consensus 549 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~ 583 (597)
T 2xpi_A 549 DANVHTAIALVYLHKKIPGLAITHLHESLAISPNE 583 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999987
No 196
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.92 E-value=1.2e-08 Score=98.81 Aligned_cols=109 Identities=18% Similarity=0.099 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHH
Q 013843 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (435)
Q Consensus 314 ~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 393 (435)
....+..+...|..++..|+|++|+..|.+|+++.+..... ....+.+++++|.+|..+|+|++|+.++.+|
T Consensus 139 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 210 (383)
T 3ulq_A 139 RIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY--------NIRLLQCHSLFATNFLDLKQYEDAISHFQKA 210 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc--------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 34567888999999999999999999999999998765432 2334678999999999999999999999999
Q ss_pred HhhCCCC------HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 394 LDCDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 394 l~~~p~~------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
+++.+.. ..+++++|.+|..+|++++|+.+|++|+++
T Consensus 211 l~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 211 YSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAV 253 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9986543 368999999999999999999999999995
No 197
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.91 E-value=3.6e-09 Score=88.69 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=63.5
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCC-------CHH-----HHHHHHHHHHhcccHHHHHHHHHHHHHh----
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH-------NVK-----ALYRRAQAYMEIADLILAELDIKKAIEA---- 430 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-------~~~-----a~~~~a~~~~~lg~~~eA~~~~~~al~l---- 430 (435)
+..+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 455889999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ---CCCC
Q 013843 431 ---DPQN 434 (435)
Q Consensus 431 ---~P~n 434 (435)
+|++
T Consensus 91 ~e~~pd~ 97 (159)
T 2hr2_A 91 GELNQDE 97 (159)
T ss_dssp CCTTSTH
T ss_pred ccCCCch
Confidence 9975
No 198
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.91 E-value=7.3e-09 Score=104.50 Aligned_cols=102 Identities=13% Similarity=0.030 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|+|++|+..|+++++..|.+. .++.++|.++..+|++++|+..++++++.+
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 374 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENV---------------YPYIQLACLLYKQGKFTESEAFFNETKLKF 374 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCS---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34566778888888888888888888888776654 457788888888888888888888888888
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 375 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 411 (537)
T 3fp2_A 375 PTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQ 411 (537)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcc
Confidence 8888888888888888888888888888888877654
No 199
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.91 E-value=1.1e-09 Score=109.91 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..+++.|+|++|+..|++|+++.|.. ..+++++|.+|.+++++++|+.+++++++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---------------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---------------IKGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 5678889999999999999999999999998765 3679999999999999999999999999999
Q ss_pred CCCHHHHHHHHHH--HHhcccHHHHHHHHH-----------HHHHhCCCC
Q 013843 398 CHNVKALYRRAQA--YMEIADLILAELDIK-----------KAIEADPQN 434 (435)
Q Consensus 398 p~~~~a~~~~a~~--~~~lg~~~eA~~~~~-----------~al~l~P~n 434 (435)
|++..++..++.+ +..++++++|++.++ ++++++|+.
T Consensus 105 p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 105 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9999999999999 889999999999999 888777754
No 200
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.90 E-value=7.1e-09 Score=87.79 Aligned_cols=69 Identities=25% Similarity=0.235 Sum_probs=66.2
Q ss_pred HHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
....++++|.++++.++|++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 78 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY 78 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 356789999999999999999999999999999999999999999999999999999999999999986
No 201
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.90 E-value=7.9e-09 Score=103.44 Aligned_cols=107 Identities=14% Similarity=0.104 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH---ccCHHHHHHHHHHHHh
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK---LKDYQGAIELCSKVLD 395 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~---~~~~~~A~~~~~~al~ 395 (435)
..+...|..++..|++++|+..|++++...|....... ...+++++|.++.. +|++++|+..++++++
T Consensus 373 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~ 443 (514)
T 2gw1_A 373 EVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYV---------GIAPLVGKATLLTRNPTVENFIEATNLLEKASK 443 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSS---------CSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHH---------HHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 34566788888888888888888888888877643100 01368999999999 9999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++|++..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 444 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 482 (514)
T 2gw1_A 444 LDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTM 482 (514)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSH
T ss_pred hCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999975
No 202
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.90 E-value=4.9e-09 Score=97.90 Aligned_cols=107 Identities=16% Similarity=0.054 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh-
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC- 396 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~- 396 (435)
+..+...|..++..++|++|+..|++++.+....... ...+.+++++|.+|..+|+|++|+.+|++|++.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4455668999999999999999999999975543322 123567999999999999999999999999953
Q ss_pred ------CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 397 ------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 397 ------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
.+....+++++|.+|..+|+|++|+.++++|+++.+.
T Consensus 186 ~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 186 EALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 2233578999999999999999999999999998653
No 203
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.89 E-value=1.8e-08 Score=87.81 Aligned_cols=106 Identities=11% Similarity=0.092 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|++++.+...... ......++.++|.+|..+|++++|+.++.+++++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999998765432 1234567888999999999999999999998887
Q ss_pred ---CCC----CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 397 ---DCH----NVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 397 ---~p~----~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
.++ ...+++++|.++..+|++++|+..+++++++.
T Consensus 96 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 96 LASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 332 35678888999999999999999998888763
No 204
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.88 E-value=3.4e-08 Score=92.13 Aligned_cols=107 Identities=16% Similarity=0.035 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH--
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL-- 394 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al-- 394 (435)
.+..+...|..+...|+|++|+..|++++...+...... ....+++++|.+|..+++|++|+.+|++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~ 184 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY---------QNLYIENAIANIYAENGYLKKGIDLFEQILKQ 184 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTT---------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchH---------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344456677888888899999999999988765433221 135679999999999999999999999999
Q ss_pred -hhCCCCH----HHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 395 -DCDCHNV----KALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 395 -~~~p~~~----~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
+..|++. .+++++|.+|..+|+|++|+.+|++++++.+
T Consensus 185 ~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 185 LEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4556543 6999999999999999999999999998754
No 205
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.87 E-value=9.1e-09 Score=94.05 Aligned_cols=110 Identities=17% Similarity=0.074 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+..+...|..++..|+|++|+..|.+++.+........ ......++.++|.+|..+|++++|+.++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 154 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF-------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567888999999999999999999999999853211000 02246779999999999999999999999999
Q ss_pred hh--------CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 395 DC--------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 395 ~~--------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
++ +|....+++.+|.++..+|++++|+..|++++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 155 EIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 99 77778999999999999999999999999999874
No 206
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.87 E-value=1.8e-08 Score=100.84 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHH
Q 013843 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCS 391 (435)
Q Consensus 312 ~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 391 (435)
.+.++.+....+.+..+..+|+|++|+.+|+++|++........ +...+.++.|+|.+|..+|+|++|+.+|+
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 375 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-------NLYVLRLLSIASEVLSYLQAYEEASHYAR 375 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 45566777888888899999999999999999999875532221 12356789999999999999999999999
Q ss_pred HHHhh-----CCCC---HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 392 KVLDC-----DCHN---VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 392 ~al~~-----~p~~---~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
++|++ .|++ ...++++|.+|..+|+|++|+..|++|+++
T Consensus 376 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 376 RMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 99976 3444 577999999999999999999999999976
No 207
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.87 E-value=9.9e-09 Score=89.80 Aligned_cols=97 Identities=11% Similarity=0.023 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..+++.|+|++|+..|++++.+.|.+ ..+++++|.+|..+++|++|+.++++++++
T Consensus 87 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 87 EISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN---------------VKALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 35788899999999999999999999999998764 367999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHH-HHHHHHH
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAE-LDIKKAI 428 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~-~~~~~al 428 (435)
+|++..++..++.++..++++.++. ..|.+.+
T Consensus 152 ~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 152 NPNNLDIRNSYELCVNKLKEARKKDKLTFGGMF 184 (198)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHC----------
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999888 4444444
No 208
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.85 E-value=8.4e-09 Score=95.92 Aligned_cols=111 Identities=20% Similarity=0.156 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+...|..++..|+|++|+..|++++.+........ ......++.++|.+|..+|++++|+.+++++++
T Consensus 151 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD-------DPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT-------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4456678889999999999999999999999854321110 022457799999999999999999999999998
Q ss_pred h-------------------------------------------------CCCCHHHHHHHHHHHHhcccHHHHHHHHHH
Q 013843 396 C-------------------------------------------------DCHNVKALYRRAQAYMEIADLILAELDIKK 426 (435)
Q Consensus 396 ~-------------------------------------------------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~ 426 (435)
+ +|....+++.+|.+|..+|++++|+.+|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 303 (311)
T 3nf1_A 224 RAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEA 303 (311)
T ss_dssp HHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 4 466678899999999999999999999999
Q ss_pred HHHhCCC
Q 013843 427 AIEADPQ 433 (435)
Q Consensus 427 al~l~P~ 433 (435)
++++.|.
T Consensus 304 al~l~~~ 310 (311)
T 3nf1_A 304 AMRSRKQ 310 (311)
T ss_dssp HHHHHC-
T ss_pred HHHHhhc
Confidence 9999886
No 209
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.84 E-value=1.6e-08 Score=98.51 Aligned_cols=106 Identities=13% Similarity=0.079 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+..+...|..++..|+|++|+..|++++++.|.+. .....+++++|.+|..+|++++|+.++++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDL-----------RTLSAIYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccCh-----------hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 46678888999999999999999999999999976542 2345679999999999999999999999999
Q ss_pred hh------CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 395 DC------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 395 ~~------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
++ +|....+++.+|.+|..+|++++|+..|++++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 114 TLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 98 57778999999999999999999999999999873
No 210
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.81 E-value=1.6e-08 Score=94.57 Aligned_cols=105 Identities=16% Similarity=0.131 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|+++++..|.+. .....++.++|.+|..++++++|+.++++++++
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 72 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL-----------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 72 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccH-----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 356778899999999999999999999999876542 234577999999999999999999999999987
Q ss_pred ------CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 397 ------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 397 ------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
.|....+++.+|.++..+|++++|+..|++++++.|
T Consensus 73 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 73 ARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISR 114 (338)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 455678999999999999999999999999998865
No 211
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.81 E-value=2.4e-08 Score=79.73 Aligned_cols=85 Identities=15% Similarity=0.038 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|+|++|+..|.+++...|.+ ..+++++|.++..++++++|+.+++++++++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY---------------SKAYGRMGLALSSLNKHVEAVAYYKKALELD 110 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 4567788999999999999999999999987764 3568999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcccH
Q 013843 398 CHNVKALYRRAQAYMEIADL 417 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~ 417 (435)
|++..+++.+|.++..+|++
T Consensus 111 p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 111 PDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp TTCHHHHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHHHhcC
Confidence 99999999999999999875
No 212
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.80 E-value=2.5e-08 Score=81.13 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=65.7
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
...++++|.++++.++|++|+.++.+++.++|+++.+++++|.++..+|++++|+.+|+++++++|++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh
Confidence 46689999999999999999999999999999999999999999999999999999999999999986
No 213
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.80 E-value=4e-08 Score=96.84 Aligned_cols=109 Identities=16% Similarity=0.133 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+....+........|+|++|+..|+++|++........ +...+.++.|+|.+|..+|+|++|+.+|+++|
T Consensus 295 ~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL 367 (433)
T 3qww_A 295 VRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-------NVYMLHMMYQAMGVCLYMQDWEGALKYGQKII 367 (433)
T ss_dssp HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-------chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 34444555556666667899999999999999875432211 12356779999999999999999999999999
Q ss_pred hh-----CCC---CHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 395 DC-----DCH---NVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 395 ~~-----~p~---~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
++ .|+ -...++++|.+|..+|+|++|+..|++|+++
T Consensus 368 ~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 368 KPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 76 344 4577999999999999999999999999986
No 214
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.80 E-value=3.4e-08 Score=95.58 Aligned_cols=108 Identities=16% Similarity=0.096 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+..+...|..++..|+++.|+..|.+|+++.+..... ....+.+++++|.+|..+|+|++|+.++.+|+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 209 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAAL 209 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4567788889999999999999999999999988765432 12356789999999999999999999999999
Q ss_pred hhCCC------CHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 395 DCDCH------NVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 395 ~~~p~------~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
++.+. ...+++++|.+|..+|++++|+.+|++++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~ 251 (378)
T 3q15_A 210 ELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKV 251 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 87431 2578999999999999999999999999983
No 215
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.79 E-value=2e-08 Score=97.13 Aligned_cols=104 Identities=16% Similarity=0.128 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh-
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC- 396 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~- 396 (435)
+..+...|..++..|+|++|+..|+++++..|.+. .....+++++|.+|..+|+|++|+.++++++++
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL-----------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 77 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccH-----------HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 56788899999999999999999999999976542 234578999999999999999999999999987
Q ss_pred -----CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 397 -----DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 397 -----~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
.|....+++.+|.++..+|++++|+..|++++++.|
T Consensus 78 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 118 (406)
T 3sf4_A 78 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISR 118 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 445578999999999999999999999999998865
No 216
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.78 E-value=2.5e-08 Score=80.20 Aligned_cols=84 Identities=19% Similarity=0.148 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|+|++|+..|+++++..|.+ ..+++++|.++.+++++++|+.+++++++++
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 114 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF---------------IKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 4567889999999999999999999999997764 3669999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccc
Q 013843 398 CHNVKALYRRAQAYMEIAD 416 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~ 416 (435)
|.+..+++.++.++..+|+
T Consensus 115 p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 115 SSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp GGGTHHHHHHHHHHHHHTC
T ss_pred CCchHHHHHHHHHHHHhcC
Confidence 9999999999999998764
No 217
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.78 E-value=1.7e-08 Score=85.27 Aligned_cols=91 Identities=8% Similarity=-0.076 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+..+.+.|..+++.|+|++|+..|.++|++.|.+ ..+|+++|.+|..+|+|++|+.+|.+++
T Consensus 60 ~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~a~~~~g~~~~~~g~~~~A~~~~~~al 124 (162)
T 3rkv_A 60 RKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETN---------------EKALFRRAKARIAAWKLDEAEEDLKLLL 124 (162)
T ss_dssp HTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc---------------hHHHHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 3456788999999999999999999999999998875 3679999999999999999999999999
Q ss_pred hhCCCCH-HHHHHHHHHHHhcccHHHH
Q 013843 395 DCDCHNV-KALYRRAQAYMEIADLILA 420 (435)
Q Consensus 395 ~~~p~~~-~a~~~~a~~~~~lg~~~eA 420 (435)
+++|++. .+...++.+...+.++.++
T Consensus 125 ~l~p~~~~~~~~~l~~~~~~~~~~~~~ 151 (162)
T 3rkv_A 125 RNHPAAASVVAREMKIVTERRAEKKAD 151 (162)
T ss_dssp HHCGGGHHHHHHHHHHHHHHHHHHTTS
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 6677778887777665443
No 218
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.78 E-value=4.8e-08 Score=99.98 Aligned_cols=101 Identities=13% Similarity=0.064 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..+.+.|++++|+..|++++++.|.+. .++++++.+|.+.|++++|+..++++++.+
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 437 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFG---------------PAWIGFAHSFAIEGEHDQAISAYTTAARLF 437 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 44566678888888888888888888888766532 334555555555555555555555555555
Q ss_pred CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
|++..+|+.+|.+|...|++++|++.|+++++++|+
T Consensus 438 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 473 (597)
T 2xpi_A 438 QGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQY 473 (597)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 555555555555555555555555555555555554
No 219
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.77 E-value=3.3e-08 Score=95.77 Aligned_cols=92 Identities=14% Similarity=0.032 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+.++|..+++.|+|++|+..|+++|++.|.+ ..+++++|.+|..+++|++|+.++++|+++
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN---------------TKALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchh---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 45667889999999999999999999999998764 367999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcccHHHHHHH
Q 013843 397 DCHNVKALYRRAQAYMEIADLILAELD 423 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~lg~~~eA~~~ 423 (435)
+|++..++..++.++..++++++|.+.
T Consensus 337 ~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 337 APEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988754
No 220
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.77 E-value=3e-08 Score=77.04 Aligned_cols=66 Identities=14% Similarity=0.091 Sum_probs=63.9
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
.+++++|.++..++++++|+.+++++++++|.+..+++.+|.++..+|++++|+.+|+++++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 458899999999999999999999999999999999999999999999999999999999999997
No 221
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.76 E-value=2.4e-08 Score=92.82 Aligned_cols=110 Identities=18% Similarity=0.113 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+...|..++..|+|++|+..|++++++........ ......++.++|.++..++++++|+.+++++++
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 181 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD-------HPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 181 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4466788899999999999999999999999863210000 022457799999999999999999999999999
Q ss_pred h--------CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 396 C--------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 396 ~--------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
+ +|....+++.+|.++..+|++++|+..|++++++.|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 182 IYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp HHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 8 777788999999999999999999999999998643
No 222
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.76 E-value=2.7e-08 Score=85.33 Aligned_cols=114 Identities=11% Similarity=0.032 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCh--------------HHHHHHHH------HHHHHHhHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD--------------DEQKLVKS------LRVSCWLNSA 374 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~--------------~~~~~~~~------~~~~~~~nla 374 (435)
......+...|..+...|++++|+..|++++...| ++.... +....... ....+++++|
T Consensus 37 P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la 115 (176)
T 2r5s_A 37 QSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELA 115 (176)
T ss_dssp HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHH
Confidence 34466788899999999999999999999988776 321100 00111111 1246789999
Q ss_pred HHHHHccCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 375 ACCLKLKDYQGAIELCSKVLDCDCHN--VKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 375 ~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
.++..+|++++|+..++++++.+|++ ..+++.+|.++..+|++++|+..|+++|.
T Consensus 116 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 116 VQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999999999976 66999999999999999999999999985
No 223
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.75 E-value=3.7e-08 Score=95.20 Aligned_cols=107 Identities=16% Similarity=0.088 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|++++++.+..... .....++.++|.+|..+|++++|+.++++++++
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 256 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK---------AAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 256 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 34567788999999999999999999999988765321 223456778888888888888888888888877
Q ss_pred CCCC------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 397 DCHN------VKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 397 ~p~~------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
.+.. ..+++.+|.++..+|++++|+..|++++++.+
T Consensus 257 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 298 (406)
T 3sf4_A 257 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 298 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 6655 66777888888888888888888888877643
No 224
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.75 E-value=4e-08 Score=78.17 Aligned_cols=78 Identities=14% Similarity=0.126 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
......+...|..++..|+|++|+..|++++++.|.+. .+++++|.|+.++|++++|+..+++++
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~al 88 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQ---------------ALRVFYAMVLYNLGRYEQGVELLLKII 88 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCch---------------HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35577899999999999999999999999999988763 669999999999999999999999999
Q ss_pred hhCCCCHHHHHHH
Q 013843 395 DCDCHNVKALYRR 407 (435)
Q Consensus 395 ~~~p~~~~a~~~~ 407 (435)
+.+|+++......
T Consensus 89 ~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 89 AETSDDETIQSYK 101 (117)
T ss_dssp HHHCCCHHHHHTH
T ss_pred HhCCCcHHHHHHH
Confidence 9999998765433
No 225
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.75 E-value=1.2e-07 Score=82.49 Aligned_cols=109 Identities=13% Similarity=0.048 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+..+...|..+...|+|++|+..|.+++.+....... ......+++++|.++..+|++++|+.++.+++
T Consensus 63 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 134 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED--------PLAASANAYEVATVALHFGDLAGARQEYEKSL 134 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc--------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3456778899999999999999999999999996543321 12346779999999999999999999999999
Q ss_pred hhCC--CC----HHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 395 DCDC--HN----VKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 395 ~~~p--~~----~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
++.+ .+ ..++..+|.++..+|++++|++.+++++++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 135 VYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 7642 22 3557899999999999999999999999874
No 226
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.73 E-value=1.3e-07 Score=86.89 Aligned_cols=62 Identities=15% Similarity=0.058 Sum_probs=44.7
Q ss_pred HHHhHHHHHHHH----ccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhC
Q 013843 368 SCWLNSAACCLK----LKDYQGAIELCSKVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIEAD 431 (435)
Q Consensus 368 ~~~~nla~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~----lg~~~eA~~~~~~al~l~ 431 (435)
.+++++|.+|.. .+++++|+.+++++++.+ ++.+++++|.+|.. .+++++|+.+|+++++++
T Consensus 75 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 75 NGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 144 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC
Confidence 456777777777 777777777777777663 67777777777777 777777777777777665
No 227
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.72 E-value=6e-08 Score=91.19 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=83.5
Q ss_pred HHHHHHHHHHH-------HcCCH-------HHHHHHHHHHHH-HhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCH
Q 013843 319 GRKKEEGNLLF-------KNGKY-------ERAGKKYNKAAD-CVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDY 383 (435)
Q Consensus 319 ~~~~~~g~~~~-------~~g~y-------~~A~~~y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~ 383 (435)
..+...|..+. +.|++ ++|+..|++|++ +.|.. ..+|.++|..+.++|++
T Consensus 51 ~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~---------------~~~~~~~~~~~~~~~~~ 115 (308)
T 2ond_A 51 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMKY 115 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTC---------------HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCCH
Confidence 34555565554 45775 999999999999 66654 35688999999999999
Q ss_pred HHHHHHHHHHHhhCCCCHH-HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 384 QGAIELCSKVLDCDCHNVK-ALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 384 ~~A~~~~~~al~~~p~~~~-a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
++|+..|+++++++|.++. +|..+|.++..+|++++|+..|++|++++|.+
T Consensus 116 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 116 EKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 167 (308)
T ss_dssp HHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC
T ss_pred HHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999998886 89999999999999999999999999888754
No 228
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.72 E-value=9.7e-08 Score=89.73 Aligned_cols=112 Identities=11% Similarity=-0.027 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCC-CCh---------HHHHHHHHHH----------HHHHhHHHHHHH
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGS-FVD---------DEQKLVKSLR----------VSCWLNSAACCL 378 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~-~~~---------~~~~~~~~~~----------~~~~~nla~~~~ 378 (435)
..+...|..+.+.|++++|...|++++++.|.+.. ... ....+..... ..++...+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~ 179 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34566677777777777777777777776655431 000 0000000000 012222332222
Q ss_pred -HccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 379 -KLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 379 -~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
.+|++++|+..|+++++.+|+++.+|..++..+..+|++++|+..|++++..
