BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013845
(435 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 223/361 (61%), Gaps = 13/361 (3%)
Query: 41 RSESKNYAIKCTQSDSF----YSTNKIKNNENTSSRNCKPFNK--YRVAVTLQQQGCASN 94
S S+ ++C S + N ++ + SS P +K +RV T Q +
Sbjct: 27 HSLSEIRVLRCDSSKVVAKPKFRNNLVRPDGQGSSLLLYPKHKSRFRVNATAGQPEAFDS 86
Query: 95 NEDDINSTSFWDVLLKKLHALYVFTRPFAMIGTIVGITSIAILPLQSFADLTPKYFMEFL 154
N SF D L A Y F+RP +IGT++ I S++ L ++ +D++P F L
Sbjct: 87 NSKQ---KSFRD----SLDAFYRFSRPHTVIGTVLSILSVSFLAVEKVSDISPLLFTGIL 139
Query: 155 KALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIAL 214
+A+++A++MN Y+ +NQ++DVEIDKVNKP LPLASG+ S+ TG+AI + S+ S +
Sbjct: 140 EAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSIMSFWLGW 199
Query: 215 SLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 274
+ S PL + L V F+LGTAYS++LP LRWK +A MC++ V ++ Q +F++H Q +
Sbjct: 200 IVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYLHIQTH 259
Query: 275 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCV 334
V GRP++ TRPLIFA A +S S V++L KDIPD +GDK FG +S S LG++ V CV
Sbjct: 260 VFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRVFWTCV 319
Query: 335 YALFFAYGVSVIVGASSSFQLVKLVSIIGHSTLAFLLWLRAQTVDLSNNASTYSFYMFIW 394
L AY V+++VGA+S F K++S++GH LA LW RA++VDLS+ S YMFIW
Sbjct: 320 TLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEITSCYMFIW 379
Query: 395 K 395
K
Sbjct: 380 K 380
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 275 bits (704), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/365 (38%), Positives = 224/365 (61%), Gaps = 5/365 (1%)
Query: 31 PLTKVHGGLNRSESKNYAIKCTQSDSFYSTNKIKNNENTSSRNCKPFNKYRVAVTLQQQG 90
PL +H R S + + TQ SF K +++ R P + Q
Sbjct: 32 PLCSIHRNGKRPVSLSS--QRTQGPSFDQCQKFFGWKSSHHR--IPHRPTSSSADASGQP 87
Query: 91 CASNNEDDINSTSFWDVLLKKLHALYVFTRPFAMIGTIVGITSIAILPLQSFADLTPKYF 150
S+ E +S+S W + L A Y F+RP +IGT + I S+++L +++ +D++P +
Sbjct: 88 LQSSAEAH-DSSSIWKPISSSLDAFYRFSRPHTVIGTALSIVSVSLLAVENLSDVSPLFL 146
Query: 151 MEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSL 210
L+A+++A+ MN Y+ +NQ+ D+EIDKVNKP LPLASG+ S TG+A+ + S
Sbjct: 147 TGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPATGVALVSAFAAMSF 206
Query: 211 AIALSLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIH 270
+ ++ S PL L + F+LGTAYS++LPFLRWK +A +C++ V ++ Q +FF+H
Sbjct: 207 GLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQLAFFLH 266
Query: 271 FQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVL 330
Q +V RP V TRPLIFA A ++ S V++L KDIPD +GD+ FG +S S +LG++ V
Sbjct: 267 IQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLGQKKVF 326
Query: 331 RLCVYALFFAYGVSVIVGASSSFQLVKLVSIIGHSTLAFLLWLRAQTVDLSNNASTYSFY 390
+CV L AY V++++GA+S+ K +++GH+ LA +LW R++++DL++ + SFY
Sbjct: 327 WICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSRSIDLTSKTAITSFY 386
Query: 391 MFIWK 395
MFIWK
Sbjct: 387 MFIWK 391
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 244 bits (624), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 202/345 (58%), Gaps = 5/345 (1%)
Query: 58 YSTNKIKNNENTSSRNCKPFNKYRVAVTLQQQGCASNNEDDINSTSFWDVLLKKLHALYV 117
Y N+ + NTS + C+ KY V +Q D S WD + L Y
Sbjct: 65 YKVNEGGSTSNTS-KECE--KKYVVNAISEQSFEYEPQTRD--PESIWDSVNDALDIFYK 119
Query: 118 FTRPFAMIGTIVGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGTVNQVADVE 177
F RP+AM ++G T +++ ++ +DL+ +F+ +L+ +++ + ++ + +NQ+ D+E
Sbjct: 120 FCRPYAMFTIVLGATFKSLVAVEKLSDLSLAFFIGWLQVVVAVICIHIFGVGLNQLCDIE 179
Query: 178 IDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGTAYSV 237
IDK+NKPDLPLASG LS + IT + + L A + S PL + + + ++ +AY+V
Sbjct: 180 IDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAWIVDSWPLFWTVFISCMVASAYNV 239
Query: 238 DLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTIS 297
DLP LRWK P L + + + FF+H Q V RP RPLIF AI+S +
Sbjct: 240 DLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTAIVSIYA 299
Query: 298 AVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVIVGASSSFQLVK 357
V++L KDIPD +GD++FG QS+S +LG + V +CV L YGV+++VGA+S K
Sbjct: 300 IVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICVSLLEMTYGVTILVGATSPILWSK 359
Query: 358 LVSIIGHSTLAFLLWLRAQTVDLSNNASTYSFYMFIWKASVIDLF 402
+++++GH+ LA +LW A++VDL++N +SFYMFIWK + F
Sbjct: 360 IITVLGHAVLASVLWYHAKSVDLTSNVVLHSFYMFIWKLHTAEYF 404
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 175/296 (59%)
Query: 100 NSTSFWDVLLKKLHALYVFTRPFAMIGTIVGITSIAILPLQSFADLTPKYFMEFLKALLS 159
N + D + L A Y F+ P+ MIG + S ++L ++ +D++ + + L+ +L
