Query 013850
Match_columns 435
No_of_seqs 158 out of 1374
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 08:01:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013850.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013850hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1177 Long chain fatty acid 100.0 3.3E-62 7.2E-67 436.2 29.8 392 27-434 50-470 (596)
2 KOG1176 Acyl-CoA synthetase [L 100.0 1E-60 2.2E-65 456.4 36.9 385 34-433 23-416 (537)
3 PTZ00342 acyl-CoA synthetase; 100.0 1.7E-59 3.6E-64 473.2 39.0 414 9-434 43-579 (746)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 3.9E-59 8.4E-64 460.5 39.4 392 27-433 11-409 (534)
5 PLN02614 long-chain acyl-CoA s 100.0 6.6E-59 1.4E-63 469.7 38.0 418 6-434 22-505 (666)
6 COG1022 FAA1 Long-chain acyl-C 100.0 3.6E-58 7.8E-63 442.2 33.6 380 27-434 16-458 (613)
7 PLN02574 4-coumarate--CoA liga 100.0 4.7E-57 1E-61 450.6 42.0 412 9-433 22-438 (560)
8 COG0365 Acs Acyl-coenzyme A sy 100.0 1.4E-57 2.9E-62 432.5 34.7 367 27-418 8-393 (528)
9 PLN02861 long-chain-fatty-acid 100.0 2.7E-57 5.8E-62 458.4 36.6 396 27-434 43-502 (660)
10 KOG1256 Long-chain acyl-CoA sy 100.0 5.4E-57 1.2E-61 427.7 34.8 401 24-434 72-536 (691)
11 PLN02736 long-chain acyl-CoA s 100.0 1.4E-56 3.1E-61 453.8 38.1 395 27-434 44-496 (651)
12 PLN02246 4-coumarate--CoA liga 100.0 1.2E-55 2.5E-60 439.0 42.1 408 9-434 7-421 (537)
13 PRK06334 long chain fatty acid 100.0 4.3E-56 9.2E-61 440.9 38.3 386 27-434 19-419 (539)
14 PLN02330 4-coumarate--CoA liga 100.0 9.8E-55 2.1E-59 433.0 41.7 411 7-434 10-426 (546)
15 PLN02387 long-chain-fatty-acid 100.0 2.1E-55 4.6E-60 446.3 37.3 399 27-434 58-544 (696)
16 PF00501 AMP-binding: AMP-bind 100.0 1.7E-56 3.6E-61 431.7 27.4 381 33-434 1-397 (417)
17 PLN02654 acetate-CoA ligase 100.0 5.5E-55 1.2E-59 442.0 38.0 400 27-434 87-522 (666)
18 PLN02860 o-succinylbenzoate-Co 100.0 6.6E-55 1.4E-59 435.4 37.3 393 22-434 2-423 (563)
19 PRK07788 acyl-CoA synthetase; 100.0 1.2E-54 2.6E-59 432.9 38.3 382 27-433 49-435 (549)
20 PRK08180 feruloyl-CoA synthase 100.0 1.2E-54 2.5E-59 437.3 37.9 386 27-434 39-449 (614)
21 PRK07529 AMP-binding domain pr 100.0 3.1E-54 6.7E-59 435.0 39.2 410 9-434 11-454 (632)
22 PRK08314 long-chain-fatty-acid 100.0 9.4E-54 2E-58 426.6 39.6 397 26-434 9-425 (546)
23 PTZ00216 acyl-CoA synthetase; 100.0 2.7E-54 5.9E-59 439.3 36.0 393 27-434 69-545 (700)
24 PLN02430 long-chain-fatty-acid 100.0 5.8E-54 1.3E-58 433.3 37.9 416 8-434 21-502 (660)
25 PRK13295 cyclohexanecarboxylat 100.0 2.2E-53 4.7E-58 423.5 40.3 385 27-434 24-428 (547)
26 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.6E-53 3.5E-58 430.6 38.4 397 27-434 56-484 (625)
27 PTZ00237 acetyl-CoA synthetase 100.0 9.4E-54 2E-58 431.6 36.1 399 27-434 58-501 (647)
28 PRK12582 acyl-CoA synthetase; 100.0 1.4E-53 3.1E-58 430.2 36.5 384 27-434 49-461 (624)
29 TIGR02316 propion_prpE propion 100.0 3.1E-53 6.7E-58 428.0 38.6 398 27-434 51-481 (628)
30 PRK08316 acyl-CoA synthetase; 100.0 4.5E-53 9.7E-58 419.9 38.2 393 24-434 8-404 (523)
31 PRK04319 acetyl-CoA synthetase 100.0 4E-53 8.6E-58 423.4 37.3 388 27-434 42-441 (570)
32 PRK07656 long-chain-fatty-acid 100.0 6.4E-53 1.4E-57 417.8 38.3 390 27-434 5-401 (513)
33 PRK09274 peptide synthase; Pro 100.0 3.9E-53 8.4E-58 422.5 36.9 385 27-434 6-429 (552)
34 PRK00174 acetyl-CoA synthetase 100.0 1.1E-52 2.3E-57 425.4 40.2 397 27-434 66-492 (637)
35 PRK05605 long-chain-fatty-acid 100.0 1.2E-52 2.5E-57 420.7 39.6 398 27-434 32-454 (573)
36 COG1021 EntE Peptide arylation 100.0 2.3E-54 4.9E-59 377.7 23.4 384 27-434 28-423 (542)
37 PRK05677 long-chain-fatty-acid 100.0 2.5E-52 5.5E-57 417.0 41.0 395 27-433 24-441 (562)
38 PRK08315 AMP-binding domain pr 100.0 2E-52 4.4E-57 418.2 39.1 397 22-433 11-435 (559)
39 PRK07638 acyl-CoA synthetase; 100.0 2.1E-52 4.5E-57 411.0 37.8 369 27-433 1-369 (487)
40 PRK06060 acyl-CoA synthetase; 100.0 9E-53 1.9E-57 430.1 36.5 367 27-434 4-374 (705)
41 PRK06839 acyl-CoA synthetase; 100.0 1.9E-52 4.2E-57 412.6 36.5 374 28-434 3-380 (496)
42 PRK07786 long-chain-fatty-acid 100.0 4.5E-52 9.7E-57 413.5 38.4 385 27-434 17-408 (542)
43 PRK03640 O-succinylbenzoic aci 100.0 4.4E-52 9.6E-57 408.5 37.8 368 27-434 2-369 (483)
44 PRK06087 short chain acyl-CoA 100.0 7.7E-52 1.7E-56 412.7 39.8 387 27-434 23-419 (547)
45 PRK13382 acyl-CoA synthetase; 100.0 6.1E-52 1.3E-56 411.8 38.6 377 27-434 43-425 (537)
46 PRK06145 acyl-CoA synthetase; 100.0 9E-52 1.9E-56 407.7 38.4 381 27-434 2-382 (497)
47 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.4E-51 3E-56 408.8 39.3 383 27-434 23-417 (527)
48 PRK07514 malonyl-CoA synthase; 100.0 1.5E-51 3.2E-56 407.0 38.9 382 26-434 2-386 (504)
49 PRK07769 long-chain-fatty-acid 100.0 2.4E-52 5.2E-57 422.3 33.9 383 25-434 19-473 (631)
50 PRK08633 2-acyl-glycerophospho 100.0 8.3E-52 1.8E-56 446.4 39.0 395 27-434 615-1028(1146)
51 PRK05857 acyl-CoA synthetase; 100.0 7.7E-52 1.7E-56 411.3 35.0 385 27-434 14-411 (540)
52 PRK12492 long-chain-fatty-acid 100.0 4.5E-51 9.8E-56 407.9 40.4 397 27-434 24-450 (562)
53 PRK06187 long-chain-fatty-acid 100.0 2.5E-51 5.4E-56 407.2 38.2 389 26-434 5-404 (521)
54 PRK12583 acyl-CoA synthetase; 100.0 4E-51 8.6E-56 408.9 39.8 392 27-434 18-437 (558)
55 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 4.2E-51 9.2E-56 406.4 39.7 385 27-434 22-426 (538)
56 PRK10524 prpE propionyl-CoA sy 100.0 2.3E-51 5.1E-56 415.2 38.4 398 27-434 52-482 (629)
57 PRK05852 acyl-CoA synthetase; 100.0 2.8E-51 6E-56 407.3 37.9 389 27-434 16-417 (534)
58 PRK12467 peptide synthase; Pro 100.0 5.1E-52 1.1E-56 482.0 37.9 377 27-434 3095-3480(3956)
59 PRK12476 putative fatty-acid-- 100.0 1.3E-51 2.9E-56 415.2 32.6 381 27-434 34-485 (612)
60 PRK06155 crotonobetaine/carnit 100.0 1.9E-50 4E-55 401.4 40.2 381 27-434 21-409 (542)
61 PRK09088 acyl-CoA synthetase; 100.0 8.5E-51 1.8E-55 399.8 37.4 366 34-434 2-370 (488)
62 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.9E-50 4.2E-55 400.2 39.3 390 28-434 1-403 (515)
63 KOG1180 Acyl-CoA synthetase [L 100.0 9E-52 1.9E-56 375.5 26.7 418 7-434 18-524 (678)
64 PRK06178 acyl-CoA synthetase; 100.0 3.2E-50 7E-55 402.6 40.6 417 7-434 13-451 (567)
65 PRK10252 entF enterobactin syn 100.0 6.1E-51 1.3E-55 443.9 38.2 376 27-434 458-846 (1296)
66 PRK03584 acetoacetyl-CoA synth 100.0 2E-50 4.3E-55 409.8 39.2 394 27-434 86-507 (655)
67 PRK07059 Long-chain-fatty-acid 100.0 3.6E-50 7.7E-55 401.4 40.1 400 24-434 20-444 (557)
68 PRK08008 caiC putative crotono 100.0 3.7E-50 7.9E-55 398.1 39.4 388 27-433 7-406 (517)
69 PLN03052 acetate--CoA ligase; 100.0 3.6E-50 7.7E-55 408.0 39.7 397 27-434 174-598 (728)
70 PRK07470 acyl-CoA synthetase; 100.0 2E-50 4.4E-55 400.9 37.2 384 27-434 7-403 (528)
71 PRK08043 bifunctional acyl-[ac 100.0 1.3E-50 2.9E-55 414.4 35.7 383 26-434 203-600 (718)
72 PRK06188 acyl-CoA synthetase; 100.0 4E-50 8.7E-55 398.4 38.0 381 27-433 12-401 (524)
73 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.8E-50 4E-55 399.0 35.4 377 28-434 1-383 (502)
74 PLN03102 acyl-activating enzym 100.0 3.8E-50 8.3E-55 401.8 38.0 390 25-434 12-429 (579)
75 PRK06164 acyl-CoA synthetase; 100.0 5.9E-50 1.3E-54 398.6 39.2 391 26-434 9-415 (540)
76 TIGR03443 alpha_am_amid L-amin 100.0 8.4E-51 1.8E-55 444.4 35.9 392 27-434 236-687 (1389)
77 PRK12316 peptide synthase; Pro 100.0 9.8E-51 2.1E-55 478.2 38.9 378 27-434 511-895 (5163)
78 PRK06710 long-chain-fatty-acid 100.0 4.7E-50 1E-54 401.0 38.2 395 27-433 24-439 (563)
79 TIGR02262 benz_CoA_lig benzoat 100.0 8.3E-50 1.8E-54 394.6 38.6 378 30-433 7-392 (508)
80 PRK10946 entE enterobactin syn 100.0 6.8E-50 1.5E-54 397.2 37.9 379 27-433 25-417 (536)
81 PRK12467 peptide synthase; Pro 100.0 1.8E-50 3.9E-55 469.2 38.7 379 27-434 1574-1963(3956)
82 TIGR03205 pimA dicarboxylate-- 100.0 2.3E-49 5E-54 394.2 40.5 395 27-434 21-430 (541)
83 PRK13388 acyl-CoA synthetase; 100.0 1.4E-49 3E-54 395.0 38.4 370 27-434 3-389 (540)
84 PRK13383 acyl-CoA synthetase; 100.0 1.2E-49 2.6E-54 394.0 37.2 366 27-433 35-404 (516)
85 PRK05620 long-chain-fatty-acid 100.0 1.7E-49 3.8E-54 397.7 38.8 400 27-434 10-439 (576)
86 PRK12316 peptide synthase; Pro 100.0 3.2E-50 6.9E-55 473.9 39.0 379 27-434 2003-2390(5163)
87 PRK05851 long-chain-fatty-acid 100.0 2.6E-50 5.7E-55 399.0 31.7 370 29-434 4-405 (525)
88 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2.2E-49 4.8E-54 400.5 38.6 394 27-434 87-508 (652)
89 PRK07867 acyl-CoA synthetase; 100.0 4.5E-49 9.7E-54 390.1 39.6 371 27-433 5-389 (529)
90 PRK07008 long-chain-fatty-acid 100.0 4.1E-49 8.8E-54 391.9 38.0 389 27-433 10-417 (539)
91 PRK05691 peptide synthase; Val 100.0 1E-49 2.2E-54 466.7 38.2 383 27-434 3720-4111(4334)
92 PRK08751 putative long-chain f 100.0 8.3E-49 1.8E-53 392.0 39.5 396 27-433 25-445 (560)
93 PRK08279 long-chain-acyl-CoA s 100.0 5.4E-49 1.2E-53 396.0 37.7 388 24-434 34-448 (600)
94 PRK06018 putative acyl-CoA syn 100.0 9.4E-49 2E-53 389.7 38.7 394 21-433 4-418 (542)
95 PRK04813 D-alanine--poly(phosp 100.0 4.8E-49 1E-53 389.1 36.4 377 27-434 2-385 (503)
96 PLN02479 acetate-CoA ligase 100.0 1.6E-48 3.4E-53 389.8 39.5 393 27-433 20-438 (567)
97 PRK08974 long-chain-fatty-acid 100.0 4.3E-48 9.3E-53 386.7 41.6 396 27-434 23-441 (560)
98 PRK05691 peptide synthase; Val 100.0 4.8E-49 1.1E-53 461.0 38.4 377 27-434 1131-1514(4334)
99 PRK13390 acyl-CoA synthetase; 100.0 1.4E-48 3E-53 385.2 35.2 377 35-434 5-388 (501)
100 PRK07787 acyl-CoA synthetase; 100.0 3.4E-48 7.3E-53 379.3 34.9 348 37-434 10-359 (471)
101 PRK05850 acyl-CoA synthetase; 100.0 2.4E-48 5.2E-53 390.0 33.4 382 27-434 1-446 (578)
102 PRK13391 acyl-CoA synthetase; 100.0 5.7E-47 1.2E-51 374.6 37.2 375 34-433 4-390 (511)
103 PRK07798 acyl-CoA synthetase; 100.0 8.9E-47 1.9E-51 375.6 38.3 389 27-434 3-417 (533)
104 TIGR01733 AA-adenyl-dom amino 100.0 3.8E-47 8.2E-52 365.6 33.8 352 56-434 1-364 (408)
105 PRK08162 acyl-CoA synthetase; 100.0 2E-46 4.4E-51 373.6 39.3 389 27-433 18-424 (545)
106 PRK09192 acyl-CoA synthetase; 100.0 3E-47 6.6E-52 381.5 32.9 387 19-434 15-448 (579)
107 PRK06814 acylglycerophosphoeth 100.0 1.2E-46 2.6E-51 405.0 39.1 381 27-434 631-1019(1140)
108 PRK07768 long-chain-fatty-acid 100.0 1.8E-46 4E-51 373.9 35.0 377 28-434 3-423 (545)
109 PRK12406 long-chain-fatty-acid 100.0 4E-46 8.7E-51 368.4 36.9 372 44-434 3-388 (509)
110 PRK08276 long-chain-fatty-acid 100.0 4.7E-46 1E-50 367.4 35.6 365 45-434 2-378 (502)
111 KOG1179 Very long-chain acyl-C 100.0 4.3E-46 9.2E-51 340.0 31.9 393 23-432 73-495 (649)
112 PRK07868 acyl-CoA synthetase; 100.0 9E-46 1.9E-50 387.7 37.7 387 24-434 444-845 (994)
113 PRK09029 O-succinylbenzoic aci 100.0 6.4E-45 1.4E-49 355.0 33.5 338 28-434 3-341 (458)
114 PRK07445 O-succinylbenzoic aci 100.0 2.7E-45 5.9E-50 355.2 29.6 314 54-434 19-333 (452)
115 TIGR01923 menE O-succinylbenzo 100.0 5.9E-44 1.3E-48 346.4 33.4 329 56-434 1-329 (436)
116 KOG1175 Acyl-CoA synthetase [L 100.0 1.4E-43 3.1E-48 337.4 29.6 409 17-434 55-484 (626)
117 PLN03051 acyl-activating enzym 100.0 1.7E-43 3.7E-48 348.0 30.9 338 86-434 1-366 (499)
118 PRK08308 acyl-CoA synthetase; 100.0 4.6E-41 1E-45 323.3 33.3 288 46-399 2-289 (414)
119 PTZ00297 pantothenate kinase; 100.0 1.8E-40 3.8E-45 348.2 36.6 376 27-435 427-860 (1452)
120 COG1020 EntF Non-ribosomal pep 100.0 5E-36 1.1E-40 304.5 34.4 373 27-434 227-605 (642)
121 TIGR03089 conserved hypothetic 100.0 2.4E-28 5.2E-33 212.8 20.9 220 33-285 2-227 (227)
122 PRK07824 O-succinylbenzoic aci 100.0 6E-28 1.3E-32 227.8 21.9 209 187-434 30-243 (358)
123 KOG3628 Predicted AMP-binding 99.9 2.6E-25 5.7E-30 216.8 24.3 390 27-433 770-1227(1363)
124 TIGR02155 PA_CoA_ligase phenyl 99.9 1.4E-25 3E-30 216.0 19.5 203 190-399 73-281 (422)
125 TIGR03335 F390_ftsA coenzyme F 99.9 6.4E-23 1.4E-27 197.7 20.3 199 189-399 83-286 (445)
126 TIGR02372 4_coum_CoA_lig 4-cou 99.9 1.7E-22 3.8E-27 190.0 18.4 171 192-377 95-265 (386)
127 COG1541 PaaK Coenzyme F390 syn 99.8 7.1E-18 1.5E-22 155.1 18.0 206 188-399 86-294 (438)
128 KOG1178 Non-ribosomal peptide 99.7 3.2E-17 6.9E-22 165.4 16.9 308 28-354 37-372 (1032)
129 KOG3628 Predicted AMP-binding 99.7 1.6E-16 3.4E-21 156.2 16.8 373 28-418 95-555 (1363)
130 TIGR02304 aden_form_hyp probab 99.4 1.3E-11 2.9E-16 116.8 16.1 146 194-350 101-251 (430)
131 PF04443 LuxE: Acyl-protein sy 98.9 1.1E-07 2.5E-12 88.1 18.9 202 189-400 86-312 (365)
132 PLN02620 indole-3-acetic acid- 96.5 0.11 2.4E-06 51.6 14.9 31 189-219 98-129 (612)
133 PLN02249 indole-3-acetic acid- 96.3 0.074 1.6E-06 53.1 13.0 30 189-218 97-127 (597)
134 COG1541 PaaK Coenzyme F390 syn 96.1 0.05 1.1E-06 51.5 10.1 87 53-140 108-196 (438)
135 PLN02247 indole-3-acetic acid- 96.0 0.29 6.4E-06 48.7 15.1 32 189-220 86-118 (606)
136 PF03321 GH3: GH3 auxin-respon 95.8 0.011 2.4E-07 58.5 4.7 32 188-219 76-108 (528)
137 TIGR02155 PA_CoA_ligase phenyl 92.4 1.3 2.7E-05 42.9 10.5 87 53-140 93-181 (422)
138 TIGR03335 F390_ftsA coenzyme F 92.0 1.7 3.7E-05 42.4 10.9 82 53-137 104-187 (445)
139 PRK07656 long-chain-fatty-acid 87.9 4.4 9.5E-05 40.1 10.4 100 40-143 164-272 (513)
140 PRK06334 long chain fatty acid 86.4 8.4 0.00018 38.6 11.4 100 39-141 180-288 (539)
141 PRK06187 long-chain-fatty-acid 85.8 11 0.00023 37.4 11.8 99 41-143 166-272 (521)
142 PRK08315 AMP-binding domain pr 84.7 9.3 0.0002 38.4 10.9 97 41-140 198-303 (559)
143 PRK12583 acyl-CoA synthetase; 82.8 15 0.00033 36.8 11.6 85 53-140 219-305 (558)
144 TIGR03089 conserved hypothetic 82.3 9.7 0.00021 33.2 8.6 54 72-127 171-226 (227)
145 PRK04319 acetyl-CoA synthetase 81.3 14 0.0003 37.3 10.5 100 40-142 203-311 (570)
146 PLN03051 acyl-activating enzym 80.5 15 0.00033 36.3 10.4 99 41-142 118-224 (499)
147 TIGR01733 AA-adenyl-dom amino 80.4 22 0.00048 33.8 11.3 101 40-143 118-228 (408)
148 TIGR01923 menE O-succinylbenzo 80.2 11 0.00024 36.3 9.2 84 53-142 129-213 (436)
149 TIGR03098 ligase_PEP_1 acyl-Co 80.0 23 0.0005 35.0 11.5 86 53-142 179-265 (515)
150 PLN02860 o-succinylbenzoate-Co 79.6 21 0.00046 35.9 11.2 98 40-141 170-275 (563)
151 PF00501 AMP-binding: AMP-bind 77.2 13 0.00029 35.5 8.7 99 40-142 153-263 (417)
152 PRK08308 acyl-CoA synthetase; 77.1 31 0.00067 33.0 11.2 100 40-143 99-207 (414)
153 PRK06188 acyl-CoA synthetase; 77.0 30 0.00064 34.4 11.3 86 53-142 186-271 (524)
154 KOG1177 Long chain fatty acid 77.0 25 0.00054 34.0 9.6 119 19-142 201-340 (596)
155 PRK08314 long-chain-fatty-acid 76.1 24 0.00053 35.2 10.5 98 40-141 188-294 (546)
156 PRK08316 acyl-CoA synthetase; 74.8 37 0.00081 33.6 11.4 85 53-141 189-275 (523)
157 PRK03640 O-succinylbenzoic aci 74.5 28 0.00062 34.0 10.4 98 40-141 139-244 (483)
158 PRK07638 acyl-CoA synthetase; 74.1 37 0.00081 33.3 11.1 87 53-143 161-248 (487)
159 PRK13295 cyclohexanecarboxylat 73.9 40 0.00086 33.8 11.4 98 40-141 195-301 (547)
160 PRK06164 acyl-CoA synthetase; 73.0 35 0.00075 34.1 10.7 100 40-143 179-286 (540)
161 PRK11761 cysM cysteine synthas 72.2 35 0.00076 31.1 9.5 89 43-134 28-117 (296)
162 PLN02565 cysteine synthase 70.6 38 0.00082 31.3 9.4 91 43-135 31-122 (322)
163 TIGR02262 benz_CoA_lig benzoat 70.1 48 0.001 32.7 10.8 99 40-140 159-266 (508)
164 PRK07529 AMP-binding domain pr 70.0 45 0.00097 34.2 10.8 100 40-142 211-324 (632)
165 PRK08043 bifunctional acyl-[ac 69.5 48 0.001 34.6 11.0 98 40-140 363-469 (718)
166 TIGR01136 cysKM cysteine synth 67.9 44 0.00095 30.5 9.2 90 43-135 23-113 (299)
167 PRK10252 entF enterobactin syn 67.5 50 0.0011 37.2 11.4 98 40-140 596-703 (1296)
168 cd01445 TST_Repeats Thiosulfat 67.3 15 0.00033 29.0 5.4 41 65-105 81-124 (138)
169 PRK08633 2-acyl-glycerophospho 67.1 52 0.0011 36.5 11.3 101 39-142 779-888 (1146)
170 PLN02246 4-coumarate--CoA liga 66.4 51 0.0011 32.9 10.2 101 40-141 177-287 (537)
171 PRK07787 acyl-CoA synthetase; 66.2 76 0.0016 31.0 11.2 97 40-141 126-231 (471)
172 PRK10946 entE enterobactin syn 66.1 66 0.0014 32.1 10.9 98 40-141 180-287 (536)
173 PLN02736 long-chain acyl-CoA s 65.9 1.3E+02 0.0029 30.9 13.3 102 210-317 77-180 (651)
174 PRK07470 acyl-CoA synthetase; 65.4 63 0.0014 32.1 10.7 102 40-142 161-270 (528)
175 PRK10696 tRNA 2-thiocytidine b 65.1 74 0.0016 28.3 9.9 79 56-134 4-95 (258)
176 TIGR02379 ECA_wecE TDP-4-keto- 65.1 32 0.00069 32.7 8.0 61 69-133 61-126 (376)
177 PRK08279 long-chain-acyl-CoA s 64.6 70 0.0015 32.5 10.9 97 41-141 198-303 (600)
178 COG0318 CaiC Acyl-CoA syntheta 64.3 85 0.0018 31.4 11.3 103 40-143 169-281 (534)
179 PLN02556 cysteine synthase/L-3 64.3 48 0.001 31.4 8.8 62 73-134 103-165 (368)
180 TIGR02275 DHB_AMP_lig 2,3-dihy 64.2 74 0.0016 31.6 10.9 99 39-141 180-288 (527)
181 PRK05620 long-chain-fatty-acid 64.1 73 0.0016 32.1 10.9 100 40-140 179-286 (576)
182 PF01041 DegT_DnrJ_EryC1: DegT 63.7 22 0.00048 33.5 6.6 65 65-133 51-120 (363)
183 PLN03052 acetate--CoA ligase; 63.4 90 0.0019 32.8 11.6 100 190-292 188-289 (728)
184 PLN03013 cysteine synthase 63.1 81 0.0018 30.5 10.1 81 53-135 149-230 (429)
185 COG0399 WecE Predicted pyridox 63.1 42 0.0009 31.7 8.1 76 65-144 60-145 (374)
186 TIGR01139 cysK cysteine syntha 62.9 69 0.0015 29.2 9.5 90 43-135 22-112 (298)
187 COG1022 FAA1 Long-chain acyl-C 62.8 56 0.0012 33.2 9.4 102 37-143 186-296 (613)
188 TIGR01734 D-ala-DACP-lig D-ala 62.7 93 0.002 30.6 11.2 98 40-140 139-246 (502)
189 PRK05852 acyl-CoA synthetase; 62.7 1.2E+02 0.0026 30.2 12.1 87 53-142 194-283 (534)
190 cd06448 L-Ser-dehyd Serine deh 62.3 75 0.0016 29.3 9.6 91 42-135 16-106 (316)
191 TIGR03590 PseG pseudaminic aci 62.0 92 0.002 28.1 10.1 67 62-134 18-88 (279)
192 PRK11706 TDP-4-oxo-6-deoxy-D-g 61.7 43 0.00093 31.7 8.2 59 71-133 63-126 (375)
193 PRK13388 acyl-CoA synthetase; 61.6 1.2E+02 0.0026 30.3 11.9 97 40-140 148-253 (540)
194 PRK05850 acyl-CoA synthetase; 61.5 1.1E+02 0.0024 30.8 11.7 105 190-298 14-124 (578)
195 PLN02614 long-chain acyl-CoA s 61.0 59 0.0013 33.7 9.7 99 40-141 221-330 (666)
196 PRK03584 acetoacetyl-CoA synth 60.3 83 0.0018 32.4 10.7 98 41-141 262-370 (655)
197 PRK06814 acylglycerophosphoeth 60.1 94 0.002 34.6 11.7 99 40-141 791-898 (1140)
198 PRK07788 acyl-CoA synthetase; 59.9 53 0.0012 32.9 9.0 86 53-142 225-311 (549)
199 PRK06839 acyl-CoA synthetase; 59.2 1.5E+02 0.0032 29.1 11.9 99 40-142 147-254 (496)
200 PLN02550 threonine dehydratase 59.0 1.2E+02 0.0027 30.6 11.0 92 42-138 124-215 (591)
201 PRK09274 peptide synthase; Pro 58.6 93 0.002 31.1 10.5 100 190-291 19-121 (552)
202 TIGR03443 alpha_am_amid L-amin 58.1 74 0.0016 36.3 10.6 99 40-141 413-521 (1389)
203 PRK02261 methylaspartate mutas 58.0 37 0.0008 26.8 5.9 87 243-332 13-111 (137)
204 TIGR02372 4_coum_CoA_lig 4-cou 57.7 1.6E+02 0.0034 28.1 11.3 83 53-141 113-199 (386)
205 PLN00011 cysteine synthase 57.6 92 0.002 28.8 9.4 90 43-135 33-124 (323)
206 KOG1179 Very long-chain acyl-C 57.1 46 0.001 33.0 7.3 79 53-135 260-340 (649)
207 KOG0025 Zn2+-binding dehydroge 56.5 39 0.00085 30.4 6.2 64 75-138 157-221 (354)
208 TIGR03208 cyc_hxne_CoA_lg cycl 56.5 1.3E+02 0.0029 29.9 11.2 98 39-140 192-298 (538)
209 PRK08008 caiC putative crotono 55.7 1.8E+02 0.004 28.7 12.0 101 190-296 20-122 (517)
210 PLN02654 acetate-CoA ligase 55.2 1.4E+02 0.0031 30.9 11.3 98 190-292 102-201 (666)
211 PRK07008 long-chain-fatty-acid 53.9 93 0.002 31.1 9.6 87 53-141 194-282 (539)
212 PRK06702 O-acetylhomoserine am 53.6 74 0.0016 30.9 8.3 25 324-348 351-375 (432)
213 PRK11493 sseA 3-mercaptopyruva 53.4 21 0.00046 32.3 4.4 53 53-105 200-257 (281)
214 TIGR02188 Ac_CoA_lig_AcsA acet 53.2 1.5E+02 0.0033 30.3 11.1 98 190-292 70-169 (625)
215 PTZ00237 acetyl-CoA synthetase 52.3 1.6E+02 0.0035 30.3 11.1 96 191-291 75-172 (647)
216 PRK00174 acetyl-CoA synthetase 52.2 1.5E+02 0.0032 30.4 10.9 97 190-291 80-178 (637)
217 TIGR01138 cysM cysteine syntha 52.0 1.3E+02 0.0029 27.3 9.4 90 42-134 23-113 (290)
218 COG0031 CysK Cysteine synthase 51.6 1.4E+02 0.0031 27.2 9.1 61 73-134 55-116 (300)
219 cd01519 RHOD_HSP67B2 Member of 51.3 36 0.00078 25.1 4.8 53 53-105 36-92 (106)
220 PRK15407 lipopolysaccharide bi 51.2 74 0.0016 30.9 8.0 55 75-133 107-166 (438)
221 PLN02861 long-chain-fatty-acid 51.1 1E+02 0.0022 31.8 9.6 99 40-141 218-327 (660)
222 cd01449 TST_Repeat_2 Thiosulfa 50.8 31 0.00067 26.1 4.4 41 65-105 64-104 (118)
223 PRK06087 short chain acyl-CoA 50.4 1.6E+02 0.0035 29.4 10.7 93 40-136 185-286 (547)
224 PRK05851 long-chain-fatty-acid 49.9 1.8E+02 0.0039 28.9 10.9 91 40-133 150-252 (525)
225 PRK06060 acyl-CoA synthetase; 49.9 1.4E+02 0.003 31.2 10.3 99 41-141 144-251 (705)
226 COG1064 AdhP Zn-dependent alco 49.9 83 0.0018 29.3 7.5 68 70-141 158-227 (339)
227 PRK02261 methylaspartate mutas 49.8 1.2E+02 0.0026 24.0 7.6 44 91-134 19-62 (137)
228 PRK11658 UDP-4-amino-4-deoxy-L 49.4 81 0.0018 29.9 7.9 63 65-131 59-126 (379)
229 PRK06155 crotonobetaine/carnit 49.0 1.5E+02 0.0033 29.6 10.2 99 40-142 178-284 (542)
230 KOG1176 Acyl-CoA synthetase [L 48.6 97 0.0021 31.0 8.4 91 209-301 43-137 (537)
231 PRK09188 serine/threonine prot 48.6 6.4 0.00014 37.1 0.3 12 423-434 207-218 (365)
232 cd01561 CBS_like CBS_like: Thi 48.4 1.5E+02 0.0032 26.9 9.2 92 42-136 17-109 (291)
233 TIGR02316 propion_prpE propion 48.4 1.8E+02 0.0039 29.8 10.8 97 190-291 65-163 (628)
234 PRK06381 threonine synthase; V 48.4 1.6E+02 0.0035 27.1 9.5 88 43-136 32-119 (319)
235 cd00640 Trp-synth-beta_II Tryp 48.0 1.9E+02 0.0041 25.3 9.7 93 41-136 14-106 (244)
236 TIGR01217 ac_ac_CoA_syn acetoa 48.0 2E+02 0.0043 29.7 11.0 94 192-291 99-194 (652)
237 cd04910 ACT_AK-Ectoine_1 ACT d 47.8 61 0.0013 22.3 4.8 51 273-338 19-69 (71)
238 PRK05857 acyl-CoA synthetase; 47.5 1.6E+02 0.0035 29.4 10.1 95 190-293 27-123 (540)
239 TIGR03588 PseC UDP-4-keto-6-de 47.3 1.1E+02 0.0024 28.9 8.6 66 65-133 55-128 (380)
240 PRK06145 acyl-CoA synthetase; 47.2 2.2E+02 0.0048 27.9 11.0 99 39-141 146-253 (497)
241 PRK07476 eutB threonine dehydr 46.6 1.2E+02 0.0026 28.0 8.3 53 84-136 71-123 (322)
242 PLN02387 long-chain-fatty-acid 46.3 2.3E+02 0.0051 29.5 11.3 103 210-318 105-209 (696)
243 COG2236 Predicted phosphoribos 46.0 36 0.00078 28.7 4.3 49 53-104 5-53 (192)
244 PRK09224 threonine dehydratase 45.7 1.1E+02 0.0024 30.4 8.4 91 42-137 35-125 (504)
245 PRK14807 histidinol-phosphate 45.6 2.6E+02 0.0056 26.1 10.9 55 76-133 97-155 (351)
246 KOG0023 Alcohol dehydrogenase, 45.3 1E+02 0.0022 28.4 7.1 67 69-138 172-238 (360)
247 TIGR01137 cysta_beta cystathio 45.1 1.5E+02 0.0033 28.9 9.2 89 43-134 27-116 (454)
248 PRK07867 acyl-CoA synthetase; 45.1 2.4E+02 0.0051 28.1 10.9 97 40-140 150-255 (529)
249 KOG0633 Histidinol phosphate a 44.9 40 0.00087 29.7 4.4 68 69-136 100-170 (375)
250 PLN02574 4-coumarate--CoA liga 44.8 2.5E+02 0.0054 28.2 11.1 99 190-297 52-153 (560)
251 COG0365 Acs Acyl-coenzyme A sy 44.6 2.4E+02 0.0052 28.2 10.4 82 210-293 39-122 (528)
252 PF03808 Glyco_tran_WecB: Glyc 44.4 44 0.00095 27.6 4.6 76 259-340 3-79 (172)
253 PLN03102 acyl-activating enzym 44.3 2.7E+02 0.0059 28.1 11.3 95 190-295 27-123 (579)
254 PRK07786 long-chain-fatty-acid 44.2 2.3E+02 0.005 28.2 10.7 87 53-142 192-281 (542)
255 PRK07768 long-chain-fatty-acid 44.2 1.8E+02 0.004 28.9 10.0 94 40-136 150-256 (545)
256 PRK13237 tyrosine phenol-lyase 43.4 1.7E+02 0.0037 28.6 8.9 69 53-126 76-174 (460)
257 PTZ00342 acyl-CoA synthetase; 43.3 2.6E+02 0.0057 29.5 11.1 118 190-317 74-207 (746)
258 PRK04813 D-alanine--poly(phosp 42.8 3.3E+02 0.0072 26.6 11.5 85 53-140 161-248 (503)
259 PRK12406 long-chain-fatty-acid 42.7 2.8E+02 0.006 27.3 10.9 68 73-141 190-258 (509)
260 PF00455 DeoRC: DeoR C termina 42.6 1.8E+02 0.0038 23.7 7.9 91 254-352 13-111 (161)
261 PLN02723 3-mercaptopyruvate su 42.5 42 0.0009 31.1 4.6 52 54-105 238-295 (320)
262 TIGR01127 ilvA_1Cterm threonin 42.4 1.6E+02 0.0034 28.0 8.7 90 42-136 15-104 (380)
263 KOG1138 Predicted cleavage and 42.4 36 0.00078 32.9 4.1 73 67-139 406-479 (653)
264 PF09269 DUF1967: Domain of un 42.2 22 0.00048 24.2 2.1 20 65-84 43-62 (69)
265 cd02069 methionine_synthase_B1 42.1 2E+02 0.0042 24.8 8.4 81 244-328 99-186 (213)
266 PRK10524 prpE propionyl-CoA sy 42.0 2.9E+02 0.0063 28.2 11.2 97 190-291 66-164 (629)
267 PLN02356 phosphateglycerate ki 41.8 1.6E+02 0.0035 28.4 8.4 89 43-134 69-158 (423)
268 PLN02330 4-coumarate--CoA liga 41.3 2.1E+02 0.0046 28.5 9.9 97 190-295 41-139 (546)
269 PF00818 Ice_nucleation: Ice n 40.8 14 0.0003 16.9 0.6 10 341-350 1-10 (16)
270 PLN02430 long-chain-fatty-acid 40.6 2.2E+02 0.0047 29.5 10.0 99 40-141 218-327 (660)
271 TIGR03595 Obg_CgtA_exten Obg f 39.9 37 0.0008 23.1 2.9 19 67-85 45-63 (69)
272 PRK12483 threonine dehydratase 39.9 2E+02 0.0044 28.7 9.0 91 43-138 53-143 (521)
273 PRK07798 acyl-CoA synthetase; 39.9 3.8E+02 0.0082 26.4 11.5 86 210-297 27-114 (533)
274 PRK08751 putative long-chain f 39.8 2.1E+02 0.0045 28.7 9.6 102 40-141 206-318 (560)
275 cd02070 corrinoid_protein_B12- 39.4 2.4E+02 0.0052 23.9 10.1 82 53-134 49-141 (201)
276 COG2885 OmpA Outer membrane pr 39.3 85 0.0019 26.3 5.7 59 27-86 99-161 (190)
277 PRK07514 malonyl-CoA synthase; 39.2 3.5E+02 0.0076 26.5 11.0 87 209-297 26-114 (504)
278 PRK07769 long-chain-fatty-acid 39.1 4.4E+02 0.0095 26.9 12.5 103 190-296 34-142 (631)
279 cd02067 B12-binding B12 bindin 39.0 1.6E+02 0.0034 22.3 6.7 41 94-134 18-58 (119)
280 PRK12492 long-chain-fatty-acid 39.0 1.8E+02 0.0039 29.2 9.0 100 42-141 207-322 (562)
281 cd01448 TST_Repeat_1 Thiosulfa 38.7 1E+02 0.0023 23.3 5.8 40 66-105 66-106 (122)
282 TIGR01124 ilvA_2Cterm threonin 38.7 1.8E+02 0.0038 29.0 8.5 90 42-136 32-121 (499)
283 PRK05939 hypothetical protein; 38.5 1.5E+02 0.0033 28.3 7.9 56 76-133 83-138 (397)
284 PRK13391 acyl-CoA synthetase; 38.4 4E+02 0.0086 26.2 11.3 98 190-296 10-109 (511)
285 PRK07591 threonine synthase; V 38.2 3.8E+02 0.0082 25.9 10.9 88 43-136 106-193 (421)
286 PRK09162 hypoxanthine-guanine 37.6 97 0.0021 25.8 5.7 47 52-99 14-60 (181)
287 PRK05677 long-chain-fatty-acid 37.6 3.2E+02 0.007 27.4 10.6 95 190-295 37-134 (562)
288 PRK06382 threonine dehydratase 37.6 1.8E+02 0.0039 28.0 8.2 91 42-137 40-130 (406)
289 PRK12476 putative fatty-acid-- 37.4 4.6E+02 0.01 26.7 12.5 104 190-297 47-156 (612)
290 PRK10717 cysteine synthase A; 37.3 2.3E+02 0.0051 26.2 8.8 91 42-135 28-119 (330)
291 KOG1250 Threonine/serine dehyd 37.3 1.2E+02 0.0027 28.7 6.5 55 84-138 118-172 (457)
292 PRK08180 feruloyl-CoA synthase 37.0 2.9E+02 0.0064 28.1 10.3 99 40-141 207-319 (614)
293 TIGR02370 pyl_corrinoid methyl 36.9 2E+02 0.0044 24.3 7.6 82 244-327 95-183 (197)
294 cd02071 MM_CoA_mut_B12_BD meth 36.9 1.9E+02 0.004 22.2 6.8 41 94-134 18-58 (122)
295 PF06543 Lac_bphage_repr: Lact 36.8 26 0.00057 21.5 1.5 23 312-334 22-44 (49)
296 PRK10287 thiosulfate:cyanide s 36.4 1.2E+02 0.0027 22.5 5.5 49 53-108 41-89 (104)
297 TIGR00936 ahcY adenosylhomocys 36.0 2E+02 0.0043 27.7 8.1 58 75-132 28-87 (406)
298 PRK09331 Sep-tRNA:Cys-tRNA syn 35.8 2.2E+02 0.0047 27.1 8.6 56 76-134 99-166 (387)
299 PRK07059 Long-chain-fatty-acid 35.7 4E+02 0.0087 26.6 10.9 85 210-296 47-133 (557)
300 KOG1794 N-Acetylglucosamine ki 35.7 1.1E+02 0.0024 27.6 5.7 83 308-395 68-152 (336)
301 PRK06178 acyl-CoA synthetase; 35.4 3.5E+02 0.0076 27.1 10.5 98 40-140 207-313 (567)
302 PRK05605 long-chain-fatty-acid 34.7 2.6E+02 0.0057 28.1 9.4 97 190-297 45-143 (573)
303 PLN02409 serine--glyoxylate am 34.0 3.4E+02 0.0074 25.9 9.6 21 323-344 320-340 (401)
304 cd00615 Orn_deC_like Ornithine 33.5 2.1E+02 0.0046 25.9 7.8 55 76-133 96-161 (294)
305 PRK08162 acyl-CoA synthetase; 33.4 2.4E+02 0.0053 28.0 8.9 85 211-297 43-129 (545)
306 PRK06710 long-chain-fatty-acid 33.4 4.9E+02 0.011 26.0 11.1 98 42-142 206-313 (563)
307 PRK08276 long-chain-fatty-acid 33.3 3.1E+02 0.0066 26.9 9.5 86 210-297 10-97 (502)
308 PRK09088 acyl-CoA synthetase; 32.8 4.5E+02 0.0097 25.6 10.6 93 190-291 8-102 (488)
309 PRK08813 threonine dehydratase 32.8 3.3E+02 0.0071 25.6 8.8 81 52-137 58-138 (349)
310 TIGR02981 phageshock_pspE phag 32.7 1.5E+02 0.0032 21.9 5.4 49 53-108 39-87 (101)
311 PTZ00297 pantothenate kinase; 32.3 1.9E+02 0.0041 33.1 8.3 84 52-140 618-703 (1452)
312 PRK13383 acyl-CoA synthetase; 31.1 3.5E+02 0.0075 26.7 9.5 86 211-298 60-147 (516)
313 PRK13382 acyl-CoA synthetase; 30.9 4.3E+02 0.0093 26.3 10.2 86 53-142 214-300 (537)
314 PRK10411 DNA-binding transcrip 30.7 3.4E+02 0.0073 23.8 8.2 90 254-351 87-183 (240)
315 cd06447 D-Ser-dehyd D-Serine d 29.8 1.9E+02 0.0041 27.8 6.9 57 82-138 136-192 (404)
316 COG4009 Uncharacterized protei 29.8 2E+02 0.0043 20.1 6.0 67 53-130 8-77 (88)
317 PLN02479 acetate-CoA ligase 29.7 5.9E+02 0.013 25.6 11.6 94 190-294 33-128 (567)
318 TIGR02080 O_succ_thio_ly O-suc 29.4 2.5E+02 0.0053 26.8 7.7 25 324-348 308-332 (382)
319 smart00450 RHOD Rhodanese Homo 29.4 1.6E+02 0.0036 20.6 5.3 40 66-105 43-82 (100)
320 COG2805 PilT Tfp pilus assembl 29.3 2.6E+02 0.0057 25.6 7.1 97 27-124 140-245 (353)
321 COG1167 ARO8 Transcriptional r 29.2 2.6E+02 0.0057 27.4 8.0 58 76-136 176-236 (459)
322 PRK08574 cystathionine gamma-s 29.2 2.5E+02 0.0053 26.8 7.6 27 323-349 310-336 (385)
323 TIGR02618 tyr_phenol_ly tyrosi 29.1 4.2E+02 0.0091 25.9 9.0 69 53-126 69-167 (450)
324 PRK08329 threonine synthase; V 28.9 4.9E+02 0.011 24.4 10.7 87 43-135 73-159 (347)
325 TIGR02991 ectoine_eutB ectoine 28.9 3.3E+02 0.0072 25.1 8.2 52 85-136 72-123 (317)
326 PLN02238 hypoxanthine phosphor 28.8 1.5E+02 0.0033 24.9 5.5 43 53-97 10-53 (189)
327 PRK13390 acyl-CoA synthetase; 28.2 5.7E+02 0.012 25.0 11.1 94 190-292 10-105 (501)
328 PRK08246 threonine dehydratase 28.0 4.7E+02 0.01 24.0 9.0 58 78-136 67-124 (310)
329 TIGR02370 pyl_corrinoid methyl 28.0 3.7E+02 0.008 22.7 10.2 55 80-134 85-143 (197)
330 TIGR02035 D_Ser_am_lyase D-ser 28.0 2.1E+02 0.0045 27.8 6.8 59 81-139 153-211 (431)
331 cd01529 4RHOD_Repeats Member o 27.9 1.6E+02 0.0035 21.1 4.9 48 54-104 34-81 (96)
332 PRK06608 threonine dehydratase 27.9 4.7E+02 0.01 24.4 9.1 89 42-134 38-126 (338)
333 PRK08974 long-chain-fatty-acid 27.9 4.2E+02 0.0091 26.5 9.6 102 40-141 204-314 (560)
334 PRK08638 threonine dehydratase 27.7 3.5E+02 0.0076 25.2 8.2 55 83-137 78-132 (333)
335 KOG0330 ATP-dependent RNA heli 27.4 2.2E+02 0.0047 27.0 6.4 75 77-152 298-375 (476)
336 COG1171 IlvA Threonine dehydra 27.4 3.4E+02 0.0075 25.4 7.8 98 39-140 37-134 (347)
337 PRK07503 methionine gamma-lyas 27.2 3.1E+02 0.0068 26.3 8.0 54 76-132 101-156 (403)
338 cd01563 Thr-synth_1 Threonine 27.2 2.1E+02 0.0045 26.4 6.6 89 42-136 38-126 (324)
339 PRK02991 D-serine dehydratase; 26.9 6E+02 0.013 24.8 11.1 57 82-138 159-215 (441)
340 cd01524 RHOD_Pyr_redox Member 26.8 2.3E+02 0.005 19.9 5.7 48 53-109 34-81 (90)
341 cd01562 Thr-dehyd Threonine de 26.5 2.7E+02 0.0059 25.3 7.3 90 42-136 32-121 (304)
342 PRK05638 threonine synthase; V 26.3 2.1E+02 0.0046 27.9 6.7 91 42-138 80-170 (442)
343 TIGR01415 trpB_rel pyridoxal-p 26.0 6.1E+02 0.013 24.5 10.2 91 43-138 86-179 (419)
344 PRK06721 threonine synthase; R 25.7 2.5E+02 0.0054 26.4 6.9 90 42-137 43-133 (352)
345 COG1832 Predicted CoA-binding 25.6 1.5E+02 0.0033 23.3 4.4 36 82-117 22-57 (140)
346 cd06451 AGAT_like Alanine-glyo 25.5 3.4E+02 0.0074 25.1 8.0 12 209-220 195-206 (356)
347 PTZ00216 acyl-CoA synthetase; 25.4 4.8E+02 0.01 27.2 9.7 89 208-298 118-208 (700)
348 PLN02723 3-mercaptopyruvate su 25.2 1.7E+02 0.0037 27.0 5.6 48 65-112 89-138 (320)
349 PRK11493 sseA 3-mercaptopyruva 25.2 1.8E+02 0.0038 26.3 5.6 50 63-112 71-122 (281)
350 PRK09177 xanthine-guanine phos 25.1 2.6E+02 0.0055 22.7 6.0 38 53-92 8-45 (156)
351 COG2897 SseA Rhodanese-related 25.0 1.5E+02 0.0033 26.9 5.0 55 53-107 202-262 (285)
352 PRK04837 ATP-dependent RNA hel 25.0 6.1E+02 0.013 24.4 9.7 80 56-138 235-317 (423)
353 PRK06018 putative acyl-CoA syn 24.8 3.8E+02 0.0083 26.7 8.6 84 210-295 38-123 (542)
354 cd02070 corrinoid_protein_B12- 24.7 4.3E+02 0.0093 22.3 9.5 80 244-325 93-179 (201)
355 cd01520 RHOD_YbbB Member of th 24.6 3.2E+02 0.0069 21.0 6.4 38 74-111 81-119 (128)
356 cd07050 BMC_EutL_repeat2 ethan 24.6 1.1E+02 0.0023 21.5 3.0 39 68-106 3-42 (87)
357 PRK09629 bifunctional thiosulf 24.4 1.4E+02 0.003 30.5 5.2 41 65-105 209-249 (610)
358 PF08479 POTRA_2: POTRA domain 24.1 1.2E+02 0.0027 20.8 3.5 27 51-77 27-53 (76)
359 PF05221 AdoHcyase: S-adenosyl 24.0 4.1E+02 0.009 23.8 7.3 63 70-132 34-98 (268)
360 PRK08198 threonine dehydratase 23.6 4.1E+02 0.0089 25.5 8.1 91 43-138 38-128 (404)
361 KOG0257 Kynurenine aminotransf 23.5 4.5E+02 0.0097 25.2 7.8 105 27-135 43-147 (420)
362 PRK08134 O-acetylhomoserine am 23.3 3.8E+02 0.0082 26.1 7.8 57 84-140 83-142 (433)
363 TIGR01747 diampropi_NH3ly diam 23.2 2.6E+02 0.0056 26.6 6.5 59 80-138 94-152 (376)
364 cd06451 AGAT_like Alanine-glyo 23.1 5.2E+02 0.011 23.9 8.7 14 119-132 90-103 (356)
365 PF00291 PALP: Pyridoxal-phosp 23.0 3.4E+02 0.0073 24.6 7.2 90 40-135 22-111 (306)
366 PF14552 Tautomerase_2: Tautom 22.9 1.1E+02 0.0023 21.7 3.0 53 39-91 24-77 (82)
367 PF07722 Peptidase_C26: Peptid 22.8 90 0.0019 26.9 3.1 35 96-132 30-64 (217)
368 cd01019 ZnuA Zinc binding prot 22.7 3E+02 0.0065 24.9 6.7 81 56-138 155-240 (286)
369 PF12646 DUF3783: Domain of un 22.7 2.3E+02 0.0049 18.4 4.7 33 63-96 13-45 (58)
370 PRK07050 cystathionine beta-ly 22.7 4.4E+02 0.0096 25.2 8.1 27 323-349 323-349 (394)
371 cd02069 methionine_synthase_B1 22.6 5E+02 0.011 22.3 10.1 56 79-134 88-147 (213)
372 TIGR03531 selenium_SpcS O-phos 22.6 4.5E+02 0.0098 25.7 8.1 56 66-124 136-200 (444)
373 cd01533 4RHOD_Repeat_2 Member 22.6 2.9E+02 0.0062 20.3 5.6 46 53-105 47-92 (109)
374 PRK06234 methionine gamma-lyas 22.5 4.8E+02 0.011 24.9 8.4 26 324-349 324-349 (400)
375 TIGR01203 HGPRTase hypoxanthin 22.5 2.6E+02 0.0056 22.9 5.6 21 54-74 2-22 (166)
376 PRK14185 bifunctional 5,10-met 22.5 6E+02 0.013 23.2 8.3 76 58-133 11-96 (293)
377 cd00401 AdoHcyase S-adenosyl-L 22.3 4.8E+02 0.01 25.2 8.1 66 68-133 25-92 (413)
378 PF07994 NAD_binding_5: Myo-in 22.1 6.1E+02 0.013 23.2 9.8 71 56-128 127-227 (295)
379 PLN03026 histidinol-phosphate 22.1 6.7E+02 0.015 23.6 10.1 11 77-87 125-135 (380)
380 TIGR00260 thrC threonine synth 21.9 6.3E+02 0.014 23.2 9.2 88 43-136 40-128 (328)
381 PF11974 MG1: Alpha-2-macroglo 21.9 65 0.0014 23.6 1.8 35 365-399 23-60 (97)
382 PRK05205 bifunctional pyrimidi 21.7 2.8E+02 0.0061 22.9 5.8 45 53-99 5-51 (176)
383 cd01016 TroA Metal binding pro 21.6 2.8E+02 0.006 25.0 6.2 80 57-138 136-222 (276)
384 PRK12723 flagellar biosynthesi 21.5 4.1E+02 0.0089 25.4 7.4 99 56-154 146-264 (388)
385 PRK10595 SOS cell division inh 21.4 3.6E+02 0.0078 22.1 6.0 37 68-104 70-106 (164)
386 PRK14665 mnmA tRNA-specific 2- 21.4 3.1E+02 0.0067 25.9 6.5 59 76-134 2-68 (360)
387 COG4813 ThuA Trehalose utiliza 21.0 1.1E+02 0.0024 25.4 3.0 53 374-430 128-181 (261)
388 PRK07445 O-succinylbenzoic aci 20.9 6.4E+02 0.014 24.5 9.1 97 40-141 118-222 (452)
389 PF06564 YhjQ: YhjQ protein; 20.9 3.8E+02 0.0083 23.6 6.6 79 35-114 70-152 (243)
390 PRK07409 threonine synthase; V 20.8 3.3E+02 0.0071 25.6 6.7 89 42-136 46-135 (353)
391 PRK07868 acyl-CoA synthetase; 20.8 5.4E+02 0.012 28.3 9.2 69 73-142 640-710 (994)
392 PRK08248 O-acetylhomoserine am 20.7 4.6E+02 0.01 25.5 7.8 25 324-348 354-378 (431)
393 TIGR02326 transamin_PhnW 2-ami 20.7 3.8E+02 0.0081 25.0 7.2 75 57-133 33-108 (363)
394 PRK08133 O-succinylhomoserine 20.7 5.1E+02 0.011 24.7 8.1 57 84-140 80-139 (390)
395 PF00156 Pribosyltran: Phospho 20.7 3.1E+02 0.0067 20.6 5.6 25 54-78 4-28 (125)
396 PRK13479 2-aminoethylphosphona 20.5 7E+02 0.015 23.2 10.1 75 57-133 35-110 (368)
397 PRK08526 threonine dehydratase 20.4 4.6E+02 0.0099 25.2 7.6 92 42-138 35-126 (403)
398 PRK06815 hypothetical protein; 20.3 6.8E+02 0.015 23.0 8.9 91 42-137 35-125 (317)
399 PF08845 SymE_toxin: Toxin Sym 20.3 1.1E+02 0.0024 19.9 2.4 22 68-89 30-51 (57)
400 cd02065 B12-binding_like B12 b 20.2 3.8E+02 0.0083 20.1 6.0 44 93-136 17-60 (125)
401 PF02729 OTCace_N: Aspartate/o 20.1 4.5E+02 0.0097 20.9 10.3 93 60-153 17-123 (142)
402 PF00464 SHMT: Serine hydroxym 20.1 3.1E+02 0.0067 26.3 6.2 61 76-136 107-179 (399)
403 cd00616 AHBA_syn 3-amino-5-hyd 20.0 6.6E+02 0.014 23.1 8.7 59 71-133 50-113 (352)
No 1
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-62 Score=436.21 Aligned_cols=392 Identities=25% Similarity=0.330 Sum_probs=343.5
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+++++...+++.||+.|++....+.++||+||.+.++++|+.|.++|+++||||++..||+.+|+.++|||.++|.+.
T Consensus 50 ~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~ 129 (596)
T KOG1177|consen 50 ETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVL 129 (596)
T ss_pred ccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEE
Confidence 69999999999999999999988778889999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccH-----HHHhhcC------------------CCcEEeccCCccccccccc
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKDLN------------------LPAVLLGSKDKVSSSGLIS 163 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~------------------~~~~~~~~~~~~~~~~~~~ 163 (435)
+++||++...+++..|++.+++++|+.+.+. +.+.++. ...+++..++ .
T Consensus 130 v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed--------~ 201 (596)
T KOG1177|consen 130 VNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADED--------H 201 (596)
T ss_pred eccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCC--------C
Confidence 9999999999999999999999999976432 2222221 1233333321 3
Q ss_pred ccccccchhhhhhhcCCCCC----CCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEE
Q 013850 164 RSSKIVSFHDLIELSGSVTD----IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVL 239 (435)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l 239 (435)
...+...+++++.....+.. .......|++++.|.|||||||.|||+.+||.|++++......+..+... ++++
T Consensus 202 ~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~--~~i~ 279 (596)
T KOG1177|consen 202 PLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEK--HRIC 279 (596)
T ss_pred cCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcc--eEEE
Confidence 45567778888766553111 12356679999999999999999999999999999998888887777654 8999
Q ss_pred ecchHHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecC
Q 013850 240 CVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGA 318 (435)
Q Consensus 240 ~~~~l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG 318 (435)
+..|++|++|.....+.+|..|++++++ +.|++...+++|++++||.++++|+++..|++.+.....+++++|..+.||
T Consensus 280 ~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigG 359 (596)
T KOG1177|consen 280 IPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGG 359 (596)
T ss_pred ecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCC
Confidence 9999999999888999999999999997 579999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCC-CcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEe
Q 013850 319 APLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG-VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVR 397 (435)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~ 397 (435)
+++++++++.+.+...=..+...||+||++...+.....+. ..+..++|+.+++.+..|+| +.|..++.|..||||+|
T Consensus 360 a~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iR 438 (596)
T KOG1177|consen 360 APVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIR 438 (596)
T ss_pred CCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEE
Confidence 99999999999996643568889999999998888776654 55678999999999999999 79999999999999999
Q ss_pred CCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 398 GPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 398 g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
|++.|.| ||++++.|.+..+ .+.|+.|||++.
T Consensus 439 GY~tMl~--Ywg~~~kT~eti~---~drW~~TGDi~~ 470 (596)
T KOG1177|consen 439 GYSTMLG--YWGEEEKTKETIG---NDRWYDTGDIAV 470 (596)
T ss_pred echhhee--ecCCcccchhhcc---cccceecCceEE
Confidence 9999999 9999999999885 788999999874
No 2
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-60 Score=456.43 Aligned_cols=385 Identities=39% Similarity=0.602 Sum_probs=320.3
Q ss_pred HhhcccCCCc-eeeeecCC-CcceeHHHHHHHHHHHHHHHHhCC--CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEec
Q 013850 34 FRNSASYSSK-LALIDADS-DESLSFSQFKSIVIKVSHSFRHLG--ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA 109 (435)
Q Consensus 34 ~~~~~~~p~~-~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~g--~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i 109 (435)
.+.+..++++ +.++..+. |+.+||.|+.+++.++|.+|.++| +++||+|++++||+++++.+++||+.+|+++.++
T Consensus 23 ~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~ 102 (537)
T KOG1176|consen 23 GRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPL 102 (537)
T ss_pred cccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccccc
Confidence 3444444544 66665542 699999999999999999999765 8999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CCcEEeccCCcccccccccccccccc-hhhhhhhcCCCCCC
Q 013850 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVS-FHDLIELSGSVTDI 184 (435)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 184 (435)
||.+.+.++.+.++.++++++|++....+.+.... ...+++...... ........... +..+..... ...
T Consensus 103 Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~ 177 (537)
T KOG1176|consen 103 NPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGV---ISISDLVEDLDAFEDLMPEGL--PDG 177 (537)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCc---cccccccccccchhhccccCC--Ccc
Confidence 99999999999999999999999999988886654 333333322000 00011111111 444443333 222
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEE
Q 013850 185 PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCV 264 (435)
Q Consensus 185 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i 264 (435)
....+++|++.|+|||||||.||||++||++++.+.......+.+.. .|+.++.+|++|++|+...++..+..|+++
T Consensus 178 -~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~--~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~i 254 (537)
T KOG1176|consen 178 -IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTS--DDVYLCTLPLFHIYGLITLLLSLLAGGTTI 254 (537)
T ss_pred -cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCC--CceEEEechHHHHhHHHHHHHHHHhCCceE
Confidence 56677899999999999999999999999999998665555455544 399999999999999986677788888888
Q ss_pred EecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCc
Q 013850 265 VSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGM 344 (435)
Q Consensus 265 ~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~ 344 (435)
++...|++..+++.+++|++|++.++|.++..|++.+.....+++++|.+.+||+++++++.+++++++|+..+.+.||+
T Consensus 255 i~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGm 334 (537)
T KOG1176|consen 255 ICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGM 334 (537)
T ss_pred EECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeecc
Confidence 88889999999999999999999999999999999987778899999999999999999999999999998999999999
Q ss_pred ccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccC
Q 013850 345 TETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTD 424 (435)
Q Consensus 345 tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~ 424 (435)
||++++++.+...+. .+++++|.++++++.+|.+ ++|+.+++++.||||++|+++|.| ||+||+.|++.|. .+
T Consensus 335 TE~~~~~~~~~~~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkG--Y~~NpeaT~~~~~---~~ 407 (537)
T KOG1176|consen 335 TEAGGLITSNDWGPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKG--YLKNPEATKEAFD---DD 407 (537)
T ss_pred ccccCceeecCCCcc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchh--hcCChHHHHhhcc---cC
Confidence 999988887766643 6899999999988888888 899999999999999999999999 9999999998882 23
Q ss_pred cceecCCCC
Q 013850 425 SFIRGKDQQ 433 (435)
Q Consensus 425 ~~~~tgD~~ 433 (435)
|||+|||+|
T Consensus 408 GW~~TGDiG 416 (537)
T KOG1176|consen 408 GWFHTGDLG 416 (537)
T ss_pred CccccCceE
Confidence 677777764
No 3
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-59 Score=473.19 Aligned_cols=414 Identities=18% Similarity=0.274 Sum_probs=319.8
Q ss_pred cceeecCCCCCCCCCCCCCchHHHHHhhcccCCCceeeeecCCC---cceeHHHHHHHHHHHHHHHHh---CCCCCC---
Q 013850 9 DGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSD---ESLSFSQFKSIVIKVSHSFRH---LGITKK--- 79 (435)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~---~g~~~g--- 79 (435)
..+||..+.+...+.....|+.++|.++++++|+++|+++.+.+ +.+||+||.+++.++|++|.+ +|+++|
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~ 122 (746)
T PTZ00342 43 SSVYCMKDHKKKSSLYVYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYN 122 (746)
T ss_pred CCceecCchhhcccccccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccc
Confidence 34666444332233223389999999999999999999874323 689999999999999999997 499999
Q ss_pred --------CEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CC
Q 013850 80 --------DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LP 146 (435)
Q Consensus 80 --------d~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~ 146 (435)
|+|+|+++|+++|+++.+||+++|+++||+++.++.+++.++++.++++++|++.+..+.+.... .+
T Consensus 123 ~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~ 202 (746)
T PTZ00342 123 EEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLK 202 (746)
T ss_pred cccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCce
Confidence 99999999999999999999999999999999999999999999999999999887776655432 12
Q ss_pred cEEeccCCcccc-----------------cccc-----------------------------------------cccccc
Q 013850 147 AVLLGSKDKVSS-----------------SGLI-----------------------------------------SRSSKI 168 (435)
Q Consensus 147 ~~~~~~~~~~~~-----------------~~~~-----------------------------------------~~~~~~ 168 (435)
.+++........ .... ......
T Consensus 203 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 282 (746)
T PTZ00342 203 KLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISI 282 (746)
T ss_pred EEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEE
Confidence 233322210000 0000 000011
Q ss_pred cchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHH
Q 013850 169 VSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVF 248 (435)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~ 248 (435)
..|+++.+... .........++++++|+|||||||.||||++||+|+++.+.............++++++++|++|++
T Consensus 283 ~~~~~~~~~~~--~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~ 360 (746)
T PTZ00342 283 ILFDDMTKNKT--TNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIY 360 (746)
T ss_pred EEHHHHHhhcc--cCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHH
Confidence 12233322211 1222344578999999999999999999999999999886654322111122348999999999999
Q ss_pred HHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhc--------ccccC---------------
Q 013850 249 GLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKN--------SLVRK--------------- 305 (435)
Q Consensus 249 g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~--------~~~~~--------------- 305 (435)
++. ..+.++..|+++++.+. ++..+++.|+++++|+++++|.+|..|.+. +..+.
T Consensus 361 ~~~-~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~ 438 (746)
T PTZ00342 361 ERV-IAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNN 438 (746)
T ss_pred HHH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhc
Confidence 995 67788999999998865 899999999999999999999999988752 10000
Q ss_pred -------------------CCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCc
Q 013850 306 -------------------FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSA 366 (435)
Q Consensus 306 -------------------~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 366 (435)
...++||.+++||+++++++.++|++.++ ++++++||+||+++.++...+. ..+.+++
T Consensus 439 ~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g-~~i~~gYGlTEt~~~~~~~~~~--~~~~gsv 515 (746)
T PTZ00342 439 GGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLN-VNYYQGYGLTETTGPIFVQHAD--DNNTESI 515 (746)
T ss_pred CCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC-CCEEEeeccCcccceeeeccCC--CCCcccc
Confidence 01268999999999999999999999886 9999999999998777665544 4578899
Q ss_pred cccc-CCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 367 GTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 367 G~~~-~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
|.|+ |+++++|+|.+++.....++.|||+++||+++.| ||++|+.|++.| +.||||+|||+++
T Consensus 516 G~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~G--Y~~~pe~T~~~f---~~dGW~~TGDig~ 579 (746)
T PTZ00342 516 GGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSG--YFLEKEQTKNAF---TEDGYFKTGDIVQ 579 (746)
T ss_pred cCcCCCcEEEEEecccccccCCCCCceEEEEecCccccc--ccCChhhhhhhc---CcCCcccCCcEEE
Confidence 9998 9999999986665555666789999999999999 999999999987 3578999999863
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.9e-59 Score=460.46 Aligned_cols=392 Identities=34% Similarity=0.495 Sum_probs=325.6
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.+.|.++++.+|+++|+++.+....+||+||.++++++|+.|++.|+++||+|+|+++|++++++++|||+++|+++
T Consensus 11 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~ 90 (534)
T COG0318 11 LTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVA 90 (534)
T ss_pred ccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEE
Confidence 78999999999999999999988533349999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCC---cEEeccCCcccccccccccccc-cchhhhhhhcCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP---AVLLGSKDKVSSSGLISRSSKI-VSFHDLIELSGSVT 182 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 182 (435)
+|+||.+...++.++++.++++++++++.+.+.+...... ...+.... ...... ..+++....... .
T Consensus 91 vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~ 161 (534)
T COG0318 91 VPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVG--------DADDRLPITLEALAAEGPG-P 161 (534)
T ss_pred eecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecc--------cccccccccHHHHhhccCC-c
Confidence 9999999999999999999999999998855544444321 11111110 000000 244555332221 1
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCc
Q 013850 183 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (435)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~ 262 (435)
.......+++++++|+|||||||.||+|++||+|+..+...............|++++.+|++|.+|+...++.++..|+
T Consensus 162 ~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~ 241 (534)
T COG0318 162 DADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGG 241 (534)
T ss_pred ccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCC
Confidence 22222278999999999999999999999999999988776655555112333899999999999999877888899999
Q ss_pred EEEecC--CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcc-eeEEEecCCCCcHHHHHHHHhhCCCCeee
Q 013850 263 CVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISS-LKLVGSGAAPLGKELMEDCQKNIPGATIF 339 (435)
Q Consensus 263 ~i~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~-lr~i~~gG~~l~~~~~~~~~~~~~~~~~~ 339 (435)
++++.+ .+++..++..+.++++|++.++|+++..|+++......++++ ||.++.||+++++++++++++.|+...++
T Consensus 242 ~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~ 321 (534)
T COG0318 242 TLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAIL 321 (534)
T ss_pred EEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceE
Confidence 999997 599999999999999999999999999999998887777776 99999999999999999999999856899
Q ss_pred cCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc
Q 013850 340 QGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 419 (435)
Q Consensus 340 ~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~ 419 (435)
+.||+||+++.++.....+...+.+++|.|+|+++++|+|++++++++ |++|||+++||+++.| ||++|+.|.+.|
T Consensus 322 ~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~G--Y~~~pe~t~~~f- 397 (534)
T COG0318 322 EGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKG--YWNRPEATAEAF- 397 (534)
T ss_pred EeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhh--hcCChHHHHHhh-
Confidence 999999999877776655301467778999999999999976665666 9999999999999999 999999999977
Q ss_pred ccccCcceecCCCC
Q 013850 420 CEHTDSFIRGKDQQ 433 (435)
Q Consensus 420 ~~~~~~~~~tgD~~ 433 (435)
+.+|||+|||++
T Consensus 398 --~~~gW~~TGDlg 409 (534)
T COG0318 398 --DEDGWLRTGDLG 409 (534)
T ss_pred --ccCCeeeecceE
Confidence 225899999986
No 5
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6.6e-59 Score=469.74 Aligned_cols=418 Identities=20% Similarity=0.275 Sum_probs=315.4
Q ss_pred cCccceeecCCCCCCCC--CCCCCchHHHHHhhcccCCCceeeeec-----CCC--cceeHHHHHHHHHHHHHHHHhCCC
Q 013850 6 YGRDGIYRSLRPPLVLP--SDPSFSMVHFLFRNSASYSSKLALIDA-----DSD--ESLSFSQFKSIVIKVSHSFRHLGI 76 (435)
Q Consensus 6 ~~~~~~~~~~~~~~~~~--~~~~~tl~~~l~~~~~~~p~~~a~~~~-----~~~--~~~Ty~el~~~~~~la~~L~~~g~ 76 (435)
..+..+++++..+..++ .....|+.++|.++++++|+++|+... ..+ .++||+||.++++++|++|+++|+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv 101 (666)
T PLN02614 22 PSVGPVYRSIFAKDGFPNPIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGV 101 (666)
T ss_pred CCCCCcccCcccccccCCCCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCC
Confidence 34555666554333332 222259999999999999999999742 112 358999999999999999999999
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC------CCcEEe
Q 013850 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN------LPAVLL 150 (435)
Q Consensus 77 ~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~ 150 (435)
++||+|+|+++|+++|++++|||+++|++++|+++.++.+++.++++.++++++|++++....+.... .+.++.
T Consensus 102 ~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~ 181 (666)
T PLN02614 102 KDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVS 181 (666)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999987655443221 122222
Q ss_pred ccCCccccc-ccccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhh
Q 013850 151 GSKDKVSSS-GLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE 229 (435)
Q Consensus 151 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~ 229 (435)
..+...... ..........++++++..... .........++|+++|+|||||||.||||++||+++...+........
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~ 260 (666)
T PLN02614 182 FGGVSREQKEEAETFGLVIYAWDEFLKLGEG-KQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLK 260 (666)
T ss_pred eCCCChHHhhhhhhcCcEEEEHHHHHhhccc-CCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhcc
Confidence 211000000 000001113456666543321 111223356899999999999999999999999999887655433221
Q ss_pred ---hccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhccccc--
Q 013850 230 ---LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR-- 304 (435)
Q Consensus 230 ---~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~-- 304 (435)
.....+|++++.+|++|+++.. ..+.++..|+++++.+ +++..+++.+++++||+++++|+++..|.+.....
T Consensus 261 ~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~ 338 (666)
T PLN02614 261 SANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLS 338 (666)
T ss_pred ccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHh
Confidence 1122349999999999999985 4566788999998875 58999999999999999999999999886421100
Q ss_pred -----------------------------CC-------------CC-cceeEEEecCCCCcHHHHHHHHhhCCCCeeecC
Q 013850 305 -----------------------------KF-------------DI-SSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 341 (435)
Q Consensus 305 -----------------------------~~-------------~l-~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~ 341 (435)
.. .+ ++||.+++||+++++++ +++.+.+++++++++
T Consensus 339 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~ 417 (666)
T PLN02614 339 DGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQG 417 (666)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEee
Confidence 00 01 68999999999999875 567777766899999
Q ss_pred cCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeC-C-CCccCCCCCceeEEEeCCCccccccccCCccccccccc
Q 013850 342 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSV-D-TLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 419 (435)
Q Consensus 342 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~-~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~ 419 (435)
||+||+++..+...+.+ ..+.+++|+|+||++++|+|. + .+.++++|+.|||+++||+++.| ||++|+.|.+.|
T Consensus 418 YG~TE~~~~~~~~~~~~-~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~G--Y~~~pe~T~~~f- 493 (666)
T PLN02614 418 YGLTESCAGTFVSLPDE-LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSG--YYKREDLTKEVL- 493 (666)
T ss_pred CchHhhhhheeeecccc-CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCccccc--ccCCHHHhhhhh-
Confidence 99999886554433322 235789999999999999983 3 34788999999999999999999 999999999987
Q ss_pred ccccCcceecCCCCC
Q 013850 420 CEHTDSFIRGKDQQT 434 (435)
Q Consensus 420 ~~~~~~~~~tgD~~~ 434 (435)
.+|||+|||+++
T Consensus 494 ---~dGw~~TGDlg~ 505 (666)
T PLN02614 494 ---IDGWLHTGDVGE 505 (666)
T ss_pred ---ccCCcccceEEE
Confidence 378999999874
No 6
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.6e-58 Score=442.21 Aligned_cols=380 Identities=27% Similarity=0.347 Sum_probs=302.5
Q ss_pred CchHHHHHhhcccCCCceeeeecCCC--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
.++.+.+.++++.+|+..|+.....+ +.+||+|+.+++.++|++|++.|+.+||+|+|++.|+++|+++.+||+.+|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~ 95 (613)
T COG1022 16 HTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGA 95 (613)
T ss_pred ccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 67899999999999999899866544 7899999999999999999999997799999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCCeEEEEccccH-HHHhhcCCCcE-Eecc-------CCcc--cccccccccc-cccchh
Q 013850 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELW-DKVKDLNLPAV-LLGS-------KDKV--SSSGLISRSS-KIVSFH 172 (435)
Q Consensus 105 ~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~-~~~~-------~~~~--~~~~~~~~~~-~~~~~~ 172 (435)
+.||+.+..+++++.++|+.+++++||++.... +.+........ +... .... .......... +...+
T Consensus 96 v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (613)
T COG1022 96 VSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLF- 174 (613)
T ss_pred eEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhh-
Confidence 999999999999999999999999999998443 33332221100 0000 0000 0000000000 00111
Q ss_pred hhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHH
Q 013850 173 DLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV 252 (435)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~ 252 (435)
. ..... .........++|+|.|+|||||||.||||++||+|+++++........ ....+|+.++.+|+.|++...+
T Consensus 175 ~-~~~~~--~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~-~~~~~d~~LsfLPlaHi~Er~~ 250 (613)
T COG1022 175 L-IDSAG--LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP-PIGPGDRVLSFLPLAHIFERAF 250 (613)
T ss_pred h-hcccc--cccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC-CCCCCcEEEEeCcHHHHHHHHH
Confidence 0 11110 111225678999999999999999999999999999999998877665 1233499999999999999964
Q ss_pred HHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc-----------------------------
Q 013850 253 ILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV----------------------------- 303 (435)
Q Consensus 253 ~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----------------------------- 303 (435)
.....+..|+++.... ++..+++.+.+++||++.++|.+|+.+.+....