T Consensus 180 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 180 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 2567777777777777777777777777777777777777777777777774
No 229
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.72 E-value=8e-08 Score=93.44 Aligned_cols=105 Identities=13% Similarity=0.113 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..++..|+|++|+..|++++++.+..... .....++.++|.+|..+|++++|+.++++++++.
T Consensus 223 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 223 GRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDR---------AAERRANSNLGNSHIFLGQFEDAAEHYKRTLALA 293 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH---------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 4467778999999999999999999999988754321 1233456677777777777777777777777665
Q ss_pred CCC------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 398 CHN------VKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 398 p~~------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
+.. ..+++.+|.++..+|++++|+.+|++++++.
T Consensus 294 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 333 (411)
T 4a1s_A 294 VELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIA 333 (411)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 533 5666667777777777777777777766653
No 230
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.71 E-value=4.3e-08 Score=97.34 Aligned_cols=117 Identities=9% Similarity=-0.002 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCh------------------------HH----HHHHH------
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD------------------------DE----QKLVK------ 363 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~------------------------~~----~~~~~------ 363 (435)
...+...|..+...|++++|+..|.++++..|.+..... .. .....
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 326 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKA 326 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 345778899999999999999999999999876531100 00 00000
Q ss_pred ----HHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHH---HHHHHHHH-HHhcccHHHHHHHHHHHHHhCCCC
Q 013843 364 ----SLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVK---ALYRRAQA-YMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 364 ----~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~---a~~~~a~~-~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.....+++++|.+|..+++|++|+.+|+++|+++|++.. .++++|.. +..++++++|+.+|++|++++|++
T Consensus 327 ~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~ 405 (472)
T 4g1t_A 327 DEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKS 405 (472)
T ss_dssp HHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCC
T ss_pred hhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc
Confidence 000123456777777777777777777777777765542 35555543 346677777777777777777754
No 231
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.71 E-value=1.1e-07 Score=74.09 Aligned_cols=83 Identities=18% Similarity=0.095 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+......|..+|..++|..|+..|++|++..+...... .....++.++|.||.++|+++.|+.+++++++++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~--------~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIST--------IDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCS--------SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCc--------ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 45677899999999999999999999999875442110 1135778999999999999999999999999999
Q ss_pred CCCHHHHHHHH
Q 013843 398 CHNVKALYRRA 408 (435)
Q Consensus 398 p~~~~a~~~~a 408 (435)
|++..++.+++
T Consensus 77 P~~~~~~~n~~ 87 (104)
T 2v5f_A 77 PEHQRANGNLK 87 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHhhHH
Confidence 99999988887
No 232
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.71 E-value=5.8e-08 Score=89.43 Aligned_cols=101 Identities=9% Similarity=-0.049 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC--
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD-- 397 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~-- 397 (435)
..+..|..+++.++|+.|+..|++++...+. .+...+++++|.++..+|++++|+.+|++++.-.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~-------------~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~ 203 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDK-------------FLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAG 203 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCH-------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCc-------------ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC
Confidence 6788888999999999999999866543210 1224579999999999999999999999999654
Q ss_pred CC-CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 398 CH-NVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 398 p~-~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
|. .+.+++++|.++.++|+.++|...|++++..+|+
T Consensus 204 P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 204 EACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp TTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred ccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 65 6689999999999999999999999999999996
No 233
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.70 E-value=6.7e-08 Score=90.32 Aligned_cols=106 Identities=16% Similarity=0.089 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|++++|+..|++++++.+..... .....++.++|.++..+|++++|+.++++++++
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 252 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK---------AAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 252 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH---------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCh---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34567788899999999999999999999887653321 222345666666666666666666666666665
Q ss_pred CCCC------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 397 DCHN------VKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 397 ~p~~------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
.+.. ..+++.+|.++..+|++++|+..|++++++.
T Consensus 253 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 293 (338)
T 3ro2_A 253 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 293 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 5443 4566666666666666666666666666553
No 234
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.70 E-value=5e-08 Score=80.68 Aligned_cols=87 Identities=18% Similarity=0.197 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHcc---CHHHHHHHHHHHHhhC-C-CCHHHHHHHH
Q 013843 334 YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK---DYQGAIELCSKVLDCD-C-HNVKALYRRA 408 (435)
Q Consensus 334 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~a~~~~a 408 (435)
...+.+.|.+.+...+.+ ..+.+++|.|+.+.+ +.++++..++.+++.+ | ++..++|++|
T Consensus 14 l~~~~~~y~~e~~~~~~~---------------~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LA 78 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVS---------------KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLA 78 (152)
T ss_dssp HHHHHHHHHHHHHTTCCC---------------HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCc---------------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHH
Confidence 445667777776644422 366899999999988 6779999999999999 7 6799999999
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 409 QAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 409 ~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
.+++++++|++|+++++++|+++|+|+
T Consensus 79 v~~~kl~~Y~~A~~y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 79 VGNYRLKEYEKALKYVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 999999999999999999999999883
No 235
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.70 E-value=9.9e-08 Score=74.65 Aligned_cols=68 Identities=22% Similarity=0.214 Sum_probs=65.2
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+..++++|.++...++|++|+..+++++..+|.++.+++.+|.++..+|++++|+..++++++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW 71 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc
Confidence 45688999999999999999999999999999999999999999999999999999999999999975
No 236
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.68 E-value=1.2e-07 Score=73.15 Aligned_cols=84 Identities=11% Similarity=0.072 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.+..+...|..++..|+|++|+..|++++++.|... .+++++|.||.++|++++|+..+++++++
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYV---------------GTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 356788999999999999999999999999998765 56999999999999999999999999998
Q ss_pred CCC--CHHHHHHHHHHHHhcc
Q 013843 397 DCH--NVKALYRRAQAYMEIA 415 (435)
Q Consensus 397 ~p~--~~~a~~~~a~~~~~lg 415 (435)
.|. +..+...+...+...+
T Consensus 71 ~~~~~~~~~~~~l~~~l~~~~ 91 (100)
T 3ma5_A 71 AREEGTQKDLSELQDAKLKAE 91 (100)
T ss_dssp HHHHSCHHHHHHHHHHHHHHH
T ss_pred hhcCCchhHHHHHHHHHHHcc
Confidence 764 3444444555444433
No 237
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.68 E-value=1.7e-07 Score=92.37 Aligned_cols=109 Identities=9% Similarity=0.036 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...++...+....+.++|+|++|+..|+++|++........ +...+.++.|+|.+|..+|+|++|+.+|.++|
T Consensus 284 ~~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L 356 (429)
T 3qwp_A 284 WKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-------NIYQLKVLDCAMDACINLGLLEEALFYGTRTM 356 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 34456666777788899999999999999998754322211 12356789999999999999999999999999
Q ss_pred hh-----CCCC---HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 395 DC-----DCHN---VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 395 ~~-----~p~~---~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
++ .|++ ...++++|.+|..+|++++|+..|++|+++
T Consensus 357 ~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 357 EPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 76 3444 577999999999999999999999999986
No 238
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.66 E-value=3.4e-07 Score=83.99 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=45.3
Q ss_pred HHHhHHHHHHHH----ccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhC
Q 013843 368 SCWLNSAACCLK----LKDYQGAIELCSKVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIEAD 431 (435)
Q Consensus 368 ~~~~nla~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~----lg~~~eA~~~~~~al~l~ 431 (435)
.+++++|.+|.. .+++++|+.+++++++.+ +..+++++|.+|.. .+++++|+.+|+++++++
T Consensus 111 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~ 180 (273)
T 1ouv_A 111 EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK 180 (273)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 557777777777 777777777777777765 56777777777777 777777777777777654
No 239
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.66 E-value=4.6e-08 Score=81.73 Aligned_cols=72 Identities=13% Similarity=0.146 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHcc-----
Q 013843 317 AAGRKKEEGNLLFKNGKY----------ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK----- 381 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y----------~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~----- 381 (435)
.+..+.+.|..+...+++ ++|+..|++||+++|... .+|+|+|.+|..++
T Consensus 35 ~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~---------------~A~~~LG~ay~~lg~l~P~ 99 (158)
T 1zu2_A 35 DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKD---------------EAVWCIGNAYTSFAFLTPD 99 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcH---------------HHHHHHHHHHHHhcccCcc
Confidence 355677888888888765 599999999999998764 67999999999885
Q ss_pred ------CHHHHHHHHHHHHhhCCCCHHH
Q 013843 382 ------DYQGAIELCSKVLDCDCHNVKA 403 (435)
Q Consensus 382 ------~~~~A~~~~~~al~~~p~~~~a 403 (435)
+|++|+.+|++|++++|++...
T Consensus 100 ~~~a~g~~~eA~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 100 ETEAKHNFDLATQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred hhhhhccHHHHHHHHHHHHHhCCCCHHH
Confidence 8999999999999999998643
No 240
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.66 E-value=8.6e-08 Score=76.97 Aligned_cols=66 Identities=26% Similarity=0.310 Sum_probs=63.4
Q ss_pred HHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCH---HHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 369 CWLNSAACCLKLKDYQGAIELCSKVLDCDCHNV---KALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 369 ~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~---~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.++++|.+++..|+|++|+..++++++.+|++. .+++.+|.++..+|++++|+..|+++++++|++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 478999999999999999999999999999998 899999999999999999999999999999986
No 241
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.65 E-value=2.4e-07 Score=73.12 Aligned_cols=83 Identities=29% Similarity=0.381 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|++++|+..|++++...|.+ ..+++++|.++..++++++|+..++++++.+
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 107 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 107 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 3457788999999999999999999999987654 2568899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcc
Q 013843 398 CHNVKALYRRAQAYMEIA 415 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg 415 (435)
|++..+++.+|.++..+|
T Consensus 108 ~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 108 PNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp TTCHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHhcc
Confidence 999999999999988764
No 242
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.61 E-value=4e-07 Score=85.39 Aligned_cols=102 Identities=13% Similarity=-0.091 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHH----HHc---cCHHHHHH
Q 013843 318 AGRKKEEGNLLFKNG--KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACC----LKL---KDYQGAIE 388 (435)
Q Consensus 318 a~~~~~~g~~~~~~g--~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~----~~~---~~~~~A~~ 388 (435)
...+..++..+...+ ++++|+..+.++|..+|.+. .+++.++.++ ..+ +++++++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y---------------~aW~~R~~iL~~~~~~l~~~~~~~~EL~ 131 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNY---------------QIWNYRQLIIGQIMELNNNDFDPYREFD 131 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCC---------------HHHHHHHHHHHHHHHHTTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccH---------------HHHHHHHHHHHHHHHhccccCCHHHHHH
Confidence 345677788888888 99999999999999998876 5588888888 666 78999999
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHhcccHH--HHHHHHHHHHHhCCCC
Q 013843 389 LCSKVLDCDCHNVKALYRRAQAYMEIADLI--LAELDIKKAIEADPQN 434 (435)
Q Consensus 389 ~~~~al~~~p~~~~a~~~~a~~~~~lg~~~--eA~~~~~~al~l~P~n 434 (435)
.|+++|+.+|+|..+|+.++.++..++.++ ++++.+.++++++|.|
T Consensus 132 ~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N 179 (306)
T 3dra_A 132 ILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN 179 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999 9999999999999987
No 243
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.60 E-value=1.6e-07 Score=96.10 Aligned_cols=102 Identities=14% Similarity=0.079 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHcc--CHHH
Q 013843 318 AGRKKEEGNLLFKNGK----------YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK--DYQG 385 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~----------y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~--~~~~ 385 (435)
...+..++..+...++ |++|+..|.++++..|.+. .+|++++.++.+++ +|++
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y---------------~aW~hR~w~l~~l~~~~~~~ 127 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSY---------------GTWHHRCWLLSRLPEPNWAR 127 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHTCSSCCHHH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcccccHHH
Confidence 3456677777777777 9999999999999998764 67999999999999 7899
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHhCCCC
Q 013843 386 AIELCSKVLDCDCHNVKALYRRAQAYMEIA-DLILAELDIKKAIEADPQN 434 (435)
Q Consensus 386 A~~~~~~al~~~p~~~~a~~~~a~~~~~lg-~~~eA~~~~~~al~l~P~n 434 (435)
|+.+|+++++++|.|..||..|+.++..++ .+++|++++.++++++|+|
T Consensus 128 el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n 177 (567)
T 1dce_A 128 ELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 177 (567)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC
T ss_pred HHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999999999 9999999999999999987
No 244
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.60 E-value=1.2e-07 Score=88.34 Aligned_cols=114 Identities=10% Similarity=-0.076 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCC-------------CChHHHHHHHH------HHHHHHhHHHHHH
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGS-------------FVDDEQKLVKS------LRVSCWLNSAACC 377 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~-------------~~~~~~~~~~~------~~~~~~~nla~~~ 377 (435)
....+...|..+...|++++|+..|++++...|.... ...+....++. -...+++++|.++
T Consensus 150 ~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l 229 (287)
T 3qou_A 150 NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQL 229 (287)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 3567888889999999999998888888776552110 00001111111 1246799999999
Q ss_pred HHccCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 378 LKLKDYQGAIELCSKVLDCDCHN--VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 378 ~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
..+|++++|+..+.++++.+|++ ..++.+++.++..+|+.++|...|++++..
T Consensus 230 ~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 230 HQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999 899999999999999999999999999863
No 245
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.60 E-value=3.2e-07 Score=93.78 Aligned_cols=108 Identities=10% Similarity=0.063 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccC--------
Q 013843 312 QGKIEAAGRKKEEGNLLFKNGKY-ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD-------- 382 (435)
Q Consensus 312 ~~~~~~a~~~~~~g~~~~~~g~y-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~-------- 382 (435)
..+++.............+.++| ++|+..|.++|.++|... .+|++++.++.++++
T Consensus 22 ~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~---------------taW~~R~~~l~~l~~~~~~~~~~ 86 (567)
T 1dce_A 22 EQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFA---------------TLWNCRREVLQHLETEKSPEESA 86 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhH---------------HHHHHHHHHHHhcccccchhhhh
Confidence 34455555555555566667766 568999999999998764 679999999999998
Q ss_pred --HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHhCCCC
Q 013843 383 --YQGAIELCSKVLDCDCHNVKALYRRAQAYMEIA--DLILAELDIKKAIEADPQN 434 (435)
Q Consensus 383 --~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg--~~~eA~~~~~~al~l~P~n 434 (435)
+++|+.+++++++.+|++..+|+.|+.++..++ ++++|++.+.+++++||.|
T Consensus 87 ~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N 142 (567)
T 1dce_A 87 ALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN 142 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcccc
Confidence 999999999999999999999999999999999 7799999999999999987
No 246
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.57 E-value=2.7e-07 Score=70.30 Aligned_cols=68 Identities=15% Similarity=-0.025 Sum_probs=62.2
Q ss_pred HHHHhHHHHHHHHccC---HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKD---YQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~---~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
..++..+|.+++..++ ..+|...+++||+++|+++++++.+|..++..|+|++|+..++++++.+|.+
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 3568888888876665 7999999999999999999999999999999999999999999999999974
No 247
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.56 E-value=2.3e-07 Score=82.18 Aligned_cols=114 Identities=18% Similarity=0.019 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhcc-----------CCCC--ChHHH-----HHHHHHHHHHHhHHHHHHH
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE-----------DGSF--VDDEQ-----KLVKSLRVSCWLNSAACCL 378 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~-----------~~~~--~~~~~-----~~~~~~~~~~~~nla~~~~ 378 (435)
.+..+...|..++..+++++|+..|+++++.... .... +.++. +....-...+++++|.+|.
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~ 96 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLV 96 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4567778888888888888888888888764211 0000 11111 1122223456788888888
Q ss_pred H----ccCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHh----cccHHHHHHHHHHHHHh
Q 013843 379 K----LKDYQGAIELCSKVLDCDC--HNVKALYRRAQAYME----IADLILAELDIKKAIEA 430 (435)
Q Consensus 379 ~----~~~~~~A~~~~~~al~~~p--~~~~a~~~~a~~~~~----lg~~~eA~~~~~~al~l 430 (435)
. .+++++|+.+++++++..+ .++.+++++|.+|.. .+++++|+.+|++++++
T Consensus 97 ~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 97 NRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp CGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred cCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 7 7888888888888888877 358888888888888 78888888888888887
No 248
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.56 E-value=2.7e-07 Score=81.79 Aligned_cols=65 Identities=11% Similarity=-0.114 Sum_probs=59.5
Q ss_pred HHHHhHHHHHHHH----ccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhc-c-----cHHHHHHHHHHHHHhCC
Q 013843 367 VSCWLNSAACCLK----LKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEI-A-----DLILAELDIKKAIEADP 432 (435)
Q Consensus 367 ~~~~~nla~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~l-g-----~~~eA~~~~~~al~l~P 432 (435)
..+++++|.+|.. .+++++|+.++++++++ |.++.+++++|.+|... + ++++|+.+|++|.+...
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 7889999999999 89999999999999999 77889999999999875 3 89999999999998754
No 249
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.55 E-value=5.3e-07 Score=86.66 Aligned_cols=109 Identities=16% Similarity=0.057 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+...|..++..|+|++|+..|.+++.+.+..... .....+++++|.++..+|++++|+.+++++++
T Consensus 51 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~ 121 (373)
T 1hz4_A 51 SRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW---------HYALWSLIQQSEILFAQGFLQTAWETQEKAFQ 121 (373)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcH---------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 345567778888888888888888888888877654321 12234466677777777777777777777766
Q ss_pred hC--------CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 396 CD--------CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 396 ~~--------p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
+. |....++..+|.++..+|++++|...+++++.+.|.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 122 LINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 53 223455666777777777777777777777766553
No 250
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.55 E-value=1.9e-07 Score=74.51 Aligned_cols=68 Identities=24% Similarity=0.193 Sum_probs=64.3
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
...++++|.++...++|++|+.++.++++.+|.++.+++.+|.++..+|++++|+.+|++++.++|++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 45689999999999999999999999999999999999999999999999999999999999998753
No 251
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.55 E-value=5.1e-07 Score=84.67 Aligned_cols=100 Identities=15% Similarity=0.018 Sum_probs=89.9
Q ss_pred HHHHHHHHH----HHc---CCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHH--HHHHHH
Q 013843 320 RKKEEGNLL----FKN---GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQ--GAIELC 390 (435)
Q Consensus 320 ~~~~~g~~~----~~~---g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~--~A~~~~ 390 (435)
.+..++..+ ... +++++++..+.++++.+|.+. .++++++.+..+++.++ +++.++
T Consensus 105 aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny---------------~aW~~R~~vl~~l~~~~~~~EL~~~ 169 (306)
T 3dra_A 105 IWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNH---------------HVWSYRKWLVDTFDLHNDAKELSFV 169 (306)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHhcccChHHHHHHH
Confidence 344455555 445 789999999999999998874 67999999999999999 999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHhccc------HHHHHHHHHHHHHhCCCC
Q 013843 391 SKVLDCDCHNVKALYRRAQAYMEIAD------LILAELDIKKAIEADPQN 434 (435)
Q Consensus 391 ~~al~~~p~~~~a~~~~a~~~~~lg~------~~eA~~~~~~al~l~P~n 434 (435)
+++++.+|.|..||..|+.++..+++ ++++++++++++.++|+|
T Consensus 170 ~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n 219 (306)
T 3dra_A 170 DKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQN 219 (306)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999998 999999999999999987
No 252
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=5.4e-07 Score=73.74 Aligned_cols=82 Identities=15% Similarity=0.054 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
....+...|..++..|+|++|+..|++++.+.|.+ ..+++++|.++..++++++|+.++++++++
T Consensus 64 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 64 QAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD---------------VKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 36778899999999999999999999999998765 366899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh
Q 013843 397 DCHNVKALYRRAQAYME 413 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~~ 413 (435)
+|++..++..++.+...