Sbjct: 101 NPKNILDSVKNVLSAFYWFSYPYTMIGITLCAFSSSLLAVEKLSDISLSFLIGVLQGVLP 160
Query: 160 AVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSP 219
+ + Y+ VNQ+ D+EIDK+NKP LP+ASG S TG+ I+ S S
Sbjct: 161 QLFIEIYLCGVNQLYDLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWITGSW 220
Query: 220 PLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRP 279
PLI L+V TAYS+D+P LRWK PF+A MCM++ + L S+F H Q VL RP
Sbjct: 221 PLICNLVVIASSWTAYSIDVPLLRWKRYPFVAAMCMISTWALALPISYFHHMQTVVLKRP 280
Query: 280 VVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFF 339
+ R L F A ++ S ++L KDIPD +GDK+ G S + +LG++ +CV
Sbjct: 281 IGFPRSLGFLVAFMTFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKRAFWICVSFFEM 340
Query: 340 AYGVSVIVGASSSFQLVKLVSIIGHSTLAFLLWLRAQTVDLSNNASTYSFYMFIWK 395
A+GV ++ GAS S K+ + +G++ LA +LW +A++VDLS+ AST SFYMFIWK
Sbjct: 341 AFGVGILAGASCSHFWTKIFTGMGNAVLASILWYQAKSVDLSDKASTGSFYMFIWK 396
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 160/322 (49%), Gaps = 15/322 (4%)
Query: 78 NKYRVAVTLQQQGCASNNEDDINSTSFWDVLLKKLHALYVFTRPFAMIGTIVGITSIAIL 137
N ++++ Q A+ ++D + D + + +A + F RP + GT +G T++
Sbjct: 62 NYRKISIRACSQVGAAESDDPV-----LDRIARFQNACWRFLRPHTIRGTALGSTALVTR 116
Query: 138 PLQSFADLTP-KYFMEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMG 196
L L ++ L LL+ + N Y+ +NQ+ D+ IDKVNKP LP+A+GDLS+
Sbjct: 117 ALIENTHLIKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQ 176
Query: 197 TGLAITLTLSLTSLAIALSLQSPPLIFGLI-VWFLLGTAYSVDLPFLRWKTKPFLAGMCM 255
+ + + ++ L + + P I L + LGT YSV P LR K P A + +
Sbjct: 177 SAWLLVIFFAIAGL-LVVGFNFGPFITSLYSLGLFLGTIYSV--PPLRMKRFPVAAFLII 233
Query: 256 VTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQF 315
TV G + F + H + LG P + P+ F + ++ + V+++ KD+PD +GD++F
Sbjct: 234 ATVRGFLLNFGVY-HATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKF 292
Query: 316 GFQSISSKLGKENVLRLCVYALFFAYGVSVIVGASSSFQLVK-LVSIIGHSTLAFLLWLR 374
++++KLG N+ L L Y VS I A Q+ + + I H LA L +
Sbjct: 293 QISTLATKLGVRNIAFLGSGLLLVNY-VSAISLAFYMPQVFRGSLMIPAHVILASGLIFQ 351
Query: 375 AQTVDLSN--NASTYSFYMFIW 394
++ +N + +Y FIW
Sbjct: 352 TWVLEKANYTKEAISGYYRFIW 373
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 10/284 (3%)
Query: 116 YVFTRPFAMIGTIVGITSIAILPLQSFADLTPKYFM-EFLKALLSAVLMNNYVGTVNQVA 174
+ F RP + GT +G ++ L L + + + L++ + N Y+ +NQ+
Sbjct: 88 WRFLRPHTIRGTALGSIALVARALIENPQLINWWLVFKAFYGLVALICGNGYIVGINQIY 147
Query: 175 DVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGTA 234
D+ IDKVNKP LP+A+GDLS+ T + + + +I ++ P + + LGT
Sbjct: 148 DIRIDKVNKPYLPIAAGDLSVQTAWLLVVLFAAAGFSIVVTNFGPFITSLYCLGLFLGTI 207
Query: 235 YSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIIS 294
YSV P R K P A + + TV G + F + + + LG + P+ F ++
Sbjct: 208 YSV--PPFRLKRYPVAAFLIIATVRGFLLNFGVY-YATRAALGLTFQWSSPVAFITCFVT 264
Query: 295 TISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVIVGASSSFQ 354
+ V+++ KD+PD +GD+++ ++++KLG N+ L L Y ++ V
Sbjct: 265 LFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAFLGSGLLIANYVAAIAVAFLMPQA 324
Query: 355 LVKLVSIIGHSTLA----FLLWLRAQTVDLSNNASTYSFYMFIW 394
+ V + H+ LA F W+ Q + S Y Y FIW
Sbjct: 325 FRRTVMVPVHAALAVGIIFQTWVLEQAKYTKDAISQY--YRFIW 366
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 24/218 (11%)
Query: 109 LKKLHALYVFTRPFAMIGTIVGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVG 168
+ KL A +RP + +I+G L + + T Y + A L L+
Sbjct: 1 MGKLGAYVEISRPKNALMSILG-------TLTGWVNSTSVYDGRLILACLIPPLVLMAGN 53
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 228
+N D EID +NKP P+ SG +S L I + LSL IALS IF +
Sbjct: 54 AINDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSL--FGIALS------IFLGFIE 105
Query: 229 FLLGTAYSVD-LPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLI 287
FL+ TA+S+ + RW + + G +V++ +F + F G +T +I
Sbjct: 106 FLIVTAFSLSWYAYARWLKRTGVPGNALVSL-----GVAFTLIFGSLAAGN---LTNKVI 157
Query: 288 FAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLG 325
+++ T + + +K + D GD+ G ++I+ ++G
Sbjct: 158 IFSSVAFTSNLIREFVKAVEDLPGDRAHGVRTIAVRIG 195
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 118 FTRPFAMIGTIVGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGTVNQVADVE 177
TRP + + G+T++ I L + LTP + L +++ + V +N V DVE
Sbjct: 9 ITRPHNAV--VAGLTAL-IGYLIATGTLTPPSLL--LAVIVALITAGGNV--INDVRDVE 61
Query: 178 IDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGTAYSV 237
ID++N+PD P+ +GD+S+ A L + +AIA + L +I +L Y+V
Sbjct: 62 IDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIATLTTTLCLAIAIINSVIL-IVYAV 120
Query: 238 DLPFLRWKTKPFLAGMCMVTVFGLVYQF-SFFIHFQKYVLGRPVVITRPLIFAA-AIIST 295