T Consensus 251 ~~~~~~~~g~~~~~~~--~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~ 328 (613)
T COG1022 251 EGGLALYGGVTVLFKE--DPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALL 328 (613)
T ss_pred HHHHHhhcceEEEecC--CHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhc
Confidence 4555566666665544 889999999999999999999999877553000
Q ss_pred --------------------cCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCC
Q 013850 304 --------------------RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRS 363 (435)
Q Consensus 304 --------------------~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~ 363 (435)
.... .++|.+++||+++++++...++.. ++++.++||+||++++++++.+. ..+.
T Consensus 329 ~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~~~--~~~~ 403 (613)
T COG1022 329 GGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVNPPD--RFVL 403 (613)
T ss_pred ccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEcccc--Cccc
Confidence 0111 489999999999999999999888 69999999999999999999888 7899
Q ss_pred CCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 364 GSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 364 ~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+++|+|+|+++++|.|. |||+||||+||+| ||++|+.|.++| +.||||+|||+++
T Consensus 404 gtvG~p~p~~evKI~d~-----------GEilVRG~~Vm~G--Yyk~pe~Taeaf---~~DGWf~TGDlg~ 458 (613)
T COG1022 404 GTVGKPLPGIEVKIADD-----------GEILVRGPNVMKG--YYKNPEATAEAF---TEDGWFRTGDLGE 458 (613)
T ss_pred CCcCCcCCCceEEEccC-----------ceEEEecchhcch--hcCChHHHhhhc---cccCCcccCceeE
Confidence 99999999999999994 9999999999999 999999999999 3599999999864
No 7
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=4.7e-57 Score=450.58 Aligned_cols=412 Identities=36% Similarity=0.596 Sum_probs=333.7
Q ss_pred cceeecCCCCCCCCCCCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcC
Q 013850 9 DGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAP 87 (435)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~ 87 (435)
..+++++.+...+|..++.++.+.+.+. +.+|+++|+++...+..+||.||.++++++|+.|++ .|+++||+|+++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~ 100 (560)
T PLN02574 22 TGIYSSKHPPVPLPSDPNLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLP 100 (560)
T ss_pred CeeecCCCCCCCCCCCCCCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECC
Confidence 4566665555566666667777777766 789999999987655689999999999999999998 99999999999999
Q ss_pred CCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCccccccccccccc
Q 013850 88 NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSK 167 (435)
Q Consensus 88 ~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
|++++++++|||+++|++++|++|.++.+++.++++.+++++++++++....+.......+.+....... .....
T Consensus 101 n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 175 (560)
T PLN02574 101 NSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPENYDFD-----SKRIE 175 (560)
T ss_pred CcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCcccccc-----cCccC
Confidence 9999999999999999999999999999999999999999999999887776655443333222110000 01112
Q ss_pred ccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhh--hh-ccCCCcEEEecchH
Q 013850 168 IVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ--EL-VGELDHVVLCVLPM 244 (435)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~-~~~~~d~~l~~~~l 244 (435)
...++++..... .........++++++|+|||||||.||+|.++|+++...+....... .. ....+++++..+|+
T Consensus 176 ~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 253 (560)
T PLN02574 176 FPKFYELIKEDF--DFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPM 253 (560)
T ss_pred cccHHHHhhcCC--cccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecch
Confidence 234555444332 22233445678999999999999999999999999988765443211 11 11234889999999
Q ss_pred HHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc-cCCCCcceeEEEecCCCCcH
Q 013850 245 FHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV-RKFDISSLKLVGSGAAPLGK 323 (435)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~-~~~~l~~lr~i~~gG~~l~~ 323 (435)
+|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+.... ...++++||.+++||+++++
T Consensus 254 ~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~ 333 (560)
T PLN02574 254 FHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSG 333 (560)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCH
Confidence 99999977788888999999999999999999999999999999999999999987543 34568899999999999999
Q ss_pred HHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccc
Q 013850 324 ELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTP 403 (435)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~ 403 (435)
++.+++.+.++++++++.||+||++.+...........+.+++|+++++++++|+|++++++++.|+.|||+++|++++.
T Consensus 334 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~~ 413 (560)
T PLN02574 334 KFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVMK 413 (560)
T ss_pred HHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchhh
Confidence 99999999997799999999999886654332222234678999999999999999889999999999999999999999
Q ss_pred cccccCCcccccccccccccCcceecCCCC
Q 013850 404 GIVYINFFVFTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 404 g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~ 433 (435)
| ||++++.+.+.| ..+|||+|||++
T Consensus 414 G--Y~~~~~~t~~~~---~~~g~~~TGDlg 438 (560)
T PLN02574 414 G--YLNNPKATQSTI---DKDGWLRTGDIA 438 (560)
T ss_pred h--hcCChhHhhhhc---cCCCCcccceEE
Confidence 9 999999998866 357899999976
No 8
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.4e-57 Score=432.53 Aligned_cols=367 Identities=25% Similarity=0.355 Sum_probs=307.6
Q ss_pred CchHHH-HHhhcc-cCCCceeeeecCCC---cceeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 013850 27 FSMVHF-LFRNSA-SYSSKLALIDADSD---ESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVI 100 (435)
Q Consensus 27 ~tl~~~-l~~~~~-~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~ 100 (435)
.|+... ++++.. ..+++.|++...+. +.+||+||.+.++++|+.|++ .|+ +||||++++|+.+|.++++|||+
T Consensus 8 lN~~~n~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~ 86 (528)
T COG0365 8 LNLALNALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATA 86 (528)
T ss_pred eechhhhhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHH
Confidence 555444 455553 45789999866322 789999999999999999986 678 99999999999999999999999
Q ss_pred HcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCc--------EEeccCCcccccccccccccccchh
Q 013850 101 AIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPA--------VLLGSKDKVSSSGLISRSSKIVSFH 172 (435)
Q Consensus 101 ~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (435)
++|++.+|+.+.++++.+...+++++++++|+++......+....+. +++.... . ..|.
T Consensus 87 riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~------------~-~~~~ 153 (528)
T COG0365 87 RIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRL------------G-LWYD 153 (528)
T ss_pred HcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccc------------c-ccHH
Confidence 99999999999999999999999999999999987776555443211 2222110 1 6677
Q ss_pred hhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHH
Q 013850 173 DLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV 252 (435)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~ 252 (435)
+..+... ........+.+|+++|+|||||||+||+|+|+|..++............ ...+|++++..++.|++|.++
T Consensus 154 ~~~~~~~--~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~-~~~~Dv~w~~ad~GW~~g~~~ 230 (528)
T COG0365 154 EAVEKAS--EKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGD-LLPGDRFWNSSDPGWIYGLWY 230 (528)
T ss_pred HHhhccC--CCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhC-CCCCCEEEeCCCchhhhCchH
Confidence 7776555 4555566899999999999999999999999999887776554432222 225599999999999999998
Q ss_pred HHHhhhhcCcEEEecCC--C-CHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHH
Q 013850 253 ILYDQLQKGNCVVSMGK--F-DIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDC 329 (435)
Q Consensus 253 ~~~~~l~~G~~i~~~~~--~-~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~ 329 (435)
.++.+|..|+++++.+. + ++..+++.++++++|.+++.|+.++.|.+....+.+++++||.+.+.|||++++.++++
T Consensus 231 ~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~ 310 (528)
T COG0365 231 SVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWF 310 (528)
T ss_pred HHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHH
Confidence 89999999999998853 2 49999999999999999999999999999877667899999999999999999999999
Q ss_pred HhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCC--Cccccccc
Q 013850 330 QKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP--NVTPGIVY 407 (435)
Q Consensus 330 ~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~--~~~~g~~y 407 (435)
.+.++ +++.+.||+||+++......+ ..++++.|+|+||+++.|+|. +|+++++|+ |+|+++.+ +++.+ |
T Consensus 311 ~~~~g-~~i~d~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd-~g~~~~~~~-G~Lvi~~~~p~~~~~--~ 382 (528)
T COG0365 311 YSALG-VWILDIYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDD-EGNPVPPGV-GELVVRLPWPGMALT--Y 382 (528)
T ss_pred HHHhC-CCEeccccccccCccccCCCC---CcCCCCCCCCCCCceeEEECC-CCCcCCCCc-eEEEEeCCCchhhhh--h
Confidence 99998 999999999999965555444 234555599999999999995 499999999 99999997 89999 9
Q ss_pred cCCcccccccc
Q 013850 408 INFFVFTLFLW 418 (435)
Q Consensus 408 ~~~~~~~~~~~ 418 (435)
|+|++.+.+.+
T Consensus 383 w~d~er~~~~y 393 (528)
T COG0365 383 WNDPERYKEAY 393 (528)
T ss_pred hCCHHHHHHHH
Confidence 99999988876
No 9
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.7e-57 Score=458.41 Aligned_cols=396 Identities=19% Similarity=0.252 Sum_probs=304.7
Q ss_pred CchHHHHHhhcccCCCceeeeec-----CCC--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013850 27 FSMVHFLFRNSASYSSKLALIDA-----DSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~-----~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 99 (435)
.|+.++|.+.++++|+++|+... ..+ +++||+||.++++++|++|+++|+++||+|+|+++|+++|++++|||
T Consensus 43 ~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 122 (660)
T PLN02861 43 DSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (660)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 68999999999999999999642 112 47999999999999999999999999999999999999999999999
Q ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC------CCcEEeccCCcccc-cccccccccccchh
Q 013850 100 IAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN------LPAVLLGSKDKVSS-SGLISRSSKIVSFH 172 (435)
Q Consensus 100 ~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 172 (435)
+++|++++|+++.++.+++.++++.++++++|++++..+.+.... .+.++...+..... ...........+|+
T Consensus 123 ~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 202 (660)
T PLN02861 123 NSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWE 202 (660)
T ss_pred HHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHH
Confidence 999999999999999999999999999999999877655543321 22233222110000 00000111234566
Q ss_pred hhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhc---cCCCcEEEecchHHHHHH
Q 013850 173 DLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV---GELDHVVLCVLPMFHVFG 249 (435)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~---~~~~d~~l~~~~l~~~~g 249 (435)
++..... .........++++++|+|||||||.||||++||++++..+.......... ...+|++++.+|++|+++
T Consensus 203 ~~~~~~~--~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~ 280 (660)
T PLN02861 203 EFSLMGS--LDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYD 280 (660)
T ss_pred HHHHhCc--ccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHH
Confidence 6654332 11222345689999999999999999999999999988765543322211 123499999999999999
Q ss_pred HHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcc----------------------------
Q 013850 250 LSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNS---------------------------- 301 (435)
Q Consensus 250 ~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~---------------------------- 301 (435)
.. ..+.++..|+++++.. +++..+++.|+++++|+++++|+++..|.+..
T Consensus 281 ~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~ 358 (660)
T PLN02861 281 QV-IETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRK 358 (660)
T ss_pred HH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhc
Confidence 86 4556899999998874 68999999999999999999999999886410
Q ss_pred ---------cccCC-------CC-cceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCC
Q 013850 302 ---------LVRKF-------DI-SSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSG 364 (435)
Q Consensus 302 ---------~~~~~-------~l-~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 364 (435)
..... .+ .+||.+++||+++++++. +|.+.++...++++||+||+++.++...... ..+.+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~g 436 (660)
T PLN02861 359 GLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSIANV-FSMVG 436 (660)
T ss_pred CCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeeccccc-CCCCC
Confidence 00000 11 579999999999999975 5666666457999999999887655433321 33578
Q ss_pred CcccccCCcEEEEEe-CCCC-ccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 365 SAGTLVAGVEAQIVS-VDTL-KPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 365 ~~G~~~~~~~~~i~d-~~~~-~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
++|+|+++++++|+| +++| ..+.+++.|||+++||+++.| ||++|+.|.+.| .+|||+|||+++
T Consensus 437 svG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~G--Y~~~pe~T~~~f----~dGw~~TGDlg~ 502 (660)
T PLN02861 437 TVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSG--YHKRQDLTEEVL----IDGWFHTGDIGE 502 (660)
T ss_pred CccCccCceEEEEEEccccCcccCCCCCceeEEEcCCccccc--ccCCHHHHHhhh----hccCcccCceEE
Confidence 999999999999998 3444 344566789999999999999 999999999988 378999999874
No 10
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=5.4e-57 Score=427.66 Aligned_cols=401 Identities=24% Similarity=0.284 Sum_probs=325.9
Q ss_pred CCCCchHHHHHhhcccCCCceeeeecC----CC--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHH
Q 013850 24 DPSFSMVHFLFRNSASYSSKLALIDAD----SD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL 97 (435)
Q Consensus 24 ~~~~tl~~~l~~~~~~~p~~~a~~~~~----~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~l 97 (435)
....|+.+.|.+.+..+|+.+++-... .+ +++||+|..+++.+++..|+++|+++++.|+|+.-|++||+++.+
T Consensus 72 ~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~ 151 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEM 151 (691)
T ss_pred CCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHH
Confidence 445899999999999999999996543 12 789999999999999999999999999999999999999999999
Q ss_pred HHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEc-cccHHHHhhcC-------CCcEEeccCC-cccccccccccccc
Q 013850 98 GVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV-PELWDKVKDLN-------LPAVLLGSKD-KVSSSGLISRSSKI 168 (435)
Q Consensus 98 A~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~-~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~ 168 (435)
||...|.+.||+-..++++.+.++++.+...++||| +..++.+.+.. .+.+++.... +............+
T Consensus 152 a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v 231 (691)
T KOG1256|consen 152 ACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEV 231 (691)
T ss_pred HHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEE
Confidence 999999999999999999999999999999999999 55555554422 3333333332 11122223334568
Q ss_pred cchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh--c-cC-CCcEEEecchH
Q 013850 169 VSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL--V-GE-LDHVVLCVLPM 244 (435)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~--~-~~-~~d~~l~~~~l 244 (435)
.+|+++++.+......+.....|+|.+.|.|||||||.||||++||+|+...+......... . .. ..|++++++|+
T Consensus 232 ~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPL 311 (691)
T KOG1256|consen 232 YSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPL 311 (691)
T ss_pred EEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcH
Confidence 99999999886422222258899999999999999999999999999999965532222111 1 12 23999999999
Q ss_pred HHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcc-----------------------
Q 013850 245 FHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNS----------------------- 301 (435)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~----------------------- 301 (435)
.|++... .-+..++.|+++.+.. -|+..+.+.|++.+||.+.++|.+|.++.+..
T Consensus 312 AHi~er~-~~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~ 389 (691)
T KOG1256|consen 312 AHIFERV-VELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKL 389 (691)
T ss_pred HHHHHHH-HHHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 9999996 4455568999999997 48899999999999999999999988775530
Q ss_pred ---cccCCC-------------------CcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCC
Q 013850 302 ---LVRKFD-------------------ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG 359 (435)
Q Consensus 302 ---~~~~~~-------------------l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~ 359 (435)
..++.. -..+|.+++|++|+++++.+.++..++ ++++++||+||+++......+.
T Consensus 390 ~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g-~~v~eGYGlTEts~g~~~~~~~-- 466 (691)
T KOG1256|consen 390 EHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG-CRVLEGYGLTETSAGTTLTLPG-- 466 (691)
T ss_pred HHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC-ceeeecccccccCCceEeccCC--
Confidence 001100 147899999999999999999999997 9999999999999666666555
Q ss_pred CcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 360 VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 360 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+...+++|.|+|+++++++|+..-.--+.+..||||+||++||.| ||++|+.|.+.+ +.|||++|||+|+
T Consensus 467 d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~G--YyK~p~~T~e~i---deDGWLhTGDiG~ 536 (691)
T KOG1256|consen 467 DNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMG--YYKDPEKTAEAI---DEDGWLHTGDIGE 536 (691)
T ss_pred CCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhcee--ccCChHHHhhhh---cccccccccccee
Confidence 338899999999999999996555555556689999999999999 999999999988 5789999999885
No 11
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.4e-56 Score=453.79 Aligned_cols=395 Identities=21% Similarity=0.252 Sum_probs=312.4
Q ss_pred CchHHHHHhhcccCCCceeeee---cCC--C--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013850 27 FSMVHFLFRNSASYSSKLALID---ADS--D--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~---~~~--~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 99 (435)
.|+.++|.++++++|+++|+.. .+. + +.+||+||.++++++|++|+++|+++||+|+|+++|+++|+++++||
T Consensus 44 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 123 (651)
T PLN02736 44 GTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHAC 123 (651)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 6899999999999999999942 221 1 46999999999999999999999999999999999999999999999
Q ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCccccc-ccccccccccchhh
Q 013850 100 IAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSS-GLISRSSKIVSFHD 173 (435)
Q Consensus 100 ~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 173 (435)
+++|++++|+++.++.+++.++++.++++++|++.+..+.+.... .+.+++......... ...........+++
T Consensus 124 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (651)
T PLN02736 124 SAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSK 203 (651)
T ss_pred HHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHH
Confidence 999999999999999999999999999999999987766554422 122222211000000 00001122456666
Q ss_pred hhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHH
Q 013850 174 LIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVI 253 (435)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~ 253 (435)
+++.... .........++++++|+|||||||.||||++||+++...+........+. .+|++++.+|++|.+++. .
T Consensus 204 ~~~~~~~-~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~--~~d~~l~~lPl~h~~~~~-~ 279 (651)
T PLN02736 204 LLAQGRS-SPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFY--PSDVHISYLPLAHIYERV-N 279 (651)
T ss_pred HHHhccc-CCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCC--CCCEEEEeCCHHHHHHHH-H
Confidence 6654321 11122345789999999999999999999999999998877665544443 349999999999999996 6
Q ss_pred HHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc----------------------------cC
Q 013850 254 LYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV----------------------------RK 305 (435)
Q Consensus 254 ~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----------------------------~~ 305 (435)
++.++..|+++++.+. ++..+++.++++++|+++++|+++..|.+.... ..
T Consensus 280 ~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (651)
T PLN02736 280 QIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNP 358 (651)
T ss_pred HHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 7888999999988764 788999999999999999999999887653110 00
Q ss_pred -------------CCC-cceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccC
Q 013850 306 -------------FDI-SSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVA 371 (435)
Q Consensus 306 -------------~~l-~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~ 371 (435)
..+ ++||.+++||+++++++.+++++.++ .++++.||+||+++.++..... ..+.+++|+|+|
T Consensus 359 ~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g-~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p 435 (651)
T PLN02736 359 SPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG-GRVLEGYGMTETSCVISGMDEG--DNLSGHVGSPNP 435 (651)
T ss_pred CchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC-CCeEEEechHHhchheeccCCC--CCCCCccCCccC
Confidence 001 48999999999999999999999886 8999999999998776655443 456789999999
Q ss_pred CcEEEEEeCCCCc---cCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 372 GVEAQIVSVDTLK---PLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 372 ~~~~~i~d~~~~~---~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
|++++|+|.+++. ...+++.|||+++||+++.| ||++++.|.+.| ..+|||+|||+++
T Consensus 436 g~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~G--Y~~~~~~t~~~~---~~dgw~~TGDlg~ 496 (651)
T PLN02736 436 ACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKG--YYKDEVQTREVI---DEDGWLHTGDIGL 496 (651)
T ss_pred ceEEEEEEccccCcccCCCCCCCceEEecCCccccc--cccCHHHHHhhh---ccCCCeeccceEE
Confidence 9999999854432 22344579999999999999 999999998877 3578999999874
No 12
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.2e-55 Score=439.01 Aligned_cols=408 Identities=36% Similarity=0.583 Sum_probs=336.2
Q ss_pred cceeecCCCCCCCCCCCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC
Q 013850 9 DGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN 88 (435)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~ 88 (435)
-.++++-.+....|.. .|+.+++.++++++|+++|+++.+.++.+||.||.++++++|+.|++.|+++||+|+++++|
T Consensus 7 ~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~ 84 (537)
T PLN02246 7 EFIFRSKLPDIYIPNH--LPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPN 84 (537)
T ss_pred eeEecCCCCCCCCCCC--CcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 3567777777777766 89999999999999999999987556789999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC--CcEEeccCCcccccccccccc
Q 013850 89 SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL--PAVLLGSKDKVSSSGLISRSS 166 (435)
Q Consensus 89 ~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 166 (435)
+++++++++||+++|++++|+++.++.+++..+++.++++++|+++...+.+..... ...++..+. ...
T Consensus 85 ~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~---------~~~ 155 (537)
T PLN02246 85 CPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDD---------PPE 155 (537)
T ss_pred ChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCC---------CCC
Confidence 999999999999999999999999999999999999999999999887766544321 112222111 111
Q ss_pred cccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhh--hhccCCCcEEEecchH
Q 013850 167 KIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ--ELVGELDHVVLCVLPM 244 (435)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~d~~l~~~~l 244 (435)
....+.++..... ...+.....++++++++|||||||.||+|.++|+++........... .+....+|++++.+|+
T Consensus 156 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 233 (537)
T PLN02246 156 GCLHFSELTQADE--NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPM 233 (537)
T ss_pred CceeHHHHhcCCC--CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeech
Confidence 2233444433222 22233445789999999999999999999999999987755432211 1222334999999999
Q ss_pred HHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHH
Q 013850 245 FHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKE 324 (435)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~ 324 (435)
+|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+........++++|.+++||++++++
T Consensus 234 ~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~ 313 (537)
T PLN02246 234 FHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKE 313 (537)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHH
Confidence 99999876788899999999999999999999999999999999999999999987766666788999999999999999
Q ss_pred HHHHHHhhCCCCeeecCcCcccccccccccCC---CCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCc
Q 013850 325 LMEDCQKNIPGATIFQGYGMTETCAPISLENP---LVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNV 401 (435)
Q Consensus 325 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~ 401 (435)
+.+.+++.++++.+++.||+||++.+++.... .....+++++|+|+++++++|+|++++++++.|+.|||+++|+.+
T Consensus 314 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~ 393 (537)
T PLN02246 314 LEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQI 393 (537)
T ss_pred HHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCch
Confidence 99999999988999999999998876543211 111345678999999999999998889999999999999999999
Q ss_pred cccccccCCcccccccccccccCcceecCCCCC
Q 013850 402 TPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 402 ~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+.| ||++++.+.+.+ ..++||+|||+++
T Consensus 394 ~~G--Y~~~~~~~~~~~---~~~~~~~TGD~~~ 421 (537)
T PLN02246 394 MKG--YLNDPEATANTI---DKDGWLHTGDIGY 421 (537)
T ss_pred hcc--ccCCchhhhhcc---cCCCCeeecceEE
Confidence 999 999999988765 3578999999763
No 13
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.3e-56 Score=440.93 Aligned_cols=386 Identities=20% Similarity=0.249 Sum_probs=312.2
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.+.|.+.++++|+++|+++.. ...+||+||.++++++|+.|.+ .+||+|+|+++|++++++++|||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~v~ 94 (539)
T PRK06334 19 KTVLESFLKLCSEMTTATVCWDEQ-LGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGKIP 94 (539)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCC-CCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCCee
Confidence 679999999999999999998763 3689999999999999999987 489999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC------CcEEeccCCcccccccccccccccchhhhhhhc--
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL------PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELS-- 178 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 178 (435)
+|+++.++.+++.++++.+++++++++.+....+..... ..++...+. . ....+.+.....
T Consensus 95 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~-~~~~~~~~~~~~~~ 163 (539)
T PRK06334 95 VMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEV----------R-KELSFWEKCRIGIY 163 (539)
T ss_pred EecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehh----------h-hhccHHHhhhhhhh
Confidence 999999999999999999999999999877665543321 111111110 0 000011100000
Q ss_pred --CCC----CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHH
Q 013850 179 --GSV----TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV 252 (435)
Q Consensus 179 --~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~ 252 (435)
... .........++++++|+|||||||.||+|.++|+++............. ..+|++++.+|++|.+++..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~h~~g~~~ 241 (539)
T PRK06334 164 MSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSP--KEDDVMMSFLPPFHAYGFNS 241 (539)
T ss_pred hcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCC--CCCceEEEecchHhhhhhHH
Confidence 000 0011234578999999999999999999999999998876554443333 33499999999999999976
Q ss_pred HHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHh
Q 013850 253 ILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQK 331 (435)
Q Consensus 253 ~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~ 331 (435)
.++.++..|+++++.. .+++..+++.|+++++|++.++|+++..|++........+++||.+++||+++++++.+++++
T Consensus 242 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~ 321 (539)
T PRK06334 242 CTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALK 321 (539)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHH
Confidence 6888999999998875 579999999999999999999999999999876666677899999999999999999999999
Q ss_pred hCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCc
Q 013850 332 NIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFF 411 (435)
Q Consensus 332 ~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~ 411 (435)
.++++.+++.||+||++.++....... ....+++|+|++|++++|+|++++.++++|+.|||+++|++++.| ||+++
T Consensus 322 ~~~~~~i~~~YG~TE~~~~~~~~~~~~-~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~G--Y~~~~ 398 (539)
T PRK06334 322 TFPHIQLRQGYGTTECSPVITINTVNS-PKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSG--YLGED 398 (539)
T ss_pred HCCCCeEEecccccccCceEEeccCCC-CCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCccccc--ccCCc
Confidence 998799999999999987666543322 334568999999999999997789999999999999999999999 99999
Q ss_pred ccccccccccccCcceecCCCCC
Q 013850 412 VFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 412 ~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+.+... ..+.++||+|||+++
T Consensus 399 ~~~~~~--~~~~~~w~~TGD~g~ 419 (539)
T PRK06334 399 FGQGFV--ELGGETWYVTGDLGY 419 (539)
T ss_pred ccccce--eeCCceeEECCCEEE
Confidence 865432 123467999999863
No 14
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=9.8e-55 Score=433.03 Aligned_cols=411 Identities=31% Similarity=0.507 Sum_probs=334.4
Q ss_pred CccceeecCCCCCCCCCCCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEc
Q 013850 7 GRDGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFA 86 (435)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~ 86 (435)
++..+++++.++...|.. .|+.+.|.+.++.+|+++|+++...++.+||.||.+++.++|+.|++.|+++||+|++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~ 87 (546)
T PLN02330 10 DNEHIFRSRYPSVPVPDK--LTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVL 87 (546)
T ss_pred ccceeeccCCCCCCCCCC--CcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence 444677777777655554 899999999999999999999765468999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccc
Q 013850 87 PNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSS 166 (435)
Q Consensus 87 ~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (435)
+|+++++++++||+++|++++|+++..+.+++..+++.++++++++++...+.+.......+.+... ...
T Consensus 88 ~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~----------~~~ 157 (546)
T PLN02330 88 PNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEE----------KIE 157 (546)
T ss_pred CCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCC----------CCC
Confidence 9999999999999999999999999999999999999999999999998887776654443333211 111
Q ss_pred cccchhhhhhhcCCC-CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHH
Q 013850 167 KIVSFHDLIELSGSV-TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMF 245 (435)
Q Consensus 167 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~ 245 (435)
....+.++++..... .........++++++|+|||||||.||+|.++|+++...+..............++.+..+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (546)
T PLN02330 158 GAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFF 237 (546)
T ss_pred CcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChH
Confidence 233455555433211 1112334567899999999999999999999999998765432211111111226899999999
Q ss_pred HHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCc--ceeEEEecCCCCcH
Q 013850 246 HVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDIS--SLKLVGSGAAPLGK 323 (435)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~--~lr~i~~gG~~l~~ 323 (435)
|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|++.......++. ++|.+++||+++++
T Consensus 238 h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~ 317 (546)
T PLN02330 238 HIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAP 317 (546)
T ss_pred HHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCH
Confidence 9999876788999999999999999999999999999999999999999999987655444454 47899999999999
Q ss_pred HHHHHHHhhCCCCeeecCcCcccccccccccC-CCC--CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCC
Q 013850 324 ELMEDCQKNIPGATIFQGYGMTETCAPISLEN-PLV--GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPN 400 (435)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~-~~~--~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~ 400 (435)
++.+++.+.|+++++++.||+||++.+..... +.. ...+.+++|.|+++++++|+|++++++++.|+.|||+++|+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~ 397 (546)
T PLN02330 318 ELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQC 397 (546)
T ss_pred HHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecch
Confidence 99999999997799999999999876543221 111 123456899999999999999888999999999999999999
Q ss_pred ccccccccCCcccccccccccccCcceecCCCCC
Q 013850 401 VTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 401 ~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
++.| |+++++.+.+.+ +.++||+|||+++
T Consensus 398 ~~~g--y~~~~~~~~~~~---~~~g~~~TGD~~~ 426 (546)
T PLN02330 398 VMQG--YYNNKEETDRTI---DEDGWLHTGDIGY 426 (546)
T ss_pred hhhh--hccCccchhhhc---cCCCceecccEEE
Confidence 9999 999999988765 4578999999864
No 15
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.1e-55 Score=446.31 Aligned_cols=399 Identities=22% Similarity=0.258 Sum_probs=303.5
Q ss_pred CchHHHHHhhcccCCCceeeeec----------CCC-----------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDA----------DSD-----------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIF 85 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~ 85 (435)
.|+.++|.+.++.+|+++|+... .++ .++||+||.++++++|+.|.++|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 79999999999999999999431 012 248999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCcccccc
Q 013850 86 APNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSG 160 (435)
Q Consensus 86 ~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 160 (435)
++|++||++++|||+++|++++|+++.++.+++.++++.++++++|++.+....+.... .+.++...+.......
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~ 217 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSDS 217 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhhh
Confidence 99999999999999999999999999999999999999999999999987766654432 2223322221100000
Q ss_pred c--ccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEE
Q 013850 161 L--ISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVV 238 (435)
Q Consensus 161 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~ 238 (435)
. ........+|+++...+.. .........++|+++|+|||||||.||||++||+++...+........ ....+|++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~-~~~~~d~~ 295 (696)
T PLN02387 218 SLSGSSNWTVSSFSEVEKLGKE-NPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVP-KLGKNDVY 295 (696)
T ss_pred hhhccCCcEEEEHHHHHHhhcc-CCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcC-CCCCCCEE
Confidence 0 0011123456666554331 112223456899999999999999999999999999987665443221 12234999
Q ss_pred EecchHHHHHHHHHHHHhhhhcCcEEEecCCCC--------HHHHHHHHHhcCceEEEecHHHHHHHHhccccc------
Q 013850 239 LCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD--------IEMALRAIEKYRVTVWWVVPPIILALAKNSLVR------ 304 (435)
Q Consensus 239 l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~--------~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~------ 304 (435)
++++|++|++++. ..+.++..|+++.+..... +..+++.++++++|++.++|.++..|.+.....
T Consensus 296 l~~lPl~Hi~~~~-~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~ 374 (696)
T PLN02387 296 LAYLPLAHILELA-AESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGG 374 (696)
T ss_pred EEECcHHHHHHHH-HHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccH
Confidence 9999999999985 4455677788777654321 234567899999999999999999887532100
Q ss_pred ------------------C---------C-------------CC-cceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcC
Q 013850 305 ------------------K---------F-------------DI-SSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYG 343 (435)
Q Consensus 305 ------------------~---------~-------------~l-~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG 343 (435)
. . .+ +++|.+++||+++++++.+.++..++ ++++++||
T Consensus 375 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g-~~v~~~YG 453 (696)
T PLN02387 375 LAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLG-APIGQGYG 453 (696)
T ss_pred HHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcC-CCeeEeec
Confidence 0 0 01 58999999999999999988888886 99999999
Q ss_pred cccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCC-CccC--CCCCceeEEEeCCCccccccccCCcccccccccc
Q 013850 344 MTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDT-LKPL--PPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC 420 (435)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~-~~~~--~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~ 420 (435)
+||+++.++..... ....+++|.|+|+++++|+|+++ +..+ .+++.|||+++||+++.| ||++|+.|.+.|.
T Consensus 454 ~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~G--Y~~~pe~T~~~f~- 528 (696)
T PLN02387 454 LTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLG--YFKNQEKTDEVYK- 528 (696)
T ss_pred hhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccch--hcCCHHHHhhhhc-
Confidence 99998776665443 44678999999999999999433 4333 345679999999999999 9999999999871
Q ss_pred cccC--cceecCCCCC
Q 013850 421 EHTD--SFIRGKDQQT 434 (435)
Q Consensus 421 ~~~~--~~~~tgD~~~ 434 (435)
.+.+ +||+|||+++
T Consensus 529 ~d~~G~~W~~TGDig~ 544 (696)
T PLN02387 529 VDERGMRWFYTGDIGQ 544 (696)
T ss_pred cccCCCceeecCceEE
Confidence 1223 4999999874
No 16
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.7e-56 Score=431.74 Aligned_cols=381 Identities=34% Similarity=0.517 Sum_probs=302.8
Q ss_pred HHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC
Q 013850 33 LFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV 112 (435)
Q Consensus 33 l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~ 112 (435)
|+++++++|+++|+++ +.++++||+||.++++++|..|+++|+++||+|+++++|+++++++++||+++|++++|++|.
T Consensus 1 f~~~a~~~pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~ 79 (417)
T PF00501_consen 1 FERQAQRYPDRIALID-DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPS 79 (417)
T ss_dssp HHHHHHHSTTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETT
T ss_pred ChhHHhhCCCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccccccc
Confidence 5789999999999999 446999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCeEEEE----ccccHHHHhhcC----CCcEEeccCCcccccccccccccccchhhhhhhcCCCCCC
Q 013850 113 YTVSELSKQVKDSNPKLVIT----VPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDI 184 (435)
Q Consensus 113 ~~~~~~~~~l~~~~~~~vi~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (435)
++.+++.++++.++++++|+ +......+.... ....++..+. ......+.+..... ...
T Consensus 80 ~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~ 146 (417)
T PF00501_consen 80 LSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDR-----------DDLPKKEALKSASL--SDE 146 (417)
T ss_dssp SSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESH-----------SSCTTCHHHHHHHH--CHC
T ss_pred cccccccccccccceeEEEEeccccccccccchhhhcccccccccccccc-----------cccccccccccccc--ccc
Confidence 99999999999999999997 222222222221 1111111110 00001111111100 000
Q ss_pred CCCC-CCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcE
Q 013850 185 PDVS-VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (435)
Q Consensus 185 ~~~~-~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~ 263 (435)
.... ..++++++++|||||||.||+|.++|+++++.+..+.... ..... |++++.+|++|.+|+...++.++..|++
T Consensus 147 ~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~-~~~~~-d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 224 (417)
T PF00501_consen 147 PQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPE-YFGLG-DRILSFLPLSHIFGLISALLAALFSGAT 224 (417)
T ss_dssp SHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHH-TTTTT-TEEEESS-TTSHHHHHHHHHHHHHCTSE
T ss_pred cccCCCCccceeEeecccccccccccccccccccccccccccccc-ccccC-ceEEeecccccccccccccccccccccc
Confidence 0000 0679999999999999999999999999999877754111 11111 6999999999999996799999999999
Q ss_pred EEecCCCC---HHHHHHHHHhcCceEEEecHHHHHHHHhccccc----CCCCcceeEEEecCCCCcHHHHHHHHhhCCCC
Q 013850 264 VVSMGKFD---IEMALRAIEKYRVTVWWVVPPIILALAKNSLVR----KFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (435)
Q Consensus 264 i~~~~~~~---~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~----~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 336 (435)
+++.+... +..+++.++++++|++.++|+++..|++....+ ..++++||.++++|+++++++.+++++.++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~ 304 (417)
T PF00501_consen 225 LVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNA 304 (417)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTS
T ss_pred ccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccc
Confidence 99998654 477899999999999999999999999843222 35788999999999999999999999999845
Q ss_pred eeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccc
Q 013850 337 TIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLF 416 (435)
Q Consensus 337 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~ 416 (435)
++++.||+||++.++..........+.+++|.|+++++++|+|+++++++++|+.|||+++||.++.| |+++++.+.+
T Consensus 305 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~g--y~~~~~~~~~ 382 (417)
T PF00501_consen 305 PIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSG--YYNDPELTAE 382 (417)
T ss_dssp EEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSE--ETTBHHHHHH
T ss_pred cceecccccccceeeecccccccccccccccccccccccccccccccccccccccccccccCCcccee--eecccccccc
Confidence 99999999999998875532222457789999999999999998779999999999999999999999 9999999999
Q ss_pred cccccccCcceecCCCCC
Q 013850 417 LWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 417 ~~~~~~~~~~~~tgD~~~ 434 (435)
.|. .+|||+|||+++
T Consensus 383 ~~~---~~~~~~TGD~g~ 397 (417)
T PF00501_consen 383 AFI---DDGWYRTGDLGR 397 (417)
T ss_dssp HEE---TTSEEEEEEEEE
T ss_pred ccc---cccceecceEEE
Confidence 873 357999999874
No 17
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=5.5e-55 Score=442.02 Aligned_cols=400 Identities=22% Similarity=0.278 Sum_probs=308.1
Q ss_pred CchHH-HHHhhcc-cCCCceeeeecC----CCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 013850 27 FSMVH-FLFRNSA-SYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVI 100 (435)
Q Consensus 27 ~tl~~-~l~~~~~-~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~ 100 (435)
.|+.. +|.++++ .+|+++|++... ..+.+||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+
T Consensus 87 ~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~ 166 (666)
T PLN02654 87 TNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACA 166 (666)
T ss_pred eeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 66754 4455654 589999998632 13689999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC------------------CCcEEeccCCccc-cccc
Q 013850 101 AIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN------------------LPAVLLGSKDKVS-SSGL 161 (435)
Q Consensus 101 ~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~------------------~~~~~~~~~~~~~-~~~~ 161 (435)
++|++++|+++.++.+++..+++.++++++|+++......+... ....+........ ....
T Consensus 167 ~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (666)
T PLN02654 167 RIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDT 246 (666)
T ss_pred HcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccccccc
Confidence 99999999999999999999999999999999876432211100 0011111110000 0000
Q ss_pred ccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHH-HHHhhhhhccCCCcEEEe
Q 013850 162 ISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASL-MISAHQELVGELDHVVLC 240 (435)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~~~d~~l~ 240 (435)
.........|+++....+ .........++++++|+|||||||.||||+++|.+++.... .......+ ..+|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~--~~~d~~~~ 322 (666)
T PLN02654 247 KWQEGRDVWWQDVVPNYP--TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDY--KPTDVYWC 322 (666)
T ss_pred ccccCCcccHHHHhhcCC--CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCC--CCCcEEEE
Confidence 000001122444432211 12223345789999999999999999999999999865432 22222333 33499999
Q ss_pred cchHHHHHHHHHHHHhhhhcCcEEEecCC----CCHHHHHHHHHhcCceEEEecHHHHHHHHhccc--ccCCCCcceeEE
Q 013850 241 VLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLV 314 (435)
Q Consensus 241 ~~~l~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~i 314 (435)
..|++|+++..+.++.+|..|+++++.++ +++..+++.|+++++|++.++|+++..|.+... ....++++||.+
T Consensus 323 ~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i 402 (666)
T PLN02654 323 TADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVL 402 (666)
T ss_pred cCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEE
Confidence 99999999987778999999999999863 479999999999999999999999999998653 234578899999
Q ss_pred EecCCCCcHHHHHHHHhhCCC--CeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCce
Q 013850 315 GSGAAPLGKELMEDCQKNIPG--ATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLG 392 (435)
Q Consensus 315 ~~gG~~l~~~~~~~~~~~~~~--~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~G 392 (435)
+++|+++++++.+++.+.++. +++.+.||+||+++......+.....+++++|.|++|++++|+| ++|+.++.++.|
T Consensus 403 ~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~~~~G 481 (666)
T PLN02654 403 GSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEIEGECSG 481 (666)
T ss_pred EEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCCCCCCce
Confidence 999999999999999999974 68999999999987665544332245678999999999999999 588999989999
Q ss_pred eEEEeC--CCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 393 EIWVRG--PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 393 ei~v~g--~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
||++++ |+++.| ||++++.+...+ |-..+|||+|||+++
T Consensus 482 el~v~~~~p~~~~g--y~~~~~~~~~~~-~~~~~g~~~TGD~~~ 522 (666)
T PLN02654 482 YLCVKKSWPGAFRT--LYGDHERYETTY-FKPFAGYYFSGDGCS 522 (666)
T ss_pred EEEEcCCCchhhhh--hcCChHHHHHhh-hhcCCCEEEeCceEE
Confidence 999999 789999 999999887654 222367999999863
No 18
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=6.6e-55 Score=435.43 Aligned_cols=393 Identities=25% Similarity=0.292 Sum_probs=308.6
Q ss_pred CCCCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013850 22 PSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIA 101 (435)
Q Consensus 22 ~~~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 101 (435)
|+..+.|+.++|.+.++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++||+|+|+++|++++++++|||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~ 79 (563)
T PLN02860 2 ANHSQAHICQCLTRLATLRGNAVVTISG--NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVAC 79 (563)
T ss_pred cchhhhHHHHHHHHHHHhcCCceEEecC--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhh
Confidence 4455589999999999999999999876 47999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhc-----C-CCcEEeccCCcccccccccccccccchhhhh
Q 013850 102 IGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL-----N-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLI 175 (435)
Q Consensus 102 ~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (435)
+|++++|+++.++.+++..+++.+++++++++++........ . ....++..+... .. ..........+++.
T Consensus 80 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--~~~~~~~~~~~~~~ 156 (563)
T PLN02860 80 AGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSS-SV--FIFLNSFLTTEMLK 156 (563)
T ss_pred ccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCccc-cc--ccchhhccccchhc
Confidence 999999999999999999999999999999987653322221 1 111121111000 00 00000111111111
Q ss_pred hhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHH
Q 013850 176 ELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILY 255 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~ 255 (435)
..... .........++++++|+|||||||.||+|.++|+++..+.........+. .+|+++...|++|.+++. .++
T Consensus 157 ~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~--~~d~~l~~~pl~h~~g~~-~~~ 232 (563)
T PLN02860 157 QRALG-TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYG--EDDVYLHTAPLCHIGGLS-SAL 232 (563)
T ss_pred cCccc-cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCC--CCCEEEEecCchhhccHH-HHH
Confidence 11000 11112234678999999999999999999999999987655544333332 339999999999999985 788
Q ss_pred hhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhccccc--CCCCcceeEEEecCCCCcHHHHHHHHhhC
Q 013850 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR--KFDISSLKLVGSGAAPLGKELMEDCQKNI 333 (435)
Q Consensus 256 ~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~i~~gG~~l~~~~~~~~~~~~ 333 (435)
.++..|+++++.+.+++..+++.++++++|++.++|+++..|++..... ...+++||.+++||+++++++.++|++.|
T Consensus 233 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~ 312 (563)
T PLN02860 233 AMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLF 312 (563)
T ss_pred HHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998765332 34678999999999999999999999999
Q ss_pred CCCeeecCcCcccccccccccCCCCC---------------------CcCCCCcccccCCcEEEEEeCCCCccCCCCCce
Q 013850 334 PGATIFQGYGMTETCAPISLENPLVG---------------------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLG 392 (435)
Q Consensus 334 ~~~~~~~~yG~tE~~~~~~~~~~~~~---------------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~G 392 (435)
++.++++.||+||+++.+......+. .....++|+|+++++++|++++ +|+.|
T Consensus 313 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~G 386 (563)
T PLN02860 313 PNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVG 386 (563)
T ss_pred CCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCcee
Confidence 87999999999998865543221110 1112378999999999999853 68899
Q ss_pred eEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 393 EIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 393 ei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
||+++|++++.| ||++++.+.+.+ ..+|||+|||+++
T Consensus 387 el~v~g~~~~~G--Y~~~~~~t~~~~---~~~g~~~TGDl~~ 423 (563)
T PLN02860 387 RILTRGPHVMLG--YWGQNSETASVL---SNDGWLDTGDIGW 423 (563)
T ss_pred EEEEecCccccc--ccCCccccchhc---cCCCeEEccceEE
Confidence 999999999999 999999998866 3578999999764
No 19
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-54 Score=432.91 Aligned_cols=382 Identities=21% Similarity=0.257 Sum_probs=315.0
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.++|.++++++|+++|+++. ++.+||+||.+.++++|+.|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~ 126 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE--RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARI 126 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEE
Confidence 37999999999999999999987 4799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC---CcEEeccCCcccccccccccccccchhhhhhhcCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL---PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (435)
+|+++.++.+++..+++.++++++|++++..+.+..... ....+....... ......+..++++..... .
T Consensus 127 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~- 199 (549)
T PRK07788 127 ILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDD----EPSGSTDETLDDLIAGSS--T- 199 (549)
T ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCcc----ccCCcCcccHHHHhcCCC--C-
Confidence 999999999999999999999999999887776654321 111111100000 011134456666654322 1
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcE
Q 013850 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (435)
Q Consensus 184 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~ 263 (435)
.+....+++.++++|||||||.||+|.++|+++............+. .+++++...|++|.+|+. .++.++..|++
T Consensus 200 -~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~--~~d~~~~~~p~~~~~g~~-~~~~~l~~G~~ 275 (549)
T PRK07788 200 -APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFR--AGETTLLPAPMFHATGWA-HLTLAMALGST 275 (549)
T ss_pred -CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCC--cCCeEEEccchHHHHHHH-HHHHHHHhCCE
Confidence 11223456789999999999999999999999988766655444443 338999999999999995 67788999999
Q ss_pred EEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc--cCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecC
Q 013850 264 VVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 341 (435)
Q Consensus 264 i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~ 341 (435)
+++...+++..+++.++++++|++.++|+++..|++.... ...++++||.+++||+++++++.+++++.++ .++++.
T Consensus 276 ~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~l~~~ 354 (549)
T PRK07788 276 VVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFG-PVLYNL 354 (549)
T ss_pred EEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhC-ccceec
Confidence 9999889999999999999999999999999999987654 4557889999999999999999999999997 899999
Q ss_pred cCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccccc
Q 013850 342 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 421 (435)
Q Consensus 342 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~ 421 (435)
||+||++...... ..+....++++|+|+++++++|+| +++++++.|+.|||+++|+.++.| |+++++. ..
T Consensus 355 YG~TE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~g--Y~~~~~~--~~---- 424 (549)
T PRK07788 355 YGSTEVAFATIAT-PEDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEG--YTDGRDK--QI---- 424 (549)
T ss_pred cCcchhchhhccC-hhhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCcccc--ccCCCcc--cc----
Confidence 9999987654432 222234568999999999999999 589999999999999999999999 9998876 21
Q ss_pred ccCcceecCCCC
Q 013850 422 HTDSFIRGKDQQ 433 (435)
Q Consensus 422 ~~~~~~~tgD~~ 433 (435)
.+|||+|||++
T Consensus 425 -~~g~~~TGDl~ 435 (549)
T PRK07788 425 -IDGLLSSGDVG 435 (549)
T ss_pred -cCCceecCceE
Confidence 26788888876
No 20
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.2e-54 Score=437.25 Aligned_cols=386 Identities=22% Similarity=0.296 Sum_probs=303.5
Q ss_pred CchHHHHHhhcccCCCceeeeecC-C--CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcC
Q 013850 27 FSMVHFLFRNSASYSSKLALIDAD-S--DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~-~--~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 103 (435)
.|+.++|.++++++|+++|+++.+ . .+.+||+||.++++++|+.|.+.|+++||+|+++++|+++|++++|||+++|
T Consensus 39 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G 118 (614)
T PRK08180 39 RRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAG 118 (614)
T ss_pred ccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcC
Confidence 579999999999999999998652 1 2689999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCC-----HHHHHHHHHhcCCeEEEEccc--cHHHHhhcCC-CcEEeccCCcccccccccccccccchhhhh
Q 013850 104 AIASTANPVYT-----VSELSKQVKDSNPKLVITVPE--LWDKVKDLNL-PAVLLGSKDKVSSSGLISRSSKIVSFHDLI 175 (435)
Q Consensus 104 ~~~v~i~~~~~-----~~~~~~~l~~~~~~~vi~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (435)
++++|+++.++ .+++.++++.++++++|+++. ....+..... ...++..+.. ........++++.
T Consensus 119 av~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~ 191 (614)
T PRK08180 119 VPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGA-------VPGRAATPFAALL 191 (614)
T ss_pred CeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCC-------CCCcccccHHHHh
Confidence 99999999998 789999999999999999864 2222222111 1111111100 0011124455555
Q ss_pred hhcCCCC-CCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHH
Q 013850 176 ELSGSVT-DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVIL 254 (435)
Q Consensus 176 ~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~ 254 (435)
....... ........++++++|+|||||||.||+|.+||+++.................++++++.+|++|.+++...+
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~ 271 (614)
T PRK08180 192 ATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNL 271 (614)
T ss_pred ccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHH
Confidence 4322100 111224567999999999999999999999999998887665444443222348999999999999987778
Q ss_pred HhhhhcCcEEEecCC-CC---HHHHHHHHHhcCceEEEecHHHHHHHHhcccc----cCCCCcceeEEEecCCCCcHHHH
Q 013850 255 YDQLQKGNCVVSMGK-FD---IEMALRAIEKYRVTVWWVVPPIILALAKNSLV----RKFDISSLKLVGSGAAPLGKELM 326 (435)
Q Consensus 255 ~~~l~~G~~i~~~~~-~~---~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~~~l~~lr~i~~gG~~l~~~~~ 326 (435)
+.++..|+++++.+. ++ ...+++.++++++|+++++|+++..|++.... ....+++||.+++||+++++++.
T Consensus 272 ~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~ 351 (614)
T PRK08180 272 GIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVW 351 (614)
T ss_pred HHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHH
Confidence 899999999998753 33 35778899999999999999999999875322 23457899999999999999999
Q ss_pred HHHHhh----CC-CCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCc
Q 013850 327 EDCQKN----IP-GATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNV 401 (435)
Q Consensus 327 ~~~~~~----~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~ 401 (435)
+++++. ++ +.++++.||+||++++++..... ..+++++|+|++|++++|+|+ +..|||+++|+++
T Consensus 352 ~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~~v 421 (614)
T PRK08180 352 DRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP--LSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGPNV 421 (614)
T ss_pred HHHHHHHHhhcCCCceeeeeecccccCCceEecccc--cCCCCcccCccCCcEEEEecC--------CCCcEEEEecCcc
Confidence 999875 33 37899999999998766654333 346789999999999999884 3459999999999
Q ss_pred cccccccCCcccccccccccccCcceecCCCCC
Q 013850 402 TPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 402 ~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+.| ||++|+.|.+.| +.+|||+|||+++
T Consensus 422 ~~G--Y~~~p~~t~~~~---~~dgw~~TGDlg~ 449 (614)
T PRK08180 422 TPG--YWRAPELTAEAF---DEEGYYRSGDAVR 449 (614)
T ss_pred chh--hcCChhHhHhhc---ccCCceeccceEE
Confidence 999 999999998876 3578999999874
No 21
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.1e-54 Score=435.04 Aligned_cols=410 Identities=26% Similarity=0.361 Sum_probs=316.1
Q ss_pred cceeecCCCCCCCCCCCCCchHHHHHhhcccCCCceeeeec------CCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEE
Q 013850 9 DGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDA------DSDESLSFSQFKSIVIKVSHSFRHLGITKKDVV 82 (435)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~p~~~a~~~~------~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V 82 (435)
..|..-|..+.+.| .|+.++|.+.++++|+++|+++. +..+.+||+||.+++.++|+.|+++|+++||+|
T Consensus 11 ~~~e~~~~~~~~~~----~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V 86 (632)
T PRK07529 11 EAIEAVPLAARDLP----ASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVV 86 (632)
T ss_pred HHHhcCCchhhcCC----CCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 33443444555666 57999999999999999999863 124789999999999999999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccH-----HHHhh----cC-CCcEEecc
Q 013850 83 LIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKD----LN-LPAVLLGS 152 (435)
Q Consensus 83 ~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~----~~-~~~~~~~~ 152 (435)
+++++|++++++++|||+++| +++|+++.++.+++.++++.++++++|++..+. +.+.. .. .+.++...
T Consensus 87 ~i~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 165 (632)
T PRK07529 87 AFLLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVD 165 (632)
T ss_pred EEECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEec
Confidence 999999999999999999999 569999999999999999999999999986432 22211 11 11222211
Q ss_pred CCccccc--ccc------cccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHH
Q 013850 153 KDKVSSS--GLI------SRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMI 224 (435)
Q Consensus 153 ~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~ 224 (435)
....... ... ........|.+.+...............++++++|+|||||||.||+|.++|+++.......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~ 245 (632)
T PRK07529 166 LARYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLG 245 (632)
T ss_pred CcccccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHH
Confidence 1100000 000 01223445555554433211222334578999999999999999999999999998876554
Q ss_pred HhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCC--C-C---HHHHHHHHHhcCceEEEecHHHHHHHH
Q 013850 225 SAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK--F-D---IEMALRAIEKYRVTVWWVVPPIILALA 298 (435)
Q Consensus 225 ~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~--~-~---~~~~~~~l~~~~~t~~~~~P~~~~~l~ 298 (435)
.....+ ..++++++.+|++|+++....++.++..|+++++.+. + + ...+++.++++++|++.++|+++..|+
T Consensus 246 ~~~~~~--~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 323 (632)
T PRK07529 246 ALLLGL--GPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALL 323 (632)
T ss_pred HHhcCC--CCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHH
Confidence 443333 3349999999999999998788999999999999853 2 1 367899999999999999999999998
Q ss_pred hcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEE
Q 013850 299 KNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIV 378 (435)
Q Consensus 299 ~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~ 378 (435)
+... ...++++||.+++||+++++++.+++++.++ +++++.||+||++.++...... ...+.+++|.|+|+++++|+
T Consensus 324 ~~~~-~~~~~~slr~v~~gg~~l~~~l~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~-~~~~~~svG~~~p~~~v~i~ 400 (632)
T PRK07529 324 QVPV-DGHDISSLRYALCGAAPLPVEVFRRFEAATG-VRIVEGYGLTEATCVSSVNPPD-GERRIGSVGLRLPYQRVRVV 400 (632)
T ss_pred hCcc-cCCCccceEEEEEcCCCCCHHHHHHHHHHhC-CcEeeeecccccCcccccCCcc-ccccCCCcccccCCceEEEE
Confidence 8653 2347889999999999999999999999996 9999999999988776654333 23467899999999999985
Q ss_pred eC-CCC---ccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 379 SV-DTL---KPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 379 d~-~~~---~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+. +++ +++++|+.|||+++|++++.| |+++++ +...+ ..++||+|||+++
T Consensus 401 ~~d~~g~~~~~~~~g~~Gel~v~gp~v~~G--Y~~~~~-~~~~~---~~~gw~~TGDlg~ 454 (632)
T PRK07529 401 ILDDAGRYLRDCAVDEVGVLCIAGPNVFSG--YLEAAH-NKGLW---LEDGWLNTGDLGR 454 (632)
T ss_pred EcCCCCcccccCCCCCceEEEEECCCcccc--ccCCcc-ccccc---cCCCceEcCcEEE
Confidence 32 355 789999999999999999999 998654 44433 2478999999864
No 22
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.4e-54 Score=426.61 Aligned_cols=397 Identities=28% Similarity=0.425 Sum_probs=327.1
Q ss_pred CCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 26 ~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
+.|+.+.|.+.++++|+++|++..+ +.+||.||.+++.++|+.|.+. |+++||+|+++++|+++++++++||+++|+
T Consensus 9 ~~tl~~~l~~~a~~~~~~~a~~~~~--~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 86 (546)
T PRK08314 9 ETSLFHNLEVSARRYPDKTAIVFYG--RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANA 86 (546)
T ss_pred CCCHHHHHHHHHHHcCCCcceeecC--ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCc
Confidence 3689999999999999999999874 7999999999999999999998 999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CCcEEeccCCcc-ccc---cc-----------cccc
Q 013850 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKV-SSS---GL-----------ISRS 165 (435)
Q Consensus 105 ~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~---~~-----------~~~~ 165 (435)
+++|+++.++.+++..+++.++++++++++.....+.... ...+++...... ... .. .-..
T Consensus 87 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (546)
T PRK08314 87 VVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAP 166 (546)
T ss_pred EEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccccccc
Confidence 9999999999999999999999999999988766655432 122222110000 000 00 0001
Q ss_pred ccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHH
Q 013850 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMF 245 (435)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~ 245 (435)
.++..+++...... ........++++++|+|||||||.||+|.++|++++..+........+ ...|++++.+|++
T Consensus 167 ~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~ 241 (546)
T PRK08314 167 GGVVAWKEALAAGL---APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNS--TPESVVLAVLPLF 241 (546)
T ss_pred cccccHHHHhcccC---CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCC--CCCceEEEEcCch
Confidence 12334444443221 122344578899999999999999999999999999887765544444 3349999999999
Q ss_pred HHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHH
Q 013850 246 HVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKEL 325 (435)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~ 325 (435)
|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..++........+++++|.+++||+++++++
T Consensus 242 ~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~ 321 (546)
T PRK08314 242 HVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEAV 321 (546)
T ss_pred HHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHHH
Confidence 99999878899999999999999999999999999999999999999999998876666667889999999999999999
Q ss_pred HHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccc
Q 013850 326 MEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGI 405 (435)
Q Consensus 326 ~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~ 405 (435)
.+++.+.++ .++++.||+||++......... ..+.+++|.|+++++++|+|+++++.++.|+.|||+++|++++.|
T Consensus 322 ~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~g- 397 (546)
T PRK08314 322 AERLKELTG-LDYVEGYGLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVFKG- 397 (546)
T ss_pred HHHHHHHcC-CcEEecccccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchhcc-
Confidence 999999996 9999999999998766544333 345678999999999999998889999999999999999999999
Q ss_pred cccCCcccccccccccccCcceecCCCCC
Q 013850 406 VYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 406 ~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
|+++++.+++.|--++.++||+|||+++
T Consensus 398 -Y~~~~~~t~~~f~~~~~~~~~~TGDl~~ 425 (546)
T PRK08314 398 -YWNRPEATAEAFIEIDGKRFFRTGDLGR 425 (546)
T ss_pred -ccCChhHhhhhhhhcCCCceEecCCEEE
Confidence 9999999888762222346999999863
No 23
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-54 Score=439.28 Aligned_cols=393 Identities=19% Similarity=0.251 Sum_probs=303.7
Q ss_pred CchHHHHHhhcccCCCceeeeecC-------------------------CCcceeHHHHHHHHHHHHHHHHhCCCCCCCE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDAD-------------------------SDESLSFSQFKSIVIKVSHSFRHLGITKKDV 81 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~-------------------------~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~ 81 (435)
.|+.++|.++++++|+++|+.... ..+++||+||.++++++|+.|+++|+++||+
T Consensus 69 ~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~ 148 (700)
T PTZ00216 69 PNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSN 148 (700)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 689999999999999999998731 2378999999999999999999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCcc
Q 013850 82 VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKV 156 (435)
Q Consensus 82 V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~ 156 (435)
|+|+++|+++|++++|||+++|++++|+++.++.+++.++++.++++++|++......+.... ....++..+...
T Consensus 149 V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~~ 228 (700)
T PTZ00216 149 VAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSLP 228 (700)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCCc
Confidence 999999999999999999999999999999999999999999999999999977655443211 111222222110
Q ss_pred cccccccccccccchhhhhhhcC--CCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh--cc
Q 013850 157 SSSGLISRSSKIVSFHDLIELSG--SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL--VG 232 (435)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~--~~ 232 (435)
.. .........+|++++.... ...........++++++|+|||||||.||||++||+++.+.+......... ..
T Consensus 229 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~ 306 (700)
T PTZ00216 229 AS--VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGP 306 (700)
T ss_pred cc--cccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCC
Confidence 00 0011223456777765542 111112234578999999999999999999999999999886655433211 11
Q ss_pred -CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHH-------HHHhcCceEEEecHHHHHHHHhcccc-
Q 013850 233 -ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALR-------AIEKYRVTVWWVVPPIILALAKNSLV- 303 (435)
Q Consensus 233 -~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~-------~l~~~~~t~~~~~P~~~~~l~~~~~~- 303 (435)
..+|++++.+|++|+++.. .....+..|+++++. ++..+++ .++++++|++.++|.+++.+.+....
T Consensus 307 ~~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~ 382 (700)
T PTZ00216 307 PEEDETYCSYLPLAHIMEFG-VTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAK 382 (700)
T ss_pred CCCCCEEEEEChHHHHHHHH-HHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHH
Confidence 2349999999999999985 455667888888774 3455554 68899999999999999887653110
Q ss_pred ------------------------cCC----------------CCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcC
Q 013850 304 ------------------------RKF----------------DISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYG 343 (435)
Q Consensus 304 ------------------------~~~----------------~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG 343 (435)
.+. ..+++|.+++||+++++++.++++..++ +++++||
T Consensus 383 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~--~l~~~YG 460 (700)
T PTZ00216 383 LPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG--MVIQGWG 460 (700)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh--hHhhccC
Confidence 000 0158999999999999999988877664 9999999
Q ss_pred cccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCC-CccCCCCCceeEEEeCCCccccccccCCcccccccccccc
Q 013850 344 MTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDT-LKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEH 422 (435)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~-~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~ 422 (435)
+||+++..+..... ....+++|+|++|++++|+|.+. .....+++.|||+|+|++++.| ||++|+.|.+.| +
T Consensus 461 ~TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~G--Y~~~pe~T~~~f---~ 533 (700)
T PTZ00216 461 LTETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKG--YYKQEELTREVL---D 533 (700)
T ss_pred cccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccch--hcCChhHhhhhc---c
Confidence 99998766654433 45678999999999999999543 2334567789999999999999 999999999987 3
Q ss_pred cCcceecCCCCC
Q 013850 423 TDSFIRGKDQQT 434 (435)
Q Consensus 423 ~~~~~~tgD~~~ 434 (435)
.+|||+|||+++
T Consensus 534 ~dGw~~TGDig~ 545 (700)
T PTZ00216 534 EDGWFHTGDVGS 545 (700)
T ss_pred ccCCeeccceEE
Confidence 578999999874
No 24
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.8e-54 Score=433.32 Aligned_cols=416 Identities=20% Similarity=0.225 Sum_probs=310.4
Q ss_pred ccceeecCCCCCCCCC--CCCCchHHHHHhhcccCCCceeeeecC-----CC--cceeHHHHHHHHHHHHHHHHhCCCCC
Q 013850 8 RDGIYRSLRPPLVLPS--DPSFSMVHFLFRNSASYSSKLALIDAD-----SD--ESLSFSQFKSIVIKVSHSFRHLGITK 78 (435)
Q Consensus 8 ~~~~~~~~~~~~~~~~--~~~~tl~~~l~~~~~~~p~~~a~~~~~-----~~--~~~Ty~el~~~~~~la~~L~~~g~~~ 78 (435)
+..++++...+..++. ....|+.++|.+.++++|+++|+.... .+ .++||+|+.++++++|+.|.+.|+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~ 100 (660)
T PLN02430 21 VGPVYRNLLSKKGFPPIDSDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEP 100 (660)
T ss_pred CCCccccccccccccCCCCCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCC
Confidence 4456665443222211 122789999999999999999996421 11 35799999999999999999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH-HHhhcC-----CCcEEecc
Q 013850 79 KDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD-KVKDLN-----LPAVLLGS 152 (435)
Q Consensus 79 gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~-~~~~~~-----~~~~~~~~ 152 (435)
||+|+|+++|++||++++|||+++|++++|+++.++.+++.++++.++++++|+++.... .+.... .+.++...
T Consensus 101 gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~ 180 (660)
T PLN02430 101 GSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFT 180 (660)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999875432 222211 12222222
Q ss_pred CCcccc-cccccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh-
Q 013850 153 KDKVSS-SGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL- 230 (435)
Q Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~- 230 (435)
+..... ...........+|++++..... .........++++++|+|||||||.||||++||+++...+.........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~ 259 (660)
T PLN02430 181 SVTEEESDKASQIGVKTYSWIDFLHMGKE-NPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQF 259 (660)
T ss_pred CCChHHhhhhhcCCcEEEEHHHHHHhhcc-CCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhcccc
Confidence 110000 0000011123466666654431 1112233468999999999999999999999999998876554322111
Q ss_pred --ccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc-----
Q 013850 231 --VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV----- 303 (435)
Q Consensus 231 --~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----- 303 (435)
....+|++++.+|++|.++.. ..+.++..|+++++... ++..+++.|.++++|++.++|.+++.+.+....
T Consensus 260 ~~~~~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~ 337 (660)
T PLN02430 260 EDKMTHDDVYLSFLPLAHILDRM-IEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQEL 337 (660)
T ss_pred ccCCCCCCEEEEeCcHHHHHHHH-HHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhcc
Confidence 122349999999999999986 45567889999987653 788899999999999999999999887652100
Q ss_pred --------------------------cCCC-------------C-cceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcC
Q 013850 304 --------------------------RKFD-------------I-SSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYG 343 (435)
Q Consensus 304 --------------------------~~~~-------------l-~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG 343 (435)
.... + ++||.+++||+++++++.+.++ .+++..++++||
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG 416 (660)
T PLN02430 338 NPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYG 416 (660)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecc
Confidence 0000 1 5899999999999999876655 444478999999
Q ss_pred cccccccccccCCCCCCcCCCCcccccCCcEEEEEe-CCCC-ccCCCCCceeEEEeCCCccccccccCCccccccccccc
Q 013850 344 MTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVS-VDTL-KPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 421 (435)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~-~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~ 421 (435)
+||+++.++...+.+ ....+++|.|.+++++++.| ++.+ .+++.+..|||+|+||+++.| ||++|+.|.+.|
T Consensus 417 ~TE~~~~~~~~~~~~-~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~G--Y~~~~e~t~~~~--- 490 (660)
T PLN02430 417 LTETLGPTTLGFPDE-MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSG--YYKNPELTEEVM--- 490 (660)
T ss_pred hhhhhhceEeecccc-CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCcccc--ccCChHHhhhhh---
Confidence 999988776654432 34578999999999999987 3444 556667789999999999999 999999999887
Q ss_pred ccCcceecCCCCC
Q 013850 422 HTDSFIRGKDQQT 434 (435)
Q Consensus 422 ~~~~~~~tgD~~~ 434 (435)
.+|||+|||+++
T Consensus 491 -~dGw~~TGDig~ 502 (660)
T PLN02430 491 -KDGWFHTGDIGE 502 (660)
T ss_pred -hccceeccceEE
Confidence 478999999864
No 25
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.2e-53 Score=423.47 Aligned_cols=385 Identities=25% Similarity=0.307 Sum_probs=315.9
Q ss_pred CchHHHHHhhcccCCCceeeeecCCC----cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHc
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~----~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~ 102 (435)
.|+.+.|.+.++.+|+++|+++.+.+ +.+||.||.++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 24 ~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~ 103 (547)
T PRK13295 24 RTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRI 103 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 68999999999999999999875422 78999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccH-----HHHhhc----C-CCcEEeccCCcccccccccccccccchh
Q 013850 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIVSFH 172 (435)
Q Consensus 103 G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (435)
|++++|++|.++.+++..+++.++++++++++... +.+... . ...++..... ...++.
T Consensus 104 G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 171 (547)
T PRK13295 104 GAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGD------------GADSFE 171 (547)
T ss_pred CcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCC------------CccCHH
Confidence 99999999999999999999999999999987541 111111 1 1122221110 112333
Q ss_pred hhhhhcC------CCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHH
Q 013850 173 DLIELSG------SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFH 246 (435)
Q Consensus 173 ~~~~~~~------~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~ 246 (435)
++..... ...........++++++|+|||||||.||+|.++|+++...+........+.. ++++++..|++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~~~~l~~~p~~h 249 (547)
T PRK13295 172 ALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGA--DDVILMASPMAH 249 (547)
T ss_pred HHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCC--CCeEEEecCchh
Confidence 3332110 00111123356789999999999999999999999999887766554444433 499999999999
Q ss_pred HHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHH
Q 013850 247 VFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELM 326 (435)
Q Consensus 247 ~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~ 326 (435)
.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+........+++||.+++||+++++++.
T Consensus 250 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~ 329 (547)
T PRK13295 250 QTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALV 329 (547)
T ss_pred hhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHH
Confidence 99987789999999999999998999999999999999999999999999998776666788999999999999999999
Q ss_pred HHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCcccccc
Q 013850 327 EDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIV 406 (435)
Q Consensus 327 ~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~ 406 (435)
+++.+.++ +++++.||+||++.+..............++|+|+++++++|+| +++++++.|+.|||+++|++++.|
T Consensus 330 ~~~~~~~~-~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~g-- 405 (547)
T PRK13295 330 ERARAALG-AKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGG-- 405 (547)
T ss_pred HHHHHHhC-CCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCccccc--
Confidence 99999995 99999999999887654433221123356889999999999999 578999999999999999999999
Q ss_pred ccCCcccccccccccccCcceecCCCCC
Q 013850 407 YINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 407 y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
|+++++.+.... +|||+|||+++
T Consensus 406 Y~~~~~~t~~~~-----~g~~~TGD~~~ 428 (547)
T PRK13295 406 YLKRPQLNGTDA-----DGWFDTGDLAR 428 (547)
T ss_pred ccCCccccccCC-----CCCeecceEEE
Confidence 999999887753 66999999764
No 26
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.6e-53 Score=430.62 Aligned_cols=397 Identities=23% Similarity=0.290 Sum_probs=309.8
Q ss_pred CchHH-HHHhhcccCCCceeeeecCC----CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013850 27 FSMVH-FLFRNSASYSSKLALIDADS----DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIA 101 (435)
Q Consensus 27 ~tl~~-~l~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 101 (435)
.|+.. .|.++++.+|+++|++.... .+.+||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 56 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 135 (625)
T TIGR02188 56 LNVSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACAR 135 (625)
T ss_pred EEHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 44444 45567788999999986432 26899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH---------HH----hhcC--CCcEEeccCCcccccccccccc
Q 013850 102 IGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD---------KV----KDLN--LPAVLLGSKDKVSSSGLISRSS 166 (435)
Q Consensus 102 ~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~ 166 (435)
+|++++|+++.++.+++..+++.++++++|+++.... .+ .... .+.+++...... ... ....
T Consensus 136 ~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~ 212 (625)
T TIGR02188 136 IGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGN-PVP--WVEG 212 (625)
T ss_pred hCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCC-CcC--cccc
Confidence 9999999999999999999999999999999875321 11 1111 121222211000 000 0011
Q ss_pred cccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHh-hhhhccCCCcEEEecchHH
Q 013850 167 KIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPMF 245 (435)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~d~~l~~~~l~ 245 (435)
....+++++.... ....+....++++++|+|||||||.||+|+++|+++......... ...+ ..+|++++..|++
T Consensus 213 ~~~~~~~~~~~~~--~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~ 288 (625)
T TIGR02188 213 RDVWWHDLMAKAS--AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDI--KDGDIFWCTADVG 288 (625)
T ss_pred ccccHHHHHhhcC--CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCC--CCCcEEEECCCch
Confidence 1233555544322 223344567899999999999999999999999998755432221 1222 3349999999999
Q ss_pred HHHHHHHHHHhhhhcCcEEEecCC----CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc--cCCCCcceeEEEecCC
Q 013850 246 HVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAA 319 (435)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~i~~gG~ 319 (435)
|+++....++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|.+.... ...++++||.++++|+
T Consensus 289 ~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~ 368 (625)
T TIGR02188 289 WITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGE 368 (625)
T ss_pred hhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 999886678999999999998753 4799999999999999999999999999886532 3356889999999999
Q ss_pred CCcHHHHHHHHhhCC--CCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCC-CCCceeEEE
Q 013850 320 PLGKELMEDCQKNIP--GATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLP-PNQLGEIWV 396 (435)
Q Consensus 320 ~l~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~-~g~~Gei~v 396 (435)
++++++.+++.+.++ ++++++.||+||+++.+....+.....+++++|+|++|++++|+| ++|++++ +|+.|||++
T Consensus 369 ~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~GeL~v 447 (625)
T TIGR02188 369 PINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGYLVI 447 (625)
T ss_pred CCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEEEEE
Confidence 999999999999886 378999999999987765443322245678999999999999999 7899999 999999999
Q ss_pred eC--CCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 397 RG--PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 397 ~g--~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+| |+++.| ||++++.+.+.+ +-..+|||+|||+++
T Consensus 448 ~~p~p~~~~g--y~~~~~~~~~~~-~~~~~g~~~TGDl~~ 484 (625)
T TIGR02188 448 KQPWPGMLRT--IYGDHERFVDTY-FSPFPGYYFTGDGAR 484 (625)
T ss_pred ccCCCccccc--ccCChHHHHHHH-hccCCCEEECCceEE
Confidence 99 689999 999998776644 222367999999864
No 27
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.4e-54 Score=431.62 Aligned_cols=399 Identities=22% Similarity=0.214 Sum_probs=300.3
Q ss_pred CchHHHH-Hhhccc--CCCceeeeecCC----CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013850 27 FSMVHFL-FRNSAS--YSSKLALIDADS----DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (435)
Q Consensus 27 ~tl~~~l-~~~~~~--~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 99 (435)
.|....+ .++++. +|+++|++.... .+.+||+||.++++++|+.|+++|+++||+|+++++|++++++++|||
T Consensus 58 ~n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~ 137 (647)
T PTZ00237 58 LNTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSC 137 (647)
T ss_pred eeHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 5555544 455543 799999986421 268999999999999999999999999999999999999999999999
Q ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccc---------cHHHHhhc---C---CCcEEeccCCc---ccccc-
Q 013850 100 IAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE---------LWDKVKDL---N---LPAVLLGSKDK---VSSSG- 160 (435)
Q Consensus 100 ~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~---------~~~~~~~~---~---~~~~~~~~~~~---~~~~~- 160 (435)
+++|++++|+++.++.+++..++++++++++|+++. ..+.+.+. . ...+++..... .....