T Consensus 129 ~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 129 EPKNKVFQEALRNISGP 145 (148)
T ss_dssp CSSCHHHHHHHHHHHCS
T ss_pred CCCcHHHHHHHHHHHhh
Confidence 99999999888877543
No 253
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.52 E-value=4.9e-07 Score=71.28 Aligned_cols=85 Identities=12% Similarity=0.013 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
...+...|..++..|+|++|+..|++++.+.|.. ..+++++|.+|..+|++++|+..++++++++
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY---------------SVAWKWLGKTLQGQGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 4578899999999999999999999999998765 3568999999999999999999999999998
Q ss_pred CC--CHHHHHHHHHHHHhcccH
Q 013843 398 CH--NVKALYRRAQAYMEIADL 417 (435)
Q Consensus 398 p~--~~~a~~~~a~~~~~lg~~ 417 (435)
|. +..++..+...+..+++.
T Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 84 QSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhccc
Confidence 74 445555555555555443
No 254
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.52 E-value=1e-06 Score=83.33 Aligned_cols=101 Identities=12% Similarity=0.122 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccC-HHHHHHHHHHHHh
Q 013843 319 GRKKEEGNLLFKNG--KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD-YQGAIELCSKVLD 395 (435)
Q Consensus 319 ~~~~~~g~~~~~~g--~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~-~~~A~~~~~~al~ 395 (435)
..+..++..+...+ .|++++..+.++++.+|.+. .++++++.+...++. +++++.++.++++
T Consensus 109 ~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy---------------~AW~~R~~vl~~l~~~~~eel~~~~~~I~ 173 (331)
T 3dss_A 109 GTWHHRCWLLSRLPEPNWARELELCARFLEADERNF---------------HCWDYRRFVAAQAAVAPAEELAFTDSLIT 173 (331)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence 34555666677777 48999999999999888764 668899999999988 6999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhc--------------ccHHHHHHHHHHHHHhCCCC
Q 013843 396 CDCHNVKALYRRAQAYMEI--------------ADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~~~~l--------------g~~~eA~~~~~~al~l~P~n 434 (435)
.+|.|..||..++.++..+ +.++++++++.+++.++|+|
T Consensus 174 ~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d 226 (331)
T 3dss_A 174 RNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPND 226 (331)
T ss_dssp HCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTC
T ss_pred HCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999888 67899999999999999987
No 255
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.50 E-value=2.9e-07 Score=85.41 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=65.3
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+..+.++|.++++.|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 71 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 71 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 35688999999999999999999999999999999999999999999999999999999999999986
No 256
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.49 E-value=8.8e-07 Score=83.73 Aligned_cols=113 Identities=13% Similarity=0.115 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCHH-HHHHHHHHHHHHhccCCCCCh-----------------------HHHHH------HHHHHHHHHh
Q 013843 322 KEEGNLLFKNGKYE-RAGKKYNKAADCVSEDGSFVD-----------------------DEQKL------VKSLRVSCWL 371 (435)
Q Consensus 322 ~~~g~~~~~~g~y~-~A~~~y~~al~~~~~~~~~~~-----------------------~~~~~------~~~~~~~~~~ 371 (435)
.+......+.|+|. +|+..+.++|.++|....... ++..- .......+++
T Consensus 33 ~~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~ 112 (331)
T 3dss_A 33 TQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWH 112 (331)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 33344445678876 799999999999987642100 00000 0001113444
Q ss_pred HHHHHHHHcc--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhccc-HHHHHHHHHHHHHhCCCC
Q 013843 372 NSAACCLKLK--DYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIAD-LILAELDIKKAIEADPQN 434 (435)
Q Consensus 372 nla~~~~~~~--~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~-~~eA~~~~~~al~l~P~n 434 (435)
.++.++.+++ .|++++.+|+++++.+|.|..||..++.++..++. ++++++++.++++.+|+|
T Consensus 113 hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N 178 (331)
T 3dss_A 113 HRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 178 (331)
T ss_dssp HHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCC
Confidence 5555555555 25555555555555555555555555555555555 355555555555555554
No 257
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.49 E-value=2e-07 Score=91.60 Aligned_cols=77 Identities=10% Similarity=0.194 Sum_probs=65.5
Q ss_pred EEEEEEecCCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEE
Q 013843 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYY 293 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~ 293 (435)
+||+|+. ||+.|+++ + +.|+.|.+|.+.+++||+.+|.+|+.||+..|.+++..+||..+. +|.++.|
T Consensus 166 i~y~g~~-dG~~fd~~-~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l--------ag~~~~F 233 (432)
T 1w26_A 166 IDFTGSV-DGEEFEGG-K--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL--------KGKAAKF 233 (432)
T ss_dssp ECEEEES-SSCBCSSC-C--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT--------SSCEEEE
T ss_pred EEEEEee-CCeEccCC-C--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC--------CCceEEE
Confidence 4566663 78888877 3 689999999999999999999999999999999999999986432 4678999
Q ss_pred EEEEEEEEe
Q 013843 294 EVEMMDFIK 302 (435)
Q Consensus 294 ~iel~~~~~ 302 (435)
.++|.++..
T Consensus 234 ~V~v~~v~~ 242 (432)
T 1w26_A 234 AINLKKVEE 242 (432)
T ss_dssp EEECCEECC
T ss_pred EEEEEEEec
Confidence 999999874
No 258
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.47 E-value=5.8e-07 Score=70.00 Aligned_cols=67 Identities=22% Similarity=0.128 Sum_probs=61.3
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhC-------CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCD-------CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~-------p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.-++.+|..+++.++|..|+..+++|++.. +.....+..+|.++.++|++++|+..++++++++|++
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 347899999999999999999999999863 3457889999999999999999999999999999987
No 259
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.43 E-value=8.3e-07 Score=88.81 Aligned_cols=108 Identities=13% Similarity=-0.039 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+.++|..|..+|+|++|+.+|+++|++........ +...+..++|+|.+|..+|+|++|+..|++||+
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYA 421 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4567788899999999999999999999999864322111 123467799999999999999999999999997
Q ss_pred h-----CCCC---HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 396 C-----DCHN---VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 396 ~-----~p~~---~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
+ .|++ .+.+-.++.++..++.|++|...|.++.+-
T Consensus 422 i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 422 ILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 4555 466788999999999999999999998764
No 260
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.42 E-value=2.5e-06 Score=70.01 Aligned_cols=89 Identities=11% Similarity=-0.065 Sum_probs=80.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH----ccCHHHHHHHHHHHHhhCCC
Q 013843 324 EGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK----LKDYQGAIELCSKVLDCDCH 399 (435)
Q Consensus 324 ~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----~~~~~~A~~~~~~al~~~p~ 399 (435)
.|..+...+.+++|+..|+++.+.. + ..+++++|.+|.. .+++++|+.++++|.+. .
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g--~---------------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN--S---------------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC--C---------------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C
Confidence 6777777888999999999999863 1 3679999999999 89999999999999987 6
Q ss_pred CHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhC
Q 013843 400 NVKALYRRAQAYME----IADLILAELDIKKAIEAD 431 (435)
Q Consensus 400 ~~~a~~~~a~~~~~----lg~~~eA~~~~~~al~l~ 431 (435)
++.+++++|.+|.. .+++++|+.+|++|.++.
T Consensus 92 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 92 DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 89999999999999 999999999999999874
No 261
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.39 E-value=4.2e-06 Score=80.30 Aligned_cols=108 Identities=13% Similarity=-0.005 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..++..|+|++|+..|++++.+.+....... .....++.++|.++..+|++++|..++.+++.+.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~-------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL-------PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTS-------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccC-------cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 344677899999999999999999999998764322100 1134668899999999999999999999999987
Q ss_pred CC-----CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 398 CH-----NVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 398 p~-----~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
+. ...+++.+|.++..+|++++|+..+++++.+.+
T Consensus 166 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 166 SSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp TTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred hccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 75 346889999999999999999999999998743
No 262
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.39 E-value=1.3e-06 Score=82.92 Aligned_cols=97 Identities=16% Similarity=0.005 Sum_probs=49.0
Q ss_pred HHHHHHHHcC-CHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHc-c-CHHHHHHHHHHHHhhCCC
Q 013843 323 EEGNLLFKNG-KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL-K-DYQGAIELCSKVLDCDCH 399 (435)
Q Consensus 323 ~~g~~~~~~g-~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-~-~~~~A~~~~~~al~~~p~ 399 (435)
.++..+...+ .+++++..+.++|..+|.+. .+++.++.++.++ + ++++++.+|+++|+.+|+
T Consensus 93 ~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny---------------~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpk 157 (349)
T 3q7a_A 93 YRFSLLTSLNKSLEDELRLMNEFAVQNLKSY---------------QVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPK 157 (349)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTTCCCH---------------HHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTT
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCC
Confidence 3344444444 25555555555554444432 3355555555544 4 455555555555555555
Q ss_pred CHHHHHHHHHHHHhcccHH--------HHHHHHHHHHHhCCCC
Q 013843 400 NVKALYRRAQAYMEIADLI--------LAELDIKKAIEADPQN 434 (435)
Q Consensus 400 ~~~a~~~~a~~~~~lg~~~--------eA~~~~~~al~l~P~n 434 (435)
|..||+.|+.++..++.++ ++++.++++++++|.|
T Consensus 158 Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 158 NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 5555555555555555544 5555555555555544
No 263
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.38 E-value=2.2e-06 Score=81.41 Aligned_cols=92 Identities=16% Similarity=0.121 Sum_probs=83.7
Q ss_pred HHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHcc-CHHHHHHHHHHHHhhCCCCHHHHHH
Q 013843 328 LFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK-DYQGAIELCSKVLDCDCHNVKALYR 406 (435)
Q Consensus 328 ~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~ 406 (435)
..+....++|+..+.++|.++|.+. .+++.++.++..++ .+++++..++++|..+|++..+|+.
T Consensus 64 ~~~~e~se~AL~lt~~~L~~nP~~y---------------taWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~h 128 (349)
T 3q7a_A 64 AAKEEKSERALELTEIIVRMNPAHY---------------TVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHH 128 (349)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHhCchhH---------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 3344556789999999999998864 67999999999999 5999999999999999999999999
Q ss_pred HHHHHHhc-c-cHHHHHHHHHHHHHhCCCC
Q 013843 407 RAQAYMEI-A-DLILAELDIKKAIEADPQN 434 (435)
Q Consensus 407 ~a~~~~~l-g-~~~eA~~~~~~al~l~P~n 434 (435)
|+.++..+ + +++++++.+.++++++|.|
T Consensus 129 R~wlL~~l~~~~~~~EL~~~~k~L~~dpkN 158 (349)
T 3q7a_A 129 RLLLLDRISPQDPVSEIEYIHGSLLPDPKN 158 (349)
T ss_dssp HHHHHHHHCCSCCHHHHHHHHHHTSSCTTC
T ss_pred HHHHHHHhcCCChHHHHHHHHHHHHhCCCC
Confidence 99999998 8 9999999999999999987
No 264
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.25 E-value=5.2e-06 Score=84.00 Aligned_cols=117 Identities=11% Similarity=-0.011 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCh----------HHHHHHHHHHH----------HHHhHHHH-H
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD----------DEQKLVKSLRV----------SCWLNSAA-C 376 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~----------~~~~~~~~~~~----------~~~~nla~-~ 376 (435)
...+...|..+.+.|++++|...|++++++.|.+....- ...+....... .++...+. +
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~ 400 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 400 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHH
Confidence 345666777788888999999999999887664321000 00011111111 11222222 2
Q ss_pred HHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 377 CLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 377 ~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+..+|++++|...|+++++.+|+++.+|..++..+..+|++++|+..|++|+...|.+
T Consensus 401 ~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~ 458 (530)
T 2ooe_A 401 YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLP 458 (530)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSC
T ss_pred HHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCC
Confidence 4468889999999999999999999999999999999999999999999999886643
No 265
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.23 E-value=4.7e-06 Score=84.31 Aligned_cols=101 Identities=13% Similarity=0.118 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-HhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccC
Q 013843 318 AGRKKEEGNLLFK-------NGKYE-------RAGKKYNKAAD-CVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD 382 (435)
Q Consensus 318 a~~~~~~g~~~~~-------~g~y~-------~A~~~y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~ 382 (435)
...+...|..+.+ .|+++ +|+..|++|++ +.|.. ..+++++|..+.++|+
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~---------------~~l~~~~~~~~~~~g~ 336 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMK 336 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSC---------------HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCC
Confidence 3456667777765 78887 89999999997 66654 3568888888889999
Q ss_pred HHHHHHHHHHHHhhCCCCH-HHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 383 YQGAIELCSKVLDCDCHNV-KALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~~-~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
+++|...|+++++++|.++ .+|..++.++..+|++++|++.|++|++..|.
T Consensus 337 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 337 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 9999999999999988885 68888888888888888888888888887664
No 266
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.15 E-value=1.9e-05 Score=79.06 Aligned_cols=65 Identities=20% Similarity=0.055 Sum_probs=58.1
Q ss_pred HHHHhHHHHHHHH----ccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhCCC
Q 013843 367 VSCWLNSAACCLK----LKDYQGAIELCSKVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 367 ~~~~~nla~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~----lg~~~eA~~~~~~al~l~P~ 433 (435)
..+++++|.+|.. .+++++|+.+|++|++.. ++.+++++|.+|.. .+++++|+.+|++|++.+|+
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 4678899999999 899999999999999864 69999999999998 89999999999999998843
No 267
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.14 E-value=8.8e-07 Score=85.80 Aligned_cols=78 Identities=9% Similarity=0.155 Sum_probs=61.8
Q ss_pred EEEEEEecCCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEE
Q 013843 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYY 293 (435)
Q Consensus 214 v~y~~~~~~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~ 293 (435)
+||+|+ .||..|+++ .+.|+.|.+|.+.++|||+.+|.+|++||+..|.++....|+.. -.+|.++.|
T Consensus 169 i~y~g~-~dG~~fd~~---~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~--------~laGk~~~F 236 (392)
T 1t11_A 169 IDFVGS-IDGVEFEGG---KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAE--------NLKGKAAKF 236 (392)
T ss_dssp EEEEEE-SSSSCCTTC---EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCT--------TTSSCEEEE
T ss_pred EEEEEE-ECCEEccCC---CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccC--------CCCCCeEEE
Confidence 355555 377777765 35799999999999999999999999999999999744456532 225789999
Q ss_pred EEEEEEEEec
Q 013843 294 EVEMMDFIKE 303 (435)
Q Consensus 294 ~iel~~~~~~ 303 (435)
.++|..+...
T Consensus 237 ~V~v~~i~~~ 246 (392)
T 1t11_A 237 AIKVNKVEAR 246 (392)
T ss_dssp CCCEEEEEEE
T ss_pred EEEEEEEEcC
Confidence 9999998753
No 268
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.12 E-value=1.2e-05 Score=66.48 Aligned_cols=80 Identities=14% Similarity=0.045 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHh-ccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHH
Q 013843 318 AGRKKEEGNLLFKNG---KYERAGKKYNKAADCV-SEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (435)
Q Consensus 318 a~~~~~~g~~~~~~g---~y~~A~~~y~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 393 (435)
.+..++.|..+.+.+ ++++++.+++..++.. |. ....+++++|..|+++++|.+|+++++++
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~--------------~~rd~lY~LAv~~~kl~~Y~~A~~y~~~l 97 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKE--------------EQRDYVFYLAVGNYRLKEYEKALKYVRGL 97 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHH--------------HHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc--------------chHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 466777888888888 7889999999999875 31 23578999999999999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHH
Q 013843 394 LDCDCHNVKALYRRAQAY 411 (435)
Q Consensus 394 l~~~p~~~~a~~~~a~~~ 411 (435)
|+++|+|..|...+-.+-
T Consensus 98 L~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 98 LQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHCTTCHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHH
Confidence 999999998876655443
No 269
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.12 E-value=1.8e-06 Score=79.48 Aligned_cols=97 Identities=14% Similarity=-0.005 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p 398 (435)
......+..+...|+|++|.+.|..++...|.. . +++.+|.++++.++|++|+.++++++...+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~---------------~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d 166 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSEH---------------L-VAWMKAVVYGAAERWTDVIDQVKSAGKWPD 166 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHH---------------H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCch---------------H-HHHHHHHHHHHcCCHHHHHHHHHHhhccCC
Confidence 455566888999999999999998887654431 2 689999999999999999999998877642
Q ss_pred CC--HHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q 013843 399 HN--VKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (435)
Q Consensus 399 ~~--~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~ 431 (435)
.. ..+++.+|.++..+|++++|+.+|++++.-.
T Consensus 167 ~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 167 KFLAGAAGVAHGVAAANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTST
T ss_pred cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 22 4589999999999999999999999998543
No 270
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.11 E-value=6.8e-05 Score=62.30 Aligned_cols=101 Identities=10% Similarity=0.063 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC--
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD-- 397 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~-- 397 (435)
.+++....++..+.|+.|+-.+..++.+...+.+.-. ......++..+|..++..++|.+|...|++||+..
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~ 95 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKA 95 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 3566677889999999999999999988766554211 23456778999999999999999999999998652
Q ss_pred -CCC----------------------HHHHHHHHHHHHhcccHHHHHHHHHH
Q 013843 398 -CHN----------------------VKALYRRAQAYMEIADLILAELDIKK 426 (435)
Q Consensus 398 -p~~----------------------~~a~~~~a~~~~~lg~~~eA~~~~~~ 426 (435)
+++ .+..|++|.||.+++++++|+..++.
T Consensus 96 l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 96 LSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp C--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 111 26789999999999999999998764
No 271
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.10 E-value=5.1e-05 Score=72.11 Aligned_cols=114 Identities=9% Similarity=-0.017 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHc---CCHHHHHHHHHHHHHHhccCCC-----------------CChHHHHHHH-HH-----------HH
Q 013843 320 RKKEEGNLLFKN---GKYERAGKKYNKAADCVSEDGS-----------------FVDDEQKLVK-SL-----------RV 367 (435)
Q Consensus 320 ~~~~~g~~~~~~---g~y~~A~~~y~~al~~~~~~~~-----------------~~~~~~~~~~-~~-----------~~ 367 (435)
.+.-+|..++.. .++.+|+.+|++|++++|.... ........+. .+ ..
T Consensus 198 dl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a 277 (372)
T 3ly7_A 198 TNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLS 277 (372)
T ss_dssp HHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCH
Confidence 333444444443 3468899999999999886321 1111111111 00 11
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.+|.-+|..++..|++++|+..+++|+.++| +..+|..+|.++...|++++|++.|.+|+.++|..
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 2344466677778999999999999999997 57888999999999999999999999999999964
No 272
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.09 E-value=8e-06 Score=65.01 Aligned_cols=88 Identities=16% Similarity=0.169 Sum_probs=70.9
Q ss_pred CHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHH---HHHHHHHHHhhC-C-CCHHHHHHH
Q 013843 333 KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQG---AIELCSKVLDCD-C-HNVKALYRR 407 (435)
Q Consensus 333 ~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~a~~~~ 407 (435)
....+.+.|.+.+...+.. ..+.+++|.|+.+..+... ++..+...+..+ | ....++|.+
T Consensus 16 ~l~~~~~~y~~e~~~~~~s---------------~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~L 80 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVS---------------KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYL 80 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCC---------------HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCc---------------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 3455666777776643311 3668899999999887666 999999988877 5 567899999
Q ss_pred HHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 408 AQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 408 a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
|.+++++|+|++|+++++.+|+++|+|+
T Consensus 81 Avg~yklg~Y~~A~~~~~~lL~~eP~n~ 108 (126)
T 1nzn_A 81 AVGNYRLKEYEKALKYVRGLLQTEPQNN 108 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999883
No 273
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.02 E-value=2.5e-05 Score=71.30 Aligned_cols=88 Identities=11% Similarity=0.040 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHc-----cCHHHHHHHHHHHHhhCCCC-HHHHHH
Q 013843 333 KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL-----KDYQGAIELCSKVLDCDCHN-VKALYR 406 (435)
Q Consensus 333 ~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~a~~~ 406 (435)
....|...+++|++++|... ...+|..+|..|.+. |+.++|..+|++||+++|+. ..+++.