R K P L + + + G V+ F F + V R L AA ++T
Sbjct: 121 -----RLKRTPVLGNVAVAYLAGSVFLFGGAFAGIEGLV--------RNLSLAAITFLAT 167
Query: 296 ISAVMSLLKDIPDEDGDKQFGFQSISSKLG 325
I+ LLKD D DGD G +++ +G
Sbjct: 168 IA--RELLKDAEDVDGDAAGGARTLPMIVG 195
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 128 IVGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLP 187
+ G S+ I P + K+ + L +L+ L+ N D +D VN+PD P
Sbjct: 35 LCGTVSVGIWPGE-------KWPLVLLGMVLAGPLVCGMSQAANNWCDRHVDAVNEPDRP 87
Query: 188 LASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGT-AYSVDLPFLRWKT 246
+ SG + GL I L +++ SLA+ L P FG V+ +L AYSV+ L+ ++
Sbjct: 88 IPSGRIPGRWGLYIALLMTVLSLAVGWMLG--PWGFGATVFGVLAAWAYSVEPIRLK-RS 144
Query: 247 KPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRP--VVITRPLIFAAAIISTISAVMSLLK 304
+ G+ + GL +F G P ++T L++A ++ L
Sbjct: 145 GWWGPGLVALCYEGL----PWFTGAAVLSAGAPSFFIVTVALLYAFGAHGIMT-----LN 195
Query: 305 DIPDEDGDKQFGFQSISSKLGKENVLRL 332
D +GD+Q G +S+ LG E +L
Sbjct: 196 DFKALEGDRQHGVRSLPVMLGPEVAAKL 223
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 145 LTPKYFMEFLKALLSAVLMN-----NYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGL 199
++ ++++E LLSA+++ YV +N V DVEIDK+NKP P+ SG +S+
Sbjct: 28 VSSQWYLELKGILLSALVVGLIAAGGYV--INDVYDVEIDKINKPYRPIPSGKISVNKAK 85
Query: 200 AITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVF 259
A+++ L + +A+++ L L+ L+ L Y+ DL K F + + T
Sbjct: 86 ALSIALFIIGIALSILLNIYALVIALVTAIGL-IYYAKDL-----KKTGFYGNLLVATTT 139
Query: 260 GLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQS 319
L + F L R ++ T F ++ + ++K I D +GD ++
Sbjct: 140 ALSIFYGGLAFFSDNWLLRIIIPTLYAFF-------LTLIREIVKGIEDYNGDSLNNVKT 192
Query: 320 ISSKLGKENVLRLC 333
+++ LG R+
Sbjct: 193 LATTLGINKSWRIA 206
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 113/244 (46%), Gaps = 26/244 (10%)
Query: 146 TPKYFMEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTL 205
TP +F+ L ++S + YV +N V D+E+DK+NKP+ PL SG +++ ++ L
Sbjct: 35 TPLFFLPLL--VVSLIAAGGYV--INDVYDIEVDKINKPERPLPSGRIAVNIARRFSIVL 90
Query: 206 SLTSLAIALSLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQF 265
L I++ L P F LI LL + R K L G +V + + +
Sbjct: 91 FAVGLIISIPLGLIPFGFALITIVLL-------YEYARSLKKLGLVGNFIVALTSALSAY 143
Query: 266 SFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLG 325
+ +LG ++ T + F T+S +K I D +GDK+ G +++ KLG
Sbjct: 144 YGGLA-SGSLLGNFIIPTIYIFF-----FTLSR--EFVKGIEDIEGDKRNGVNTLAVKLG 195
Query: 326 KEN---VLRLCVYALFFAYGVSVIVGASSSFQLVKLVSIIGHSTLAFLLWLRAQTVDLSN 382
+++ + ++ + L F + +G F ++ L+ I+ L + + T++ +
Sbjct: 196 EKSTWIIAKIILGILIFTSPLPYFLG----FNVIYLIGILALDVLLVYILILHNTIESAT 251
Query: 383 NAST 386
A +
Sbjct: 252 KARS 255
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTS--LAIALSLQSPPLIFGLI 226
T+N D EID++N P+ P+ SG + + L +L L L S L +SL++ ++ I
Sbjct: 50 TINDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFIISLENGIVV---I 106
Query: 227 VWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQ---KYVLGRPVVIT 283
+ +L Y+ DL K + F+ +C+ + GL + F I ++LG
Sbjct: 107 LCTILMIIYAYDL-----KQRCFIGNLCVAILTGLTFVFGGLITKDVNLGFILG------ 155
Query: 284 RPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCV 334
A + T+S ++KDI D +GDK+ ++ G + + L V
Sbjct: 156 -----FFAFLMTLSR--EIIKDIEDIEGDKKEDAHTLPIIYGTKKAVMLAV 199
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 50/212 (23%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLS-----------MGTGLAITLTLSLTSLAIALSLQ 217
+N D+EIDKVN+PD P+ SG +S G+A ++ LAIAL
Sbjct: 53 VLNDYFDLEIDKVNRPDRPIPSGKVSPKGAVVWAGILFAAGVAAACFTNIWCLAIAL--- 109
Query: 218 SPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQF-SFFIHFQKYVL 276
V +L Y+ ++K PFL + + + G ++ F F + + +++
Sbjct: 110 ---------VNVVLLIIYAA-----KFKGIPFLGNLSVAYLSGSIFLFGGFLVGPESFLV 155
Query: 277 GRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLG--KENVLR--- 331
P +FA T++ LLKD D +GD+ G +++ ++G K +VL
Sbjct: 156 MLP-------LFAITFFGTLA--RELLKDAEDIEGDRLGGARTLPMQIGVRKTSVLAVIF 206
Query: 332 -----LCVYALFFAYGVS--VIVGASSSFQLV 356
LC + F +GV V++G +F L+
Sbjct: 207 VLFAVLCSFVPFLTWGVVYLVLIGVVDAFILL 238
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 28/198 (14%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 228
T+N D EID++N+P+ PL G + T L +L L LA+AL + F L+ +
Sbjct: 55 TINDYFDYEIDRINRPERPLPRGAMDRRTALWYSLFLFAVGLALALLISLKAFAFALLAY 114
Query: 229 FLLGTAYSVDLPFLRWKTK--PFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPL 286
+ + WK K PF+ + + + G+ + I K L + + L
Sbjct: 115 --------ITMFLYAWKLKPLPFIGNIAVAALTGVTPLYG-AIAVGKIGLAGTLAVCAFL 165