T Consensus 138 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 217 (647)
T PTZ00237 138 ARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKK 217 (647)
T ss_pred HHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccccccc
Confidence 999999999999999999999999999999999752 12222111 1 11222211100 00000
Q ss_pred --cccccccccchhhhhhhcC---CCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCC
Q 013850 161 --LISRSSKIVSFHDLIELSG---SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD 235 (435)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~ 235 (435)
..........|++++.... ...........++++++|+|||||||.||||+++|.+.+........ .......+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~-~~~~~~~~ 296 (647)
T PTZ00237 218 IETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWR-SIIEKDIP 296 (647)
T ss_pred ccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHH-HhcCCCCC
Confidence 0000112234555543211 00112234567899999999999999999999999984433222111 11222234
Q ss_pred cEEEecchHHHHHHHHHHHHhhhhcCcEEEecCC--CC----HHHHHHHHHhcCceEEEecHHHHHHHHhccc-----cc
Q 013850 236 HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK--FD----IEMALRAIEKYRVTVWWVVPPIILALAKNSL-----VR 304 (435)
Q Consensus 236 d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~--~~----~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~-----~~ 304 (435)
+++++..|++|+.+. ..++.+|..|+++++.+. +. +..+++.++++++|++.++|++++.|.+... ..
T Consensus 297 d~~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 375 (647)
T PTZ00237 297 TVVFSHSSIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRS 375 (647)
T ss_pred cEEEEcCCCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcccccccc
Confidence 899999999998765 368899999999998753 12 6889999999999999999999999987532 23
Q ss_pred CCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCc
Q 013850 305 KFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLK 384 (435)
Q Consensus 305 ~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~ 384 (435)
..++++||.+++||+++++++.+++++.++ +++++.||+||+++.+...... .....+++|+|++|++++|+| ++|+
T Consensus 376 ~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g-~~i~~~yG~TE~~~~~~~~~~~-~~~~~~s~G~p~~g~~~~i~d-~~g~ 452 (647)
T PTZ00237 376 KYDLSNLKEIWCGGEVIEESIPEYIENKLK-IKSSRGYGQTEIGITYLYCYGH-INIPYNATGVPSIFIKPSILS-EDGK 452 (647)
T ss_pred ccCcchheEEEecCccCCHHHHHHHHHhcC-CCEEeeechHHhChhhhccCCC-CCCCCCCCccCcCCceEEEEC-CCCC
Confidence 457899999999999999999999999997 9999999999998665543332 123458999999999999999 5899
Q ss_pred cCCCCCceeEEEeCC---CccccccccCCcccccccccccccCcceecCCCCC
Q 013850 385 PLPPNQLGEIWVRGP---NVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 385 ~~~~g~~Gei~v~g~---~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+++.|+.|||++++| +++.| ||++++.+.+.| ...+|||+|||+++
T Consensus 453 ~~~~ge~GEl~v~~p~~p~~~~g--y~~~~~~~~~~f--~~~~g~~~TGDlg~ 501 (647)
T PTZ00237 453 ELNVNEIGEVAFKLPMPPSFATT--FYKNDEKFKQLF--SKFPGYYNSGDLGF 501 (647)
T ss_pred CCCCCCceEEEEeccCCchhhCc--eeCCHHHHHHHH--hCCCCEEECCcEEE
Confidence 999999999999986 78999 999999887644 12267999999873
No 28
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-53 Score=430.16 Aligned_cols=384 Identities=23% Similarity=0.295 Sum_probs=298.6
Q ss_pred CchHHHHHhhcccCCCceeeeecCC--C--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHc
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADS--D--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~--~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~ 102 (435)
.|+.+.|.++++++|+++|+++.+. + +.+||+||.++++++|++|++.|+++||+|+++++|+++|++++|||+++
T Consensus 49 ~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~ 128 (624)
T PRK12582 49 RSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQA 128 (624)
T ss_pred cCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 6899999999999999999987531 2 68999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCH-----HHHHHHHHhcCCeEEEEcccc--HHHHhhc---CCCcEEeccCCcccccccccccccccchh
Q 013850 103 GAIASTANPVYTV-----SELSKQVKDSNPKLVITVPEL--WDKVKDL---NLPAVLLGSKDKVSSSGLISRSSKIVSFH 172 (435)
Q Consensus 103 G~~~v~i~~~~~~-----~~~~~~l~~~~~~~vi~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (435)
|++++|++|.++. +++.++++.++++++|+++.. ...+... ..+.+.+... ........+.
T Consensus 129 G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~~~~~~~~ 199 (624)
T PRK12582 129 GVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGP---------GEGIASIAFA 199 (624)
T ss_pred CCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCC---------CcccccccHH
Confidence 9999999999874 899999999999999998642 1111111 1122222111 0111223455
Q ss_pred hhhhhcCCC-CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHH
Q 013850 173 DLIELSGSV-TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGL 250 (435)
Q Consensus 173 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~ 250 (435)
++....... .........++++++|+|||||||.||+|.+||+++................ ..+++++.+|++|.+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~ 279 (624)
T PRK12582 200 DLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGG 279 (624)
T ss_pred HHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhH
Confidence 544322210 0011233567899999999999999999999999998876554332222211 13799999999999998
Q ss_pred HHHHHhhhhcCcEEEecCC-CC---HHHHHHHHHhcCceEEEecHHHHHHHHhccccc----CCCCcceeEEEecCCCCc
Q 013850 251 SVILYDQLQKGNCVVSMGK-FD---IEMALRAIEKYRVTVWWVVPPIILALAKNSLVR----KFDISSLKLVGSGAAPLG 322 (435)
Q Consensus 251 ~~~~~~~l~~G~~i~~~~~-~~---~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~----~~~l~~lr~i~~gG~~l~ 322 (435)
...++.++..|+++++.+. ++ ...+++.++++++|++.++|+++..|.+..... ...+++||.+++||++++
T Consensus 280 ~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~ 359 (624)
T PRK12582 280 NANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLS 359 (624)
T ss_pred HHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCC
Confidence 7677889999999998753 33 345677888999999999999999887653222 234689999999999999
Q ss_pred HHHHHHHHhhC----C-CCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEe
Q 013850 323 KELMEDCQKNI----P-GATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVR 397 (435)
Q Consensus 323 ~~~~~~~~~~~----~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~ 397 (435)
+++.+++++.+ + ++++++.||+||++.++...... ..+.+++|+|++|++++|++ .|+.|||+++
T Consensus 360 ~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~~--------~G~~GEl~vr 429 (624)
T PRK12582 360 DDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD--TERVGLIGLPLPGVELKLAP--------VGDKYEVRVK 429 (624)
T ss_pred HHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC--CCCCCCCCcCCCCcEEEEcc--------CCCceEEEEE
Confidence 99999998863 3 36899999999998766533332 35678999999999999964 3778999999
Q ss_pred CCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 398 GPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 398 g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
|++++.| ||++|+.|.+.| +.+|||+|||+++
T Consensus 430 g~~v~~G--Y~~~p~~t~~~f---~~dgw~~TGDlg~ 461 (624)
T PRK12582 430 GPNVTPG--YHKDPELTAAAF---DEEGFYRLGDAAR 461 (624)
T ss_pred CCccccc--ccCCccchhhhc---CccCCccccceEE
Confidence 9999999 999999998877 3578999999874
No 29
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.1e-53 Score=428.04 Aligned_cols=398 Identities=23% Similarity=0.276 Sum_probs=307.2
Q ss_pred CchH-HHHHhhcccCCCceeeeecC----CCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013850 27 FSMV-HFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIA 101 (435)
Q Consensus 27 ~tl~-~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 101 (435)
.|+. ++|.++++.+|+++|+++.+ ..+.+||+||.++++++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 51 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~ 130 (628)
T TIGR02316 51 TNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACAR 130 (628)
T ss_pred eeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 5554 56667788899999998632 236899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccH---------HHHhh----c--CCCcEEeccCCcccccccccccc
Q 013850 102 IGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW---------DKVKD----L--NLPAVLLGSKDKVSSSGLISRSS 166 (435)
Q Consensus 102 ~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~ 166 (435)
+|++++|+++.++.+++..+++.++++++|+++... +.+.. . ....+++....... ......
T Consensus 131 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~---~~~~~~ 207 (628)
T TIGR02316 131 IGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAP---MRLIPG 207 (628)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC---cCcccC
Confidence 999999999999999999999999999999986432 11111 1 11222222211000 000011
Q ss_pred cccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHH-HHhhhhhccCCCcEEEecchHH
Q 013850 167 KIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLM-ISAHQELVGELDHVVLCVLPMF 245 (435)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~d~~l~~~~l~ 245 (435)
....+.++...... ...+.....++++++|+|||||||.||||+++|.++...... ......+ ..+|++++..|++
T Consensus 208 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~ 284 (628)
T TIGR02316 208 RDVDYAALRTQHED-AQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGI--RAGQVMFSASDVG 284 (628)
T ss_pred ccccHHHHhhcccc-CCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCC--CCCcEEEEcCCCC
Confidence 12345554432211 112223356899999999999999999999999998644322 2222233 3349999999999
Q ss_pred HHHHHHHHHHhhhhcCcEEEecCC----CCHHHHHHHHHhcCceEEEecHHHHHHHHhccc--ccCCCCcceeEEEecCC
Q 013850 246 HVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAA 319 (435)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~i~~gG~ 319 (435)
|+++....++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|.+... ....++++||.+++||+
T Consensus 285 ~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe 364 (628)
T TIGR02316 285 WVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGE 364 (628)
T ss_pred eeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 999986678999999999999863 478999999999999999999999999987643 23557899999999999
Q ss_pred CCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCC--CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEe
Q 013850 320 PLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV--GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVR 397 (435)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~--~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~ 397 (435)
++++++.+++++.++ ..+++.||+||++..+....... ...+.+++|+|++|++++|+|+++|++++.|+.|||+++
T Consensus 365 ~l~~~~~~~~~~~~~-~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~ 443 (628)
T TIGR02316 365 PLDEPTAHWITDGLG-KPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVV 443 (628)
T ss_pred CCCHHHHHHHHHHhC-CCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEe
Confidence 999999999999986 89999999999885443322211 134568899999999999999668999999999999999
Q ss_pred CC---CccccccccCCcccccccc-cccccCcceecCCCCC
Q 013850 398 GP---NVTPGIVYINFFVFTLFLW-GCEHTDSFIRGKDQQT 434 (435)
Q Consensus 398 g~---~~~~g~~y~~~~~~~~~~~-~~~~~~~~~~tgD~~~ 434 (435)
|| +++.| ||++++.+.+.+ ..+ .++||+|||+++
T Consensus 444 gp~~~g~~~~--~~~~~~~~~~~~~~~~-~~~~~~TGD~g~ 481 (628)
T TIGR02316 444 PPLPPGCLST--VWGDDARFLKTYWSHF-KRPLYSSFDWGI 481 (628)
T ss_pred cCCCcccccc--ccCChHHHHHhhhhcC-CCCEEECCceEE
Confidence 98 57889 999998776644 112 367999999864
No 30
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-53 Score=419.87 Aligned_cols=393 Identities=27% Similarity=0.388 Sum_probs=330.6
Q ss_pred CCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcC
Q 013850 24 DPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (435)
Q Consensus 24 ~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 103 (435)
....|+.++|.+.++++|+++|+.+. +..+||.||.+.+.++|+.|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 8 ~~~~~l~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G 85 (523)
T PRK08316 8 ARRQTIGDILRRSARRYPDKTALVFG--DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAG 85 (523)
T ss_pred ccCCCHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 33478999999999999999999987 4899999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC----CcEEeccCCcccccccccccccccchhhhhhhcC
Q 013850 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 179 (435)
Q Consensus 104 ~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (435)
++++|+++..+.+++..+++.+++++++++++....+..... ..+...... ...........+.++.....
T Consensus 86 ~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 160 (523)
T PRK08316 86 AVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVL-----GGREAPGGWLDFADWAEAGS 160 (523)
T ss_pred cEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecc-----cccccccchhhHHHHHhcCC
Confidence 999999999999999999999999999999887766653321 111110000 00012223445555444332
Q ss_pred CCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhh
Q 013850 180 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (435)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~ 259 (435)
.........++++++++|||||||.||+|.++|+++............+.. ++++++.+|++|.+++...++.++.
T Consensus 161 --~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~p~~h~~g~~~~~~~~~~ 236 (523)
T PRK08316 161 --VAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSA--DDIPLHALPLYHCAQLDVFLGPYLY 236 (523)
T ss_pred --CccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCC--CceEEEccCCchhhhHHHHHHHHHh
Confidence 222345567889999999999999999999999999887666555554433 3999999999999998766777899
Q ss_pred cCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeee
Q 013850 260 KGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIF 339 (435)
Q Consensus 260 ~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~ 339 (435)
.|+++++.+..++..+++.++++++|++.++|+++..|.+.......+++++|.++.||++++.++.+.+++.+++.+++
T Consensus 237 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~ 316 (523)
T PRK08316 237 VGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFY 316 (523)
T ss_pred cCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCcee
Confidence 99999999888999999999999999999999999999988776777889999999999999999999999999779999
Q ss_pred cCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc
Q 013850 340 QGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 419 (435)
Q Consensus 340 ~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~ 419 (435)
+.||+||++.+.......+.....+++|+|+++++++|+| +++.+++.|+.|||+++|+.++.| |+++++.+.+.|
T Consensus 317 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~--y~~~~~~~~~~~- 392 (523)
T PRK08316 317 NCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLG--YWDDPEKTAEAF- 392 (523)
T ss_pred eeecccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhh--hcCCHHHHHHHh-
Confidence 9999999988776654443345568999999999999999 578999999999999999999999 999999998887
Q ss_pred ccccCcceecCCCCC
Q 013850 420 CEHTDSFIRGKDQQT 434 (435)
Q Consensus 420 ~~~~~~~~~tgD~~~ 434 (435)
.++||+|||+++
T Consensus 393 ---~~~~~~TGDl~~ 404 (523)
T PRK08316 393 ---RGGWFHSGDLGV 404 (523)
T ss_pred ---hCCCeeccceEE
Confidence 478999999863
No 31
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-53 Score=423.45 Aligned_cols=388 Identities=27% Similarity=0.388 Sum_probs=315.8
Q ss_pred CchH-HHHHhhcc-cCCCceeeeecC--CCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHc
Q 013850 27 FSMV-HFLFRNSA-SYSSKLALIDAD--SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (435)
Q Consensus 27 ~tl~-~~l~~~~~-~~p~~~a~~~~~--~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~ 102 (435)
.++. +.+.++++ .+|+++|+...+ ..+.+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~ 121 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKN 121 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 5555 46677765 589999998653 2368999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC---CCcEEeccCCcccccccccccccccchhhhhhhcC
Q 013850 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 179 (435)
Q Consensus 103 G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (435)
|++++|+++.++.+++.++++.++++++++++.......... .+.+++..... ........+.+++....
T Consensus 122 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 194 (570)
T PRK04319 122 GAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDV-------EEGPGTLDFNALMEQAS 194 (570)
T ss_pred CcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCc-------CCCcCccCHHHHHhhcC
Confidence 999999999999999999999999999999987654432211 11222211110 11123345555554333
Q ss_pred CCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhh
Q 013850 180 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (435)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~ 259 (435)
.........++++++|+|||||||.||+|.++|+++............+. .+|++++..|++|.+|....++.++.
T Consensus 195 --~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~g~~~~~~~~l~ 270 (570)
T PRK04319 195 --DEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLH--EDDVYWCTADPGWVTGTSYGIFAPWL 270 (570)
T ss_pred --CcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCC--CCceEEecCChHHhhCchHHHHHHHh
Confidence 23333455678999999999999999999999999987765544444433 34999999999999998778899999
Q ss_pred cCcEEEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhccc--ccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCC
Q 013850 260 KGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (435)
Q Consensus 260 ~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 336 (435)
.|+++++.. .+++..+++.++++++|++.++|++++.|.+... ....++++||.+++||+++++++.+++++.++ .
T Consensus 271 ~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~ 349 (570)
T PRK04319 271 NGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVFG-L 349 (570)
T ss_pred cCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHhC-C
Confidence 999998875 6799999999999999999999999999987643 23456889999999999999999999999987 9
Q ss_pred eeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeC--CCccccccccCCcccc
Q 013850 337 TIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG--PNVTPGIVYINFFVFT 414 (435)
Q Consensus 337 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g--~~~~~g~~y~~~~~~~ 414 (435)
++++.||+||+++.+....... ...++++|+|+++++++|+| +++..+++|+.|||+++| ++++.| ||++++.+
T Consensus 350 ~i~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~G--Y~~~~~~~ 425 (570)
T PRK04319 350 PIHDNWWMTETGGIMIANYPAM-DIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRG--IWNNPEKY 425 (570)
T ss_pred CeEeceeecccCCEEEecCCCC-CCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhH--hcCCHHHh
Confidence 9999999999987665443321 34578999999999999999 578888999999999997 899999 99999999
Q ss_pred cccccccccCcceecCCCCC
Q 013850 415 LFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 415 ~~~~~~~~~~~~~~tgD~~~ 434 (435)
.+.| .+|||+|||+++
T Consensus 426 ~~~~----~~gw~~TGDl~~ 441 (570)
T PRK04319 426 ESYF----AGDWYVSGDSAY 441 (570)
T ss_pred hhhh----cCCceEeCcEEE
Confidence 8877 378999999864
No 32
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.4e-53 Score=417.77 Aligned_cols=390 Identities=27% Similarity=0.418 Sum_probs=327.2
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.+.|.+.++.+|+++|+++. ++.+||+||.+.+.++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 5 ~~i~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~ 82 (513)
T PRK07656 5 MTLPELLARAARRFGDKEAYVFG--DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVV 82 (513)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 68999999999999999999987 5899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCcccccccccccccccchhhhhhhcCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (435)
+|+++..+.+++..++++++++++++++.......... .+.+++....... .......+|.++.....
T Consensus 83 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-- 155 (513)
T PRK07656 83 VPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDD-----PHTEKMKTFTDFLAAGD-- 155 (513)
T ss_pred EecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccc-----cCccccccHHHHHhcCC--
Confidence 99999999999999999999999999987665443321 1222222211100 00112245555554332
Q ss_pred CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcC
Q 013850 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (435)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G 261 (435)
.........++++++|+|||||||.||+|.++|.++...+........+.. ++++++.+|++|.+++...++.++..|
T Consensus 156 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~G 233 (513)
T PRK07656 156 PAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTE--GDRYLAANPFFHVFGYKAGVNAPLMRG 233 (513)
T ss_pred CCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCC--CCeEEEccchHHHHHHHHHHHHHHHcC
Confidence 222334567899999999999999999999999999887665544444433 399999999999999987789999999
Q ss_pred cEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCC-eeec
Q 013850 262 NCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA-TIFQ 340 (435)
Q Consensus 262 ~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~-~~~~ 340 (435)
+++++.+.+++..+++.++++++|++.++|+++..|.+........++++|.+++||+++++++.+++.+.++ . .+++
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~-~~~~~~ 312 (513)
T PRK07656 234 ATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELG-VDIVLT 312 (513)
T ss_pred ceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcC-CCceEe
Confidence 9999998889999999999999999999999999999987777778899999999999999999999999997 6 9999
Q ss_pred CcCcccccccccccCCCCC-CcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc
Q 013850 341 GYGMTETCAPISLENPLVG-VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 419 (435)
Q Consensus 341 ~yG~tE~~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~ 419 (435)
.||+||+++++........ ....+++|.|+++++++|+| +++++++.|+.|||+++|+.++.| |++++..+...+
T Consensus 313 ~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~- 388 (513)
T PRK07656 313 GYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKG--YYDDPEATAAAI- 388 (513)
T ss_pred EEccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhh--hcCCHHHHhhhh-
Confidence 9999999887766544321 12267899999999999999 579999999999999999999999 999999887765
Q ss_pred ccccCcceecCCCCC
Q 013850 420 CEHTDSFIRGKDQQT 434 (435)
Q Consensus 420 ~~~~~~~~~tgD~~~ 434 (435)
..++||+|||+++
T Consensus 389 --~~~~~~~tGDl~~ 401 (513)
T PRK07656 389 --DADGWLHTGDLGR 401 (513)
T ss_pred --ccCCceeccceEE
Confidence 3478999999763
No 33
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.9e-53 Score=422.47 Aligned_cols=385 Identities=23% Similarity=0.322 Sum_probs=303.0
Q ss_pred CchHHHHHhhcccCCCceeeeecCCC--------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHH
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSD--------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLG 98 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~--------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA 98 (435)
.|+.++|.+.++++|+++|+++.+.+ +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la 85 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFA 85 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence 68899999999999999999876422 2899999999999999999999999999999999999999999999
Q ss_pred HHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc--ccHHHHhhcC---CCcEEeccCCcccccccccccccccchhh
Q 013850 99 VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP--ELWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKIVSFHD 173 (435)
Q Consensus 99 ~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (435)
|+++|++++|++|.++.+++..+++.++++++|+++ .....+.... ....+.... ........+++
T Consensus 86 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~~~~~~~~~~ 156 (552)
T PRK09274 86 LFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGG---------RLLWGGTTLAT 156 (552)
T ss_pred HHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheecccc---------ccccCCccHHH
Confidence 999999999999999999999999999999999975 2222222111 111111110 00011123343
Q ss_pred hhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHH
Q 013850 174 LIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVI 253 (435)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~ 253 (435)
+...... .........++++++|+|||||||.||+|.++|+++...+........+.. +++.++..|++|++++
T Consensus 157 ~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~pl~~~~~~--- 230 (552)
T PRK09274 157 LLRDGAA-APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEP--GEIDLPTFPLFALFGP--- 230 (552)
T ss_pred hcccCcc-ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCC--CceeeeccCHHHhhhh---
Confidence 3311111 122334556789999999999999999999999999988776555444433 3899999999886544
Q ss_pred HHhhhhcCcEEEecC-------CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHH
Q 013850 254 LYDQLQKGNCVVSMG-------KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELM 326 (435)
Q Consensus 254 ~~~~l~~G~~i~~~~-------~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~ 326 (435)
..|+++++.+ .+++..+++.|+++++|+++++|+++..|.+.......++++||.+++||+++++++.
T Consensus 231 -----~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~ 305 (552)
T PRK09274 231 -----ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVI 305 (552)
T ss_pred -----hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHH
Confidence 3477777653 4689999999999999999999999999998766666789999999999999999999
Q ss_pred HHHHhhCC-CCeeecCcCcccccccccccCCC------C--CCcCCCCcccccCCcEEEEEeCC--------CCccCCCC
Q 013850 327 EDCQKNIP-GATIFQGYGMTETCAPISLENPL------V--GVRRSGSAGTLVAGVEAQIVSVD--------TLKPLPPN 389 (435)
Q Consensus 327 ~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~------~--~~~~~~~~G~~~~~~~~~i~d~~--------~~~~~~~g 389 (435)
+++++.|+ ++++++.||+||+++++...... . ......++|+|+++++++|+|++ ++++++.|
T Consensus 306 ~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g 385 (552)
T PRK09274 306 ERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATG 385 (552)
T ss_pred HHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCC
Confidence 99999997 37999999999988765543211 0 01123478999999999999952 56789999
Q ss_pred CceeEEEeCCCccccccccCCcccccccccccccCc--ceecCCCCC
Q 013850 390 QLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDS--FIRGKDQQT 434 (435)
Q Consensus 390 ~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~--~~~tgD~~~ 434 (435)
+.|||+++|++++.| ||++++.|...+ ..+.+| ||+|||+++
T Consensus 386 ~~Gel~v~g~~~~~G--Y~~~~~~t~~~~-~~~~~g~~w~~TGDlg~ 429 (552)
T PRK09274 386 EIGEIVVAGPMVTRS--YYNRPEATRLAK-IPDGQGDVWHRMGDLGY 429 (552)
T ss_pred CeeEEEEecCccccc--ccCChHHhhhhh-cccCCCCcEEEcCCEEE
Confidence 999999999999999 999999988765 112345 999999864
No 34
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-52 Score=425.37 Aligned_cols=397 Identities=22% Similarity=0.312 Sum_probs=309.6
Q ss_pred CchH-HHHHhhcccCCCceeeeecC----CCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013850 27 FSMV-HFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIA 101 (435)
Q Consensus 27 ~tl~-~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 101 (435)
.|+. +.|.++++++|+++|++..+ ..+.+||+||.++++++|+.|++.|+++||+|+++++|++++++++|||++
T Consensus 66 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 145 (637)
T PRK00174 66 LNVSYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACAR 145 (637)
T ss_pred eEHHHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 3443 45667788899999998643 135899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH---------HHhh----cC-CCcEEeccCCccccccccccccc
Q 013850 102 IGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD---------KVKD----LN-LPAVLLGSKDKVSSSGLISRSSK 167 (435)
Q Consensus 102 ~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
+|++++|+++.++.+++.++++.++++++|+++.... .+.. .. .+.+++...... ... .....
T Consensus 146 ~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~ 222 (637)
T PRK00174 146 IGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGG-DVD--WVEGR 222 (637)
T ss_pred cCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCC-CcC--cCCCC
Confidence 9999999999999999999999999999999875421 1111 11 122222211100 000 00111
Q ss_pred ccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHh-hhhhccCCCcEEEecchHHH
Q 013850 168 IVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPMFH 246 (435)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~d~~l~~~~l~~ 246 (435)
...++++..... .........++++++|+|||||||.||+|+++|++++........ ...+ ...|++++..|++|
T Consensus 223 ~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~ 298 (637)
T PRK00174 223 DLWWHELVAGAS--DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDY--KDGDVYWCTADVGW 298 (637)
T ss_pred cccHHHHHhhcC--CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCC--CCCcEEEEcCCchH
Confidence 233455543322 223344567889999999999999999999999998765433221 1222 23499999999999
Q ss_pred HHHHHHHHHhhhhcCcEEEecCC----CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc--cCCCCcceeEEEecCCC
Q 013850 247 VFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAP 320 (435)
Q Consensus 247 ~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~i~~gG~~ 320 (435)
+.+....++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|++.... ...++++||.+++||++
T Consensus 299 ~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~ 378 (637)
T PRK00174 299 VTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEP 378 (637)
T ss_pred hhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCC
Confidence 99987678999999999998753 4799999999999999999999999999886532 23567899999999999
Q ss_pred CcHHHHHHHHhhCCC--CeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeC
Q 013850 321 LGKELMEDCQKNIPG--ATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG 398 (435)
Q Consensus 321 l~~~~~~~~~~~~~~--~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g 398 (435)
+++++.+++.+.++. +++++.||+||+++......+.....+.+++|+|++|++++|+| ++|++++.|+.|||+++|
T Consensus 379 l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~v~g 457 (637)
T PRK00174 379 INPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLVIKD 457 (637)
T ss_pred CCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEEEcC
Confidence 999999999998863 78999999999987665433322234567899999999999999 689999999999999999
Q ss_pred --CCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 399 --PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 399 --~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
|+++.| ||++++.+.+.+ |-..+|||+|||+++
T Consensus 458 ~~p~~~~g--y~~~~~~~~~~~-~~~~~g~~~TGDl~~ 492 (637)
T PRK00174 458 PWPGMMRT--IYGDHERFVKTY-FSTFKGMYFTGDGAR 492 (637)
T ss_pred CCCccccc--ccCCHHHHHHhh-hcCCCCEEECCceEE
Confidence 689999 999998776644 223467999999864
No 35
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-52 Score=420.75 Aligned_cols=398 Identities=28% Similarity=0.371 Sum_probs=322.3
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.+++.++++++|+++|+++. ++.+||.||.+.++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 32 ~~l~~~~~~~~~~~p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 109 (573)
T PRK05605 32 TTLVDLYDNAVARFGDRPALDFF--GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVV 109 (573)
T ss_pred CCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 68999999999999999999986 5789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CCcEEeccCCcc-c-cc----------------ccccc
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKV-S-SS----------------GLISR 164 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~-~-~~----------------~~~~~ 164 (435)
+|++|.++.+++.++++.++++++|+++.....+.... .+.++....... . .. .....
T Consensus 110 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (573)
T PRK05605 110 VEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTGP 189 (573)
T ss_pred eecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeecccccccccccccccccccccccccccccC
Confidence 99999999999999999999999999887655443322 111111110000 0 00 00001
Q ss_pred cccccchhhhhhhcCCC--CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecc
Q 013850 165 SSKIVSFHDLIELSGSV--TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVL 242 (435)
Q Consensus 165 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~ 242 (435)
..+...|.++....... .........++++++++|||||||.||+|.++|+++...+.............++++++.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (573)
T PRK05605 190 APGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVLAAL 269 (573)
T ss_pred CCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEEEec
Confidence 12334455554332210 0022234567899999999999999999999999998775543222211122348999999
Q ss_pred hHHHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCc
Q 013850 243 PMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLG 322 (435)
Q Consensus 243 ~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~ 322 (435)
|++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|++++.|.+.......++++||.+++||++++
T Consensus 270 p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~~l~ 349 (573)
T PRK05605 270 PMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAMALP 349 (573)
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCCcCC
Confidence 99999998777888899999999998889999999999999999999999999999987777778899999999999999
Q ss_pred HHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCC-CccCCCCCceeEEEeCCCc
Q 013850 323 KELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDT-LKPLPPNQLGEIWVRGPNV 401 (435)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~-~~~~~~g~~Gei~v~g~~~ 401 (435)
+++.++|.+.++ .++++.||+||+++++....... ..+++++|.|+++++++|+|+++ +.+++.|+.|||+++|+.+
T Consensus 350 ~~~~~~~~~~~~-~~i~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~ 427 (573)
T PRK05605 350 VSTVELWEKLTG-GLLVEGYGLTETSPIIVGNPMSD-DRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQV 427 (573)
T ss_pred HHHHHHHHHHhC-CCeecccccchhchhhhcCCccc-CCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecCch
Confidence 999999999886 99999999999987766543332 34568999999999999999766 6899999999999999999
Q ss_pred cccccccCCcccccccccccccCcceecCCCCC
Q 013850 402 TPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 402 ~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+.| |+++++.+.+.| .+|||+|||++.
T Consensus 428 ~~g--y~~~~~~~~~~~----~~g~~~TGD~~~ 454 (573)
T PRK05605 428 FKG--YWNRPEETAKSF----LDGWFRTGDVVV 454 (573)
T ss_pred hhh--hcCChhHhhhcc----cCCCcccCCEEE
Confidence 999 999999998877 356899998763
No 36
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.3e-54 Score=377.67 Aligned_cols=384 Identities=23% Similarity=0.309 Sum_probs=326.1
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.+.|.+++.++|+++|+++++ +.+||+||.++++++|..|+++|+++||+|.+.+||..++++++||++++|+.+
T Consensus 28 ~~l~d~L~~~A~~~pdriAv~d~~--~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~P 105 (542)
T COG1021 28 RTLTDILTDHAARYPDRIAVIDGE--RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAP 105 (542)
T ss_pred CcHHHHHHHHHhhcCCceEEecCc--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcch
Confidence 689999999999999999999984 789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccc--------cHHHHhhcC--CCcEEeccCCcccccccccccccccchhhhhh
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPE--------LWDKVKDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~--------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (435)
|..=|.....++....+.++++..|.+.. +...+.... .+.+++..+... ....+..+.
T Consensus 106 VlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~-----------~~~~~~~~~ 174 (542)
T COG1021 106 VLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEH-----------PSVLEAALC 174 (542)
T ss_pred hhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCC-----------cchhhhhhh
Confidence 98888888899999999999999998752 223222222 355666543211 111111221
Q ss_pred hcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHH-HHH
Q 013850 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILY 255 (435)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~-~~~ 255 (435)
.... ...+.+..+++++++.+.+.||||.||.+..||.....++....+.+.+... .++++.+|..|.+.+.. ..+
T Consensus 175 ~~a~-~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~--tvyL~~LP~AHNfplssPG~L 251 (542)
T COG1021 175 HPAG-LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQ--TVYLCALPAAHNFPLSSPGAL 251 (542)
T ss_pred Cccc-cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCcc--ceEEEecccccCCCCCCcchh
Confidence 1111 2334566788899999999999999999999999999888887787777666 99999999999886643 378
Q ss_pred hhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCC
Q 013850 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG 335 (435)
Q Consensus 256 ~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~ 335 (435)
..+.+|+++|+.++.++.....+|++|+||+..++|.+...+++.......+++|||++.+||+.+++++.+++...++
T Consensus 252 Gv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~lg- 330 (542)
T COG1021 252 GVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVLG- 330 (542)
T ss_pred heeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhhC-
Confidence 9999999999999999999999999999999999999999999998888899999999999999999999999999997
Q ss_pred CeeecCcCcccccccccccCCCCCCcCCCCccccc-CCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccc
Q 013850 336 ATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFT 414 (435)
Q Consensus 336 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~ 414 (435)
+.+.+.|||.| |.+....-.+....-..+.|+|+ |.-+++|+| ++|+++++||+|+|..+||..+.| ||+.|+.+
T Consensus 331 C~LQQVFGMAE-GLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirG--Yyrap~HN 406 (542)
T COG1021 331 CQLQQVFGMAE-GLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRG--YYRAPEHN 406 (542)
T ss_pred chHHHHhhhhh-hhhcccccCCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeee--eccCchhh
Confidence 99999999999 33333322222244467899999 888999999 799999999999999999999999 99999999
Q ss_pred cccccccccCcceecCCCCC
Q 013850 415 LFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 415 ~~~~~~~~~~~~~~tgD~~~ 434 (435)
.+.| +.+|||+|||+++
T Consensus 407 a~aF---~a~GFYrsGD~V~ 423 (542)
T COG1021 407 ARAF---DADGFYRSGDLVR 423 (542)
T ss_pred hhcc---CcCCceecCceeE
Confidence 9988 4789999999864
No 37
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-52 Score=416.96 Aligned_cols=395 Identities=23% Similarity=0.383 Sum_probs=314.4
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
.|+.+.|.+.++++|+++|+++. ++.+||.||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~ 101 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLI 101 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 58999999999999999999976 4899999999999999999987 59999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CCcEEeccCCcccc-c---c------------ccccc
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSS-S---G------------LISRS 165 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~---~------------~~~~~ 165 (435)
++|++|.++.+++..+++.++++++|+++.....+.... .+.+++........ . . .....
T Consensus 102 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK05677 102 VVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHL 181 (562)
T ss_pred EeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccCC
Confidence 999999999999999999999999999877655443321 22222211100000 0 0 00000
Q ss_pred ccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhc-cCCCcEEEecchH
Q 013850 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPM 244 (435)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~~~d~~l~~~~l 244 (435)
.....+.+.+..... .........++++++|+|||||||.||+|.++|+++.............. ....+++++.+|+
T Consensus 182 ~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl 260 (562)
T PRK05677 182 PQAVKFNDALAKGAG-QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPL 260 (562)
T ss_pred cccccHHHHHhcCCC-CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcH
Confidence 112233333322221 12223345679999999999999999999999999987654433322221 1223789999999
Q ss_pred HHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcH
Q 013850 245 FHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGK 323 (435)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~ 323 (435)
+|.+++...++.++..|++.++.+ .+++..+++.++++++|.++++|+++..|.+........++++|.+++||+++++
T Consensus 261 ~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~ 340 (562)
T PRK05677 261 YHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQL 340 (562)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCH
Confidence 999998767778888888776664 5789999999999999999999999999988765555567899999999999999
Q ss_pred HHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccc
Q 013850 324 ELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTP 403 (435)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~ 403 (435)
++.+.|++.++ +++++.||+||++.++...... ..+++++|.|+++++++|+|+ ++..++.|+.|||+++|+.++.
T Consensus 341 ~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~d~-~~~~~~~g~~Gel~v~g~~~~~ 416 (562)
T PRK05677 341 ATAERWKEVTG-CAICEGYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVIDD-DGNELPLGEVGELCVKGPQVMK 416 (562)
T ss_pred HHHHHHHHHcC-CCeeccCCccccCcceeecCcc--CCCCCccCccCCCCEEEEECC-CCCCCCCCCCeEEEEecCccch
Confidence 99999999886 9999999999988766554332 345678999999999999994 7899999999999999999999
Q ss_pred cccccCCcccccccccccccCcceecCCCC
Q 013850 404 GIVYINFFVFTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 404 g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~ 433 (435)
| ||++++.+.+.| ..++||+|||++
T Consensus 417 g--Y~~~~~~t~~~~---~~~g~~~TGDlg 441 (562)
T PRK05677 417 G--YWQRPEATDEIL---DSDGWLKTGDIA 441 (562)
T ss_pred h--hcCCchhhhhcc---CCCCcccccceE
Confidence 9 999999998866 357899999986
No 38
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2e-52 Score=418.19 Aligned_cols=397 Identities=26% Similarity=0.361 Sum_probs=323.1
Q ss_pred CCCCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013850 22 PSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIA 101 (435)
Q Consensus 22 ~~~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 101 (435)
+..++.|+.+.|.+.++++|+++|+++.+.++.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 11 ~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~ 90 (559)
T PRK08315 11 VPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAK 90 (559)
T ss_pred CChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 33444789999999999999999999876678999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH-----HHhhcCCCc-----------------EEeccCCccccc
Q 013850 102 IGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD-----KVKDLNLPA-----------------VLLGSKDKVSSS 159 (435)
Q Consensus 102 ~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~-----------------~~~~~~~~~~~~ 159 (435)
+|++++|++|..+.+++..+++.++++++++++.... .+....... .++..+.
T Consensus 91 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 165 (559)
T PRK08315 91 IGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGD----- 165 (559)
T ss_pred hCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecc-----
Confidence 9999999999999999999999999999999875421 111110000 0111000
Q ss_pred ccccccccccchhhhhhhcCCC----CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCC
Q 013850 160 GLISRSSKIVSFHDLIELSGSV----TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD 235 (435)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~ 235 (435)
........+.++....... .........++++++++|||||||.||+|.++|+++...+........+.. +
T Consensus 166 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~ 240 (559)
T PRK08315 166 ---EKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTE--E 240 (559)
T ss_pred ---cCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCC--C
Confidence 0112223444443322100 011223456788999999999999999999999999887766555554433 3
Q ss_pred cEEEecchHHHHHHHHHHHHhhhhcCcEEEe-cCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEE
Q 013850 236 HVVLCVLPMFHVFGLSVILYDQLQKGNCVVS-MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLV 314 (435)
Q Consensus 236 d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~-~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i 314 (435)
|+++...|++|.+++...++.++..|+++++ ...+++..+++.++++++|++.++|+++..++.........+++||.+
T Consensus 241 d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~ 320 (559)
T PRK08315 241 DRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTG 320 (559)
T ss_pred ceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhhee
Confidence 9999999999999998788999999999984 457899999999999999999999999999988776666778999999
Q ss_pred EecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCC-CcCCCCcccccCCcEEEEEeCCCCccCCCCCcee
Q 013850 315 GSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG-VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGE 393 (435)
Q Consensus 315 ~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Ge 393 (435)
++||++++.++.+.+.+.++..++++.||+||++.+++....... ..+..++|+|+++++++|+|++++++++.|+.||
T Consensus 321 ~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GE 400 (559)
T PRK08315 321 IMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGE 400 (559)
T ss_pred EecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceE
Confidence 999999999999999999986679999999999876654433221 2356899999999999999987799999999999
Q ss_pred EEEeCCCccccccccCCcccccccccccccCcceecCCCC
Q 013850 394 IWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 394 i~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~ 433 (435)
|+++|++++.| ||++++.+...+ ..++||+|||++
T Consensus 401 l~v~g~~~~~g--y~~~~~~~~~~~---~~~~~~~TGD~~ 435 (559)
T PRK08315 401 LCTRGYSVMKG--YWNDPEKTAEAI---DADGWMHTGDLA 435 (559)
T ss_pred EEEECchhhhh--hcCChhHHhhcC---CCCCCEEccceE
Confidence 99999999999 999999888765 347799999976
No 39
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-52 Score=411.00 Aligned_cols=369 Identities=20% Similarity=0.252 Sum_probs=305.0
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
+++.+.|.++++++|+++|+.+. +..+||.||.++++++|+.|.+.| .+|++|+|+++|++++++++|||+++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~-~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 77 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN--DRVLTYKDWFESVCKVANWLNEKE-SKNKTIAILLENRIEFLQLFAGAAMAGWTC 77 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC--CcEeeHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 46889999999999999999986 489999999999999999999887 489999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|+++.++.+++..+++.+++++++++......+.......+.+ + .+.+...... .....
T Consensus 78 v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~--~~~~~ 137 (487)
T PRK07638 78 VPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEI--D----------------EWKRMIEKYL--PTYAP 137 (487)
T ss_pred EecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEe--h----------------hhhhhhhhcc--ccccc
Confidence 99999999999999999999999999986655443222111111 1 1111111111 11112
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
.....+++++|+|||||||.||+|.++|+++...+........+. .+|+++...|++|..++ ..++.++..|+++++
T Consensus 138 ~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~--~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~ 214 (487)
T PRK07638 138 IENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMK--REDSVLIAGTLVHSLFL-YGAISTLYVGQTVHL 214 (487)
T ss_pred cccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcC--CCCEEEEeecchHHHHH-HHHHHHHccCcEEEE
Confidence 222356789999999999999999999999988876555444443 33999999999999877 478889999999999
Q ss_pred cCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCccc
Q 013850 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTE 346 (435)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE 346 (435)
.+.+++..+++.++++++|++.++|+++..|.+... ...+.+.++++|++++.++.+++++.++++++++.||+||
T Consensus 215 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE 290 (487)
T PRK07638 215 MRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASE 290 (487)
T ss_pred cCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCc
Confidence 999999999999999999999999999999988632 2345566778889999999999999998899999999999
Q ss_pred ccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcc
Q 013850 347 TCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSF 426 (435)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~ 426 (435)
++.+..... .....+.+++|.|+++++++|+| ++|.++++|+.|||+++|+.++.| ||++++.+.+.+ .+||
T Consensus 291 ~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~----~~g~ 362 (487)
T PRK07638 291 LSFVTALVD-EESERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMG--YIIGGVLARELN----ADGW 362 (487)
T ss_pred cCceEEecc-cccCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceee--ecCCHHHHhhhc----cCCc
Confidence 987665443 22245678999999999999999 589999999999999999999999 999998876654 4789
Q ss_pred eecCCCC
Q 013850 427 IRGKDQQ 433 (435)
Q Consensus 427 ~~tgD~~ 433 (435)
|+|||++
T Consensus 363 ~~TGDl~ 369 (487)
T PRK07638 363 MTVRDVG 369 (487)
T ss_pred EecCccE
Confidence 9999986
No 40
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9e-53 Score=430.15 Aligned_cols=367 Identities=22% Similarity=0.302 Sum_probs=300.9
Q ss_pred CchHHHHHhhccc--CCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 27 FSMVHFLFRNSAS--YSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 27 ~tl~~~l~~~~~~--~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
.|+.++|.++++. +|+++|+++. ..+||+||.++++++|+.|.+.|+++||+|+|+++|++++++++|||+++|+
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~ 80 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA---DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGV 80 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec---CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 4788999888875 7999999864 4799999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCC
Q 013850 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDI 184 (435)
Q Consensus 105 ~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (435)
+++|++|.++.+++.++++.++++++|++......+.... +. .....+.........
T Consensus 81 ~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~-------------------~~~~~~~~~~~~~~~ 137 (705)
T PRK06060 81 MAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSR----VA-------------------EAAELMSEAARVAPG 137 (705)
T ss_pred EEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccc----cc-------------------hhhhhhhhccccCCC
Confidence 9999999999999999999999999999876544332110 00 001111110000011
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHh-hhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcE
Q 013850 185 PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (435)
Q Consensus 185 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~ 263 (435)
......++++++|+|||||||.||+|.++|+++.+.+..... ...+ ...+++++..|++|.+++...++.++..|++
T Consensus 138 ~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~ 215 (705)
T PRK06060 138 GYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRL--TPEDTGLCSARMYFAYGLGNSVWFPLATGGS 215 (705)
T ss_pred CCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCC--CCcceeEEeccchhhcchhHHHHHHHhcCCE
Confidence 112345789999999999999999999999999887654432 2333 2338999999999998886678889999999
Q ss_pred EEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCc
Q 013850 264 VVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 342 (435)
Q Consensus 264 i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~y 342 (435)
+++.+ .+++..++..++++++|+++++|+++..|++... ...+++||.+++||+++++++.+++.+.++++++++.|
T Consensus 216 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~Y 293 (705)
T PRK06060 216 AVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGI 293 (705)
T ss_pred EEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeee
Confidence 99986 5788999999999999999999999999987543 34578999999999999999999999999879999999
Q ss_pred CcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccc
Q 013850 343 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEH 422 (435)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~ 422 (435)
|+||++......... ..+.+++|+|+++++++|+| ++++++++|+.|||+++|++++.| ||++++.+..
T Consensus 294 G~tE~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~G--Y~~~~~~~~~------ 362 (705)
T PRK06060 294 GSTEVGQTFVSNRVD--EWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKG--YWNRPDSPVA------ 362 (705)
T ss_pred eccccCceEEeccCC--CCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhh--hhCCCccccc------
Confidence 999987655433222 34567899999999999999 578999999999999999999999 9999987532
Q ss_pred cCcceecCCCCC
Q 013850 423 TDSFIRGKDQQT 434 (435)
Q Consensus 423 ~~~~~~tgD~~~ 434 (435)
.++||+|||+++
T Consensus 363 ~~~~~~TGDl~~ 374 (705)
T PRK06060 363 NEGWLDTRDRVC 374 (705)
T ss_pred CCCcEECCeeEE
Confidence 467999999764
No 41
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-52 Score=412.56 Aligned_cols=374 Identities=25% Similarity=0.347 Sum_probs=312.8
Q ss_pred chHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 28 tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.+.+.|.++++.+|+++|+++. ++.+||.||.++++++|+.|++ .|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 80 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIA 80 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 4789999999999999999986 5899999999999999999975 799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCC---cEEeccCCcccccccccccccccchhhhhhhcCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP---AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (435)
+|+++.++.+++..+++.+++++++++++..+.+...... ..++.. .++.+......
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~---- 140 (496)
T PRK06839 81 VPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISI----------------TSLKEIEDRKI---- 140 (496)
T ss_pred EecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEe----------------cchHhhhccCC----
Confidence 9999999999999999999999999998776655443211 011110 11222221111
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcE
Q 013850 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (435)
Q Consensus 184 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~ 263 (435)
.......++++++|+|||||||.||+|.++|.++............+ ..+|++++.+|++|.+|+...++.++..|++
T Consensus 141 ~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~ 218 (496)
T PRK06839 141 DNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDL--TMHDRSIVLLPLFHIGGIGLFAFPTLFAGGV 218 (496)
T ss_pred CCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCC--CCCCeEEEeeCCcchhhHHHHHHHHHhcCcE
Confidence 11223456899999999999999999999999987654443333333 3348999999999999997677889999999
Q ss_pred EEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcC
Q 013850 264 VVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYG 343 (435)
Q Consensus 264 i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG 343 (435)
+++.+.+++..+++.++++++|++.++|++++.|++.......+++++|.+++||+++++++.+.+++. ++++.+.||
T Consensus 219 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG 296 (496)
T PRK06839 219 IIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFG 296 (496)
T ss_pred EEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeecc
Confidence 999999999999999999999999999999999999877667788999999999999999999999887 599999999
Q ss_pred cccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccccccc
Q 013850 344 MTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHT 423 (435)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~ 423 (435)
+||++..+............+++|+|+++++++|+|+ ++..++.|+.|||+++|+.++.| ||++++.+...+ .
T Consensus 297 ~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~----~ 369 (496)
T PRK06839 297 MTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDE-NKNKVEVGEVGELLIRGPNVMKE--YWNRPDATEETI----Q 369 (496)
T ss_pred CCCCCcceEecccccccccCCCCcccCCCceEEEECC-CcCCCCCCCceEEEEECCCcchh--hcCChHHHHHHH----c
Confidence 9999876544433322456789999999999999995 66679999999999999999999 999999988766 4
Q ss_pred CcceecCCCCC
Q 013850 424 DSFIRGKDQQT 434 (435)
Q Consensus 424 ~~~~~tgD~~~ 434 (435)
+|||+|||+++
T Consensus 370 ~g~~~TGDl~~ 380 (496)
T PRK06839 370 DGWLCTGDLAR 380 (496)
T ss_pred CCCeeecceEE
Confidence 67888888763
No 42
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.5e-52 Score=413.55 Aligned_cols=385 Identities=25% Similarity=0.350 Sum_probs=320.3
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
+|+.+.|.++++.+|+++|++.. ++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 17 ~n~~~~~~~~a~~~~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 94 (542)
T PRK07786 17 QNWVNQLARHALMQPDAPALRFL--GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIA 94 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 78999999999999999999977 4799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCcccccccccccccccchhhhhhhcCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (435)
+|+++..+.+++..+++.++++++++++.....+.... .+.++...+ .......++++++....
T Consensus 95 vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-- 163 (542)
T PRK07786 95 VPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGG---------SSDDSVLGYEDLLAEAG-- 163 (542)
T ss_pred EEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecC---------CCcccccCHHHHhhccC--
Confidence 99999999999999999999999999987766554332 122222211 11122345555554332
Q ss_pred CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcC
Q 013850 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (435)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G 261 (435)
..........+++++++|||||||.||+|.++|+++...+........+ ...++++++..|++|.+|+ ..++.++..|
T Consensus 164 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G 241 (542)
T PRK07786 164 PAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGA-DINSDVGFVGVPLFHIAGI-GSMLPGLLLG 241 (542)
T ss_pred CCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCC-CCCCceEEEecchHHHHHH-HHHHHHHHcc
Confidence 2223344566789999999999999999999999998877665444433 2234899999999999998 4888999999
Q ss_pred cEEEecC--CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeee
Q 013850 262 NCVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIF 339 (435)
Q Consensus 262 ~~i~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~ 339 (435)
+++++.+ .+++..+++.++++++|.++++|+++..|.......... .++|.+++||+++++++.+.+++.|++.+++
T Consensus 242 ~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~ 320 (542)
T PRK07786 242 APTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQIL 320 (542)
T ss_pred CEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEE
Confidence 9999864 579999999999999999999999999998875544333 3799999999999999999999999889999
Q ss_pred cCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc
Q 013850 340 QGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 419 (435)
Q Consensus 340 ~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~ 419 (435)
+.||+||++.+.............+++|+|++++.++|+| +++..++.|+.|||+++|+.++.| |+++++.+++.|
T Consensus 321 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~g--y~~~~~~~~~~f- 396 (542)
T PRK07786 321 AAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSG--YWNNPEATAEAF- 396 (542)
T ss_pred eeecccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhh--hcCCHHHHHHHh-
Confidence 9999999987665443333234567899999999999999 578999999999999999999999 999999998877
Q ss_pred ccccCcceecCCCCC
Q 013850 420 CEHTDSFIRGKDQQT 434 (435)
Q Consensus 420 ~~~~~~~~~tgD~~~ 434 (435)
.++||+|||+++
T Consensus 397 ---~~~~~~TGDl~~ 408 (542)
T PRK07786 397 ---AGGWFHSGDLVR 408 (542)
T ss_pred ---hCCcccccceEE
Confidence 367888888763
No 43
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.4e-52 Score=408.54 Aligned_cols=368 Identities=28% Similarity=0.360 Sum_probs=309.7
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
+|+.+.|.++++++|+++|+++.+ +.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEE--KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVA 79 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEE
Confidence 589999999999999999999874 899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|+++..+.+++..++++++++.+++++.....+..... ..++++...... .....
T Consensus 80 v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~-~~~~~ 135 (483)
T PRK03640 80 VLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS-----------------------VKFAELMNGPKE-EAEIQ 135 (483)
T ss_pred EecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc-----------------------ccHHHHhhcccc-cCCCC
Confidence 999999999999999999999999998766544322110 012222222111 12223
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....++++++++|||||||.||+|.++|.++...+........+ ...|++++.+|++|+.++. .++.++..|+++++
T Consensus 136 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~ 212 (483)
T PRK03640 136 EEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGL--TEDDCWLAAVPIFHISGLS-ILMRSVIYGMRVVL 212 (483)
T ss_pred CCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCC--CcCcEEEEecCHHHHHHHH-HHHHHHhcCCEEEe
Confidence 44567899999999999999999999999998776555444433 3349999999999999985 67888999999999
Q ss_pred cCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCccc
Q 013850 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTE 346 (435)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE 346 (435)
.+.+++..+++.++++++|++.++|+++..|.+..... ....+||.+++||+++++.+++.+++. ++++++.||+||
T Consensus 213 ~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE 289 (483)
T PRK03640 213 VEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTE 289 (483)
T ss_pred cCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCc
Confidence 99999999999999999999999999999998764332 334689999999999999999998875 599999999999
Q ss_pred ccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcc
Q 013850 347 TCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSF 426 (435)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~ 426 (435)
++..+..........+.+++|+|+++++++|.|+ +++++.|+.|||+++|++++.| |+++++.+...| .++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~--~~~~~~g~~Gel~v~g~~~~~g--y~~~~~~~~~~~----~~~~ 361 (483)
T PRK03640 290 TASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD--GVVVPPFEEGEIVVKGPNVTKG--YLNREDATRETF----QDGW 361 (483)
T ss_pred ccccccccCcccccccCCCcccccCCcEEEEecC--CCcCCCCCceEEEEECcchhhh--hcCCHHHHHHHH----hcCC
Confidence 8865554444433456789999999999999884 3789999999999999999999 999999998877 4678
Q ss_pred eecCCCCC
Q 013850 427 IRGKDQQT 434 (435)
Q Consensus 427 ~~tgD~~~ 434 (435)
|+|||+++
T Consensus 362 ~~tGDl~~ 369 (483)
T PRK03640 362 FKTGDIGY 369 (483)
T ss_pred eeccceEE
Confidence 99998753
No 44
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=7.7e-52 Score=412.66 Aligned_cols=387 Identities=24% Similarity=0.331 Sum_probs=314.8
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.++|.++++.+|+++|+++.+ ++.+||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 23 ~~l~~~~~~~~~~~pd~~a~~~~~-~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 101 (547)
T PRK06087 23 ASLADYWQQTARAMPDKIAVVDNH-GASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVS 101 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEcCC-CCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 679999999999999999999763 5789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEcccc-----HHHHhh----cC-CCcEEeccCCcccccccccccccccchhhhhh
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPEL-----WDKVKD----LN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~-----~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (435)
+|+++.++.+++..+++.++++++++++.. .+.+.. .. .+.++..... ........+.++..
T Consensus 102 v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 173 (547)
T PRK06087 102 VPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKL--------APATSSLSLSQIIA 173 (547)
T ss_pred eccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCc--------CCCcCccCHHHHhc
Confidence 999999999999999999999999997532 222211 11 1112221110 01111224444443
Q ss_pred hcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHh
Q 013850 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYD 256 (435)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~ 256 (435)
... .........++++++|+|||||||.||+|.++|.++............+. .++++++.+|++|.+++...++.
T Consensus 174 ~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~--~~d~~l~~~pl~h~~g~~~~~~~ 249 (547)
T PRK06087 174 DYE--PLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLT--WQDVFMMPAPLGHATGFLHGVTA 249 (547)
T ss_pred cCC--cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCC--CCCeEEEecchHHHHHHHHHHHH
Confidence 322 11123345678999999999999999999999999987766544444443 34999999999999998778899
Q ss_pred hhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCC
Q 013850 257 QLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (435)
Q Consensus 257 ~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 336 (435)
++..|+++++.+.+++..+++.++++++|++..+|+.+..+++.......+++++|.+++||+++++++.+.+.+. ++
T Consensus 250 ~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~ 327 (547)
T PRK06087 250 PFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GI 327 (547)
T ss_pred HHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CC
Confidence 9999999999999999999999999999999999888877877665556678899999999999999999988775 59
Q ss_pred eeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccc
Q 013850 337 TIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLF 416 (435)
Q Consensus 337 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~ 416 (435)
++++.||+||++.+..............++|.|+++++++++| +++.+++.|+.|||+++|+.++.| ||++++.+..
T Consensus 328 ~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~g--y~~~~~~~~~ 404 (547)
T PRK06087 328 KLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMG--YLDEPELTAR 404 (547)
T ss_pred cEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEeccccccc--ccCCHHHHHH
Confidence 9999999999887665443222123456789999999999999 688999999999999999999999 9999999877
Q ss_pred cccccccCcceecCCCCC
Q 013850 417 LWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 417 ~~~~~~~~~~~~tgD~~~ 434 (435)
.+ .+++||+|||+++
T Consensus 405 ~~---~~~g~~~TGDl~~ 419 (547)
T PRK06087 405 AL---DEEGWYYSGDLCR 419 (547)
T ss_pred Hh---CCCCCcCcCceEE
Confidence 65 3578999999763
No 45
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.1e-52 Score=411.76 Aligned_cols=377 Identities=20% Similarity=0.234 Sum_probs=306.5
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.+.|.++++++|+++|+++. +..+||.||.++++++|++|.++|+++||+|+++++|+++++++++||+++|+++
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 120 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDE--LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADI 120 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEE
Confidence 68999999999999999999976 4799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC----CcEEeccCCcccccccccccccccchhhhhhhcCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT 182 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (435)
+|+++.++.+++.++++.++++++|++......+..... ...++.... ......++.+..... .
T Consensus 121 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~ 188 (537)
T PRK13382 121 LLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTD----------EDHDLTVEVLIAAHA--G 188 (537)
T ss_pred EecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecC----------CcccccHHHHhhccC--c
Confidence 999999999999999999999999999877655543211 111111110 001123333332211 1
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCc
Q 013850 183 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (435)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~ 262 (435)
. .....+++.++++|||||||.||+|.++|+++............+. .+++++...|++|.+++. .++.++..|+
T Consensus 189 -~-~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~--~~~~~l~~~p~~~~~g~~-~~~~~l~~g~ 263 (537)
T PRK13382 189 -Q-RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWR--AEEPTVIVAPMFHAWGFS-QLVLAASLAC 263 (537)
T ss_pred -C-CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCC--CCCeEEEecChHhhhHHH-HHHHHHhcCc
Confidence 1 1123468899999999999999999999988877765544444333 348999999999999984 7888899999
Q ss_pred EEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc--cCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeec
Q 013850 263 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (435)
Q Consensus 263 ~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~ 340 (435)
++++...+++..+++.|+++++|++.++|+++..|++.... ...+++++|.+++||+++++++.+.|.+.++ .++++
T Consensus 264 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~~ 342 (537)
T PRK13382 264 TIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG-DVIYN 342 (537)
T ss_pred EEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC-CcEEe
Confidence 99999899999999999999999999999999999876432 2345678999999999999999999999997 88999
Q ss_pred CcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccc
Q 013850 341 GYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC 420 (435)
Q Consensus 341 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~ 420 (435)
.||+||++.++.... ......++++|+|+++++++|+| +++++++.|+.|||+++|++++.| |+ ++.+.. +
T Consensus 343 ~YG~TE~~~~~~~~~-~~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~g--Y~--~~~~~~-~-- 413 (537)
T PRK13382 343 NYNATEAGMIATATP-ADLRAAPDTAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDG--YT--SGSTKD-F-- 413 (537)
T ss_pred cccccccCcceecCh-hHhccCCCCccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccC--cc--ccchhh-c--
Confidence 999999887655332 22234568999999999999999 578999999999999999999999 98 444443 2
Q ss_pred cccCcceecCCCCC
Q 013850 421 EHTDSFIRGKDQQT 434 (435)
Q Consensus 421 ~~~~~~~~tgD~~~ 434 (435)
.+|||+|||+++
T Consensus 414 --~~g~~~TGDl~~ 425 (537)
T PRK13382 414 --HDGFMASGDVGY 425 (537)
T ss_pred --cCCCEeeCceEE
Confidence 257899999763
No 46
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9e-52 Score=407.74 Aligned_cols=381 Identities=25% Similarity=0.329 Sum_probs=315.4
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
+++.+.|.++++++|+++|+++. ++.+||.||.+++.++|..|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYR--DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVF 79 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEEC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 47889999999999999999886 5899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|+++..+.+++..+++.+++++++++++........ .....+.... . ..+..+..... .....
T Consensus 80 v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~----------~---~~~~~~~~~~~--~~~~~ 143 (497)
T PRK06145 80 LPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVALE-TPKIVIDAAA----------Q---ADSRRLAQGGL--EIPPQ 143 (497)
T ss_pred EecccccCHHHHHHHHHhcCCcEEEEccchhhhhhcc-cceEEecCcc----------c---chhHHHhccCC--CCCCC
Confidence 9999999999999999999999999987765443211 1111111100 0 00111110000 11122
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....++++++++|||||||.||+|.++|+++...+......... ..+++++...|++|.+++....+.++..|+++++
T Consensus 144 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~ 221 (497)
T PRK06145 144 AAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGL--TASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRI 221 (497)
T ss_pred CCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCC--CCCcEEEEecCchhHhHHHHHHHHHHhccCEEEE
Confidence 34567899999999999999999999999998665443333333 3338999999999999987667888999999999
Q ss_pred cCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCccc
Q 013850 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTE 346 (435)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE 346 (435)
.+.+++..+++.++++++|.+.++|+++..|+........+++++|.+++||+++++++.+.+.+.|++.++++.||+||
T Consensus 222 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE 301 (497)
T PRK06145 222 HREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTE 301 (497)
T ss_pred CCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcc
Confidence 99899999999999999999999999999999876666667889999999999999999999999998899999999999
Q ss_pred ccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcc
Q 013850 347 TCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSF 426 (435)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~ 426 (435)
+++..+.........+.+++|+|++++++++.| ++++.++.|+.|||+++|++++.| ||++++.+.+.| .++|
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~G--y~~~~~~~~~~~----~~~~ 374 (497)
T PRK06145 302 TCSGDTLMEAGREIEKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKG--YWKDPEKTAEAF----YGDW 374 (497)
T ss_pred cCCcceeccCccccccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhh--hcCChHHHHHHH----hCCC
Confidence 987655433322234567899999999999999 578899999999999999999999 999999998877 3678
Q ss_pred eecCCCCC
Q 013850 427 IRGKDQQT 434 (435)
Q Consensus 427 ~~tgD~~~ 434 (435)
|+|||+++
T Consensus 375 ~~TGDl~~ 382 (497)
T PRK06145 375 FRSGDVGY 382 (497)
T ss_pred eeccceEE
Confidence 99998763
No 47
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.4e-51 Score=408.83 Aligned_cols=383 Identities=21% Similarity=0.267 Sum_probs=311.7
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.++|.++++.+|+++|+++. ++.+||.||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 23 ~~l~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 100 (527)
T TIGR02275 23 KPLTDILRDQAARYPDAIAIICG--NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAP 100 (527)
T ss_pred CcHHHHHHHHHHHCCCceEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEE
Confidence 57999999999999999999986 5899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccH--------HHHhhcC--CCcEEeccCCcccccccccccccccchhhhhh
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELW--------DKVKDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (435)
+++++..+.+++..+++.++++.+++++... ..+.... ....++.... . ....+...+.
T Consensus 101 v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~ 169 (527)
T TIGR02275 101 VLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQT----------R-VEAELFLWLE 169 (527)
T ss_pred eccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCC----------C-CcchhhHHhh
Confidence 9999999999999999999999999986531 1121111 1111111110 0 0001111111
Q ss_pred hcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHH-HHH
Q 013850 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILY 255 (435)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~-~~~ 255 (435)
... .........++++++|+|||||||.||+|.++|+++...+........+.. +|++++.+|++|.+++.. .++
T Consensus 170 ~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~d~~l~~~P~~h~~~~~~~~~~ 245 (527)
T TIGR02275 170 SPA--EPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQ--QTRYLCALPAAHNYPLSSPGAL 245 (527)
T ss_pred CcC--ccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCc--CCEEEECCChHhhhhhhHHHHH
Confidence 111 112233557899999999999999999999999999888766555444433 499999999999998854 478
Q ss_pred hhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCC
Q 013850 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG 335 (435)
Q Consensus 256 ~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~ 335 (435)
.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+.......+++++|.+++||++++.++.+++.+.++
T Consensus 246 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g- 324 (527)
T TIGR02275 246 GVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFG- 324 (527)
T ss_pred HHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHhC-
Confidence 8899999999998889999999999999999999999999998877666677899999999999999999999999996
Q ss_pred CeeecCcCcccccccccccCCCCCCcCCCCccccc-CCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccc
Q 013850 336 ATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFT 414 (435)
Q Consensus 336 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~ 414 (435)
+++++.||+||++..... .........+++|+|+ ++.+++|+| +++++++.|+.|||+++|+.++.| ||++++.+
T Consensus 325 ~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~g--Y~~~~~~~ 400 (527)
T TIGR02275 325 CQLQQVFGMAEGLVNYTR-LDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRG--YYKAPEHN 400 (527)
T ss_pred CeEEeeeccCccCccccC-CCCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchh--hcCChhHh
Confidence 999999999996533322 1111133456899999 589999999 688999999999999999999999 99999998
Q ss_pred cccccccccCcceecCCCCC
Q 013850 415 LFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 415 ~~~~~~~~~~~~~~tgD~~~ 434 (435)
.+.+ +.++||+|||+++
T Consensus 401 ~~~~---~~dg~~~TGDl~~ 417 (527)
T TIGR02275 401 AAAF---DAEGFYYTGDLVR 417 (527)
T ss_pred Hhhc---CcCCCEEcCceEE
Confidence 8766 3578999999763
No 48
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.5e-51 Score=407.03 Aligned_cols=382 Identities=26% Similarity=0.357 Sum_probs=317.3
Q ss_pred CCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 26 ~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
+.++.+.+.+++ .+|+++|+.+.+ ++.+||.||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~-~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~ 79 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPD-GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAV 79 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCC-CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 368999999999 999999998753 689999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCC---cEEeccCCcccccccccccccccchhhhhhhcCCCC
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP---AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT 182 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (435)
++|+++.++.+++..+++.++++++++++...+.+...... ..+...+. . ....+.+...... .
T Consensus 80 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~--~ 146 (504)
T PRK07514 80 FLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDA--------D---GTGSLLEAAAAAP--D 146 (504)
T ss_pred EEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecC--------C---CcccHHHhhhhcC--c
Confidence 99999999999999999999999999998877665443211 10111110 0 0011111111111 2
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCc
Q 013850 183 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (435)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~ 262 (435)
........++++++|+|||||||.||+|.++|+++...+........+.. +|++++.+|++|..++...++.++..|+
T Consensus 147 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 224 (504)
T PRK07514 147 DFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTP--DDVLIHALPIFHTHGLFVATNVALLAGA 224 (504)
T ss_pred ccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCC--ccEEEEecchHHHHHHHHHHHHHHhcCc
Confidence 22234456889999999999999999999999999988666554444433 4999999999999998777889999999
Q ss_pred EEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCc
Q 013850 263 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 342 (435)
Q Consensus 263 ~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~y 342 (435)
++++.+..++..+++.+. ++|.+.++|.++..+++........++++|.+++||+++++++.+.|++.++ .++++.|
T Consensus 225 ~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~~Y 301 (504)
T PRK07514 225 SMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTG-HAILERY 301 (504)
T ss_pred EEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhC-Ccceeec
Confidence 999999899999999994 6999999999999999887666677889999999999999999999999986 8999999
Q ss_pred CcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccc
Q 013850 343 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEH 422 (435)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~ 422 (435)
|+||++......... ....+++|.|+++++++|+|++++.+++.|+.|||+++|++++.| |+++++.+.+.| .
T Consensus 302 G~tE~~~~~~~~~~~--~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~g--y~~~~~~~~~~~---~ 374 (504)
T PRK07514 302 GMTETNMNTSNPYDG--ERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKG--YWRMPEKTAEEF---R 374 (504)
T ss_pred ccccccccccCCccc--cccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCcccc--ccCCchhhhhhc---c
Confidence 999987654432211 345678999999999999998899999999999999999999999 999999988876 3
Q ss_pred cCcceecCCCCC
Q 013850 423 TDSFIRGKDQQT 434 (435)
Q Consensus 423 ~~~~~~tgD~~~ 434 (435)
.++||+|||+++
T Consensus 375 ~~~~~~TGDl~~ 386 (504)
T PRK07514 375 ADGFFITGDLGK 386 (504)
T ss_pred cCCCeeecceEE
Confidence 467999999763
No 49
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-52 Score=422.31 Aligned_cols=383 Identities=23% Similarity=0.310 Sum_probs=299.4
Q ss_pred CCCchHHHHHhhcccCCCceeeeecC-----C--CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHH
Q 013850 25 PSFSMVHFLFRNSASYSSKLALIDAD-----S--DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL 97 (435)
Q Consensus 25 ~~~tl~~~l~~~~~~~p~~~a~~~~~-----~--~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~l 97 (435)
++.|+.++|.++++.+|+++|++..+ . .+.+||+||.++++++|+.|++. +++||+|+++++|++++++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 34799999999999999999998632 1 25799999999999999999886 8999999999999999999999
Q ss_pred HHHHcCcEEEec-CCCCC--HHHHHHHHHhcCCeEEEEccccHHHHhhcCCC------cEEeccCCcccccccccccccc
Q 013850 98 GVIAIGAIASTA-NPVYT--VSELSKQVKDSNPKLVITVPELWDKVKDLNLP------AVLLGSKDKVSSSGLISRSSKI 168 (435)
Q Consensus 98 A~~~~G~~~v~i-~~~~~--~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 168 (435)
||+++|++++|+ ++..+ .+++.++++.++++++|++++..+.+...... ..++..+.
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 163 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDA-------------- 163 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccc--------------
Confidence 999999999999 45554 57899999999999999998765544332100 01111110
Q ss_pred cchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHH
Q 013850 169 VSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVF 248 (435)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~ 248 (435)
+.+.. . .........++++++|+|||||||.||+|.++|+++............+ ..++++++.+|++|.+
T Consensus 164 --~~~~~---~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~--~~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 164 --VPDEV---G--ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEG--QEGDRGVSWLPFFHDM 234 (631)
T ss_pred --ccccc---c--cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCC--CCcceEEEeCCCcCch
Confidence 00000 0 1111224567899999999999999999999999998876655444433 3349999999999999
Q ss_pred HHHHHHHhhhhcCcEEEecCC--C--CHHHHHHHHHhcCc---eEEEecHHHHHHHHhcc---c--ccCCCCcceeEEEe
Q 013850 249 GLSVILYDQLQKGNCVVSMGK--F--DIEMALRAIEKYRV---TVWWVVPPIILALAKNS---L--VRKFDISSLKLVGS 316 (435)
Q Consensus 249 g~~~~~~~~l~~G~~i~~~~~--~--~~~~~~~~l~~~~~---t~~~~~P~~~~~l~~~~---~--~~~~~l~~lr~i~~ 316 (435)
|+. .++.++..|+++++..+ + ++..+++.+.++++ +.+.++|+++..+.... . ....++++||.+++
T Consensus 235 gl~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~ 313 (631)
T PRK07769 235 GLI-TVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLN 313 (631)
T ss_pred hhH-HHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEe
Confidence 996 55666778998887753 4 88999999999886 78999999887776531 1 11457889999999
Q ss_pred cCCCCcHHHHHHHHhhCC-----CCeeecCcCcccccccccccCCCCC-------------------------CcCCCCc
Q 013850 317 GAAPLGKELMEDCQKNIP-----GATIFQGYGMTETCAPISLENPLVG-------------------------VRRSGSA 366 (435)
Q Consensus 317 gG~~l~~~~~~~~~~~~~-----~~~~~~~yG~tE~~~~~~~~~~~~~-------------------------~~~~~~~ 366 (435)
||+++++++.++|.+.|+ ...+++.||+||++..++....... .....++
T Consensus 314 gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~ 393 (631)
T PRK07769 314 GSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSA 393 (631)
T ss_pred ccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeC
Confidence 999999999999999873 2469999999998766554322110 0112478
Q ss_pred ccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc-c-------------cccCcceecCCC
Q 013850 367 GTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG-C-------------EHTDSFIRGKDQ 432 (435)
Q Consensus 367 G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~-~-------------~~~~~~~~tgD~ 432 (435)
|+|+++.+++|+|++++++++.|+.|||+++||+++.| ||++++.|.+.|. + ...++||+|||+
T Consensus 394 G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~G--Y~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDl 471 (631)
T PRK07769 394 GKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTG--YWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDY 471 (631)
T ss_pred CCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCcccc--ccCChhHHHHHHhhhcccccccccccCcccCCCeeecccc
Confidence 99999999999998889999999999999999999999 9999999988772 1 123589999999
Q ss_pred CC
Q 013850 433 QT 434 (435)
Q Consensus 433 ~~ 434 (435)
++
T Consensus 472 g~ 473 (631)
T PRK07769 472 GV 473 (631)
T ss_pred cc
Confidence 85
No 50
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=8.3e-52 Score=446.44 Aligned_cols=395 Identities=25% Similarity=0.341 Sum_probs=319.7
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.+.+.++++++|+++|+++.. ++.+||+||.++++++|+.|++ ++++||+|+++++|+++++++++||+++|+++
T Consensus 615 ~~l~~~~~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~ 692 (1146)
T PRK08633 615 PPLAEAWIDTAKRNWSRLAVADST-GGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGKVP 692 (1146)
T ss_pred CCHHHHHHHHHHhcCCCcEEEcCC-CCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCCEE
Confidence 678999999999999999999752 5799999999999999999987 58999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhc------CCCcEEeccCCcccccccccccccccchhhhhhhcCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL------NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (435)
+|+++..+.+++.++++++++++++++++..+.+... .....++..+... ........+.+.......