T Consensus 178 ~l~~A~a~lerAleLDP~~~-------------~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~ 244 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQ-------------EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHIT 244 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHH-------------HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcc-------------cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHH
Confidence 35678888899999887622 346799999999996 99999999999999999975 999999
Q ss_pred HHHHHHh-cccHHHHHHHHHHHHHhCCC
Q 013843 407 RAQAYME-IADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 407 ~a~~~~~-lg~~~eA~~~~~~al~l~P~ 433 (435)
.|..+.. ++++++|.+.+++|+..+|.
T Consensus 245 YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 245 YADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 9999988 59999999999999999886
No 274
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.00 E-value=6.9e-05 Score=74.87 Aligned_cols=93 Identities=18% Similarity=0.053 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH----ccCHHHHHHH
Q 013843 318 AGRKKEEGNLLFK----NGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK----LKDYQGAIEL 389 (435)
Q Consensus 318 a~~~~~~g~~~~~----~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----~~~~~~A~~~ 389 (435)
+..+...|..++. .+++++|+..|+++++... ..+++++|.+|.. .+++++|+.+
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~~-----------------~~a~~~Lg~~y~~g~g~~~~~~~A~~~ 101 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGY-----------------TPAEYVLGLRYMNGEGVPQDYAQAVIW 101 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC-----------------HHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 4566777777777 7888888888888876421 1334445555544 4455555555
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHh----cccHHHHHHHHHHHHH
Q 013843 390 CSKVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIE 429 (435)
Q Consensus 390 ~~~al~~~p~~~~a~~~~a~~~~~----lg~~~eA~~~~~~al~ 429 (435)
|+++.+. .++.+++++|.+|.. .+++++|+.+|+++.+
T Consensus 102 ~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 102 YKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 5554443 244444445544444 4444455544444443
No 275
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.95 E-value=2.7e-05 Score=76.01 Aligned_cols=121 Identities=16% Similarity=0.154 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCC------------------ChHHHHH-H----------
Q 013843 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF------------------VDDEQKL-V---------- 362 (435)
Q Consensus 312 ~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~------------------~~~~~~~-~---------- 362 (435)
.........+.+.|..|++.|+|++|+..|.+++.+.+..... ..+.... .
T Consensus 49 ~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 49 KRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 3444566778899999999999999999999988865542211 0111110 0
Q ss_pred --HHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 363 --KSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 363 --~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
..+...++.++|.+|..+|+|.+|+..+.+++.. .+....++..++.+|..+|+|++|+..|++++.+.+
T Consensus 129 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 129 KRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp SCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 1123567899999999999999999999999876 233468899999999999999999999999998754
No 276
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.94 E-value=3.1e-05 Score=76.83 Aligned_cols=93 Identities=15% Similarity=-0.019 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHc----cCHHHHHHHHHH
Q 013843 320 RKKEEGNLLFKNG---KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL----KDYQGAIELCSK 392 (435)
Q Consensus 320 ~~~~~g~~~~~~g---~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~----~~~~~A~~~~~~ 392 (435)
.+...|..+...| ++++|+..|+++++..+... ..++++|.+|... +++++|+.+|++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a---------------~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~ 242 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTA---------------QRVDSVARVLGDATLGTPDEKTAQALLEK 242 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCH---------------HHHHHHHHHHTCGGGSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHH---------------HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 5677888899999 99999999999998765432 2235566665444 456666666666
Q ss_pred HHhhCCCCHHHHHHHHHH-H--HhcccHHHHHHHHHHHHHh
Q 013843 393 VLDCDCHNVKALYRRAQA-Y--MEIADLILAELDIKKAIEA 430 (435)
Q Consensus 393 al~~~p~~~~a~~~~a~~-~--~~lg~~~eA~~~~~~al~l 430 (435)
+. |.++.+++++|.+ + ...+++++|+.+|+++.+.
T Consensus 243 aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 243 IA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp HG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred Hc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 55 5566666666665 3 3455666666666665543
No 277
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.93 E-value=2.4e-05 Score=76.72 Aligned_cols=79 Identities=11% Similarity=0.071 Sum_probs=64.4
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeeEEeCCCccccchHHHhccccCCcEEEEEEEcCCCCCCCCCCCCCCCC
Q 013843 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (435)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~g~~~~~s~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~~yg~~~~~~i~~ 140 (435)
.++.||.|+|+|+++ .||..|+++.. .++.+.+|.+. + |+++|.||++|++.+|++.+ +
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF---------------a 212 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY---------------E 212 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE---------------T
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee---------------C
Confidence 578999999999988 49999998654 67888888887 4 99999999999999994433 3
Q ss_pred CCeEEEEEEEeeeeeeeccC
Q 013843 141 NSVVQFEVELVSWITVVDLS 160 (435)
Q Consensus 141 ~~~l~~~v~l~~~~~~~d~~ 160 (435)
|.+..|.|++..++...-+.
T Consensus 213 Gk~a~F~VtV~~Ik~~~lPE 232 (433)
T 3gty_X 213 GKKYTYKLEVEEVYKRTLPE 232 (433)
T ss_dssp TEEEEEEEEEEEEEEECCCC
T ss_pred CCeEEEEEEEEEEEEecCCc
Confidence 57899999999987554433
No 278
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.92 E-value=5.6e-05 Score=73.72 Aligned_cols=104 Identities=11% Similarity=-0.033 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+...|..++..|+|.+|+..+.+++......... .....++++++.+|..+++|.+|...+++++...
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDK---------PSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCS---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccc---------hhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 5567789999999999999999999999887654332 2346789999999999999999999999999874
Q ss_pred C---CC----HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 398 C---HN----VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 398 p---~~----~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
+ .. ...+...|..+...++|++|..+|.++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 206 NSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred hcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3 22 356778899999999999999999999875
No 279
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.92 E-value=3.3e-05 Score=84.36 Aligned_cols=92 Identities=15% Similarity=0.179 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC-
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC- 398 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p- 398 (435)
.+...|+.++..|+|++|+.+|.+|- .|..+|.||.++|+|++|++.+++|...++
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~-----------------------ny~rLA~tLvkLge~q~AIEaarKA~n~~aW 1253 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS-----------------------NFGRLASTLVHLGEYQAAVDGARKANSTRTW 1253 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh-----------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHH
Confidence 56679999999999999999999962 178999999999999999999999855443
Q ss_pred ------------------------CCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 399 ------------------------HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 399 ------------------------~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
.++..+..++..|..+|.|++|+..|+++|.++|.+
T Consensus 1254 kev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH 1313 (1630)
T 1xi4_A 1254 KEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH 1313 (1630)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhH
Confidence 244556678888999999999999999999999764
No 280
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.88 E-value=2.2e-05 Score=76.61 Aligned_cols=31 Identities=10% Similarity=0.001 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 404 LYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 404 ~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+..+...|..+|++++|+..|+++|.+++.+
T Consensus 210 l~~lv~~Yek~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 210 LEELINYYQDRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHH
Confidence 3345567888888888888888888888653
No 281
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.86 E-value=5.5e-05 Score=57.33 Aligned_cols=69 Identities=16% Similarity=0.076 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 318 AGRKKEEGNLLFKNGK---YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~---y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
+..+...|..++..++ .++|..+++++|.++|.+. .+++.+|..+++.|+|++|+.++++++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~---------------rA~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNE---------------AALSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4567778888876555 7999999999999999874 668899999999999999999999999
Q ss_pred hhCCCCH
Q 013843 395 DCDCHNV 401 (435)
Q Consensus 395 ~~~p~~~ 401 (435)
+.+|..+
T Consensus 71 ~~~p~~~ 77 (93)
T 3bee_A 71 DSNDPNL 77 (93)
T ss_dssp TCCCTTC
T ss_pred hhCCCCc
Confidence 9999843
No 282
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.83 E-value=6e-05 Score=61.62 Aligned_cols=78 Identities=17% Similarity=-0.002 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 013843 332 GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAY 411 (435)
Q Consensus 332 g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~ 411 (435)
+++++|+..|+++.+..... ++ +|.+|...+.+++|+.+++++.+. .++.+++++|.+|
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~-----------------a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y 67 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMF-----------------GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTT-----------------HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHh-----------------hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHH
Confidence 47899999999999875221 13 999999999999999999999998 6899999999999
Q ss_pred Hh----cccHHHHHHHHHHHHHh
Q 013843 412 ME----IADLILAELDIKKAIEA 430 (435)
Q Consensus 412 ~~----lg~~~eA~~~~~~al~l 430 (435)
.. .+++++|+.+|++|.+.
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HcCCCCCccHHHHHHHHHHHHcC
Confidence 99 89999999999999876
No 283
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.76 E-value=1.8e-05 Score=78.60 Aligned_cols=91 Identities=19% Similarity=0.107 Sum_probs=54.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCH---HHHHHHHHHHHhhCC
Q 013843 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDY---QGAIELCSKVLDCDC 398 (435)
Q Consensus 322 ~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~---~~A~~~~~~al~~~p 398 (435)
...|..+++.|++++|+..|+++++.. +. .+++++|.+|...|++ ++|+..|+++++.
T Consensus 7 ~~la~~~~~~g~~~~A~~~~~~aa~~g--~~---------------~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~-- 67 (452)
T 3e4b_A 7 QRLANEALKRGDTVTAQQNYQQLAELG--YS---------------EAQVGLADIQVGTRDPAQIKQAEATYRAAADT-- 67 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT--CC---------------TGGGTCC---------------------------
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCC--CH---------------HHHHHHHHHHHccCCCCCHHHHHHHHHHHHhC--
Confidence 457889999999999999999998763 22 3488999999998888 8999999999976
Q ss_pred CCHHHHHHHHHHHHhcc-----cHHHHHHHHHHHHHhCC
Q 013843 399 HNVKALYRRAQAYMEIA-----DLILAELDIKKAIEADP 432 (435)
Q Consensus 399 ~~~~a~~~~a~~~~~lg-----~~~eA~~~~~~al~l~P 432 (435)
++.+++++|.++...+ ++++|+.+|+++++..+
T Consensus 68 -~~~A~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~~g~ 105 (452)
T 3e4b_A 68 -SPRAQARLGRLLAAKPGATEAEHHEAESLLKKAFANGE 105 (452)
T ss_dssp ----CHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHCCC
Confidence 7889999999777666 88999999999998654
No 284
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.72 E-value=9.4e-05 Score=72.72 Aligned_cols=94 Identities=10% Similarity=-0.099 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
...+..+.+.|..|..+|+|++|+.+|+++|.+........ +...+..++|+|.+|..+|+|++|+..+++|+
T Consensus 326 ~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 326 IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 45677888899999999999999999999999764321111 12356779999999999999999999999999
Q ss_pred hh-----CCCCH---HHHHHHHHHHHhcc
Q 013843 395 DC-----DCHNV---KALYRRAQAYMEIA 415 (435)
Q Consensus 395 ~~-----~p~~~---~a~~~~a~~~~~lg 415 (435)
++ .|+++ ..+.+++.++..++
T Consensus 399 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 399 DIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 76 45554 55566777766543
No 285
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.71 E-value=0.00011 Score=58.56 Aligned_cols=69 Identities=13% Similarity=0.184 Sum_probs=58.1
Q ss_pred HHHHhHHHHHHHHccC---HHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 367 VSCWLNSAACCLKLKD---YQGAIELCSKVLDCDCH-NVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~---~~~A~~~~~~al~~~p~-~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
..+.+|.|.|+.+.++ ..+++..+...++.+|. ....+|.+|.+++++|+|++|+++.+.+|+++|+|+
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~ 112 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 112 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCH
Confidence 3567888888888665 45788889888888884 478899999999999999999999999999999873
No 286
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.69 E-value=7.8e-05 Score=69.44 Aligned_cols=93 Identities=11% Similarity=-0.014 Sum_probs=75.2
Q ss_pred HHHHHHcC--CHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh------
Q 013843 325 GNLLFKNG--KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC------ 396 (435)
Q Consensus 325 g~~~~~~g--~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~------ 396 (435)
|...+..| ++..|...|+++....|... ...+++| |++++|+|++|...++.+++.
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p~~~-------------~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~ 246 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFPTWK-------------TQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQ 246 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSCSHH-------------HHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTT
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCCCcc-------------cHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccc
Confidence 43345445 99999999999876654300 1233555 899999999999999988876
Q ss_pred ----CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 397 ----DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 397 ----~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
+|+++.++.++..+...+|+ +|.+.+.++.+++|+++
T Consensus 247 k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 247 KENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp CHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred cccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 58999999999999999998 89999999999999874
No 287
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.67 E-value=0.00019 Score=57.93 Aligned_cols=69 Identities=13% Similarity=0.184 Sum_probs=58.9
Q ss_pred HHHHhHHHHHHHHccC---HHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCC
Q 013843 367 VSCWLNSAACCLKLKD---YQGAIELCSKVLDCDCH-NVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~---~~~A~~~~~~al~~~p~-~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n~ 435 (435)
..+.+|.|.|+.+..+ -.+++..++..+..+|. ...++|.+|.+++++|+|++|+++.+.+|+++|+|+
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~ 111 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 111 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcH
Confidence 3567888888888765 45788899999988884 568899999999999999999999999999999883
No 288
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.65 E-value=0.00018 Score=78.76 Aligned_cols=107 Identities=14% Similarity=0.027 Sum_probs=81.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCC--ChHHHHHHH-----HHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF--VDDEQKLVK-----SLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 322 ~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~--~~~~~~~~~-----~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
.+.|..+...|.|++|...|+++-......... .-..+++.. -....+|+++|.++..+|+|++|++.|.+|
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA- 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA- 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-
Confidence 345899999999999999999974322110000 001111111 123577999999999999999999999886
Q ss_pred hhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 395 ~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
+++.+|++.|.++.++|+|++|+++|.+|.+.+++
T Consensus 1132 ----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 88999999999999999999999999999988754
No 289
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.62 E-value=0.0014 Score=63.38 Aligned_cols=114 Identities=12% Similarity=-0.032 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCC-------CChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHH
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGS-------FVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIE 388 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~-------~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~ 388 (435)
.....+...|......++.+.|...|.+|+.+.....- +...+...+.+++..+...++..++..|++.+|+.
T Consensus 113 ~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~ 192 (388)
T 2ff4_A 113 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIA 192 (388)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 44566677777778889999999999999998754321 11244567888888899999999999999999999
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 389 LCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 389 ~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
.+.+++..+|-+..+|..+-.+|...|+..+|++.|+++-+
T Consensus 193 ~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 193 ELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988754
No 290
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.53 E-value=0.00027 Score=69.45 Aligned_cols=80 Identities=13% Similarity=-0.010 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..+..+.++|..|..+|+|++|+.+|+++|++........ +...+..++|+|.+|..+|+|++|+..|++|++
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-------SLNVASMWLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 4566788899999999999999999999999864322111 123467799999999999999999999999998
Q ss_pred h-----CCCCHH
Q 013843 396 C-----DCHNVK 402 (435)
Q Consensus 396 ~-----~p~~~~ 402 (435)
+ .|+++.
T Consensus 411 i~~~~lG~~Hp~ 422 (433)
T 3qww_A 411 IMEVAHGKDHPY 422 (433)
T ss_dssp HHHHHTCTTCHH
T ss_pred HHHHHcCCCChH
Confidence 6 466653
No 291
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.26 E-value=0.0018 Score=60.29 Aligned_cols=110 Identities=8% Similarity=-0.031 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCC---------------CChHHHHHH---HHHH-------HHHHhHHH
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGS---------------FVDDEQKLV---KSLR-------VSCWLNSA 374 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~---------------~~~~~~~~~---~~~~-------~~~~~nla 374 (435)
.+.-.|..+...|++++|++.+.+++...+.... ..+...+.+ +... -.+..+++
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHH
Confidence 3457888899999999999999998765541110 001111111 1111 13344444
Q ss_pred HH--HHHcc--CHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 375 AC--CLKLK--DYQGAIELCSKVLDCDCH--NVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 375 ~~--~~~~~--~~~~A~~~~~~al~~~p~--~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
.. .+..| ++++|+..|+++.+..|+ ....+++ +++++|++++|.+.+++++++.|
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p 242 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYY 242 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcc
Confidence 33 44444 677777777776666665 2334444 67777777777777776666554
No 292
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.26 E-value=0.0017 Score=51.47 Aligned_cols=78 Identities=15% Similarity=0.047 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHcCCHHH---HHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 320 RKKEEGNLLFKNGKYER---AGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~---A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
..++.|-.+.+..+-.. ++.++...++... ...+..+++.+|..++++|+|.+|+.+++.+|+.
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~-------------p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC-------------cchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 34444555555554433 6666666554320 0235678999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHH
Q 013843 397 DCHNVKALYRRAQA 410 (435)
Q Consensus 397 ~p~~~~a~~~~a~~ 410 (435)
+|+|..|.-.+..+
T Consensus 104 eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 104 EPQNNQAKELERLI 117 (126)
T ss_dssp CTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 99999887655444
No 293
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.25 E-value=0.0038 Score=49.72 Aligned_cols=79 Identities=14% Similarity=0.083 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 320 RKKEEGNLLFKNG---KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 320 ~~~~~g~~~~~~g---~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
..++.|-.+.+.. +..+++.++...++..|. .+..+++.+|..+.++|+|.+|..+++.+|+.
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~--------------~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES--------------RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGG--------------GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc--------------hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 3444555565554 345688888887765432 24678999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH
Q 013843 397 DCHNVKALYRRAQAYM 412 (435)
Q Consensus 397 ~p~~~~a~~~~a~~~~ 412 (435)
+|+|..|.-.+..+--
T Consensus 108 eP~N~QA~~Lk~~Ie~ 123 (134)
T 3o48_A 108 ERNNKQVGALKSMVED 123 (134)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 9999988765554443
No 294
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.21 E-value=0.0058 Score=49.30 Aligned_cols=78 Identities=14% Similarity=0.112 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 319 GRKKEEGNLLFKNGK---YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~---y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
+..++.|-.+.+..+ -.+++.+++..++..|.. +..+++.+|..++++++|.+|..+++..|+
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~--------------~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR--------------RRECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST--------------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc--------------hhHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 344555666666554 346788888877744321 457899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHH
Q 013843 396 CDCHNVKALYRRAQA 410 (435)
Q Consensus 396 ~~p~~~~a~~~~a~~ 410 (435)
.+|+|..|.-.+..+
T Consensus 106 ~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 106 HERNNKQVGALKSMV 120 (144)
T ss_dssp TCCCCHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHH
Confidence 999998876554443
No 295
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.00 E-value=0.0038 Score=51.81 Aligned_cols=95 Identities=17% Similarity=0.111 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChH--------HHH--HHHHHHHHHHhHHHHHHHHccCHHH
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDD--------EQK--LVKSLRVSCWLNSAACCLKLKDYQG 385 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~--------~~~--~~~~~~~~~~~nla~~~~~~~~~~~ 385 (435)
..++.+.-.|+.+|.+++|.+|...|++||............ -.. ....--..+.+.+|.||.+++++.+
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHH
Confidence 456778889999999999999999999999876532111000 000 0000012567889999999999999
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHH
Q 013843 386 AIELCSKVLDCDCHNVKALYRRAQAY 411 (435)
Q Consensus 386 A~~~~~~al~~~p~~~~a~~~~a~~~ 411 (435)
|+...+..-. .-..++....+|+.|
T Consensus 141 Ai~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 141 AIAILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred HHHHHhcCCc-hhcCHHHHHHHHHHh
Confidence 9987654322 224677777777655
No 296
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.68 E-value=0.0026 Score=62.05 Aligned_cols=112 Identities=11% Similarity=-0.036 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHH-------------------HHHHh
Q 013843 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLR-------------------VSCWL 371 (435)
Q Consensus 311 ~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~ 371 (435)
.......+..+...|..+++.|+|+.|++.|+++... ..|+..-..+ +.-+.
T Consensus 141 A~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~~---------~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~ 211 (449)
T 1b89_A 141 AKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANST---------RTWKEVCFACVDGKEFRLAQMCGLHIVVHADELE 211 (449)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTCH---------HHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcCCc---------hhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHH
Confidence 4445667778889999999999999999999999322 1111100000 01122
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH--hcccHHHHHHHHHHHHHhC
Q 013843 372 NSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYM--EIADLILAELDIKKAIEAD 431 (435)
Q Consensus 372 nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~--~lg~~~eA~~~~~~al~l~ 431 (435)
.+..+|.+.|+|++|+..++++|.+++.+...+..+|.+|. +.++..++++.|...+.+.