Query: 287 IFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVI 346
++ ++KDI D +GD + G +++ LG+ R Y F +GV+ +
Sbjct: 166 ---------VNVAREIVKDIEDVEGDLKKGAKTLPIILGR----RKAAYVAAF-FGVATV 211
Query: 347 VGASSSFQLVKLVSIIGH 364
+ +SF VK +G+
Sbjct: 212 I---ASFLPVKAGVGVGY 226
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 111 KLHALYVFTRPF-AMIGTIVGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGT 169
+L A TRP ++ IVG+ +I+ L F D PK + + N T
Sbjct: 2 ELKAFIEITRPHNCILAGIVGLLG-SIVALGHFPD--PKTALLIFLVVTVGCAGGN---T 55
Query: 170 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWF 229
+N D EIDK+N+P+ PL G +MG +A+ ++ L ++ +AL+ I F
Sbjct: 56 INDYFDYEIDKINRPERPLPRG--AMGRKVALYYSMLLFAVGLALAYMIN------IYAF 107
Query: 230 LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFA 289
+LG V + WK KP L + + V GL + LG + L
Sbjct: 108 ILGVIAYVTMFIYAWKLKP-LPFVGNIVVAGLTGATPLYGAVAVEHLG----LAGYLAIC 162
Query: 290 AAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 328
A +++ V +KDI D +GD G +++ GK+
Sbjct: 163 AFLVNVAREV---IKDIEDVEGDMAKGAKTLPIIWGKKR 198
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 170 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWF 229
+N D+EIDKVNKP P+ SG +S+ + L +L L +T + +A L +P + G+I F
Sbjct: 62 LNDYFDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAF-LVNP--LCGIIALF 118
Query: 230 --LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLI 287
++ Y+ L K PF + + G + F V G + ++
Sbjct: 119 NSMVLILYAQSL-----KRTPFFGNASVGYLTGSTFLFG------GAVFGMAGLQALVVL 167
Query: 288 FAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 328
F A ++TI+ ++KD+ D GDK+ G +++ +G +
Sbjct: 168 FLLATLATIA--REIVKDVEDIVGDKKDGARTLPILIGAKK 206
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 152 EFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLA 211
E + A+L L++ +N V DVEID++NKPD P+ SG +S+ T A +L+ L +
Sbjct: 36 ELILAVLVVALVDAGGNAINDVYDVEIDRINKPDRPIPSGAVSLRT--ATSLSYGLMGVG 93
Query: 212 IALS 215
+ LS
Sbjct: 94 VILS 97
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 170 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWF 229
+N D EIDK+N+P+ PL G LS L ++L ++ IA + IF L +
Sbjct: 56 INDYFDYEIDKINRPNRPLPRGALSKNIALVYGISLGGVAILIAYLINFEAFIFALGAYL 115
Query: 230 LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFA 289
L+ Y+ L K +PF+ + + T+ G+ + + + G +
Sbjct: 116 LM-YLYARKL-----KPQPFIGNLVVATLTGITPIYGAIAVGKIGLAG----------YL 159
Query: 290 AAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 328
A ++ + KDI D +GDK G +++ G E+
Sbjct: 160 ALCAFLVNVAREIFKDIEDIEGDKAQGAKTLPIVWGIES 198
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 25/180 (13%)
Query: 154 LKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIA 213
L A L L+ + +N + D+EIDK+NKP+ PL S +S+ + + L ++ + I+
Sbjct: 43 LLASLIVFLVCGFGNALNDIQDIEIDKINKPNRPLPSNKISLKSATIFSYLLMISGIIIS 102
Query: 214 LSLQSPPLIFGLIVWFLLGTAYSVDLPFL--RWKTKPFLAGMCMVTVFGLVYQFSFFIHF 271
L F +I F + S+ L ++K + + + + G ++ F
Sbjct: 103 L--------FNMI-CFAIALINSIVLYLYAKKYKRNKIIGNLIVAYLTGSIFIFG----- 148
Query: 272 QKYVLGRPV--VITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENV 329
G V V ++F A+ +T S ++KD D DGDK G S+ K GK ++
Sbjct: 149 -----GASVGNVEITLILFLCALFATWSR--EIIKDYEDLDGDKSEGVISLPIKYGKNSI 201
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 170 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGL-IVW 228
+N D ID +N+PD P+ SG +S LA +L L L +A+S+ + PL G+ +V
Sbjct: 54 INDYFDAAIDTINRPDRPIPSGAVSRNAALAWAFSLFL--LGLAVSVFTTPLCMGIALVN 111
Query: 229 FLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIF 288
LL Y+ R K+ PF + + S F+ Y ++ P+
Sbjct: 112 ALLLVLYAA-----RLKSTPFFGNAAVAFL-----SASIFLFGGAYAGWHALLDMLPI-- 159
Query: 289 AAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVI 346
AAI LLKD D +GD+ G +++ ++G + FA S +
Sbjct: 160 -AAITFLAMLARELLKDAEDIEGDRAHGADTLAIRIGVRKTALIAFACTAFAIAASAV 216
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLS-----------MGTGLAITLTLSLTSLAIALSLQ 217
+N D E+D VN+PD P+ SG +S G+ + ++ LAIA +L
Sbjct: 51 AINDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMATVINRMCLAIA-ALN 109
Query: 218 SPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLG 277
S ++ L W L GT P + +L G C + F V
Sbjct: 110 S--VLLYLYSWRLKGT------PLIGNVMVSYLVGSCFL--------------FGAAVGQ 147
Query: 278 RPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYAL 337
RP P ++ + + V +LKD+ D +GD G +++ G+ LR+ A
Sbjct: 148 RPA----PAVWLFLLAFLANLVREILKDLEDVEGDAALGLKTLPIAYGEGVALRV---AT 200
Query: 338 FFAYGVSVI 346
FA ++V+