T Consensus 693 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 766 (1146)
T PRK08633 693 VNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLK------AKISKVDKLTALLAARLL 766 (1146)
T ss_pred EEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhc------cccchhHHHHHHHHhccC
Confidence 9999999999999999999999999998777666421 1111111111000 000001112211111100
Q ss_pred CC----CCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHh
Q 013850 181 VT----DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYD 256 (435)
Q Consensus 181 ~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~ 256 (435)
+. ........++++++|+|||||||.||+|.++|+++.............. .+|++++.+|++|.+++...++.
T Consensus 767 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~--~~d~~l~~~p~~h~~g~~~~~~~ 844 (1146)
T PRK08633 767 PARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLR--NDDVILSSLPFFHSFGLTVTLWL 844 (1146)
T ss_pred CHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCC--CCCEEEEcCcHHHHHhHHHHHHH
Confidence 00 0002345689999999999999999999999999998876655544443 34999999999999999766889
Q ss_pred hhhcCcEEEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCC
Q 013850 257 QLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG 335 (435)
Q Consensus 257 ~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~ 335 (435)
++..|+++++.+ .+++..+++.++++++|++.++|++++.+.+.....+.+++++|.+++||+++++++.+++++.++
T Consensus 845 ~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g- 923 (1146)
T PRK08633 845 PLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKFG- 923 (1146)
T ss_pred HHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHhC-
Confidence 999999998875 578999999999999999999999999999876666678899999999999999999999999996
Q ss_pred CeeecCcCcccccccccccCCCC--------CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccc
Q 013850 336 ATIFQGYGMTETCAPISLENPLV--------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVY 407 (435)
Q Consensus 336 ~~~~~~yG~tE~~~~~~~~~~~~--------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y 407 (435)
+++++.||+||+++++....++. ...+.+++|+|+||++++|+|+++++++++|+.|||+++|++++.| |
T Consensus 924 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g--Y 1001 (1146)
T PRK08633 924 IRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKG--Y 1001 (1146)
T ss_pred CCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCcccc--c
Confidence 99999999999987766543221 1235678999999999999998899999999999999999999999 9
Q ss_pred cCCcccccccccccccCcceecCCCCC
Q 013850 408 INFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
|++++.+.+.+.-.+.++||+|||+++
T Consensus 1002 ~~~~~~t~~~~~~~~~~~~~~TGD~~~ 1028 (1146)
T PRK08633 1002 LGDPEKTAEVIKDIDGIGWYVTGDKGH 1028 (1146)
T ss_pred cCCccchHHHhhcCCCCCeEECCCEEE
Confidence 999999988773122348999999864
No 51
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-52 Score=411.28 Aligned_cols=385 Identities=18% Similarity=0.267 Sum_probs=298.8
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.+.|.++++++|+++|+++.+.+..+||+||.++++++|+.|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 14 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~ 93 (540)
T PRK05857 14 STVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIA 93 (540)
T ss_pred cchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 58999999999999999999876545789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC---CCcEEeccCCcccccccccccccccchhhhhhhcCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (435)
+|+++.++.+++.++++.++++.+|+++.......... ....++..+.. ... ..+....... ..
T Consensus 94 v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~---~~ 160 (540)
T PRK05857 94 VMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIA--------AVT--RESEHSLDAA---SL 160 (540)
T ss_pred EecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecc--------ccc--cccccccccc---cc
Confidence 99999999999999999999999999986542221111 11111111100 000 0000000000 01
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhh-hh-hccCCCcEEEecchHHHHHHHHHHHHhhhhcC
Q 013850 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAH-QE-LVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (435)
Q Consensus 184 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-~~-~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G 261 (435)
.......++++++++|||||||.||+|.++|+++.++....... .. .....++++++.+|++|.+++. ..+.+++.|
T Consensus 161 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l~~G 239 (540)
T PRK05857 161 AGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCLMHG 239 (540)
T ss_pred ccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHhhcc
Confidence 11234567899999999999999999999999998764332110 00 1122338999999999999986 678889999
Q ss_pred cEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecC
Q 013850 262 NCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 341 (435)
Q Consensus 262 ~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~ 341 (435)
+++++. ..++..+++.++++++|++.++|+++..|++.......+++++|.+++||++++....+ +.+.++ .++++.
T Consensus 240 ~~~v~~-~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~g-~~i~~~ 316 (540)
T PRK05857 240 GLCVTG-GENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEATG-VRTAQV 316 (540)
T ss_pred eeEEec-CCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHhC-Ceeecc
Confidence 988764 56889999999999999999999999999987766667889999999999999987775 555665 999999
Q ss_pred cCcccccccccccCCCCC---CcCCCCcccccCCcEEEEEeCCCCccC-----CCCCceeEEEeCCCccccccccCCccc
Q 013850 342 YGMTETCAPISLENPLVG---VRRSGSAGTLVAGVEAQIVSVDTLKPL-----PPNQLGEIWVRGPNVTPGIVYINFFVF 413 (435)
Q Consensus 342 yG~tE~~~~~~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~~~~-----~~g~~Gei~v~g~~~~~g~~y~~~~~~ 413 (435)
||+||++........... ..+.+++|+|++|++++|+|++...++ +.|+.|||+++|++++.| ||++++.
T Consensus 317 YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~G--Y~~~~~~ 394 (540)
T PRK05857 317 YGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLG--YWNNPER 394 (540)
T ss_pred cCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhh--hhCCccc
Confidence 999998764433222111 224679999999999999996443333 347899999999999999 9999999
Q ss_pred ccccccccccCcceecCCCCC
Q 013850 414 TLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 414 ~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+.+.| .+|||+|||+++
T Consensus 395 t~~~~----~~g~~~TGDlg~ 411 (540)
T PRK05857 395 TAEVL----IDGWVNTGDLLE 411 (540)
T ss_pred hhhhc----CCCceeccceEE
Confidence 98877 367999999864
No 52
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.5e-51 Score=407.92 Aligned_cols=397 Identities=24% Similarity=0.392 Sum_probs=313.4
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
.|+.+.|.++++++|+++|++.. ++.+||.||.++++++|+.|.+. |+++||+|+++++|++++++++|||+++|++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v 101 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLI 101 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 58999999999999999999875 47999999999999999999875 9999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC----CcEEecc-CC-cccccc--------------ccccc
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL----PAVLLGS-KD-KVSSSG--------------LISRS 165 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~-~~-~~~~~~--------------~~~~~ 165 (435)
++|+++.++.+++..+++.++++++++++...+.+..... ...+... .. ...... .....
T Consensus 102 ~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK12492 102 VVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHL 181 (562)
T ss_pred EeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCC
Confidence 9999999999999999999999999998765444332211 1111000 00 000000 00001
Q ss_pred ccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhc--------cCCCcE
Q 013850 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV--------GELDHV 237 (435)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--------~~~~d~ 237 (435)
.....+++....... ....+.....+++++|+|||||||.||+|.++|+++...+.......... ....++
T Consensus 182 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (562)
T PRK12492 182 PQAVPFKQALRQGRG-LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEV 260 (562)
T ss_pred cccccHHHHHhccCC-CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeE
Confidence 122334444332211 11223345678999999999999999999999999987765544333211 111267
Q ss_pred EEecchHHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEe
Q 013850 238 VLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGS 316 (435)
Q Consensus 238 ~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~ 316 (435)
+++.+|++|.+++...++..+..|...++. ..+++..+++.++++++|++.++|+++..|.++......+++++|.+++
T Consensus 261 ~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~ 340 (562)
T PRK12492 261 MIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNS 340 (562)
T ss_pred EEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEe
Confidence 889999999999876677778888877655 4568999999999999999999999999999887666677889999999
Q ss_pred cCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEE
Q 013850 317 GAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWV 396 (435)
Q Consensus 317 gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v 396 (435)
||+++++++.+.|.+.++ +++++.||+||+++++....... ..+.+++|+|+++++++|+| +++.++++|+.|||++
T Consensus 341 gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~Gel~v 417 (562)
T PRK12492 341 GGTALVKATAERWEQLTG-CTIVEGYGLTETSPVASTNPYGE-LARLGTVGIPVPGTALKVID-DDGNELPLGERGELCI 417 (562)
T ss_pred ccccCCHHHHHHHHHHhC-CceeeccCccccCceeeecCCcc-cccCCccceecCCCEEEEEC-CCCCCCCCCCceEEEE
Confidence 999999999999999886 99999999999887665443221 33567899999999999999 4889999999999999
Q ss_pred eCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 397 RGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 397 ~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+|+.++.| ||++++.+.+.| +.++||+|||+++
T Consensus 418 ~g~~~~~g--Y~~~~~~t~~~~---~~~g~~~TGD~g~ 450 (562)
T PRK12492 418 KGPQVMKG--YWQQPEATAEAL---DAEGWFKTGDIAV 450 (562)
T ss_pred eCCccccc--cccCchhhhhcc---cCCCceecCcEEE
Confidence 99999999 999999998876 2468999999763
No 53
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-51 Score=407.22 Aligned_cols=389 Identities=30% Similarity=0.417 Sum_probs=327.6
Q ss_pred CCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 26 ~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
+.++.++|.++++.+|+++|+.+.+ ..+||+||.+.++++|+.|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 5 ~~~l~~~l~~~~~~~p~~~a~~~~~--~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~ 82 (521)
T PRK06187 5 PLTIGRILRHGARKHPDKEAVYFDG--RRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAV 82 (521)
T ss_pred cCCHHHHHHHHHHHCCCceEEEeCC--ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 3789999999999999999999874 67999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC-----CcEEeccCCcccccccccccccccchhhhhhhcCC
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (435)
++|+++.++.+++..+++.+++++++++.+..+.+..... +.+++..+.... ........+.+++....
T Consensus 83 ~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~- 156 (521)
T PRK06187 83 LHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAA-----PLAPEVGEYEELLAAAS- 156 (521)
T ss_pred EEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCcccc-----ccccccccHHHHhhcCC-
Confidence 9999999999999999999999999999887766655431 122222221100 11233455555554433
Q ss_pred CCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhc
Q 013850 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (435)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~ 260 (435)
.........++++++++|||||||.||+|.++|+++............+. .++++++.+|++|.+++. ..+.++..
T Consensus 157 -~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~-~~~~~l~~ 232 (521)
T PRK06187 157 -DTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLS--RDDVYLVIVPMFHVHAWG-LPYLALMA 232 (521)
T ss_pred -ccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCC--CCCEEEEeCCchHHhhHH-HHHHHHHh
Confidence 23334556788999999999999999999999999988776655544443 339999999999999986 44559999
Q ss_pred CcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeec
Q 013850 261 GNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (435)
Q Consensus 261 G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~ 340 (435)
|+++++.+.+++..+++.++++++|.+.++|+++..|.+........++++|.+++||++++.++.+.+.+.++ +++++
T Consensus 233 G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~-~~v~~ 311 (521)
T PRK06187 233 GAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKFG-IDLVQ 311 (521)
T ss_pred CCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhC-cchhe
Confidence 99999998889999999999999999999999999999988776778899999999999999999999999994 99999
Q ss_pred CcCcccccccccccCCCCC----CcCCCCcccccCCcEEEEEeCCCCccCCC--CCceeEEEeCCCccccccccCCcccc
Q 013850 341 GYGMTETCAPISLENPLVG----VRRSGSAGTLVAGVEAQIVSVDTLKPLPP--NQLGEIWVRGPNVTPGIVYINFFVFT 414 (435)
Q Consensus 341 ~yG~tE~~~~~~~~~~~~~----~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gei~v~g~~~~~g~~y~~~~~~~ 414 (435)
.||+||+++++........ .....++|.|+++++++|+|+ ++.+++. |+.|||+++|+.++.| |+++++.+
T Consensus 312 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~~~~--y~~~~~~~ 388 (521)
T PRK06187 312 GYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDD-DGDELPPDGGEVGEIIVRGPWLMQG--YWNRPEAT 388 (521)
T ss_pred eeccCccCcccccCCcccccccccccCCccccccCCeEEEEECC-CCCCCCCCCCCeeEEEEECcchhhh--hcCCHHHH
Confidence 9999999877666544321 126789999999999999995 6788888 9999999999999999 99999988
Q ss_pred cccccccccCcceecCCCCC
Q 013850 415 LFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 415 ~~~~~~~~~~~~~~tgD~~~ 434 (435)
.+.| .++||+|||+++
T Consensus 389 ~~~~----~~~~~~tGD~~~ 404 (521)
T PRK06187 389 AETI----DGGWLHTGDVGY 404 (521)
T ss_pred HHHh----hCCceeccceEE
Confidence 8877 356999999764
No 54
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-51 Score=408.88 Aligned_cols=392 Identities=24% Similarity=0.345 Sum_probs=318.5
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.++|.+.++++|+++|++..+.++.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 18 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 97 (558)
T PRK12583 18 QTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAIL 97 (558)
T ss_pred CcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEE
Confidence 58999999999999999999987656899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccH-----HHHhhcCCC-----------------cEEeccCCcccccccccc
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKDLNLP-----------------AVLLGSKDKVSSSGLISR 164 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 164 (435)
+|+++.++.+++..+++.++++++|+++... ..+...... ..++.... ..
T Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 169 (558)
T PRK12583 98 VNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAP--------AP 169 (558)
T ss_pred EecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecC--------CC
Confidence 9999999999999999999999999986432 111111000 00111110 01
Q ss_pred cccccchhhhhhhcCCC----CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEe
Q 013850 165 SSKIVSFHDLIELSGSV----TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLC 240 (435)
Q Consensus 165 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~ 240 (435)
......+++........ .........++++++++|||||||.||+|.++|+++...+........+.. +|++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~d~~~~ 247 (558)
T PRK12583 170 PPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTE--HDRLCV 247 (558)
T ss_pred CccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCC--CCeEEE
Confidence 11223344333222110 111123446788999999999999999999999999887666555444433 399999
Q ss_pred cchHHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCC
Q 013850 241 VLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAA 319 (435)
Q Consensus 241 ~~~l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~ 319 (435)
..|++|.+|....++.++..|+++++. ..+++..+++.++++++|++.++|+++..++........+++++|.+++||+
T Consensus 248 ~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~ 327 (558)
T PRK12583 248 PVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGA 327 (558)
T ss_pred ecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCC
Confidence 999999999988899999999999975 4678999999999999999999999999988876666677899999999999
Q ss_pred CCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCC-CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeC
Q 013850 320 PLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV-GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG 398 (435)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g 398 (435)
++++++.+++.+.++...+++.||+||++.+........ ...+..++|+|++++.++|+|++ +++++.|+.|||+++|
T Consensus 328 ~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g 406 (558)
T PRK12583 328 PCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRG 406 (558)
T ss_pred CCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEe
Confidence 999999999999998678999999999998766543221 13356789999999999999965 8999999999999999
Q ss_pred CCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 399 PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 399 ~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+.++.| |+++++.+...+ ..++||+|||+++
T Consensus 407 ~~~~~g--y~~~~~~~~~~~---~~~~~~~TGDl~~ 437 (558)
T PRK12583 407 YSVMKG--YWNNPEATAESI---DEDGWMHTGDLAT 437 (558)
T ss_pred Cccchh--hcCChHHHHhhc---CCCCCeeccceEE
Confidence 999999 999999987755 2467999999763
No 55
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=4.2e-51 Score=406.36 Aligned_cols=385 Identities=22% Similarity=0.268 Sum_probs=311.6
Q ss_pred CchHHHHHhhcccCCCceeeeecC----CCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHc
Q 013850 27 FSMVHFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~ 102 (435)
.|+.+.+.++++.+|+++|++..+ .+..+||.||.++++++|++|++.|+++||+|+++++|+++++++++||+++
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 101 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARI 101 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 689999999999999999998521 1368999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccH-----HHHhhc----C-CCcEEeccCCcccccccccccccccchh
Q 013850 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIVSFH 172 (435)
Q Consensus 103 G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (435)
|++++|+++.++.+++.++++.++++++++++... ...... . ...+++.... ....++
T Consensus 102 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 169 (538)
T TIGR03208 102 GAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGD------------GDDSFD 169 (538)
T ss_pred CEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCC------------CCcCHH
Confidence 99999999999999999999999999999987542 111111 1 1122221110 011222
Q ss_pred hhhhhcCC--CCC----CCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHH
Q 013850 173 DLIELSGS--VTD----IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFH 246 (435)
Q Consensus 173 ~~~~~~~~--~~~----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~ 246 (435)
.++..... ... .......++++++|+|||||||.||+|.++|+++...+........+. .+|++++.+|++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~--~~d~~l~~~pl~h 247 (538)
T TIGR03208 170 RVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELG--GGDVILMASPMAH 247 (538)
T ss_pred HHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCC--CCCeEEEeCCchh
Confidence 22211100 000 112345679999999999999999999999999988876655544443 3499999999999
Q ss_pred HHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHH
Q 013850 247 VFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELM 326 (435)
Q Consensus 247 ~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~ 326 (435)
..++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+..........++++|.+++||+++++++.
T Consensus 248 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~ 327 (538)
T TIGR03208 248 QTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILV 327 (538)
T ss_pred HHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHH
Confidence 99987788999999999999988999999999999999999999999999887654455678899999999999999999
Q ss_pred HHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCcccccc
Q 013850 327 EDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIV 406 (435)
Q Consensus 327 ~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~ 406 (435)
+++.+.++ +++++.||+||++.+..............++|+|+++++++|+| +++.+++.|+.|||+++|+.++.|
T Consensus 328 ~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~g-- 403 (538)
T TIGR03208 328 ERAWELLG-ALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGG-- 403 (538)
T ss_pred HHHHHHcC-CeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCccccc--
Confidence 99999986 99999999999887665433221122345789999999999999 578999999999999999999999
Q ss_pred ccCCcccccccccccccCcceecCCCCC
Q 013850 407 YINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 407 y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
||++++.+.. ..++||+|||+++
T Consensus 404 y~~~~~~~~~-----~~~~~~~TGD~~~ 426 (538)
T TIGR03208 404 YLKRPHLNST-----DAEGWFDTGDLAF 426 (538)
T ss_pred ccCCcccccc-----cCCCceeccceEE
Confidence 9999988753 2478999999863
No 56
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-51 Score=415.18 Aligned_cols=398 Identities=22% Similarity=0.271 Sum_probs=304.6
Q ss_pred Cch-HHHHHhhcccCCCceeeeecC----CCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013850 27 FSM-VHFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIA 101 (435)
Q Consensus 27 ~tl-~~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 101 (435)
.|+ .++|.++++.+|+++|++... ..+.+||+||.++++++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 52 ~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 131 (629)
T PRK10524 52 TNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACAR 131 (629)
T ss_pred eeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 555 455667788899999998632 236899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccH---------HHHhh----c--CCCcEEeccCCcccccccccccc
Q 013850 102 IGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW---------DKVKD----L--NLPAVLLGSKDKVSSSGLISRSS 166 (435)
Q Consensus 102 ~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~ 166 (435)
+|++++|+++.++.+++..+++.++++++|+++... +.+.. . ....+++...... .. .....
T Consensus 132 ~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~-~~--~~~~~ 208 (629)
T PRK10524 132 IGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLA-PM--ARVAG 208 (629)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCC-Cc--CcccC
Confidence 999999999999999999999999999999976421 11111 1 1122222211100 00 00011
Q ss_pred cccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHh-hhhhccCCCcEEEecchHH
Q 013850 167 KIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPMF 245 (435)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~d~~l~~~~l~ 245 (435)
....+.++...... ...+.....++++++|+|||||||.||+|.++|.++......... ...+ ..+|++++..+++
T Consensus 209 ~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~ 285 (629)
T PRK10524 209 RDVDYATLRAQHLG-ARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGG--KAGETFFCASDIG 285 (629)
T ss_pred CcccHHHHHhcCCC-CCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCC--CCCCEEEEcCCCC
Confidence 12334444332211 112223356789999999999999999999999997654332222 2222 3349999999999
Q ss_pred HHHHHHHHHHhhhhcCcEEEecC----CCCHHHHHHHHHhcCceEEEecHHHHHHHHhccc--ccCCCCcceeEEEecCC
Q 013850 246 HVFGLSVILYDQLQKGNCVVSMG----KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAA 319 (435)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~i~~~~----~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~i~~gG~ 319 (435)
|.++....++.++..|+++++.+ .+++..+++.++++++|++.++|++++.|.+... ....++++||.+++||+
T Consensus 286 ~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge 365 (629)
T PRK10524 286 WVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGE 365 (629)
T ss_pred eeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCC
Confidence 99887667899999999999875 3478999999999999999999999999887643 23457889999999999
Q ss_pred CCcHHHHHHHHhhCCCCeeecCcCcccccccccccCC--CCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEe
Q 013850 320 PLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENP--LVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVR 397 (435)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~ 397 (435)
++++++.+++.+.++ +++++.||+||++..+..... .....+.+++|+|++|++++|+|+++|++++.|+.|||+++
T Consensus 366 ~l~~~~~~~~~~~~~-~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~ 444 (629)
T PRK10524 366 PLDEPTASWISEALG-VPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIE 444 (629)
T ss_pred CCCHHHHHHHHHhcC-CCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEc
Confidence 999999999999997 999999999999854332222 11134568999999999999999658999999999999999
Q ss_pred CC---CccccccccCCcccccccc-cccccCcceecCCCCC
Q 013850 398 GP---NVTPGIVYINFFVFTLFLW-GCEHTDSFIRGKDQQT 434 (435)
Q Consensus 398 g~---~~~~g~~y~~~~~~~~~~~-~~~~~~~~~~tgD~~~ 434 (435)
|| +++.| ||++++.+.+.+ ..+ .++||+|||+++
T Consensus 445 gp~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~TGDl~~ 482 (629)
T PRK10524 445 GPLPPGCMQT--VWGDDDRFVKTYWSLF-GRQVYSTFDWGI 482 (629)
T ss_pred CCCChhhcCC--ccCChHHHHHhhhccC-CCcEEEcCCcEE
Confidence 98 57889 999998766543 111 457999999863
No 57
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-51 Score=407.34 Aligned_cols=389 Identities=21% Similarity=0.309 Sum_probs=306.0
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.++|.++++++|+++|+++.+..+.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 16 ~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 95 (534)
T PRK05852 16 PRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVV 95 (534)
T ss_pred ccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcEE
Confidence 68999999999999999999886545689999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC---CcEEeccCCcccccccccccccccchhhhhhhcCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL---PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (435)
+|+++.++.+++.++++.++++++|++............ ...+...... .......... ..........
T Consensus 96 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~ 167 (534)
T PRK05852 96 VPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDS-------GPSGGTLSVH-LDAATEPTPA 167 (534)
T ss_pred eecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccc-------cccccccccc-cccccCCCcc
Confidence 999999999999999999999999998653322111110 0001110000 0000000000 0000000001
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcE
Q 013850 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (435)
Q Consensus 184 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~ 263 (435)
.......+++.++|+|||||||.||+|.++|+++...+........+. .+|++++..|++|.+++...++.++..|++
T Consensus 168 ~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~ 245 (534)
T PRK05852 168 TSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLS--PRDATVAVMPLYHGHGLIAALLATLASGGA 245 (534)
T ss_pred ccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCC--CcceEEEecCcchhHHHHHHHHHHHhcCCe
Confidence 111122356789999999999999999999999988877665545443 349999999999999998789999999999
Q ss_pred EEecC--CCCHHHHHHHHHhcCceEEEecHHHHHHHHhccccc--CCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeee
Q 013850 264 VVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR--KFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIF 339 (435)
Q Consensus 264 i~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~ 339 (435)
+++.. .+++..+++.++++++|.+.++|+++..|.+..... ...++++|.+.++|+++++++.+.+.+.++ .+++
T Consensus 246 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~-~~v~ 324 (534)
T PRK05852 246 VLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEFA-APVV 324 (534)
T ss_pred EEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHhC-CChh
Confidence 99864 478999999999999999999999999998865432 345789999999999999999999999996 9999
Q ss_pred cCcCcccccccccccCCCC------CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccc
Q 013850 340 QGYGMTETCAPISLENPLV------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVF 413 (435)
Q Consensus 340 ~~yG~tE~~~~~~~~~~~~------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~ 413 (435)
+.||+||++..++...... .....+..|. .+|++++|+| ++++++++|+.|||+++|+.++.| ||++++.
T Consensus 325 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~g--Y~~~~~~ 400 (534)
T PRK05852 325 CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRG--YLGDPTI 400 (534)
T ss_pred hccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCCCCCCCceEEEEecCcccch--hcCCccc
Confidence 9999999987665432211 0112334444 7999999999 578999999999999999999999 9999999
Q ss_pred ccccccccccCcceecCCCCC
Q 013850 414 TLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 414 ~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+.+.| .++||+|||+++
T Consensus 401 t~~~~----~~g~~~TGD~~~ 417 (534)
T PRK05852 401 TAANF----TDGWLRTGDLGS 417 (534)
T ss_pred chhhh----cCCCcccCceEE
Confidence 99887 367999999763
No 58
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=5.1e-52 Score=481.99 Aligned_cols=377 Identities=21% Similarity=0.267 Sum_probs=319.1
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.++|.++++++|+++|+++.+ +.+||+||.++++++|+.|++.|+++|++|+|+++|++++++++|||+++|+++
T Consensus 3095 ~~~~~l~~~~a~~~p~~~Av~~~~--~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~ 3172 (3956)
T PRK12467 3095 RLVHQLIEAQVARTPEAPALVFGD--QQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAY 3172 (3956)
T ss_pred ccHHHHHHHHHHhCCCcceEeeCC--cccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEe
Confidence 689999999999999999999974 899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|++|.++.+++.++++.++++++|++....+.+........+.... ...... ....+.
T Consensus 3173 vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~-~~~~~~ 3231 (3956)
T PRK12467 3173 VPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDR--------------------LDLNGY-SENNPS 3231 (3956)
T ss_pred ecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecc--------------------hhhccc-CCCCCc
Confidence 99999999999999999999999999987655543221111111100 000000 022233
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....++++++|+|||||||.||||+++|+++.+.+.+......+.. +|+++...|++|..+.. .++.+|..|+++++
T Consensus 3232 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~fd~~~~-~~~~~L~~G~~l~i 3308 (3956)
T PRK12467 3232 TRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDA--NDRVLLFMSFSFDGAQE-RFLWTLICGGCLVV 3308 (3956)
T ss_pred ccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCc--CCEEEEecCccHhHHHH-HHHHHHhCCCEEEE
Confidence 4567899999999999999999999999999998877666655543 39999999999998874 88999999999999
Q ss_pred cCC--CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCc
Q 013850 267 MGK--FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGM 344 (435)
Q Consensus 267 ~~~--~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~ 344 (435)
.+. +++..+++.++++++|++.++|+++..|++... ..++++||.+++|||++++++.++|++.+++++++|.||+
T Consensus 3309 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~ 3386 (3956)
T PRK12467 3309 RDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGP 3386 (3956)
T ss_pred CCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCccc
Confidence 875 689999999999999999999999999987542 3467899999999999999999999999988999999999
Q ss_pred ccccccccccCCCCC---CcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccc---
Q 013850 345 TETCAPISLENPLVG---VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW--- 418 (435)
Q Consensus 345 tE~~~~~~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~--- 418 (435)
||++..++....... .....++|+|++|++++|+| +++++++.|++|||+|+|++++.| ||++|+.|.++|
T Consensus 3387 TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~G--Y~~~~~~T~~~F~~~ 3463 (3956)
T PRK12467 3387 TEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARG--YHQRPSLTAERFVAD 3463 (3956)
T ss_pred chhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhh--ccCCcccchhhccCC
Confidence 999876654322211 22346899999999999999 689999999999999999999999 999999999998
Q ss_pred cc-cccCcceecCCCCC
Q 013850 419 GC-EHTDSFIRGKDQQT 434 (435)
Q Consensus 419 ~~-~~~~~~~~tgD~~~ 434 (435)
+| ...++||||||+++
T Consensus 3464 p~~~~g~r~yrTGDl~~ 3480 (3956)
T PRK12467 3464 PFSGSGGRLYRTGDLAR 3480 (3956)
T ss_pred CCCCCCceeeccchhhe
Confidence 33 23456999999985
No 59
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-51 Score=415.22 Aligned_cols=381 Identities=22% Similarity=0.314 Sum_probs=293.5
Q ss_pred CchHHHHHhhcccCCCceeeeecC-----CC--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013850 27 FSMVHFLFRNSASYSSKLALIDAD-----SD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~-----~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 99 (435)
.|+.+++.++++++|+++|++..+ .+ +.+||.||.++++++|++|.+. +++||+|+++++|++++++++|||
T Consensus 34 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~ 112 (612)
T PRK12476 34 TTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAA 112 (612)
T ss_pred CcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHH
Confidence 799999999999999999998642 12 4899999999999999999886 999999999999999999999999
Q ss_pred HHcCcEEEec-CCCCC--HHHHHHHHHhcCCeEEEEccccHHHHhhcCC-------CcEEeccCCccccccccccccccc
Q 013850 100 IAIGAIASTA-NPVYT--VSELSKQVKDSNPKLVITVPELWDKVKDLNL-------PAVLLGSKDKVSSSGLISRSSKIV 169 (435)
Q Consensus 100 ~~~G~~~v~i-~~~~~--~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
+++|++++|+ ++.++ .+++.++++.++++++|+++...+.+..... ..++.. +.
T Consensus 113 ~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~--------------- 176 (612)
T PRK12476 113 IKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAI-DA--------------- 176 (612)
T ss_pred HHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEe-cc---------------
Confidence 9999999999 57766 7899999999999999999876655433210 111111 10
Q ss_pred chhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHH
Q 013850 170 SFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFG 249 (435)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g 249 (435)
+..... .........++++++|+|||||||.||||.++|+++.+.+......... ...++++++.+|++|.+|
T Consensus 177 ----~~~~~~--~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~~~~~~l~~~Pl~h~~g 249 (612)
T PRK12476 177 ----IPDSAG--ESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDL-LDRNTHGVSWLPLYHDMG 249 (612)
T ss_pred ----cccccc--ccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhcc-CCCCceEEEeCCcccccc
Confidence 000000 1111233467899999999999999999999999998775554433331 123489999999999999
Q ss_pred HHHHHHhhhhcCcEEEecC-CC--CHHHHHHHHH--hcCceEEEecHHHHHHHHhccc----ccCCCCcceeEEEecCCC
Q 013850 250 LSVILYDQLQKGNCVVSMG-KF--DIEMALRAIE--KYRVTVWWVVPPIILALAKNSL----VRKFDISSLKLVGSGAAP 320 (435)
Q Consensus 250 ~~~~~~~~l~~G~~i~~~~-~~--~~~~~~~~l~--~~~~t~~~~~P~~~~~l~~~~~----~~~~~l~~lr~i~~gG~~ 320 (435)
+...++.++..|.++++.+ .+ ++..+++.++ +++++.+..+|+++..++.... ....++++|| +++||++
T Consensus 250 ~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~ 328 (612)
T PRK12476 250 LSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEP 328 (612)
T ss_pred hHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccC
Confidence 9644455555554444443 23 8899999995 4899999999999888776421 1244688999 9999999
Q ss_pred CcHHHHHHHHhhCC-----CCeeecCcCcccccccccccCCCCC-------------------------CcCCCCccccc
Q 013850 321 LGKELMEDCQKNIP-----GATIFQGYGMTETCAPISLENPLVG-------------------------VRRSGSAGTLV 370 (435)
Q Consensus 321 l~~~~~~~~~~~~~-----~~~~~~~yG~tE~~~~~~~~~~~~~-------------------------~~~~~~~G~~~ 370 (435)
+++++.++|++.|+ ..++++.||+||++..++...+... ..+.+++|+|+
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~ 408 (612)
T PRK12476 329 VSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVA 408 (612)
T ss_pred CCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcC
Confidence 99999999999873 2459999999998765543322110 01235789999
Q ss_pred CCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc-----cc-c---------cCcceecCCCCC
Q 013850 371 AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG-----CE-H---------TDSFIRGKDQQT 434 (435)
Q Consensus 371 ~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~-----~~-~---------~~~~~~tgD~~~ 434 (435)
+|++++|+|++++++++.|+.|||+++|++++.| ||++++.|.+.|. .. + .++||+|||++.
T Consensus 409 ~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~G--Y~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~ 485 (612)
T PRK12476 409 RSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRG--YWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGV 485 (612)
T ss_pred CCCEEEEEeCCCCcCCCCCCEEEEEEcCCccccc--ccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccce
Confidence 9999999997659999999999999999999999 9999999988772 00 0 235999999985
No 60
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.9e-50 Score=401.37 Aligned_cols=381 Identities=24% Similarity=0.360 Sum_probs=312.3
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.++|.++++.+|+++|+++. ++.+||.||.+++.++|..|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 21 ~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~ 98 (542)
T PRK06155 21 RTLPAMLARQAERYPDRPLLVFG--GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIA 98 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEE
Confidence 78999999999999999999987 4899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC-----CcEEeccCCcccccccccccccccchhhhhhhcCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (435)
+|+++.++.+++..+++.+++++++++.+....+..... ...+...... .. .....+ ...++... .
T Consensus 99 vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~-~~~~~~~~-~-- 169 (542)
T PRK06155 99 VPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPA-SV----SVPAGW-STAPLPPL-D-- 169 (542)
T ss_pred EEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCcc-cc----cccccc-chhhhccc-C--
Confidence 999999999999999999999999999887766654321 1122111100 00 000000 00011100 0
Q ss_pred CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcC
Q 013850 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (435)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G 261 (435)
.........++++++|+|||||||.||+|.++|+++............+. ..+++++..|++|..++. .++.++..|
T Consensus 170 ~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~--~~~~~l~~~pl~~~~~~~-~~~~~l~~G 246 (542)
T PRK06155 170 APAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIG--ADDVLYTTLPLFHTNALN-AFFQALLAG 246 (542)
T ss_pred CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCC--CCCEEEEecCHHHHHHHH-HHHHHHHcC
Confidence 11122345678999999999999999999999999987755544444443 339999999999999995 678999999
Q ss_pred cEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecC
Q 013850 262 NCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 341 (435)
Q Consensus 262 ~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~ 341 (435)
+++++.+.+++..+++.|+++++|++.++|+++..|.+.........+++|.++.|| +++.+.+.+++.++ .++++.
T Consensus 247 ~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~~-~~v~~~ 323 (542)
T PRK06155 247 ATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERFG-VDLLDG 323 (542)
T ss_pred ceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHcC-CCEEee
Confidence 999999999999999999999999999999999999987766666778899887666 57899999999996 999999
Q ss_pred cCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCC---CccccccccCCcccccccc
Q 013850 342 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP---NVTPGIVYINFFVFTLFLW 418 (435)
Q Consensus 342 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~---~~~~g~~y~~~~~~~~~~~ 418 (435)
||+||++.++.... . ..+.+++|.+.++++++|+| +++++++.|+.|||+++|+ +++.| |+++++.+.+.|
T Consensus 324 YG~tE~~~~~~~~~-~--~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~G--Y~~~~~~~~~~~ 397 (542)
T PRK06155 324 YGSTETNFVIAVTH-G--SQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATG--YFGMPEKTVEAW 397 (542)
T ss_pred ecccccCccccCCC-C--CCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchh--hcCCHHHHHHhh
Confidence 99999987765432 2 34678899999999999999 5799999999999999998 69999 999999988876
Q ss_pred cccccCcceecCCCCC
Q 013850 419 GCEHTDSFIRGKDQQT 434 (435)
Q Consensus 419 ~~~~~~~~~~tgD~~~ 434 (435)
.++||+|||+++
T Consensus 398 ----~~~~~~TGD~~~ 409 (542)
T PRK06155 398 ----RNLWFHTGDRVV 409 (542)
T ss_pred ----cCCcEeccceEE
Confidence 367888888763
No 61
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.5e-51 Score=399.77 Aligned_cols=366 Identities=21% Similarity=0.351 Sum_probs=299.6
Q ss_pred HhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCC
Q 013850 34 FRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY 113 (435)
Q Consensus 34 ~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~ 113 (435)
..+++.+|+++|+.+...+..+||.||.+.++++|+.|++.|+++||+|+++++|++++++++|||+++|++++|+++..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 45678899999998754468999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCCCCCCCC
Q 013850 114 TVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTD 193 (435)
Q Consensus 114 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (435)
+.+++..+++.++++++|+++...... .. ...++++................+++
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~~------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAGR------TD-------------------VEDLAAFIASADALEPADTPSIPPER 136 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhccc------cc-------------------ccchhhhhhhccccccccCCCCCCCC
Confidence 999999999999999999986543210 00 01111111111100111123345688
Q ss_pred EEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHH
Q 013850 194 AAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIE 273 (435)
Q Consensus 194 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~ 273 (435)
+++++|||||||.||+|.++|+++...+......... ..+|++++.+|++|.+++...+..++..|+++++.+.+++.
T Consensus 137 ~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~--~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~ 214 (488)
T PRK09088 137 VSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRV--DAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPK 214 (488)
T ss_pred ceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCC--CCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHH
Confidence 9999999999999999999999998776554443333 33499999999999999987788999999999999888999
Q ss_pred HHHHHHHh--cCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccc
Q 013850 274 MALRAIEK--YRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPI 351 (435)
Q Consensus 274 ~~~~~l~~--~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~ 351 (435)
..+..+.+ +++|++.++|.++..|.+........+++||.+++||++++.+..+.+.+. ++++++.||+||++.+.
T Consensus 215 ~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~ 292 (488)
T PRK09088 215 RTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVF 292 (488)
T ss_pred HHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeeccccccccc
Confidence 99998864 789999999999999988765555678899999999999999998888765 59999999999998755
Q ss_pred cccCC-CCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecC
Q 013850 352 SLENP-LVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGK 430 (435)
Q Consensus 352 ~~~~~-~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tg 430 (435)
..... .....+.+++|.|+++++++|+| +++..++.|+.|||+++|++++.| |+++++.+.+.+ +.++||+||
T Consensus 293 ~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~g--Y~~~~~~~~~~~---~~~g~~~TG 366 (488)
T PRK09088 293 GMSVDCDVIRAKAGAAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPG--YWRRPQATARAF---TGDGWFRTG 366 (488)
T ss_pred ccCCCcccccccCCccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchh--hcCChhhhhhhh---cCCCCeeec
Confidence 33211 11133567899999999999999 578999999999999999999999 999999988765 346899999
Q ss_pred CCCC
Q 013850 431 DQQT 434 (435)
Q Consensus 431 D~~~ 434 (435)
|+++
T Consensus 367 Dl~~ 370 (488)
T PRK09088 367 DIAR 370 (488)
T ss_pred ceEE
Confidence 9764
No 62
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.9e-50 Score=400.19 Aligned_cols=390 Identities=24% Similarity=0.342 Sum_probs=316.5
Q ss_pred chHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEE
Q 013850 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (435)
Q Consensus 28 tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 107 (435)
++.+.|.+.++++|+++|+.+. ++.+||+||.+++.++|+.|++.|+.+||+|+++++|++++++++|||+++|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v 78 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH--DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFV 78 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEE
Confidence 4678899999999999999987 47999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCC-----cEEeccCCcccccccccccccccchhhhhhhcCCCC
Q 013850 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP-----AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT 182 (435)
Q Consensus 108 ~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (435)
|+++.++.+++..+++.++++++++++.....+...... .++...+.... .........|+++.....
T Consensus 79 ~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--- 151 (515)
T TIGR03098 79 PINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHA----SEGGGESPSWPKLLALGD--- 151 (515)
T ss_pred eCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccc----cCCccccccHHHhhcccc---
Confidence 999999999999999999999999998766554332211 12111111000 011122334555443322
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCc
Q 013850 183 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (435)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~ 262 (435)
.........+++++|+|||||||.||+|.+||+++...+........+ ..+|++++.+|++|.+++. .++.++..|+
T Consensus 152 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~ 228 (515)
T TIGR03098 152 ADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLEN--RPDDRLLAVLPLSFDYGFN-QLTTAFYVGA 228 (515)
T ss_pred ccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCC--CcccEEEEECchhhHhHHH-HHHHHHHcCC
Confidence 112233456889999999999999999999999998877665544433 3349999999999999985 7899999999
Q ss_pred EEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCc
Q 013850 263 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 342 (435)
Q Consensus 263 ~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~y 342 (435)
++++.+.+++..+++.++++++|++.++|+++..|.+... ....++++|.+++||+++++++.+.+++.+++..+++.|
T Consensus 229 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~Y 307 (515)
T TIGR03098 229 TVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMY 307 (515)
T ss_pred EEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeee
Confidence 9999988999999999999999999999999999987532 224678999999999999999999999999779999999
Q ss_pred CcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc---
Q 013850 343 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG--- 419 (435)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~--- 419 (435)
|+||++...... ......+++++|+|+++++++|+| +++++++.|+.|||+++|+.++.| ||++++.+...+.
T Consensus 308 G~tE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~g--y~~~~~~~~~~~~~~~ 383 (515)
T TIGR03098 308 GLTEAFRSTYLP-PEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMG--YWNDPEKTAERFRPLP 383 (515)
T ss_pred ccccccceEecc-cccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhcc--ccCCchhhhhhhhccC
Confidence 999987644332 222245678999999999999999 588999999999999999999999 9999998876551
Q ss_pred ----c-cccCcceecCCCCC
Q 013850 420 ----C-EHTDSFIRGKDQQT 434 (435)
Q Consensus 420 ----~-~~~~~~~~tgD~~~ 434 (435)
+ ...++||+|||+++
T Consensus 384 ~~~~~~~~~~~~~~TGD~~~ 403 (515)
T TIGR03098 384 PRPGELHLPELAVWSGDTVR 403 (515)
T ss_pred CccccccccccceeccceEE
Confidence 1 11235899999763
No 63
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9e-52 Score=375.47 Aligned_cols=418 Identities=22% Similarity=0.303 Sum_probs=334.6
Q ss_pred CccceeecCC---CCCCCCCCCCCchHHHHHhhcccCCCceeeeecC----------CC-----------cceeHHHHHH
Q 013850 7 GRDGIYRSLR---PPLVLPSDPSFSMVHFLFRNSASYSSKLALIDAD----------SD-----------ESLSFSQFKS 62 (435)
Q Consensus 7 ~~~~~~~~~~---~~~~~~~~~~~tl~~~l~~~~~~~p~~~a~~~~~----------~~-----------~~~Ty~el~~ 62 (435)
.+...+|+-. +-...|.+.-.|+.+++.+.++++.++.++-..+ +| .++||.|+.+
T Consensus 18 ~e~~p~Rnv~~~~~L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~ 97 (678)
T KOG1180|consen 18 HETAPYRNVRSFDGLVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYE 97 (678)
T ss_pred CCCccccccccCCCccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHH
Confidence 3444455432 3344455555999999999999999999983211 11 6889999999
Q ss_pred HHHHHHHHHHhCCCCCCCE-EEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 63 IVIKVSHSFRHLGITKKDV-VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 63 ~~~~la~~L~~~g~~~gd~-V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
++..+|+.|.+.|++++++ |+|+++.+.+|+.+++||++.+..+|.+-..+..+.+.+-|.+++++.+||+.+..+.+.
T Consensus 98 ~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~ 177 (678)
T KOG1180|consen 98 RVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLK 177 (678)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHH
Confidence 9999999999999997776 999999999999999999999999999999999999999999999999999999988776
Q ss_pred hcC-----CCcEEeccCCccc----ccc-cccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCcccee
Q 013850 142 DLN-----LPAVLLGSKDKVS----SSG-LISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVI 211 (435)
Q Consensus 142 ~~~-----~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 211 (435)
... .+.++.....+.. +.. .......+.+|+++++.+.... .++....|+|+|+|+|||||||.||||+
T Consensus 178 ~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~-~~~~~P~p~Dia~IMYTSGSTG~PKGVm 256 (678)
T KOG1180|consen 178 APLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE-IPPHPPKPSDIACIMYTSGSTGLPKGVM 256 (678)
T ss_pred HHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC-CCCCCCCCCceEEEEEcCCCCCCCceEE
Confidence 553 3445544421111 111 1234567899999998887533 4555568999999999999999999999
Q ss_pred eccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCC--------HHHHHHHHHhcC
Q 013850 212 LTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD--------IEMALRAIEKYR 283 (435)
Q Consensus 212 ~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~--------~~~~~~~l~~~~ 283 (435)
++|+|+++.+........ .-...|+++.++|+.|++.+. .-+.+++.|+.+-..+... ....--.+...|
T Consensus 257 l~H~NiVA~~~G~~~~v~-~lg~~D~yi~yLPLAHIlEl~-aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lk 334 (678)
T KOG1180|consen 257 LTHSNIVAGVTGVGENVP-ELGPKDRYIAYLPLAHILELT-AELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELK 334 (678)
T ss_pred EecccHHhhhhhhcccCc-ccCCCceEEEechHHHHHHHH-HHHHHHhhCCEeecCCcceecccchhhccCCcCcccccc
Confidence 999999999877665553 223339999999999999995 7788999999998775421 122233566789
Q ss_pred ceEEEecHHHHHHHHhcccc------------------------c--C----------------CCCcceeEEEecCCCC
Q 013850 284 VTVWWVVPPIILALAKNSLV------------------------R--K----------------FDISSLKLVGSGAAPL 321 (435)
Q Consensus 284 ~t~~~~~P~~~~~l~~~~~~------------------------~--~----------------~~l~~lr~i~~gG~~l 321 (435)
||+|.++|.+|.++.+.... + . ..-..||.+++||+|+
T Consensus 335 PTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapL 414 (678)
T KOG1180|consen 335 PTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPL 414 (678)
T ss_pred chhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCC
Confidence 99999999998877553000 0 0 0014899999999999
Q ss_pred cHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCC--ceeEEEeCC
Q 013850 322 GKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQ--LGEIWVRGP 399 (435)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~--~Gei~v~g~ 399 (435)
+++..+.+...+. +++.++||.||+++..+...+. +...+.+|.|++.++++++|.+++--...+. .|||+++|+
T Consensus 415 S~dtQrF~nic~C-~Pv~qGYGLTEtca~~tv~e~~--d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~ 491 (678)
T KOG1180|consen 415 SPDTQRFMNICFC-CPVLQGYGLTETCAAATVLEPE--DFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGP 491 (678)
T ss_pred CHHHHHHHHHhcc-ccccccccccchhcccEecChh--hcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCC
Confidence 9999999999987 8999999999999999988887 6778899999999999999976665544444 899999999
Q ss_pred CccccccccCCcccccccccccccCc--ceecCCCCC
Q 013850 400 NVTPGIVYINFFVFTLFLWGCEHTDS--FIRGKDQQT 434 (435)
Q Consensus 400 ~~~~g~~y~~~~~~~~~~~~~~~~~~--~~~tgD~~~ 434 (435)
++..| ||++++.|++.|.. .+| ||+|||+++
T Consensus 492 ~vt~g--Y~kn~ekT~e~ft~--~~G~~WF~TGDIGe 524 (678)
T KOG1180|consen 492 NVTMG--YYKNEEKTKEDFTV--EDGQRWFRTGDIGE 524 (678)
T ss_pred ccChh--hhCChhhhhhhcee--cCCcEEEeccccce
Confidence 99999 99999999999954 355 999999985
No 64
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-50 Score=402.56 Aligned_cols=417 Identities=23% Similarity=0.320 Sum_probs=322.4
Q ss_pred CccceeecCCCCC-CCCCCCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 013850 7 GRDGIYRSLRPPL-VLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIF 85 (435)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~ 85 (435)
..+++|-+..++. .+|.. ..++.+.|.++++.+|+++|+.+. ++.+||.||.+++.++|+.|.+.|+++||+|+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~a~~~p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~ 89 (567)
T PRK06178 13 LQQAAWPAGIPREPEYPHG-ERPLTEYLRAWARERPQRPAIIFY--GHVITYAELDELSDRFAALLRQRGVGAGDRVAVF 89 (567)
T ss_pred hHHhhCCcCCCCCCCCCcC-cccHHHHHHHHHHHCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 4556666555554 33333 368999999999999999999886 4899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CCcEEecc-CCcccccc
Q 013850 86 APNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGS-KDKVSSSG 160 (435)
Q Consensus 86 ~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~ 160 (435)
++|+++++++++||+++|++++|++|..+.+++.++++.++++++++++...+.+.... ...+++.. .+......
T Consensus 90 ~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 169 (567)
T PRK06178 90 LPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEP 169 (567)
T ss_pred CCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccc
Confidence 99999999999999999999999999999999999999999999999988777665432 11222111 10000000
Q ss_pred ccccc-------ccccchhhhhhhcCC-CCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc
Q 013850 161 LISRS-------SKIVSFHDLIELSGS-VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG 232 (435)
Q Consensus 161 ~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~ 232 (435)
..... .....+.++.+.... ..........++++++|+|||||||.||+|.+||.++........... ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~ 248 (567)
T PRK06178 170 TLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA-VVG 248 (567)
T ss_pred ccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh-ccC
Confidence 00000 000111122221110 011123345689999999999999999999999999887654433221 222
Q ss_pred CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCccee
Q 013850 233 ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLK 312 (435)
Q Consensus 233 ~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr 312 (435)
..++++++.+|++|++|+...++.++..|+++++.+.+++..+++.++++++|.+.++|..+..|.+.......+++++|
T Consensus 249 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~ 328 (567)
T PRK06178 249 GEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLR 328 (567)
T ss_pred CCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchhe
Confidence 33499999999999999876788899999999999999999999999999999999999999999887655566778888
Q ss_pred EEEe--cCCCCcHHHHHHHHhhCCCCeee-cCcCcccccccccccCCCC-----CCcCCCCcccccCCcEEEEEeCCCCc
Q 013850 313 LVGS--GAAPLGKELMEDCQKNIPGATIF-QGYGMTETCAPISLENPLV-----GVRRSGSAGTLVAGVEAQIVSVDTLK 384 (435)
Q Consensus 313 ~i~~--gG~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~-----~~~~~~~~G~~~~~~~~~i~d~~~~~ 384 (435)
.+.. .++++++++.+.|++.++ ..++ +.||+||++.......... ...+++++|+|++|++++|+|+++++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~ 407 (567)
T PRK06178 329 QVRVVSFVKKLNPDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGE 407 (567)
T ss_pred eeeeccccccCCHHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCC
Confidence 8644 458999999999999997 5555 5799999886654432111 12345789999999999999988899
Q ss_pred cCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 385 PLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 385 ~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+++.|++|||+++|++++.| ||++++.+.+.+ .+|||+|||++.
T Consensus 408 ~~~~g~~Gel~v~g~~v~~g--Y~~~~~~~~~~~----~dg~~~TGDl~~ 451 (567)
T PRK06178 408 LLPLGAEGEIVVRTPSLLKG--YWNKPEATAEAL----RDGWLHTGDIGK 451 (567)
T ss_pred cCCCCCceEEEEECCccccc--ccCChhhhhhcc----cCCceeecceEE
Confidence 99999999999999999999 999999988876 356888888753
No 65
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=6.1e-51 Score=443.95 Aligned_cols=376 Identities=20% Similarity=0.285 Sum_probs=313.4
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.++|.++++.+|+++|+++. +..+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 458 ~~l~~~~~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~ 535 (1296)
T PRK10252 458 TTLSALVAQQAAKTPDAPALADA--RYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAW 535 (1296)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 68999999999999999999987 4899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|++|.++.+++..+++.+++++++++......+..... ..+. .+....... ...+.
T Consensus 536 vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~~---~~~~~ 592 (1296)
T PRK10252 536 LPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPD-LTSL-------------------CYNAPLAPQ---GAAPL 592 (1296)
T ss_pred EecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCC-ceee-------------------ecccccccc---cCCCC
Confidence 999999999999999999999999999876655433210 0000 011111000 11112
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....++++++|+|||||||.||||.++|+++.+.+.+......+... |++++..|++|..+++ .++.+|..|+++++
T Consensus 593 ~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~--d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~~ 669 (1296)
T PRK10252 593 QLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTAD--DVVLQKTPCSFDVSVW-EFFWPFIAGAKLVM 669 (1296)
T ss_pred CCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCC--CEEEEeCCcchhhhHH-HHHHHHhCCCEEEE
Confidence 23367899999999999999999999999999887776655555433 9999999999999885 88999999999999
Q ss_pred cC---CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccC--CCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecC
Q 013850 267 MG---KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 341 (435)
Q Consensus 267 ~~---~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~ 341 (435)
.+ ..++..+++.++++++|++.++|+++..+++...... ..++++|.+++||+++++++.+.|.+.++ ++++|.
T Consensus 670 ~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~-~~l~n~ 748 (1296)
T PRK10252 670 AEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLTG-APLHNL 748 (1296)
T ss_pred CChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcCC-CEEEeC
Confidence 85 3589999999999999999999999999987643322 34689999999999999999999999885 999999
Q ss_pred cCcccccccccccCCCCC-----CcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccc
Q 013850 342 YGMTETCAPISLENPLVG-----VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLF 416 (435)
Q Consensus 342 yG~tE~~~~~~~~~~~~~-----~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~ 416 (435)
||+||++..++....... .....++|+|+++++++|+| +++++++.|+.|||+++|++++.| |+++++.|.+
T Consensus 749 YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~G--Y~~~~~~t~~ 825 (1296)
T PRK10252 749 YGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQG--YLGRPDLTAS 825 (1296)
T ss_pred CCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchh--hCCCcccchh
Confidence 999998876554322211 22346799999999999999 699999999999999999999999 9999999999
Q ss_pred cc---cccccCcceecCCCCC
Q 013850 417 LW---GCEHTDSFIRGKDQQT 434 (435)
Q Consensus 417 ~~---~~~~~~~~~~tgD~~~ 434 (435)
.| .+...++||+|||+++
T Consensus 826 ~f~~~~~~~~~~~y~TGDl~~ 846 (1296)
T PRK10252 826 RFIADPFAPGERMYRTGDVAR 846 (1296)
T ss_pred hcccCCCCCCCEEEecCceEE
Confidence 88 2223456999999874
No 66
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-50 Score=409.84 Aligned_cols=394 Identities=20% Similarity=0.231 Sum_probs=300.3
Q ss_pred CchHHHHHhhcccCCCceeeeecCC---CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcC
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADS---DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 103 (435)
.|+.+.+.++ .+|+++|++..+. .+.+||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++|
T Consensus 86 ~n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~G 163 (655)
T PRK03584 86 LNYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLG 163 (655)
T ss_pred eeHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 6888877764 6899999986532 2689999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCCeEEEEccccH---------HHHhhc----C-CCcEEeccCCccccccccccccccc
Q 013850 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELW---------DKVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIV 169 (435)
Q Consensus 104 ~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
++++|+++.++.+++..+++.++++++|+++... +.+... . .+.+++........ .........
T Consensus 164 av~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~ 241 (655)
T PRK03584 164 AIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAA--AAAALPGAL 241 (655)
T ss_pred cEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcc--cccccCCcc
Confidence 9999999999999999999999999999987532 111111 1 11222211100000 001112234
Q ss_pred chhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHH-HHHHHhhhhhccCCCcEEEecchHHHHH
Q 013850 170 SFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAA-SLMISAHQELVGELDHVVLCVLPMFHVF 248 (435)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~~~d~~l~~~~l~~~~ 248 (435)
.|++++..... .........++++++|+|||||||.||||+++|++++.. .........+ ..+|++++..++.|+.
T Consensus 242 ~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~ 318 (655)
T PRK03584 242 LWEDFLAPAEA-AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDL--GPGDRFFWYTTCGWMM 318 (655)
T ss_pred cHHHHhhcccc-CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCC--CCCCEEEEcCCchHHh
Confidence 55555542211 222334567799999999999999999999999987644 2222222333 3349999999999876
Q ss_pred HHHHHHHhhhhcCcEEEecCC----CCHHHHHHHHHhcCceEEEecHHHHHHHHhccc--ccCCCCcceeEEEecCCCCc
Q 013850 249 GLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLG 322 (435)
Q Consensus 249 g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~i~~gG~~l~ 322 (435)
.. .++.+|..|+++++.+. +++..+++.++++++|++.++|+++..|.+... ....++++||.+++||++++
T Consensus 319 ~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~ 396 (655)
T PRK03584 319 WN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLP 396 (655)
T ss_pred HH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCC
Confidence 53 46789999999998752 479999999999999999999999999987532 23457899999999999999
Q ss_pred HHHHHHHHhhCC-CCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCC--
Q 013850 323 KELMEDCQKNIP-GATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP-- 399 (435)
Q Consensus 323 ~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~-- 399 (435)
+++.+++.+.++ +..+++.||+||+++......+.. ..+.+++|.|.+|++++|+| ++|+++ .|+.|||+++||
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~-~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~v~gp~p 473 (655)
T PRK03584 397 PEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLL-PVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELVCTKPFP 473 (655)
T ss_pred HHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCC-CcCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEEEccCCC
Confidence 999999999984 589999999999865443332221 34568899999999999999 578888 899999999996
Q ss_pred CccccccccCCcccccccccccc-cCcceecCCCCC
Q 013850 400 NVTPGIVYINFFVFTLFLWGCEH-TDSFIRGKDQQT 434 (435)
Q Consensus 400 ~~~~g~~y~~~~~~~~~~~~~~~-~~~~~~tgD~~~ 434 (435)
+++.| ||++++.++....++. .+|||+|||+++
T Consensus 474 ~~~~g--y~~~~~~~~~~~~~~~~~~g~~~TGDl~~ 507 (655)
T PRK03584 474 SMPLG--FWNDPDGSRYRDAYFDTFPGVWRHGDWIE 507 (655)
T ss_pred CCcce--eeCCCccchHHHhhhccCCCEeecCCeEE
Confidence 79999 9999986542222332 256888999874
No 67
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.6e-50 Score=401.42 Aligned_cols=400 Identities=26% Similarity=0.387 Sum_probs=316.3
Q ss_pred CCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcC
Q 013850 24 DPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (435)
Q Consensus 24 ~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 103 (435)
.+..++.+.|.++++++|+++|+++. +..+||.||.+.++++|+.|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 20 ~~~~~i~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G 97 (557)
T PRK07059 20 SQYPSLADLLEESFRQYADRPAFICM--GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAG 97 (557)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEc--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 33468999999999999999999986 4899999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CCcEEeccCCccccc-c--------------cccc
Q 013850 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSS-G--------------LISR 164 (435)
Q Consensus 104 ~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~--------------~~~~ 164 (435)
++++|++|.++.+++.++++.++++++++++...+.+.... .+.+++......... . ....
T Consensus 98 ~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (557)
T PRK07059 98 YVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWS 177 (557)
T ss_pred eEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccccccccccccccccccccC
Confidence 99999999999999999999999999999887655443321 122222111000000 0 0000
Q ss_pred cccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh--c-c--CCCcEEE
Q 013850 165 SSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL--V-G--ELDHVVL 239 (435)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~--~-~--~~~d~~l 239 (435)
......+++.+..... .........++++++|+|||||||.||+|.++|.++...+......... . . .....++
T Consensus 178 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (557)
T PRK07059 178 LPGHVRFNDALAEGAR-QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFV 256 (557)
T ss_pred CCCcccHHHHhhccCC-CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEE
Confidence 1122334444433221 2223445678999999999999999999999999998764432221111 1 1 1125788
Q ss_pred ecchHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecC
Q 013850 240 CVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGA 318 (435)
Q Consensus 240 ~~~~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG 318 (435)
+.+|++|.+++....+.++..|++.++.+ ..++..+++.++++++|.+.++|.++..|.+.......+++++|.++.||
T Consensus 257 ~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg 336 (557)
T PRK07059 257 CALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGG 336 (557)
T ss_pred EeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEecc
Confidence 89999999988667778888888877664 45889999999999999999999999999988766667788999999999
Q ss_pred CCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeC
Q 013850 319 APLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG 398 (435)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g 398 (435)
+++++.+.++|.+.++ +++++.||+||++.++...... ....+.++|.|+++++++|+| +++++++.|+.|||+++|
T Consensus 337 ~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Gel~v~g 413 (557)
T PRK07059 337 MAVQRPVAERWLEMTG-CPITEGYGLSETSPVATCNPVD-ATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGEICIRG 413 (557)
T ss_pred ccCCHHHHHHHHHHhC-CCeeeccccccccchhhcCCCC-CCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceEEEEeC
Confidence 9999999999999886 9999999999998776554322 233467899999999999999 688999999999999999
Q ss_pred CCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 399 PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 399 ~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+.++.| ||++++.+.+.+ ..+|||+|||++.
T Consensus 414 ~~~~~g--Y~~~~~~~~~~~---~~~g~~~TGDl~~ 444 (557)
T PRK07059 414 PQVMAG--YWNRPDETAKVM---TADGFFRTGDVGV 444 (557)
T ss_pred Cccchh--hhcCHHHHhhhc---ccCCceecCcEEE
Confidence 999999 999999988765 3568999999753
No 68
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=3.7e-50 Score=398.12 Aligned_cols=388 Identities=24% Similarity=0.295 Sum_probs=313.4
Q ss_pred CchHHHHHhhcccCCCceeeeecCC---CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcC
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADS---DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 103 (435)
.|+.++|.+.++++|+++|++..+. .+.+||.||.++++++|+.|.++|+++||+|+++++|+++++++++||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 6899999999999999999987542 2689999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC------CCcEEeccCCcccccccccccccccchhhhhhh
Q 013850 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIEL 177 (435)
Q Consensus 104 ~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (435)
++++|+++..+.+++..+++.++++.++++++..+.+.+.. .+.+++..... .......++++....
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 159 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVAL-------PADDGVSSFTQLKAQ 159 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCC-------cccccccCHHHHhcc
Confidence 99999999999999999999999999999988776655432 12222221110 111223344444332
Q ss_pred cCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhh
Q 013850 178 SGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQ 257 (435)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~ 257 (435)
... .........++++++|+|||||||.||+|.++|.++........... ....++++++.+|++|..+....++.+
T Consensus 160 ~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~ 236 (517)
T PRK08008 160 QPA-TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC--ALRDDDVYLTVMPAFHIDCQCTAAMAA 236 (517)
T ss_pred CCc-cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc--CCCCCCeEEEecCcHHHHHHHHHHHHH
Confidence 221 11122345678999999999999999999999999976532221111 123349999999999998887788999
Q ss_pred hhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCe
Q 013850 258 LQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGAT 337 (435)
Q Consensus 258 l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~ 337 (435)
+..|+++++.+.+++..+++.++++++|++.++|.+++.+...........+++|.+..++ ++++++...|.+.++ ++
T Consensus 237 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~ 314 (517)
T PRK08008 237 FSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERFG-VR 314 (517)
T ss_pred HhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHhC-Ce
Confidence 9999999999999999999999999999999999999999876554444556788877754 788999999999886 99
Q ss_pred eecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeC---CCccccccccCCcccc
Q 013850 338 IFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG---PNVTPGIVYINFFVFT 414 (435)
Q Consensus 338 ~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g---~~~~~g~~y~~~~~~~ 414 (435)
+++.||+||+++.+....... .....++|.|+++++++|+| +++++++.|+.|||+++| ++++.| ||++++.+
T Consensus 315 ~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~g--y~~~~~~~ 390 (517)
T PRK08008 315 LLTSYGMTETIVGIIGDRPGD-KRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKE--YYLDPKAT 390 (517)
T ss_pred EEeeccccccccccccCCccc-cccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhh--HhCChHHH
Confidence 999999999986555443332 44567899999999999999 689999999999999998 589999 99999999
Q ss_pred cccccccccCcceecCCCC
Q 013850 415 LFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 415 ~~~~~~~~~~~~~~tgD~~ 433 (435)
.+.+ ..++|++|||++
T Consensus 391 ~~~~---~~~g~~~TGDl~ 406 (517)
T PRK08008 391 AKVL---EADGWLHTGDTG 406 (517)
T ss_pred hhcc---cCCCCeeccceE
Confidence 8866 357799999975
No 69
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=3.6e-50 Score=408.05 Aligned_cols=397 Identities=19% Similarity=0.213 Sum_probs=298.9
Q ss_pred CchHHHHHh-hcccCCCceeeeecCCC------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013850 27 FSMVHFLFR-NSASYSSKLALIDADSD------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (435)
Q Consensus 27 ~tl~~~l~~-~~~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 99 (435)
.|+.+...+ ++.++|+++|++..+.+ +.+||+||.++++++|+.|+++|+++||+|+++++|++++++++|||
T Consensus 174 ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 174 LNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred eEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 677775544 44678999999876432 47999999999999999999999999999999999999999999999
Q ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH---------HHhhcC-CCcEEeccCCccccccccccccccc
Q 013850 100 IAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD---------KVKDLN-LPAVLLGSKDKVSSSGLISRSSKIV 169 (435)
Q Consensus 100 ~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
+++|++++|++|.++.+++..++++++++++|+++.... .+.... ...+++......... .......
T Consensus 254 ~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~---~~~~~~~ 330 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRV---KLREGDM 330 (728)
T ss_pred HHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCcccc---ccccCCc
Confidence 999999999999999999999999999999999875431 111111 122222211100000 0011234
Q ss_pred chhhhhhhcCC---CCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHH
Q 013850 170 SFHDLIELSGS---VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFH 246 (435)
Q Consensus 170 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~ 246 (435)
.|++++..... .....+....++++++|+|||||||.||||+++|.+++...........+ ..+|++++..+++|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l--~~~d~~~~~~~l~w 408 (728)
T PLN03052 331 SWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDI--RKGDIVCWPTNLGW 408 (728)
T ss_pred cHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCC--CCCcEEEECCCcHH
Confidence 56665543211 01122223456899999999999999999999999887665444333333 33499999999999
Q ss_pred HHHHHHHHHhhhhcCcEEEecCC-CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHH
Q 013850 247 VFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKEL 325 (435)
Q Consensus 247 ~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~ 325 (435)
+++.+ .++.+|..|+++++.++ +++..+++.++++++|++.++|+++..|.+.......++++||.++++|++++++.
T Consensus 409 ~~g~~-~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~ 487 (728)
T PLN03052 409 MMGPW-LVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSVDD 487 (728)
T ss_pred HhHHH-HHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCCHHH
Confidence 99984 78899999999999864 45678999999999999999999999998876556678999999999999999999
Q ss_pred HHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCC--ceeEEEeCCC--c
Q 013850 326 MEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQ--LGEIWVRGPN--V 401 (435)
Q Consensus 326 ~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~--~Gei~v~g~~--~ 401 (435)
..++.+.++..++++.||.||+++.+....+.. ....+++|.|.+|++++|+| ++|++++.|+ +|||+++++. .
T Consensus 488 ~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~-~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~ 565 (728)
T PLN03052 488 YLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQ-PQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGA 565 (728)
T ss_pred HHHHHHhcCCCCeEeeccChhhCcccccCCCCC-CCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCC
Confidence 988888776568999999999886544333221 34568899999999999999 6899999885 6999998653 3
Q ss_pred cccccccCCcccccccc-cc--cccCcceecCCCCC
Q 013850 402 TPGIVYINFFVFTLFLW-GC--EHTDSFIRGKDQQT 434 (435)
Q Consensus 402 ~~g~~y~~~~~~~~~~~-~~--~~~~~~~~tgD~~~ 434 (435)
..+ |+++.. +...| ++ +....|++|||+++
T Consensus 566 ~~~--~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~ 598 (728)
T PLN03052 566 SST--LLNADH-YKVYFKGMPVFNGKILRRHGDIFE 598 (728)
T ss_pred Ccc--ccCchh-hhhhhhcCCCCCCCEEEecCceEE
Confidence 346 776532 22222 00 01223889999864
No 70
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-50 Score=400.89 Aligned_cols=384 Identities=24% Similarity=0.342 Sum_probs=310.1
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
+|+.++|.+.++++|+++|+++. +..+||.||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 7 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~ 84 (528)
T PRK07470 7 MNLAHFLRQAARRFPDRIALVWG--DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVW 84 (528)
T ss_pred CCHHHHHHHHHHHCCCceEEEEC--CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEE
Confidence 78999999999999999999986 4899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCcccccccccccccccchhhhhhhcCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (435)
+|+++..+.+++..+++.++++.++++++..+.+.... ...++.... ......++++......
T Consensus 85 v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~- 152 (528)
T PRK07470 85 VPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGG-----------ARAGLDYEALVARHLG- 152 (528)
T ss_pred EecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCC-----------CcccccHHHHHhcCCC-
Confidence 99999999999999999999999999987655443321 111111111 0012344444432211
Q ss_pred CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcC
Q 013850 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (435)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G 261 (435)
.........++++++|+|||||||.||+|.++|+++...+..............|+++..+|++|.+++. .++ .+..|
T Consensus 153 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~-~~~~g 230 (528)
T PRK07470 153 ARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QLC-QVARG 230 (528)
T ss_pred CCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-HHH-HHhcC
Confidence 1122344577899999999999999999999999987654432222211112338999999999999985 444 45667
Q ss_pred cEEEecC--CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeee
Q 013850 262 NCVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIF 339 (435)
Q Consensus 262 ~~i~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~ 339 (435)
++.++.+ .+++..+++.++++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++.+.++ .+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~~~ 309 (528)
T PRK07470 231 AATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLG-KVLV 309 (528)
T ss_pred ceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhC-cHHH
Confidence 6666553 578999999999999999999999999999887666678899999999999999999999999997 8999
Q ss_pred cCcCcccccccccccCCCC------CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccc
Q 013850 340 QGYGMTETCAPISLENPLV------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVF 413 (435)
Q Consensus 340 ~~yG~tE~~~~~~~~~~~~------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~ 413 (435)
+.||+||+++.+....... .....+++|.|+++++++|+| +++++++.|+.|||+++|+.++.| ||++++.
T Consensus 310 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~g--y~~~~~~ 386 (528)
T PRK07470 310 QYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAG--YYNNPEA 386 (528)
T ss_pred HhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchh--hcCCHHH
Confidence 9999999887665432210 123457899999999999999 588999999999999999999999 9999999
Q ss_pred ccccccccccCcceecCCCCC
Q 013850 414 TLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 414 ~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+...| .++||+|||+++
T Consensus 387 ~~~~~----~~~~~~TGDl~~ 403 (528)
T PRK07470 387 NAKAF----RDGWFRTGDLGH 403 (528)
T ss_pred HHhhh----cCCcEecceeEE
Confidence 88876 377999999763
No 71
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.3e-50 Score=414.36 Aligned_cols=383 Identities=22% Similarity=0.302 Sum_probs=295.5
Q ss_pred CCchHHHHHhhcccCCC-ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 26 SFSMVHFLFRNSASYSS-KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 26 ~~tl~~~l~~~~~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
..|+.+.|.++++++|+ ++|+.+. ..+.+||+||.++++++|++|++. +++||+|+|+++|++++++++|||+++|+
T Consensus 203 ~~t~~~~l~~~~~~~p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 203 RETLYEALLSAQYRYGAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCHHHHHHHHHHHhCCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 37899999999999998 5787653 237899999999999999999886 59999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhh--cC---CCcEEeccCCcccccccccccccccchhhh--hhh
Q 013850 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKD--LN---LPAVLLGSKDKVSSSGLISRSSKIVSFHDL--IEL 177 (435)
Q Consensus 105 ~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 177 (435)
+++|+++.++.+++.++++.++++++|++++..+.... .. .....+..+... ....+... ...
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~~~ 350 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLK----------DDVTTADKLWIFA 350 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhh----------hhcchhHHHHHHH
Confidence 99999999999999999999999999998776543211 10 000111111000 00011100 000
Q ss_pred cCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhh
Q 013850 178 SGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQ 257 (435)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~ 257 (435)
.............++++++|+|||||||.||+|.++|+++.+.+........+. .+|++++.+|++|.+++...++.+
T Consensus 351 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~--~~d~~l~~~Pl~h~~g~~~~~~~~ 428 (718)
T PRK08043 351 HLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFT--PNDRFMSALPLFHSFGLTVGLFTP 428 (718)
T ss_pred HHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCC--ccCeEEEcCcchhhhhhHHHHHHH
Confidence 000011112234678999999999999999999999999988876655444333 349999999999999987778899
Q ss_pred hhcCcEEEecCC-CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCC
Q 013850 258 LQKGNCVVSMGK-FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (435)
Q Consensus 258 l~~G~~i~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 336 (435)
+..|+++++.+. +++..+++.+.++++|++.++|+++..+.+.. ...++++||.+++||+++++++.+.|++.++ +
T Consensus 429 l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g-~ 505 (718)
T PRK08043 429 LLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKFG-L 505 (718)
T ss_pred HHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHcC-C
Confidence 999999998864 57788899999999999999999998887642 3456789999999999999999999999996 9
Q ss_pred eeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccC--Ccccc
Q 013850 337 TIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYIN--FFVFT 414 (435)
Q Consensus 337 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~--~~~~~ 414 (435)
++++.||+||+++......+. ..+.+++|+|+||++++|+|. ++. ++.|||+++|++++.| ||+ +++.+
T Consensus 506 ~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~~~i~d~-~~~----~~~Gel~v~g~~v~~G--Y~~~e~~~~~ 576 (718)
T PRK08043 506 RILEGYGVTECAPVVSINVPM--AAKPGTVGRILPGMDARLLSV-PGI----EQGGRLQLKGPNIMNG--YLRVEKPGVL 576 (718)
T ss_pred CeecccCcccccceEEecCCc--ccCCCCCCCcCCCCeeEEecC-CCC----CCceEEEEecCCcccc--ccCCCCcccc
Confidence 999999999998776654333 346789999999999999984 432 5669999999999999 998 44432
Q ss_pred cccc----cccccCcceecCCCCC
Q 013850 415 LFLW----GCEHTDSFIRGKDQQT 434 (435)
Q Consensus 415 ~~~~----~~~~~~~~~~tgD~~~ 434 (435)
...+ ..+..+|||+|||+++
T Consensus 577 ~~~~~~~~~~~~~~gw~~TGDlg~ 600 (718)
T PRK08043 577 EVPTAENARGEMERGWYDTGDIVR 600 (718)
T ss_pred cccccccccccccCCeEecCCEEE
Confidence 1111 0112367999999864
No 72
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-50 Score=398.37 Aligned_cols=381 Identities=25% Similarity=0.316 Sum_probs=312.1
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.++|.++++++|+++|+++. ++.+||.||.+.++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 89 (524)
T PRK06188 12 ATYGHLLVSALKRYPDRPALVLG--DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRR 89 (524)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEE
Confidence 68999999999999999999987 4899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccc-cHHHHhhcCCC----cEEeccCCcccccccccccccccchhhhhhhcCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPE-LWDKVKDLNLP----AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (435)
+|++|..+.+++..+++.++++.+++++. ....+...... ..++.... ... ...+.+......