T Consensus 212 ~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~ 273 (449)
T 1b89_A 212 ELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIP 273 (449)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCc
Confidence 45578999999999999999999999999999999998886 4567778877776555443
No 297
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.58 E-value=0.0032 Score=57.48 Aligned_cols=53 Identities=8% Similarity=-0.023 Sum_probs=48.8
Q ss_pred CHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHhCCCC
Q 013843 382 DYQGAIELCSKVLDCDCH--NVKALYRRAQAYMEI-----ADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 382 ~~~~A~~~~~~al~~~p~--~~~a~~~~a~~~~~l-----g~~~eA~~~~~~al~l~P~n 434 (435)
....|...+++|+++||+ +..+|..+|..|..+ |+.++|.++|++||+++|++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC
Confidence 468899999999999999 567999999999996 99999999999999999974
No 298
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.45 E-value=0.014 Score=55.31 Aligned_cols=65 Identities=8% Similarity=-0.062 Sum_probs=55.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCH
Q 013843 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNV 401 (435)
Q Consensus 322 ~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~ 401 (435)
...+..++..|++++|+..+++|+.+++. ...|..+|.++...|++++|++.|.+|+.++|...
T Consensus 281 ~alal~~l~~gd~d~A~~~l~rAl~Ln~s----------------~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 281 QIKAVSALVKGKTDESYQAINTGIDLEMS----------------WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhcCCC----------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 34566677789999999999999999742 24577889999999999999999999999999775
Q ss_pred H
Q 013843 402 K 402 (435)
Q Consensus 402 ~ 402 (435)
.
T Consensus 345 t 345 (372)
T 3ly7_A 345 T 345 (372)
T ss_dssp H
T ss_pred h
Confidence 3
No 299
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.34 E-value=0.03 Score=45.56 Aligned_cols=91 Identities=11% Similarity=-0.004 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhc
Q 013843 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEI 414 (435)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~l 414 (435)
++-+..|++|+...|... ...+...+-++.+.|.- ..+++.++|.+.|+.++.+....++.|...|+--.+.
T Consensus 36 ~rlrd~YerAia~~Pp~k-------~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRq 107 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDK-------YGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQ 107 (161)
T ss_dssp HHHHHHHHHHHHHSCGGG-------GTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCccc-------cccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 777889999999887642 22345566677777754 6779999999999999999888899999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCC
Q 013843 415 ADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 415 g~~~eA~~~~~~al~l~P~ 433 (435)
|+...|++.+.+|+.+.|.
T Consensus 108 gnl~kARkILg~AiG~~~k 126 (161)
T 4h7y_A 108 GNVKKSKQLLQKAVERGAV 126 (161)
T ss_dssp TCHHHHHHHHHHHHHTTCB
T ss_pred ccHHHHHHHHHHHhccCCC
Confidence 9999999999999998885
No 300
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.051 Score=56.61 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=53.5
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHH
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKA 427 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~a 427 (435)
.++.-.|.-++..++|+-|+..+++|....|.....|++++.+|..+++|+.|+-.++.+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 345555666778999999999999999999999999999999999999999999887765
No 301
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.91 E-value=0.11 Score=49.87 Aligned_cols=98 Identities=14% Similarity=-0.020 Sum_probs=79.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC---CC
Q 013843 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD---CH 399 (435)
Q Consensus 323 ~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~---p~ 399 (435)
..|..|+..|+|.+|+..+.+.++....... ..+...++......|..++++.++...+.+|.... +.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd---------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~ 174 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD---------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYC 174 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC---------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCC
Confidence 6789999999999999999999998765321 25677888999999999999999999999997653 12
Q ss_pred CH----HHHHHHHHHHH-hcccHHHHHHHHHHHHH
Q 013843 400 NV----KALYRRAQAYM-EIADLILAELDIKKAIE 429 (435)
Q Consensus 400 ~~----~a~~~~a~~~~-~lg~~~eA~~~~~~al~ 429 (435)
++ .....-|..++ ..++|.+|..+|-.+++
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 22 33455688888 89999999999998864
No 302
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.83 E-value=0.058 Score=55.93 Aligned_cols=98 Identities=9% Similarity=-0.026 Sum_probs=70.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHcc-CHHHHHHHHHHHHhhCCC
Q 013843 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK-DYQGAIELCSKVLDCDCH 399 (435)
Q Consensus 321 ~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~-~~~~A~~~~~~al~~~p~ 399 (435)
+...++...+.++.+.|...|.+|+...+... ..+|...|..-.+.+ +++.|...|+++|+..|+
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~--------------~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~ 502 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVT--------------PDIYLENAYIEYHISKDTKTACKVLELGLKYFAT 502 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSC--------------THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCC--------------hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCC
Confidence 44445555667888999999999988733221 133555555555544 478888888888888888
Q ss_pred CHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 400 ~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
++..+...+......|+.+.|+..|++|+...|
T Consensus 503 ~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 503 DGEYINKYLDFLIYVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Confidence 888777777777778888888888888887766
No 303
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.64 E-value=0.12 Score=53.62 Aligned_cols=113 Identities=9% Similarity=-0.034 Sum_probs=82.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhcc--------CCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHH
Q 013843 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSE--------DGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSK 392 (435)
Q Consensus 321 ~~~~g~~~~~~g~y~~A~~~y~~al~~~~~--------~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 392 (435)
+...+....+.|++++|...|++++...+. .+. +++....+..-...+|...+....+.++.+.|...+.+
T Consensus 381 wl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~-~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~ 459 (679)
T 4e6h_A 381 AFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPT-NESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGK 459 (679)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCc-chhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344555666788999999999999886421 111 11222222333445677788888888999999999999
Q ss_pred HHhh-CCCCHHHHHHHHHHHHhccc-HHHHHHHHHHHHHhCCCC
Q 013843 393 VLDC-DCHNVKALYRRAQAYMEIAD-LILAELDIKKAIEADPQN 434 (435)
Q Consensus 393 al~~-~p~~~~a~~~~a~~~~~lg~-~~eA~~~~~~al~l~P~n 434 (435)
|++. .+...+.|...|......++ ++.|+..|+++++..|++
T Consensus 460 A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~ 503 (679)
T 4e6h_A 460 CRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATD 503 (679)
T ss_dssp HHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCc
Confidence 9998 55567788777777777654 899999999999998875
No 304
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.44 E-value=0.1 Score=43.15 Aligned_cols=89 Identities=17% Similarity=0.105 Sum_probs=65.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh--hC----
Q 013843 324 EGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD--CD---- 397 (435)
Q Consensus 324 ~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~--~~---- 397 (435)
.+..+|-.|.|.+|+-++.+ ... +...+.-+.||.++++|..|+.+.+..|+ .+
T Consensus 39 ~~I~LyyngEY~R~Lf~L~~-------lNT-------------~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~ 98 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLHK-------LNT-------------CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPD 98 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-------CCB-------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCC
T ss_pred hhhhhhhcchHhHHHHHHHh-------cch-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcc
Confidence 35556677777766654322 111 34466788999999999999999999993 32
Q ss_pred -----------CCCHHH-HHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q 013843 398 -----------CHNVKA-LYRRAQAYMEIADLILAELDIKKAIEADP 432 (435)
Q Consensus 398 -----------p~~~~a-~~~~a~~~~~lg~~~eA~~~~~~al~l~P 432 (435)
|.+.+. +..+|..+.++|+-+||+.+|.+....+|
T Consensus 99 ~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 99 VDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp CCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred cccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 333343 44579999999999999999999988776
No 305
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.19 E-value=0.062 Score=52.48 Aligned_cols=99 Identities=12% Similarity=0.023 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC-
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC- 398 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p- 398 (435)
.+...|..+++.|+++.|++.|.++......... +..+++++..+++..++|..+..++.++..+-.
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~------------kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~ 200 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGA------------KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK 200 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCS------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHH------------HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc
Confidence 3557899999999999999999999887754422 467788899999999999999999999976521
Q ss_pred -CC----HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 399 -HN----VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 399 -~~----~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
.+ .+.....|.++...++|.+|-..|..++.-
T Consensus 201 ~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 201 GGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp CCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 12 134455677888899999999999887654
No 306
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=95.02 E-value=0.23 Score=45.75 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHc--cCH-----HHHHHH
Q 013843 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL--KDY-----QGAIEL 389 (435)
Q Consensus 317 ~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--~~~-----~~A~~~ 389 (435)
......+.|..++..|+|.+|+..|+.+|...+-....+.++..+++++...+.-.+-.+.+++ ++. +.....
T Consensus 101 ~l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~ 180 (320)
T 3mkr_B 101 DLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRI 180 (320)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHH
Confidence 3444678899999999999999999999999887665566666777776666544433333332 111 222222
Q ss_pred HHHHH-----hhCCCCHHHHHHHHH-HHHhcccHHHHHHHHHHHHHhCCC
Q 013843 390 CSKVL-----DCDCHNVKALYRRAQ-AYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 390 ~~~al-----~~~p~~~~a~~~~a~-~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
++-|. ++.|.+...-.|.|. ..++.++|.-|....++.|++.|+
T Consensus 181 lELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 181 CEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 22221 223433333333333 345778888888888888888774
No 307
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=94.89 E-value=0.059 Score=52.62 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=46.0
Q ss_pred CCcEEeecCCCCCCCeEEEcCCCCcchHHHHHHcccccCcEEEEEEcCCCCCCccccccccccCCCCCeEEEEEEEEEEE
Q 013843 222 DGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (435)
Q Consensus 222 ~g~~f~~~~~~~~~p~~~~lg~~~v~~g~~~~l~~m~~Ge~~~i~~~~~~~yg~~~~~~~~~~ip~~~~l~~~iel~~~~ 301 (435)
||..|+++ .+.++.|.+|.+. + |+.+|.+|+.||...|.+.. +|....|.+.+..+.
T Consensus 170 dG~~~~~~---~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF-----------------aGk~a~F~VtV~~Ik 226 (433)
T 3gty_X 170 EEGKKLTS---REYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY-----------------EGKKYTYKLEVEEVY 226 (433)
T ss_dssp TTSCEEEE---EEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE-----------------TTEEEEEEEEEEEEE
T ss_pred CCEECcCC---CCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee-----------------CCCeEEEEEEEEEEE
Confidence 66666654 2367888888877 3 99999999999999998842 356788999999987
Q ss_pred ec
Q 013843 302 KE 303 (435)
Q Consensus 302 ~~ 303 (435)
..
T Consensus 227 ~~ 228 (433)
T 3gty_X 227 KR 228 (433)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 308
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=94.88 E-value=0.15 Score=46.87 Aligned_cols=119 Identities=12% Similarity=0.026 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
+.......+.|..++..|+|.+|+..|+.+|...+-....+.++..+++++...+.-.+-.+.+++.+-+-.-+.-.+.+
T Consensus 111 l~~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~l 190 (325)
T 3mv2_A 111 LDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRML 190 (325)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 34444567789999999999999999999999987655445566666666665554333222222211000001112222
Q ss_pred h---------hCCCCHHHHHHHHH-HHHhcccHHHHHHHHHHHHHhCCC
Q 013843 395 D---------CDCHNVKALYRRAQ-AYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 395 ~---------~~p~~~~a~~~~a~-~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
+ +.|.+...-.|.|. ..++.++|.-|....++.|++.|+
T Consensus 191 ELAAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 239 (325)
T 3mv2_A 191 ELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISS 239 (325)
T ss_dssp HHHHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred HHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 2 23333222233333 335677777777777777777764
No 309
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.43 E-value=0.84 Score=44.61 Aligned_cols=106 Identities=13% Similarity=0.065 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
++++-....+..++..|+|.+|.........-.-... + ...+..+++.....|+..++|.+|...++++..
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~--~-------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~ 205 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSM--E-------MSEKIQFILEQMELSILKGDYSQATVLSRKILK 205 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSS--C-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcc--c-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4566677889999999999999999988764332211 1 234567788888999999999999999999753
Q ss_pred ---hCCCCH----HHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 396 ---CDCHNV----KALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 396 ---~~p~~~----~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
-.+..+ ..+...|..+...++|.+|-.+|..++..
T Consensus 206 ~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 206 KTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 233332 44566788999999999999999988753
No 310
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=93.53 E-value=0.65 Score=46.08 Aligned_cols=113 Identities=11% Similarity=-0.046 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCh--------HHH-HHH----------------HHHHHHHHhHHH
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD--------DEQ-KLV----------------KSLRVSCWLNSA 374 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~--------~~~-~~~----------------~~~~~~~~~nla 374 (435)
.+...+..+.+.|+.+.|...|.+|+.. |.+....- ++. ..+ ......+|...+
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~ 293 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHL 293 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHH
Confidence 4555667777889999999999999999 76532110 000 000 011224456666
Q ss_pred HHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHhCCCC
Q 013843 375 ACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIA-DLILAELDIKKAIEADPQN 434 (435)
Q Consensus 375 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg-~~~eA~~~~~~al~l~P~n 434 (435)
....+.++.+.|...+.+| ...+.....|...|.....++ +.+.|+..|+++++.-|++
T Consensus 294 ~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~ 353 (493)
T 2uy1_A 294 NYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDS 353 (493)
T ss_dssp HHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTC
T ss_pred HHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCC
Confidence 6666788899999999999 443335566766676666666 5999999999999987764
No 311
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.38 E-value=0.77 Score=41.20 Aligned_cols=95 Identities=12% Similarity=-0.061 Sum_probs=74.4
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHH-
Q 013843 325 GNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKA- 403 (435)
Q Consensus 325 g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a- 403 (435)
...+++.|+.+.|+......++..|.+. .....+...+.-.|+|++|...++.+.+++|.....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da---------------~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a 68 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDA---------------SLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 68 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCH---------------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHH
Confidence 3567899999999999999999988774 334455566677899999999999999999986422
Q ss_pred ----------------------------------HHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 404 ----------------------------------LYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 404 ----------------------------------~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
....+......|+.++|.+.-.+|++..|..
T Consensus 69 ~~yr~lI~aE~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~ 133 (273)
T 1zbp_A 69 SQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 133 (273)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCccc
Confidence 2334555666788999999999998887753
No 312
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.22 E-value=0.2 Score=52.24 Aligned_cols=59 Identities=24% Similarity=0.372 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHH
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 393 (435)
-+..++..+.++|+|+.|+..-++|+...|.+. .+|+.||.||.++++|+.|+-..+.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF---------------~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSF---------------ESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhh---------------HHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 456678888999999999999999999998765 66999999999999999999776655
No 313
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.10 E-value=0.38 Score=47.70 Aligned_cols=66 Identities=9% Similarity=-0.023 Sum_probs=60.5
Q ss_pred HHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 365 LRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 365 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
....++.++|........+..|..+|.+|+.+.|++...|..+|......++.-+|+-+|-++|..
T Consensus 150 ~~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 150 ICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 455678889999888899999999999999999999999999999999999999999999999864
No 314
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=92.68 E-value=2 Score=42.62 Aligned_cols=96 Identities=8% Similarity=-0.008 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC-C
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD-C 398 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~-p 398 (435)
.+...-..+.+.|++++|.+.|.+..+..- .++ ...|+.+-..|.+.|++++|...+++..+.. .
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~-~Pd-------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~ 172 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGI-QPR-------------LRSYGPALFGFCRKGDADKAYEVDAHMVESEVV 172 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTC-CCC-------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCC-CCc-------------cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 344556778899999999999998776421 111 3557778888999999999999999998763 2
Q ss_pred CCHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 399 HNVKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 399 ~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
.+...|..+-.+|.+.|+.++|.+.|++.-+
T Consensus 173 Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 173 PEEPELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 3677888899999999999999999988654
No 315
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=92.60 E-value=0.32 Score=43.62 Aligned_cols=58 Identities=16% Similarity=0.108 Sum_probs=55.0
Q ss_pred HHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 376 CCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 376 ~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
..++.++.++|+..+...++.+|.|++.-..+-+.+.-.|+|+.|...++.+.+++|+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGG
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCch
Confidence 4578899999999999999999999999999999999999999999999999999996
No 316
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=92.31 E-value=0.38 Score=34.95 Aligned_cols=40 Identities=28% Similarity=0.152 Sum_probs=34.8
Q ss_pred CChHH-HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 013843 309 MNNQG-KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (435)
Q Consensus 309 ~~~~~-~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~ 348 (435)
|+..+ .++.+..+..+|...-+.|+|++|+.+|.++++.+
T Consensus 1 M~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 41 (83)
T 2v6y_A 1 MSAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVL 41 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 34445 67889999999999999999999999999999875
No 317
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=91.68 E-value=1.6 Score=43.22 Aligned_cols=51 Identities=12% Similarity=0.064 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 383 YQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
...+...|+++|...|.+++.|+..+..+...|+.++|...|++|+.. |.+
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~ 245 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDG 245 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCS
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCc
Confidence 456778999999999999999999999999999999999999999999 875
No 318
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=91.51 E-value=0.76 Score=35.72 Aligned_cols=43 Identities=21% Similarity=0.177 Sum_probs=36.9
Q ss_pred CCCChH-HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Q 013843 307 WEMNNQ-GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (435)
Q Consensus 307 ~~~~~~-~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~ 349 (435)
.+|+.. +.++.+..+..+|...-..++|++|+.+|..|++++-
T Consensus 6 ~~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 6 SGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp CCSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 455555 6788999999999999999999999999999999754
No 319
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=90.57 E-value=1.7 Score=42.98 Aligned_cols=81 Identities=15% Similarity=0.053 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
-..+...|+..--+..+..|...|.+|+.+.|... ..|+.+|.+....+++-+|+-+|.++|...
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G---------------~~~nqLavla~~~~~~l~a~y~y~rsl~~~ 216 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNG---------------QPYNQLAILASSKGDHLTTIFYYCRSIAVK 216 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBS---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHSSS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCC---------------chHHHHHHHHhcccccHHHHHHHHHHHhcC
Confidence 34567789998888999999999999999999876 559999999999999999999999999887
Q ss_pred CCCHHHHHHHHHHHHh
Q 013843 398 CHNVKALYRRAQAYME 413 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~ 413 (435)
...+.|.-++...+..
T Consensus 217 ~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 217 FPFPAASTNLQKALSK 232 (497)
T ss_dssp BCCHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHH
Confidence 7788888777776654
No 320
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=89.07 E-value=0.79 Score=33.21 Aligned_cols=37 Identities=24% Similarity=0.123 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 013843 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (435)
Q Consensus 312 ~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~ 348 (435)
...++.+..+..+|...-+.|+|++|+.+|.++++.+
T Consensus 13 ~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 49 (83)
T 2w2u_A 13 VMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVL 49 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999875
No 321
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=88.54 E-value=4.4 Score=38.69 Aligned_cols=115 Identities=16% Similarity=0.066 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------------------HhccCCCCChHH---------H---HHHHH
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAAD-------------------CVSEDGSFVDDE---------Q---KLVKS 364 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~-------------------~~~~~~~~~~~~---------~---~~~~~ 364 (435)
..-....+.|..|.+.|++++-..+...... .....+...+.. | +...-
T Consensus 17 ~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~f 96 (394)
T 3txn_A 17 IKEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTF 96 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788899999999999888777655433 222222221111 1 11223
Q ss_pred HHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 365 LRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH------NVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 365 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~------~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
++..+-.++|..|+..|+|.+|+..+.+.++.-.. -...+....+.|..++++.++.+.|.+|...
T Consensus 97 lr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 97 LRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 34445568899999999999999999998874221 1466788899999999999999999998765
No 322
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=87.16 E-value=1 Score=32.70 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=34.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 013843 309 MNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (435)
Q Consensus 309 ~~~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~ 348 (435)
|+..+.++.+..+...|...-..|+|++|+.+|.++++++
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l 43 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYL 43 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4444567788899999999999999999999999999965
No 323
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=87.07 E-value=2.6 Score=35.31 Aligned_cols=28 Identities=11% Similarity=-0.056 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAA 345 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al 345 (435)
...++..|.....+|+++-|.++|.++=
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 4468889999999999999999998763
No 324
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=86.69 E-value=2.8 Score=30.97 Aligned_cols=37 Identities=19% Similarity=0.126 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Q 013843 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (435)
Q Consensus 313 ~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~ 349 (435)
..++.+..+...|...-+.|+|++|+.+|..+++.+-
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 4567888999999999999999999999999999764
No 325
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=85.47 E-value=5 Score=39.68 Aligned_cols=85 Identities=9% Similarity=-0.014 Sum_probs=66.1
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC-CCCHHHHHHHHHH
Q 013843 332 GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD-CHNVKALYRRAQA 410 (435)
Q Consensus 332 g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~~~a~~ 410 (435)
+..++|.+.|.+....-- .++ ..+|+.+-.+|.+.|++++|+..+++..+.. ..+...|..+-.+
T Consensus 84 ~~l~~A~~lf~~M~~~G~-~Pd-------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~ 149 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKV-VPN-------------EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFG 149 (501)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCC-------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCC-CCC-------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHH
Confidence 346778888877654311 111 3568888889999999999999999988753 2377888889999
Q ss_pred HHhcccHHHHHHHHHHHHHh
Q 013843 411 YMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 411 ~~~lg~~~eA~~~~~~al~l 430 (435)
|.+.|+.++|.+.|++..+.