Sbjct: 201 VFAIALAVL 209
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 228
T+N DVEIDK+N+P+ P+ G ++ + L IAL L +F L +
Sbjct: 55 TINDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAY 114
Query: 229 FLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIF 288
FL Y+ WK KP L + VTV L + +GR + + L
Sbjct: 115 FLT-FVYA-------WKLKP-LPFIGNVTVALLTAATPI---YGAVGVGR-IDLAGYLAI 161
Query: 289 AAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 328
A +++ +M KDI D +GDK+ G +++ +GK+
Sbjct: 162 CAFLVNVSREIM---KDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 159 SAVLMNNYVG-TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQ 217
SAVL+ G +N D EID VN+PD P+ SG +S L ++ L + IA +
Sbjct: 41 SAVLLITGGGNAINDYFDREIDAVNRPDRPIPSGRISPRAALIWSVALFIAGCLIAGLIN 100
Query: 218 SPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLG 277
L L+ F+L Y+ R K P + + + G + F
Sbjct: 101 QSCLALALLNSFVL-IIYAA-----RLKGLPVAGNIAISYLTGTTFLFGGLA-------A 147
Query: 278 RPVVITRPLIFAAAIISTISAVMSL----LKDIPDEDGDKQFGFQSISSKLGKENVLRLC 333
P IT A +S +SA+ +L +KDI D GD G +++ + +GK L
Sbjct: 148 SPSSIT-------AFLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIGKRKSFVLA 200
Query: 334 VYALFFAYGVSVIVGASSSFQLVKLVSIIGHSTLAFLLWLR 374
L A +S +V +Q VSI + LAFLL ++
Sbjct: 201 SLVLIVAMLLSYLVPLGIDYQ--AAVSI---ANLAFLLSIK 236
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 228
T+N DVEID+VN+P+ P+ G + L L + LA+A L L+F L
Sbjct: 55 TINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFAL--- 111
Query: 229 FLLGTAYSVDLPFLRWKTKPF-LAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLI 287
AY++ + WK KP G V + + +GR V + L
Sbjct: 112 ----GAYALTFIY-AWKLKPLPFIGNVAVALLTAATPI-----YGALGVGR-VGLAGYLA 160
Query: 288 FAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 328
A +++ +M KDI D +GD + G +++ +GK
Sbjct: 161 ICAFLVNVSREIM---KDIEDIEGDMKMGAKTLPIIIGKRR 198
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 228
T+N D EIDK+N+P+ PL G +S L ++ L T + +A + +W
Sbjct: 55 TINDYFDYEIDKINRPERPLPRGAMSRKAALWYSVALFATGIVLAWFIN---------IW 105
Query: 229 -FLLGTAYSVDLPFLRWKTK--PFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRP 285
FLL V + WK K PF+ + + ++ G + + + G
Sbjct: 106 DFLLAIVAYVTMFIYAWKLKPMPFIGNVVVASLTGATPLYGAIAVGEIGLAGT------- 158
Query: 286 LIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 328
L A +++ V +KDI D +GD G +++ +G++
Sbjct: 159 LALCAFLVNVAREV---IKDIEDIEGDMAKGAKTLPILIGRKR 198
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 15/172 (8%)
Query: 157 LLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSL 216
++S + Y+ +N V D+EIDK+NKP+ PL SG + + ++++ L L + +++ L
Sbjct: 45 VVSVIAAGGYI--INDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLL 102
Query: 217 QSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVL 276
I L+ L Y+ DL K + + + + L + F+ +
Sbjct: 103 NIYAFIIALLTVLAL-YYYAKDL-----KKQGLVGNLIVALTSALSAFYGGLAFFEGSWV 156
Query: 277 GRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 328
R ++ T + F + +K I D GD G ++++ ++G E
Sbjct: 157 IRTLIPTLYIFF-------FTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEK 201
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 156 ALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
A+++ VL +N D +ID +N+PD P+ G +S A+ +++L ++A+ L+
Sbjct: 42 AVVATVLATGAGNAINDYFDRDIDAINEPDRPIPRGAVSPRG--ALVYSVALFAVAVVLT 99
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPF--LAGMCMVTVFGLVYQFSFFIHFQK 273
L P W + A +++L L T+ F L G+ V L S F++
Sbjct: 100 LLLP--------WLAIAIA-AINLVALVAYTEVFKGLPGVGNALVAYL--TGSTFLYGGA 148
Query: 274 YVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVL 330
V G + ++FA A +T++ ++KD+ D DGD+ G +++ +G+ L
Sbjct: 149 AVGGDLAAVV--VLFALAACATMA--REIVKDVEDIDGDRAEGLRTLPIVIGERRSL 201
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 18/161 (11%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 228
T N D EIDK+N+P+ PL G +S L L +A L +F I +
Sbjct: 55 TANDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRAFVFATIAY 114
Query: 229 FLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLI 287
FL FL WK KP L + +TV L + +GR + + L
Sbjct: 115 FLT---------FLYGWKLKP-LPLVGNITVAALTAATPIYGAIG---VGR-IGLAGYLA 160
Query: 288 FAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 328
A +++ +M KDI D +GDK G +++ +G++
Sbjct: 161 ICAFLVNVSREIM---KDIEDIEGDKALGARTLPIIIGEKK 198
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 171 NQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFL 230
N D +D +N+P P+ SG + GL I + +SL SL + L S +G + L