T Consensus 90 v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~-- 157 (524)
T PRK06188 90 TALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGP---------VPD-GVDLLAAAAKFG-- 157 (524)
T ss_pred EecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCC---------ccc-hhhHHHhhhccC--
Confidence 99999999999999999999999999876 33332221110 11111110 000 000111111001
Q ss_pred CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcC
Q 013850 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (435)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G 261 (435)
.........++++++|+|||||||.||+|.++|.++...+........+. .++++++..|++|..++. ++.++..|
T Consensus 158 ~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~--~~~~~l~~~pl~~~~g~~--~~~~l~~G 233 (524)
T PRK06188 158 PAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWP--ADPRFLMCTPLSHAGGAF--FLPTLLRG 233 (524)
T ss_pred cccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCC--cCcEEEEecCchhhhhHH--HHHHHHcC
Confidence 11111223456799999999999999999999999998877655554443 349999999999998874 57889999
Q ss_pred cEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecC
Q 013850 262 NCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 341 (435)
Q Consensus 262 ~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~ 341 (435)
+++++.+.+++..+++.++++++|++.++|+++..|++........++++|.+++||+++++++.+.+.+.++ ..+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~~ 312 (524)
T PRK06188 234 GTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFG-PIFAQY 312 (524)
T ss_pred CEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhC-chhhhe
Confidence 9999999999999999999999999999999999999987766778899999999999999999999999987 889999
Q ss_pred cCcccccccccccCCCC----CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccc
Q 013850 342 YGMTETCAPISLENPLV----GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFL 417 (435)
Q Consensus 342 yG~tE~~~~~~~~~~~~----~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~ 417 (435)
||+||++..+....... ......++|+|+++++++|+|+ ++++++.|+.|||+++|+.++.| |+++++.+...
T Consensus 313 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~-~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~ 389 (524)
T PRK06188 313 YGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDE-DGREVAQGEVGEICVRGPLVMDG--YWNRPEETAEA 389 (524)
T ss_pred eCccccCCceeecCchhccccccccCCccccccCCcEEEEEcC-CCCCCCCCCeeEEEEECcchhhh--hcCChHHhhhh
Confidence 99999976665443321 1345678999999999999994 69999999999999999999999 99999998887
Q ss_pred ccccccCcceecCCCC
Q 013850 418 WGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 418 ~~~~~~~~~~~tgD~~ 433 (435)
+ .+|||+|||++
T Consensus 390 ~----~~g~~~TGDl~ 401 (524)
T PRK06188 390 F----RDGWLHTGDVA 401 (524)
T ss_pred h----cCCceeecceE
Confidence 7 46799999975
No 73
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.8e-50 Score=398.98 Aligned_cols=377 Identities=20% Similarity=0.269 Sum_probs=309.5
Q ss_pred chHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEE
Q 013850 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (435)
Q Consensus 28 tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 107 (435)
++.+.|.+.++.+|+++|+.+. +..+||+||.+++.++|+.|++.|+++||+|+++++|+.++++++|||+++|++++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v 78 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYI 78 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 4788999999999999999876 48999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCC
Q 013850 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDV 187 (435)
Q Consensus 108 ~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (435)
|+++.++.+++..+++..+++.++++.+......... .+... .......... ......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~----~~~~~----------------~~~~~~~~~~--~~~~~~ 136 (502)
T TIGR01734 79 PVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVGTQ----IITLS----------------ALEQAETSGG--PVSFDH 136 (502)
T ss_pred CCCCcChHHHHHHHHHhcCCCEEEecccccccccCCc----eEEch----------------HhhhhhhhcC--Cccccc
Confidence 9999999999999999999999999876543322111 11000 0111111111 111123
Q ss_pred CCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec
Q 013850 188 SVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (435)
Q Consensus 188 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~ 267 (435)
...+++.++|+|||||||.||+|.++|+++.....+....... ..++++++..|++|..++. .++.++..|+++++.
T Consensus 137 ~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~ 213 (502)
T TIGR01734 137 AVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPL--SEGKQFLNQAPFSFDLSVM-DLYPCLASGGTLHCL 213 (502)
T ss_pred cCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCC--CCCceEEeecCceechhHH-HHHHHHHCCCEEEEc
Confidence 3467899999999999999999999999999887765554433 3338999999999999884 788999999999988
Q ss_pred CC---CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCc
Q 013850 268 GK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGM 344 (435)
Q Consensus 268 ~~---~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~ 344 (435)
+. .++..+++.+.+++++.+.++|+++..++.........++++|.++++|+++++++.+++.+.++++++++.||+
T Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~ 293 (502)
T TIGR01734 214 DKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGP 293 (502)
T ss_pred CHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccC
Confidence 64 478999999999999999999999988877655556678899999999999999999999999988999999999
Q ss_pred ccccccccccCCCC---CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccccc
Q 013850 345 TETCAPISLENPLV---GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 421 (435)
Q Consensus 345 tE~~~~~~~~~~~~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~ 421 (435)
||+++.+....... ......++|.+.++++++|+| +++.++++|+.|||+++|+.++.| |+++++.+.+.|-..
T Consensus 294 tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~g--y~~~~~~~~~~~~~~ 370 (502)
T TIGR01734 294 TEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKG--YLNNPEKTAEAFFSH 370 (502)
T ss_pred CcceEEEEEEEccccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEcccccccc--ccCCcccchHhheeC
Confidence 99876544322111 133446799999999999999 578999999999999999999999 999999988866222
Q ss_pred ccCcceecCCCCC
Q 013850 422 HTDSFIRGKDQQT 434 (435)
Q Consensus 422 ~~~~~~~tgD~~~ 434 (435)
...+||+|||+++
T Consensus 371 ~~~~~~~TGDlg~ 383 (502)
T TIGR01734 371 EGQPAYRTGDAGT 383 (502)
T ss_pred CCcEEEECCCEEE
Confidence 3346999999864
No 74
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.8e-50 Score=401.78 Aligned_cols=390 Identities=22% Similarity=0.324 Sum_probs=297.3
Q ss_pred CCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 25 PSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 25 ~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
++.|+.++|.+.++.+|+++|++.. +..+||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|+
T Consensus 12 ~~~~~~~~l~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~ 89 (579)
T PLN03102 12 VPLTPITFLKRASECYPNRTSIIYG--KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGA 89 (579)
T ss_pred ccccHHHHHHHHHHhCCCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 3468999999999999999999986 47999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----------CCcEEeccCCcccccccccccccccchhh
Q 013850 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----------LPAVLLGSKDKVSSSGLISRSSKIVSFHD 173 (435)
Q Consensus 105 ~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (435)
+++|+++.++.+++.++++.++++++|++++..+.+.... .+.+.+..... .. .......++.+
T Consensus 90 ~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~ 164 (579)
T PLN03102 90 VLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDF--PK---RPSSEELDYEC 164 (579)
T ss_pred EEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEeccccc--cc---CCcccccCHHH
Confidence 9999999999999999999999999999987766554321 11222211100 00 00111223444
Q ss_pred hhhhcCCCCCC---CCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHH
Q 013850 174 LIELSGSVTDI---PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGL 250 (435)
Q Consensus 174 ~~~~~~~~~~~---~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~ 250 (435)
+.......... ......++++++|+|||||||.||+|.++|+++............+ ...+++++.+|++|..++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~~~~l~~~pl~h~~g~ 242 (579)
T PLN03102 165 LIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEM--GTCPVYLWTLPMFHCNGW 242 (579)
T ss_pred HHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCC--CCCCeEEecCChhhhcch
Confidence 43322210100 0123457899999999999999999999999975543332222222 223789999999999998
Q ss_pred HHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHH
Q 013850 251 SVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQ 330 (435)
Q Consensus 251 ~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~ 330 (435)
. ..+.++..|+++++.+.+++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.++++
T Consensus 243 ~-~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~ 321 (579)
T PLN03102 243 T-FTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQ 321 (579)
T ss_pred h-HHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHH
Confidence 5 667788889999888888999999999999999999999999999987544444556788899999999999999986
Q ss_pred hhCCCCeeecCcCcccccccccccCCCC------C------CcCCCCcccccCCcEEEEEeCCCCccCCC--CCceeEEE
Q 013850 331 KNIPGATIFQGYGMTETCAPISLENPLV------G------VRRSGSAGTLVAGVEAQIVSVDTLKPLPP--NQLGEIWV 396 (435)
Q Consensus 331 ~~~~~~~~~~~yG~tE~~~~~~~~~~~~------~------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gei~v 396 (435)
+ ++ .++++.||+||+++.+....... . ....+..+.+++ .++++|++.+++++. ++.|||++
T Consensus 322 ~-~g-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v 397 (579)
T PLN03102 322 R-LG-FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVI 397 (579)
T ss_pred H-cC-CeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEE
Confidence 5 54 99999999999886543321110 0 011223333333 456667667777764 36899999
Q ss_pred eCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 397 RGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 397 ~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+|++++.| ||++++.+.+.| .+|||+|||+++
T Consensus 398 ~g~~~~~G--Y~~~~~~t~~~f----~~gw~~TGDlg~ 429 (579)
T PLN03102 398 KGSSIMKG--YLKNPKATSEAF----KHGWLNTGDVGV 429 (579)
T ss_pred ECcchhhh--hcCChhhhHhhh----ccCceecCceEE
Confidence 99999999 999999999877 467999999864
No 75
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-50 Score=398.63 Aligned_cols=391 Identities=21% Similarity=0.279 Sum_probs=307.4
Q ss_pred CCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 26 ~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
..++.++|.+.++.+|+++|+++. ++.+||+||.+++.++|+.|.+.|+++||+|+++++|+.+++++++||+++|++
T Consensus 9 ~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~ 86 (540)
T PRK06164 9 ADTLASLLDAHARARPDAVALIDE--DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGAT 86 (540)
T ss_pred CCCHHHHHHHHHHhCCCCeEEecC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcE
Confidence 379999999999999999999965 589999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccH-----HHHhhcC------CCcEEeccCCcccccccccccccccchhhh
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDL 174 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (435)
++|+++..+.+++.++++.++++++|+++++. +.+.... .+.+++...... .. .......+.+.
T Consensus 87 ~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~ 161 (540)
T PRK06164 87 VIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAAD-AT----PAPAPGARVQL 161 (540)
T ss_pred EEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcc-cC----CCCCccccccc
Confidence 99999999999999999999999999987642 2221111 111111110000 00 00000001111
Q ss_pred hhhcCC--CCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHH
Q 013850 175 IELSGS--VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV 252 (435)
Q Consensus 175 ~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~ 252 (435)
...... ..........++++++++|||||||.||+|.++|+++...+......+.+. .++++++.+|++|.+|+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~--~~~~~l~~~p~~~~~g~~- 238 (540)
T PRK06164 162 FALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYD--PGAVLLAALPFCGVFGFS- 238 (540)
T ss_pred ccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCC--CCCEEEEcCCchhHHHHH-
Confidence 111000 000011234568899999999999999999999999998877665555553 349999999999999995
Q ss_pred HHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecC-CCCcHHHHHHHHh
Q 013850 253 ILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGA-APLGKELMEDCQK 331 (435)
Q Consensus 253 ~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG-~~l~~~~~~~~~~ 331 (435)
.++.++..|+++++.+.+++..+++.|+++++|+++++|+++..|.+.. .....++++|.+..+| .+...++.+++.+
T Consensus 239 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (540)
T PRK06164 239 TLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARA 317 (540)
T ss_pred HHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhh
Confidence 7899999999999999999999999999999999999999999998872 3455788999886665 5566677777766
Q ss_pred hCCCCeeecCcCcccccccccccCCCCC-CcCCCCccccc-CCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccC
Q 013850 332 NIPGATIFQGYGMTETCAPISLENPLVG-VRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYIN 409 (435)
Q Consensus 332 ~~~~~~~~~~yG~tE~~~~~~~~~~~~~-~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~ 409 (435)
. ++++++.||+||++........... ..+....|.++ ++++++|+|++++.+++.|+.|||+++|++++.| ||+
T Consensus 318 ~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~g--Y~~ 393 (540)
T PRK06164 318 R--GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRG--YLD 393 (540)
T ss_pred c--CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEeccccccc--ccC
Confidence 5 5999999999999876655433211 22344667776 8999999998899999999999999999999999 999
Q ss_pred CcccccccccccccCcceecCCCCC
Q 013850 410 FFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+++.|.+.| ..++||+|||+++
T Consensus 394 ~~~~t~~~~---~~~~~~~TGDl~~ 415 (540)
T PRK06164 394 NPDATARAL---TDDGYFRTGDLGY 415 (540)
T ss_pred Cchhhhhcc---cCCCceecCCeEE
Confidence 999998876 3578999999864
No 76
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=8.4e-51 Score=444.41 Aligned_cols=392 Identities=19% Similarity=0.212 Sum_probs=307.8
Q ss_pred CchHHHHHhhcccCCCceeeeecC-------CCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013850 27 FSMVHFLFRNSASYSSKLALIDAD-------SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 99 (435)
.++.++|.++++++|+++|+++.. .++.+||+||.++++++|++|++.|+++||+|+|+++|++++++++|||
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~ 315 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGV 315 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 579999999999999999998631 2478999999999999999999999999999999999999999999999
Q ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcccc---HHHHhhcC---------CCcEEeccCCccccccccccccc
Q 013850 100 IAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL---WDKVKDLN---------LPAVLLGSKDKVSSSGLISRSSK 167 (435)
Q Consensus 100 ~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~---~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
+++|++++|++|.++.+++..+++.+++++++++... ...+.... ...+.+..... ....
T Consensus 316 l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 387 (1389)
T TIGR03443 316 LKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGS--------LVGG 387 (1389)
T ss_pred HhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccc--------cccc
Confidence 9999999999999999999999999999999987642 11111110 00011100000 0000
Q ss_pred ccch--hhhhhhcCC-CCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchH
Q 013850 168 IVSF--HDLIELSGS-VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPM 244 (435)
Q Consensus 168 ~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l 244 (435)
.... .+....... ..........++++++|+|||||||.||||+++|+++.+.+.+......+.. .|+++...++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~--~d~~~~~~~~ 465 (1389)
T TIGR03443 388 SLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSE--NDKFTMLSGI 465 (1389)
T ss_pred ccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCC--CCEEEEecCc
Confidence 0000 000000000 0111123356889999999999999999999999999988776655555433 3999999999
Q ss_pred HHHHHHHHHHHhhhhcCcEEEecCC---CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCC
Q 013850 245 FHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPL 321 (435)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~i~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l 321 (435)
+|..++. .++.+|..|+++++.+. .++..+++.++++++|++.++|+++..|.... ...+++||.+++||+++
T Consensus 466 ~~d~~~~-~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l 541 (1389)
T TIGR03443 466 AHDPIQR-DMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDIL 541 (1389)
T ss_pred eecchHH-HHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccC
Confidence 9998884 88999999999999864 36889999999999999999999999987543 24578999999999999
Q ss_pred cHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCC---------CcCCCCcccccCCcEEEEEeCC-CCccCCCCCc
Q 013850 322 GKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVG---------VRRSGSAGTLVAGVEAQIVSVD-TLKPLPPNQL 391 (435)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~~~~~~i~d~~-~~~~~~~g~~ 391 (435)
++.+.+++.+.+++++++|.||+||++..++....... .....++|+|+++++++|+|++ .+++++.|++
T Consensus 542 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~ 621 (1389)
T TIGR03443 542 TKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEV 621 (1389)
T ss_pred CHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCc
Confidence 99999999998888999999999998876554321110 1134578999999999999953 3688999999
Q ss_pred eeEEEeCCCccccccccCCcccccccc--ccc-----------------------ccCcceecCCCCC
Q 013850 392 GEIWVRGPNVTPGIVYINFFVFTLFLW--GCE-----------------------HTDSFIRGKDQQT 434 (435)
Q Consensus 392 Gei~v~g~~~~~g~~y~~~~~~~~~~~--~~~-----------------------~~~~~~~tgD~~~ 434 (435)
|||+|+|++++.| ||++|+.|.+.| +|| ..++||+|||+++
T Consensus 622 GEL~i~G~~v~~G--Y~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~ 687 (1389)
T TIGR03443 622 GEIYVRAGGLAEG--YLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGR 687 (1389)
T ss_pred eEEEecccccchh--cCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCcee
Confidence 9999999999999 999999999988 443 2368999999984
No 77
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=9.8e-51 Score=478.20 Aligned_cols=378 Identities=19% Similarity=0.245 Sum_probs=318.0
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.++|.++++++|+++|+++. ++.+||+||.++++++|+.|++.|+++|++|+|+++|++++++++|||+++|+++
T Consensus 511 ~~~~~~~~~~a~~~p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~ 588 (5163)
T PRK12316 511 RGVHRLFEEQVERTPEAPALAFG--EETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAY 588 (5163)
T ss_pred CCHHHHHHHHHHHCCCCeEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEE
Confidence 68999999999999999999987 4899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-CCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIP 185 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (435)
+|++|.++.+++.++++.++++++|++......+.... ...+.+... ........ ...+
T Consensus 589 vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~--~~~~ 648 (5163)
T PRK12316 589 VPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRP------------------AAWLEGYS--EENP 648 (5163)
T ss_pred eccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCc------------------chhhccCC--CCCC
Confidence 99999999999999999999999999987654433221 111111100 00011111 2223
Q ss_pred CCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEE
Q 013850 186 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (435)
Q Consensus 186 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~ 265 (435)
.....++++++|+|||||||.||||+++|+++.+.+.+......+.. +++++..+|++|..+++ .++.+|..|++++
T Consensus 649 ~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~--~d~~l~~~p~~fd~~~~-~~~~~L~~G~~l~ 725 (5163)
T PRK12316 649 GTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGV--GDTVLQKTPFSFDVSVW-EFFWPLMSGARLV 725 (5163)
T ss_pred CCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCC--CCEEEeeCCeehHHHHH-HHHHHHhCCCEEE
Confidence 34457899999999999999999999999999998877666555533 39999999999999985 8899999999999
Q ss_pred ecC---CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCc
Q 013850 266 SMG---KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 342 (435)
Q Consensus 266 ~~~---~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~y 342 (435)
+.+ .+++..+++.++++++|++.++|++++.|.+... ...+++||.+++|||++++++.++|.+.+++++++|.|
T Consensus 726 i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 803 (5163)
T PRK12316 726 VAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLY 803 (5163)
T ss_pred ECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCc
Confidence 984 4689999999999999999999999999987543 33578999999999999999999999988889999999
Q ss_pred CcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccc---c
Q 013850 343 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW---G 419 (435)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~---~ 419 (435)
|+||++..+.............++|+|++|++++|+| +++++++.|++|||+|+|++++.| |+++|+.|++.| .
T Consensus 804 G~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~G--Yl~~~~~t~~~f~~~~ 880 (5163)
T PRK12316 804 GPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRGLARG--YHGRPGLTAERFVPSP 880 (5163)
T ss_pred CcChheeeeeEEecccccCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccccChh--hCCChhhhhhhCCCCC
Confidence 9999885544333222244567899999999999999 579999999999999999999999 999999999988 2
Q ss_pred ccccCcceecCCCCC
Q 013850 420 CEHTDSFIRGKDQQT 434 (435)
Q Consensus 420 ~~~~~~~~~tgD~~~ 434 (435)
+.+.++||+|||+++
T Consensus 881 ~~~~~~~y~TGDl~~ 895 (5163)
T PRK12316 881 FVAGERMYRTGDLAR 895 (5163)
T ss_pred CCCCCeeEecCccEE
Confidence 224457999999974
No 78
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.7e-50 Score=401.04 Aligned_cols=395 Identities=31% Similarity=0.468 Sum_probs=310.2
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.++|.+.+..+|++.|+++. ++.+||.||.+++.++|+.|.+.|+++||+|+++++|+.++++++|||+++|+++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFL--GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIV 101 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEec--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEE
Confidence 47899999999999999999986 5889999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CCcEEeccCCccccccc-----------------cccc
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSSGL-----------------ISRS 165 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-----------------~~~~ 165 (435)
+|++|.++.+++..+++.++++++++++.....+.... ...+++........... .+..
T Consensus 102 vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (563)
T PRK06710 102 VQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSES 181 (563)
T ss_pred eccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhccccccccccccc
Confidence 99999999999999999999999999886654433221 11111111000000000 0000
Q ss_pred ccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHH
Q 013850 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMF 245 (435)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~ 245 (435)
.....+..+..... .........++++++++|||||||.||+|.++|+++.................++++++..|++
T Consensus 182 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 259 (563)
T PRK06710 182 ETIHLWNSVEKEVN--TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFF 259 (563)
T ss_pred chhhhhhhhhhccc--cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchH
Confidence 00001111111000 1111112235789999999999999999999999987553322221111122337889999999
Q ss_pred HHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHH
Q 013850 246 HVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKEL 325 (435)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~ 325 (435)
|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++........++++|.+++||+++++++
T Consensus 260 ~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~ 339 (563)
T PRK06710 260 HVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEV 339 (563)
T ss_pred HHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHH
Confidence 99998766778899999999998899999999999999999999999999999876656667789999999999999999
Q ss_pred HHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccc
Q 013850 326 MEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGI 405 (435)
Q Consensus 326 ~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~ 405 (435)
.+++.+.++ .++++.||+||++......... ....++++|.+.+++.++++|++++.+++.|+.|||+++|+.++.|
T Consensus 340 ~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~g- 416 (563)
T PRK06710 340 QEKFETVTG-GKLVEGYGLTESSPVTHSNFLW-EKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIMKG- 416 (563)
T ss_pred HHHHHHhhC-CCEecccccccCccccccCccc-ccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccchh-
Confidence 999999886 8999999999988755433221 1334678999999999999998899999999999999999999999
Q ss_pred cccCCcccccccccccccCcceecCCCC
Q 013850 406 VYINFFVFTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 406 ~y~~~~~~~~~~~~~~~~~~~~~tgD~~ 433 (435)
|+++++.+...+ .++||+|||++
T Consensus 417 -Y~~~~~~~~~~~----~~g~~~TGD~~ 439 (563)
T PRK06710 417 -YWNKPEETAAVL----QDGWLHTGDVG 439 (563)
T ss_pred -hhCChHHHhhhc----ccCcccccceE
Confidence 999999998876 36799999976
No 79
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=8.3e-50 Score=394.62 Aligned_cols=378 Identities=25% Similarity=0.369 Sum_probs=308.8
Q ss_pred HHHHHhh-cccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEe
Q 013850 30 VHFLFRN-SASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAST 108 (435)
Q Consensus 30 ~~~l~~~-~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 108 (435)
.++|.++ ++.+|+++|+++. +..+||.||.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|++++|
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~ 84 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDD--ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVA 84 (508)
T ss_pred HHHHHHHHhcccCCceEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEee
Confidence 3455555 5779999999986 589999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCcccccccccccccccchhhhhhhcCCCCC
Q 013850 109 ANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (435)
Q Consensus 109 i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (435)
+++.++.+++..+++.++++++++++...+.+.... ...++..... ......+.++..... ..
T Consensus 85 l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~~ 152 (508)
T TIGR02262 85 LNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRP----------EAGEVQLAELLATES--EQ 152 (508)
T ss_pred ccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCC----------CcccccHHHHhhcCC--Cc
Confidence 999999999999999999999999987766554332 1122221110 111123333333222 22
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHH-hhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCc
Q 013850 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMIS-AHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (435)
Q Consensus 184 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~ 262 (435)
..+....++++++++|||||||.||+|.++|+++........ ....+ ..+|++++.+|++|.+++...++.++..|+
T Consensus 153 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~ 230 (508)
T TIGR02262 153 FKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGI--REDDVVFSAAKLFFAYGLGNALTFPMSVGA 230 (508)
T ss_pred cCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCC--CCCCEEEEcCchHHHHHHHHHHHHHHHcCc
Confidence 233455678999999999999999999999999987755422 22222 333899999999999999767888899999
Q ss_pred EEEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecC
Q 013850 263 CVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 341 (435)
Q Consensus 263 ~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~ 341 (435)
++++.+ .+++..+++.|+++++|++.++|.++..+++.........+++|.+++||+++++++.+.|.+.++ +++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~v~~~ 309 (508)
T TIGR02262 231 TTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFG-VDIVDG 309 (508)
T ss_pred eEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhC-CchhhC
Confidence 998875 468999999999999999999999999888765444455679999999999999999999999996 999999
Q ss_pred cCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccccc
Q 013850 342 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 421 (435)
Q Consensus 342 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~ 421 (435)
||+||++.+....... ....+++|.|+++++++|+| +++.++++|+.|||+++|+.++.| |+++++.+.+.|
T Consensus 310 YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~g--Y~~~~~~~~~~~--- 381 (508)
T TIGR02262 310 IGSTEMLHIFLSNLPG--DVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATM--YWNNRAKTRDTF--- 381 (508)
T ss_pred ccccccCceeecCCcc--CCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccc--cCCCHHHhHhhh---
Confidence 9999998765543332 34567899999999999999 799999999999999999999999 999999998877
Q ss_pred ccCcceecCCCC
Q 013850 422 HTDSFIRGKDQQ 433 (435)
Q Consensus 422 ~~~~~~~tgD~~ 433 (435)
.++||+|||++
T Consensus 382 -~~~~~~TGD~~ 392 (508)
T TIGR02262 382 -QGEWTRSGDKY 392 (508)
T ss_pred -hcCceeccceE
Confidence 46788888865
No 80
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=6.8e-50 Score=397.20 Aligned_cols=379 Identities=22% Similarity=0.278 Sum_probs=307.1
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.+.|.++++ |+++|+++. ++.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 25 ~~~~~~~~~~a~--p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~ 100 (536)
T PRK10946 25 LPLTDILTRHAA--SDAIAVICG--ERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAP 100 (536)
T ss_pred ccHHHHHHHhhC--CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEE
Confidence 579999988887 999999987 4899999999999999999999999999999999999999999999999999988
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEcccc--------HHHHhhcC--CCcEEeccCCcccccccccccccccchhhhhh
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPEL--------WDKVKDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (435)
+++.+.....++..+++.++++.+++++.. .+.+.... ...+++... .....+.+.+.
T Consensus 101 v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 168 (536)
T PRK10946 101 VNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLND------------DGEHSLDDAIN 168 (536)
T ss_pred ecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecC------------CCCccHHHHhh
Confidence 877777778889999999999999998642 22232221 112222111 11223333333
Q ss_pred hcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHH-HHH
Q 013850 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILY 255 (435)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~-~~~ 255 (435)
... ...+.....++++++++|||||||.||+|.++|+++...+........+.. ++++++.+|++|.+++.. .++
T Consensus 169 ~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~--~~~~l~~~p~~h~~~~~~~~~~ 244 (536)
T PRK10946 169 HPA--EDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTP--QTRYLCALPAAHNYPMSSPGAL 244 (536)
T ss_pred Ccc--cccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCC--CceEEEecCccccccchhhhHH
Confidence 222 222234456789999999999999999999999999998776655554433 399999999999988753 478
Q ss_pred hhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcc--cccCCCCcceeEEEecCCCCcHHHHHHHHhhC
Q 013850 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNS--LVRKFDISSLKLVGSGAAPLGKELMEDCQKNI 333 (435)
Q Consensus 256 ~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~--~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~ 333 (435)
.++..|+++++.+.+++..+++.++++++|++.++|.++..|++.. ......++++|.+++||+++++++.+++.+.+
T Consensus 245 ~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~ 324 (536)
T PRK10946 245 GVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL 324 (536)
T ss_pred HHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc
Confidence 8899999999998889999999999999999999999999998763 22334578999999999999999999999998
Q ss_pred CCCeeecCcCcccccccccccCCCCCCcCCCCccccc-CCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcc
Q 013850 334 PGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFV 412 (435)
Q Consensus 334 ~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~ 412 (435)
+ +++++.||+||+....... .........++|+|+ +++.++|+| +++++++.|+.|||+++|+.++.| ||++++
T Consensus 325 g-~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~G--Y~~~~~ 399 (536)
T PRK10946 325 G-CQLQQVFGMAEGLVNYTRL-DDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRG--YYKSPQ 399 (536)
T ss_pred C-CeEEEeecccccceeeecC-CCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchh--hcCCcc
Confidence 6 9999999999965433222 111133467899998 899999999 689999999999999999999999 999999
Q ss_pred cccccccccccCcceecCCCC
Q 013850 413 FTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 413 ~~~~~~~~~~~~~~~~tgD~~ 433 (435)
.+.+.| ..++||+|||++
T Consensus 400 ~t~~~~---~~d~~~~TGDl~ 417 (536)
T PRK10946 400 HNASAF---DANGFYCSGDLV 417 (536)
T ss_pred cchhhc---ccCCceecCceE
Confidence 988866 357899999977
No 81
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.8e-50 Score=469.19 Aligned_cols=379 Identities=21% Similarity=0.282 Sum_probs=316.1
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.++|.++++++|+++|+++. ++.+||+||.++++++|+.|++.|+++|++|++++++++++++++|||+++|+++
T Consensus 1574 ~~~~~~~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~ 1651 (3956)
T PRK12467 1574 RLVHQLIEDQAAATPEAVALVFG--EQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAY 1651 (3956)
T ss_pred ccHHHHHHHHHHhCCCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCcee
Confidence 68999999999999999999987 4899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC-CcEEeccCCcccccccccccccccchhhhhhhcCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL-PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIP 185 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (435)
+|++|.++.+++.++++.+++++++++......+..... ..+.+... ........ ...+
T Consensus 1652 vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~--~~~~ 1711 (3956)
T PRK12467 1652 VPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQE------------------DDWLEGYS--DSNP 1711 (3956)
T ss_pred eecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEeccc------------------cchhccCC--CCCC
Confidence 999999999999999999999999998876554432211 11111100 01111111 2222
Q ss_pred CCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEE
Q 013850 186 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (435)
Q Consensus 186 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~ 265 (435)
.....++++++|+|||||||.||||+++|+++.+.+.+......+.. +|+++...|++|..+++ .++.+|..|++++
T Consensus 1712 ~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lv 1788 (3956)
T PRK12467 1712 AVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSA--ADVVLQFTSFAFDVSVW-ELFWPLINGARLV 1788 (3956)
T ss_pred CCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCc--ccEEEEecCccHHHHHH-HHHHHHhCCCEEE
Confidence 34457899999999999999999999999999988776655554433 39999999999999985 8899999999999
Q ss_pred ecCC---CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCc
Q 013850 266 SMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 342 (435)
Q Consensus 266 ~~~~---~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~y 342 (435)
+.+. .++..+++.|+++++|++.++|+++..|.+... ....+++||.+++|||++++++.+.|.+.+++..++|.|
T Consensus 1789 i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 1867 (3956)
T PRK12467 1789 IAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLY 1867 (3956)
T ss_pred EcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCc
Confidence 9853 479999999999999999999999999987532 234678999999999999999999999998878999999
Q ss_pred CcccccccccccCCC---CCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc
Q 013850 343 GMTETCAPISLENPL---VGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 419 (435)
Q Consensus 343 G~tE~~~~~~~~~~~---~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~ 419 (435)
|+||++..++..... .......++|+|+++++++|+| +++++++.|++|||+++|++++.| |+++|+.|.+.|-
T Consensus 1868 G~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~G--Yl~~p~~t~~~f~ 1944 (3956)
T PRK12467 1868 GPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARG--YLNRPALTAERFV 1944 (3956)
T ss_pred cCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccccc--ccCChhhhhhhCc
Confidence 999998766543222 1122356899999999999999 689999999999999999999999 9999999999881
Q ss_pred --cc--ccCcceecCCCCC
Q 013850 420 --CE--HTDSFIRGKDQQT 434 (435)
Q Consensus 420 --~~--~~~~~~~tgD~~~ 434 (435)
-+ ..++||+|||+++
T Consensus 1945 ~~p~~~~~~r~yrTGDl~~ 1963 (3956)
T PRK12467 1945 ADPFGTVGSRLYRTGDLAR 1963 (3956)
T ss_pred CCCCCCCCccceeccceEE
Confidence 11 1346999999874
No 82
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=2.3e-49 Score=394.18 Aligned_cols=395 Identities=30% Similarity=0.464 Sum_probs=311.5
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+.++|.++++.+|+++|+... ++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 21 ~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 21 GTLPDLLSKAAADYGPRPALEFR--DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCHHHHHHHHHHHcCCCceEEEC--CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 48999999999999999999876 4799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEcccc--HHHHhhc----CCCcEEeccCCccccccc----ccccccccchhhhhh
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPEL--WDKVKDL----NLPAVLLGSKDKVSSSGL----ISRSSKIVSFHDLIE 176 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 176 (435)
+|++|.++.+++..+++.++++.+++++.. .+.+... ....+++........... .........++++++
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 999999999999999999999999998631 1111111 111122211110000000 001122344555544
Q ss_pred hcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh----ccCCCcEEEecchHHHHHHHHH
Q 013850 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL----VGELDHVVLCVLPMFHVFGLSV 252 (435)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~----~~~~~d~~l~~~~l~~~~g~~~ 252 (435)
... .........++++++++|||||||.||+|.++|+++....... ..... .....+++++..|++|.+++..
T Consensus 179 ~~~--~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~ 255 (541)
T TIGR03205 179 GAA--APAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHIYALTV 255 (541)
T ss_pred cCC--CCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHHHHHHH
Confidence 322 1222334567899999999999999999999999987653321 11111 1122378999999999999877
Q ss_pred HHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhh
Q 013850 253 ILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKN 332 (435)
Q Consensus 253 ~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~ 332 (435)
.++.++..|+++++...+++..+++.|+++++|++.++|+++..|.+........++++|.++.||+++++++.+++.+.
T Consensus 256 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~ 335 (541)
T TIGR03205 256 ILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERK 335 (541)
T ss_pred HHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHH
Confidence 78899999999999988899999999999999999999999999987654445567899999999999999999999888
Q ss_pred CCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEe-CCCCccCCCCCceeEEEeCCCccccccccCCc
Q 013850 333 IPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVS-VDTLKPLPPNQLGEIWVRGPNVTPGIVYINFF 411 (435)
Q Consensus 333 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~ 411 (435)
++ .++++.||+||++..+....... ...++++|.|++++.++|.+ .++++.++.|+.|||+++|++++.| ||+++
T Consensus 336 ~~-~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~g--y~~~~ 411 (541)
T TIGR03205 336 TG-LKLKSGWGMTETCSPGTGHPPEG-PDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRG--YWNRP 411 (541)
T ss_pred hC-CCeecccccccCCcccccCCCCC-CCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCcccc--ccCCh
Confidence 86 99999999999987665543321 33567899999999998864 2678899999999999999999999 99999
Q ss_pred ccccccccccccCcceecCCCCC
Q 013850 412 VFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 412 ~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+.+.+.| .++||+|||+++
T Consensus 412 ~~~~~~~----~~~~~~TGD~~~ 430 (541)
T TIGR03205 412 EESAEAF----VGDRFLTGDIGY 430 (541)
T ss_pred hhhHhhh----ccCCcccCceEE
Confidence 9998877 356888888753
No 83
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-49 Score=394.95 Aligned_cols=370 Identities=17% Similarity=0.188 Sum_probs=294.7
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
.|+.++|.+++ .|+++|+++. +..+||.||.++++++|+.|.+.|+ .+||+|+++++|+++++++++||+++|++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~ 78 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG--DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYV 78 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCE
Confidence 57888888765 6999999886 4899999999999999999999999 79999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC---CCcEEeccCCcccccccccccccccchhhhhhhcCCCC
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT 182 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (435)
++|++|.++.+++..+++.++++++|++++....+.... .+.+.+. . ..+.+++.... .
T Consensus 79 ~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~-~---------------~~~~~~~~~~~--~ 140 (540)
T PRK13388 79 LVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVD-T---------------PAYAELVAAAG--A 140 (540)
T ss_pred EEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEcc-c---------------hhhhhhhcccc--C
Confidence 999999999999999999999999999987766655432 1111111 0 11222222111 1
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCc
Q 013850 183 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (435)
Q Consensus 183 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~ 262 (435)
..+.....++++++|+|||||||.||+|.++|+++............+. .+|++++.+|++|.+++...++.++..|+
T Consensus 141 ~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~~~~~~~~~~l~~G~ 218 (540)
T PRK13388 141 LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLT--RDDVCYVSMPLFHSNAVMAGWAPAVASGA 218 (540)
T ss_pred cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCC--CCCEEEEeeCchhhcchHHHHHHHHHcCc
Confidence 1122335679999999999999999999999999987766555544443 34999999999999998756677899999
Q ss_pred EEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCc
Q 013850 263 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 342 (435)
Q Consensus 263 ~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~y 342 (435)
++++.+.+++..+++.++++++|++..+|..+..+............++|.+ + |++++++..+.+.+.++ .++++.|
T Consensus 219 ~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~~-~~l~~~Y 295 (540)
T PRK13388 219 AVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRFG-CQVEDGY 295 (540)
T ss_pred EEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHhC-Cceeccc
Confidence 9999988899999999999999999999999999887654333334466643 3 55678888899999886 9999999
Q ss_pred CcccccccccccCCCCCCcCCCCcccccCCcEEE-----------EEeCCCCccC-CCCCceeEEEe-CCCccccccccC
Q 013850 343 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQ-----------IVSVDTLKPL-PPNQLGEIWVR-GPNVTPGIVYIN 409 (435)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-----------i~d~~~~~~~-~~g~~Gei~v~-g~~~~~g~~y~~ 409 (435)
|+||++.++.... ..+.+++|+|++|+++. ++| ++|+.+ +.++.|||+++ |++++.| ||+
T Consensus 296 G~tE~~~~~~~~~----~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~g--Y~~ 368 (540)
T PRK13388 296 GSSEGAVIVVREP----GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEG--YYN 368 (540)
T ss_pred ccccccceeecCC----CCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCccccc--ccC
Confidence 9999987664321 23567899999997652 344 345555 34679999998 9999999 999
Q ss_pred CcccccccccccccCcceecCCCCC
Q 013850 410 FFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+++.+.+.| .+|||+|||+++
T Consensus 369 ~~~~t~~~~----~~g~~~TGD~~~ 389 (540)
T PRK13388 369 NPEATAERM----RHGMYWSGDLAY 389 (540)
T ss_pred ChHHHHHHh----hcCceeccceEE
Confidence 999998877 357888888763
No 84
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-49 Score=393.97 Aligned_cols=366 Identities=19% Similarity=0.249 Sum_probs=295.5
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.+.|.++++.+|+++|+++. +..+||.||.++++++|+.|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 35 ~~~~~~~~~~a~~~p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 35 TNPYTLLAVTAARWPGRTAIIDD--DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred CcHHHHHHHHHHHCCCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 78999999999999999999976 4789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|+++.++.+++..+++.++++.+++++...+.+.........+... ... .. . ...
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~----------------~~~-~~---~--~~~-- 168 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPA----------------TAG-AE---E--SGG-- 168 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccc----------------hhh-hh---c--CCC--
Confidence 99999999999999999999999999988776655443222221110 000 00 0 000
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHH--HHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEE
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLM--ISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCV 264 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~--~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i 264 (435)
.....++.++|+|||||||.||+|.++|......... ......+ ..+++++..+|++|.+++. .++.++..|+++
T Consensus 169 ~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~~~ 245 (516)
T PRK13383 169 RPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRL--RTGSRISVAMPMFHGLGLG-MLMLTIALGGTV 245 (516)
T ss_pred CCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhcc--CCCCeEEEecCCcchhhHH-HHHHHHhcCCEE
Confidence 0112355679999999999999999999743221111 1111222 2348999999999999995 677889999999
Q ss_pred EecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc--cCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCc
Q 013850 265 VSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 342 (435)
Q Consensus 265 ~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~y 342 (435)
++...+++..+++.++++++|.+.++|+++..|.+.... ....++++|.+++||+++++++.++|.+.++ .++++.|
T Consensus 246 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g-~~v~~~Y 324 (516)
T PRK13383 246 LTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYG-DILYNGY 324 (516)
T ss_pred EECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcC-chhhhcc
Confidence 999889999999999999999999999999999875432 2345789999999999999999999999997 8999999
Q ss_pred CcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccc
Q 013850 343 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEH 422 (435)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~ 422 (435)
|+||++....... .......+++|+|+++++++|+| ++++++++|+.|||+++|+.++.| |++++... +
T Consensus 325 G~tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~--Y~~~~~~~---~---- 393 (516)
T PRK13383 325 GSTEVGIGALATP-ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTR--YTDGGGKA---V---- 393 (516)
T ss_pred cccccccceeccc-cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCccccc--ccCCchhh---e----
Confidence 9999986554332 22234567899999999999999 578999999999999999999999 99876421 1
Q ss_pred cCcceecCCCC
Q 013850 423 TDSFIRGKDQQ 433 (435)
Q Consensus 423 ~~~~~~tgD~~ 433 (435)
.+||++|||++
T Consensus 394 ~~g~~~TGDl~ 404 (516)
T PRK13383 394 VDGMTSTGDMG 404 (516)
T ss_pred ecCceecceeE
Confidence 35788888865
No 85
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-49 Score=397.67 Aligned_cols=400 Identities=22% Similarity=0.290 Sum_probs=311.6
Q ss_pred CchHHHHHhhcccCCCceeeeecC-CCcceeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 27 FSMVHFLFRNSASYSSKLALIDAD-SDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~-~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
.|+.++|.+.+..+|++.|+++.+ ..+.+||.||.+++.++|++|++ .|+++||+|+++++|+.+++++++||+++|+
T Consensus 10 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~ 89 (576)
T PRK05620 10 LSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGA 89 (576)
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCC
Confidence 789999999999999999998643 24789999999999999999986 7999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCcccc-cccccccccccchhhhhhhc
Q 013850 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSS-SGLISRSSKIVSFHDLIELS 178 (435)
Q Consensus 105 ~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 178 (435)
+++|++|..+.+++.++++.++++++|+++...+.+.... .+.+++........ ...........+|+++.+..
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (576)
T PRK05620 90 VFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGR 169 (576)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhcC
Confidence 9999999999999999999999999999987666554322 12222222111000 00001122345677776543
Q ss_pred CCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhh
Q 013850 179 GSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQL 258 (435)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l 258 (435)
. .........++++++++|||||||.||+|.++|+++............+....++++++.+|++|.+++. ..+.++
T Consensus 170 ~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~-~~~~~l 246 (576)
T PRK05620 170 S--TVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWG-VPLAAF 246 (576)
T ss_pred C--CcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhH-HHHHHH
Confidence 2 2233345678999999999999999999999999986654332221112223349999999999999985 678889
Q ss_pred hcCcEEEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCe
Q 013850 259 QKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGAT 337 (435)
Q Consensus 259 ~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~ 337 (435)
..|+++++.. .+++..+++.++++++|.+.++|+++..|+...........+||.+++||+++++++.++|++.++ ++
T Consensus 247 ~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~-~~ 325 (576)
T PRK05620 247 MSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERYG-VD 325 (576)
T ss_pred hcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHhC-Cc
Confidence 9999998875 578999999999999999999999999888754433344568999999999999999999999986 99
Q ss_pred eecCcCcccccccccccCCCCC------CcCCCCcccccCCcEEEEEeCCCCccCC--CCCceeEEEeCCCccccccccC
Q 013850 338 IFQGYGMTETCAPISLENPLVG------VRRSGSAGTLVAGVEAQIVSVDTLKPLP--PNQLGEIWVRGPNVTPGIVYIN 409 (435)
Q Consensus 338 ~~~~yG~tE~~~~~~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~~~~~~~--~g~~Gei~v~g~~~~~g~~y~~ 409 (435)
+++.||+||++.......+.+. .....++|++.++++++|+| + +..++ .++.|||+++|+.++.| ||+
T Consensus 326 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~g--Y~~ 401 (576)
T PRK05620 326 VVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTAS--YYH 401 (576)
T ss_pred eeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCccccc--ccC
Confidence 9999999999876554333211 01134789999999999999 4 66554 47899999999999999 999
Q ss_pred Ccccc----cccc---------cccccCcceecCCCCC
Q 013850 410 FFVFT----LFLW---------GCEHTDSFIRGKDQQT 434 (435)
Q Consensus 410 ~~~~~----~~~~---------~~~~~~~~~~tgD~~~ 434 (435)
+++.+ ...| ..+..++||+|||+++
T Consensus 402 ~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~ 439 (576)
T PRK05620 402 SPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGS 439 (576)
T ss_pred CccccccccccccccccchhhhcccccCCcEecCceEE
Confidence 99987 3322 0123468999999864
No 86
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.2e-50 Score=473.88 Aligned_cols=379 Identities=20% Similarity=0.247 Sum_probs=314.7
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.++|.++++++|+++|+++.+ +.+||+||.++++++|+.|++.|+++|++|+|+++|++++++++|||+++|+++
T Consensus 2003 ~~~~~~~~~~a~~~p~~~A~~~~~--~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~ 2080 (5163)
T PRK12316 2003 PGVHQRIAEQAARAPEAIAVVFGD--QHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAY 2080 (5163)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcCC--CeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEE
Confidence 589999999999999999999874 899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|++|.++.+++.++++.++++++++++.....+..... ...+..+. .... .... ...+.
T Consensus 2081 vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-~~~~~~~~----------------~~~~-~~~~--~~~~~ 2140 (5163)
T PRK12316 2081 VPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAG-VARLPLDR----------------DAEW-ADYP--DTAPA 2140 (5163)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccc-cceEeccc----------------hhhh-hccC--ccCCC
Confidence 999999999999999999999999999876554422111 00111000 0000 0001 12223
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....++++++|+|||||||.||||+++|+++.+.+........+.. +|+++...|++|..++. .++.+|..|+++++
T Consensus 2141 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~fd~~~~-~~~~~L~~G~~~~~ 2217 (5163)
T PRK12316 2141 VQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSP--ADCELQFMSFSFDGAHE-QWFHPLLNGARVLI 2217 (5163)
T ss_pred CCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCC--cceEEEecCchHHHHHH-HHHHHHhCCCEEEe
Confidence 4567899999999999999999999999999998877666555533 39999999999998884 89999999999988
Q ss_pred cC--CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCc
Q 013850 267 MG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGM 344 (435)
Q Consensus 267 ~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~ 344 (435)
.+ .+++..+++.++++++|++.++|+++..|.+...... ..++||.+++|||++++++.++|.+.+++.+++|.||+
T Consensus 2218 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 2296 (5163)
T PRK12316 2218 RDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGP 2296 (5163)
T ss_pred CCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccc
Confidence 75 3589999999999999999999999999987654332 34589999999999999999999998888999999999
Q ss_pred ccccccccccCCCCCCc---CCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccc--c
Q 013850 345 TETCAPISLENPLVGVR---RSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW--G 419 (435)
Q Consensus 345 tE~~~~~~~~~~~~~~~---~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~--~ 419 (435)
||++..++......... ...++|+|++|++++|+| +++++++.|++|||+|+|++++.| ||++|+.|.+.| .
T Consensus 2297 TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~G--Y~~~p~~T~~~f~~~ 2373 (5163)
T PRK12316 2297 TEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARG--YLNRPGLTAERFVPD 2373 (5163)
T ss_pred hhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhccc--ccCChhhhhhhccCC
Confidence 99987665433221111 235799999999999999 588999999999999999999999 999999999988 1
Q ss_pred -ccc-cCcceecCCCCC
Q 013850 420 -CEH-TDSFIRGKDQQT 434 (435)
Q Consensus 420 -~~~-~~~~~~tgD~~~ 434 (435)
+.. .++||+|||+++
T Consensus 2374 ~~~~~~~~~yrTGDl~~ 2390 (5163)
T PRK12316 2374 PFSASGERLYRTGDLAR 2390 (5163)
T ss_pred CCCCCCCeeEecccEEE
Confidence 211 357999999984
No 87
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.6e-50 Score=398.98 Aligned_cols=370 Identities=16% Similarity=0.219 Sum_probs=282.6
Q ss_pred hHHHHHhhcccCCCceeeeecCCC--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 29 MVHFLFRNSASYSSKLALIDADSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 29 l~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
+.+.|.++++++|+++|+++.+.+ +.+||+||.++++++|+.|.++ ++||+|+|+++|++++++++|||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 788899999999999999988544 6899999999999999999987 899999999999999999999999999986
Q ss_pred EecCCC-------CCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcC
Q 013850 107 STANPV-------YTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 179 (435)
Q Consensus 107 v~i~~~-------~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (435)
++++.. ...+++..+++.++++++|+++.....+........+ . .+.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~- 141 (525)
T PRK05851 82 SILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSSVTV-H------------------DLATAAHTN- 141 (525)
T ss_pred cCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhccccc-c------------------ccccccccc-
Confidence 543211 1234556678999999999988766554432211100 0 000000000
Q ss_pred CCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhh
Q 013850 180 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (435)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~ 259 (435)
.........++++++|+|||||||.||+|.++|+++.+.+........+. ..+|++++.+|++|.+++. .++.++.
T Consensus 142 --~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~g~~-~~~~~l~ 217 (525)
T PRK05851 142 --RSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLD-AATDVGCSWLPLYHDMGLA-FLLTAAL 217 (525)
T ss_pred --ccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCC-CCCCeEEEcCCCccCccHH-HHHHHHH
Confidence 00011224678999999999999999999999999998877665544442 1349999999999999995 7889999
Q ss_pred cCcEEEecCC--C--CHHHHHHHHHhcCceEEEecHHHHHHHHhccc-ccCCCCcceeEEEecCCCCcHHHHHHHHhh--
Q 013850 260 KGNCVVSMGK--F--DIEMALRAIEKYRVTVWWVVPPIILALAKNSL-VRKFDISSLKLVGSGAAPLGKELMEDCQKN-- 332 (435)
Q Consensus 260 ~G~~i~~~~~--~--~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~-~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~-- 332 (435)
.|+++++.+. + ++..+++.++++++|++...|.++..+.+... ....++++||.+++||+++++++.++|.+.
T Consensus 218 ~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~ 297 (525)
T PRK05851 218 AGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMA 297 (525)
T ss_pred cCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHh
Confidence 9999999863 4 67889999999999988655555555544321 234567899999999999999999999875
Q ss_pred -CC--CCeeecCcCcccccccccccCCCC-------------CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEE
Q 013850 333 -IP--GATIFQGYGMTETCAPISLENPLV-------------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWV 396 (435)
Q Consensus 333 -~~--~~~~~~~yG~tE~~~~~~~~~~~~-------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v 396 (435)
++ +.++++.||+||++..+....+.. ...+.+++|+|++|++++|+|++.+.+++.|+.|||++
T Consensus 298 ~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v 377 (525)
T PRK05851 298 PFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEI 377 (525)
T ss_pred hcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEE
Confidence 33 246999999999986655432211 01234689999999999999966566789999999999
Q ss_pred eCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 397 RGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 397 ~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+|++++.| ||++++.+ .++||+|||+++
T Consensus 378 ~g~~~~~G--Y~~~~~~~--------~~~~~~TGDl~~ 405 (525)
T PRK05851 378 RGASMMSG--YLGQAPID--------PDDWFPTGDLGY 405 (525)
T ss_pred ecCchhhc--cccCCccC--------CCCceeccceEE
Confidence 99999999 99998753 356888888763
No 88
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2.2e-49 Score=400.50 Aligned_cols=394 Identities=19% Similarity=0.222 Sum_probs=292.4
Q ss_pred CchHHHHHhhcccCCCceeeeecCC-C--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcC
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADS-D--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~-~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 103 (435)
.|+.+.+.++ .++++|++..+. + +.+||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||+++|
T Consensus 87 ~n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~G 163 (652)
T TIGR01217 87 LNYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVG 163 (652)
T ss_pred eeHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhC
Confidence 7788887764 467888876432 2 589999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCCeEEEEccccH---------HHHhhc----C-CCcEEeccCCccccccccccccccc
Q 013850 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELW---------DKVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIV 169 (435)
Q Consensus 104 ~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
++++|+++.++.+++..++++++|+++|+++... +.+... . .+.+++......... .........
T Consensus 164 av~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~ 242 (652)
T TIGR01217 164 AIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRET-EAPKIDGAL 242 (652)
T ss_pred eEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccc-ccccccCcc
Confidence 9999999999999999999999999999987532 222211 1 122222111000000 000011234
Q ss_pred chhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHH-HHHhhhhhccCCCcEEEecchHHHHH
Q 013850 170 SFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASL-MISAHQELVGELDHVVLCVLPMFHVF 248 (435)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~~~d~~l~~~~l~~~~ 248 (435)
.++++...... .........++++++|+|||||||.||||+++|.+++.... .......+ ..+|++++.+++.|++
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~ 319 (652)
T TIGR01217 243 DLEDFTAAAQA-AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDL--GPGDRLFYYTTTGWMM 319 (652)
T ss_pred cHHHHHhcccC-CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCC--CCCcEEEEeCCcchhh
Confidence 45665543211 12223345678999999999999999999999998764322 22222223 3349999999999986
Q ss_pred HHHHHHHhhhhcCcEEEecCC----CCHHHHHHHHHhcCceEEEecHHHHHHHHhccc--ccCCCCcceeEEEecCCCCc
Q 013850 249 GLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLG 322 (435)
Q Consensus 249 g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~i~~gG~~l~ 322 (435)
.. .++.+|..|+++++.+. .++..++++++++++|++..+|.++..|.+... ....++++||.+++||++++
T Consensus 320 ~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~ 397 (652)
T TIGR01217 320 WN--WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLP 397 (652)
T ss_pred hH--HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCC
Confidence 43 35689999999999852 278899999999999999888888877765421 23467899999999999999
Q ss_pred HHHHHHHHhhCC-CCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCC--
Q 013850 323 KELMEDCQKNIP-GATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP-- 399 (435)
Q Consensus 323 ~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~-- 399 (435)
+++.+++.+.++ +..+.+.||+||+++......+.. ....+++|.|.+|++++|+| ++|+++ +|+.|||+++||
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~-~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v~gp~p 474 (652)
T TIGR01217 398 PDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTL-PVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVCTNPMP 474 (652)
T ss_pred HHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCC-CCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEEecCCC
Confidence 999999999886 356789999999754433222221 33567899999999999999 578888 599999999996
Q ss_pred CccccccccCCcccccccccccc-cCcceecCCCCC
Q 013850 400 NVTPGIVYINFFVFTLFLWGCEH-TDSFIRGKDQQT 434 (435)
Q Consensus 400 ~~~~g~~y~~~~~~~~~~~~~~~-~~~~~~tgD~~~ 434 (435)
+++.| ||++++.+...-.++. .+||++|||+++
T Consensus 475 ~~~~g--y~~~~~~t~~~~~~~~~~~g~~~tGDlg~ 508 (652)
T TIGR01217 475 SMPIR--FWNDPDGSKYRDAYFDTYPGVWRHGDWIT 508 (652)
T ss_pred ccccc--eeCCCccchhHHhhhcCCCCEEEcCCcEE
Confidence 68999 9999987652222232 257888899864
No 89
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-49 Score=390.09 Aligned_cols=371 Identities=19% Similarity=0.215 Sum_probs=301.6
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
.|+.++|.+.+. ++++|++.. ++.+||.||.++++++|++|+++ |++++++|+++++|+++++++++||+++|++
T Consensus 5 ~~~~~~l~~~a~--~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~ 80 (529)
T PRK07867 5 PTVAELLLPLAE--DDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIV 80 (529)
T ss_pred ccHHHHHHHhcc--cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCE
Confidence 688999988774 789999876 48999999999999999999986 8999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCC
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIP 185 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (435)
++|+++.++.+++..+++.++++++|++++....+........++..+ ...+.+++..... ....
T Consensus 81 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~~~-~~~~ 145 (529)
T PRK07867 81 PVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVD--------------SPAWADELAAHRD-AEPP 145 (529)
T ss_pred EEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEec--------------cccHHHHhcccCC-CCCC
Confidence 999999999999999999999999999988776555432111221111 0123333322111 1122
Q ss_pred CCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEE
Q 013850 186 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (435)
Q Consensus 186 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~ 265 (435)
.....++++++|+|||||||.||+|.++|+++..........+.+. ..|++++.+|++|.+++...++.++..|++++
T Consensus 146 ~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~--~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 223 (529)
T PRK07867 146 FRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLG--PDDVCYVSMPLFHSNAVMAGWAVALAAGASIA 223 (529)
T ss_pred cccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCC--cccEEEEecchhHHHHHHHHHHHHHhcCceEE
Confidence 3345789999999999999999999999999988766655554443 34999999999999999777888999999999
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcc
Q 013850 266 SMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMT 345 (435)
Q Consensus 266 ~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~t 345 (435)
+.+.+++..+++.++++++|++.++|+.+..++..........+++|. ++||+.+++.+ .+|.+.++ +++++.||+|
T Consensus 224 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~g-~~l~~~YG~T 300 (529)
T PRK07867 224 LRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRFG-CVVVDGFGST 300 (529)
T ss_pred ecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHhC-CcEEEeeccc
Confidence 998899999999999999999999999999988765433334467885 46888887664 67778886 9999999999
Q ss_pred cccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCC------------ceeEEE-eCCCccccccccCCcc
Q 013850 346 ETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQ------------LGEIWV-RGPNVTPGIVYINFFV 412 (435)
Q Consensus 346 E~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~------------~Gei~v-~g~~~~~g~~y~~~~~ 412 (435)
|++..+.... ....+++|.|+++ ++++|++++.+++.|+ .|||++ +|++++.| ||++++
T Consensus 301 E~~~~~~~~~----~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~g--y~~~~~ 372 (529)
T PRK07867 301 EGGVAITRTP----DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEG--YYNDPE 372 (529)
T ss_pred ccccccccCC----CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCccccc--ccCChH
Confidence 9886554321 2345789999998 7788877889999988 999998 99999999 999999
Q ss_pred cccccccccccCcceecCCCC
Q 013850 413 FTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 413 ~~~~~~~~~~~~~~~~tgD~~ 433 (435)
.+.+.+ .+|||+|||++
T Consensus 373 ~~~~~~----~~g~~~TGD~~ 389 (529)
T PRK07867 373 ADAERM----RGGVYWSGDLA 389 (529)
T ss_pred hhhhhh----cCCeEeeccEE
Confidence 998877 46788888875
No 90
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.1e-49 Score=391.89 Aligned_cols=389 Identities=20% Similarity=0.248 Sum_probs=304.3
Q ss_pred CchHHHHHhhcccCCCceeeeecCCC--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
.++.++|.+.++.+|++.++.+...+ +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~ 89 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGA 89 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 57899999999999999888754222 6799999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCcccccccccccccccchhhhhhhcC
Q 013850 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 179 (435)
Q Consensus 105 ~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (435)
+++|++|.++.+++..+++.++++++++++++.+.+.... ...++...+... .. .......+++++.....
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~l~~~~~ 165 (539)
T PRK07008 90 VCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAH--LP--AGSTPLLCYETLVGAQD 165 (539)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCc--cc--cCCcccccHHHHhcccC
Confidence 9999999999999999999999999999987766554332 111121111110 00 01122445666554332
Q ss_pred CCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhh
Q 013850 180 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (435)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~ 259 (435)
.........++++++++|||||||.||+|.+||+++............+....+|+++...|++|.+++. .++.++.
T Consensus 166 --~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~-~~~~~l~ 242 (539)
T PRK07008 166 --GDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWG-LPYSAPL 242 (539)
T ss_pred --CCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHH-HHHHHHh
Confidence 2222345567899999999999999999999999986543221111112223349999999999988774 5677889
Q ss_pred cCcEEEec-CCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCee
Q 013850 260 KGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATI 338 (435)
Q Consensus 260 ~G~~i~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~ 338 (435)
.|+++++. +.+++..+++.++++++|++.++|+++..|++.......++++||.++++|+++++++.+++++.++ .++
T Consensus 243 ~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~l 321 (539)
T PRK07008 243 TGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEYG-VEV 321 (539)
T ss_pred cCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHhC-Cce
Confidence 99999987 4578999999999999999999999999999887666678899999999999999999999999996 999
Q ss_pred ecCcCcccccccccccCCCC---------CCcCCCCcccccCCcEEEEEeCCCCccCCCC--CceeEEEeCCCccccccc
Q 013850 339 FQGYGMTETCAPISLENPLV---------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPN--QLGEIWVRGPNVTPGIVY 407 (435)
Q Consensus 339 ~~~yG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gei~v~g~~~~~g~~y 407 (435)
++.||+||++..+....... ......++|+|+|+++++|+| +++..++.+ +.|||+++|+.++.| |
T Consensus 322 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~g--y 398 (539)
T PRK07008 322 IHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDR--Y 398 (539)
T ss_pred ecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchh--h
Confidence 99999999987554332110 011246789999999999999 477777753 579999999999999 9
Q ss_pred cCCcccccccccccccCcceecCCCC
Q 013850 408 INFFVFTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~tgD~~ 433 (435)
|++++. .+ .+|||+|||++
T Consensus 399 ~~~~~~---~~----~~g~~~TGD~~ 417 (539)
T PRK07008 399 FRGDAS---PL----VDGWFPTGDVA 417 (539)
T ss_pred cCChhh---hh----cCCCcccCceE
Confidence 998842 22 14678888765
No 91
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1e-49 Score=466.72 Aligned_cols=383 Identities=16% Similarity=0.217 Sum_probs=315.6
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.++|.++++++|+++|+++.+ ..+||+||.++++++|+.|++.|+++|++|+|++++++++++++||++++|+++
T Consensus 3720 ~~~~~~~~~~~~~~p~~~Av~~~~--~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~ 3797 (4334)
T PRK05691 3720 QSYVRLFEAQVAAHPQRIAASCLD--QQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGY 3797 (4334)
T ss_pred cCHHHHHHHHHHhCCCceEEEcCC--CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEE
Confidence 689999999999999999999884 789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|++|.++.+++.++++.++++++++++................. ......+++....... ...+.
T Consensus 3798 vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~-~~~~~ 3863 (4334)
T PRK05691 3798 LPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCAN-------------RPRLLVWEEVQAGEVA-SHNPG 3863 (4334)
T ss_pred eCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhccccccc-------------ccceeeeccccccccc-ccCCC
Confidence 999999999999999999999999999875443222211000000 0000001111110100 11223
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....+++++||+|||||||.||||+++|+++.+.+.+......+... ++++...++++..+++ .++.++..|+++++
T Consensus 3864 ~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~fd~s~~-~~~~~l~~G~~l~i 3940 (4334)
T PRK05691 3864 IYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEA--DVIAQTASQSFDISVW-QFLAAPLFGARVEI 3940 (4334)
T ss_pred CCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCcc--ceEEEecCCchhHHHH-HHHHHHhCCCEEEE
Confidence 44578999999999999999999999999999998776665555433 9999999999999985 88999999999999
Q ss_pred cCC---CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcC
Q 013850 267 MGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYG 343 (435)
Q Consensus 267 ~~~---~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG 343 (435)
.+. .++..+++.++++++|++.++|+++..|+... ...+++||.+++|||++++++.++|.+.+++++++|.||
T Consensus 3941 ~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 4017 (4334)
T PRK05691 3941 VPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYG 4017 (4334)
T ss_pred cCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCcc
Confidence 853 57899999999999999999999999987643 235789999999999999999999999988899999999
Q ss_pred cccccccccccCCCCC--CcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccc--c
Q 013850 344 MTETCAPISLENPLVG--VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW--G 419 (435)
Q Consensus 344 ~tE~~~~~~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~--~ 419 (435)
+||++..++....... .....++|+|++|+++.|+| +.+++++.|.+|||+|+|++++.| |+++|+.|.++| .
T Consensus 4018 ~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~G--Y~~~~~~t~~~f~~~ 4094 (4334)
T PRK05691 4018 PAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRG--YVGDPLRTALAFVPH 4094 (4334)
T ss_pred CccceeEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEeccccccc--ccCCcccchhhcccC
Confidence 9999876654322211 22345799999999999999 789999999999999999999999 999999999998 1
Q ss_pred cc--ccCcceecCCCCC
Q 013850 420 CE--HTDSFIRGKDQQT 434 (435)
Q Consensus 420 ~~--~~~~~~~tgD~~~ 434 (435)
-+ ..++||||||+++
T Consensus 4095 p~~~~~~~~yrTGDl~~ 4111 (4334)
T PRK05691 4095 PFGAPGERLYRTGDLAR 4111 (4334)
T ss_pred CCCCCCceeeccCccee
Confidence 11 2457999999985
No 92
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=8.3e-49 Score=391.97 Aligned_cols=396 Identities=23% Similarity=0.365 Sum_probs=311.7
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~-~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
.++.+.|.+++.++|+++|+++. ++.+||.||.+++.++|+.|+ +.|+++||+|+++++|++++++++|||+++|++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 102 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLT 102 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeE
Confidence 47899999999999999999976 589999999999999999997 689999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CCcEEeccC-Cc---ccc------------ccccccc
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSK-DK---VSS------------SGLISRS 165 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~-~~---~~~------------~~~~~~~ 165 (435)
++|++|.++.+++..+++.++++++++++.....+.... ...+++... .. ... .......
T Consensus 103 ~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (560)
T PRK08751 103 VVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRI 182 (560)
T ss_pred EeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccCC
Confidence 999999999999999999999999999987765544322 111221110 00 000 0000000
Q ss_pred ccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhc---cCCCcEEEecc
Q 013850 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV---GELDHVVLCVL 242 (435)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~---~~~~d~~l~~~ 242 (435)
.....+.+....... .........++++++++|||||||.||+|.++|.++.............. ...++++++..
T Consensus 183 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (560)
T PRK08751 183 NGAIRFREALALGRK-HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITAL 261 (560)
T ss_pred CccccHHHHHhccCC-CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEec
Confidence 111223333322211 11223445778999999999999999999999999987765543332221 11226788889
Q ss_pred hHHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCC
Q 013850 243 PMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPL 321 (435)
Q Consensus 243 ~l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l 321 (435)
|++|.+++....+.++..|++.++. ..+++..+++.++++++|++.++|.++..+.+.......++++||.+++||+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~ 341 (560)
T PRK08751 262 PLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAV 341 (560)
T ss_pred ChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCC
Confidence 9999999865566677777776655 467899999999999999999999999999987666666788999999999999
Q ss_pred cHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCc
Q 013850 322 GKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNV 401 (435)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~ 401 (435)
++.+.+.|++.++ +++++.||+||++..+...... .....+++|.|.++++++|+| +++..++.|+.|||+++|+.+
T Consensus 342 ~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~~~~~ 418 (560)
T PRK08751 342 QRSVAERWKQVTG-LTLVEAYGLTETSPAACINPLT-LKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGELCIKGPQV 418 (560)
T ss_pred CHHHHHHHHHHhC-CeEEEeeccccCCCceeccccc-ccccCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCcc
Confidence 9999999999886 8999999999998766544322 234567899999999999999 688999999999999999999
Q ss_pred cccccccCCcccccccccccccCcceecCCCC
Q 013850 402 TPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 402 ~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~ 433 (435)
+.| ||++++.+.+.+ +.+|||+|||++
T Consensus 419 ~~g--y~~~~~~~~~~~---~~~g~~~TGD~~ 445 (560)
T PRK08751 419 MKG--YWKRPEETAKVM---DADGWLHTGDIA 445 (560)
T ss_pred chh--hcCChhhhhhcc---ccCCCccccceE
Confidence 999 999999988765 356899999976
No 93
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-49 Score=396.01 Aligned_cols=388 Identities=19% Similarity=0.265 Sum_probs=302.6
Q ss_pred CCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcC
Q 013850 24 DPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (435)
Q Consensus 24 ~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 103 (435)
....|+.+.|.++++++|+++|+++. ++.+||.||.++++++|+.|++.|+++||+|+++++|+.+++++++||+++|
T Consensus 34 ~~~~tl~~~l~~~a~~~p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G 111 (600)
T PRK08279 34 DSKRSLGDVFEEAAARHPDRPALLFE--DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLG 111 (600)
T ss_pred CCcccHHHHHHHHHHhCCCCcEEEeC--CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 34479999999999999999999987 4899999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCC-----CcEEeccCCcccccccccccccccchhhhhhhc
Q 013850 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELS 178 (435)
Q Consensus 104 ~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (435)
++++|+++.++.+++..+++.++++++|++++..+.+..... ..++...+... . ....+.++....
T Consensus 112 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~ 182 (600)
T PRK08279 112 AVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTL------D---DPEGYEDLAAAA 182 (600)
T ss_pred cEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccc------c---ccccHHHHhhhc
Confidence 999999999999999999999999999999887766544321 11222111000 0 011222222211
Q ss_pred CCC-C--CCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHH
Q 013850 179 GSV-T--DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILY 255 (435)
Q Consensus 179 ~~~-~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~ 255 (435)
... . ........++++++|+|||||||.||+|.++|+++...+........+.. +|++++.+|++|.+++...++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~--~d~~l~~~pl~h~~g~~~~~~ 260 (600)
T PRK08279 183 AGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTP--DDVLYCCLPLYHNTGGTVAWS 260 (600)
T ss_pred ccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCC--CcEEEEecCchhhhhHHHHHH
Confidence 110 1 11223456789999999999999999999999999998777655544433 399999999999999987778
Q ss_pred hhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCC
Q 013850 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG 335 (435)
Q Consensus 256 ~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~ 335 (435)
.++..|+++++.+.+++..+++.++++++|++.++|++++.+++..........++|.+ +|+.+++++.++|.+.++.
T Consensus 261 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~ 338 (600)
T PRK08279 261 SVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGI 338 (600)
T ss_pred HHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCc
Confidence 88999999999999999999999999999999999999999988755444456677764 4677999999999999985
Q ss_pred CeeecCcCcccccccccccCCCCCCcCCCCcccccC----CcEE---------EEEeCCC-CccCCCCCceeEE--EeCC
Q 013850 336 ATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVA----GVEA---------QIVSVDT-LKPLPPNQLGEIW--VRGP 399 (435)
Q Consensus 336 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~----~~~~---------~i~d~~~-~~~~~~g~~Gei~--v~g~ 399 (435)
..+++.||+||++...... ....+++|.+.+ +..+ .+.+.+. ...+++|+.|||+ ++|+
T Consensus 339 ~~l~~~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~ 413 (600)
T PRK08279 339 PRILEFYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDR 413 (600)
T ss_pred ceeeeeecccccceeeccc-----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCc
Confidence 6799999999987533221 234567776655 3333 2333111 1357889999998 7899
Q ss_pred CccccccccCCcccccccc--c-ccccCcceecCCCCC
Q 013850 400 NVTPGIVYINFFVFTLFLW--G-CEHTDSFIRGKDQQT 434 (435)
Q Consensus 400 ~~~~g~~y~~~~~~~~~~~--~-~~~~~~~~~tgD~~~ 434 (435)
+++.| | ++++.+.+.+ . +...++||+|||+++
T Consensus 414 ~~~~G--Y-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~ 448 (600)
T PRK08279 414 GPFDG--Y-TDPEASEKKILRDVFKKGDAWFNTGDLMR 448 (600)
T ss_pred ccccc--c-CCchhhHHHHhhcccCCCCceEeecceEE
Confidence 99999 9 8898887765 1 123468999999874
No 94
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.4e-49 Score=389.73 Aligned_cols=394 Identities=21% Similarity=0.268 Sum_probs=305.5
Q ss_pred CCCCCCCchHHHHHhhcccCCCceeeeecCCC--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHH
Q 013850 21 LPSDPSFSMVHFLFRNSASYSSKLALIDADSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLG 98 (435)
Q Consensus 21 ~~~~~~~tl~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA 98 (435)
++...++|+.++|.++++++|++++++....+ +.+||.||.++++++|++|++.|+++||+|+++++|+++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la 83 (542)
T PRK06018 4 LMQDWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYG 83 (542)
T ss_pred hhhcCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 45556689999999999999999999853223 6899999999999999999999999999999999999999999999
Q ss_pred HHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC-----CCcEEeccCCcccccccccccccccchhh
Q 013850 99 VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHD 173 (435)
Q Consensus 99 ~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (435)
|+++|++++|+++.++.+++..+++.++++.++++.+..+.+.... .+.+++..+... ...........+.+
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 160 (542)
T PRK06018 84 IMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAH---MPQTTLKNAVAYEE 160 (542)
T ss_pred HHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEeccccc---ccccCccccccHHH
Confidence 9999999999999999999999999999999999987766554322 122222211100 00011112334555
Q ss_pred hhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHH--HHHhhhhhccCCCcEEEecchHHHHHHHH
Q 013850 174 LIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASL--MISAHQELVGELDHVVLCVLPMFHVFGLS 251 (435)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~--~~~~~~~~~~~~~d~~l~~~~l~~~~g~~ 251 (435)
++.... .........++++++|+|||||||.||+|.+||++.+.... .......+ ..+|+++...|++|.+++.