T Consensus 150 ~~~~g~~~~A~~l~~~M~~~ 169 (501)
T 4g26_A 150 FCRKGDADKAYEVDAHMVES 169 (501)
T ss_dssp HHHTTCHHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHHHhc
Confidence 99999999999999987653
No 326
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.87 E-value=7.5 Score=29.79 Aligned_cols=74 Identities=9% Similarity=-0.001 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhcc-------CCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHH
Q 013843 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE-------DGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQG 385 (435)
Q Consensus 313 ~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~-------~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~ 385 (435)
.....+-.+.+.|...=..|+-+.|+.+|++.+..+.. .++...+.|+..+.+......|+..+..+++....
T Consensus 17 ~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le~ 96 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEK 96 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44566667777777777789999999999888875532 22355688999999999989999988887765544
Q ss_pred H
Q 013843 386 A 386 (435)
Q Consensus 386 A 386 (435)
.
T Consensus 97 ~ 97 (116)
T 2dl1_A 97 G 97 (116)
T ss_dssp H
T ss_pred c
Confidence 3
No 327
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=84.86 E-value=3.7 Score=29.83 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~ 349 (435)
...+..+..+|..+-+.|+|++|+.+|.++++.+-
T Consensus 13 ~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 13 STAAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999999999998753
No 328
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=83.57 E-value=1.9 Score=47.52 Aligned_cols=105 Identities=10% Similarity=0.042 Sum_probs=72.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCh--HHHHHH------HHHHHHHHhHHHHHHHHccCHHHHHHHHHHH
Q 013843 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD--DEQKLV------KSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (435)
Q Consensus 322 ~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~--~~~~~~------~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 393 (435)
+-+|..++..|++++|..+|++|-.-......... .+...+ .......|+.....+.+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 55788899999999999999988543221111100 111100 0112345677778888999999999999999
Q ss_pred HhhCCCC-H----HHHHHHHHHHHhcccHHHHHHHHHH
Q 013843 394 LDCDCHN-V----KALYRRAQAYMEIADLILAELDIKK 426 (435)
Q Consensus 394 l~~~p~~-~----~a~~~~a~~~~~lg~~~eA~~~~~~ 426 (435)
++..+.+ . ..|.++=..++.+++|++|...+..
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 9876433 2 2578888999999999999877743
No 329
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=83.08 E-value=5.5 Score=29.05 Aligned_cols=39 Identities=31% Similarity=0.404 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccC
Q 013843 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSED 351 (435)
Q Consensus 313 ~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~ 351 (435)
..+..+..+-.++..+.+.|+|++||.+.++|..++...
T Consensus 10 spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eA 48 (97)
T 2crb_A 10 GPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEA 48 (97)
T ss_dssp THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 346678888999999999999999999999999877654
No 330
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=82.94 E-value=6.8 Score=31.29 Aligned_cols=60 Identities=18% Similarity=0.052 Sum_probs=42.9
Q ss_pred HhHHHHHHH-HccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 370 WLNSAACCL-KLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 370 ~~nla~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
|.++|.-++ .+++-++--+.+...+.-++-++..++.+|.||.++|+..+|.+.+++|.+
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 455555433 345555544445554555667799999999999999999999999999875
No 331
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=82.68 E-value=4.1 Score=42.38 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=11.4
Q ss_pred HhHHHHHHHHccCHHHHHHHHHH
Q 013843 370 WLNSAACCLKLKDYQGAIELCSK 392 (435)
Q Consensus 370 ~~nla~~~~~~~~~~~A~~~~~~ 392 (435)
+.++|..+++.++++.|..+|.+
T Consensus 684 W~~la~~al~~~~~~~A~~~y~~ 706 (814)
T 3mkq_A 684 WRALGDASLQRFNFKLAIEAFTN 706 (814)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHH
Confidence 44445555555555555554444
No 332
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=81.91 E-value=11 Score=38.93 Aligned_cols=50 Identities=20% Similarity=0.138 Sum_probs=28.6
Q ss_pred HHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHH-------------HHHHHHhcccHHHHHHHHHHH
Q 013843 373 SAACCLKLKDYQGAIELCSKVLDCDCHNVKALYR-------------RAQAYMEIADLILAELDIKKA 427 (435)
Q Consensus 373 la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~-------------~a~~~~~lg~~~eA~~~~~~a 427 (435)
...||.+.++|..+...+.. ..+.+.+-. ...+++.+|++++|++.|.+.
T Consensus 700 A~~~y~~~~d~~~l~~l~~~-----~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 700 AIEAFTNAHDLESLFLLHSS-----FNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHHHHTCHHHHHHHHHH-----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHccChhhhHHHHHH-----cCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHHc
Confidence 35588899999887766543 112222111 223455667777777766543
No 333
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.77 E-value=2.5 Score=41.72 Aligned_cols=68 Identities=16% Similarity=0.031 Sum_probs=55.3
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC--CC---HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDC--HN---VKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p--~~---~~a~~~~a~~~~~lg~~~eA~~~~~~al~l~P~n 434 (435)
+.+++-+=..|+..+.|++|.....++.--.. .| ...+|..|.++...++|.+|.++|..|+...|.+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 45667777889999999999999999852211 12 4567889999999999999999999999887754
No 334
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=81.13 E-value=6 Score=37.64 Aligned_cols=63 Identities=6% Similarity=-0.026 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
...+...+..+...|++.+|+..+.+++...|.+. .++..+-.++...|+..+|+..|+++-.
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E---------------~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPYRE---------------PLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---------------HHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34556677888999999999999999999988653 4577788889999999999999888643
No 335
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=79.22 E-value=4.4 Score=33.88 Aligned_cols=46 Identities=17% Similarity=0.211 Sum_probs=39.6
Q ss_pred HHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHH
Q 013843 377 CLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKA 427 (435)
Q Consensus 377 ~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~a 427 (435)
.++.|+++.|.+.+++. ++...|-++|...+..|+++-|..+|.++
T Consensus 15 AL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 35789999999988765 67888999999999999999999999875
No 336
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=78.34 E-value=30 Score=37.35 Aligned_cols=100 Identities=6% Similarity=-0.098 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC-
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD- 397 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~- 397 (435)
..+...-+.+.+.|+.++|...|.+.-+........ ....|+-+-..|.+.|++++|++.+++..+..
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-----------dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~ 196 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-----------TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGL 196 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-----------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-----------CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC
Confidence 456777788999999999999997754432110001 13668888889999999999999999998753
Q ss_pred CCCHHHHHHHHHHHHhccc-HHHHHHHHHHHHH
Q 013843 398 CHNVKALYRRAQAYMEIAD-LILAELDIKKAIE 429 (435)
Q Consensus 398 p~~~~a~~~~a~~~~~lg~-~~eA~~~~~~al~ 429 (435)
.-|.-.|..+-.++.+.|+ .++|.+.|++..+
T Consensus 197 ~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 197 TPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp CCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 2377778888888888887 4788888877654
No 337
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=78.23 E-value=7.5 Score=31.56 Aligned_cols=72 Identities=11% Similarity=0.064 Sum_probs=55.4
Q ss_pred HHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 013843 329 FKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRA 408 (435)
Q Consensus 329 ~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a 408 (435)
...++.++|...|+.++.+ ...+ +.+|...|.--.++++..+|.+.+.+|+.+.|... -++..|
T Consensus 71 ~ei~D~d~aR~vy~~a~~~---hKkF------------AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~-~~le~a 134 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARAN---CKKF------------AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL-EMLEIA 134 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHH---CTTB------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH-HHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHH---hHHH------------HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH-HHHHHH
Confidence 4447899999999999986 2222 57788888888899999999999999999998644 344555
Q ss_pred HHHHhccc
Q 013843 409 QAYMEIAD 416 (435)
Q Consensus 409 ~~~~~lg~ 416 (435)
..-++.|.
T Consensus 135 ~~nl~~~~ 142 (161)
T 4h7y_A 135 LRNLNLQK 142 (161)
T ss_dssp HHHHHTTC
T ss_pred HHhhhcCC
Confidence 55555553
No 338
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=76.28 E-value=49 Score=30.61 Aligned_cols=110 Identities=13% Similarity=0.072 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHHhccCCCCChHHHHHHHHHHHH------------HHhHHHHHHHH
Q 013843 313 GKIEAAGRKKEEGNLLFKNGKYERAGKK-YNKAADCVSEDGSFVDDEQKLVKSLRVS------------CWLNSAACCLK 379 (435)
Q Consensus 313 ~~~~~a~~~~~~g~~~~~~g~y~~A~~~-y~~al~~~~~~~~~~~~~~~~~~~~~~~------------~~~nla~~~~~ 379 (435)
+..+.-+.++-.++.|.++++|++|++. |.-|+.+..........+ +-.+.+. ...++..++..
T Consensus 30 ~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~D---L~~llvevy~~~~~~~~~~~~~rL~~L~~~ 106 (336)
T 3lpz_A 30 EQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGD---LAVLLVDTFRQAGQRVDGASRGKLLGCLRL 106 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH---HHHHHHHHHHHHTCCCCHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHH---HHHHHHHHHHHcCCCCCHHHHHHHHHHHHh
Confidence 3366677788889999999999999987 455555443321000000 0000001 11122222222
Q ss_pred ccCH-HHHHHHHHHHHhh-------CCCCHHHHHHHHHHHHhcccHHHHHHHHH
Q 013843 380 LKDY-QGAIELCSKVLDC-------DCHNVKALYRRAQAYMEIADLILAELDIK 425 (435)
Q Consensus 380 ~~~~-~~A~~~~~~al~~-------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~ 425 (435)
...- ..=..+.++|++. .-.++..+..+|..|.+-+++.+|..+|-
T Consensus 107 ~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 107 FQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 2210 0112233333332 22467889999999999999999998873
No 339
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=75.69 E-value=5.1 Score=39.01 Aligned_cols=101 Identities=6% Similarity=0.005 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHHHhccCCCCChHHH-HHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCC--C--------CH
Q 013843 333 KYERAGKKYNKAADCVSEDGSFVDDEQ-KLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC--H--------NV 401 (435)
Q Consensus 333 ~y~~A~~~y~~al~~~~~~~~~~~~~~-~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p--~--------~~ 401 (435)
..+.|.+...++....-.+...+.++. ..-+.-..-+.+++-.+|+++++...|....+..-...+ . -+
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 456677777777777544432211110 001112223345666889999999988887754433222 1 13
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHh-CCC
Q 013843 402 KALYRRAQAYMEIADLILAELDIKKAIEA-DPQ 433 (435)
Q Consensus 402 ~a~~~~a~~~~~lg~~~eA~~~~~~al~l-~P~ 433 (435)
..+|.+|..++..++|.+|.++|..|++. -|.
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCc
Confidence 56899999999999999999999999987 554
No 340
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=74.95 E-value=21 Score=25.77 Aligned_cols=34 Identities=26% Similarity=0.262 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~ 348 (435)
...++.+...|..+|+.++|.+|+.+|+++....
T Consensus 50 e~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 50 EKKARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 3678899999999999999999999999998764
No 341
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=73.99 E-value=8.3 Score=26.93 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhcc
Q 013843 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (435)
Q Consensus 312 ~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~ 350 (435)
+++.+.-....+.|..+...|++++|+.+|-+|+...+.
T Consensus 11 e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 11 EAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 344555667788999999999999999999999998775
No 342
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=72.73 E-value=5.8 Score=28.94 Aligned_cols=28 Identities=21% Similarity=0.089 Sum_probs=16.9
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHH
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVL 394 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al 394 (435)
+..+-.+|..+++.++|++||.+..+|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4445555666666666666666665554
No 343
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=71.43 E-value=11 Score=27.88 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhcc
Q 013843 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (435)
Q Consensus 311 ~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~ 350 (435)
.+++.+........|..+...|+++.|+.+|-+|+...+.
T Consensus 13 ~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 13 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 4556666778889999999999999999999999998875
No 344
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.52 E-value=5.5 Score=38.51 Aligned_cols=62 Identities=13% Similarity=0.168 Sum_probs=54.3
Q ss_pred HHhHHHHHHHHccCHHHHHHHHHHHHhhCCC---CHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 369 CWLNSAACCLKLKDYQGAIELCSKVLDCDCH---NVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 369 ~~~nla~~~~~~~~~~~A~~~~~~al~~~p~---~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
++..+|..|.+.|++++|.+.|.++...... -...++....++...++|..|...+.++..+
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 5678999999999999999999999876432 3578888999999999999999999999766
No 345
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=70.04 E-value=17 Score=35.04 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCC------C-hH-HHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHH
Q 013843 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF------V-DD-EQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCS 391 (435)
Q Consensus 320 ~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~------~-~~-~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 391 (435)
-+..+++.+.+.++|.+|.-.+.....+...+... . .. ......+++..++...+..+.+-+.|+.|+..|+
T Consensus 37 ~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k 116 (436)
T 2yin_A 37 YLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCK 116 (436)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 44567888999999999988886555544332111 0 00 0111223344456666666777778999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHhcccH
Q 013843 392 KVLDCDCHNVKALYRRAQAYMEIADL 417 (435)
Q Consensus 392 ~al~~~p~~~~a~~~~a~~~~~lg~~ 417 (435)
..+..--.+..-|-.++.+|..+.++
T Consensus 117 ~L~~~yE~~~~Dy~~Ls~~~~~~a~~ 142 (436)
T 2yin_A 117 ELAEQYEMEIFDYELLSQNLIQQAKF 142 (436)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99865444434455666666665543
No 346
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=68.67 E-value=12 Score=38.15 Aligned_cols=53 Identities=13% Similarity=0.041 Sum_probs=45.0
Q ss_pred HHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 377 CLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 377 ~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
.++.++|..|..++.+.-.-.....++.|.+|.++..+|+.++|...|+++..
T Consensus 295 Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 295 ALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 45679999999998776554445788999999999999999999999998864
No 347
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.78 E-value=28 Score=33.62 Aligned_cols=73 Identities=15% Similarity=0.175 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 316 ~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
...+.+..+...++..++|.+|...++++....-..... ..+....+...|..+...++|.+|..+|..++.
T Consensus 175 ~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~--------~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~ 246 (445)
T 4b4t_P 175 EKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKY--------ESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQ 246 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCC--------HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCc--------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 445666777888999999999999999986433222221 356677788889999999999999999999876
Q ss_pred h
Q 013843 396 C 396 (435)
Q Consensus 396 ~ 396 (435)
.
T Consensus 247 ~ 247 (445)
T 4b4t_P 247 T 247 (445)
T ss_dssp H
T ss_pred c
Confidence 4
No 348
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=66.81 E-value=54 Score=27.18 Aligned_cols=108 Identities=13% Similarity=0.020 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HhccCCCC---------ChHHHHHHHHHHHHHHhHHHHHHHHccCHHHH
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAAD--CVSEDGSF---------VDDEQKLVKSLRVSCWLNSAACCLKLKDYQGA 386 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~--~~~~~~~~---------~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A 386 (435)
+....=.+..+.+.++|..|+...++.|+ ... +++. +..+. --.++-+|....+.++-++|
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~-d~~~d~~~~~ffvd~~Dk-------EfFy~l~a~lltq~g~r~Ea 133 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVER-DPDVDARIQEMFVDPGDE-------EFFESLLGDLCTLSGYREEG 133 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBC-CCCCCHHHHTTSCCTTCH-------HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-CcccccccceeeeccchH-------HHHHHHHHHHHHHhcCHHHh
Confidence 33445567788899999999999999984 221 1111 11111 12356678888999999999
Q ss_pred HHHHHHHHhhCCCCH------------------------------------------------H------------HHHH
Q 013843 387 IELCSKVLDCDCHNV------------------------------------------------K------------ALYR 406 (435)
Q Consensus 387 ~~~~~~al~~~p~~~------------------------------------------------~------------a~~~ 406 (435)
+.++.......|-.+ + ..-.
T Consensus 134 I~y~~~Sf~~~~lf~~vEnliyeN~vp~~~d~~~i~~~~~~~i~~~y~~d~~~lHe~~s~~~ikkY~n~iPGiGSY~va~ 213 (242)
T 3kae_A 134 IGHYVRSFGKSFLFSPVENLLLENKVPQKRDKENVRQTGRRGIEEEYVSDSIEFHESLSPSLVKKYMEHVPGIGSYFISN 213 (242)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTHHHHHHHH
T ss_pred hhHhhhhcCCccccchHHHHHhhcCCCcccchHHHHhhhhccchhhhhhhHHHHHHhccHHHHHHHHHhCCCchhHHHHH
Confidence 999998776543210 0 0123
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhCCC
Q 013843 407 RAQAYMEIADLILAELDIKKAIEADPQ 433 (435)
Q Consensus 407 ~a~~~~~lg~~~eA~~~~~~al~l~P~ 433 (435)
-|.-|+.+|..++.+++|...-+.||.
T Consensus 214 aa~~yf~lg~~d~s~~lf~~lR~kDP~ 240 (242)
T 3kae_A 214 AARRYFNLGMNDKSKACFELVRRKDPM 240 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHhcccchhHHHHHHHHHhcCCC
Confidence 567788999999999999999999985
No 349
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=66.66 E-value=77 Score=28.91 Aligned_cols=108 Identities=10% Similarity=-0.052 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHHhccCCCCChHHHHHHHHHHHH------------HHhHHHHHHHHcc
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKK-YNKAADCVSEDGSFVDDEQKLVKSLRVS------------CWLNSAACCLKLK 381 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~-y~~al~~~~~~~~~~~~~~~~~~~~~~~------------~~~nla~~~~~~~ 381 (435)
.+.-+.++-..+.|.++++|++|+.. |.-|+.+........ ...+-.+.+. ...++..++....
T Consensus 30 YEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~s---a~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p 106 (312)
T 2wpv_A 30 YEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGS---GTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELD 106 (312)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcch---HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCC
Confidence 34456677788889999999999988 444444443321000 0000000000 0111222221111
Q ss_pred CHH-HHHHHHHHHHhh-------CCCCHHHHHHHHHHHHhcccHHHHHHHHH
Q 013843 382 DYQ-GAIELCSKVLDC-------DCHNVKALYRRAQAYMEIADLILAELDIK 425 (435)
Q Consensus 382 ~~~-~A~~~~~~al~~-------~p~~~~a~~~~a~~~~~lg~~~eA~~~~~ 425 (435)
.-+ .=..+.++|++. .-.++..+..+|..|..-+++.+|..+|-
T Consensus 107 ~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 107 PSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp TTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 000 112333444432 12467889999999999999999999884
No 350
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=66.09 E-value=53 Score=26.78 Aligned_cols=72 Identities=17% Similarity=0.171 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHH-hHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCW-LNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~-~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.......|..+|..|+|-+|-+.++.+-...+... ++. .-+...+. +..|..+.+.+++..|...+.+++..
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~----~er---~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGN----TES---KFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSS----HHH---HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCc----hHH---HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 34457788999999999999999998876543221 121 22333445 56677788899999999999999874
No 351
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=65.58 E-value=13 Score=24.07 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=35.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Q 013843 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (435)
Q Consensus 310 ~~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~ 349 (435)
+..+.+..++++-..|.....-.+...|++.+++||+++.
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 3456788999999999999999999999999999998764
No 352
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=59.88 E-value=20 Score=35.40 Aligned_cols=73 Identities=18% Similarity=0.084 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
+..+.-.-..|...+.|++|..+..++. .|... .++ ...+..++.+|.++.-+.+|.+|.+++..|+...
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~-~sn-------~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHTD-VSS-------SLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTT-SCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCccc-CCH-------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 4455556677888999999999888874 33221 111 2245678889999999999999999999999988
Q ss_pred CCC
Q 013843 398 CHN 400 (435)
Q Consensus 398 p~~ 400 (435)
|.+
T Consensus 301 p~~ 303 (523)
T 4b4t_S 301 PHN 303 (523)
T ss_dssp SCS
T ss_pred Ccc
Confidence 754
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=58.72 E-value=43 Score=35.88 Aligned_cols=93 Identities=10% Similarity=0.045 Sum_probs=59.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCh--HHHHH------HHHHHHHHHhHHHHHHHHccCHHHHHHHHHHH
Q 013843 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD--DEQKL------VKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (435)
Q Consensus 322 ~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~--~~~~~------~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 393 (435)
+-+|..++..|++++|..+|++|-.-......... .+... ........|+..+..+.+.+-|+-+++.++.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 44788899999999999999987643321111111 11111 11123446788888999999999999999999
Q ss_pred Hhh-CCCCHH----HHHHHHHHHHhc
Q 013843 394 LDC-DCHNVK----ALYRRAQAYMEI 414 (435)
Q Consensus 394 l~~-~p~~~~----a~~~~a~~~~~l 414 (435)
|+. .+++.. .|.++=++...+
T Consensus 924 I~~~~~dd~~l~~~l~~r~f~~a~a~ 949 (950)
T 4gq2_M 924 DASKETDDEDLSIAITHETLKTACAA 949 (950)
T ss_dssp HHTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HhhcccCCccchHHHHHHHHHHHhhC
Confidence 975 344443 455554444443
No 354
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=55.36 E-value=35 Score=28.95 Aligned_cols=37 Identities=16% Similarity=0.078 Sum_probs=32.3
Q ss_pred HHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHH
Q 013843 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVK 402 (435)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~ 402 (435)
.+..++.+|..++..++|.+|..++..|+...|....