Sbjct: 72 NDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVGWQLGS----WGFVA-TL 126
Query: 231 LGTA----YSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITR-P 285
LG A YSV+ L+ +G + GL Y+ +I +L P
Sbjct: 127 LGVAAAWAYSVEPIRLK------RSGWWGPGLVGLAYEGLPWITGAAVLLATADTSPGFP 180
Query: 286 LIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFA 340
++ A + + + + + D +GD++ G +S+ + G E ++ + A
Sbjct: 181 IVMMATLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVMGLA 235
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 87/231 (37%), Gaps = 41/231 (17%)
Query: 123 AMIGTIVGITSIAILPLQSFADLTPKYFMEFLKAL--LSAVLMNNYVGTVNQVADVEIDK 180
A+IGT++ IL + + +P F F L L+ L+ +N DV ID
Sbjct: 24 AIIGTLIAFN---ILTSNAPSSYSPGEFPLFSSVLIFLAVFLVAGAGNAINDYFDVRIDS 80
Query: 181 VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWF----------- 229
+N+PD P+ SG + + L + TL +A S+ I G+I F
Sbjct: 81 INRPDRPIPSGRMKLKEALYFSYTLFALGTLLAFSINP---ICGVIALFNSLVLIFYAKT 137
Query: 230 LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFA 289
L GT +L FL G + + GL F F+ + R +V
Sbjct: 138 LKGTPLLGNLSIGYLTGSSFLFGASVFGLEGLKALFVLFLLAALAITAREIV-------- 189
Query: 290 AAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFA 340
KDI D +GDK G ++ ++G + L F A
Sbjct: 190 --------------KDIEDMEGDKMEGADTLPLRVGAKKASYLAALIGFLA 226
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 75/209 (35%), Gaps = 60/209 (28%)
Query: 157 LLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASG------------------------- 191
L+S + Y T+N D +ID +N+P P+ SG
Sbjct: 132 LMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALL 191
Query: 192 DLSMGTGLAITLTLSLTSLAIALSLQSPPLIF---GLIVWFLLGTAYSVDLPFLRWKTKP 248
D+ G I L+L ++ +PPL G I F LG +Y + L P
Sbjct: 192 DIWAGHDFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASY-IGL--------P 242
Query: 249 FLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPD 308
+ AG + FG +T ++ + S ++++ D
Sbjct: 243 WWAGQAL---FG--------------------TLTPDIVVLTCLYSIAGLGIAIVNDFKS 279
Query: 309 EDGDKQFGFQSISSKLGKENVLRLCVYAL 337
+GD+ G QS+ G E +CV A+
Sbjct: 280 IEGDRTLGLQSLPVAFGMETAKWICVGAI 308
>sp|B0U042|UBIA_FRAP2 4-hydroxybenzoate octaprenyltransferase OS=Francisella philomiragia
subsp. philomiragia (strain ATCC 25017) GN=ubiA PE=3
SV=1
Length = 285
Score = 38.9 bits (89), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 31/259 (11%)
Query: 107 VLLKKLHALYVFTRPFAMIGTIVGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNY 166
++L +LH RP ++ + + +L D+ KY + F + V+M
Sbjct: 11 IMLMRLH------RPIPILLILWPTLTALVLASHGIPDI--KYLIVFT---IGVVVMRTV 59
Query: 167 VGTVNQVADVEIDK-VNKPDL-PLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFG 224
VN +AD++ DK V + + PL SG LS+ L + L L++ + L L ++
Sbjct: 60 GCIVNDIADIDFDKYVERTNTRPLTSGKLSVKNALYLCLALTIIAFICVLFLNLYTILLS 119
Query: 225 LIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVIT 283
+ FL +V PF R+ P L + GL + F F+ F + + +
Sbjct: 120 FVALFL-----AVLYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA--IENQIPLE 165
Query: 284 RPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGV 343
+ + + I TI+ + + D D D + G +S S+ L + V + F + +
Sbjct: 166 AWIFYLSTICWTIA--YDTIYALADRDFDLEIGIKS-SAVLFGDKVFKYIFLFNFISLIL 222
Query: 344 SVIVGASSSFQLVKLVSII 362
+ +G SF ++ + +I
Sbjct: 223 LIALGIYLSFNIIFYIGVI 241
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 60/209 (28%)
Query: 157 LLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASG------------------------- 191
++S + Y T+N D +ID +N+P P+ SG
Sbjct: 141 MMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGIL 200
Query: 192 DLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW---FLLGTAYSVDLPFLRWKTKP 248
D+ G L+L ++ +PPL W F LG +Y + LP+ W
Sbjct: 201 DVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASY-ISLPW--W---- 253
Query: 249 FLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPD 308
AG + FG + P V+ L+++ A + ++++ D
Sbjct: 254 --AGQAL---FGTL---------------TPDVVVLTLLYSIAGLG-----IAIVNDFKS 288
Query: 309 EDGDKQFGFQSISSKLGKENVLRLCVYAL 337
+GD+ G QS+ G E +CV A+
Sbjct: 289 VEGDRALGLQSLPVAFGTETAKWICVGAI 317
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 76/209 (36%), Gaps = 60/209 (28%)
Query: 157 LLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASG------------------------- 191
++S + Y T+N D +ID +N+P P+ SG
Sbjct: 130 IMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALL 189
Query: 192 DLSMGTGLAITLTLSLTSLAIALSLQSPPLIF---GLIVWFLLGTAYSVDLPFLRWKTKP 248
D+ G I L++ ++ +PPL G I F LG +Y + L P
Sbjct: 190 DVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASY-IGL--------P 240