T Consensus 161 ~~~~~~--~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~p~~h~~~~~ 236 (542)
T PRK06018 161 WIAEAD--GDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGT--SAADTMLPVVPLFHANSWG 236 (542)
T ss_pred HhccCC--cccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCC--CCCCEEEEecCHHHHhhhH
Confidence 544332 22223445678899999999999999999999997532211 11112222 3339999999999999885
Q ss_pred HHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHH
Q 013850 252 VILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQ 330 (435)
Q Consensus 252 ~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~ 330 (435)
..+.++..|+++++.. .+++..+++.++++++|++.++|+++..|.+.......++++||.++++|+++++++.++|+
T Consensus 237 -~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~ 315 (542)
T PRK06018 237 -IAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFE 315 (542)
T ss_pred -HHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHH
Confidence 5567889999998874 57899999999999999999999999999987766666789999999999999999999999
Q ss_pred hhCCCCeeecCcCcccccccccccCCCCC---------CcCCCCcccccCCcEEEEEeCCCCccCCCC--CceeEEEeCC
Q 013850 331 KNIPGATIFQGYGMTETCAPISLENPLVG---------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPN--QLGEIWVRGP 399 (435)
Q Consensus 331 ~~~~~~~~~~~yG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gei~v~g~ 399 (435)
+ ++ +++++.||+||++.++......+. .....++|+|.++++++|+|+ +++.++.+ ..|||+++|+
T Consensus 316 ~-~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~-~~~~~~~~~~~~Gel~i~g~ 392 (542)
T PRK06018 316 D-MG-VEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDD-AGKELPWDGKTFGRLKVRGP 392 (542)
T ss_pred H-hC-CCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECC-CCCCCCCCCCceeEEEEecC
Confidence 9 75 999999999999876554321110 012357899999999999994 77777653 6899999999
Q ss_pred CccccccccCCcccccccccccccCcceecCCCC
Q 013850 400 NVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 400 ~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~ 433 (435)
+++.| ||++.. . .++.++||+|||++
T Consensus 393 ~~~~g--y~~~~~---~---~~~~~~~~~TGDl~ 418 (542)
T PRK06018 393 AVAAA--YYRVDG---E---ILDDDGFFDTGDVA 418 (542)
T ss_pred Ccchh--hhcCcc---c---EecCCcEEEcCCEE
Confidence 99999 998322 2 22356789999875
No 95
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=4.8e-49 Score=389.10 Aligned_cols=377 Identities=19% Similarity=0.230 Sum_probs=310.0
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
+++.+.|.++++.+|+++++... +..+||.||.+.++++|..|.+.|+++|++|+++++|+.+++++++||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~ 79 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL--GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAY 79 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 46889999999999999999876 4799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcC-CCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG-SVTDIP 185 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 185 (435)
+|+++.++.+++..+++..+++++++++..... ...... ..++++..... ......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-------------------~~~~~~~~~~~~~~~~~~ 136 (503)
T PRK04813 80 IPVDVSSPAERIEMIIEVAKPSLIIATEELPLE----ILGIPV-------------------ITLDELKDIFATGNPYDF 136 (503)
T ss_pred ecCCCCChHHHHHHHHHhcCCCEEEeccccccc----ccCCcE-------------------EehHHhhhhhhccccccc
Confidence 999999999999999999999999998765110 000000 11111111100 001112
Q ss_pred CCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEE
Q 013850 186 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (435)
Q Consensus 186 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~ 265 (435)
.....++++++++|||||||.||+|.++|+++...+.+......+. ..++++...|++|..++. .++.++..|++++
T Consensus 137 ~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~v 213 (503)
T PRK04813 137 DHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALP--EGPQFLNQAPYSFDLSVM-DLYPTLASGGTLV 213 (503)
T ss_pred cccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCC--cCceeeecCCcchhHhHH-HHHHHHhcCCEEE
Confidence 3345678899999999999999999999999998877665554443 338999999999999884 7789999999999
Q ss_pred ecCC---CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCc
Q 013850 266 SMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 342 (435)
Q Consensus 266 ~~~~---~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~y 342 (435)
+.+. .++..+++.++++++|++.++|+++..+..........++++|.++++|+++++.+.+++.+.+++.++++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~y 293 (503)
T PRK04813 214 ALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTY 293 (503)
T ss_pred EcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCc
Confidence 8864 4889999999999999999999999887766555566788999999999999999999999999879999999
Q ss_pred CcccccccccccCCCC---CCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc
Q 013850 343 GMTETCAPISLENPLV---GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 419 (435)
Q Consensus 343 G~tE~~~~~~~~~~~~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~ 419 (435)
|+||++..+....... ......++|++.++++++|+| +++.+++.|+.|||+++|+.++.| ||++++.+...|-
T Consensus 294 G~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~~ 370 (503)
T PRK04813 294 GPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKG--YLNNPEKTAEAFF 370 (503)
T ss_pred ccchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccc--cCCChhHhHHhhc
Confidence 9999876554322211 123456799999999999999 689999999999999999999999 9999999988663
Q ss_pred ccccCcceecCCCCC
Q 013850 420 CEHTDSFIRGKDQQT 434 (435)
Q Consensus 420 ~~~~~~~~~tgD~~~ 434 (435)
..+..+||+|||+++
T Consensus 371 ~~~g~~~~~tGD~~~ 385 (503)
T PRK04813 371 TFDGQPAYHTGDAGY 385 (503)
T ss_pred cCCCceeEECCceEE
Confidence 223346999999763
No 96
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.6e-48 Score=389.83 Aligned_cols=393 Identities=19% Similarity=0.269 Sum_probs=299.4
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.|+...+.+.++.+|+++|+++. +..+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~ 97 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHG--SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVV 97 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEE
Confidence 67899999999999999999986 4789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhc------------CCCcEEeccCCccccc-ccccccccccchhh
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL------------NLPAVLLGSKDKVSSS-GLISRSSKIVSFHD 173 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 173 (435)
+|+++..+.+++..+++.++++++++++.+.+.+... ....+++......... .......+...+.+
T Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (567)
T PLN02479 98 NCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEK 177 (567)
T ss_pred EEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHHH
Confidence 9999999999999999999999999998765543221 1112222211110000 00001123334555
Q ss_pred hhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHH
Q 013850 174 LIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVI 253 (435)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~ 253 (435)
++..... ..........++.++++|||||||.||+|.++|+++..........+.+ ..++++++.+|++|.+++...
T Consensus 178 ~~~~~~~-~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~h~~~~~~~ 254 (567)
T PLN02479 178 FLETGDP-EFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGM--NEGAVYLWTLPMFHCNGWCFT 254 (567)
T ss_pred HHhcccc-ccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCC--CCCCEEEEecchhhhhhHHHH
Confidence 5543221 1111122334567889999999999999999999987654443333333 334899999999999998644
Q ss_pred HHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccC-CCCcceeEEEecCCCCcHHHHHHHHhh
Q 013850 254 LYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK-FDISSLKLVGSGAAPLGKELMEDCQKN 332 (435)
Q Consensus 254 ~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~-~~l~~lr~i~~gG~~l~~~~~~~~~~~ 332 (435)
+...+..|.++++ ..+++..+++.++++++|++.++|+++..|.+...... ..++++|.++++|+++++.+.++|.+.
T Consensus 255 ~~~~~~~g~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~ 333 (567)
T PLN02479 255 WTLAALCGTNICL-RQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSEK 333 (567)
T ss_pred HHHHhhcCceEec-cCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHHhc
Confidence 4455666666554 56899999999999999999999999999987654333 257899999999999999999999876
Q ss_pred CCCCeeecCcCcccccccccccCCC--------CC-CcCCCCcccccCCcE-EEEEeCCCCccCCCC--CceeEEEeCCC
Q 013850 333 IPGATIFQGYGMTETCAPISLENPL--------VG-VRRSGSAGTLVAGVE-AQIVSVDTLKPLPPN--QLGEIWVRGPN 400 (435)
Q Consensus 333 ~~~~~~~~~yG~tE~~~~~~~~~~~--------~~-~~~~~~~G~~~~~~~-~~i~d~~~~~~~~~g--~~Gei~v~g~~ 400 (435)
+.++++.||+||+++.+...... .. .......|.+.+++. ++|+|++++.+++.+ +.|||+++|++
T Consensus 334 --~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~ 411 (567)
T PLN02479 334 --GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNM 411 (567)
T ss_pred --CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccc
Confidence 48999999999986544322100 00 011235688888876 889997788888764 68999999999
Q ss_pred ccccccccCCcccccccccccccCcceecCCCC
Q 013850 401 VTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 401 ~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~ 433 (435)
++.| ||++++.+.+.| .++||+|||++
T Consensus 412 ~~~G--Y~~~~~~t~~~~----~~g~~~TGDl~ 438 (567)
T PLN02479 412 VMKG--YLKNPKANEEAF----ANGWFHSGDLG 438 (567)
T ss_pred hhhh--hhcCcccccchh----cCCceecceeE
Confidence 9999 999999999988 36799999976
No 97
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-48 Score=386.69 Aligned_cols=396 Identities=27% Similarity=0.409 Sum_probs=311.3
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
.++.++|.++++++|+++|+++. +..+||.||.++++++|..|++ .|+++||+|+++++|++++++++|||+++|++
T Consensus 23 ~~l~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 100 (560)
T PRK08974 23 QSLVDMFEQAVARYADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMI 100 (560)
T ss_pred ccHHHHHHHHHHhCCCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 57999999999999999999976 5899999999999999999984 89999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CCcEEeccCCcc-cccc---------------ccccc
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKV-SSSG---------------LISRS 165 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~---------------~~~~~ 165 (435)
++|++|.++.+++.++++.++++.++++++..+.+.... ...++....... .... .....
T Consensus 101 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08974 101 VVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL 180 (560)
T ss_pred EeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccccC
Confidence 999999999999999999999999999876555443321 111111110000 0000 00000
Q ss_pred ccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhh-hccCCCcEEEecchH
Q 013850 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE-LVGELDHVVLCVLPM 244 (435)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~~l 244 (435)
.....+.+....... .........++++++|+|||||||.||+|.++|.++............ .....++.++..+|+
T Consensus 181 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 259 (560)
T PRK08974 181 PDAISFRSALHKGRR-MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPL 259 (560)
T ss_pred CCcccHHHHhhccCC-CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcH
Confidence 011122222221110 112223356889999999999999999999999999876544332222 112333788899999
Q ss_pred HHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcH
Q 013850 245 FHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGK 323 (435)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~ 323 (435)
+|.+++....+.++..|+++++. +..++..+++.++++++|++.++|+++..|.+.......+++++|.+++||+++++
T Consensus 260 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~ 339 (560)
T PRK08974 260 YHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQ 339 (560)
T ss_pred HHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCH
Confidence 99999876677788889887766 45688999999999999999999999999998766666678899999999999999
Q ss_pred HHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccc
Q 013850 324 ELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTP 403 (435)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~ 403 (435)
.+.++|++.++ +++++.||+||++..+...... .....+++|.|+++++++|+| +++..++.|+.|||+++|+.++.
T Consensus 340 ~~~~~~~~~~g-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~ 416 (560)
T PRK08974 340 AVAERWVKLTG-QYLLEGYGLTECSPLVSVNPYD-LDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGPQVML 416 (560)
T ss_pred HHHHHHHHHhC-CcEEeeecccccCceeeccCCC-CcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecCCcch
Confidence 99999999886 9999999999988776654332 134467899999999999999 47899999999999999999999
Q ss_pred cccccCCcccccccccccccCcceecCCCCC
Q 013850 404 GIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 404 g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
| |+++++.+...| .++||+|||+++
T Consensus 417 g--y~~~~~~~~~~~----~~g~~~TGDl~~ 441 (560)
T PRK08974 417 G--YWQRPEATDEVI----KDGWLATGDIAV 441 (560)
T ss_pred h--hcCChhhhhhhh----hcCCcccCCEEE
Confidence 9 999999988766 467999999764
No 98
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=4.8e-49 Score=460.98 Aligned_cols=377 Identities=20% Similarity=0.296 Sum_probs=315.4
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.++|.++++++|+++|+++.+ ..+||+||.++++++|+.|++.|+++|++|++++++++++++++||++++|+++
T Consensus 1131 ~~l~~~~~~~a~~~p~~~Al~~~~--~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~ 1208 (4334)
T PRK05691 1131 AWLPELLNEQARQTPERIALVWDG--GSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAY 1208 (4334)
T ss_pred CCHHHHHHHHHHhCCCCeEEEECC--ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 689999999999999999999874 789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|++|.++.+++.++++.++++++|++......+..... ...+..+. ...... . ...+.
T Consensus 1209 vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~--------------~~~~~~----~--~~~~~ 1267 (4334)
T PRK05691 1209 VPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEG-VSAIALDS--------------LHLDSW----P--SQAPG 1267 (4334)
T ss_pred EecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccC-ceEEeecc--------------cccccc----C--CCCCC
Confidence 999999999999999999999999999876554433211 11111100 000000 0 11122
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....++++++|+|||||||.||||.++|+++.+.+.+......+.. ++++++..|++|..++. .++.+|..|+++++
T Consensus 1268 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~fd~s~~-~~~~~L~~G~~l~i 1344 (4334)
T PRK05691 1268 LHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDD--SDVLMQKAPISFDVSVW-ECFWPLITGCRLVL 1344 (4334)
T ss_pred CCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCC--CCEEEEeCCccHHHHHH-HHHHHHhCCCEEEE
Confidence 3456899999999999999999999999999988776655555433 39999999999999885 88999999999999
Q ss_pred cC---CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcC
Q 013850 267 MG---KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYG 343 (435)
Q Consensus 267 ~~---~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG 343 (435)
.+ ..++..+++.++++++|++.++|+++..|.+... ...+++||.+++|||++++++.++|.+.+++++++|.||
T Consensus 1345 ~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 1422 (4334)
T PRK05691 1345 AGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYG 1422 (4334)
T ss_pred cCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCC
Confidence 85 3689999999999999999999999999987532 346789999999999999999999999998899999999
Q ss_pred cccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccc--cc
Q 013850 344 MTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG--CE 421 (435)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~--~~ 421 (435)
+||++..++............++|+|+++++++|+| +++++++.|++|||+|+|++++.| |+++|+.|.+.|. .+
T Consensus 1423 ~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~G--Yl~~p~~t~~~f~~~p~ 1499 (4334)
T PRK05691 1423 PTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARG--YLGRPALTAERFVPDPL 1499 (4334)
T ss_pred cChheeeeeeeecccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchh--hcCCccccHhhCCCCCC
Confidence 999887665432222234567899999999999999 589999999999999999999999 9999999999882 11
Q ss_pred --ccCcceecCCCCC
Q 013850 422 --HTDSFIRGKDQQT 434 (435)
Q Consensus 422 --~~~~~~~tgD~~~ 434 (435)
..++||+|||+++
T Consensus 1500 ~~~~~r~yrTGDl~~ 1514 (4334)
T PRK05691 1500 GEDGARLYRTGDRAR 1514 (4334)
T ss_pred CCCCceEEEccceEE
Confidence 1236999999874
No 99
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-48 Score=385.25 Aligned_cols=377 Identities=22% Similarity=0.264 Sum_probs=289.8
Q ss_pred hhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCC
Q 013850 35 RNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT 114 (435)
Q Consensus 35 ~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~ 114 (435)
.+++.+|+++|+++.+.++.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 46678999999987655689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEccccHHHHhhcCCCc-EEeccCCcccccccccccccccchhhhhhhcCCCCCCCCCCCCCCC
Q 013850 115 VSELSKQVKDSNPKLVITVPELWDKVKDLNLPA-VLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTD 193 (435)
Q Consensus 115 ~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (435)
.+++..+++.++++.+++++............. ..+.... .......+++...... +......+
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~------~~~~~~~~ 149 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGG---------EIDGFGSFEAALAGAG------PRLTEQPC 149 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecC---------cccccccHHHHhcccC------CCCCCCcc
Confidence 999999999999999999876543322221110 0111000 0011112222221110 01112235
Q ss_pred EEEEEeCCCCCCCccceee--ccHHHHHHHHHHH--hhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCC
Q 013850 194 AAALLYSSGTTGVSKGVIL--THKNFIAASLMIS--AHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK 269 (435)
Q Consensus 194 ~~~i~~TSGtTG~pK~v~~--t~~~l~~~~~~~~--~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~ 269 (435)
.++|+|||||||.||+|.+ +|.++........ ....+.....+++++.+|++|..++. .....+..|+++++.+.
T Consensus 150 ~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~-~~~~~~~~g~~~~~~~~ 228 (501)
T PRK13390 150 GAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLR-WCSMVHALGGTVVLAKR 228 (501)
T ss_pred cEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHH-HHHHHHhcCceEEEcCC
Confidence 7999999999999999995 4555443211110 11112223349999999999999875 33445678999999988
Q ss_pred CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc--cCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccc
Q 013850 270 FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTET 347 (435)
Q Consensus 270 ~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~ 347 (435)
+++..+++.|+++++|++.++|+++..|.+.... ...+++++|.++.||+++++++.+.+++.++ .++++.||+||+
T Consensus 229 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~-~~~~~~YG~tE~ 307 (501)
T PRK13390 229 FDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLG-PIVYEYYSSTEA 307 (501)
T ss_pred cCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcC-Cceeeeeccccc
Confidence 9999999999999999999999999999875432 3456789999999999999999999999886 899999999999
Q ss_pred cccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcce
Q 013850 348 CAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFI 427 (435)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~ 427 (435)
+++....... .....+++|+|+++ .++|+| ++++++++|+.|||+++|++++.| ||++++.+.+.+. ...++|+
T Consensus 308 ~~~~~~~~~~-~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~t~~~~~-~~~~~w~ 381 (501)
T PRK13390 308 HGMTFIDSPD-WLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFR--YLNDPEKTAAAQH-PAHPFWT 381 (501)
T ss_pred CceEEecchh-hccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCcccc--ccCChhhhHHhhc-cCCCceE
Confidence 8755433222 13456789999999 799999 689999999999999999999999 9999999988662 1125799
Q ss_pred ecCCCCC
Q 013850 428 RGKDQQT 434 (435)
Q Consensus 428 ~tgD~~~ 434 (435)
+|||+++
T Consensus 382 ~tGDl~~ 388 (501)
T PRK13390 382 TVGDLGS 388 (501)
T ss_pred EcCceEE
Confidence 9998763
No 100
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-48 Score=379.28 Aligned_cols=348 Identities=25% Similarity=0.300 Sum_probs=287.5
Q ss_pred cccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHH
Q 013850 37 SASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVS 116 (435)
Q Consensus 37 ~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~ 116 (435)
+++.++++|+++. ++.+||.||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|+++..+.+
T Consensus 10 ~~~~~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~ 82 (471)
T PRK07787 10 AAAADIADAVRIG--GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVA 82 (471)
T ss_pred hcccCCceEEEeC--CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChH
Confidence 4677889999886 489999999999999999985 479999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCCCCCCCCEEE
Q 013850 117 ELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 196 (435)
Q Consensus 117 ~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (435)
++..+++.+++++++++++... ... ....... ... .........++++++
T Consensus 83 ~l~~~l~~~~~~~il~~~~~~~--~~~--~~~~~~~--------------~~~------------~~~~~~~~~~~~~a~ 132 (471)
T PRK07787 83 ERRHILADSGAQAWLGPAPDDP--AGL--PHVPVRL--------------HAR------------SWHRYPEPDPDAPAL 132 (471)
T ss_pred HHHHHHHhcCCCEEEecCCccc--ccc--cceeeec--------------ccc------------ccccCCCCCCCceEE
Confidence 9999999999999999863110 000 0000000 000 001112346789999
Q ss_pred EEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHHHHH
Q 013850 197 LLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMAL 276 (435)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~ 276 (435)
|+|||||||.||+|.++|+++...+.......... .++++++.+|++|.+|++..++.++..|+++++.+.+++..++
T Consensus 133 i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 210 (471)
T PRK07787 133 IVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWT--ADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYA 210 (471)
T ss_pred EEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCC--ccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHH
Confidence 99999999999999999999998876655544443 3489999999999999988899999999999999889999999
Q ss_pred HHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCC
Q 013850 277 RAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENP 356 (435)
Q Consensus 277 ~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 356 (435)
+.++ +++|.+.++|+++..|.+.... ...++++|.++.||+++++++.++|.+.++ .++++.||+||++........
T Consensus 211 ~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~ 287 (471)
T PRK07787 211 QALS-EGGTLYFGVPTVWSRIAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALTG-HRPVERYGMTETLITLSTRAD 287 (471)
T ss_pred HHHh-hCceEEEcchHHHHHHHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHcC-CCeecccCccccCcceecCCC
Confidence 9999 9999999999999999875432 346789999999999999999999999886 899999999998865444322
Q ss_pred CCCCcCCCCcccccCCcEEEEEeCCCCccCC-CCC-ceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 357 LVGVRRSGSAGTLVAGVEAQIVSVDTLKPLP-PNQ-LGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 357 ~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~-~g~-~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
. ...++++|+|+++++++|+|+ ++.+++ .++ +|||+++|++++.| ||++++.+.+.| ..++||+|||+++
T Consensus 288 ~--~~~~~~vG~~~~g~~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~g--y~~~~~~t~~~~---~~~~~~~TGDlg~ 359 (471)
T PRK07787 288 G--ERRPGWVGLPLAGVETRLVDE-DGGPVPHDGETVGELQVRGPTLFDG--YLNRPDATAAAF---TADGWFRTGDVAV 359 (471)
T ss_pred C--cccCCcccccCCCcEEEEECC-CCCCCCCCCCCceEEEEECcccchh--hcCChhhchhcc---cCCCceecCceEE
Confidence 2 445678999999999999995 677776 344 89999999999999 999999998877 2467999999753
No 101
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-48 Score=389.96 Aligned_cols=382 Identities=21% Similarity=0.292 Sum_probs=289.8
Q ss_pred CchHHHHHhhcccCCCceeeeecC-------CCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013850 27 FSMVHFLFRNSASYSSKLALIDAD-------SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 99 (435)
+++.++|.+++..+|+++|+++.+ ..+.+||.||.++++++|++|+++| .+||+|+++++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 368899999999999999998642 1268999999999999999999999 68999999999999999999999
Q ss_pred HHcCcEEEecCC---CCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCC------cEEeccCCcccccccccccccccc
Q 013850 100 IAIGAIASTANP---VYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP------AVLLGSKDKVSSSGLISRSSKIVS 170 (435)
Q Consensus 100 ~~~G~~~v~i~~---~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 170 (435)
+++|++++|+++ ..+.+++.++++.+++++++++++..+.+...... ..++..+
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 142 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVD----------------- 142 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeec-----------------
Confidence 999999999997 44788999999999999999998876665432110 0000000
Q ss_pred hhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhh-hhc---cCCCcEEEecchHHH
Q 013850 171 FHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ-ELV---GELDHVVLCVLPMFH 246 (435)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~---~~~~d~~l~~~~l~~ 246 (435)
..+... . .........++++++|+|||||||.||+|.++|++++..+....... ... ...++++++.+|++|
T Consensus 143 ~~~~~~--~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h 218 (578)
T PRK05850 143 LLDLDS--P--RGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYH 218 (578)
T ss_pred cccccc--C--CccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCC
Confidence 000000 0 11112334678999999999999999999999999988765543322 111 122489999999999
Q ss_pred HHHHHHHHHhhhhcCcEEEecCCC----CHHHHHHHHHhcCceEEEecHHHHH-HHHhcc---cccCCCCcceeEEEecC
Q 013850 247 VFGLSVILYDQLQKGNCVVSMGKF----DIEMALRAIEKYRVTVWWVVPPIIL-ALAKNS---LVRKFDISSLKLVGSGA 318 (435)
Q Consensus 247 ~~g~~~~~~~~l~~G~~i~~~~~~----~~~~~~~~l~~~~~t~~~~~P~~~~-~l~~~~---~~~~~~l~~lr~i~~gG 318 (435)
.+|+...++.++..|+++++.++. ++..+++.+++++++++ .+|.++. .+.... .....+++++|.+++||
T Consensus 219 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg 297 (578)
T PRK05850 219 DMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGS 297 (578)
T ss_pred CchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECc
Confidence 999977799999999999998643 78999999999999865 5665543 333221 11234678999999999
Q ss_pred CCCcHHHHHHHHhhCC-----CCeeecCcCcccccccccccCCCCCC-----------------------cCCCCccccc
Q 013850 319 APLGKELMEDCQKNIP-----GATIFQGYGMTETCAPISLENPLVGV-----------------------RRSGSAGTLV 370 (435)
Q Consensus 319 ~~l~~~~~~~~~~~~~-----~~~~~~~yG~tE~~~~~~~~~~~~~~-----------------------~~~~~~G~~~ 370 (435)
+++++++.++|.+.|+ +..+++.||+||++..+......... .....+|.|.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~ 377 (578)
T PRK05850 298 ERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR 377 (578)
T ss_pred CCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC
Confidence 9999999999998873 24799999999987654432211000 0011334443
Q ss_pred CCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccc--c------ccCcceecCCCCC
Q 013850 371 AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC--E------HTDSFIRGKDQQT 434 (435)
Q Consensus 371 ~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~--~------~~~~~~~tgD~~~ 434 (435)
+.+++|+|++++.+++.|+.|||+++|++++.| ||++++.|.+.|.- . ..++||+|||++.
T Consensus 378 -~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~g--Y~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~ 446 (578)
T PRK05850 378 -SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAG--YWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGF 446 (578)
T ss_pred -CCEEEEEcCCCCcCCCCCCEEEEEEecCccccc--ccCChhhhHHHhhcccccccccCCCCCeeeccceee
Confidence 578999998788999999999999999999999 99999999987720 0 1257999999874
No 102
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.7e-47 Score=374.56 Aligned_cols=375 Identities=23% Similarity=0.275 Sum_probs=294.5
Q ss_pred HhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCC
Q 013850 34 FRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY 113 (435)
Q Consensus 34 ~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~ 113 (435)
..+++++|+++|+++.+.++.+||.||.++++++|+.|+++|+++|++|+++++|+++++++++||+++|++++|+++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~ 83 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHL 83 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccccc
Confidence 46778899999999865578899999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCeEEEEccccHHHHhhcCC-----CcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCCC
Q 013850 114 TVSELSKQVKDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVS 188 (435)
Q Consensus 114 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (435)
+.+++.++++.++++.++++......+..... ...+..... ........+.+...... ....
T Consensus 84 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-----~~~~ 150 (511)
T PRK13391 84 TPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGD--------GELEGFVGYAEAVAGLP-----ATPI 150 (511)
T ss_pred CHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCC--------CCCcccccHHHHhcCCC-----CCCC
Confidence 99999999999999999999877655433321 111111110 00111222332221111 1111
Q ss_pred CCCCCEEEEEeCCCCCCCccceee--ccHHHHHHHH---HHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcE
Q 013850 189 VKQTDAAALLYSSGTTGVSKGVIL--THKNFIAASL---MISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (435)
Q Consensus 189 ~~~~~~~~i~~TSGtTG~pK~v~~--t~~~l~~~~~---~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~ 263 (435)
.+..+.++++|||||||.||+|.+ +|.++..... .......+ ..++++++..|++|..++. ..+.++..|++
T Consensus 151 ~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~p~~h~~~~~-~~~~~~~~g~~ 227 (511)
T PRK13391 151 ADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGF--RSDMVYLSPAPLYHSAPQR-AVMLVIRLGGT 227 (511)
T ss_pred CCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCC--CCCCeEEEcCCHHHHHHHH-HHHHHHHcCce
Confidence 234567899999999999999995 4655543221 11122222 2348999999999999885 66788999999
Q ss_pred EEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccc--cCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecC
Q 013850 264 VVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 341 (435)
Q Consensus 264 i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~ 341 (435)
+++.+.+++..+++.++++++|++.++|+++..+.+.... ...+++++|.+++||+++++++.+++++.++ ..+++.
T Consensus 228 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g-~~v~~~ 306 (511)
T PRK13391 228 VIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWG-PIIHEY 306 (511)
T ss_pred EEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcC-Cceeee
Confidence 9999889999999999999999999999999988865322 2345789999999999999999999999886 899999
Q ss_pred cCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccccc
Q 013850 342 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 421 (435)
Q Consensus 342 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~ 421 (435)
||+||++.+....... .....+++|+|+++ .++|+| +++++++.|+.|||+++|+ ++.| ||++++.+.+.+.
T Consensus 307 YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~g--y~~~~~~~~~~~~-- 378 (511)
T PRK13391 307 YAATEGLGFTACDSEE-WLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFE--YLNDPAKTAEARH-- 378 (511)
T ss_pred eccccccceEEecCcc-ccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceE--EcCChhHhHHhhc--
Confidence 9999998765543222 13456799999999 689999 6899999999999999999 8889 9999999887651
Q ss_pred ccCcceecCCCC
Q 013850 422 HTDSFIRGKDQQ 433 (435)
Q Consensus 422 ~~~~~~~tgD~~ 433 (435)
..++|++|||++
T Consensus 379 ~~~~w~~TGD~g 390 (511)
T PRK13391 379 PDGTWSTVGDIG 390 (511)
T ss_pred cCCCEEecCCEE
Confidence 125899999975
No 103
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.9e-47 Score=375.65 Aligned_cols=389 Identities=20% Similarity=0.242 Sum_probs=302.7
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
+|+.++|.++++++|+++|+++. ++.+||.||.+.++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~ 80 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG--DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVP 80 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEE
Confidence 68999999999999999999986 5899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCC-----cEEeccCCcccccccccccccccchhhhhhhcCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP-----AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (435)
+|+++.++.+++.++++.+++++++++......+...... .++...+.... ....+..++++++....
T Consensus 81 v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-- 153 (533)
T PRK07798 81 VNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGN-----DLLPGAVDYEDALAAGS-- 153 (533)
T ss_pred EecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCccc-----ccCCccccHHHHHhccC--
Confidence 9999999999999999999999999998776666554211 12222111100 11112345666654433
Q ss_pred CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhh------hhc-------cCCCcEEEecchHHHHH
Q 013850 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ------ELV-------GELDHVVLCVLPMFHVF 248 (435)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~------~~~-------~~~~d~~l~~~~l~~~~ 248 (435)
........ ..+.++|+|||||||.||+|+++|+++........... ... ...+++++..+|++|..
T Consensus 154 ~~~~~~~~-~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 232 (533)
T PRK07798 154 PERDFGER-SPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGA 232 (533)
T ss_pred CcCCCCCC-CCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhh
Confidence 11111122 23456899999999999999999999876543322111 000 02338899999999999
Q ss_pred HHHHHHHhhhhcCcEEEecC--CCCHHHHHHHHHhcCceEEEecHHHHH-HHHhccc-ccCCCCcceeEEEecCCCCcHH
Q 013850 249 GLSVILYDQLQKGNCVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIIL-ALAKNSL-VRKFDISSLKLVGSGAAPLGKE 324 (435)
Q Consensus 249 g~~~~~~~~l~~G~~i~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~-~l~~~~~-~~~~~l~~lr~i~~gG~~l~~~ 324 (435)
+++ .++.++..|+++++.+ .+++..+++.++++++|.+.++|..+. .+.+... .....++++|.+++||++++++
T Consensus 233 ~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~ 311 (533)
T PRK07798 233 GQW-AAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPS 311 (533)
T ss_pred hHH-HHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHH
Confidence 996 8889999999999998 789999999999999999999987553 3333322 3345678999999999999999
Q ss_pred HHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcc--cccCCcEEEEEeCCCCccCCCCCc--eeEEEeCCC
Q 013850 325 LMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAG--TLVAGVEAQIVSVDTLKPLPPNQL--GEIWVRGPN 400 (435)
Q Consensus 325 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~i~d~~~~~~~~~g~~--Gei~v~g~~ 400 (435)
+.++|++.+++..+++.||+||++......... .....| .+.++..++|+| +++++++.|+. |+++ +++.
T Consensus 312 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----~~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~-~~~~ 385 (533)
T PRK07798 312 VKEALLELLPNVVLTDSIGSSETGFGGSGTVAK----GAVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIA-RRGH 385 (533)
T ss_pred HHHHHHHHcCCCeEEeeecccccccccccCCCC----CCccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEE-eecC
Confidence 999999999779999999999986544433211 112333 788999999999 57779999887 6665 5678
Q ss_pred ccccccccCCcccccccccccccCcceecCCCCC
Q 013850 401 VTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 401 ~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
++.| ||++++.+.+.|...+.++|++|||+++
T Consensus 386 ~~~g--y~~~~~~t~~~f~~~~~~~~~~TGD~~~ 417 (533)
T PRK07798 386 IPLG--YYKDPEKTAETFPTIDGVRYAIPGDRAR 417 (533)
T ss_pred cccc--ccCChhhhHHhhccCCCCceEEcCcEEE
Confidence 9999 9999999988874344457999999763
No 104
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=3.8e-47 Score=365.60 Aligned_cols=352 Identities=23% Similarity=0.328 Sum_probs=288.2
Q ss_pred eHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc
Q 013850 56 SFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 56 Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (435)
||.||.+.++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++.+++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeecc
Q 013850 135 ELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTH 214 (435)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~ 214 (435)
.....+............. +......... .........++++++++|||||||.||+|.++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~ 142 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPL-----------------ELAALDDAPA-PPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTH 142 (408)
T ss_pred chhhhccccCCceEEechh-----------------hhhhcccccc-cccccCCCCCCCcEEEEEcCCCCCCCCEEEecc
Confidence 8776655443222222111 0000000000 111111245789999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCC---HHHHHHHHHhcCceEEEecH
Q 013850 215 KNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD---IEMALRAIEKYRVTVWWVVP 291 (435)
Q Consensus 215 ~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~---~~~~~~~l~~~~~t~~~~~P 291 (435)
+++............+. ..+++++..|++|.+++. .++.++..|+++++.+... +..+.+.++++++|.+.++|
T Consensus 143 ~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p 219 (408)
T TIGR01733 143 RSLVNLLAWLARRYGLD--PDDRVLQFASLSFDASVE-EIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTP 219 (408)
T ss_pred HHHHHHHHHHHHhcCCC--CCceEEEecCCccchhHH-HHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCH
Confidence 99998877766644443 349999999999999985 8899999999999987543 68899999999999999999
Q ss_pred HHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCC-CCc--CCCCccc
Q 013850 292 PIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLV-GVR--RSGSAGT 368 (435)
Q Consensus 292 ~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~-~~~--~~~~~G~ 368 (435)
.+++.|.+... ..+++||.+++||+++++++.+.+++.++++.+++.||+||++.++....... ... +..++|.
T Consensus 220 ~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~ 296 (408)
T TIGR01733 220 SLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGR 296 (408)
T ss_pred HHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCc
Confidence 99999998754 56889999999999999999999999998799999999999987775322111 111 2778999
Q ss_pred ccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccc--c-ccccCc--ceecCCCCC
Q 013850 369 LVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW--G-CEHTDS--FIRGKDQQT 434 (435)
Q Consensus 369 ~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~--~-~~~~~~--~~~tgD~~~ 434 (435)
|+++++++|+|+ ++++++.|+.|||+++|++++.| |+++++.+.+.| . +...++ ||+|||++.
T Consensus 297 ~~~~~~~~i~~~-~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~ 364 (408)
T TIGR01733 297 PLANTRLYVLDD-DLRPVPVGVVGELYIGGPGVARG--YLNRPELTAERFVPDPFAGGDGARLYRTGDLVR 364 (408)
T ss_pred ccCCceEEEECC-CCCCCCCCCceEEEecCcccccc--ccCChhhhhcceeeCCCCCCCCceEEECCceEE
Confidence 999999999996 59999999999999999999999 999999998877 2 122233 999999864
No 105
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-46 Score=373.65 Aligned_cols=389 Identities=21% Similarity=0.289 Sum_probs=298.2
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
+++.+.|.+.++.+|+++|+... +..+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~ 95 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHG--DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVL 95 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEE
Confidence 67899999999999999999886 4789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC----CC-cEEeccCCcccccccccccccccchhhhhhhcCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LP-AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (435)
+|+++.++.+++..+++.++++.++++++..+.+.... .. .+++...... .. ........++.++.....
T Consensus 96 vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-- 170 (545)
T PRK08162 96 NTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPE--YP-GGRFIGALDYEAFLASGD-- 170 (545)
T ss_pred eccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccc--cc-cCCCcccccHHHHhccCC--
Confidence 99999999999999999999999999998776654421 11 2222211100 00 001112334555543322
Q ss_pred CCCC-CCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhc
Q 013850 182 TDIP-DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (435)
Q Consensus 182 ~~~~-~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~ 260 (435)
.... ....+..++++|+|||||||.||+|.++|+++............+ ..++++++.+|++|..++...++..+ .
T Consensus 171 ~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~--~~~~~~l~~~pl~h~~~~~~~~~~~~-~ 247 (545)
T PRK08162 171 PDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGM--PKHPVYLWTLPMFHCNGWCFPWTVAA-R 247 (545)
T ss_pred ccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCC--CCCCeeEeccCcHhhhhHHHHHHHHH-H
Confidence 1111 122345688999999999999999999999887665444333333 23389999999999999864444445 4
Q ss_pred CcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeec
Q 013850 261 GNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (435)
Q Consensus 261 G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~ 340 (435)
|++.++...+++..+++.++++++|++.++|+++..|++........+.+++.++++|+++++++.+.+++. ++++++
T Consensus 248 ~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~ 325 (545)
T PRK08162 248 AGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTH 325 (545)
T ss_pred ccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceee
Confidence 555555567899999999999999999999999999998765444455667777899999999999998775 599999
Q ss_pred CcCcccccccccccCCCCC---------CcCCCCcccccC-CcEEEEEeCCCCccCCC-C-CceeEEEeCCCcccccccc
Q 013850 341 GYGMTETCAPISLENPLVG---------VRRSGSAGTLVA-GVEAQIVSVDTLKPLPP-N-QLGEIWVRGPNVTPGIVYI 408 (435)
Q Consensus 341 ~yG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~-~~~~~i~d~~~~~~~~~-g-~~Gei~v~g~~~~~g~~y~ 408 (435)
.||+||+++.+........ .....+.|.+.+ +..++|+|++++++++. | +.|||+++|+.++.| ||
T Consensus 326 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~g--Y~ 403 (545)
T PRK08162 326 VYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKG--YL 403 (545)
T ss_pred cccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhh--hc
Confidence 9999998755544321110 112345666654 34678889778888876 3 469999999999999 99
Q ss_pred CCcccccccccccccCcceecCCCC
Q 013850 409 NFFVFTLFLWGCEHTDSFIRGKDQQ 433 (435)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~tgD~~ 433 (435)
++++.+...| .++||+|||++
T Consensus 404 ~~~~~~~~~~----~~g~~~TGDl~ 424 (545)
T PRK08162 404 KNPKATEEAF----AGGWFHTGDLA 424 (545)
T ss_pred CChhhhHHHh----hCCCcccCceE
Confidence 9999999887 46799999976
No 106
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-47 Score=381.52 Aligned_cols=387 Identities=21% Similarity=0.257 Sum_probs=297.1
Q ss_pred CCCCCCCCCchHHHHHhhcccCCCceeeeecCC-CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHH
Q 013850 19 LVLPSDPSFSMVHFLFRNSASYSSKLALIDADS-DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL 97 (435)
Q Consensus 19 ~~~~~~~~~tl~~~l~~~~~~~p~~~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~l 97 (435)
.++|.. .|+.++|...++.+|+..++..... .+.+||.||.+++.++|++|++.|+++||+|+++++|+++++++++
T Consensus 15 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~l 92 (579)
T PRK09192 15 RRYADF--PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFF 92 (579)
T ss_pred ccccch--hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHH
Confidence 456666 7999999999998887665532211 2679999999999999999999999999999999999999999999
Q ss_pred HHHHcCcEEEecCCCCC-------HHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccc
Q 013850 98 GVIAIGAIASTANPVYT-------VSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVS 170 (435)
Q Consensus 98 A~~~~G~~~v~i~~~~~-------~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (435)
||+++|++++|+++..+ .+++..+++.++++++|+++...+.+......... ....+
T Consensus 93 A~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~----------------~~~~~ 156 (579)
T PRK09192 93 ACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPL----------------LHVLS 156 (579)
T ss_pred HHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccc----------------cceee
Confidence 99999999999987543 58899999999999999998776655543211000 00112
Q ss_pred hhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHh-hhhhccCCCcEEEecchHHHHHH
Q 013850 171 FHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPMFHVFG 249 (435)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~d~~l~~~~l~~~~g 249 (435)
+.++..... .........++++++|+|||||||.||+|.++|+++......... ...+ ..+|+++..+|++|.++
T Consensus 157 ~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~h~~g 232 (579)
T PRK09192 157 HAWFKALPE--ADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKV--RPGDRCVSWLPFYHDMG 232 (579)
T ss_pred hhhhcccCC--CccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccC--CCCCeEEEeCCCCCcch
Confidence 222222111 112223456789999999999999999999999999987665543 3333 33499999999999999
Q ss_pred HHHHHHhhhhcCcEEEecCC----CCHHHHHHHHHhcCceEEEecHHHHHHHHhcc---cccCCCCcceeEEEecCCCCc
Q 013850 250 LSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNS---LVRKFDISSLKLVGSGAAPLG 322 (435)
Q Consensus 250 ~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~---~~~~~~l~~lr~i~~gG~~l~ 322 (435)
+...++.++..|+++++.+. .++..+++.+.++++++++..|..+..+.... .....+++++|.+++||++++
T Consensus 233 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~ 312 (579)
T PRK09192 233 LVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIR 312 (579)
T ss_pred hHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCC
Confidence 98678888999999977652 26889999999999998777655555544322 123356889999999999999
Q ss_pred HHHHHHHHhhCCC-----CeeecCcCcccccccccccCCCCC--------------------------CcCCCCcccccC
Q 013850 323 KELMEDCQKNIPG-----ATIFQGYGMTETCAPISLENPLVG--------------------------VRRSGSAGTLVA 371 (435)
Q Consensus 323 ~~~~~~~~~~~~~-----~~~~~~yG~tE~~~~~~~~~~~~~--------------------------~~~~~~~G~~~~ 371 (435)
+++.+++.+.++. ..+++.||+||++..++....... .....++|+++|
T Consensus 313 ~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p 392 (579)
T PRK09192 313 PDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALP 392 (579)
T ss_pred HHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCC
Confidence 9999999988741 358999999998866554322110 011357899999
Q ss_pred CcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 372 GVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 372 ~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+++++|+| +++..++.|+.|||+++|+.++.| ||++ +.+.+.+ ..++||+|||++.
T Consensus 393 ~~~v~i~d-~~~~~~~~g~~Gel~i~g~~~~~g--Y~~~-~~~~~~~---~~dgw~~TGDlg~ 448 (579)
T PRK09192 393 GHEIEIRN-EAGMPLPERVVGHICVRGPSLMSG--YFRD-EESQDVL---AADGWLDTGDLGY 448 (579)
T ss_pred CcEEEEEC-CCCCCCCCCCEEEEEecCCchhhh--hcCC-ccccccc---cCCceeeccceee
Confidence 99999999 578899999999999999999999 9999 5555544 3578999999863
No 107
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.2e-46 Score=404.99 Aligned_cols=381 Identities=22% Similarity=0.339 Sum_probs=296.4
Q ss_pred CchHHHHHhhcccCC-CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 27 FSMVHFLFRNSASYS-SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p-~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
.++.+.|.++++++| ++.|+.+. +++.+||+||.++++++|+.|++ |+++||+|+++++|+++++++++||+++|++
T Consensus 631 ~~~~~~l~~~~~~~~~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 708 (1140)
T PRK06814 631 RTLFEALIEAAKIHGFKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRV 708 (1140)
T ss_pred CCHHHHHHHHHHHcCCCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCE
Confidence 678888888888887 45666653 25789999999999999999976 9999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHh------hcCCCcEEeccCCcccccccccccccccchhhhhhhcC
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK------DLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 179 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (435)
++|+++..+.+++.++++++++++++++++..+... .......++..+... ........+.+......
T Consensus 709 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~ 782 (1140)
T PRK06814 709 PAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVR------AQIGLADKIKGLLAGRF 782 (1140)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhh------ccCChHHHHHHHhhccC
Confidence 999999999999999999999999999976544321 111111111111000 00000001111111111
Q ss_pred CCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhh
Q 013850 180 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (435)
Q Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~ 259 (435)
+........++|+++|+|||||||.||+|.++|+++.+..........+. .+|++++.+|++|.+++...++.++.
T Consensus 783 --~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~--~~d~~l~~~pl~h~~g~~~~~~~~l~ 858 (1140)
T PRK06814 783 --PLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFS--PEDKVFNALPVFHSFGLTGGLVLPLL 858 (1140)
T ss_pred --CccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCC--CcCEEEEecchHHHHHHHHHHHHHHH
Confidence 11111245789999999999999999999999999988776655544443 34999999999999999768889999
Q ss_pred cCcEEEecCC-CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCee
Q 013850 260 KGNCVVSMGK-FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATI 338 (435)
Q Consensus 260 ~G~~i~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~ 338 (435)
.|+++++.+. .+...+.+.++++++|++.++|+++..+.+.. ...+++++|.+++||+++++++.+.+.+.++ .++
T Consensus 859 ~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~-~~~ 935 (1140)
T PRK06814 859 SGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKFG-IRI 935 (1140)
T ss_pred cCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHhC-CcE
Confidence 9999998763 56788899999999999999999999988753 3456889999999999999999999999996 999
Q ss_pred ecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccc
Q 013850 339 FQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW 418 (435)
Q Consensus 339 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~ 418 (435)
++.||+||++..+....+. ..+.+++|+|++++++++.+. .+ .++.|||+++|++++.| ||++++.....
T Consensus 936 ~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~g~~~~~~~~-~~----~~~~Gel~v~g~~~~~g--Y~~~~~~~~~~- 1005 (1140)
T PRK06814 936 LEGYGVTETAPVIALNTPM--HNKAGTVGRLLPGIEYRLEPV-PG----IDEGGRLFVRGPNVMLG--YLRAENPGVLE- 1005 (1140)
T ss_pred EeccccccccceEEecCCC--CCCCCcCCccCCCCeEEEeec-CC----CCCceEEEEeCCCcchh--hcCCCCCCccc-
Confidence 9999999998776654433 346789999999999999874 32 36789999999999999 99876543211
Q ss_pred cccccCcceecCCCCC
Q 013850 419 GCEHTDSFIRGKDQQT 434 (435)
Q Consensus 419 ~~~~~~~~~~tgD~~~ 434 (435)
...+|||+|||+++
T Consensus 1006 --~~~~g~~~TGDl~~ 1019 (1140)
T PRK06814 1006 --PPADGWYDTGDIVT 1019 (1140)
T ss_pred --cCCCCeEecCCEEE
Confidence 12467999999764
No 108
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-46 Score=373.86 Aligned_cols=377 Identities=23% Similarity=0.304 Sum_probs=296.2
Q ss_pred chHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEE
Q 013850 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (435)
Q Consensus 28 tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 107 (435)
++.+.|.+.++.+|+.+++.+.+.++.+||.||.++++++|++|.+.|+++||+|+|+++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 57888899999999999998887678899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHH-------HHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCC
Q 013850 108 TANPVYTVSEL-------SKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (435)
Q Consensus 108 ~i~~~~~~~~~-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (435)
|+++..+.+++ ..+++.++++.+++++.....+...... ......++++.....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~~~~- 143 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK------------------GIRVLTVADLLAADP- 143 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc------------------CCceeehhhhcccCC-
Confidence 99988775443 4567788999999987665444322110 111233444433211
Q ss_pred CCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhc
Q 013850 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (435)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~ 260 (435)
.......++++++|+|||||||.||+|.++|+++............+. ...|++++.+|++|.+++...++.++..
T Consensus 144 ---~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~-~~~d~~~~~~p~~~~~g~~~~~~~~l~~ 219 (545)
T PRK07768 144 ---IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFD-VETDVMVSWLPLFHDMGMVGFLTVPMYF 219 (545)
T ss_pred ---CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCC-CCCceeEEeCCCccchHHHHHHHHHHHC
Confidence 122345679999999999999999999999999988766555444332 2228999999999999997667788999
Q ss_pred CcEEEecCC----CCHHHHHHHHHhcCceEEEecHHHHHHHHhcc----cccCCCCcceeEEEecCCCCcHHHHHHHHhh
Q 013850 261 GNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNS----LVRKFDISSLKLVGSGAAPLGKELMEDCQKN 332 (435)
Q Consensus 261 G~~i~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~----~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~ 332 (435)
|+++++... .++..+++.+++++++++.++|.++..|.+.. .....+++++|.++.+|+++++++.+.+.+.
T Consensus 220 g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~ 299 (545)
T PRK07768 220 GAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDA 299 (545)
T ss_pred CceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHH
Confidence 999988754 26788999999999999988887776665432 1123578899999999999999999998874
Q ss_pred ---CC--CCeeecCcCcccccccccccCCCCC------------------------CcCCCCcccccCCcEEEEEeCCCC
Q 013850 333 ---IP--GATIFQGYGMTETCAPISLENPLVG------------------------VRRSGSAGTLVAGVEAQIVSVDTL 383 (435)
Q Consensus 333 ---~~--~~~~~~~yG~tE~~~~~~~~~~~~~------------------------~~~~~~~G~~~~~~~~~i~d~~~~ 383 (435)
++ ...+++.||+||++..+........ ..+.+++|+|+++++++|+| +++
T Consensus 300 ~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~ 378 (545)
T PRK07768 300 GARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDG 378 (545)
T ss_pred HHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCC
Confidence 43 2359999999999876543322100 12346899999999999999 688
Q ss_pred ccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 384 KPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 384 ~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+++++|+.|||+++|+.++.| ||+++...... ..++||+|||+++
T Consensus 379 ~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~----~~~g~~~TGDl~~ 423 (545)
T PRK07768 379 QVLPPRGVGVIELRGESVTPG--YLTMDGFIPAQ----DADGWLDTGDLGY 423 (545)
T ss_pred CCCCCCCEEEEEEccCccccc--ccCCCCCcccc----cCCCeeeccceEE
Confidence 999999999999999999999 99865544332 2467999999763
No 109
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4e-46 Score=368.44 Aligned_cols=372 Identities=22% Similarity=0.290 Sum_probs=288.6
Q ss_pred eeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHH
Q 013850 44 LALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVK 123 (435)
Q Consensus 44 ~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~ 123 (435)
.|++.. ++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++
T Consensus 3 ~~~~~~--~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~ 80 (509)
T PRK12406 3 ATIISG--DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILE 80 (509)
T ss_pred eEEEEC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHh
Confidence 355655 489999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEEccccHHHHhhcCCC-cEEeccCCc--cccc-----ccccccccccchhhhhhhcCCCCCCCCCCCCCCCEE
Q 013850 124 DSNPKLVITVPELWDKVKDLNLP-AVLLGSKDK--VSSS-----GLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAA 195 (435)
Q Consensus 124 ~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (435)
.+++++++++......+...... ..++..... .... ...........+++...... ......+++++
T Consensus 81 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a 155 (509)
T PRK12406 81 DSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE-----PYDGPPVPQPQ 155 (509)
T ss_pred ccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccC-----ccCCCCCCCce
Confidence 99999999998776655433211 111111000 0000 00011122334444432211 12234578999
Q ss_pred EEEeCCCCCCCccceeeccHHHHHHHH---HHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCH
Q 013850 196 ALLYSSGTTGVSKGVILTHKNFIAASL---MISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDI 272 (435)
Q Consensus 196 ~i~~TSGtTG~pK~v~~t~~~l~~~~~---~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~ 272 (435)
+++|||||||.||+|.++|........ .......+ ..++++++..|++|..+.. ..+.++..|+++++.+.+++
T Consensus 156 ~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~~~~~~~~ 232 (509)
T PRK12406 156 SMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGL--KPGIRALLTGPLYHSAPNA-YGLRAGRLGGVLVLQPRFDP 232 (509)
T ss_pred EEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCC--CCCceEEEEeCCcccchHH-HHHHHHhhheEEEEccCCCH
Confidence 999999999999999987765433222 11122222 3338999999999998875 44556888999999888899
Q ss_pred HHHHHHHHhcCceEEEecHHHHHHHHhccc--ccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCccccccc
Q 013850 273 EMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAP 350 (435)
Q Consensus 273 ~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 350 (435)
..+++.++++++|++.++|+++..|++... ....+++++|.++.||+++++++.+++.+.++ +.+++.||+||++.+
T Consensus 233 ~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~ 311 (509)
T PRK12406 233 EELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWG-PVIYEYYGSTESGAV 311 (509)
T ss_pred HHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcC-CcEEeeccccccCce
Confidence 999999999999999999999999987543 23456789999999999999999999999886 899999999999876
Q ss_pred ccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccc-cccccCCcccccccccccccCcceec
Q 013850 351 ISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTP-GIVYINFFVFTLFLWGCEHTDSFIRG 429 (435)
Q Consensus 351 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~-g~~y~~~~~~~~~~~~~~~~~~~~~t 429 (435)
..... .+...+++++|.|+++++++|+| +++++++.|+.|||+++|+.++. | |+++++.+...+ .++||+|
T Consensus 312 ~~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~--y~~~~~~~~~~~----~~~~~~T 383 (509)
T PRK12406 312 TFATS-EDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFT--YHNKPEKRAEID----RGGFITS 383 (509)
T ss_pred EecCc-ccccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCcccccc--ccCCchhccccc----CCCCeEE
Confidence 55432 22234668899999999999999 57899999999999999998875 8 999999887655 4679999
Q ss_pred CCCCC
Q 013850 430 KDQQT 434 (435)
Q Consensus 430 gD~~~ 434 (435)
||++.
T Consensus 384 GD~~~ 388 (509)
T PRK12406 384 GDVGY 388 (509)
T ss_pred ccEEE
Confidence 99753
No 110
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.7e-46 Score=367.45 Aligned_cols=365 Identities=26% Similarity=0.324 Sum_probs=290.2
Q ss_pred eeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHh
Q 013850 45 ALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKD 124 (435)
Q Consensus 45 a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~ 124 (435)
|++....++.+||.||.+.++++|+.|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++.
T Consensus 2 ~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~ 81 (502)
T PRK08276 2 AVIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDD 81 (502)
T ss_pred ceEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhc
Confidence 44444447899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEccccHHHHhhcC------CCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEE
Q 013850 125 SNPKLVITVPELWDKVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALL 198 (435)
Q Consensus 125 ~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 198 (435)
++++++++++...+.+.... .+.+.+... .......+++...... .......++.++++
T Consensus 82 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~i~ 146 (502)
T PRK08276 82 SGAKVLIVSAALADTAAELAAELPAGVPLLLVVAG----------PVPGFRSYEEALAAQP-----DTPIADETAGADML 146 (502)
T ss_pred CCCCEEEEccchhhHHHHHhhhccccccEEEEeCC----------CCCccccHHHHHhcCC-----CCCCCCCCcceEEE
Confidence 99999999987766654331 122222211 1112223444332211 11223556789999
Q ss_pred eCCCCCCCccceeeccHHHHHHHH--HHHh--hhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHHH
Q 013850 199 YSSGTTGVSKGVILTHKNFIAASL--MISA--HQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEM 274 (435)
Q Consensus 199 ~TSGtTG~pK~v~~t~~~l~~~~~--~~~~--~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~ 274 (435)
|||||||.||+|.++|.++..... .... ........++++++..|++|.+++. ..+.++..|+++++.+.+++..
T Consensus 147 ~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~ 225 (502)
T PRK08276 147 YSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLR-FGMSALALGGTVVVMEKFDAEE 225 (502)
T ss_pred ECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHH-HHHHHHhccceEEEcCCCCHHH
Confidence 999999999999999877654321 1111 1111112348999999999999985 5567899999999998899999
Q ss_pred HHHHHHhcCceEEEecHHHHHHHHhcccc--cCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCccccccccc
Q 013850 275 ALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPIS 352 (435)
Q Consensus 275 ~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~ 352 (435)
+++.++++++|++.++|+++..+++.... ...+++++|.+++||++++.++.+++.+.++ ..+++.||+||++.+..
T Consensus 226 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~-~~~~~~yG~tE~~~~~~ 304 (502)
T PRK08276 226 ALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG-PIIHEYYASSEGGGVTV 304 (502)
T ss_pred HHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhC-cHhhhhcccccccceeE
Confidence 99999999999999999999999886532 3456889999999999999999999999986 88999999999987555
Q ss_pred ccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCC
Q 013850 353 LENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQ 432 (435)
Q Consensus 353 ~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~ 432 (435)
..... .....+++|+|+ ++.++|+| +++.+++.|+.|||+++|+.++.| ||++++.+...+ ..++||+|||+
T Consensus 305 ~~~~~-~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~---~~~~~~~TGD~ 376 (502)
T PRK08276 305 ITSED-WLAHPGSVGKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFE--YHNDPEKTAAAR---NPHGWVTVGDV 376 (502)
T ss_pred ecCcc-ccccCCCcceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccch--hcCCHHHHHHHh---cCCCceeecce
Confidence 43322 234567899999 88999999 578999999999999999999999 999999988866 24589999998
Q ss_pred CC
Q 013850 433 QT 434 (435)
Q Consensus 433 ~~ 434 (435)
++
T Consensus 377 ~~ 378 (502)
T PRK08276 377 GY 378 (502)
T ss_pred EE
Confidence 63
No 111
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=4.3e-46 Score=339.96 Aligned_cols=393 Identities=20% Similarity=0.217 Sum_probs=313.2
Q ss_pred CCCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHc
Q 013850 23 SDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (435)
Q Consensus 23 ~~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~ 102 (435)
..++.|+.++|.++++++|+|+|+++.+..+++||+|+.+.++++|+.|...|++.||.|+|.++|.+|++..+|+++++
T Consensus 73 rr~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKl 152 (649)
T KOG1179|consen 73 RRERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKL 152 (649)
T ss_pred hccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhh
Confidence 34458999999999999999999999977789999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCC----cEEeccCCcccccccccccccccchhhhhhhc
Q 013850 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP----AVLLGSKDKVSSSGLISRSSKIVSFHDLIELS 178 (435)
Q Consensus 103 G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (435)
|++..-||++.-.+.+.|.++.++++.+|++++..+.+.+.... .+-+...+. -....+..++...++..
T Consensus 153 Gv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~------~~~~~g~~~L~~~l~~~ 226 (649)
T KOG1179|consen 153 GVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGP------TSVPDGIESLLAKLSAA 226 (649)
T ss_pred CceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCC------CCCCchHHHHHHhhccc
Confidence 99999999999999999999999999999999988877766321 111111110 02222333444444433
Q ss_pred CCCC--CCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHh
Q 013850 179 GSVT--DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYD 256 (435)
Q Consensus 179 ~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~ 256 (435)
...+ .......+-.++++.+|||||||.||+.+++|...............+... |+++.++|++|.+|.+..+..
T Consensus 227 ~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~--DvvY~~lPLYHsaa~ilGi~~ 304 (649)
T KOG1179|consen 227 PKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTAD--DVVYTTLPLYHSAAGILGIGG 304 (649)
T ss_pred ccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCcc--ceEEEcchhHHHHHHHHHHHH
Confidence 3211 122345566789999999999999999999999988876655555666444 999999999999999999999
Q ss_pred hhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCC
Q 013850 257 QLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (435)
Q Consensus 257 ~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 336 (435)
++..|+|+++-..|+...+|+...+|+||++.-.-.+.+.|++++..+...-+.+|..+-.| +.+++++.|.++|+..
T Consensus 305 ~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNG--LR~diW~~Fv~RFg~~ 382 (649)
T KOG1179|consen 305 CLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNG--LRPDIWQQFVKRFGII 382 (649)
T ss_pred HHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCC--CCchHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999988888889999987666 8899999999999978
Q ss_pred eeecCcCcccccccccccCCCCCCcCCCCccc------ccCCcEEEEEeCCCCc----------cCCCCCceeEEEeC--
Q 013850 337 TIFQGYGMTETCAPISLENPLVGVRRSGSAGT------LVAGVEAQIVSVDTLK----------PLPPNQLGEIWVRG-- 398 (435)
Q Consensus 337 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~------~~~~~~~~i~d~~~~~----------~~~~g~~Gei~v~g-- 398 (435)
++.+.||+||...- ..+. +.+.+.+|+ -+-.+++-=+|+++++ +|++||+|.++-+-
T Consensus 383 ~IgE~YgaTEgn~~-~~N~----d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~ 457 (649)
T KOG1179|consen 383 KIGEFYGATEGNSN-LVNY----DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQ 457 (649)
T ss_pred eEEEEeccccCcce-eeee----cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEecc
Confidence 89999999995543 3333 334444443 2223344335666774 48899999765332
Q ss_pred --C-CccccccccCCcccccccc--ccccc-CcceecCCC
Q 013850 399 --P-NVTPGIVYINFFVFTLFLW--GCEHT-DSFIRGKDQ 432 (435)
Q Consensus 399 --~-~~~~g~~y~~~~~~~~~~~--~~~~~-~~~~~tgD~ 432 (435)
| .-+.| |.++.+.|+++. .-|.. |-||.|||+
T Consensus 458 k~P~~~F~G--Y~g~~~~t~kKl~rDVFkkGD~~f~tGDl 495 (649)
T KOG1179|consen 458 KNPLRSFLG--YAGPKKATEKKLLRDVFKKGDVYFNTGDL 495 (649)
T ss_pred CCchhhhcc--ccCchhhhhhhhHHhhhccCcEEEeeCcE
Confidence 2 23889 999888887766 33444 448888885
No 112
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9e-46 Score=387.70 Aligned_cols=387 Identities=14% Similarity=0.168 Sum_probs=285.1
Q ss_pred CCCCchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcC
Q 013850 24 DPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (435)
Q Consensus 24 ~~~~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 103 (435)
.++.|+.++|.++++++|+++|+++. ++.+||+||.++++++|+.|+++|+++||+|+|+++|+++++++++||+++|
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aG 521 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFD--GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLG 521 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 34489999999999999999999986 4799999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCC
Q 013850 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (435)
Q Consensus 104 ~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (435)
++++|++|. +++.++++.++++++|++++..+.+.......+++ ......... .........+++..........
T Consensus 522 av~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 596 (994)
T PRK07868 522 AVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVL-GGGESRDLD-LPDDADVIDMEKIDPDAVELPG 596 (994)
T ss_pred CEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEe-cCCcccccc-CCcchhhhhhhhcCcccccCCc
Confidence 999999985 57899999999999999987776665443333322 211000000 0000011111111110000000
Q ss_pred -CCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCc
Q 013850 184 -IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (435)
Q Consensus 184 -~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~ 262 (435)
.......++++++|+|| ||||.||++.++|.++............+ ..+|++++.+|++|.+++...++.++..|+
T Consensus 597 ~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l--~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~ 673 (994)
T PRK07868 597 WYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAAL--DRRDTVYCLTPLHHESGLLVSLGGAVVGGS 673 (994)
T ss_pred ccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCC--CCCCeEEEecChHHHhHHHHHHHHHhccce
Confidence 01112236899999998 57777787777887765543332222333 334999999999999999766677788888
Q ss_pred EEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCc
Q 013850 263 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGY 342 (435)
Q Consensus 263 ~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~y 342 (435)
++++.+.+++..+++.|+++++|++.++|+++..|++.......++++||.++. +.+++++.+++.+.++++++++.|
T Consensus 674 ~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~g--~gl~~~l~~~~~~~~~~~~l~~~Y 751 (994)
T PRK07868 674 RIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFIG--SGMPTGLWERVVEAFAPAHVVEFF 751 (994)
T ss_pred EEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEec--CCCCHHHHHHHHHHhCchheeeee
Confidence 888888899999999999999999999999999999875555556789998763 349999999999999878999999
Q ss_pred CcccccccccccCCCCCCcCCCCcccccCCc-EEEEE--eC--------CCC--ccCCCCCceeEEEeCCCccccccccC
Q 013850 343 GMTETCAPISLENPLVGVRRSGSAGTLVAGV-EAQIV--SV--------DTL--KPLPPNQLGEIWVRGPNVTPGIVYIN 409 (435)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~--d~--------~~~--~~~~~g~~Gei~v~g~~~~~g~~y~~ 409 (435)
|+||++..... .. ..+.+++|+|++|+ +++|. |+ ++| +.++.|+.|||+++++. |+
T Consensus 752 G~TE~~~~~~~--~~--~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~------~~- 820 (994)
T PRK07868 752 ATTDGQAVLAN--VS--GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARG------PI- 820 (994)
T ss_pred ecccccccccc--cC--CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCC------CC-
Confidence 99997754332 11 34668999999997 66664 21 345 56788999999999973 44
Q ss_pred Cccccccccccc-ccCcceecCCCCC
Q 013850 410 FFVFTLFLWGCE-HTDSFIRGKDQQT 434 (435)
Q Consensus 410 ~~~~~~~~~~~~-~~~~~~~tgD~~~ 434 (435)
+|+.+... +.| +.++||+|||+++
T Consensus 821 ~p~~t~~~-~~~~~~dgw~~TGDlg~ 845 (994)
T PRK07868 821 DPTASVKR-GVFAPADTWISTEYLFR 845 (994)
T ss_pred ChhhhhHh-cccccCCEEEeccceEE
Confidence 34433222 222 2478999999874
No 113
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=6.4e-45 Score=355.01 Aligned_cols=338 Identities=22% Similarity=0.307 Sum_probs=274.6
Q ss_pred chHHHH-HhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 28 SMVHFL-FRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 28 tl~~~l-~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
++.+.+ .++++++|+++|+++. ++.+||.||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~ 80 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLN--DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARV 80 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEE
Confidence 344444 4557899999999875 5899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|+++..+.+++..+++.+++++++++++... +.... . .... .. .....
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~--~---------------------~~~~-----~~--~~~~~ 129 (458)
T PRK09029 81 LPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSALT--S---------------------LHLQ-----LV--EGAHA 129 (458)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhcc--c---------------------cccc-----cc--cccCc
Confidence 99999999999999999999999999876532 11000 0 0000 00 11122
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....++++++++|||||||.||+|.++|+++............+.. +++++..+|++|.+++. .++.++..|+++++
T Consensus 130 ~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~~~~l~~~p~~h~~g~~-~~~~~l~~G~~v~~ 206 (458)
T PRK09029 130 VAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTA--QDSWLLSLPLFHVSGQG-IVWRWLYAGATLVV 206 (458)
T ss_pred ccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCc--cceEEEecCcHhhhhhH-HHHHHHhCCceEEe
Confidence 3456889999999999999999999999999988766554444433 38999999999999985 67788999999998
Q ss_pred cCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCccc
Q 013850 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTE 346 (435)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE 346 (435)
.+. ..+++.+. ++|.+..+|+++..|...... ..++|.+++||+++++.+.+++.+. +.++++.||+||
T Consensus 207 ~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE 275 (458)
T PRK09029 207 RDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTE 275 (458)
T ss_pred CCh---HHHHHHHh--hceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccc
Confidence 874 45677774 799999999999999876543 3479999999999999999999765 599999999999
Q ss_pred ccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcc
Q 013850 347 TCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSF 426 (435)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~ 426 (435)
++........ ....++|+|+++++++|++ |||+++|+.++.| ||++++.+.... .++|
T Consensus 276 ~~~~~~~~~~----~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~g--Y~~~~~~~~~~~----~~~~ 333 (458)
T PRK09029 276 MASTVCAKRA----DGLAGVGSPLPGREVKLVD------------GEIWLRGASLALG--YWRQGQLVPLVN----DEGW 333 (458)
T ss_pred cCcceeccCC----CCCCCCCCCCCCCEEEEeC------------CEEEEecCceeee--eecCcccccccc----CCCc
Confidence 8865543322 1235699999999999976 8999999999999 999998876533 4789
Q ss_pred eecCCCCC
Q 013850 427 IRGKDQQT 434 (435)
Q Consensus 427 ~~tgD~~~ 434 (435)
|+|||+++
T Consensus 334 ~~TGD~~~ 341 (458)
T PRK09029 334 FATRDRGE 341 (458)
T ss_pred cCCCCcEE
Confidence 99999864
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=2.7e-45 Score=355.16 Aligned_cols=314 Identities=18% Similarity=0.238 Sum_probs=251.3
Q ss_pred ceeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEE
Q 013850 54 SLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 132 (435)
Q Consensus 54 ~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~ 132 (435)
-+.|+||.++++++|+.|++.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 46899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred ccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceee
Q 013850 133 VPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVIL 212 (435)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 212 (435)
+.+..... . . . .........++++++++|||||||.||+|.+
T Consensus 99 ~~~~~~~~------------~---------~------~-----------~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~ 140 (452)
T PRK07445 99 LDQLKLSH------------P---------P------P-----------LPSQGILPNLETGWIMIPTGGSSGQIRFAIH 140 (452)
T ss_pred cCcccccc------------C---------C------C-----------CCccccCCCCCCcEEEEeCCCCCCCCcEEEe
Confidence 76532100 0 0 0 0000112356899999999999999999999
Q ss_pred ccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHH
Q 013850 213 THKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPP 292 (435)
Q Consensus 213 t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~ 292 (435)
||+++............. .+++.++.+|++|.+|+. .++.++..|+++++.+............++++|++.++|+
T Consensus 141 t~~~l~~~~~~~~~~~~~---~~~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~ 216 (452)
T PRK07445 141 TWETLTASVQGFQRYFQL---QQVNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPT 216 (452)
T ss_pred chHHHHHHHHHHHHHhcC---CCCceEeccCchhhhhHH-HHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHH
Confidence 999998876655444333 235678899999999995 7888999999999886332222234445788999999999
Q ss_pred HHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCC
Q 013850 293 IILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAG 372 (435)
Q Consensus 293 ~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~ 372 (435)
++..|.+.. ...+++||.+++||+++++++.+++++. +.++++.||+||++..+....+.+......++|+|+++
T Consensus 217 ~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~ 291 (452)
T PRK07445 217 QLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPH 291 (452)
T ss_pred HHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCCcCCccCCC
Confidence 999998732 3357899999999999999999988764 59999999999988665544333222346789999999
Q ss_pred cEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 373 VEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 373 ~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
++++|+ .|+.|||+++|+.++.| ||+++. ..++||+|||+++
T Consensus 292 ~~v~i~---------~g~~Gel~v~g~~~~~g--Y~~~~~---------~~~g~~~TGDl~~ 333 (452)
T PRK07445 292 AQITIP---------ANQTGNITIQAQSLALG--YYPQIL---------DSQGIFETDDLGY 333 (452)
T ss_pred CeEEEc---------CCCcceEEEeCCccchh--hcCCcc---------CCCCEEECCCEEE
Confidence 999997 36789999999999999 997543 2367888888763
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=5.9e-44 Score=346.39 Aligned_cols=329 Identities=26% Similarity=0.345 Sum_probs=266.0
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccc
Q 013850 56 SFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (435)
Q Consensus 56 Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~ 135 (435)
||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccH
Q 013850 136 LWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHK 215 (435)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~ 215 (435)
..... ... ..+..+...... ..........+++++++|||||||.||+|.++|+
T Consensus 81 ~~~~~------~~~-------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~ 134 (436)
T TIGR01923 81 LEEKD------FQA-------------------DSLDRIEAAGRY-ETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFR 134 (436)
T ss_pred ccccc------eee-------------------cchHhhhhcccc-cccccccCCcCceEEEEeCCCCCCCCcEEEEehH
Confidence 42110 000 011111111110 1111234567899999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHH
Q 013850 216 NFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIIL 295 (435)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~ 295 (435)
++...+.......... .+|++++.+|++|..++. .++.++..|+++++.+.++ .+++.++++++|++.++|+++.
T Consensus 135 ~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~~~~~P~~l~ 209 (436)
T TIGR01923 135 NHYASAVGSKENLGFT--EDDNWLLSLPLYHISGLS-ILFRWLIEGATLRIVDKFN--QLLEMIANERVTHISLVPTQLN 209 (436)
T ss_pred HHHHHHHHHHhhcCCC--CCceEEEccCcHhHHHHH-HHHHHHhcCceEEecchHH--HHHHHHHHhCCeEEEeHHHHHH
Confidence 9988877665544433 339999999999999984 7889999999999997653 9999999999999999999999
Q ss_pred HHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEE
Q 013850 296 ALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEA 375 (435)
Q Consensus 296 ~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 375 (435)
.|.+.... .+++|.++++|+++++++.+.+++. +.++++.||+||++.............+. .+|.|++++++
T Consensus 210 ~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~-~~G~~~~~~~~ 282 (436)
T TIGR01923 210 RLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHARP-DVGRPLAGREI 282 (436)
T ss_pred HHHhCcCC----CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCcccccccc-CCCccCCCcEE
Confidence 99886532 2689999999999999999998765 59999999999998766554433222223 48999999999
Q ss_pred EEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccccccCcceecCCCCC
Q 013850 376 QIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 376 ~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+|.+.+. ++.|||+++|+.++.| ||++++.+...+ .++||+|||+++
T Consensus 283 ~i~~~~~------~~~Gel~v~~~~~~~g--y~~~~~~~~~~~----~~~~~~TGD~~~ 329 (436)
T TIGR01923 283 KIKVDNK------EGHGEIMVKGANLMKG--YLYQGELTPAFE----QQGWFNTGDIGE 329 (436)
T ss_pred EEEeCCC------CCceEEEEECCccchh--hCCChhhhhhhh----cCCCeeccceEE
Confidence 9944222 2779999999999999 999888876654 357888888763
No 116
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-43 Score=337.43 Aligned_cols=409 Identities=24% Similarity=0.310 Sum_probs=316.5
Q ss_pred CCCCCCCCCCCchHHHHHhhc-c-cCCCceeeeecCC----CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC
Q 013850 17 PPLVLPSDPSFSMVHFLFRNS-A-SYSSKLALIDADS----DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI 90 (435)
Q Consensus 17 ~~~~~~~~~~~tl~~~l~~~~-~-~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~ 90 (435)
++...... .+..+.+..+. + ..+++++++.... ...+||+|+.+++.++|+.|++.|+++||+|++++|+.+
T Consensus 55 ~~w~~g~~--ln~~~n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~ 132 (626)
T KOG1175|consen 55 TKWFPGAF--LNACYNCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIP 132 (626)
T ss_pred ccccccch--hhhhHhhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCCh
Confidence 33344443 55555554443 2 3588888875532 245899999999999999999889999999999999999
Q ss_pred cHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccc------cc-ccc
Q 013850 91 HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSS------SG-LIS 163 (435)
Q Consensus 91 ~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~ 163 (435)
++++++|||+++|++..++-..+++.++...++.+++++|++.+......+......++...-..... .. ...
T Consensus 133 e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~ 212 (626)
T KOG1175|consen 133 EAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVS 212 (626)
T ss_pred HHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEe
Confidence 99999999999999999999999999999999999999999998766655444422111110000000 00 000
Q ss_pred ccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecch
Q 013850 164 RSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLP 243 (435)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~ 243 (435)
.......+++++.... ...++...+.+|+.+|+|||||||.||++.+++.......... ....+....+|++++...