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~ 49 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQ 49 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHH
Confidence 4566889999999999999999999999999887643
No 355
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=55.24 E-value=21 Score=36.55 Aligned_cols=52 Identities=15% Similarity=0.129 Sum_probs=46.2
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHH
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLIL 419 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~e 419 (435)
......|...+..|+|.-|.+.++.++..+|+|..|...+|.+|.++|.-.+
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~ 501 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 501 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 3466788888899999999999999999999999999999999999985433
No 356
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=54.75 E-value=58 Score=23.57 Aligned_cols=68 Identities=13% Similarity=-0.008 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHhcc----CCCCChHHHHHHHHHHHHHHhHHHHHHHHc
Q 013843 313 GKIEAAGRKKEEGNLLFKN---GKYERAGKKYNKAADCVSE----DGSFVDDEQKLVKSLRVSCWLNSAACCLKL 380 (435)
Q Consensus 313 ~~~~~a~~~~~~g~~~~~~---g~y~~A~~~y~~al~~~~~----~~~~~~~~~~~~~~~~~~~~~nla~~~~~~ 380 (435)
...+.+-.+.+.|...=.. |+-++|+.+|++.+.-+.. ...-..++|+..+.+...-..|+..+.-++
T Consensus 11 ~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL 85 (89)
T 3eab_A 11 VFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666777777777666 8888888888888775422 111245778777777777777777665443
No 357
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=53.76 E-value=60 Score=23.43 Aligned_cols=53 Identities=15% Similarity=0.229 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCH---HHH-HHHHHHHHh
Q 013843 360 KLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNV---KAL-YRRAQAYME 413 (435)
Q Consensus 360 ~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~---~a~-~~~a~~~~~ 413 (435)
+-+.+..+..+..-|.-+++.++|.+|...++++..+. +|+ +.+ |.++.|...
T Consensus 46 ~ll~e~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t-en~~i~ki~~fyl~ec~kk 102 (106)
T 2vkj_A 46 ELLKEKKARSLIAEGKDLFETANYGEALVFFEKALNLS-DNEEIKKIASFYLEECRKK 102 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc-cCHHHHHHHHHHHHHHHHH
Confidence 34455566667778888999999999999999998764 233 344 666666543
No 358
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=53.02 E-value=18 Score=25.19 Aligned_cols=26 Identities=12% Similarity=0.171 Sum_probs=12.9
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 372 NSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 372 nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
.+|..+...|++++|+.++.+|+...
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 44444555555555555555555443
No 359
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=52.62 E-value=15 Score=26.01 Aligned_cols=32 Identities=16% Similarity=0.089 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~ 349 (435)
.-.....|..+-..|+|+.|+.+|+.++....
T Consensus 12 i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~ 43 (78)
T 2rpa_A 12 IVENVKLAREYALLGNYDSAMVYYQGVLDQMN 43 (78)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 45566778888899999999999999998764
No 360
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=51.67 E-value=70 Score=24.43 Aligned_cols=20 Identities=25% Similarity=0.406 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHhhCCCCHH
Q 013843 383 YQGAIELCSKVLDCDCHNVK 402 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~~~ 402 (435)
|.+|+++|..+++..+.+.+
T Consensus 41 Y~~Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 41 YQHAVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHHhccCCHH
Confidence 45555555555556655554
No 361
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=50.11 E-value=67 Score=22.97 Aligned_cols=26 Identities=19% Similarity=0.087 Sum_probs=14.4
Q ss_pred HhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 370 WLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 370 ~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
+...|.-.-+.|+|++|+.+|..+++
T Consensus 19 lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 19 VLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44444444555666666666665554
No 362
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=49.60 E-value=45 Score=24.30 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHhhCCCCH
Q 013843 383 YQGAIELCSKVLDCDCHNV 401 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~~ 401 (435)
|..|++++..++...|+..
T Consensus 38 Y~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 38 YQEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHCCCHH
Confidence 4555555555555565443
No 363
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=48.93 E-value=37 Score=24.18 Aligned_cols=18 Identities=28% Similarity=0.355 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHhhCCCC
Q 013843 383 YQGAIELCSKVLDCDCHN 400 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~ 400 (435)
|.+|++++.++++..|+.
T Consensus 34 Y~~aie~l~~~lk~e~d~ 51 (83)
T 2v6y_A 34 YKKAIEVLSQIIVLYPES 51 (83)
T ss_dssp HHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHCCCH
Confidence 344555555555555543
No 364
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=48.17 E-value=1.6e+02 Score=28.71 Aligned_cols=47 Identities=9% Similarity=-0.121 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhhCCCC-----------HHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 383 YQGAIELCSKVLDCDCHN-----------VKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~-----------~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
|+..+.+++.|+..-|.. .-|+..+|++|+..++|++|.+..++++.
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777888888765531 25688899999999999999999999985
No 365
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=47.22 E-value=95 Score=25.24 Aligned_cols=60 Identities=7% Similarity=0.040 Sum_probs=45.1
Q ss_pred hHHHHHHHHccCHHHHHHHHHHHHhhCCCC------HHHHHH-HHHHH--HhcccHHHHHHHHHHHHHh
Q 013843 371 LNSAACCLKLKDYQGAIELCSKVLDCDCHN------VKALYR-RAQAY--MEIADLILAELDIKKAIEA 430 (435)
Q Consensus 371 ~nla~~~~~~~~~~~A~~~~~~al~~~p~~------~~a~~~-~a~~~--~~lg~~~eA~~~~~~al~l 430 (435)
+..+..++..++|-+|-+.++.+-...+.. .+++.+ +|.++ .+.|+..-|...+.+|+..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 445666777799999999999998776554 345555 54444 5679999999999999873
No 366
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=47.18 E-value=24 Score=37.91 Aligned_cols=48 Identities=19% Similarity=0.306 Sum_probs=37.7
Q ss_pred HHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q 013843 377 CLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAI 428 (435)
Q Consensus 377 ~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al 428 (435)
++..+.++- ....+...|.++-.-|-+|.+|+.+|++++|..+|++|-
T Consensus 820 L~~~~~~~~----a~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 820 LFLFKQYNA----CMQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHTTCHHH----HHHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHhcHHHH----HHHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 444555543 344567788888888999999999999999999999864
No 367
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=46.89 E-value=69 Score=28.34 Aligned_cols=53 Identities=23% Similarity=0.298 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH-ccCHHHHHHHHHHHHh
Q 013843 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (435)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 395 (435)
+.|...|++|+++. .....+ +.++..+.+|.+..|+. +++.++|+..+++|+.
T Consensus 173 e~a~~aY~~A~~iA-~~L~pt-------hPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPT-------HPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTT-------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCC-------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56888999999987 433222 24556667787777665 8999999999999885
No 368
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=46.26 E-value=1e+02 Score=26.61 Aligned_cols=46 Identities=13% Similarity=-0.031 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhh--CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 385 GAIELCSKVLDC--DCHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 385 ~A~~~~~~al~~--~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
.+...|...... --..+..|-..|..+...|+|.+|.+.|+++++-
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRM 179 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 445555555543 3345566666777788888888888888888764
No 369
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=46.09 E-value=4.3 Score=36.06 Aligned_cols=40 Identities=18% Similarity=0.151 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhcc
Q 013843 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (435)
Q Consensus 311 ~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~ 350 (435)
.+.....|..+..+|..+=+.|+|++|+.+|.+|++++-.
T Consensus 16 ~dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~ 55 (257)
T 2ymb_A 16 QDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 55 (257)
T ss_dssp ----------------------------------------
T ss_pred CChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3456677888999999999999999999999999987644
No 370
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=45.32 E-value=1.2e+02 Score=24.45 Aligned_cols=45 Identities=9% Similarity=0.028 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhC--CCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 386 AIELCSKVLDCD--CHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 386 A~~~~~~al~~~--p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
+.+.|....... -..+..|-..|..+...|++.+|.+.|+.+++-
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQN 130 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 566666655443 344556666777788888888888888888764
No 371
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=44.73 E-value=52 Score=28.45 Aligned_cols=72 Identities=14% Similarity=0.051 Sum_probs=47.8
Q ss_pred HHHHHHHHHHH-----HHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHH-HccCHHHHHHHHH
Q 013843 318 AGRKKEEGNLL-----FKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCL-KLKDYQGAIELCS 391 (435)
Q Consensus 318 a~~~~~~g~~~-----~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~ 391 (435)
+--++-.|+.| |..|+-+.|...|+.|.++....... .+.++..+.+|.+..|+ -+++.++|+...+
T Consensus 120 VFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyYEIln~p~~Ac~lAk 192 (227)
T 2o8p_A 120 FFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDK-------IEQLPLGFIQNLAYILSEKYGEKKQVFNMLN 192 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGG-------GGGSCHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCC-------CChHHHHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 44455555543 35667889999999999865322111 11234556677777655 5899999999999
Q ss_pred HHHhh
Q 013843 392 KVLDC 396 (435)
Q Consensus 392 ~al~~ 396 (435)
+|+..
T Consensus 193 ~Afd~ 197 (227)
T 2o8p_A 193 SLGKI 197 (227)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99764
No 372
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=43.44 E-value=93 Score=22.66 Aligned_cols=64 Identities=17% Similarity=0.045 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 322 ~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
...|..+|..|+|-+|-+.++..-...+. ++ ..-+...+....|..+.+.|++ |...+.+++..
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~------~~---~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~ 68 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATG------EE---RRLLQGVILLAAALHQRRLGRP--GLRNLRKAEAR 68 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCH------HH---HHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCC------ch---HHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHH
Confidence 35678899999999999999998876421 11 1222333455566677778888 88899999873
No 373
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=43.37 E-value=19 Score=25.43 Aligned_cols=27 Identities=26% Similarity=0.217 Sum_probs=24.1
Q ss_pred HhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 370 WLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 370 ~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
...+|+=|..+|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 567888999999999999999999864
No 374
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=42.32 E-value=89 Score=22.15 Aligned_cols=24 Identities=21% Similarity=0.088 Sum_probs=11.8
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHh
Q 013843 372 NSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 372 nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
..|.-.-+.|+|++|+.+|.++++
T Consensus 24 ~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 24 INAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHH
Confidence 334444445555555555555543
No 375
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=42.22 E-value=64 Score=28.07 Aligned_cols=54 Identities=20% Similarity=0.210 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH-ccCHHHHHHHHHHHHh
Q 013843 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (435)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 395 (435)
+.|...|++|+++....... .+.++..+.+|.+..|+. +++.++|+..+++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~p-------thPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPP-------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56888999999876432111 124556667777776665 8999999999988875
No 376
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=42.07 E-value=89 Score=30.37 Aligned_cols=87 Identities=15% Similarity=-0.005 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHHH--HHHHHcCCHHH-HHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH------c
Q 013843 310 NNQGKIEAAGRKKEEG--NLLFKNGKYER-AGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK------L 380 (435)
Q Consensus 310 ~~~~~~~~a~~~~~~g--~~~~~~g~y~~-A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~------~ 380 (435)
+..+++..|+.++..+ +.--+.-+|.+ |+++|++|++.+......++-+.-......+..|--.|.-|++ .
T Consensus 421 sL~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDyy~~AA~k~~y 500 (526)
T 2wb7_A 421 SLQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALN 500 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHHHHHHHHHHhc
Q ss_pred cCHHHHHHHHHHHHhh
Q 013843 381 KDYQGAIELCSKVLDC 396 (435)
Q Consensus 381 ~~~~~A~~~~~~al~~ 396 (435)
|..++|.....+|-++
T Consensus 501 G~~eqAe~l~~~A~~~ 516 (526)
T 2wb7_A 501 GDLEQAKIDAEKAKEY 516 (526)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHH
No 377
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=41.41 E-value=27 Score=38.37 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=37.4
Q ss_pred HHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHHHHHHHHH
Q 013843 375 ACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKA 427 (435)
Q Consensus 375 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~a 427 (435)
..+++.+.++-|. ..+...|.++-.-|.+|.+++..|++++|.++|++|
T Consensus 820 ~~l~~~~~~~~~~----~l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~ka 868 (1139)
T 4fhn_B 820 EKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTT 868 (1139)
T ss_dssp HHHHHHSCTTHHH----HHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHhhhHHHHH----HHhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3344455554433 345667888888899999999999999999999886
No 378
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=40.16 E-value=63 Score=25.78 Aligned_cols=46 Identities=13% Similarity=0.131 Sum_probs=38.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh----ccCCCC
Q 013843 309 MNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV----SEDGSF 354 (435)
Q Consensus 309 ~~~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~----~~~~~~ 354 (435)
.+...-+..+..+...|..|...|+++.|.-.|.+++.+. |..+++
T Consensus 31 i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~IpkHpdy 80 (146)
T 2xze_A 31 IPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDY 80 (146)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGGSTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcccCccc
Confidence 4567778999999999999999999999999999976654 555544
No 379
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=38.99 E-value=1.6e+02 Score=24.00 Aligned_cols=45 Identities=11% Similarity=0.140 Sum_probs=24.7
Q ss_pred HHHHHHHHHhh--CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 386 AIELCSKVLDC--DCHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 386 A~~~~~~al~~--~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
+.+.|...... --..+..|-..|..+...|++.+|.+.|+.+++.
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~ 125 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQ 125 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 34444444433 2334445555566666666666666666666654
No 380
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=38.98 E-value=39 Score=32.63 Aligned_cols=30 Identities=17% Similarity=0.130 Sum_probs=25.5
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
..++.-+|.+|+-+++|++|+.++++++..
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 456777888999999999999999999863
No 381
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=38.79 E-value=78 Score=27.99 Aligned_cols=54 Identities=20% Similarity=0.210 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH-ccCHHHHHHHHHHHHh
Q 013843 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (435)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 395 (435)
+.|...|++|+++....... .+.++..+.+|.+..|+. +++.++|+..+++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~p-------ThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPP-------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56788999998865322111 124566667777776665 8999999999888874
No 382
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=38.25 E-value=60 Score=31.28 Aligned_cols=48 Identities=19% Similarity=0.009 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhhCCCC--------HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 383 YQGAIELCSKVLDCDCHN--------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~--------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
|+..+.+++.|+..-|.. .-|+..+|++|+.+++|++|++..++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 567788888888775542 356788999999999999999999999853
No 383
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=38.21 E-value=62 Score=34.11 Aligned_cols=62 Identities=27% Similarity=0.466 Sum_probs=47.7
Q ss_pred CCCCCCCEEEEEEEEEEc-CCc-------------------------------EEecccCCCCCeeEEeCCCccccchHH
Q 013843 60 DTPEFGDEVTIHYVGTLL-DGT-------------------------------KFDSTRDRYDPLTFKLGTGQVATGLDN 107 (435)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~-~g~-------------------------------~~~~s~~~~~p~~~~lg~~~~~~g~~~ 107 (435)
..+..|+.|.|.|+..+. +|. .+++. ..+.|.+|.+.+.+-++.
T Consensus 559 ~~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~----~e~~fe~g~g~~~~~le~ 634 (950)
T 3htx_A 559 QSITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESN----EEIEFEVGTGSMNPHIES 634 (950)
T ss_dssp -CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEE----EEEEEEETTTCBCHHHHH
T ss_pred eccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhccccc----HHHHHHHhcCCccchhhh
Confidence 456789999999998886 332 12221 348899999999999999
Q ss_pred HhccccCCcEEEEEEEcC
Q 013843 108 GIITMKKRECAVFTFTLP 125 (435)
Q Consensus 108 ~l~~m~~G~~~~~~~~ip 125 (435)
.+..|.+|++..|....|
T Consensus 635 vV~qms~gqT~~F~~~~P 652 (950)
T 3htx_A 635 EVTQMTVGEYASFKMTPP 652 (950)
T ss_dssp HHTTCCTTCEEEEEESSC
T ss_pred eeeeccccceeEEeccCc
Confidence 999999999998844455
No 384
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=38.02 E-value=77 Score=30.94 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=26.3
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
..++.-+|.+|+-+++|++|+.++++++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 456777889999999999999999999975
No 385
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=37.89 E-value=80 Score=27.93 Aligned_cols=54 Identities=20% Similarity=0.244 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH-ccCHHHHHHHHHHHHh
Q 013843 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (435)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 395 (435)
+.|...|++|+.+....... .+.++..+.+|.+..|+. +++.++|+..+++|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAP-------THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCC-------CCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 56888999999876432211 124556667777776665 8999999999888874
No 386
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=37.78 E-value=83 Score=27.61 Aligned_cols=54 Identities=20% Similarity=0.236 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHH-ccCHHHHHHHHHHHHh
Q 013843 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (435)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 395 (435)
+.|...|++|..+....... .+.++..+.+|.+..|+. +++.++|+..+++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQP-------THPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 66888999998865322111 124556667777776665 8999999999888874
No 387
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=37.47 E-value=32 Score=25.27 Aligned_cols=27 Identities=11% Similarity=0.199 Sum_probs=14.6
Q ss_pred hHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 371 LNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 371 ~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
..+|..++..|+++.|+.++.+|+...
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 345555555555555555555555443
No 388
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=37.02 E-value=1.1e+02 Score=21.61 Aligned_cols=17 Identities=24% Similarity=0.253 Sum_probs=8.3
Q ss_pred HccCHHHHHHHHHHHHh
Q 013843 379 KLKDYQGAIELCSKVLD 395 (435)
Q Consensus 379 ~~~~~~~A~~~~~~al~ 395 (435)
..++|++|+.+|..+++
T Consensus 25 ~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 25 TATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 34455555555544443
No 389
>3dza_A Uncharacterized putative membrane protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=36.62 E-value=1.5e+02 Score=24.77 Aligned_cols=63 Identities=13% Similarity=0.009 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-------HhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHH
Q 013843 319 GRKKEEGNLLFKNGKYERAGKKYNKAAD-------CVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCS 391 (435)
Q Consensus 319 ~~~~~~g~~~~~~g~y~~A~~~y~~al~-------~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 391 (435)
......+|..++.|+-..|++.++-+=. +.|-. ...-..++|..++..|+|.+|-..++
T Consensus 109 ~aAI~~AN~~Lk~Gd~~~A~~~LklAgvdv~~~~allPL~--------------qT~~~V~~A~~ll~~gk~yeAn~aLk 174 (191)
T 3dza_A 109 ESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYLMPLN--------------QTRKAVAQSQELLKAGKYYEANLVLK 174 (191)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCEEEEEEEEEEHH--------------HHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHcCCchhhhhhhCChH--------------hHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 6778889999999999999987766511 11110 12236789999999999999999888
Q ss_pred HHHh
Q 013843 392 KVLD 395 (435)
Q Consensus 392 ~al~ 395 (435)
.+..
T Consensus 175 ~Aed 178 (191)
T 3dza_A 175 GAEE 178 (191)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8765
No 390
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=36.07 E-value=44 Score=32.34 Aligned_cols=30 Identities=10% Similarity=0.130 Sum_probs=25.3
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
..++.-+|.+|+-+++|++|+..+++++..
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 456777888888899999999999999863
No 391
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=36.05 E-value=93 Score=27.07 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHH-HccCHHHHHHHHHHHHh
Q 013843 334 YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCL-KLKDYQGAIELCSKVLD 395 (435)
Q Consensus 334 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~ 395 (435)
-+.|...|++|.++....... .+.++..+.+|.+..|+ -+++.++|+..+++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPP-------TNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 366888999998865322211 12455666777777655 57999999998888864
No 392
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=35.58 E-value=1.9e+02 Score=28.44 Aligned_cols=48 Identities=10% Similarity=-0.071 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhhCCC-----C--------HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 383 YQGAIELCSKVLDCDCH-----N--------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~-----~--------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
|+..+.+++.|+..-|. . .-|+-.+|++|+..++|++|.+..++++..
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 55677788888876662 1 256888999999999999999999999863
No 393
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=35.40 E-value=2.1e+02 Score=27.57 Aligned_cols=47 Identities=13% Similarity=-0.060 Sum_probs=37.2
Q ss_pred HH-HHHHHHHHHHhh-CCC--------CHHHHHHHHHHHHhcc---------cHHHHHHHHHHHHH
Q 013843 383 YQ-GAIELCSKVLDC-DCH--------NVKALYRRAQAYMEIA---------DLILAELDIKKAIE 429 (435)
Q Consensus 383 ~~-~A~~~~~~al~~-~p~--------~~~a~~~~a~~~~~lg---------~~~eA~~~~~~al~ 429 (435)
|+ ..+.+++.|+.. -|. -.-|+..+|++|+.++ +|++|.+..++++.