Query: 249 FLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPD 308
+ AG + FG +T ++ ++ S ++++ D
Sbjct: 241 WWAGQAL---FG--------------------TLTPDIVVLTSLYSIAGLGIAIVNDFKS 277
Query: 309 EDGDKQFGFQSISSKLGKENVLRLCVYAL 337
+GD+ G QS+ G E +CV A+
Sbjct: 278 VEGDRALGLQSLPVAFGMETAKWICVGAI 306
>sp|B2SF41|UBIA_FRATM 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. mediasiatica (strain FSC147) GN=ubiA PE=3 SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 158 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 274
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 275 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 327
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|Q2A564|UBIA_FRATH 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. holarctica (strain LVS) GN=ubiA PE=3 SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 158 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 274
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 275 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 327
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|A0Q4X3|UBIA_FRATN 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. novicida (strain U112) GN=ubiA PE=3 SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 158 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 274
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 275 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 327
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYLATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|A4IYU3|UBIA_FRATW 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. tularensis (strain WY96-3418) GN=ubiA PE=3 SV=1
Length = 289
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 158 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 274
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 275 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 327
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|A7NA50|UBIA_FRATF 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. holarctica (strain FTNF002-00 / FTA) GN=ubiA PE=3
SV=1
Length = 289
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 158 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 274
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 275 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 327
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|Q5NGI4|UBIA_FRATT 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. tularensis (strain SCHU S4 / Schu 4) GN=ubiA PE=3
SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 158 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 274
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFST- 156
Query: 275 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 327
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|Q14HY6|UBIA_FRAT1 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. tularensis (strain FSC 198) GN=ubiA PE=3 SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 158 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 274
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFST- 156
Query: 275 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 327
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|A1TJR2|UBIA_ACIAC 4-hydroxybenzoate octaprenyltransferase OS=Acidovorax citrulli
(strain AAC00-1) GN=ubiA PE=3 SV=1
Length = 295
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 21/186 (11%)
Query: 158 LSAVLMNNYVGTVNQVADVEIDKVNK--PDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
L +LM + VN VAD + D+ K P+ SG +S+ L + L+L S + L+
Sbjct: 59 LGTILMRSAGCCVNDVADRDFDRHVKRTAQRPVTSGAVSVREALGVGAVLALVSFGLVLT 118
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYV 275
+ I W L A ++ PF K F++ V G+ + + F
Sbjct: 119 TNA-----ATIAWSLPALAVTIAYPF----AKRFVS--MPQAVLGVAFSMGIPMAFTA-- 165
Query: 276 LGRPVVITRPLIFAAAIISTISAVMSLLKD--IPDEDGDKQFGFQSISSKLGKENVLRLC 333
+G V P++ A ++ + V++ + + D D D + G ++ + LG+ +V +
Sbjct: 166 VGGAV----PMLAAWLVLGNLCWVLAYDTEYAMVDRDDDLKIGMKTSAITLGRHDVPAVM 221
Query: 334 VYALFF 339
+ L F
Sbjct: 222 AFYLAF 227
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 166 YVGTVNQVADVEIDKVNKPDLPLASGDLSM 195
Y +N + D+EID++NKP PL SG + +
Sbjct: 57 YGNVINDIFDIEIDRINKPSRPLPSGKIKL 86
>sp|Q0BNI0|UBIA_FRATO 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. holarctica (strain OSU18) GN=ubiA PE=3 SV=1
Length = 284