T Consensus 213 ~~~~d~~~~~~~~~a~--~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~-~~~~~d~q~~dv~~~~~d 289 (626)
T KOG1175|consen 213 RRNRDLFWSLELKKAS--PEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALT-SRYHFDLQPSDVLWCASD 289 (626)
T ss_pred cccccccHHHHhhhcC--CCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhh-cceeccCCCcceEEEecc
Confidence 1111335555555544 5555888899999999999999999999999988765553322 222233344499999999
Q ss_pred HHHHHHHHHHHHhhhhcCcEEEecC--CCCHHHHHHHHHhcCceEEEecHHHHHHHHhccccc--CCCCcceeEEEecCC
Q 013850 244 MFHVFGLSVILYDQLQKGNCVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR--KFDISSLKLVGSGAA 319 (435)
Q Consensus 244 l~~~~g~~~~~~~~l~~G~~i~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~i~~gG~ 319 (435)
..|+.+.++..+.+|.+|+++++.+ ++++..+++.+.++++|.+++.|+.++.|.+..... .+++++||.+.++||
T Consensus 290 ~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Ge 369 (626)
T KOG1175|consen 290 LGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGE 369 (626)
T ss_pred cCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCc
Confidence 9999999988999999999999985 459999999999999999999999999887764443 344567999999999
Q ss_pred CCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCC-CceeEEEeC
Q 013850 320 PLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPN-QLGEIWVRG 398 (435)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g-~~Gei~v~g 398 (435)
++.++..+++.+.++..++++.||+||+|+.+....+.....++++.+.|.+|+.+.|.| ++|..++.+ +.|+|+++.
T Consensus 370 pi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~ 448 (626)
T KOG1175|consen 370 PINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKP 448 (626)
T ss_pred cCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeC
Confidence 999999999999998447999999999999888766663347899999999999999999 588888876 899999988
Q ss_pred C---CccccccccCCcccccccccccccCcceecCCCCC
Q 013850 399 P---NVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 434 (435)
Q Consensus 399 ~---~~~~g~~y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 434 (435)
+ +.+.+ ||+|++.-... .+.+-.||+.|||+++
T Consensus 449 ~~P~~~~r~--~~~n~erf~~~-yf~k~pg~y~tGD~~~ 484 (626)
T KOG1175|consen 449 PWPPGMFRT--LWGNHERFRAA-YFKKFPGYYFTGDGGR 484 (626)
T ss_pred CCCcccccc--ccCCHHHhhhh-hcccCCceEEecCceE
Confidence 5 67899 99999932221 2333467888998874
No 117
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.7e-43 Score=347.97 Aligned_cols=338 Identities=18% Similarity=0.197 Sum_probs=246.3
Q ss_pred cCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcccc------HHHHhhc----CCCcEEeccCCc
Q 013850 86 APNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL------WDKVKDL----NLPAVLLGSKDK 155 (435)
Q Consensus 86 ~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~------~~~~~~~----~~~~~~~~~~~~ 155 (435)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+... ....+++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998643 1111111 111122211110
Q ss_pred ccccccccccccccchhhhhhhcCC-----CCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh
Q 013850 156 VSSSGLISRSSKIVSFHDLIELSGS-----VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL 230 (435)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~ 230 (435)
.... ........+++++..... .....+....++++++|+|||||||.||+|++||+++............+
T Consensus 81 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~ 157 (499)
T PLN03051 81 PVAV---PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDI 157 (499)
T ss_pred ccCC---ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCC
Confidence 0000 000112345555422110 00111222356899999999999999999999999987764433333333
Q ss_pred ccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEEEecHHHHHHHHhccc--ccCCC
Q 013850 231 VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFD 307 (435)
Q Consensus 231 ~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~--~~~~~ 307 (435)
..+|++++.+|++|..++. .++.++..|+++++.+ .+++..+++.|+++++|++.++|+++..|++... ....+
T Consensus 158 --~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~ 234 (499)
T PLN03051 158 --QPGDVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLD 234 (499)
T ss_pred --CCCCEEEEccCcceeeehH-HHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCC
Confidence 2349999999999999974 7888999999999886 4788999999999999999999999999987653 34557
Q ss_pred CcceeEEEecCCCCcHHHHHHHHhhCC-CCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccC
Q 013850 308 ISSLKLVGSGAAPLGKELMEDCQKNIP-GATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPL 386 (435)
Q Consensus 308 l~~lr~i~~gG~~l~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~ 386 (435)
+++||.+++||+++++++.+++++.++ ++++++.||+||+++.+....... ..+.+++|+|.++++++|+| ++++++
T Consensus 235 ~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~ivd-~~g~~~ 312 (499)
T PLN03051 235 WSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQ-PQAPGAFSTASLGTRFVLLN-DNGVPY 312 (499)
T ss_pred chhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccC-CCCCccccCCCCCceEEEEC-CCCCCC
Confidence 889999999999999999988877432 378999999999875443322221 33567899999999999999 688999
Q ss_pred CCC--CceeEEEeCCCc--cccccccCCcccccccc-c--cc--ccCcceecCCCCC
Q 013850 387 PPN--QLGEIWVRGPNV--TPGIVYINFFVFTLFLW-G--CE--HTDSFIRGKDQQT 434 (435)
Q Consensus 387 ~~g--~~Gei~v~g~~~--~~g~~y~~~~~~~~~~~-~--~~--~~~~~~~tgD~~~ 434 (435)
+.| ++|||+++||.+ +.| ||+++. +...+ + |+ ....||+|||+++
T Consensus 313 ~~g~~~~Gel~v~g~~~~~~~g--y~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~ 366 (499)
T PLN03051 313 PDDQPCVGEVALAPPMLGASDR--LLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMK 366 (499)
T ss_pred CCCCCcceEEEEecCcCCCCcc--ccCCcc-cceeeecCCccccCCcceeecCCeEE
Confidence 988 589999999976 589 998653 33222 2 22 1224789999874
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-41 Score=323.32 Aligned_cols=288 Identities=17% Similarity=0.146 Sum_probs=242.8
Q ss_pred eeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhc
Q 013850 46 LIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDS 125 (435)
Q Consensus 46 ~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~ 125 (435)
++.. ++.+||.||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+++..+++++
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~ 78 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRA 78 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhC
Confidence 4444 479999999999999999985 6899999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCCCCCCCCEEEEEeCCCCCC
Q 013850 126 NPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 205 (435)
Q Consensus 126 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 205 (435)
+++++++++.... . . . .....++++++++|||||||
T Consensus 79 ~~~~~i~~~~~~~----------~-------------~-------------------~--~~~~~~~~~~~i~~TSGtTG 114 (414)
T PRK08308 79 GCHGLLYGESDFT----------K-------------L-------------------E--AVNYLAEEPSLLQYSSGTTG 114 (414)
T ss_pred CCCEEEecCcccc----------c-------------c-------------------c--CCCCCCCCceEEEECCCCCC
Confidence 9999998763100 0 0 0 01235688999999999999
Q ss_pred CccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCCHHHHHHHHHhcCce
Q 013850 206 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVT 285 (435)
Q Consensus 206 ~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t 285 (435)
.||+|.++|+++.+.+......... ..+|+++..+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|
T Consensus 115 ~PKgv~~s~~~l~~~~~~~~~~~~~--~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t 192 (414)
T PRK08308 115 EPKLIRRSWTEIDREIEAYNEALNC--EQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQH 192 (414)
T ss_pred CCcEEEEehHhHHHHHHHHHHhhCC--CcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCe
Confidence 9999999999998877665554443 33489999999999999877899999999999999889999999999999999
Q ss_pred EEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCC
Q 013850 286 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGS 365 (435)
Q Consensus 286 ~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 365 (435)
.+.++|+++..|.+.... ..+++.++.+|+++++++.+++++. +.++++.||+||++.+.... . ....++
T Consensus 193 ~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~--~--~~~~~~ 262 (414)
T PRK08308 193 ILYAVPLMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICP--D--MKSHLD 262 (414)
T ss_pred EEEcCHHHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecC--C--CCCCCc
Confidence 999999999999876432 2378899999999999999999987 47999999999988644322 1 235678
Q ss_pred cccccCCcEEEEEeCCCCccCCCCCceeEEEeCC
Q 013850 366 AGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP 399 (435)
Q Consensus 366 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~ 399 (435)
+|+|++++++++.+. .++.|||++++.
T Consensus 263 ~G~p~~~~~~~~~~~-------~~~~gel~v~~~ 289 (414)
T PRK08308 263 LGNPLPHVSVSAGSD-------ENAPEEIVVKMG 289 (414)
T ss_pred cCccCCCeEEEEecC-------CCCCceEEEEcC
Confidence 999999999998752 256799999763
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.8e-40 Score=348.23 Aligned_cols=376 Identities=13% Similarity=0.071 Sum_probs=279.3
Q ss_pred CchHHHHHhhcccCCCceeeeec-CCC--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcC
Q 013850 27 FSMVHFLFRNSASYSSKLALIDA-DSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~-~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 103 (435)
.|+.++|.+.++++|+++|+... +.+ +++||+|+.++++++|++|+++|+++||+|+|+++|+++|+++.+||+++|
T Consensus 427 ~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~G 506 (1452)
T PTZ00297 427 RSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYG 506 (1452)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 79999999999999999999742 113 689999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcC---CCcEEeccCCcc-cc-cccccccccccchhhhhhhc
Q 013850 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN---LPAVLLGSKDKV-SS-SGLISRSSKIVSFHDLIELS 178 (435)
Q Consensus 104 ~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 178 (435)
++.+|+.+ +.+++.++++.++++++|++.+....+.... .+.+++...... .. ...........+|+++++.+
T Consensus 507 aV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G 584 (1452)
T PTZ00297 507 FTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKG 584 (1452)
T ss_pred CEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcC
Confidence 99999975 4678999999999999999988777665543 334444321100 00 00001112356788888765
Q ss_pred CCCCCCCCCCCCCCCEEEEEe---CCCCCCCccceeeccHHHHHHHHHHHhhhhhc-cCCCcEEEecchHHHHHHHHHHH
Q 013850 179 GSVTDIPDVSVKQTDAAALLY---SSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVIL 254 (435)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~i~~---TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~~~d~~l~~~~l~~~~g~~~~~ 254 (435)
............++|++.|+| ||||||.||||++||+|+++.+.......... ...+|++++++|++|+++.. ..
T Consensus 585 ~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~-~~ 663 (1452)
T PTZ00297 585 RLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRV-FV 663 (1452)
T ss_pred cccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHH-HH
Confidence 421112233457889999985 99999999999999999999987654432211 12349999999999999974 67
Q ss_pred HhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhccccc--------------------------CC-C
Q 013850 255 YDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR--------------------------KF-D 307 (435)
Q Consensus 255 ~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--------------------------~~-~ 307 (435)
+.++..|+++.+ +++..+++.|++++||++.++|++|..+.+....+ .. .
T Consensus 664 ~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~~~ 740 (1452)
T PTZ00297 664 LGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRRDS 740 (1452)
T ss_pred HHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 788999999875 36899999999999999999999998775531110 00 0
Q ss_pred ---------------CcceeEEEecCC--CCcHHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCccccc
Q 013850 308 ---------------ISSLKLVGSGAA--PLGKELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLV 370 (435)
Q Consensus 308 ---------------l~~lr~i~~gG~--~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 370 (435)
-.++|.+++||+ +++..+.. +.+++.+||.||+. +.+.+. ..+ ..|.|+
T Consensus 741 ~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~-------~i~i~~g~glTE~~---~~~~~~--~~~--~~G~Pl 806 (1452)
T PTZ00297 741 SLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE-------HISVCYVPCLREVF---FLPSEG--VFC--VDGTPA 806 (1452)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC-------CceEEEecceEEee---eecCCC--Ccc--cCCeec
Confidence 046888888873 44433322 37788899999943 223222 222 349999
Q ss_pred CCcEEEEEeC-CCCccCCCCCceeEEEeCCCccccccccCCcccccccc-cccccCcceecCCCCCC
Q 013850 371 AGVEAQIVSV-DTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW-GCEHTDSFIRGKDQQTD 435 (435)
Q Consensus 371 ~~~~~~i~d~-~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~-~~~~~~~~~~tgD~~~d 435 (435)
|++++||.+. |.+. .+..|||++ + |+++|+.|.+.+ +|++ +|+++.-||.||
T Consensus 807 pgvEvKI~~~~E~~~---~~~~GEIlv-------r--~~kdpe~T~e~~~gW~~-dG~L~IidRkKd 860 (1452)
T PTZ00297 807 PSLQVDLEPFDEPSD---GAGIGQLVL-------A--KKGEPRRTLPIAAQWKR-DRTLRLLGPPLG 860 (1452)
T ss_pred CceEEEEcccccccC---CCCCCeEEE-------E--ECCChHHHHHhhCcCcc-CCeEEEEecccc
Confidence 9999999863 3322 134699999 4 678999999876 7775 578888888886
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5e-36 Score=304.48 Aligned_cols=373 Identities=22% Similarity=0.288 Sum_probs=301.0
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
.++.+.|..++...|++.|++.. +..+||+++..+++++|+.|.+.|+.++++|+++.+++.+++++++|++++|+.+
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~~--~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~y 304 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVRG--GQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAY 304 (642)
T ss_pred chHHHHHHHHHHhCCCceeEecC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeE
Confidence 68999999999999999999987 5899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCC
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (435)
+|+++.++.+++..+++.++++.+++............. + ..+........ .....
T Consensus 305 vP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~-------------------~~~~~~~~~~~-~~~~~ 360 (642)
T COG1020 305 VPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG----L-------------------ALDDALSEIPD-TDPIP 360 (642)
T ss_pred ecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc----c-------------------ccccccccCCc-cCccc
Confidence 999999999999999999999999998333221111100 0 00000000000 01112
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....+++.++++|||||||.||||..+|+++.+...+....... ..+|+++...++....... .++.++..|+++++
T Consensus 361 ~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~--~~~d~~l~~~s~~fD~~~~-~~f~~l~~G~~l~~ 437 (642)
T COG1020 361 QALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGL--DADDRVLALASLSFDASVF-EIFGALLEGARLVL 437 (642)
T ss_pred ccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCC--CcccEEeecCCcccchhHH-HHHHHHhCCCEEEe
Confidence 34456899999999999999999999999999865555444333 3338999999997777774 89999999999999
Q ss_pred cCC---CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccC--CCCcceeEEEecCCCCcHHHHHHHHhhCC-CCeeec
Q 013850 267 MGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIP-GATIFQ 340 (435)
Q Consensus 267 ~~~---~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~i~~gG~~l~~~~~~~~~~~~~-~~~~~~ 340 (435)
.+. .++..+.+.+.++++|++..+|.++..+........ ...+.+|.+++||+.++..+..++....+ ...+.+
T Consensus 438 ~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~ 517 (642)
T COG1020 438 APALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLN 517 (642)
T ss_pred cCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEee
Confidence 963 589999999999999999999999999988632222 22335999999999999999999988764 478999
Q ss_pred CcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccccc
Q 013850 341 GYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC 420 (435)
Q Consensus 341 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~ 420 (435)
.||.||+..................+|+|+++..+.|+| +.+++++.|..||+++.|.++..| |++.|+.|.+.|-.
T Consensus 518 ~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~g--y~~~p~lt~~~f~~ 594 (642)
T COG1020 518 LYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALG--YLNRPDLTAERFIA 594 (642)
T ss_pred ccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhh--hcCChhhhHHHhhh
Confidence 999999665444332221111156899999999999999 799999999999999999999999 99999999999832
Q ss_pred cccCcceecCCCCC
Q 013850 421 EHTDSFIRGKDQQT 434 (435)
Q Consensus 421 ~~~~~~~~tgD~~~ 434 (435)
. .+|+|||+++
T Consensus 595 ~---~~y~tgD~~r 605 (642)
T COG1020 595 L---RLYRTGDLAR 605 (642)
T ss_pred c---cCccCCCeee
Confidence 2 3999999875
No 121
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=2.4e-28 Score=212.82 Aligned_cols=220 Identities=19% Similarity=0.137 Sum_probs=164.6
Q ss_pred HHhhcccCCCceeeeec-C---CCcceeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEE
Q 013850 33 LFRNSASYSSKLALIDA-D---SDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (435)
Q Consensus 33 l~~~~~~~p~~~a~~~~-~---~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 107 (435)
|++.++.+|+++|++.. + .+.++||+||.++++++|+.|++ .|+++||+|+|+++|+++++++++||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56778899999999743 2 23579999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCCCCCCCC
Q 013850 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDV 187 (435)
Q Consensus 108 ~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (435)
|+| .+++++++++++..+.+.. ......+...... .....+...+..++.+...... ....+.
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 144 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG-SGEVVALSLDPLG-RRVAGELPPGVIDFAPEVRVHG--DQFAPY 144 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc-CCceEEEeccccc-cCCCCCCCCcccchhhhhhccC--CCCCCC
Confidence 995 6799999999888777542 2222222110000 0000011223345555554322 222222
Q ss_pred -CCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 188 -SVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 188 -~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
...++|++.|+||||+ +|++++... ....+ ..+|+++ .+|++|.+|+...++.++..|+++++
T Consensus 145 ~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l--~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~ 208 (227)
T TIGR03089 145 EPPDATAPALVAGGGEW---------TGAELVAAA----RAAGL--PPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVL 208 (227)
T ss_pred CCCCCCcceeeeccccc---------cHHHHHHHH----hhcCC--CCCCeEE-ecCCCchHHHHHHHHHHhccCceEEE
Confidence 4567999999999985 566665553 22223 3349999 99999999998789999999999999
Q ss_pred cCCCCHHHHHHHHHhcCce
Q 013850 267 MGKFDIEMALRAIEKYRVT 285 (435)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t 285 (435)
.+.|++..+++.|+++|||
T Consensus 209 ~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 209 VTHPDPARLDQIAETERVT 227 (227)
T ss_pred ecCCCHHHHHHHHHhhcCC
Confidence 9999999999999999987
No 122
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.96 E-value=6e-28 Score=227.82 Aligned_cols=209 Identities=24% Similarity=0.320 Sum_probs=169.2
Q ss_pred CCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 187 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
....++++++++|||||||.||+|.++|+++.......... +. ..++++..+|++|.+++. .++.++..|+++++
T Consensus 30 ~~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~--~~--~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v~ 104 (358)
T PRK07824 30 GEPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR--LG--GPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPVE 104 (358)
T ss_pred CCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc--cC--CCCeEEEECChHHHHHHH-HHHHHHHcCCeEEe
Confidence 34457899999999999999999999999998876543332 21 237899999999999985 67788888998887
Q ss_pred ---cCCCCHHHHHHHHHhcC--ceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecC
Q 013850 267 ---MGKFDIEMALRAIEKYR--VTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQG 341 (435)
Q Consensus 267 ---~~~~~~~~~~~~l~~~~--~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~ 341 (435)
...+++..+++.+++++ .++...+|..+..++..... ...++++|.+++||+++++++.+++.+. ++++++.
T Consensus 105 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~ 181 (358)
T PRK07824 105 LDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRT 181 (358)
T ss_pred cCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEec
Confidence 34678999999999998 56677789888877765432 3467899999999999999999998864 5999999
Q ss_pred cCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCccccccccccc
Q 013850 342 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 421 (435)
Q Consensus 342 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~~~~ 421 (435)
||+||++..+. ..|.|++++++++.| |||+++|+.++.| |+++++.+. +
T Consensus 182 YG~TE~~~~~~------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~g--Y~~~~~~~~--~--- 230 (358)
T PRK07824 182 YGMSETSGGCV------------YDGVPLDGVRVRVED------------GRIALGGPTLAKG--YRNPVDPDP--F--- 230 (358)
T ss_pred ccCCccCCCcC------------cCceeCCCCEEEecC------------CEEEEecCccccc--cCCCccccc--c---
Confidence 99999875431 348899999999843 8999999999999 999887542 2
Q ss_pred ccCcceecCCCCC
Q 013850 422 HTDSFIRGKDQQT 434 (435)
Q Consensus 422 ~~~~~~~tgD~~~ 434 (435)
..+|||+|||+++
T Consensus 231 ~~~g~~~TGDl~~ 243 (358)
T PRK07824 231 AEPGWFRTDDLGA 243 (358)
T ss_pred cCCCceecccEEE
Confidence 2467999999764
No 123
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.94 E-value=2.6e-25 Score=216.78 Aligned_cols=390 Identities=16% Similarity=0.187 Sum_probs=274.7
Q ss_pred CchHHHHHhhcccCCCceeeeecC----CCcceeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013850 27 FSMVHFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIA 101 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~-g~~~gd~V~l~~~~~~~~~~~~lA~~~ 101 (435)
.++.|+|+.+++.+|+.+|+...+ .+..+||.+|..++.+++..|... -+++||.|+|++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 689999999999999999997553 227899999999999999999754 679999999999999999999999999
Q ss_pred cCcEEEecCCCCC------HHHHHHHHHhcCCeEEEEccccHHHHhhcCC---------CcEEeccCCcccccccccccc
Q 013850 102 IGAIASTANPVYT------VSELSKQVKDSNPKLVITVPELWDKVKDLNL---------PAVLLGSKDKVSSSGLISRSS 166 (435)
Q Consensus 102 ~G~~~v~i~~~~~------~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 166 (435)
+|.+++|+.|.-. ...+..+++.+++..|+++......++.... ..++...+ ..
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~----------~~- 918 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPK----------LP- 918 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccc----------cc-
Confidence 9999999988653 3667889999999999999876665544321 11111111 00
Q ss_pred cccchhhhhh-hcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHH
Q 013850 167 KIVSFHDLIE-LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMF 245 (435)
Q Consensus 167 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~ 245 (435)
.++..... ........++...++..+|++-+.--++|.--++.++|..+++......+...+... .-++.+.+.+
T Consensus 919 --~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~--rpl~~~~~~~ 994 (1363)
T KOG3628|consen 919 --ETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKS--RPLLGCSSPY 994 (1363)
T ss_pred --hhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccC--CceEEEecCc
Confidence 00110000 000011122334466889999999899999999999999999998887777777555 6677777777
Q ss_pred HHHHHHHHHHhhhhcCcEEEecCC----CCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcce------eEEE
Q 013850 246 HVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSL------KLVG 315 (435)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~l------r~i~ 315 (435)
...|+..+.+..++.|.+.++.++ -|+..+++.++++++.-++.+=..+..+.+.-..+..+++.. ..++
T Consensus 995 sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv 1074 (1363)
T KOG3628|consen 995 SGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVV 1074 (1363)
T ss_pred cchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceee
Confidence 777888889999999999777754 379999999999999999988888887777544433333221 2333
Q ss_pred ecCCCCcHHHHHHHHhhCCC-----CeeecCcCcccccccccccCCC--------CC----CcC-------------CCC
Q 013850 316 SGAAPLGKELMEDCQKNIPG-----ATIFQGYGMTETCAPISLENPL--------VG----VRR-------------SGS 365 (435)
Q Consensus 316 ~gG~~l~~~~~~~~~~~~~~-----~~~~~~yG~tE~~~~~~~~~~~--------~~----~~~-------------~~~ 365 (435)
..-+.....+.+-+.+.|.. ..+.-.|++-=--.++...+.. +. ..+ ...
T Consensus 1075 ~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~d 1154 (1363)
T KOG3628|consen 1075 PAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYD 1154 (1363)
T ss_pred ecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCcccccc
Confidence 34445455666666665531 2233334433211121111100 00 000 012
Q ss_pred cccccCCcEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccc-cc------cccccCcceecCCCC
Q 013850 366 AGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLF-LW------GCEHTDSFIRGKDQQ 433 (435)
Q Consensus 366 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~-~~------~~~~~~~~~~tgD~~ 433 (435)
.|+..+++++.|++||+..+|..|+.||||+.|.+-+.+ |++-.+..+. .| |...+..|.||||++
T Consensus 1155 SG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~--~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LG 1227 (1363)
T KOG3628|consen 1155 SGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASC--SFTIGDELRSNHFNARLSSGDLLGKSYARTGDLG 1227 (1363)
T ss_pred CCcccccceeEEeCCccccccccCCcceEEecccccccc--ccccCchhhhhhhhhhccccccccccceeeeeee
Confidence 388889999999999999999999999999999998888 7764332211 11 555556899999987
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.94 E-value=1.4e-25 Score=216.01 Aligned_cols=203 Identities=19% Similarity=0.198 Sum_probs=153.9
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~ 268 (435)
.+++++++++||||||.||+|.++|.++............... ..+|++++..+..+..+.+...+.++..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 4567889999999999999999999998766443333222222 233888877665544443334566778899998887
Q ss_pred CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCC--CcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCccc
Q 013850 269 KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFD--ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTE 346 (435)
Q Consensus 269 ~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~--l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE 346 (435)
..++..+++.|+++++|++.++|+++..|++.....+.+ ..++|.+++|||++++++.+.+++.|+ +++++.||+||
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g-~~v~~~YG~tE 231 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLG-MKATDIYGLSE 231 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhC-CceEecccchh
Confidence 778899999999999999999999999998765443332 358999999999999999999999997 99999999999
Q ss_pred ccc-cccccCCCCCCcCCCCccccc--CCcEEEEEeCCCCccCCCCCceeEEEeCC
Q 013850 347 TCA-PISLENPLVGVRRSGSAGTLV--AGVEAQIVSVDTLKPLPPNQLGEIWVRGP 399 (435)
Q Consensus 347 ~~~-~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~~~~~~~~g~~Gei~v~g~ 399 (435)
+++ .+...+.. ...|.++ +++.++|+|+++++++++|+.|||++++.
T Consensus 232 ~~~~~~~~~~~~------~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~ 281 (422)
T TIGR02155 232 VIGPGVAMECVE------TQDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL 281 (422)
T ss_pred hcCCceeecccc------cCCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC
Confidence 853 22222111 1123333 45778899988999999999999999874
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.91 E-value=6.4e-23 Score=197.73 Aligned_cols=199 Identities=20% Similarity=0.205 Sum_probs=151.7
Q ss_pred CCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec
Q 013850 189 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (435)
Q Consensus 189 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~ 267 (435)
...++++.+.+||||||.||+|.+||+++..........+.... ..+|+++...+..+..+.....+.++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 35678899999999999999999999998776554443332112 23388988888887766644456677888887654
Q ss_pred CCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCC--CCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcc
Q 013850 268 GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKF--DISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMT 345 (435)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~--~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~t 345 (435)
.. ....++.++++++|.+.++|+.+..|++.....+. ...++|.+++|||++++++.+.+.+.|+ +++++.||+|
T Consensus 163 ~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g-~~v~~~YG~T 239 (445)
T TIGR03335 163 GK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWG-CEVYNTYGST 239 (445)
T ss_pred Cc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhC-CcEEecCChh
Confidence 43 34678999999999999999998888765443332 2368999999999999999999999996 9999999999
Q ss_pred cccccccccCCCCCCcCCCCccccc--CCcEEEEEeCCCCccCCCCCceeEEEeCC
Q 013850 346 ETCAPISLENPLVGVRRSGSAGTLV--AGVEAQIVSVDTLKPLPPNQLGEIWVRGP 399 (435)
Q Consensus 346 E~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~~~~~~~~g~~Gei~v~g~ 399 (435)
|++. +. .+ .. ..|..+ +.+.++|+|++++.++++|+.|||++++-
T Consensus 240 E~~~-~~-~c-----~~--~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L 286 (445)
T TIGR03335 240 EGTM-CG-EC-----QA--VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTL 286 (445)
T ss_pred hhhh-eE-Ee-----cC--CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEec
Confidence 9752 22 11 11 123444 45789999998899999999999999875
No 126
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.90 E-value=1.7e-22 Score=190.00 Aligned_cols=171 Identities=17% Similarity=0.108 Sum_probs=137.1
Q ss_pred CCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecCCCC
Q 013850 192 TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD 271 (435)
Q Consensus 192 ~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~~~~ 271 (435)
+..++++|||||||.||+|.++|+++.+.+..............+++++.+|++|.+|+.+.++.++..|+++++...++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 55889999999999999999999999988766555444422323789999999999998767888999999999998888
Q ss_pred HHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCcccccccc
Q 013850 272 IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETCAPI 351 (435)
Q Consensus 272 ~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~ 351 (435)
+..+++.++.+ |++.++|++++.|.+.. .+++++|. ++||+++++++.+.+++. +...+++.||+||++++.
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~ 246 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIG 246 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccc
Confidence 88888888653 89999999999998753 35677886 678999999999999886 325799999999998765
Q ss_pred cccCCCCCCcCCCCcccccCCcEEEE
Q 013850 352 SLENPLVGVRRSGSAGTLVAGVEAQI 377 (435)
Q Consensus 352 ~~~~~~~~~~~~~~~G~~~~~~~~~i 377 (435)
.... ++..|.++|++++++
T Consensus 247 ~~~~-------~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 247 LREA-------PDDPFRLLPDLACFA 265 (386)
T ss_pred cccC-------CCCCcccCCCccccC
Confidence 4321 234577888877654
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.79 E-value=7.1e-18 Score=155.07 Aligned_cols=206 Identities=22% Similarity=0.181 Sum_probs=158.2
Q ss_pred CCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCC-CcEEEecchHHHHHHHHHHHHhhhhcCcEEEe
Q 013850 188 SVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (435)
Q Consensus 188 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~ 266 (435)
...-++...|-.||||||+|+.+..++..+......+...+...... +|++..+....-..|-...-+.+-..|++++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 34456777799999999999999999999988877777666555433 37766665532222221122334446777777
Q ss_pred cCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccC--CCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCc
Q 013850 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGM 344 (435)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~ 344 (435)
..+-+.+..+++++++++|++.++|+.+..|++.....+ ..-.+||.+++|+|+++++..+.+.+.|+ +..++.||+
T Consensus 166 ~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g-~~~~diYGl 244 (438)
T COG1541 166 ISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFG-CKAFDIYGL 244 (438)
T ss_pred cCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhC-Cceeecccc
Confidence 766688999999999999999999999999999877764 23358999999999999999999999997 999999999
Q ss_pred ccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCC
Q 013850 345 TETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP 399 (435)
Q Consensus 345 tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~ 399 (435)
||..+.....+.. ..-....-+...++|+||++++.++.|+.|||++..=
T Consensus 245 tE~~g~g~~eC~~-----~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L 294 (438)
T COG1541 245 TEGFGPGAGECTE-----RNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTL 294 (438)
T ss_pred ccccCCccccccc-----ccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEec
Confidence 9988775332222 1112223367888999999999999999999998763
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.75 E-value=3.2e-17 Score=165.39 Aligned_cols=308 Identities=18% Similarity=0.154 Sum_probs=200.8
Q ss_pred chHHHHHhhcccCCCceeeeecC----CC--cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013850 28 SMVHFLFRNSASYSSKLALIDAD----SD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIA 101 (435)
Q Consensus 28 tl~~~l~~~~~~~p~~~a~~~~~----~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 101 (435)
++...+.+.+.+.|...+..+.. .+ ..+||++....++.+++.|...|...|+.|++++..+.++++..++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 55666777788888887775331 12 6899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCC----HHHHHHHHH-hcCCeEEEEccccHHHHhhcC-CCcEEeccCCcccccccccccccccchhhhh
Q 013850 102 IGAIASTANPVYT----VSELSKQVK-DSNPKLVITVPELWDKVKDLN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLI 175 (435)
Q Consensus 102 ~G~~~v~i~~~~~----~~~~~~~l~-~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (435)
+|.++++++|.++ +.++..+.. ......-+......-.+.... .+.. ........|..+.
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~--------------sv~~~~~~f~~~~ 182 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKL--------------SVETIADSFQMVL 182 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhcccccc--------------chhhccchhhhhh
Confidence 9999999999999 332221111 111111111111100000000 0000 0000011222211
Q ss_pred hhcCCCCCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHH
Q 013850 176 ELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILY 255 (435)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~ 255 (435)
. ...........++..+.+.||||+||.||+|..+|..+.....+......... .+++-.....+........+.
T Consensus 183 ~---~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~--s~~~~~~~~~~~~d~i~~~~~ 257 (1032)
T KOG1178|consen 183 H---NEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTG--SDRFTFKTSVYFDDTIQKFIG 257 (1032)
T ss_pred c---cCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCc--cchhhhhheeecccchHHHHh
Confidence 1 11223334567788999999999999999999999999998776655533322 254422223322222222344
Q ss_pred hhhhcCcEEEecCCC---CHHHHHHHHHhcCceEEEecHHHHHHHHhccccc-------------CCCCcceeEEEecCC
Q 013850 256 DQLQKGNCVVSMGKF---DIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR-------------KFDISSLKLVGSGAA 319 (435)
Q Consensus 256 ~~l~~G~~i~~~~~~---~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~-------------~~~l~~lr~i~~gG~ 319 (435)
..|..|+.+..+... ++..+.+.+++++++..+.+|++.++++...... ....+.||....+|+
T Consensus 258 ~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~e 337 (1032)
T KOG1178|consen 258 ALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGE 337 (1032)
T ss_pred hHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCC
Confidence 555566666655332 3799999999999999999999988887754331 112348999999999
Q ss_pred CCcHHHHHHHHhhCCCCeeecCcCccccccccccc
Q 013850 320 PLGKELMEDCQKNIPGATIFQGYGMTETCAPISLE 354 (435)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~ 354 (435)
+....+...+...+...-...-|+.++..+...+.
T Consensus 338 p~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~ 372 (1032)
T KOG1178|consen 338 PLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYD 372 (1032)
T ss_pred ccchhhhhhhhhcccceeeeecccCCCCccceeHH
Confidence 99999998666665422333348999888777654
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.72 E-value=1.6e-16 Score=156.22 Aligned_cols=373 Identities=17% Similarity=0.188 Sum_probs=252.8
Q ss_pred chHHHHHhhcccCCCceeeeecCCC---cceeHHHHHHHHHHHHH-HHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHH
Q 013850 28 SMVHFLFRNSASYSSKLALIDADSD---ESLSFSQFKSIVIKVSH-SFRHLGITKKDVVLIFAPNS--IHFPICFLGVIA 101 (435)
Q Consensus 28 tl~~~l~~~~~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~-~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~ 101 (435)
.+...++..-..++...|.+.-+.. ..+||..+..++.++|+ .|-+-|+.++|+|.++...+ .++++..++|..
T Consensus 95 d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l 174 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFL 174 (1363)
T ss_pred chHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccc
Confidence 3555665555677777787765433 68999999999999999 55567999999999999887 899999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhcCCCcEEeccCCcccccccccccccccchhhhhhhcCCC
Q 013850 102 IGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (435)
Q Consensus 102 ~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (435)
+|.+++|+.+..+.+++..+++....+++++.......+.....+.-. .....++...++-.... .
T Consensus 175 ~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~-------------~k~v~~w~t~~~k~~~~-~ 240 (1363)
T KOG3628|consen 175 LGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSL-------------AKAVAWWKTNDFKGNYT-K 240 (1363)
T ss_pred cceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccH-------------HHHHHhhhcccccceee-h
Confidence 999999999999999999999999999999988766555433311100 01111111111110000 0
Q ss_pred CCCCCCCCCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh-----------------cc-CCCcEEEecch
Q 013850 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL-----------------VG-ELDHVVLCVLP 243 (435)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-----------------~~-~~~d~~l~~~~ 243 (435)
+....+...-. .++|-||++++|.--|++.+|. +..+.+.+...... .. ...+.++....
T Consensus 241 ~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 318 (1363)
T KOG3628|consen 241 DKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLD 318 (1363)
T ss_pred hhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccC
Confidence 11112222233 8899999999999889999988 55554433221111 01 12267777778
Q ss_pred HHHHHHHHHHHHhhhhcCcEEEecCC---CCHHHHHHHHHhcCceEEEecHHHHHHHHhc-----------ccccCCCCc
Q 013850 244 MFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKN-----------SLVRKFDIS 309 (435)
Q Consensus 244 l~~~~g~~~~~~~~l~~G~~i~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~-----------~~~~~~~l~ 309 (435)
.....|++.+++.++..|.|.+.++. ..|..+.+++.++|++++..--..+.+.... .+....+++
T Consensus 319 ~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~s 398 (1363)
T KOG3628|consen 319 PSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLS 398 (1363)
T ss_pred cccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCcc
Confidence 88888999999999999999999976 5788999999999999987654333333221 111224688
Q ss_pred ceeEEEecCCCCcHHHHHHHHhhC----C--CCee---------------ecCcCcccccccccccCCCCC---------
Q 013850 310 SLKLVGSGAAPLGKELMEDCQKNI----P--GATI---------------FQGYGMTETCAPISLENPLVG--------- 359 (435)
Q Consensus 310 ~lr~i~~gG~~l~~~~~~~~~~~~----~--~~~~---------------~~~yG~tE~~~~~~~~~~~~~--------- 359 (435)
++|.+++.-..++.+..+....++ + ++++ ..+-+.+|.+......+....
T Consensus 399 slk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll 478 (1363)
T KOG3628|consen 399 SLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLL 478 (1363)
T ss_pred ceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceee
Confidence 999999999888877665544433 2 1111 111222444433332222110
Q ss_pred -------------------CcCCCCcccccCC-cEEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccc
Q 013850 360 -------------------VRRSGSAGTLVAG-VEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW 418 (435)
Q Consensus 360 -------------------~~~~~~~G~~~~~-~~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~ 418 (435)
......+|...+| +.+.|+++++.+.|.++++|||||.++++..+ ||.-+..|...|
T Consensus 479 ~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~--~~al~~~t~~~F 555 (1363)
T KOG3628|consen 479 SKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKL--FYALDKQTENTF 555 (1363)
T ss_pred eccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccc--eeeccccccceE
Confidence 0111235666655 55567888999999999999999999999999 998888877766
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.38 E-value=1.3e-11 Score=116.81 Aligned_cols=146 Identities=16% Similarity=0.079 Sum_probs=99.7
Q ss_pred EEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEec--chHHHHHHHHHHHHhhhhcCcE-EEecC-
Q 013850 194 AAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCV--LPMFHVFGLSVILYDQLQKGNC-VVSMG- 268 (435)
Q Consensus 194 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~--~~l~~~~g~~~~~~~~l~~G~~-i~~~~- 268 (435)
-..+..||||||.|-.+..+................... ..++++... .+. +.+ ..+..... +-..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly-------~~~~~~~~~~~~~~l 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLY-------QSVNNRWISLDFFDL 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHH-------HHHHhccceeeecCC
Confidence 345667999999999999999877554333322222111 111333222 111 211 11111111 12221
Q ss_pred CCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCeeecCcCccccc
Q 013850 269 KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQGYGMTETC 348 (435)
Q Consensus 269 ~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~ 348 (435)
..+.+.+++.|++++++++.++|+.+..|++.....+.+ ..+|.++++||.++++..+.+++.|+ +++++.||+|| +
T Consensus 173 ~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg-~~V~~~YG~tE-g 249 (430)
T TIGR02304 173 LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFK-NTVHQIYQATE-G 249 (430)
T ss_pred CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhC-CCeeEccCCch-h
Confidence 146889999999999999999999999999876554434 47899999999999999999999997 99999999999 5
Q ss_pred cc
Q 013850 349 AP 350 (435)
Q Consensus 349 ~~ 350 (435)
.+
T Consensus 250 ~l 251 (430)
T TIGR02304 250 FL 251 (430)
T ss_pred he
Confidence 43
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.93 E-value=1.1e-07 Score=88.15 Aligned_cols=202 Identities=19% Similarity=0.185 Sum_probs=124.0
Q ss_pred CCCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhc---cCCCcEEEecchHHH----HHHHHHHHHhhhhcC
Q 013850 189 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV---GELDHVVLCVLPMFH----VFGLSVILYDQLQKG 261 (435)
Q Consensus 189 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~---~~~~d~~l~~~~l~~----~~g~~~~~~~~l~~G 261 (435)
..++++..++.||||||.|--+.+.+..+..+...+....... ...+-.++...|... +.......+..+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 3456778899999999998777777766666554443333211 111223333222211 111112233344456
Q ss_pred cEEEec-CCCCHHHHHHHHH----hcCceEEEecHHHHHHHHhcccccCC--CCc-ceeEEEecC------CCCc-HHHH
Q 013850 262 NCVVSM-GKFDIEMALRAIE----KYRVTVWWVVPPIILALAKNSLVRKF--DIS-SLKLVGSGA------APLG-KELM 326 (435)
Q Consensus 262 ~~i~~~-~~~~~~~~~~~l~----~~~~t~~~~~P~~~~~l~~~~~~~~~--~l~-~lr~i~~gG------~~l~-~~~~ 326 (435)
....+. ..++...+++.+. +.++..+++.|.++..++......+. .|+ ..+.+-.|| +.++ .++.
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 664443 2467777777664 45688999999877776665444433 333 355666665 4565 6888
Q ss_pred HHHHhhCCC---CeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCccCCCCCceeEEEeCCC
Q 013850 327 EDCQKNIPG---ATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPN 400 (435)
Q Consensus 327 ~~~~~~~~~---~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gei~v~g~~ 400 (435)
+.+.+.|+- ..+++.||+||......-. .. + ..++|.- +.|.||++.++++.|++|-|-+-++.
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~-~~------~--~~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~ 312 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYEC-GH------G--HFHVPPW-VIIRDPETLEPLPPGETGLIQVIDLA 312 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeC-CC------C--cccCCCe-EEEECCCCCcCCCCCCeeEEEEEccc
Confidence 888888973 4899999999966543321 11 1 1133322 77779999999999999999888774
No 132
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=96.46 E-value=0.11 Score=51.56 Aligned_cols=31 Identities=23% Similarity=0.193 Sum_probs=26.3
Q ss_pred CCCCCEEEEEeCCCCCC-CccceeeccHHHHH
Q 013850 189 VKQTDAAALLYSSGTTG-VSKGVILTHKNFIA 219 (435)
Q Consensus 189 ~~~~~~~~i~~TSGtTG-~pK~v~~t~~~l~~ 219 (435)
..+..+.+...|||||| ++|.+..|+..+..
T Consensus 98 L~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 98 LCSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred cCCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 45677788999999997 59999999998766
No 133
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=96.32 E-value=0.074 Score=53.11 Aligned_cols=30 Identities=23% Similarity=0.240 Sum_probs=25.8
Q ss_pred CCCCCEEEEEeCCCCC-CCccceeeccHHHH
Q 013850 189 VKQTDAAALLYSSGTT-GVSKGVILTHKNFI 218 (435)
Q Consensus 189 ~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~ 218 (435)
..++.+.+...||||| |.+|.++.|.+.+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 5577888999999999 88999999996664
No 134
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=96.12 E-value=0.05 Score=51.45 Aligned_cols=87 Identities=15% Similarity=0.066 Sum_probs=71.4
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~v 130 (435)
.-+|+.|+...+..+|+.|...|..+||+|.++..-+ ..-+-..+|+.++|++++|+.+. .-+....++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 4689999999999999999999999999998887722 12266789999999999999884 34556678899999999
Q ss_pred EEccccHHHH
Q 013850 131 ITVPELWDKV 140 (435)
Q Consensus 131 i~~~~~~~~~ 140 (435)
.+.+...-.+
T Consensus 187 ~~tps~~l~l 196 (438)
T COG1541 187 AATPSYLLYL 196 (438)
T ss_pred EEChHHHHHH
Confidence 9998755433
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=95.97 E-value=0.29 Score=48.70 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=26.5
Q ss_pred CCCCCEEEEEeCCCCCC-CccceeeccHHHHHH
Q 013850 189 VKQTDAAALLYSSGTTG-VSKGVILTHKNFIAA 220 (435)
Q Consensus 189 ~~~~~~~~i~~TSGtTG-~pK~v~~t~~~l~~~ 220 (435)
..+..+.+...|||||| .+|.+..|.+.+-..
T Consensus 86 lt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~ 118 (606)
T PLN02247 86 ISAQPITELLTSSGTSGGQPKLMPSTAEELDRK 118 (606)
T ss_pred eCCCCcceeeccCCCCCCceeEeeccHHHHHHH
Confidence 44778889999999995 899999999876443
No 136
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=95.83 E-value=0.011 Score=58.48 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=26.4
Q ss_pred CCCCCCEEEEEeCCCCCCC-ccceeeccHHHHH
Q 013850 188 SVKQTDAAALLYSSGTTGV-SKGVILTHKNFIA 219 (435)
Q Consensus 188 ~~~~~~~~~i~~TSGtTG~-pK~v~~t~~~l~~ 219 (435)
-..++.+.+...||||||. +|-++.|.+.+..
T Consensus 76 vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 76 VLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp CTSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 4567778899999999999 9999999998766
No 137
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=92.36 E-value=1.3 Score=42.88 Aligned_cols=87 Identities=11% Similarity=0.110 Sum_probs=67.2
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~v 130 (435)
..+|..++......++..+...|+++||++......+. ......+++..+|+.+++++... .+.+...+++.++.++
T Consensus 93 v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 93 VGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred eccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 35688888877777888888889999999887665542 22334677889999999987664 4667788999999999
Q ss_pred EEccccHHHH
Q 013850 131 ITVPELWDKV 140 (435)
Q Consensus 131 i~~~~~~~~~ 140 (435)
+..+..+..+
T Consensus 172 ~~~Ps~l~~L 181 (422)
T TIGR02155 172 MVTPSYMLNL 181 (422)
T ss_pred EEcHHHHHHH
Confidence 9998776554
No 138
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=91.96 E-value=1.7 Score=42.37 Aligned_cols=82 Identities=16% Similarity=0.155 Sum_probs=63.1
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc--HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~v 130 (435)
..+|..++...+...++.+...|+.+||++.++.+-+.. ....++++..+|++++|... ......+++..++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 457999999998888888888899999999998876542 23456788899998887643 2334567889999999
Q ss_pred EEccccH
Q 013850 131 ITVPELW 137 (435)
Q Consensus 131 i~~~~~~ 137 (435)
+..+...
T Consensus 181 ~~~ps~l 187 (445)
T TIGR03335 181 VASVFKL 187 (445)
T ss_pred EECHHHH
Confidence 8876543
No 139
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=87.94 E-value=4.4 Score=40.12 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=73.0
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.++++...+| ..+|+..+...+..+...+ +++++|++...++-. ..+...+++++..|+.+++.
T Consensus 164 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 164 DPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL---GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh---CCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 4456666543323 4689998877666555443 788999998887754 33455678999999988775
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHHhhc
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVKDL 143 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 143 (435)
+..+.+.+...+++.++.+++..+..+..+...
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 272 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLLQH 272 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHHcC
Confidence 566788888999999999999988877766543
No 140
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=86.44 E-value=8.4 Score=38.58 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=70.9
Q ss_pred cCCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEec
Q 013850 39 SYSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTA 109 (435)
Q Consensus 39 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i 109 (435)
..++.+|++...+| ..+|++.+...+..... ..++.++|++...+|-. ..+...++..+..|++.+..
T Consensus 180 ~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~ 256 (539)
T PRK06334 180 KDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK---FFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFA 256 (539)
T ss_pred CCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEe
Confidence 35677787654433 46899888766544433 35778899988887742 33334467778889887765
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
......+.+...+++.++.++...+..+..+.
T Consensus 257 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 288 (539)
T PRK06334 257 YNPLYPKKIVEMIDEAKVTFLGSTPVFFDYIL 288 (539)
T ss_pred cCCCCHHHHHHHHHHhCCcEEEecHHHHHHHH
Confidence 54567888889999999999999988776654
No 141
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=85.77 E-value=11 Score=37.41 Aligned_cols=99 Identities=17% Similarity=0.176 Sum_probs=71.8
Q ss_pred CCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC-cHHHHHHHHHHcCcEEEecCCC
Q 013850 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPV 112 (435)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~i~~~ 112 (435)
++.++++...+| ..+|+..+...+..... ..+++++|++....+-.. ..+...++++..|++.+..+..
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~ 242 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF 242 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC
Confidence 355666544333 36799988876666655 448899999988877542 2233445588889988877664
Q ss_pred CCHHHHHHHHHhcCCeEEEEccccHHHHhhc
Q 013850 113 YTVSELSKQVKDSNPKLVITVPELWDKVKDL 143 (435)
Q Consensus 113 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 143 (435)
+.+.+...+++.++.++++.+..+..+...
T Consensus 243 -~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~ 272 (521)
T PRK06187 243 -DPENLLDLIETERVTFFFAVPTIWQMLLKA 272 (521)
T ss_pred -CHHHHHHHHHHhCCeEEEchHHHHHHHHcC
Confidence 888899999999999999998877766544
No 142
>PRK08315 AMP-binding domain protein; Validated
Probab=84.72 E-value=9.3 Score=38.37 Aligned_cols=97 Identities=13% Similarity=0.128 Sum_probs=69.2
Q ss_pred CCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CCcHHHHHHHHHHcCcEEEecCC
Q 013850 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~i~~ 111 (435)
++.++++...+| ..+|++.+...+..+... .+++++|++....+- ...++..+++.+..|+..+....
T Consensus 198 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~ 274 (559)
T PRK08315 198 PDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGE 274 (559)
T ss_pred CCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecC
Confidence 455555543323 467888887666655443 488999999887775 34455667888999988875556
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
..+...+...+++.++.+++..+..+..+
T Consensus 275 ~~~~~~~~~~l~~~~~t~~~~~P~~~~~~ 303 (559)
T PRK08315 275 GFDPLATLAAVEEERCTALYGVPTMFIAE 303 (559)
T ss_pred CCCHHHHHHHHHHcCCeEEecchHHHHHH
Confidence 66778888999999999999887765443
No 143
>PRK12583 acyl-CoA synthetase; Provisional
Probab=82.83 E-value=15 Score=36.75 Aligned_cols=85 Identities=20% Similarity=0.266 Sum_probs=63.2
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~v 130 (435)
..+|+..+...+..+... .+++++|++....+- ....+..+++++..|+.++......+...+...+++.++.++
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 468998887666655544 378899998877764 355667778889999988744455677788888999999999
Q ss_pred EEccccHHHH
Q 013850 131 ITVPELWDKV 140 (435)
Q Consensus 131 i~~~~~~~~~ 140 (435)
+..+..+..+
T Consensus 296 ~~~P~~~~~l 305 (558)
T PRK12583 296 YGVPTMFIAE 305 (558)
T ss_pred eccHHHHHHH
Confidence 9887765433
No 144
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=82.33 E-value=9.7 Score=33.18 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=43.3
Q ss_pred HhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCC
Q 013850 72 RHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNP 127 (435)
Q Consensus 72 ~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~ 127 (435)
...|+.++|++. .+|-.- .+...+++++..|++.+.+ +.++++++-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556889999999 888653 3445689999999998887 68899988888887765
No 145
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=81.28 E-value=14 Score=37.34 Aligned_cols=100 Identities=11% Similarity=0.002 Sum_probs=70.2
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.+|++...+| ..+|+..+........ ...+++++|++....+... .+...+++.+..|++.+...
T Consensus 203 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 203 DREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGK---YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 3456666543323 4678888765443333 3457889998776665442 23455778889999888777
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
...+.+.+...+++.++.+++..+..+..+..
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 311 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPTAIRMLMG 311 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 67788999999999999999999887776643
No 146
>PLN03051 acyl-activating enzyme; Provisional
Probab=80.46 E-value=15 Score=36.27 Aligned_cols=99 Identities=15% Similarity=0.021 Sum_probs=67.6
Q ss_pred CCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc-HHHHHHHHHHcCcEEEecCCC
Q 013850 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPV 112 (435)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~ 112 (435)
++.+|++.-.+| ..+|+..+...+.... ...++.++|++...+|-... .+..+++++..|++.+..+..
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGW---AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHHH---HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 456666543322 4678877655443322 34578899988776664421 234577888999998877654
Q ss_pred CCHHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 113 YTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 113 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
...+.+...+++.++.++...+..+..+..
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 566788899999999999998887766543
No 147
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=80.39 E-value=22 Score=33.75 Aligned_cols=101 Identities=16% Similarity=0.163 Sum_probs=73.5
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc-HHHHHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~ 111 (435)
.++.++++...+| ..+|++.+...+..+.. ..+++++|++....+.... .+..+++.+..|+..+..+.
T Consensus 118 ~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~ 194 (408)
T TIGR01733 118 GPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPE 194 (408)
T ss_pred CCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcCh
Confidence 3566677644333 46788888877776665 3467889999888776543 45567788888988877766
Q ss_pred CCC--HHHHHHHHHhcCCeEEEEccccHHHHhhc
Q 013850 112 VYT--VSELSKQVKDSNPKLVITVPELWDKVKDL 143 (435)
Q Consensus 112 ~~~--~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 143 (435)
... ...+..++++.++..++..+.....+...
T Consensus 195 ~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 195 DEERDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred hhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 554 67888999999999999999888776543
No 148
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=80.23 E-value=11 Score=36.29 Aligned_cols=84 Identities=14% Similarity=0.176 Sum_probs=63.0
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC-cHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi 131 (435)
..+|++.+...+..++..+ +++++|++....+-.. ..+..+++++..|+..+..++. +.+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 4789999888777666544 7899999888877532 2233567888999988877543 3778889999999999
Q ss_pred EccccHHHHhh
Q 013850 132 TVPELWDKVKD 142 (435)
Q Consensus 132 ~~~~~~~~~~~ 142 (435)
..+..+..+..
T Consensus 203 ~~P~~l~~l~~ 213 (436)
T TIGR01923 203 LVPTQLNRLLD 213 (436)
T ss_pred eHHHHHHHHHh
Confidence 98877765544
No 149
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=79.96 E-value=23 Score=35.01 Aligned_cols=86 Identities=16% Similarity=0.149 Sum_probs=66.7
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc-HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi 131 (435)
..+|+..+...+......+ +++++|++...++-... .+..+++++..|+..+.. +....+.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 5679998887776665543 67899999988886532 345678889999988866 456788889999999999999
Q ss_pred EccccHHHHhh
Q 013850 132 TVPELWDKVKD 142 (435)
Q Consensus 132 ~~~~~~~~~~~ 142 (435)
..+.....+..
T Consensus 255 ~~P~~~~~l~~ 265 (515)
T TIGR03098 255 AVPPLWAQLAQ 265 (515)
T ss_pred cChHHHHHHHh
Confidence 99988776654
No 150
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=79.56 E-value=21 Score=35.90 Aligned_cols=98 Identities=22% Similarity=0.227 Sum_probs=69.1
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC-CcHHHHHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS-IHFPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~-~~~~~~~lA~~~~G~~~v~i~~ 111 (435)
.++.+|++...+| ..+|+..+...+..... ..++.++|++...+|-. ...+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh---hcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 4566776543323 46788887655544333 35788999888877743 22334567888889887765 5
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
.+....+...+++.++.++...+..+..+.
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 275 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLI 275 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHH
Confidence 678888899999999999999988776554
No 151
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=77.16 E-value=13 Score=35.49 Aligned_cols=99 Identities=18% Similarity=0.274 Sum_probs=71.3
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEec
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTA 109 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i 109 (435)
.++.++++....| ..+|+..+...+..+. +.. .+++ |++...+|-+ ..++..+++.+..|+..+..
T Consensus 153 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 228 (417)
T PF00501_consen 153 SPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLP 228 (417)
T ss_dssp TTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEE
T ss_pred CccceeEeeccccccccccccccccccccccccccc--cccccccC--ceEEeecccccccccccccccccccccccccc
Confidence 5688888754333 5789999999988877 432 2333 6676666655 23336789999999999888
Q ss_pred CCCCC--HHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 110 NPVYT--VSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 110 ~~~~~--~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
+.... .+.+...+++.++..+++.+..+..+.+
T Consensus 229 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~ 263 (417)
T PF00501_consen 229 SPFDLFDPESLLELISRYKPTILFAVPSMLEALLQ 263 (417)
T ss_dssp SSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHH
T ss_pred ccccccccccchhcccccccccccccccccccccc
Confidence 76543 4667889999999999999888776643
No 152
>PRK08308 acyl-CoA synthetase; Validated
Probab=77.07 E-value=31 Score=33.04 Aligned_cols=100 Identities=10% Similarity=0.159 Sum_probs=70.5
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.++++...+| ..+|++.+...+..+... .++..+|++...+|-. ..++..+++.+..|+..+...
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 4556666543333 468999888766655554 3667889887777654 344556788899999887764
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHHhhc
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVKDL 143 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 143 (435)
. .+...+...+++.++.+++..+..+..+...
T Consensus 176 ~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~ 207 (414)
T PRK08308 176 N-KNPKFALNILRNTPQHILYAVPLMLHILGRL 207 (414)
T ss_pred C-CCHHHHHHHHHHhCCeEEEcCHHHHHHHHhc
Confidence 4 5677788889999999999888777665543
No 153
>PRK06188 acyl-CoA synthetase; Validated
Probab=77.05 E-value=30 Score=34.42 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=64.8
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 132 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~ 132 (435)
..+|+..+...+.... ...++..+|++...++-...+...+++.+..|++.+..+ ......+...+++.++.+++.
T Consensus 186 v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 4578888776555433 345788999998888877555566777888899888775 456788889999999999999
Q ss_pred ccccHHHHhh
Q 013850 133 VPELWDKVKD 142 (435)
Q Consensus 133 ~~~~~~~~~~ 142 (435)
.+..+..+..
T Consensus 262 ~P~~l~~l~~ 271 (524)
T PRK06188 262 VPTMIYALLD 271 (524)
T ss_pred hHHHHHHHHh
Confidence 8877665543
No 154
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=77.02 E-value=25 Score=34.02 Aligned_cols=119 Identities=16% Similarity=0.187 Sum_probs=80.9
Q ss_pred CCCCCCCCCchHHHHHhhc------------ccCCCceeeeecCC-------CcceeHHHHHHHHHHHHHHHHhCCCCCC
Q 013850 19 LVLPSDPSFSMVHFLFRNS------------ASYSSKLALIDADS-------DESLSFSQFKSIVIKVSHSFRHLGITKK 79 (435)
Q Consensus 19 ~~~~~~~~~tl~~~l~~~~------------~~~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~g~~~g 79 (435)
..+|+. ..+.+++.... ...||..+-+.-.. +..+|.-++...+..++..+ |+...
T Consensus 201 ~~~~Ga--~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~ 275 (596)
T KOG1177|consen 201 HPLPGA--FLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEK 275 (596)
T ss_pred CcCCCc--eehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcc
Confidence 334554 66777665433 23456655543332 26899999999999888755 66664
Q ss_pred CEEEEEcCC--CCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 80 DVVLIFAPN--SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 80 d~V~l~~~~--~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
+++.+-.|= +.-.++..+|++..|++.|.-.|.+.+...-..+.+.++..++..+..+--+.+
T Consensus 276 ~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln 340 (596)
T KOG1177|consen 276 HRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLN 340 (596)
T ss_pred eEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhc
Confidence 444333221 234567788888999998887888888888888899999999998876554443
No 155
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=76.15 E-value=24 Score=35.21 Aligned_cols=98 Identities=12% Similarity=0.029 Sum_probs=69.8
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.+|++...+| ..+|+..+...+...... .++.++|++...+|-. ..++..+++.+..|+..+..+
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLW---SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHh---hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 4567777644333 468898887766554443 3678899888777643 223456678899999888775
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
..+.+.+...+++.++.++...+.....+.
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll 294 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPTMVVDFL 294 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHHHHHHHH
Confidence 467788889999999999998887665543
No 156
>PRK08316 acyl-CoA synthetase; Validated
Probab=74.84 E-value=37 Score=33.57 Aligned_cols=85 Identities=9% Similarity=0.131 Sum_probs=62.1
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~v 130 (435)
..+|++.+...+. ......+++++|++...+|-.. .+...+++++..|++.++.. ....+.+...+++.++.++
T Consensus 189 v~~s~~~l~~~~~---~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 264 (523)
T PRK08316 189 AMLTHRALIAEYV---SCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSF 264 (523)
T ss_pred EEEecHHHHHHHH---HHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEE
Confidence 4688888765543 3344558899999988877532 23344667788999988874 3467888999999999999
Q ss_pred EEccccHHHHh
Q 013850 131 ITVPELWDKVK 141 (435)
Q Consensus 131 i~~~~~~~~~~ 141 (435)
++.+.....+.
T Consensus 265 ~~~P~~~~~l~ 275 (523)
T PRK08316 265 FAPPTVWISLL 275 (523)
T ss_pred EeCHHHHHHHH
Confidence 99887765554
No 157
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=74.52 E-value=28 Score=34.03 Aligned_cols=98 Identities=12% Similarity=0.133 Sum_probs=68.4
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC-cHHHHHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~i~~ 111 (435)
.++.++++...+| ..+|+..+...+..... ..+++++|++...+|-.. ..+..+++.+..|+..+..+
T Consensus 139 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 214 (483)
T PRK03640 139 DLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSAL---NLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE- 214 (483)
T ss_pred CCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHH---hcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-
Confidence 3456666533333 36788877655433332 358899999999887532 12334577778899887665
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
..+...+...+++.++.++...+.....+.
T Consensus 215 ~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 244 (483)
T PRK03640 215 KFDAEKINKLLQTGGVTIISVVSTMLQRLL 244 (483)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHHHHHHHH
Confidence 567889999999999999999988877665
No 158
>PRK07638 acyl-CoA synthetase; Validated
Probab=74.12 E-value=37 Score=33.29 Aligned_cols=87 Identities=13% Similarity=0.150 Sum_probs=63.9
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc-HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi 131 (435)
..+|.+.+...+...+. ..+++++|++....+-... ++...+..+..|++.+.. +..+...+...+++.++.++.
T Consensus 161 v~~s~~~~~~~~~~~~~---~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---DFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHHH---hcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 46788887666554443 4478899998877665422 345566778889988765 567788889999999999999
Q ss_pred EccccHHHHhhc
Q 013850 132 TVPELWDKVKDL 143 (435)
Q Consensus 132 ~~~~~~~~~~~~ 143 (435)
..+..+..+...
T Consensus 237 ~~P~~~~~l~~~ 248 (487)
T PRK07638 237 TVPTMLESLYKE 248 (487)
T ss_pred eCcHHHHHHHhC
Confidence 998887776544
No 159
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=73.90 E-value=40 Score=33.76 Aligned_cols=98 Identities=11% Similarity=0.213 Sum_probs=68.9
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.+|++...+| ..+|+..+...+.... ...+++++|++....+-.- .++..+++.+..|++++..
T Consensus 195 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~- 270 (547)
T PRK13295 195 GPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYA---ERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQ- 270 (547)
T ss_pred CCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHH---HHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeC-
Confidence 3466666543333 4678888776655543 3457889999888877652 2455577888999987765
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
+....+.+...+++.++.+++..+..+..+.
T Consensus 271 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 301 (547)
T PRK13295 271 DIWDPARAAELIRTEGVTFTMASTPFLTDLT 301 (547)
T ss_pred CCCCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 4567888889999999999988777665544
No 160
>PRK06164 acyl-CoA synthetase; Validated
Probab=73.00 E-value=35 Score=34.06 Aligned_cols=100 Identities=16% Similarity=0.174 Sum_probs=72.6
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC-CcHHHHHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS-IHFPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~-~~~~~~~lA~~~~G~~~v~i~~ 111 (435)
.++.++++...+| ..+|+..+...+..++..+ ++.++|++...+|-+ ...+..+++.+..|+..+.. +
T Consensus 179 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 179 DPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 3566777653333 4678888877776666555 778999998888864 22334678888889887765 4
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHHhhc
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKVKDL 143 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 143 (435)
......+...+++.++.+++..+..+..+...
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~ 286 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDEMLRRILDT 286 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh
Confidence 56778888999999999999988877665443
No 161
>PRK11761 cysM cysteine synthase B; Provisional
Probab=72.17 E-value=35 Score=31.15 Aligned_cols=89 Identities=10% Similarity=0.012 Sum_probs=60.4
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
++.+-.+..+..=||++ |-+..+...+.+.| +.+|+.|.. ...+-.-..+.++|...|..+..+-|..........
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 55665554455667776 33444444444555 467776544 455666777788888999876666666655677888
Q ss_pred HHhcCCeEEEEcc
Q 013850 122 VKDSNPKLVITVP 134 (435)
Q Consensus 122 l~~~~~~~vi~~~ 134 (435)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 162
>PLN02565 cysteine synthase
Probab=70.60 E-value=38 Score=31.35 Aligned_cols=91 Identities=16% Similarity=0.013 Sum_probs=62.3
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
++.+-.+..+..-||++= -+..+-..+.+.|. .+|....+....+-.-+.+.++|..+|..++.+-|..........
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 455555443455566652 23333333444564 788665566666677777788899999977777777777778889
Q ss_pred HHhcCCeEEEEccc
Q 013850 122 VKDSNPKLVITVPE 135 (435)
Q Consensus 122 l~~~~~~~vi~~~~ 135 (435)
++..+++++++++.
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999999863
No 163
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=70.07 E-value=48 Score=32.75 Aligned_cols=99 Identities=17% Similarity=0.120 Sum_probs=69.0
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.++++...+| ..+|++.+...+.... ....+++++|++...++-.. .+...+++.+..|+.++..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 3566776544333 5678888876554322 23348899998887776543 23345667788899888777
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
...+...+...+++.++.+++..+..+..+
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~ 266 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYAAM 266 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHHHH
Confidence 666788888999999999999988765544
No 164
>PRK07529 AMP-binding domain protein; Validated
Probab=70.05 E-value=45 Score=34.24 Aligned_cols=100 Identities=16% Similarity=0.084 Sum_probs=68.1
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.+|++...+| ..+|++.+...+..++.. .++.++|++...+|-. ...+..+++.+..|+.++...
T Consensus 211 ~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~ 287 (632)
T PRK07529 211 GPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALL---LGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLAT 287 (632)
T ss_pred CcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHh---cCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecC
Confidence 4567776644333 467888887665555443 3678899888877743 234456788889999887765
Q ss_pred CCC--C---HHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 111 PVY--T---VSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 111 ~~~--~---~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
+.. + .+.+...+++.++.+++..+..+..+..
T Consensus 288 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 324 (632)
T PRK07529 288 PQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQ 324 (632)
T ss_pred ccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHh
Confidence 421 1 2456678899999999998877766644
No 165
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=69.45 E-value=48 Score=34.65 Aligned_cols=98 Identities=15% Similarity=0.088 Sum_probs=67.8
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CCcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.+|++.-.+| ..+|+..+...+..+... .++.++|++...+|- ...+...+++.+..|++.+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 4567777543333 578998887766655543 478899998888775 3444556788889999888665
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
.......+...+++.++..+...+.....+
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 469 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTFLGNY 469 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHHHHHh
Confidence 444556667778889999888776655433
No 166
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=67.89 E-value=44 Score=30.52 Aligned_cols=90 Identities=17% Similarity=0.090 Sum_probs=58.4
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
++.+-.+..+..-||+. |.+..+...+++.|. .+|+.| +....+-.-..+.++|.++|..+..+-|..........
T Consensus 23 ~i~~K~E~~~ptGS~K~--R~a~~~~~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~ 99 (299)
T TIGR01136 23 RVLAKLEGRNPSGSVKD--RIALSMIEDAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKL 99 (299)
T ss_pred eEEEEEcccCCCCCccH--HHHHHHHHHHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 45554444344556665 233333333444454 677765 45666667777788888999877666666655566678
Q ss_pred HHhcCCeEEEEccc
Q 013850 122 VKDSNPKLVITVPE 135 (435)
Q Consensus 122 l~~~~~~~vi~~~~ 135 (435)
++..++++++++..
T Consensus 100 ~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 100 LRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCEEEEeCCC
Confidence 89999999999764
No 167
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=67.46 E-value=50 Score=37.24 Aligned_cols=98 Identities=18% Similarity=0.168 Sum_probs=70.7
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHH-HHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI-CFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~-~~lA~~~~G~~~v~i~~ 111 (435)
.|+.+|++...+| ..+|.+.+......... ..++.++|++....+-+.+.-+ -+++.+..|++.+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQN---HYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 4667777644333 56888887765544443 4588999999998888765433 36777889998887665
Q ss_pred C--CCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 112 V--YTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 112 ~--~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
. .+...+...+++.++.++...+..+..+
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 3 4677888999999999998888766544
No 168
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=67.35 E-value=15 Score=29.04 Aligned_cols=41 Identities=12% Similarity=0.055 Sum_probs=33.4
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC---CCcHHHHHHHHHHcCcE
Q 013850 65 IKVSHSFRHLGITKKDVVLIFAPN---SIHFPICFLGVIAIGAI 105 (435)
Q Consensus 65 ~~la~~L~~~g~~~gd~V~l~~~~---~~~~~~~~lA~~~~G~~ 105 (435)
+.++..|.+.|+.+++.|++++.. +.....+++++-.+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 477888889999999999999975 56666777888888864
No 169
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=67.06 E-value=52 Score=36.47 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=72.2
Q ss_pred cCCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEec
Q 013850 39 SYSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTA 109 (435)
Q Consensus 39 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i 109 (435)
..++.+|++...+| ..+|++.+...+..+.. ..++.++|++...+|-. ..+....++.+..|+..+..
T Consensus 779 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~ 855 (1146)
T PRK08633 779 FKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYH 855 (1146)
T ss_pred CCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEe
Confidence 34677777644333 46888888777665544 34678899887776642 33344467778889888876
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
+...+.+.+...+++.++.++...+.....+..
T Consensus 856 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 856 PDPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 666778889999999999999999887765543
No 170
>PLN02246 4-coumarate--CoA ligase
Probab=66.37 E-value=51 Score=32.89 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=69.1
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHH-HhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEec
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSF-RHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTA 109 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L-~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i 109 (435)
.|+.++++...+| ..+|++.+........... ...++.++|++...+|-. ..+...+++.+..|++++..
T Consensus 177 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 256 (537)
T PLN02246 177 SPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIM 256 (537)
T ss_pred CccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEe
Confidence 4567777543322 4678888876554443322 235788999998877743 22234467788899998887
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
+. .....+...+++.++.++...+.....+.
T Consensus 257 ~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 287 (537)
T PLN02246 257 PK-FEIGALLELIQRHKVTIAPFVPPIVLAIA 287 (537)
T ss_pred CC-CCHHHHHHHHHHhCceEEEcchHHHHHHh
Confidence 54 57788889999999999988877665553
No 171
>PRK07787 acyl-CoA synthetase; Validated
Probab=66.17 E-value=76 Score=31.00 Aligned_cols=97 Identities=20% Similarity=0.198 Sum_probs=68.5
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CCcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.++++...+| ..+|+..+...+..++.. .++.++|++...+|- ...++..+++.+..|+..+...
T Consensus 126 ~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 126 DPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 4566666543333 467999888776666544 467889987766653 2345666888999999988764
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
......+...++ .++..+...+..+..+.
T Consensus 203 -~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 203 -RPTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred -CCCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 456788888888 89999888887666554
No 172
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=66.12 E-value=66 Score=32.12 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=68.6
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcH--H-HHHHHHHHcCcEEEec
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF--P-ICFLGVIAIGAIASTA 109 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~--~-~~~lA~~~~G~~~v~i 109 (435)
.++.+|++...+| ..+|...+...+..... ..++.++|++...+|-.-.+ . ...++++..|+..+..
T Consensus 180 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 180 PADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 3466666533323 56899998887766544 34788999998887754322 2 2468888999988765
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
+..+...+...+++.++.++...+..+..+.
T Consensus 257 -~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~ 287 (536)
T PRK10946 257 -PDPSATLCFPLIEKHQVNVTALVPPAVSLWL 287 (536)
T ss_pred -CCCCHHHHHHHHHHhCCcEEEeChHHHHHHH
Confidence 4446667778899999999999887766553
No 173
>PLN02736 long-chain acyl-CoA synthetase
Probab=65.93 E-value=1.3e+02 Score=30.92 Aligned_cols=102 Identities=13% Similarity=0.012 Sum_probs=70.8
Q ss_pred eeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEE
Q 013850 210 VILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (435)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~ 287 (435)
..+|.+.+...+..++..+.-.+ ..+|++...++-..-.. ..++.++..|+..+.. +.+.++.+...+++.++.++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l 154 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL--IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAI 154 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEE
Confidence 45799999888877766544332 23377777666554333 3567888889988866 56789999999999999999
Q ss_pred EecHHHHHHHHhcccccCCCCcceeEEEec
Q 013850 288 WVVPPIILALAKNSLVRKFDISSLKLVGSG 317 (435)
Q Consensus 288 ~~~P~~~~~l~~~~~~~~~~l~~lr~i~~g 317 (435)
++.+..+..+..... .++.++.++..
T Consensus 155 ~~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 155 FCVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred EECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 999887766654321 23456665543
No 174
>PRK07470 acyl-CoA synthetase; Validated
Probab=65.42 E-value=63 Score=32.11 Aligned_cols=102 Identities=20% Similarity=0.171 Sum_probs=65.1
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecC-C
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN-P 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~-~ 111 (435)
.++.++++...+| ..+|+..+...+......+. .++.++|++..++|-+..+-...+..+..|+..+.+. .
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 3456666644333 46788887654433222221 2667889898888866443333334455566554443 4
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
..+.+.+...+++.++.+++..+..+..+..
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 5678889999999999999999888776643
No 175
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=65.14 E-value=74 Score=28.31 Aligned_cols=79 Identities=10% Similarity=0.154 Sum_probs=50.5
Q ss_pred eHHHHHH-HHHHHHHHHHhCC-CCCCCEEEEEcCCCCcHHHHHHHHHHc------C--cEEEecCCC---CCHHHHHHHH
Q 013850 56 SFSQFKS-IVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAI------G--AIASTANPV---YTVSELSKQV 122 (435)
Q Consensus 56 Ty~el~~-~~~~la~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~------G--~~~v~i~~~---~~~~~~~~~l 122 (435)
++..+.+ ..+++.+.+.+.+ +.+|++|+|.+.=+.+.++.+..+... + ..++-++.. ++.+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3444444 3355666677654 478999999999999998876666442 2 344445543 2344556777
Q ss_pred HhcCCeEEEEcc
Q 013850 123 KDSNPKLVITVP 134 (435)
Q Consensus 123 ~~~~~~~vi~~~ 134 (435)
+..+..+.+.+.
T Consensus 84 ~~lgI~~~v~~~ 95 (258)
T PRK10696 84 ESLGVPYHIEEQ 95 (258)
T ss_pred HHhCCCEEEEEe
Confidence 788877777653
No 176
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=65.10 E-value=32 Score=32.68 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=38.7
Q ss_pred HHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 013850 69 HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 69 ~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~~~~~l~~~~~~~vi~~ 133 (435)
..++..++++||.|++-. +.+.....++...|+.++.++.+ .+.+.++..++. +.++|+..
T Consensus 61 ~~l~al~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 61 MAALLLDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHHcCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 334455789999887643 34455566777889877776543 345667666653 56776643
No 177
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=64.64 E-value=70 Score=32.50 Aligned_cols=97 Identities=16% Similarity=0.138 Sum_probs=67.4
Q ss_pred CCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecCC
Q 013850 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~~ 111 (435)
++.++++...+| ..+|+..+...+..+... .++.++|++...+|-.. .++..+++.+..|++.+. .+
T Consensus 198 ~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~ 273 (600)
T PRK08279 198 AKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RR 273 (600)
T ss_pred ccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cC
Confidence 455666543333 468999988777766554 47889999988887653 334455666777777665 45
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
.++...+...+++.++.++...+.....+.