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 55 677788888876 442 1356788999999888 99999999999986
No 394
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=35.36 E-value=1.5e+02 Score=32.14 Aligned_cols=63 Identities=10% Similarity=-0.029 Sum_probs=52.2
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhh----CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDC----DCHNVKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~----~p~~~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
...|+.+-.+|.+.|+.++|...+.+.-+. -.-+...|.-+-..|.+.|++++|++.|++..+
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 345777888999999999999999775432 234788999999999999999999999998765
No 395
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=35.35 E-value=69 Score=30.92 Aligned_cols=47 Identities=15% Similarity=0.057 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhhCCCC--------HHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 383 YQGAIELCSKVLDCDCHN--------VKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~--------~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
|+..+.+++.|+.+-|.. .-|+..+|++|+.+++|++|.+..++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 567888888888765542 35678899999999999999999999986
No 396
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=35.07 E-value=72 Score=22.92 Aligned_cols=37 Identities=14% Similarity=0.085 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 013843 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADC 347 (435)
Q Consensus 311 ~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~ 347 (435)
..+.++.+..+.+.|..++++|++..|+..+.=+-..
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~Gw 64 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAW 64 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3577889999999999999999999999887655443
No 397
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=34.12 E-value=75 Score=22.88 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 013843 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADC 347 (435)
Q Consensus 311 ~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~ 347 (435)
..+.++.+..+.+.|..+++.|++..|+..+.=+-..
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~Gw 68 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGL 68 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3567889999999999999999999999876555443
No 398
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=34.07 E-value=87 Score=30.58 Aligned_cols=48 Identities=15% Similarity=0.009 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhhCCCC-----------HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 383 YQGAIELCSKVLDCDCHN-----------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~-----------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
|+..+.+++.|+..-|.. .-|+..+|++|+.+++|++|.+..++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 566778888888765532 256788999999999999999999999864
No 399
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=32.71 E-value=47 Score=32.30 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=26.3
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhhC
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~ 397 (435)
..++.-+|.+|+-+++|++|+..+++++...
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 4567778889999999999999999999753
No 400
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=32.20 E-value=2.9e+02 Score=25.79 Aligned_cols=100 Identities=10% Similarity=-0.084 Sum_probs=59.8
Q ss_pred HHHcCCHHHHHHHHHHHHHHhc----cCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHhh-------
Q 013843 328 LFKNGKYERAGKKYNKAADCVS----EDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC------- 396 (435)
Q Consensus 328 ~~~~g~y~~A~~~y~~al~~~~----~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~------- 396 (435)
.-...+.++|++...+...... ....... .+...+-...+...++..|++.++..+|....+++-..
T Consensus 86 ~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~--~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~ 163 (393)
T 4b4t_O 86 LKDSKDFDESLKYLDDLKAQFQELDSKKQRNNG--SKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSI 163 (393)
T ss_dssp HHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCC--SSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccc--hhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCc
Confidence 3455688888888876643221 1000000 00000112345567788999999999999988888643
Q ss_pred CCC-CHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 397 DCH-NVKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 397 ~p~-~~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
+|. +.+.|...+..|...++|.++..++-..+.
T Consensus 164 ~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 164 PLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 221 234455567777788898888777666664
No 401
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=32.15 E-value=76 Score=30.76 Aligned_cols=48 Identities=15% Similarity=0.112 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhhCCCC--------HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 383 YQGAIELCSKVLDCDCHN--------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~--------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
|+..+.+++.|+.+-|.. .-|+..+|++|+.+++|++|.+..++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 677888888888775542 356788999999999999999999999864
No 402
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=31.21 E-value=1.1e+02 Score=29.48 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=26.4
Q ss_pred HHHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
+..++.-+|.+|+-+++|++|+..+++++..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 3456777888999999999999999999964
No 403
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=30.28 E-value=70 Score=28.38 Aligned_cols=58 Identities=16% Similarity=0.109 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHH-HccCHHHHHHHHHHHHhh
Q 013843 334 YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCL-KLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 334 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~~ 396 (435)
-+.|...|++|+++.....+. .-.+.++..+.+|.+..|+ -+++.++|+..+++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~-----~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEK-----YPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-----GGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCC-----CCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 366888999998765322200 0123456667778877766 489999999999999865
No 404
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=30.18 E-value=81 Score=30.21 Aligned_cols=102 Identities=12% Similarity=0.094 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH----------hccCCC----CCh---HH--HHH---------HHHHHHHH
Q 013843 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADC----------VSEDGS----FVD---DE--QKL---------VKSLRVSC 369 (435)
Q Consensus 318 a~~~~~~g~~~~~~g~y~~A~~~y~~al~~----------~~~~~~----~~~---~~--~~~---------~~~~~~~~ 369 (435)
..-+.++++.+.+.++|.+|...+..+..+ .+.+.. ..+ ++ ... .......+
T Consensus 11 ~~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~l 90 (428)
T 2wm9_A 11 KTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMEL 90 (428)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHH
Confidence 345677888899999999999887644331 111100 000 00 000 11222334
Q ss_pred HhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHH
Q 013843 370 WLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILA 420 (435)
Q Consensus 370 ~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA 420 (435)
+...+..+.+-+.|+.|+..|+.++..--.+ .-|-.++.+|..+.++-+.
T Consensus 91 l~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~-~dy~~Ls~~~~~~a~~y~~ 140 (428)
T 2wm9_A 91 LEQCADGLWKAERYELIADIYKLIIPIYEKR-RDFERLAHLYDTLHRAYSK 140 (428)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHTTTHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHH
Confidence 5455556667777999999999888653322 4566677777766554333
No 405
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=29.80 E-value=2.3e+02 Score=27.23 Aligned_cols=83 Identities=8% Similarity=-0.051 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHccCHHHHHHHHHH
Q 013843 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSK 392 (435)
Q Consensus 313 ~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 392 (435)
.+....--....-..||+.++...|...++.. +.....+.++ . -.....+..++.+|..++-..+|.+|..++..
T Consensus 171 kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i-~~~~~~p~~~--~--~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~ 245 (455)
T 3t5v_B 171 KQRILLYLVNKLNNIYFRIESPQLCSNIFKNF-QPKSMLAHFN--E--YQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNE 245 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTH-HHHCCCSCGG--G--SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHcCCHHHHHHHHHHh-ccCCCCcChh--h--CCccceEeeeHHHHHHHHHHccHHHHHHHHHH
Confidence 34444444455567899999999888877543 3322111110 0 11234567789999999999999999999999
Q ss_pred HHhh-CCCC
Q 013843 393 VLDC-DCHN 400 (435)
Q Consensus 393 al~~-~p~~ 400 (435)
|+.. .|..
T Consensus 246 A~~~lcp~~ 254 (455)
T 3t5v_B 246 AFQSLLNLP 254 (455)
T ss_dssp HHHHHHHCC
T ss_pred HHHhcCCcc
Confidence 9998 7755
No 406
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=29.13 E-value=1.1e+02 Score=29.47 Aligned_cols=30 Identities=10% Similarity=-0.147 Sum_probs=26.1
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
..++.-+|.+|+.+++|++|+.++++++..
T Consensus 191 ~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 191 DVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 456778889999999999999999999864
No 407
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=32.91 E-value=13 Score=38.04 Aligned_cols=53 Identities=19% Similarity=0.157 Sum_probs=46.7
Q ss_pred HHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHHH
Q 013843 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILA 420 (435)
Q Consensus 368 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~eA 420 (435)
...+.+|...+..|+|.-|.+.++.++..+|+|..|...+|.+|.++|.-.+.
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 33567788888999999999999999999999999999999999999976554
No 408
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=26.74 E-value=2.8e+02 Score=23.22 Aligned_cols=37 Identities=11% Similarity=0.068 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccC
Q 013843 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSED 351 (435)
Q Consensus 315 ~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~~ 351 (435)
-+.+.-++=.|..++.+++|.+|.+.+.+|++..|..
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 4567778889999999999999999999999987653
No 409
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=26.58 E-value=4.1e+02 Score=25.62 Aligned_cols=88 Identities=17% Similarity=0.006 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHcc------------------------CHHHHHHHHH
Q 013843 336 RAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK------------------------DYQGAIELCS 391 (435)
Q Consensus 336 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~------------------------~~~~A~~~~~ 391 (435)
.+|...+.+|+..+.. .++ + . ..+...+++-||.+|+.+= =|+..+.+++
T Consensus 104 ~~I~~aN~~i~~i~~~--~~~-~--~-~~~~gEA~flRA~~Yf~Lv~~fG~VPl~~~~~~~~~~R~s~~evy~~I~~DL~ 177 (527)
T 3ckc_A 104 YDITQYNFFLDQTEGM--TDA-E--T-LRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELN 177 (527)
T ss_dssp HHHHHHHHHHHHSTTC--CSH-H--H-HHHHHHHHHHHHHHHHHHHHHHSEEEECSSCSSSCCEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhc--cCh-H--H-HHHHHHHHHHHHHHHHHHHHHhCCCCccCCccccCCCcCCHHHHHHHHHHHHH
Confidence 4566667777655433 222 1 1 4555666666666665421 1567788888
Q ss_pred HHHhhCCCC----------HHHHHHHHHHHHhc------ccHHHHHHHHHHHHH
Q 013843 392 KVLDCDCHN----------VKALYRRAQAYMEI------ADLILAELDIKKAIE 429 (435)
Q Consensus 392 ~al~~~p~~----------~~a~~~~a~~~~~l------g~~~eA~~~~~~al~ 429 (435)
.|+..-|.. .-|+-.+|++|+.. ++|++|.+..++++.
T Consensus 178 ~A~~~Lp~~~~~~~gr~tk~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 178 EIEADMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp HHGGGSCCTTCSCTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred HHHHhCccCCCCCCCcHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 888765531 35677788888865 899999999999885
No 410
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=26.43 E-value=14 Score=35.81 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhcc
Q 013843 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (435)
Q Consensus 313 ~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~~~ 350 (435)
+.++.+..+..+|..+-+.|+|++|+.+|.++++.+-.
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 35667888889999999999999999999999997644
No 411
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=25.97 E-value=3e+02 Score=23.21 Aligned_cols=83 Identities=6% Similarity=0.079 Sum_probs=55.0
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHc--c-CHHHHHHHHHHHHhhC--CCCHHHHHHHHHHHHh
Q 013843 339 KKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL--K-DYQGAIELCSKVLDCD--CHNVKALYRRAQAYME 413 (435)
Q Consensus 339 ~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--~-~~~~A~~~~~~al~~~--p~~~~a~~~~a~~~~~ 413 (435)
..+++++.....+....++.. |+.+-.-|..+ . +...+.+.|....... -..+..|-..|..+..
T Consensus 58 ~lLErc~~~F~~~~rYkND~R----------YLklWl~Ya~~~~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~ 127 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPR----------FLKIWIWYINLFLSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLEN 127 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHH----------HHHHHHHHHHhhcccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 567777776655543322221 33333334433 3 3667888888777654 4556667778888999
Q ss_pred cccHHHHHHHHHHHHHhC
Q 013843 414 IADLILAELDIKKAIEAD 431 (435)
Q Consensus 414 lg~~~eA~~~~~~al~l~ 431 (435)
.|++.+|.+.|+++++-.
T Consensus 128 ~g~~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 128 AQFFLEAKVLLELGAENN 145 (202)
T ss_dssp TTCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHcC
Confidence 999999999999998753
No 412
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=25.56 E-value=1.5e+02 Score=28.92 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=25.9
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
..++.-+|.+|+.+++|++|+..+++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456777888999999999999999999964
No 413
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=24.32 E-value=3.3e+02 Score=23.19 Aligned_cols=66 Identities=12% Similarity=0.122 Sum_probs=43.1
Q ss_pred HHHHHhHHHHHHHHccCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHHH--HHHHHHHHHHhCC
Q 013843 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLIL--AELDIKKAIEADP 432 (435)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~e--A~~~~~~al~l~P 432 (435)
+...+..+..+.+. .+-..|+.+|..||..+|.++.-.+..-..|...-+-|. .+..|+.+...||
T Consensus 92 L~etH~~RV~a~Ln-~rrr~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~dp 159 (219)
T 3pmr_A 92 LVETHATRVIALIN-DQRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDP 159 (219)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCH
Confidence 33445555444433 345789999999999999887666655555554433333 6777877777776
No 414
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=24.19 E-value=1.7e+02 Score=27.40 Aligned_cols=62 Identities=13% Similarity=0.047 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHhccCCCCChHHHHHHHHHH-----HHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLR-----VSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~-----~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
.++..+|.+|.+........-...|...-..+ +.+++..|......+++.+|+..++.|.+.
T Consensus 216 ~q~~~~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 216 YETANFYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 34557788888776532211123343333333 555666666677788888888888877654
No 415
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=23.88 E-value=1.5e+02 Score=23.84 Aligned_cols=22 Identities=14% Similarity=0.320 Sum_probs=19.0
Q ss_pred cchHHHhccccCCcEEEEEEEcCC
Q 013843 103 TGLDNGIITMKKRECAVFTFTLPS 126 (435)
Q Consensus 103 ~g~~~~l~~m~~G~~~~~~~~ip~ 126 (435)
.-+..||.|.++||.+.+ ..|.
T Consensus 122 SPlg~ALlGk~vGD~v~v--~~P~ 143 (158)
T 2p4v_A 122 SPMARALLKKEVGDLAVV--NTPA 143 (158)
T ss_dssp SHHHHHSTTCCTTCEEEE--ECSS
T ss_pred CHHHHHhcCCCCCCEEEE--EcCC
Confidence 448899999999999999 7774
No 416
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=23.83 E-value=1.9e+02 Score=22.86 Aligned_cols=39 Identities=15% Similarity=0.015 Sum_probs=34.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 013843 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (435)
Q Consensus 310 ~~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~~ 348 (435)
+..--+..+..+...|..+...|+.+.|--+|.+.+.+.
T Consensus 34 pl~~y~rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~ 72 (144)
T 2a9u_A 34 STKSYVHSALKIFKTAEECRLDRDEERAYVLYMKYVTVY 72 (144)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 444567889999999999999999999999999987765
No 417
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=22.94 E-value=1.1e+02 Score=29.53 Aligned_cols=47 Identities=17% Similarity=-0.009 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhhCCC-------------CHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 013843 383 YQGAIELCSKVLDCDCH-------------NVKALYRRAQAYMEIADLILAELDIKKAIE 429 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~-------------~~~a~~~~a~~~~~lg~~~eA~~~~~~al~ 429 (435)
|+..+.+++.|+.+-|. ..-|+-.+|++|+.+++|++|.+..++++.
T Consensus 160 y~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 160 YQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 56677777777764332 125678899999999999999999999875
No 418
>3iv0_A SUSD homolog; NP_809186.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.31 E-value=5.2e+02 Score=24.72 Aligned_cols=46 Identities=7% Similarity=-0.173 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhh------CCCC-------------HHHHHHHHHHHHhccc---------HHHHHHHHHHHH
Q 013843 383 YQGAIELCSKVLDC------DCHN-------------VKALYRRAQAYMEIAD---------LILAELDIKKAI 428 (435)
Q Consensus 383 ~~~A~~~~~~al~~------~p~~-------------~~a~~~~a~~~~~lg~---------~~eA~~~~~~al 428 (435)
|+..+.+++.|+.. -|.. .-|+-.+|++|+.++. |++|.+..++++
T Consensus 166 y~~I~~DL~~A~~~~~~~~~Lp~~~~~~~~~~gR~tk~aA~allarvyL~~~~~~~~~~~~~~~~a~~~a~~vi 239 (481)
T 3iv0_A 166 LQNCLADLQPLLDDDPGAEVLPWSYSSYSSKGIRASRGSVIALMMHINLWLVQFDAQNKEQYYRNVVSLGEELE 239 (481)
T ss_dssp HHHHHHHHHHHHHTCTTSCSSCSCCSSTTTTTTSCCHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcccccccCCCccccCcccCCccCHHHHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHH
Confidence 67788889999887 4421 1456677888876654 788888887776
No 419
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=22.25 E-value=1.9e+02 Score=21.75 Aligned_cols=37 Identities=27% Similarity=0.197 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 013843 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADC 347 (435)
Q Consensus 311 ~~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~ 347 (435)
....++++......|..++..|.|+.|.-+..+|++.
T Consensus 4 ~~~wl~~A~~dL~~A~~~~~~g~y~~a~f~aqQa~Ek 40 (122)
T 1wol_A 4 VEDWIKQAERDLEEARYAKSGGYYELACFLSQQCAEK 40 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 3456788999999999999999999888877777664
No 420
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=22.07 E-value=2e+02 Score=20.88 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=24.3
Q ss_pred cCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHhcccHH
Q 013843 381 KDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLI 418 (435)
Q Consensus 381 ~~~~~A~~~~~~al~~~p~~~~a~~~~a~~~~~lg~~~ 418 (435)
++...++....++|+.+|+|+.++ |.....+++|.
T Consensus 30 ~~~~~~l~~Al~~L~~~psNPa~L---Ae~Qa~lseyn 64 (92)
T 2g0u_A 30 KDLNKQLQDAQANLTKNPSDPTAL---ANYQMIMSEYN 64 (92)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHH---HHHHHHHHHHH
Confidence 456777788888889999999875 44444444443
No 421
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=22.01 E-value=1.9e+02 Score=28.33 Aligned_cols=30 Identities=10% Similarity=0.259 Sum_probs=25.4
Q ss_pred HHHHhHHHHHHHHccCHHHHHHHHHHHHhh
Q 013843 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (435)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 396 (435)
..++.-+|.+|+-.++|++|...+++++..
T Consensus 198 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 198 QAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 456677788888889999999999999964
No 422
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.72 E-value=1.7e+02 Score=28.25 Aligned_cols=48 Identities=13% Similarity=-0.148 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhhCCCC-----------------------HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q 013843 383 YQGAIELCSKVLDCDCHN-----------------------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (435)
Q Consensus 383 ~~~A~~~~~~al~~~p~~-----------------------~~a~~~~a~~~~~lg~~~eA~~~~~~al~l 430 (435)
|+..+.+++.|+..-|.. .-|+..+|++|+.+++|++|.+..++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 566777788887754421 246778999999999999999999999864
No 423
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=21.62 E-value=2.2e+02 Score=20.61 Aligned_cols=56 Identities=11% Similarity=0.000 Sum_probs=40.6
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHhhCCCCH----HHHHHHHHHH--HhcccHHHHHHHHHHHHH
Q 013843 372 NSAACCLKLKDYQGAIELCSKVLDCDCHNV----KALYRRAQAY--MEIADLILAELDIKKAIE 429 (435)
Q Consensus 372 nla~~~~~~~~~~~A~~~~~~al~~~p~~~----~a~~~~a~~~--~~lg~~~eA~~~~~~al~ 429 (435)
..|..++..++|-+|-+.++.+-...|... +++.++|.++ ...|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 456667777999999999999888776532 4455555544 456777 9999999887
No 424
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=21.22 E-value=1.7e+02 Score=28.55 Aligned_cols=33 Identities=21% Similarity=0.403 Sum_probs=22.7
Q ss_pred HHHHHHHHHhHHHHHHHHccCHHHHHHHHHHHHh
Q 013843 362 VKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (435)
Q Consensus 362 ~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 395 (435)
...+++.+|++. .+|...++|++|+..+++++.
T Consensus 190 A~allarvyL~~-~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 190 ASALLARMYLNA-EIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHHTH-HHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hhccChhHHHHHHHHHHHHHh
Confidence 444455555543 234467899999999999985
No 425
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=21.17 E-value=2.6e+02 Score=26.06 Aligned_cols=30 Identities=13% Similarity=-0.039 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q 013843 399 HNVKALYRRAQAYMEIADLILAELDIKKAI 428 (435)
Q Consensus 399 ~~~~a~~~~a~~~~~lg~~~eA~~~~~~al 428 (435)
.+.--|..+|-.+++.+++.+|++.+-.|-
T Consensus 294 ~HvYPYtylgGy~yR~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 294 HHIYPYTYLGGYYYRKKKYYEAIASWVDAG 323 (472)
T ss_dssp CCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCccchhhhhhhhhhcchHHHHHHHHHHHH
Confidence 345556666667777777777776665543
No 426
>1ufb_A TT1696 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.90A {Thermus thermophilus} SCOP: a.24.16.3
Probab=20.31 E-value=1.9e+02 Score=21.84 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 013843 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADC 347 (435)
Q Consensus 312 ~~~~~~a~~~~~~g~~~~~~g~y~~A~~~y~~al~~ 347 (435)
...++++......|...+..|.|+.|.-...+|++.
T Consensus 5 ~~w~~~A~~~L~~A~~~~~~g~y~~a~f~a~qa~Ek 40 (127)
T 1ufb_A 5 RDWLEQARHNLRHAQGSLGLGDYAWACFAAQQAAEA 40 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 456788889999999999999999888777777663
Done!