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 158 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 215
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 216 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 274
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 275 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 327
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLETGIKSSAVLFGNK 206
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 228
+N D++ID +N+P+ P+ SG + + L IA S+ S I G I
Sbjct: 69 AINDYFDIKIDSINRPERPIPSGRVKAKEAFYFSYLLFALGTLIAFSINS---ICGSIAL 125
Query: 229 F--LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPL 286
F LL Y+ L K P L + + + G V+ F I + G ++
Sbjct: 126 FNSLLLILYAKTL-----KGTPLLGNLSIGYLTGSVFLFGASI----FGFGGIKALSVLF 176
Query: 287 IFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCV 334
+ AA I+ ++KDI D +GD G ++ ++G + L V
Sbjct: 177 LLAALAITA----REIVKDIEDMEGDSLEGADTLPLRIGAKKAGYLAV 220
>sp|Q8TS44|DGGGP_METAC Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0961 PE=3 SV=1
Length = 289
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 123 AMIGTIVGITSIAILPLQSFADLT-PKYFMEFLKALLSAVLMNNYVGTVNQVADVEIDKV 181
A+IGT++ + PL S + T P F++ L L++ +N D++ID +
Sbjct: 24 AVIGTLIAFNILTSGPLSS--NFTGPFPFLDAGFVFLVVFLVSGAGNAINDYFDIKIDSI 81
Query: 182 NKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWF--LLGTAYSVDL 239
N+P+ P+ SG + L + L +A S+ S I GLI F LL Y+ L
Sbjct: 82 NRPERPIPSGRVQAKEALYFSYLLFAAGTLLAFSINS---ICGLIALFNSLLLILYAKTL 138
Query: 240 PFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAV 299
K P L + + + G V+ F V G + T + I+A
Sbjct: 139 -----KGTPLLGNLSIGYLTGSVFLFG------ASVFGLEGLKTL-FVLFLLAALAITA- 185
Query: 300 MSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCV 334
++KDI D +GD+ ++ ++G + L V
Sbjct: 186 REIVKDIEDMEGDRLEDADTLPLRIGAKKAGYLAV 220
>sp|A2BIU7|DGGGP_HYPBU Digeranylgeranylglyceryl phosphate synthase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0025 PE=3
SV=1
Length = 302
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 22/165 (13%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 228
+N D+E D V KP P+ SG +S G L L IAL ++FG V
Sbjct: 64 VINDYYDIETDMVAKPWRPIVSGRVSPGAARFYAYMLFTIGLIIALVTCPNFIVFGFAVL 123
Query: 229 -FLLGTAYSVDLPFLRWKTKPFLAGMCMVT-------VFGLVYQFSFFIHFQKYVLGRPV 280
LL YS RW + L G ++ VFG +Y S I K VL P
Sbjct: 124 NALLVHEYS------RWIKRTGLPGNIVIAFNSASTIVFGALYA-SCMIK-GKVVL--PS 173
Query: 281 VITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLG 325
V P+++A ++ +K I D GD G +++ + G
Sbjct: 174 VALIPVLYAFLLVLG----REFVKGIEDVKGDAIAGIGTLAVRFG 214
>sp|A4G0P3|DGGGP_METM5 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1730
PE=3 SV=1
Length = 278
Score = 35.8 bits (81), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 143 ADLTPKYF-MEFLKALLSA----VLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGT 197
L YF +E + L+ A L+ + +N + D++ID++NKP+ P+ S +S+
Sbjct: 25 GGLIASYFNLEMVNNLIFASIVVFLVCGFGNALNDIYDLKIDRINKPERPIPSKRISLTN 84
Query: 198 GLAITLTLSLTSLAIAL 214
+ L T L I+L
Sbjct: 85 ARIFSYLLVFTGLCISL 101
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 35.4 bits (80), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 19/154 (12%)
Query: 169 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 228
+N D EID +N+PD P+ SG + G L + L L IA+ PL
Sbjct: 53 VINDYYDKEIDAINQPDRPIPSGQIIPGHALMYAILLFLIGNGIAILFTPLPL------- 105
Query: 229 FLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIF 288
++ + W FL ++ + Y + F + G T+ +I
Sbjct: 106 ----AGIAMGNSVILWLYASFLKKTPLIGNISVSYLAASIFLFGGAIQG-----TQGIIS 156
Query: 289 AAAIISTISAVM---SLLKDIPDEDGDKQFGFQS 319
I VM L+KD D GD + G ++
Sbjct: 157 VFPIAGATWGVMLARELIKDAEDMPGDNEHGART 190
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 35.4 bits (80), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 162 LMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIAL 214
L+ + +N + D++IDK+NKP P+ S +S+G + L + L I++
Sbjct: 49 LVCGFGNALNDIYDLKIDKINKPKRPIPSKRISLGEARIFSYLLVVMGLIISM 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,765,162
Number of Sequences: 539616
Number of extensions: 5618815
Number of successful extensions: 18235
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 18136
Number of HSP's gapped (non-prelim): 126
length of query: 435
length of database: 191,569,459
effective HSP length: 120
effective length of query: 315
effective length of database: 126,815,539
effective search space: 39946894785
effective search space used: 39946894785
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)