T Consensus 274 ~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~ 303 (600)
T PRK08279 274 KFSASRFWDDVRRYRATAFQYIGELCRYLL 303 (600)
T ss_pred CCCHHHHHHHHHHhcceEEeehHHHHHHHH
Confidence 677778888889999999988776665544
No 178
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=64.29 E-value=85 Score=31.42 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=75.6
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.+|++.-.+| ..+|++.+...+..+...+.. ++.+.|++...+|-. .-+...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~-~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGG-GLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcc-cCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 4677787644333 578999999887777776642 178888877777753 566667788888999888777
Q ss_pred C-CCCHHHHHHHHHhcCCeEEEEccccHHHHhhc
Q 013850 111 P-VYTVSELSKQVKDSNPKLVITVPELWDKVKDL 143 (435)
Q Consensus 111 ~-~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 143 (435)
+ .+..+.+...+.+.++..+...+.....+...
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~ 281 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDN 281 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHHHHhC
Confidence 5 67888888888888888888777776665443
No 179
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=64.28 E-value=48 Score=31.37 Aligned_cols=62 Identities=21% Similarity=0.100 Sum_probs=47.2
Q ss_pred hCC-CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc
Q 013850 73 HLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 73 ~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (435)
+.| +.+|....+....+-.-+.+.++|...|.-+..+-|.....+....++..+++++++++
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 345 57785555556667777778888899998777666766666778899999999999974
No 180
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=64.17 E-value=74 Score=31.64 Aligned_cols=99 Identities=14% Similarity=0.102 Sum_probs=68.3
Q ss_pred cCCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHH-HHHHHHHcCcEEEe
Q 013850 39 SYSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPI-CFLGVIAIGAIAST 108 (435)
Q Consensus 39 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~-~~lA~~~~G~~~v~ 108 (435)
..++.+|++-..+| ..+|+..+...+..... ..++.++|++...+|... .+.. ..++++..|++.+.
T Consensus 180 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~ 256 (527)
T TIGR02275 180 TKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVL 256 (527)
T ss_pred CCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEE
Confidence 34566777643333 56788888766555443 457889999888877542 2222 36778888988776
Q ss_pred cCCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 109 ANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 109 i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
. +......+...+++.++.++...+..+..+.
T Consensus 257 ~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 288 (527)
T TIGR02275 257 A-PDPSPTDCFPLIERHKVTVTALVPPAVALWM 288 (527)
T ss_pred C-CCCCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 4 4456677788899999999999988776554
No 181
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=64.10 E-value=73 Score=32.14 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=67.0
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc-HHHHHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~ 111 (435)
.|+.++++...+| ..+|+..+...+..+. .....++.++|++...+|-.-. .+...++.+..|...+...+
T Consensus 179 ~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 179 DETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred CccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 4466666543323 4678888754443322 1223578899998888775422 12345777788888776666
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
..+.+.+...+++.++.+++..+..+..+
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPTLWIQL 286 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCHHHHHH
Confidence 67888899999999999999887766544
No 182
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=63.69 E-value=22 Score=33.51 Aligned_cols=65 Identities=20% Similarity=0.278 Sum_probs=44.0
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 013850 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 65 ~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~~~~~l~~~~~~~vi~~ 133 (435)
..+-..|..+|+++||.|++- .+-+....-|+..+|+.++.++-+ .+.+.++..++.-. ++|+..
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 344555677899999988876 445677788999999988887654 35677887776443 666654
No 183
>PLN03052 acetate--CoA ligase; Provisional
Probab=63.44 E-value=90 Score=32.76 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=71.3
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~- 267 (435)
.++.+|++.-..+..+.+ ...+|.+.+...+..++..+.-.+ .++|++...+|..--+-. .++.++..|+..+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~vi--a~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVI--IYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHH--HHHHHHHcCCEEEeeC
Confidence 467787765443322222 345899999888888776554432 334899888887654433 678888899988877
Q ss_pred CCCCHHHHHHHHHhcCceEEEecHH
Q 013850 268 GKFDIEMALRAIEKYRVTVWWVVPP 292 (435)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P~ 292 (435)
+.+.++.+...+++.++.++++...
T Consensus 265 p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 265 DSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCc
Confidence 5688999999999999999887653
No 184
>PLN03013 cysteine synthase
Probab=63.13 E-value=81 Score=30.48 Aligned_cols=81 Identities=17% Similarity=0.051 Sum_probs=55.3
Q ss_pred cceeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi 131 (435)
..-|+++ +-+..+-..+.+.| +++|....+....+-.-+.+.++|...|..++.+-|.....+....++..++++++
T Consensus 149 PtGSfKd--R~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 149 PCCSVKD--RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred CccccHH--HHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 4456665 22333333334455 47886556666667777777888888998666666666667778889999999999
Q ss_pred Eccc
Q 013850 132 TVPE 135 (435)
Q Consensus 132 ~~~~ 135 (435)
+++.
T Consensus 227 v~~~ 230 (429)
T PLN03013 227 TDPA 230 (429)
T ss_pred ECCC
Confidence 9754
No 185
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=63.07 E-value=42 Score=31.72 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=52.7
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCCeEEEEcc-----
Q 013850 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITVP----- 134 (435)
Q Consensus 65 ~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~~~~~l~~~~~~~vi~~~----- 134 (435)
..+.-.|+.+++++||-|.+ .+.-|+...=++...|+.+|-++-+ .+++.++..+... .+.|+.-.
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~~ 135 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQP 135 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccCC
Confidence 34445567778999995443 3567888999999999998887643 4678888888765 67776542
Q ss_pred ccHHHHhhcC
Q 013850 135 ELWDKVKDLN 144 (435)
Q Consensus 135 ~~~~~~~~~~ 144 (435)
..++.+.++.
T Consensus 136 ~dm~~i~~la 145 (374)
T COG0399 136 CDMDAIMALA 145 (374)
T ss_pred CCHHHHHHHH
Confidence 3445554443
No 186
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=62.88 E-value=69 Score=29.21 Aligned_cols=90 Identities=14% Similarity=0.034 Sum_probs=57.0
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
++.+-.+..+..-|+++= .+..+.....+.| +.+|+.| +....+-.-..+.+++.++|..+..+-|..........
T Consensus 22 ~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~ 98 (298)
T TIGR01139 22 NVFVKLEGRNPSGSVKDR--IALNMIWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKL 98 (298)
T ss_pred eEEEEEcccCCCCcchHH--HHHHHHHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHH
Confidence 455555443444555542 2222223333445 3677766 55556667777788888899876666666554556778
Q ss_pred HHhcCCeEEEEccc
Q 013850 122 VKDSNPKLVITVPE 135 (435)
Q Consensus 122 l~~~~~~~vi~~~~ 135 (435)
++..++++++++..
T Consensus 99 ~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 99 LKAYGAELVLTPGA 112 (298)
T ss_pred HHHcCCEEEEECCC
Confidence 89999999999865
No 187
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=62.77 E-value=56 Score=33.21 Aligned_cols=102 Identities=23% Similarity=0.279 Sum_probs=72.0
Q ss_pred cccCCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEE
Q 013850 37 SASYSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIAS 107 (435)
Q Consensus 37 ~~~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v 107 (435)
.+..|+.+|.+.-.+| .-+||..+...+..+...+. -++++|++..++|-. .|-... .++...|.+.+
T Consensus 186 ~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~-~~~~~~~g~~~ 262 (613)
T COG1022 186 APPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFE-GGLALYGGVTV 262 (613)
T ss_pred CCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHH-HHHHhhcceEE
Confidence 3567888887644333 67999999999999888775 378999999999965 232222 33333333333
Q ss_pred ecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhhc
Q 013850 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL 143 (435)
Q Consensus 108 ~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 143 (435)
. ...+...+..-++..+|.+++.-+...+.+...
T Consensus 263 ~--~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~ 296 (613)
T COG1022 263 L--FKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKG 296 (613)
T ss_pred E--ecCCHHHHHHHHHHhCCeEEeechHHHHHHHHH
Confidence 2 344677888999999999999988877766544
No 188
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=62.68 E-value=93 Score=30.57 Aligned_cols=98 Identities=13% Similarity=0.082 Sum_probs=68.6
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC-cHHHHHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~i~~ 111 (435)
.++..+++...+| ..+|++.+......+.. ..++..+|++....|... ..+..+++++..|++.+..++
T Consensus 139 ~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 215 (502)
T TIGR01734 139 KGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDK 215 (502)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCH
Confidence 4555666544333 57889888766654443 357888898887776653 334567788999999988765
Q ss_pred C--CCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 112 V--YTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 112 ~--~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
. .....+...+++.++..+...+...+.+
T Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~ 246 (502)
T TIGR01734 216 DITNNFKLLFEELPKTGLNVWVSTPSFVDMC 246 (502)
T ss_pred HHhcCHHHHHHHHHHcCCeEEEEChhHHHHH
Confidence 4 3566778888999999999888776544
No 189
>PRK05852 acyl-CoA synthetase; Validated
Probab=62.65 E-value=1.2e+02 Score=30.21 Aligned_cols=87 Identities=13% Similarity=0.211 Sum_probs=62.7
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEe-cCCCCCHHHHHHHHHhcCCeE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIAST-ANPVYTVSELSKQVKDSNPKL 129 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~-i~~~~~~~~~~~~l~~~~~~~ 129 (435)
..+|+..+...+..+...+ +++++|++....|-. ..++..+++++..|.+.+. -....+...+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4578888877666665544 688999888877754 3455567778888776543 233556778888899999999
Q ss_pred EEEccccHHHHhh
Q 013850 130 VITVPELWDKVKD 142 (435)
Q Consensus 130 vi~~~~~~~~~~~ 142 (435)
++..+.....+..
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9998887766643
No 190
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=62.27 E-value=75 Score=29.32 Aligned_cols=91 Identities=14% Similarity=0.054 Sum_probs=58.1
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.+..+..-|+++-. ....+.... +.|..+++.|.... .+-.-..+.++|...|..++.+-|..........
T Consensus 16 ~~i~~K~E~~nptGS~K~R~-a~~~l~~a~-~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 92 (316)
T cd06448 16 CNVFLKLENLQPSGSFKIRG-IGHLCQKSA-KQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEK 92 (316)
T ss_pred CeEEEEeccCCCcCChHHHH-HHHHHHHHH-HhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 35666555444556666521 222333333 33444566655544 4666677788888999877766666666677888
Q ss_pred HHhcCCeEEEEccc
Q 013850 122 VKDSNPKLVITVPE 135 (435)
Q Consensus 122 l~~~~~~~vi~~~~ 135 (435)
++..++++++++..
T Consensus 93 l~~~GA~v~~~~~~ 106 (316)
T cd06448 93 LRDEGATVVVHGKV 106 (316)
T ss_pred HHHcCCEEEEECCc
Confidence 99999999999765
No 191
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=62.03 E-value=92 Score=28.08 Aligned_cols=67 Identities=9% Similarity=-0.032 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCC----CHHHHHHHHHhcCCeEEEEcc
Q 013850 62 SIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY----TVSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 62 ~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~----~~~~~~~~l~~~~~~~vi~~~ 134 (435)
-|...+|+.|++. |-.|.+++......+.. .+...|..+..++-.. ..+++..+++..+|+++|+|.
T Consensus 18 ~Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~ 88 (279)
T TIGR03590 18 MRCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDH 88 (279)
T ss_pred HHHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcC
Confidence 3567788988764 44677777766554433 3457788777665432 355788899999999999996
No 192
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=61.68 E-value=43 Score=31.72 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=38.3
Q ss_pred HHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 013850 71 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 71 L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~~~~~l~~~~~~~vi~~ 133 (435)
+...++++||.|++-.+ .+.....++...|+.++.++.+ .+.+.++..++. ++++|+..
T Consensus 63 l~~~~~~~Gd~Viv~~~---t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 63 ALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHHhCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 34457889998877544 3445566777889877776532 456777776654 56777644
No 193
>PRK13388 acyl-CoA synthetase; Provisional
Probab=61.65 E-value=1.2e+02 Score=30.27 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=64.6
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.+|++...+| ..+|+..+...+..+.. ..+++++|++...+|-. ..++..+++.+..|++.+. .
T Consensus 148 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~-~ 223 (540)
T PRK13388 148 DAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTE---RFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL-P 223 (540)
T ss_pred CCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHH---HhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE-C
Confidence 4467777644333 46788888765555544 34789999988877653 2233344556778887664 4
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
+..+...+...+++.++.++...+.....+
T Consensus 224 ~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l 253 (540)
T PRK13388 224 AKFSASGFLDDVRRYGATYFNYVGKPLAYI 253 (540)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehHHHHHHH
Confidence 556778888899999999987665554443
No 194
>PRK05850 acyl-CoA synthetase; Validated
Probab=61.52 E-value=1.1e+02 Score=30.79 Aligned_cols=105 Identities=16% Similarity=0.148 Sum_probs=72.1
Q ss_pred CCCCEEEEEeC-CCC-CCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec
Q 013850 190 KQTDAAALLYS-SGT-TGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (435)
Q Consensus 190 ~~~~~~~i~~T-SGt-TG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~ 267 (435)
.|+.++++... ++. .|. ...+|+..+...+..++..+.-....+|++...++-+.- +...++.++..|+..+..
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~~--~~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGLE--YIVAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCccc--HHHHHHHHHHcCceEEec
Confidence 46667665432 111 121 346899999888777766555434445888887776543 334688889999999888
Q ss_pred CC----CCHHHHHHHHHhcCceEEEecHHHHHHHH
Q 013850 268 GK----FDIEMALRAIEKYRVTVWWVVPPIILALA 298 (435)
Q Consensus 268 ~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 298 (435)
+. .....+...+++.++.++...+.....+.
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHH
Confidence 53 35678999999999999999887666553
No 195
>PLN02614 long-chain acyl-CoA synthetase
Probab=60.99 E-value=59 Score=33.67 Aligned_cols=99 Identities=21% Similarity=0.211 Sum_probs=68.8
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHh--CCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEe
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRH--LGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIAST 108 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~--~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~ 108 (435)
.|+.+|++.-.+| ..+|++.+...+..+...+.. .++.++|++..++|-. .+.. ..+.++..|+..+.
T Consensus 221 ~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~ 299 (666)
T PLN02614 221 KKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGF 299 (666)
T ss_pred CCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEE
Confidence 3567777543322 578999988776665554421 3678899988888854 3443 34556778888766
Q ss_pred cCCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 109 ANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 109 i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
.. .+.+.+...++..+|.+++..+..+..+.
T Consensus 300 ~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~ 330 (666)
T PLN02614 300 WR--GDVKLLIEDLGELKPTIFCAVPRVLDRVY 330 (666)
T ss_pred eC--CCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 53 36778888999999999999988776554
No 196
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=60.28 E-value=83 Score=32.43 Aligned_cols=98 Identities=9% Similarity=-0.018 Sum_probs=63.6
Q ss_pred CCceeeeecCCC-------cceeHHHHHH-HHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCC-
Q 013850 41 SSKLALIDADSD-------ESLSFSQFKS-IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP- 111 (435)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~-~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~- 111 (435)
++.++++.-.+| ..+|++.+.. .....+ ...++.++|++....+.+..+...+++.+..|++.+..+.
T Consensus 262 ~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~ 338 (655)
T PRK03584 262 FDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELG---LHCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGS 338 (655)
T ss_pred CCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHH---HhcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCC
Confidence 355666533322 3567765432 222222 2347889998877666554444456788999998887653
Q ss_pred --CCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 112 --VYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 112 --~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
..+...+..++++.++.++.+.+.....+.
T Consensus 339 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 370 (655)
T PRK03584 339 PFYPDPNVLWDLAAEEGVTVFGTSAKYLDACE 370 (655)
T ss_pred CCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHH
Confidence 235778888999999999998887766554
No 197
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=60.07 E-value=94 Score=34.55 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=69.4
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.++++...+| ..+|++.+...+....+.+ ++.++|++...+|-. ..+...++..+..|...+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI---DFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh---CCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 5667777644333 4679998877766665543 678999988887753 233345667778898887766
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
.....+.+...+++.++.++...+.....+.
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 898 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGYA 898 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHHH
Confidence 5555566778889999999998887766554
No 198
>PRK07788 acyl-CoA synthetase; Validated
Probab=59.89 E-value=53 Score=32.86 Aligned_cols=86 Identities=9% Similarity=0.101 Sum_probs=60.0
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcH-HHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi 131 (435)
..+|+..+...+..+ ....++.++|++....|-.-.+ +..+++++..|++.+.. ...+.+.+...+++.++..+.
T Consensus 225 v~~s~~~~~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~ 300 (549)
T PRK07788 225 APRPEPSPLAPLAGL---LSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALV 300 (549)
T ss_pred EeccCccHHHHHHHH---HhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEE
Confidence 456777665544433 3455788999888777653221 23356677889887765 566788888999999999999
Q ss_pred EccccHHHHhh
Q 013850 132 TVPELWDKVKD 142 (435)
Q Consensus 132 ~~~~~~~~~~~ 142 (435)
..+..+..+..
T Consensus 301 ~~P~~~~~l~~ 311 (549)
T PRK07788 301 VVPVMLSRILD 311 (549)
T ss_pred EHHHHHHHHHh
Confidence 99887766543
No 199
>PRK06839 acyl-CoA synthetase; Validated
Probab=59.18 E-value=1.5e+02 Score=29.07 Aligned_cols=99 Identities=11% Similarity=0.117 Sum_probs=66.5
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc--HHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.++++...+| ..+|++.+...+... ....++.++|++...+|-.-. +....++++..|+..+. .
T Consensus 147 ~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~-~ 222 (496)
T PRK06839 147 NESASFIICYTSGTTGKPKGAVLTQENMFWNALNN---TFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIV-P 222 (496)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHH---HHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEE-c
Confidence 4456666543333 467888875443332 334578899998887775422 22344677888887654 4
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
.....+++...+++.++.++...+.....+..
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 254 (496)
T PRK06839 223 RKFEPTKALSMIEKHKVTVVMGVPTIHQALIN 254 (496)
T ss_pred cCCCHHHHHHHHHhhCCeEEEehHHHHHHHHh
Confidence 56678888899999999999998887776654
No 200
>PLN02550 threonine dehydratase
Probab=59.04 E-value=1.2e+02 Score=30.64 Aligned_cols=92 Identities=18% Similarity=0.137 Sum_probs=55.1
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.++....-||++ .-..+++.+ |.+....+| .+....+-....+.++|.++|+.+..+-|...+......
T Consensus 124 ~~IylK~E~lqptGSFK~-RGA~n~I~~-L~~e~~~~G---VV~aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~ 198 (591)
T PLN02550 124 VKVLLKREDLQPVFSFKL-RGAYNMMAK-LPKEQLDKG---VICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQS 198 (591)
T ss_pred CEEEEEEcCCCCCCcHHH-HHHHHHHHH-HHHhcCCCC---EEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 345544444334446666 222233333 222234555 344555666777788999999866665565555555677
Q ss_pred HHhcCCeEEEEccccHH
Q 013850 122 VKDSNPKLVITVPELWD 138 (435)
Q Consensus 122 l~~~~~~~vi~~~~~~~ 138 (435)
++..+++++++...+.+
T Consensus 199 ~r~~GAeVvl~g~~~de 215 (591)
T PLN02550 199 VERLGATVVLVGDSYDE 215 (591)
T ss_pred HHHcCCEEEEeCCCHHH
Confidence 79999999999875433
No 201
>PRK09274 peptide synthase; Provisional
Probab=58.61 E-value=93 Score=31.13 Aligned_cols=100 Identities=12% Similarity=0.077 Sum_probs=66.6
Q ss_pred CCCCEEEEEeCCCCC-CCccceeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec
Q 013850 190 KQTDAAALLYSSGTT-GVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~ 267 (435)
.|+.++++....++. ...+...+|.+.+...+..++..+.-.+. .+|++...++-+.-+- ..++.++..|+..+..
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~--~~~la~~~~G~~~v~l 96 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFF--ALTFALFKAGAVPVLV 96 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHH--HHHHHHHHcCeEEEEc
Confidence 355666655333221 22333468999998887777665543322 3388888777654433 3678889999998877
Q ss_pred C-CCCHHHHHHHHHhcCceEEEecH
Q 013850 268 G-KFDIEMALRAIEKYRVTVWWVVP 291 (435)
Q Consensus 268 ~-~~~~~~~~~~l~~~~~t~~~~~P 291 (435)
+ ......+...+++.++..+...+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 4 56788888899999998887754
No 202
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=58.12 E-value=74 Score=36.26 Aligned_cols=99 Identities=8% Similarity=0.031 Sum_probs=68.6
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc-HHHHHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~ 111 (435)
.|+.+|++...+| ..+|++.+...+..++. ..++.++|++...++-+.+ .+..++.++..|++.+..+.
T Consensus 413 ~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~ 489 (1389)
T TIGR03443 413 GPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAK---RFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTA 489 (1389)
T ss_pred CCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcCh
Confidence 3566777644333 56888888776555444 3478899998888765533 33457788899998776543
Q ss_pred CC--CHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 112 VY--TVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 112 ~~--~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
.. ....+...+++.++.++...+.....+.
T Consensus 490 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~ 521 (1389)
T TIGR03443 490 DDIGTPGRLAEWMAKYGATVTHLTPAMGQLLS 521 (1389)
T ss_pred hhccCHHHHHHHHHHhCCeEEEeCHHHHHHHH
Confidence 32 4567888999999999998887666553
No 203
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=58.05 E-value=37 Score=26.85 Aligned_cols=87 Identities=14% Similarity=0.127 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEEEecHH------HHHHHHhcccccCCCCcceeEEE
Q 013850 243 PMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPP------IILALAKNSLVRKFDISSLKLVG 315 (435)
Q Consensus 243 ~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~------~~~~l~~~~~~~~~~l~~lr~i~ 315 (435)
.=.|..|........-..|..++... ...++.+.+.+.++++.++..+-. .+..+.+.... ..++.++ ++
T Consensus 13 gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~--~~~~~~~-i~ 89 (137)
T PRK02261 13 ADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIE--AGLGDIL-LY 89 (137)
T ss_pred CChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHh--cCCCCCe-EE
Confidence 34577777655555556788887775 457899999999999988766532 23333333222 2244554 55
Q ss_pred ecCCC-Cc----HHHHHHHHhh
Q 013850 316 SGAAP-LG----KELMEDCQKN 332 (435)
Q Consensus 316 ~gG~~-l~----~~~~~~~~~~ 332 (435)
+||.. .+ .+..+++++.
T Consensus 90 vGG~~~~~~~~~~~~~~~l~~~ 111 (137)
T PRK02261 90 VGGNLVVGKHDFEEVEKKFKEM 111 (137)
T ss_pred EECCCCCCccChHHHHHHHHHc
Confidence 55543 23 4455566554
No 204
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=57.71 E-value=1.6e+02 Score=28.08 Aligned_cols=83 Identities=16% Similarity=0.234 Sum_probs=51.9
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCC--CCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCe
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGIT--KKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPK 128 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~--~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~ 128 (435)
..+|++.+...+..+++.+ ++. +.|++..++|-.- .+...++..+..|+.++... ..+...+...++.. .
T Consensus 113 V~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t 186 (386)
T TIGR02372 113 VTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--D 186 (386)
T ss_pred eEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CCChHHHHHhhccC--C
Confidence 5789999988888777765 443 3457777777542 23344566677899887665 45554444444322 5
Q ss_pred EEEEccccHHHHh
Q 013850 129 LVITVPELWDKVK 141 (435)
Q Consensus 129 ~vi~~~~~~~~~~ 141 (435)
+++..+..+..+.
T Consensus 187 ~~~~~P~~l~~l~ 199 (386)
T TIGR02372 187 LIVGTPFIWEQLA 199 (386)
T ss_pred EEEECcHHHHHHH
Confidence 6677776666553
No 205
>PLN00011 cysteine synthase
Probab=57.64 E-value=92 Score=28.84 Aligned_cols=90 Identities=13% Similarity=-0.043 Sum_probs=57.1
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCC-CCCC-CEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKK-DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g-d~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~ 120 (435)
++.+-.+..+..=|+++ |.+..+-...++.| +.+| +.|. ....+-.-..+.++|..+|..+..+-|.........
T Consensus 33 ~i~~K~E~~nPtGS~K~--R~a~~~l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~ 109 (323)
T PLN00011 33 RIAAKLEMMEPCSSVKD--RIAYSMIKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRI 109 (323)
T ss_pred eEEEEecccCCccccch--HHHHHHHHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHH
Confidence 45554443334444443 22222223333344 6777 5554 466677777788899999986666666655567778
Q ss_pred HHHhcCCeEEEEccc
Q 013850 121 QVKDSNPKLVITVPE 135 (435)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (435)
.++..+++++++++.
T Consensus 110 ~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 110 ILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCEEEEECCC
Confidence 899999999999864
No 206
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=57.15 E-value=46 Score=32.98 Aligned_cols=79 Identities=16% Similarity=0.190 Sum_probs=62.5
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcC--CCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAP--NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~--~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~v 130 (435)
..+|+......+.-+... .|+++.|+|-+.+| ++...++.+-+|+..|+++| |...+|+..+-.-..+.++.++
T Consensus 260 Avith~r~~~~a~g~~~~---~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 260 AVITHLRYLQGAAGFYYV---FGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 456776666655544444 49999999999888 46778888899999999976 6899999999998999999988
Q ss_pred EEccc
Q 013850 131 ITVPE 135 (435)
Q Consensus 131 i~~~~ 135 (435)
-.=.+
T Consensus 336 QYIGE 340 (649)
T KOG1179|consen 336 QYIGE 340 (649)
T ss_pred ehHHH
Confidence 76443
No 207
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=56.54 E-value=39 Score=30.39 Aligned_cols=64 Identities=28% Similarity=0.188 Sum_probs=51.2
Q ss_pred CCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEE-ecCCCCCHHHHHHHHHhcCCeEEEEccccHH
Q 013850 75 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS-TANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (435)
Q Consensus 75 g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v-~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (435)
.+++||.|+=...||.---+++.-|-..|+-.+ .+.-....+++...|+..+++.||+++++..
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 678999999999998766666777777887444 4455557899999999999999999987653
No 208
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=56.46 E-value=1.3e+02 Score=29.89 Aligned_cols=98 Identities=10% Similarity=0.161 Sum_probs=67.3
Q ss_pred cCCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEec
Q 013850 39 SYSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTA 109 (435)
Q Consensus 39 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i 109 (435)
..++.+|++-..+| ..+|++.+...+..... ..+++.+|++...+|-.. .++..++..+..|...+..
T Consensus 192 ~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~ 268 (538)
T TIGR03208 192 PSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE---RLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ 268 (538)
T ss_pred CCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh---hcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec
Confidence 34566776543322 46788777665554443 347788998888887642 3445567777888876644
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
+.++...+...+++.++.++...+..+..+
T Consensus 269 -~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 269 -DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred -CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 566788888999999999998887766554
No 209
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=55.68 E-value=1.8e+02 Score=28.65 Aligned_cols=101 Identities=11% Similarity=0.008 Sum_probs=67.5
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~- 267 (435)
.|+.++++.... .+ ..-.+|...+...+..+...+.-.+ ..++++....+-+.-.-. .++.++..|+..+..
T Consensus 20 ~p~~~a~~~~~~--~~--~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~--~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 20 YGHKTALIFESS--GG--VVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIF--CWFGLAKIGAIMVPIN 93 (517)
T ss_pred CCCceEEEcccC--CC--ccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCeEEEEcC
Confidence 466777665321 11 1234788888777777665443222 223777777666554433 677888999988877
Q ss_pred CCCCHHHHHHHHHhcCceEEEecHHHHHH
Q 013850 268 GKFDIEMALRAIEKYRVTVWWVVPPIILA 296 (435)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P~~~~~ 296 (435)
+...+..+...+++.++..++..+.....
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFYPM 122 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchhHH
Confidence 45688999999999999999888765443
No 210
>PLN02654 acetate-CoA ligase
Probab=55.20 E-value=1.4e+02 Score=30.86 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=69.4
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~- 267 (435)
.++.+|++..... .+ ....+|.+.+...+..++..+.-.+ .++|++...+|..--+- ..++.++..|+..+..
T Consensus 102 ~~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v--~a~lA~~~~Gav~vpv~ 176 (666)
T PLN02654 102 NGDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELP--IAMLACARIGAVHSVVF 176 (666)
T ss_pred CCCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEEecC
Confidence 3566776642211 11 2356899999988888776554432 33488888887765433 3678889999988877
Q ss_pred CCCCHHHHHHHHHhcCceEEEecHH
Q 013850 268 GKFDIEMALRAIEKYRVTVWWVVPP 292 (435)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P~ 292 (435)
+.+.++.+...+++.++.++.+...
T Consensus 177 ~~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 177 AGFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCc
Confidence 5688999999999999999887654
No 211
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=53.90 E-value=93 Score=31.06 Aligned_cols=87 Identities=15% Similarity=0.104 Sum_probs=59.6
Q ss_pred cceeHHHHHHHHHHHHHHH-HhCCCCCCCEEEEEcCCCCc-HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEE
Q 013850 53 ESLSFSQFKSIVIKVSHSF-RHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L-~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~v 130 (435)
..+|...+.... .+..+ ...++.++|++..++|-.-. .....++++..|+..+...+....+.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 467777764322 22222 24578899988877764311 223346778899988776677788889999999999999
Q ss_pred EEccccHHHHh
Q 013850 131 ITVPELWDKVK 141 (435)
Q Consensus 131 i~~~~~~~~~~ 141 (435)
...+..+..+.
T Consensus 272 ~~~P~~~~~l~ 282 (539)
T PRK07008 272 AGVPTVWLGLL 282 (539)
T ss_pred EechHHHHHHH
Confidence 98887766554
No 212
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=53.59 E-value=74 Score=30.87 Aligned_cols=25 Identities=24% Similarity=0.297 Sum_probs=13.1
Q ss_pred HHHHHHHhhCCCCeeecCcCccccc
Q 013850 324 ELMEDCQKNIPGATIFQGYGMTETC 348 (435)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~yG~tE~~ 348 (435)
+...++.+.+.-..+-..+|-+|+.
T Consensus 351 ~~~~~f~~~l~l~~~a~slGg~~Sl 375 (432)
T PRK06702 351 EAAKEFIANVKLATLVTHVADARTC 375 (432)
T ss_pred HHHHHHHHhCccceeccccCCCCcc
Confidence 3344555554434455556666644
No 213
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=53.40 E-value=21 Score=32.26 Aligned_cols=53 Identities=6% Similarity=0.148 Sum_probs=43.2
Q ss_pred cceeHHHHHH-----HHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 53 ESLSFSQFKS-----IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 53 ~~~Ty~el~~-----~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
..+.|.++.. ....+...|.+.|+.+++.|.++|.++.....+++++-.+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4577777763 2466777778889999999999999999999999999889975
No 214
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=53.16 E-value=1.5e+02 Score=30.26 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=69.6
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~- 267 (435)
.|+.++++.... .+| ..-.+|.+.+...+..++..+.-.+ ..+|++...+|...-+- ..++.++..|+..+..
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAA--IAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCCEEeccC
Confidence 567788775332 122 2456899999888877776554332 33488888887665433 3678889999988876
Q ss_pred CCCCHHHHHHHHHhcCceEEEecHH
Q 013850 268 GKFDIEMALRAIEKYRVTVWWVVPP 292 (435)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P~ 292 (435)
+.+.+..+...+++.++.++++...
T Consensus 145 ~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 5678899999999999999887643
No 215
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=52.28 E-value=1.6e+02 Score=30.33 Aligned_cols=96 Identities=10% Similarity=0.013 Sum_probs=68.9
Q ss_pred CCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-C
Q 013850 191 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-G 268 (435)
Q Consensus 191 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~-~ 268 (435)
++.+|++.-..+. + ....+|.+.+...+..++..+.-.+ .++|++...+|..--.-. .++.++..|+..+.. +
T Consensus 75 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~--~~lA~~~~Gav~vpl~~ 149 (647)
T PTZ00237 75 RDQDALIYECPYL-K--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLI--AMLSCARIGATHCVLFD 149 (647)
T ss_pred CCceEEEEEcCCC-C--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeCC
Confidence 5667766532211 1 2356899999888887776554332 334999988887765444 678888889988766 5
Q ss_pred CCCHHHHHHHHHhcCceEEEecH
Q 013850 269 KFDIEMALRAIEKYRVTVWWVVP 291 (435)
Q Consensus 269 ~~~~~~~~~~l~~~~~t~~~~~P 291 (435)
.+.++.+...+++.++.++++..
T Consensus 150 ~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 150 GYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcc
Confidence 78899999999999999988754
No 216
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=52.20 E-value=1.5e+02 Score=30.40 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=68.8
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~- 267 (435)
.|+.+|++..... + .....+|++.+...+..++..+.-.+ ..+|++...++-.--+-. .++.++..|+..+..
T Consensus 80 ~p~~~Al~~~~~~--~-~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGDD--P-GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAV--AMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECCC--C-CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEecC
Confidence 4778887753211 1 13457899999998888776554432 234888887776654433 678888999998877
Q ss_pred CCCCHHHHHHHHHhcCceEEEecH
Q 013850 268 GKFDIEMALRAIEKYRVTVWWVVP 291 (435)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P 291 (435)
+.+.+..+...+++.++.++++..
T Consensus 155 ~~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 155 GGFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcC
Confidence 467889999999999999988754
No 217
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=51.98 E-value=1.3e+02 Score=27.26 Aligned_cols=90 Identities=12% Similarity=0.017 Sum_probs=56.6
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~ 120 (435)
.++.+-.+..+..=|+++=.. ...+...+ +.|. .+|+.|+. ...+-.-..+.++|.+.|..+..+-|.........
T Consensus 23 ~~i~~K~E~~nptGS~K~R~a-~~~v~~a~-~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 99 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKDRPA-LSMIVEAE-KRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKA 99 (290)
T ss_pred CeEEEEEccCCCCccHHHHHH-HHHHHHHH-HcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 345555554344445554111 12233333 3353 67776544 55566777778888899987766666665566677
Q ss_pred HHHhcCCeEEEEcc
Q 013850 121 QVKDSNPKLVITVP 134 (435)
Q Consensus 121 ~l~~~~~~~vi~~~ 134 (435)
.++..++++++++.
T Consensus 100 ~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 100 AMRAYGAELILVTK 113 (290)
T ss_pred HHHHcCCEEEEeCC
Confidence 89999999999975
No 218
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=51.59 E-value=1.4e+02 Score=27.20 Aligned_cols=61 Identities=13% Similarity=0.046 Sum_probs=42.7
Q ss_pred hCC-CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc
Q 013850 73 HLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 73 ~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (435)
+.| +++|+. .|=...+---+...+.|...|.-++.+=|..-..+...+|+..++++++++.
T Consensus 55 ~~G~l~pG~t-IVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGT-IVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCE-EEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 345 789994 3333334445556666777787666655655556678899999999999997
No 219
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=51.31 E-value=36 Score=25.07 Aligned_cols=53 Identities=6% Similarity=0.070 Sum_probs=38.4
Q ss_pred cceeHHHHHHH----HHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 53 ESLSFSQFKSI----VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 53 ~~~Ty~el~~~----~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
..+.+.++.+. ...+...+...++.+++.|+++|.++.....+...+..+|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 34566665433 235666676678888999999999988777777888888864
No 220
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=51.18 E-value=74 Score=30.94 Aligned_cols=55 Identities=20% Similarity=0.256 Sum_probs=35.3
Q ss_pred CCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 013850 75 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 75 g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~~~~~l~~~~~~~vi~~ 133 (435)
++++||.|++-.+ .+.....++...|+.++.++.+ .+.+.++..+.. +.++|++.
T Consensus 107 ~~~pGd~VIv~~~---t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAA---GFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 7889998776543 3355566777788877766542 346667666643 56666664
No 221
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=51.10 E-value=1e+02 Score=31.82 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=68.5
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHH--hCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEe
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFR--HLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIAST 108 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~--~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~ 108 (435)
.|+.+|++.-.+| ..+|++.+...+..+...+. ...+.++|++..++|-. .+... .+.++..|+..+.
T Consensus 218 ~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~ 296 (660)
T PLN02861 218 QKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGF 296 (660)
T ss_pred CCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEE
Confidence 4677777644333 57899998877766655442 12357889888888854 44443 4456788988765
Q ss_pred cCCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 109 ANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 109 i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
.. .+.+.+...++..+|.+++..+..+..+.
T Consensus 297 ~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~ 327 (660)
T PLN02861 297 WQ--GDIRYLMEDVQALKPTIFCGVPRVYDRIY 327 (660)
T ss_pred eC--CCHHHHHHHHHHhCCcEEeechHHHHHHH
Confidence 53 35678888999999999999888776654
No 222
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=50.77 E-value=31 Score=26.09 Aligned_cols=41 Identities=20% Similarity=0.339 Sum_probs=32.5
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 65 ~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
..+...+...|+.+++.|.++|..+.....+...+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45566677788989999999999887777777777788863
No 223
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=50.40 E-value=1.6e+02 Score=29.38 Aligned_cols=93 Identities=16% Similarity=0.137 Sum_probs=62.4
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.++++...+| ..+|+..+......+ ....++.++|++....|-.- .++..+++.+..|+..+...
T Consensus 185 ~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~ 261 (547)
T PRK06087 185 HGDELAAVLFTSGTEGLPKGVMLTHNNILASERAY---CARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD 261 (547)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHH---HHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC
Confidence 3456666544333 457888876554433 33457889998888776542 24456777788899888765
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEcccc
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPEL 136 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (435)
..+.+.+...+++.++.+++..+..
T Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~~~~ 286 (547)
T PRK06087 262 -IFTPDACLALLEQQRCTCMLGATPF 286 (547)
T ss_pred -CCCHHHHHHHHHHcCCCEEeccHHH
Confidence 4567777888899999988865443
No 224
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=49.93 E-value=1.8e+02 Score=28.93 Aligned_cols=91 Identities=18% Similarity=0.089 Sum_probs=60.5
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCC-CCCEEEEEcCCCCc-HHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGIT-KKDVVLIFAPNSIH-FPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~-~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.+|++...+| ..+|+..+...+..++.. .++. ++|++...+|-... .+..+++.+..|++.+..+
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 4566777644333 568999888777766554 3677 88988887776532 2335677888899887654
Q ss_pred C-CC--CHHHHHHHHHhcCCeEEEEc
Q 013850 111 P-VY--TVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 111 ~-~~--~~~~~~~~l~~~~~~~vi~~ 133 (435)
. .+ ....+...+++.++.++.+.
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~p 252 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAAP 252 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeCC
Confidence 3 12 34567778888998876543
No 225
>PRK06060 acyl-CoA synthetase; Validated
Probab=49.89 E-value=1.4e+02 Score=31.18 Aligned_cols=99 Identities=17% Similarity=0.117 Sum_probs=66.1
Q ss_pred CCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecCC
Q 013850 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~~ 111 (435)
++.+|++...+| ..+|++.+...+..+.. ...++.++|++....+-.. .+...++..+..|++.+..+.
T Consensus 144 ~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 221 (705)
T PRK06060 144 GDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSA 221 (705)
T ss_pred CCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCC
Confidence 466777644333 46788877766554432 1346788888776665432 233345677788988877665
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
......+...+++.++.++...+..+..+.
T Consensus 222 ~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~ 251 (705)
T PRK06060 222 PVTPEAAAILSARFGPSVLYGVPNFFARVI 251 (705)
T ss_pred CCCHHHHHHHHHhcCCeEEeeHHHHHHHHH
Confidence 667777788889999999998887766554
No 226
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=49.87 E-value=83 Score=29.27 Aligned_cols=68 Identities=13% Similarity=0.126 Sum_probs=48.2
Q ss_pred HHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc--ccHHHHh
Q 013850 70 SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP--ELWDKVK 141 (435)
Q Consensus 70 ~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~--~~~~~~~ 141 (435)
.|++.+++||++|+|+.--+.-++.+.+|-. +|+.++-++-+. +-....++.+++.++... +..+.++
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka-~ga~Via~~~~~---~K~e~a~~lGAd~~i~~~~~~~~~~~~ 227 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKA-MGAEVIAITRSE---EKLELAKKLGADHVINSSDSDALEAVK 227 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHH-cCCeEEEEeCCh---HHHHHHHHhCCcEEEEcCCchhhHHhH
Confidence 4566799999999999998888888777764 347777665442 234466788999999864 3444443
No 227
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=49.85 E-value=1.2e+02 Score=23.98 Aligned_cols=44 Identities=7% Similarity=0.023 Sum_probs=37.3
Q ss_pred cHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc
Q 013850 91 HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 91 ~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (435)
...++...+-..|.-++-+..+.+.+++.....+.+|++|..+.
T Consensus 19 G~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 19 GNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 34455556667899999999999999999999999999999874
No 228
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=49.44 E-value=81 Score=29.92 Aligned_cols=63 Identities=16% Similarity=0.187 Sum_probs=38.7
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCCeEEE
Q 013850 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVI 131 (435)
Q Consensus 65 ~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~~~~~l~~~~~~~vi 131 (435)
..+...|...++++||.|++..+ .+.....++...|+.++.++.+ .+.+.++..+.. +.++|+
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 33444556667889998765443 3444455667788877666432 356777776653 566666
No 229
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=49.02 E-value=1.5e+02 Score=29.61 Aligned_cols=99 Identities=15% Similarity=0.076 Sum_probs=68.6
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc-HHHHHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~ 111 (435)
.++.+|++...+| ..+|+..+........ ...++++++++...+|-... .+..+++.+..|+++++.+
T Consensus 178 ~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~- 253 (542)
T PRK06155 178 QPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSA---EDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEP- 253 (542)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHH---HhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeC-
Confidence 4566777644333 4568888766544433 34578899999888775322 2334678888899887654
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
..+.+.+...+++.++..+...+.....+..
T Consensus 254 ~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 284 (542)
T PRK06155 254 RFSASGFWPAVRRHGATVTYLLGAMVSILLS 284 (542)
T ss_pred CCCHHHHHHHHHHhCCcEEEchHHHHHHHHc
Confidence 5678888899999999999988776665543
No 230
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=48.58 E-value=97 Score=31.05 Aligned_cols=91 Identities=10% Similarity=0.065 Sum_probs=72.5
Q ss_pred ceeeccHHHHHHHHHHHhhhhhc---cCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCc
Q 013850 209 GVILTHKNFIAASLMISAHQELV---GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRV 284 (435)
Q Consensus 209 ~v~~t~~~l~~~~~~~~~~~~~~---~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~ 284 (435)
+..+|++.+...+..++..+.-. ..++|++....|-..-+.. ..+.++..|+.+.-. +.++...+...++.-++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~--~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ 120 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE--LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKP 120 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCccccccCcccCHHHHHHHHHhcCC
Confidence 78899999999888887766532 2345999999988876655 467788888888766 46789999999999999
Q ss_pred eEEEecHHHHHHHHhcc
Q 013850 285 TVWWVVPPIILALAKNS 301 (435)
Q Consensus 285 t~~~~~P~~~~~l~~~~ 301 (435)
.+++.....+..+.+..
T Consensus 121 kiif~d~~~~~~i~~~~ 137 (537)
T KOG1176|consen 121 KLIFVDEDFYDKISEAT 137 (537)
T ss_pred eEEEEcCchHHHHHHHH
Confidence 99999888888776543
No 231
>PRK09188 serine/threonine protein kinase; Provisional
Probab=48.58 E-value=6.4 Score=37.06 Aligned_cols=12 Identities=0% Similarity=0.047 Sum_probs=10.2
Q ss_pred cCcceecCCCCC
Q 013850 423 TDSFIRGKDQQT 434 (435)
Q Consensus 423 ~~~~~~tgD~~~ 434 (435)
.+|||+|||++.
T Consensus 207 ~dgW~~TGDlg~ 218 (365)
T PRK09188 207 SRIWLATGKKVY 218 (365)
T ss_pred cCcEEeCCCEEE
Confidence 578999999885
No 232
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=48.44 E-value=1.5e+02 Score=26.86 Aligned_cols=92 Identities=9% Similarity=-0.059 Sum_probs=57.1
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~ 120 (435)
.++.+-.+..+..-||+.-. +..+-..+++.|. ++|+.|+ ....+-.-..+.++|.++|..++.+-|.........
T Consensus 17 ~~i~~K~E~~~ptgS~K~R~--a~~~l~~a~~~g~~~~~~~vv-~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 93 (291)
T cd01561 17 AEIYAKLEFFNPGGSVKDRI--ALYMIEDAEKRGLLKPGTTII-EPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRK 93 (291)
T ss_pred CeEEEEecccCCCCcchHHH--HHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 34555554433444554422 1222223334453 3566554 466677778888899999987666666655566667
Q ss_pred HHHhcCCeEEEEcccc
Q 013850 121 QVKDSNPKLVITVPEL 136 (435)
Q Consensus 121 ~l~~~~~~~vi~~~~~ 136 (435)
.++..++++++++...
T Consensus 94 ~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 94 LLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCEEEEeCCCC
Confidence 8899999999998754
No 233
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=48.41 E-value=1.8e+02 Score=29.80 Aligned_cols=97 Identities=15% Similarity=0.112 Sum_probs=68.1
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~- 267 (435)
.|+.++++... ..+|. .-.+|.+.+...+..++..+.-.+. .+|++...+|..--.- ..++.++..|+..+..
T Consensus 65 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v--~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAV--FAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHhCCEEEecC
Confidence 46677766532 22222 2458999998888877765544333 3488888887765433 3678889999988766
Q ss_pred CCCCHHHHHHHHHhcCceEEEecH
Q 013850 268 GKFDIEMALRAIEKYRVTVWWVVP 291 (435)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P 291 (435)
+.+....+...+++.++.++++..
T Consensus 140 ~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCHHHHHHHHHhcCceEEEECC
Confidence 567889999999999999888753
No 234
>PRK06381 threonine synthase; Validated
Probab=48.38 E-value=1.6e+02 Score=27.13 Aligned_cols=88 Identities=10% Similarity=-0.042 Sum_probs=56.3
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l 122 (435)
++.+-.+..+..=||++ +.+..+...+++.|. +.| +....+-.-..+.++|...|..++.+-|..........+
T Consensus 32 ~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l 105 (319)
T PRK06381 32 KIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEM 105 (319)
T ss_pred eEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHH
Confidence 56666655455566666 223333333444452 344 445567777778888999998666655555545556788
Q ss_pred HhcCCeEEEEcccc
Q 013850 123 KDSNPKLVITVPEL 136 (435)
Q Consensus 123 ~~~~~~~vi~~~~~ 136 (435)
+..++++++++.+.
T Consensus 106 ~~~GA~V~~~~~~~ 119 (319)
T PRK06381 106 EKYGAEIIYVDGKY 119 (319)
T ss_pred HHcCCEEEEcCCCH
Confidence 99999999998653
No 235
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=47.98 E-value=1.9e+02 Score=25.27 Aligned_cols=93 Identities=12% Similarity=0.057 Sum_probs=56.7
Q ss_pred CCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHH
Q 013850 41 SSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (435)
Q Consensus 41 p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~ 120 (435)
..++.+-.++.+..-|+++-.. ..+...+++.|..+++.|.. ...+-.-..+.++|...|..++.+-|.........
T Consensus 14 ~~~l~~K~e~~~ptgS~K~R~a--~~~l~~a~~~g~~~~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~ 90 (244)
T cd00640 14 GANIYLKLEFLNPTGSFKDRGA--LNLILLAEEEGKLPKGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVA 90 (244)
T ss_pred CCEEEEEecccCCcCCcHHHHH--HHHHHHHHHcCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 3455555554444555654322 22233333434334554444 44456666777788889986666666666667778
Q ss_pred HHHhcCCeEEEEcccc
Q 013850 121 QVKDSNPKLVITVPEL 136 (435)
Q Consensus 121 ~l~~~~~~~vi~~~~~ 136 (435)
.++..+++++.++...
T Consensus 91 ~~~~~Ga~v~~~~~~~ 106 (244)
T cd00640 91 QMRALGAEVVLVPGDF 106 (244)
T ss_pred HHHHCCCEEEEECCCH
Confidence 8899999999998763
No 236
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=47.96 E-value=2e+02 Score=29.71 Aligned_cols=94 Identities=16% Similarity=0.115 Sum_probs=67.4
Q ss_pred CCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-CC
Q 013850 192 TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GK 269 (435)
Q Consensus 192 ~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~-~~ 269 (435)
++++++.... +|. ...+|.+.+...+..++..+.-.+ ..+|++...+|...-+-. .++.++..|+..+.. +.
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~--~~lA~~~~Gav~vp~~~~ 172 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVV--AMLATASVGAIWSSCSPD 172 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHhCeEEEecCCC
Confidence 4666655422 222 346899999988888776654432 334899888887754443 678888889888777 56
Q ss_pred CCHHHHHHHHHhcCceEEEecH
Q 013850 270 FDIEMALRAIEKYRVTVWWVVP 291 (435)
Q Consensus 270 ~~~~~~~~~l~~~~~t~~~~~P 291 (435)
+..+.+...+++.++.++++..
T Consensus 173 ~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 173 FGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CCHHHHHHHHHhcCCcEEEEcc
Confidence 7889999999999998888754
No 237
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=47.77 E-value=61 Score=22.26 Aligned_cols=51 Identities=20% Similarity=0.319 Sum_probs=39.1
Q ss_pred HHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCcHHHHHHHHhhCCCCee
Q 013850 273 EMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATI 338 (435)
Q Consensus 273 ~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~ 338 (435)
..+++.+.+++++++. +..+-.++-+.+.+....-..+.+.+++.||+..+
T Consensus 19 ~~i~~~l~~~~v~ii~---------------K~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIA---------------KDTNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEE---------------EecCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 6788999999999876 23344577777777777778899999999986544
No 238
>PRK05857 acyl-CoA synthetase; Validated
Probab=47.49 E-value=1.6e+02 Score=29.38 Aligned_cols=95 Identities=13% Similarity=-0.022 Sum_probs=66.1
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~ 268 (435)
.|+.++++...+ ...+|.+.+...+..++..+.-... .++++...++-+..+- ..++.++..|+..+..+
T Consensus 27 ~p~~~a~~~~~~-------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~--~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 27 QPEAIALRRCDG-------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETY--LSVLACAKLGAIAVMAD 97 (540)
T ss_pred CCCcEEEeecCC-------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEecC
Confidence 467776654322 1458999998888777765543222 3377777776655433 36788899999999775
Q ss_pred -CCCHHHHHHHHHhcCceEEEecHHH
Q 013850 269 -KFDIEMALRAIEKYRVTVWWVVPPI 293 (435)
Q Consensus 269 -~~~~~~~~~~l~~~~~t~~~~~P~~ 293 (435)
.+....+...++..++..+...+..
T Consensus 98 ~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 98 GNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred ccCCHHHHHHHHHhcCCceEEEeccc
Confidence 4678889899998888888776643
No 239
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=47.32 E-value=1.1e+02 Score=28.90 Aligned_cols=66 Identities=18% Similarity=0.151 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCC-----CCCHHHHHHHHHh---cCCeEEEEc
Q 013850 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-----VYTVSELSKQVKD---SNPKLVITV 133 (435)
Q Consensus 65 ~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~~~~~l~~---~~~~~vi~~ 133 (435)
..+...++..++++||.|++-.+. +....-++...|+.++.++. ..+.+.++..++. -++++|+..
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 344455556678999987666543 34445667778987666543 2456777777763 356676643
No 240
>PRK06145 acyl-CoA synthetase; Validated
Probab=47.22 E-value=2.2e+02 Score=27.88 Aligned_cols=99 Identities=14% Similarity=0.173 Sum_probs=66.0
Q ss_pred cCCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEec
Q 013850 39 SYSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTA 109 (435)
Q Consensus 39 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i 109 (435)
..++.++++...+| ..+|+..+...+.. .....++..+|++....|-.- .+....++++..|+..+..
T Consensus 146 ~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~ 222 (497)
T PRK06145 146 VAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSID---HVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH 222 (497)
T ss_pred CCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHH---HHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC
Confidence 34566666533222 56888888654432 334558899999888776431 2223345667788876654
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
+..+...+...+++.++.++...+.....+.
T Consensus 223 -~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll 253 (497)
T PRK06145 223 -REFDPEAVLAAIERHRLTCAWMAPVMLSRVL 253 (497)
T ss_pred -CcCCHHHHHHHHHHhCCeEEEehHHHHHHHH
Confidence 4567888888999999999999887766554
No 241
>PRK07476 eutB threonine dehydratase; Provisional
Probab=46.62 E-value=1.2e+02 Score=28.04 Aligned_cols=53 Identities=11% Similarity=0.033 Sum_probs=39.5
Q ss_pred EEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 013850 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (435)
Q Consensus 84 l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (435)
+....+-.-..+.++|.+.|..++.+-|..........++..++++++++...
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQ 123 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 34455666777788889999876666666655666778899999999998643
No 242
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=46.31 E-value=2.3e+02 Score=29.49 Aligned_cols=103 Identities=13% Similarity=0.041 Sum_probs=70.4
Q ss_pred eeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEE
Q 013850 210 VILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (435)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~ 287 (435)
..+|.+.+...+..++..+.-.+ ..+|++...++-..-.- ...+.++..|+..+.. +.+.++.+...|++.++.++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWL--IALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 45789998888777765443322 23377666665443222 3567788889888866 56789999999999999999
Q ss_pred EecHHHHHHHHhcccccCCCCcceeEEEecC
Q 013850 288 WVVPPIILALAKNSLVRKFDISSLKLVGSGA 318 (435)
Q Consensus 288 ~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG 318 (435)
++....+..+.+... .++.++.+++-+
T Consensus 183 i~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 183 ICDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred EECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 998887777665322 234566665443
No 243
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=46.04 E-value=36 Score=28.68 Aligned_cols=49 Identities=12% Similarity=0.119 Sum_probs=34.2
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
..+||.++.+.+.++|..+++-|.+|.-.|++.-. + ++.+-+=|-.+|.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRG-G--~~pariLsd~L~~ 53 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARG-G--LIPARILSDFLGV 53 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCC-c--eehHHHHHHHhCC
Confidence 57899999999999999999889988655554332 2 3333444444443
No 244
>PRK09224 threonine dehydratase; Reviewed
Probab=45.74 E-value=1.1e+02 Score=30.37 Aligned_cols=91 Identities=18% Similarity=0.149 Sum_probs=55.6
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.++....-||+. .-..+.+++ |.+....+ -.+....+-....+.++|.++|..++.+-|...+......
T Consensus 35 ~~i~lK~E~lqptgSfK~-RgA~n~i~~-l~~~~~~~---gvV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~ 109 (504)
T PRK09224 35 NQVLLKREDLQPVFSFKL-RGAYNKMAQ-LTEEQLAR---GVITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDA 109 (504)
T ss_pred CEEEEEecCCCCCCCChH-HHHHHHHHh-hhHHhcCC---EEEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 456665555445567766 222333333 32211122 2344556677778888999999866655566555555667
Q ss_pred HHhcCCeEEEEccccH
Q 013850 122 VKDSNPKLVITVPELW 137 (435)
Q Consensus 122 l~~~~~~~vi~~~~~~ 137 (435)
++..+++++++...+.
T Consensus 110 ~r~~GA~Vi~~g~~~~ 125 (504)
T PRK09224 110 VRAFGGEVVLHGDSFD 125 (504)
T ss_pred HHhCCCEEEEECCCHH
Confidence 8999999999986543
No 245
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=45.63 E-value=2.6e+02 Score=26.09 Aligned_cols=55 Identities=29% Similarity=0.367 Sum_probs=28.7
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC----CCHHHHHHHHHhcCCeEEEEc
Q 013850 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 76 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~~~~~l~~~~~~~vi~~ 133 (435)
+++||.|++--| ++. ....++...|+..++++.+ .+.+.+...++..++++|+..
T Consensus 97 ~~~gd~Vlv~~p-~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~ 155 (351)
T PRK14807 97 INKGDVVIYPHP-SFA--MYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLC 155 (351)
T ss_pred cCCCCEEEEeCC-ChH--HHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEe
Confidence 467777766543 222 2333445566655554332 344566666654466666543
No 246
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=45.26 E-value=1e+02 Score=28.36 Aligned_cols=67 Identities=10% Similarity=0.092 Sum_probs=50.9
Q ss_pred HHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH
Q 013850 69 HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (435)
Q Consensus 69 ~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (435)
+.|++.|+.||.+|+|..--+.-++.+.+|.+ .|.-++.++... ..-+..++..+++..+...+...
T Consensus 172 spLk~~g~~pG~~vgI~GlGGLGh~aVq~AKA-MG~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d 238 (360)
T KOG0023|consen 172 SPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKA-MGMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPD 238 (360)
T ss_pred ehhHHcCCCCCcEEEEecCcccchHHHHHHHH-hCcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHH
Confidence 35777899999999999999999998888875 466666665543 23456788999999987664433
No 247
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=45.13 E-value=1.5e+02 Score=28.91 Aligned_cols=89 Identities=12% Similarity=-0.076 Sum_probs=56.7
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
++.+-.+..+..-|++.=. ....+...+ +.|. .+|+.|. ....+-.-..+.++|.++|..+..+-|.....+....
T Consensus 27 ~i~~K~E~~nptGS~K~R~-a~~~l~~a~-~~g~~~~g~~vv-~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 103 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKDRI-ALRMIEDAE-ASGRLKPGDTII-EPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDV 103 (454)
T ss_pred eEEEEEhhcCCCcchHHHH-HHHHHHHHH-HcCCCCCCCEEE-EeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHH
Confidence 4555555434445555421 112333333 3454 6777654 4466667777888999999876666665555666778
Q ss_pred HHhcCCeEEEEcc
Q 013850 122 VKDSNPKLVITVP 134 (435)
Q Consensus 122 l~~~~~~~vi~~~ 134 (435)
++..++++++++.
T Consensus 104 ~~~~GA~v~~~~~ 116 (454)
T TIGR01137 104 LKALGAEIVRTPT 116 (454)
T ss_pred HHHCCCEEEEcCC
Confidence 8999999999975
No 248
>PRK07867 acyl-CoA synthetase; Validated
Probab=45.10 E-value=2.4e+02 Score=28.13 Aligned_cols=97 Identities=14% Similarity=0.121 Sum_probs=62.2
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC--cHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.++++...+| ..+|++.+...+..+.. ..++.++|++...+|-.- ..+..+++.+..|++.+. .
T Consensus 150 ~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~-~ 225 (529)
T PRK07867 150 DPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQ---RFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIAL-R 225 (529)
T ss_pred CccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHH---hhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEe-c
Confidence 4566666543323 56788888766555443 347888998877766432 222334455666776554 4
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
+..+.+.+...+++.++.++...+.....+
T Consensus 226 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 255 (529)
T PRK07867 226 RKFSASGFLPDVRRYGATYANYVGKPLSYV 255 (529)
T ss_pred CCCCHHHHHHHHHHhCCeEEeccHHHHHHH
Confidence 566788888889999999987766555443
No 249
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=44.90 E-value=40 Score=29.71 Aligned_cols=68 Identities=10% Similarity=0.109 Sum_probs=52.1
Q ss_pred HHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCC--HHHHHHHHH-hcCCeEEEEcccc
Q 013850 69 HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT--VSELSKQVK-DSNPKLVITVPEL 136 (435)
Q Consensus 69 ~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~--~~~~~~~l~-~~~~~~vi~~~~~ 136 (435)
..+.+.-.-||.-=.+.+|.++.++++--++.-++.+-+|++|+++ .+.+..+++ ++.++++|.++..
T Consensus 100 D~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPg 170 (375)
T KOG0633|consen 100 DLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPG 170 (375)
T ss_pred HHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCC
Confidence 3444445568855567888999999999999999999999999875 567777776 5589999876543
No 250
>PLN02574 4-coumarate--CoA ligase-like
Probab=44.75 E-value=2.5e+02 Score=28.17 Aligned_cols=99 Identities=22% Similarity=0.249 Sum_probs=67.9
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh-cc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL-VG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~ 267 (435)
.++.++++... +| ..+|...+...+..++..+.- .+ ..+|++....+-...+ ...++.++..|+..+..
T Consensus 52 ~~~~~a~~~~~---~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALIDSS---TG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF--PVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEECC---CC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH--HHHHHHHHHhCeEEeCc
Confidence 45666666422 22 246888888887777665543 22 2348888777655432 23678889999998877
Q ss_pred C-CCCHHHHHHHHHhcCceEEEecHHHHHHH
Q 013850 268 G-KFDIEMALRAIEKYRVTVWWVVPPIILAL 297 (435)
Q Consensus 268 ~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l 297 (435)
+ ......+...+++.++..++..+.....+
T Consensus 123 ~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 123 NPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred CcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 5 46788999999999999988887765554
No 251
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=44.59 E-value=2.4e+02 Score=28.24 Aligned_cols=82 Identities=12% Similarity=-0.023 Sum_probs=63.8
Q ss_pred eeeccHHHHHHHHHHHhhhhh-ccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEE
Q 013850 210 VILTHKNFIAASLMISAHQEL-VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (435)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~-~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~ 287 (435)
-.+|.+.+...+..++..+.- ...++|++..++|..--... .++.++..|+..... +.|.++.+...+.+.++.++
T Consensus 39 ~~~Ty~~L~~~v~r~A~~L~~~~gvkGDrV~iymp~~pe~~~--a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~v 116 (528)
T COG0365 39 RELTYGDLRREVARLANALKDLGGVKGDRVAIYMPNSPEAVI--ALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVL 116 (528)
T ss_pred eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEE
Confidence 678899998888877766542 22266999999998876554 688889899877666 67899999999999988888
Q ss_pred EecHHH
Q 013850 288 WVVPPI 293 (435)
Q Consensus 288 ~~~P~~ 293 (435)
.+....
T Consensus 117 it~d~~ 122 (528)
T COG0365 117 IADDGT 122 (528)
T ss_pred EEeccc
Confidence 765543
No 252
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=44.37 E-value=44 Score=27.62 Aligned_cols=76 Identities=13% Similarity=0.099 Sum_probs=47.5
Q ss_pred hcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCCCc-HHHHHHHHhhCCCCe
Q 013850 259 QKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLG-KELMEDCQKNIPGAT 337 (435)
Q Consensus 259 ~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~-~~~~~~~~~~~~~~~ 337 (435)
+..+.++++++.....+.+.+ ..++..-..-+.++..+++..... ..|..+.||.+-. .+..+.+++.+|+..
T Consensus 3 ~~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~ 76 (172)
T PF03808_consen 3 LNSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLR 76 (172)
T ss_pred HHhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeE
Confidence 345667777665555555555 444444455566777777654333 3577788876533 566668888888777
Q ss_pred eec
Q 013850 338 IFQ 340 (435)
Q Consensus 338 ~~~ 340 (435)
+.-
T Consensus 77 ivg 79 (172)
T PF03808_consen 77 IVG 79 (172)
T ss_pred EEE
Confidence 764
No 253
>PLN03102 acyl-activating enzyme; Provisional
Probab=44.28 E-value=2.7e+02 Score=28.10 Aligned_cols=95 Identities=8% Similarity=0.064 Sum_probs=66.3
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~ 268 (435)
.|+.++++.- + -.+|.+.+...+..+...+.-.+ ..+|++...++-.-- +...++.++..|+.++...
T Consensus 27 ~p~~~Al~~~--~-------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e--~~~~~la~~~~G~~~vpl~ 95 (579)
T PLN03102 27 YPNRTSIIYG--K-------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPA--MYEMHFAVPMAGAVLNPIN 95 (579)
T ss_pred CCCCeEEEEC--C-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeecc
Confidence 4666666541 1 25889998888777766554322 334888777775443 2336788899999888774
Q ss_pred -CCCHHHHHHHHHhcCceEEEecHHHHH
Q 013850 269 -KFDIEMALRAIEKYRVTVWWVVPPIIL 295 (435)
Q Consensus 269 -~~~~~~~~~~l~~~~~t~~~~~P~~~~ 295 (435)
......+...++..++.++.+.+....
T Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (579)
T PLN03102 96 TRLDATSIAAILRHAKPKILFVDRSFEP 123 (579)
T ss_pred ccCCHHHHHHHHhccCCeEEEEChhhHH
Confidence 568899999999999999998765543
No 254
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.23 E-value=2.3e+02 Score=28.22 Aligned_cols=87 Identities=15% Similarity=0.152 Sum_probs=57.5
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCC-cHHHHHHHHHHcCcEEEecC-CCCCHHHHHHHHHhcCCeE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTAN-PVYTVSELSKQVKDSNPKL 129 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~i~-~~~~~~~~~~~l~~~~~~~ 129 (435)
..+|+..+...+..+.. ..++ ..+|++.+..|-.. ..+..+++.+..|+..+..+ ...+++.+...+++.++.+
T Consensus 192 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~ 268 (542)
T PRK07786 192 AVLTHANLTGQAMTCLR---TNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTG 268 (542)
T ss_pred hhhhHHHHHHHHHHHHH---hcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeE
Confidence 46788887665554433 3355 45565555544321 12345777888998877543 2457788899999999999
Q ss_pred EEEccccHHHHhh
Q 013850 130 VITVPELWDKVKD 142 (435)
Q Consensus 130 vi~~~~~~~~~~~ 142 (435)
+...+..+..+..
T Consensus 269 ~~~~P~~l~~l~~ 281 (542)
T PRK07786 269 IFLVPAQWQAVCA 281 (542)
T ss_pred EEehHHHHHHHHh
Confidence 9998887766643
No 255
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.20 E-value=1.8e+02 Score=28.93 Aligned_cols=94 Identities=11% Similarity=0.044 Sum_probs=61.1
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCC-CEEEEEcCCC--CcHHHHHHHHHHcCcEEEec
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKK-DVVLIFAPNS--IHFPICFLGVIAIGAIASTA 109 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g-d~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i 109 (435)
.++.++++...+| ..+|++.+...+..+.. ..++.++ |++...+|.. ..++..+++.+..|+..+.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 3566776644333 46899888765554433 3467776 7887777654 34444566778889988877
Q ss_pred CCCC---CHHHHHHHHHhcCCeEEEEcccc
Q 013850 110 NPVY---TVSELSKQVKDSNPKLVITVPEL 136 (435)
Q Consensus 110 ~~~~---~~~~~~~~l~~~~~~~vi~~~~~ 136 (435)
.+.. .+..+..++++.++.++.+.+..
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 256 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPNFA 256 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECchHH
Confidence 6532 45566788999999987654433
No 256
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=43.39 E-value=1.7e+02 Score=28.58 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=44.5
Q ss_pred cceeHHHHHHHHHHH--------------HHHH-HhCCCCCCCEEEEEcCCCCcHHHHHHH-HHHcCcEEE---------
Q 013850 53 ESLSFSQFKSIVIKV--------------SHSF-RHLGITKKDVVLIFAPNSIHFPICFLG-VIAIGAIAS--------- 107 (435)
Q Consensus 53 ~~~Ty~el~~~~~~l--------------a~~L-~~~g~~~gd~V~l~~~~~~~~~~~~lA-~~~~G~~~v--------- 107 (435)
..-||.+|.+.+..+ |..| ...++++||.| + +..++...-| +...|++++
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccc
Confidence 445888888886544 3333 35689999964 2 3334444444 778888776
Q ss_pred -----ecCCCCCHHHHHHHHHhcC
Q 013850 108 -----TANPVYTVSELSKQVKDSN 126 (435)
Q Consensus 108 -----~i~~~~~~~~~~~~l~~~~ 126 (435)
|...+.+.+.++..++...
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 3344567888988887543
No 257
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=43.33 E-value=2.6e+02 Score=29.45 Aligned_cols=118 Identities=14% Similarity=0.059 Sum_probs=76.6
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh----ccCCC-----------cEEEecchHHHHHHHHHHH
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL----VGELD-----------HVVLCVLPMFHVFGLSVIL 254 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~----~~~~~-----------d~~l~~~~l~~~~g~~~~~ 254 (435)
.++.++++....| .+ -..+|.+.+...+..++..+.- .-..+ |++...++-..- +....
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e--w~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN--WLVAD 147 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH--HHHHH
Confidence 3567776543222 11 2468899998888887765542 11221 555555544322 22356
Q ss_pred HhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEec
Q 013850 255 YDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSG 317 (435)
Q Consensus 255 ~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~g 317 (435)
+.++..|+..+.. +.+.++.+...+++-++.++++.+..+..+.+... .++.++.+++-
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~~ 207 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLIIL 207 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEEE
Confidence 7778888888766 56789999999999999999998888777765421 34567776554
No 258
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=42.77 E-value=3.3e+02 Score=26.57 Aligned_cols=85 Identities=13% Similarity=0.128 Sum_probs=60.4
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcH-HHHHHHHHHcCcEEEecCCC--CCHHHHHHHHHhcCCeE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPV--YTVSELSKQVKDSNPKL 129 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~~v~i~~~--~~~~~~~~~l~~~~~~~ 129 (435)
..+|++.+...+..++.. .++..++++....+-+... +...++.+..|...+..+.. .+...+...+++.++..
T Consensus 161 v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~ 237 (503)
T PRK04813 161 VQISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINV 237 (503)
T ss_pred EEeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeE
Confidence 578999888766655544 4678888888777765322 34456778889888776653 35667778889999999
Q ss_pred EEEccccHHHH
Q 013850 130 VITVPELWDKV 140 (435)
Q Consensus 130 vi~~~~~~~~~ 140 (435)
+...+.....+
T Consensus 238 ~~~~p~~~~~~ 248 (503)
T PRK04813 238 WVSTPSFADMC 248 (503)
T ss_pred EEeChHHHHHH
Confidence 98887766543
No 259
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=42.70 E-value=2.8e+02 Score=27.33 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=49.0
Q ss_pred hCCCCCCCEEEEEcCCCC-cHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 73 HLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 73 ~~g~~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
..++.+++++...++-.. ......+..+..|+..+.. +..+.+.+...+++.++.+++..+.....+.
T Consensus 190 ~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 258 (509)
T PRK12406 190 IYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFIRLL 258 (509)
T ss_pred hcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHHHHH
Confidence 458899998887776432 2223344456778876654 4567888999999999999999888766554
No 260
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=42.63 E-value=1.8e+02 Score=23.70 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=66.3
Q ss_pred HHhhhhcCcEEEecCCCCHHHHHHHHHhc-CceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCC-------CcHHH
Q 013850 254 LYDQLQKGNCVVSMGKFDIEMALRAIEKY-RVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAP-------LGKEL 325 (435)
Q Consensus 254 ~~~~l~~G~~i~~~~~~~~~~~~~~l~~~-~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~-------l~~~~ 325 (435)
....+..|.++.+-.+.....+.+.|.+. ++|++.-....+..|.+.. ..+.++.||.. ..+..
T Consensus 13 A~~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~~--------~~~vi~~GG~~~~~~~~~~G~~a 84 (161)
T PF00455_consen 13 AASLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSENP--------NIEVILLGGEVNPKSLSFVGPIA 84 (161)
T ss_pred HHHhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhcC--------ceEEEEeCCEEEcCCCcEECchH
Confidence 34456667788777788888999999888 8888888888888887653 67888888844 33566
Q ss_pred HHHHHhhCCCCeeecCcCccccccccc
Q 013850 326 MEDCQKNIPGATIFQGYGMTETCAPIS 352 (435)
Q Consensus 326 ~~~~~~~~~~~~~~~~yG~tE~~~~~~ 352 (435)
.+.+++...+.-++..-|..+-.++..
T Consensus 85 ~~~l~~~~~d~afi~~~gi~~~~G~~~ 111 (161)
T PF00455_consen 85 LEALRQFRFDKAFIGADGISEEGGLTT 111 (161)
T ss_pred HHHHHhhccceEEecccEecCCCcccc
Confidence 677776666677777777776444443
No 261
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=42.54 E-value=42 Score=31.05 Aligned_cols=52 Identities=17% Similarity=0.278 Sum_probs=41.8
Q ss_pred ceeHHHHHHH------HHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 54 SLSFSQFKSI------VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 54 ~~Ty~el~~~------~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
.+.|.++... ...+...+.++|+.+++.|.++|..+.....+++++-.+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4666665432 466777788889999999999999998888889999999974
No 262
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=42.43 E-value=1.6e+02 Score=27.98 Aligned_cols=90 Identities=12% Similarity=0.044 Sum_probs=55.3
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.++.+..-||++ +-+......+.+.+..+ -.+....+-....+.++|.+.|..+..+-|...+......
T Consensus 15 ~~i~~K~E~~~ptgS~K~--R~a~~~i~~~~~~~~~~---~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 89 (380)
T TIGR01127 15 SEVYLKLENLQKTGSFKI--RGALNKIANLSEDQRQR---GVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKA 89 (380)
T ss_pred CeEEEEecCCCCCCCcHH--HHHHHHHHhcchhccCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHH
Confidence 355555554344556665 22222222233333322 2455555667778888999999866666666666666778
Q ss_pred HHhcCCeEEEEcccc
Q 013850 122 VKDSNPKLVITVPEL 136 (435)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (435)
++..+++++++....
T Consensus 90 ~~~~GA~V~~~~~~~ 104 (380)
T TIGR01127 90 TKSYGAEVILHGDDY 104 (380)
T ss_pred HHHCCCEEEEECCCH
Confidence 899999999997643
No 263
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=42.39 E-value=36 Score=32.93 Aligned_cols=73 Identities=21% Similarity=0.295 Sum_probs=53.3
Q ss_pred HHHHHHhCCCCCCCEEEEEcC-CCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHH
Q 013850 67 VSHSFRHLGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDK 139 (435)
Q Consensus 67 la~~L~~~g~~~gd~V~l~~~-~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 139 (435)
+++.+.-.|..+...|.+.-| -++..+.+=+-=+...+..+|++..+.-+.+..+++..+|++++|.+...+.
T Consensus 406 v~h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeaytqp 479 (653)
T KOG1138|consen 406 VVHFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYTQP 479 (653)
T ss_pred HHHHHHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhcCC
Confidence 345555567766666666665 3455555545555677889999999999999999999999999998766543
No 264
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=42.17 E-value=22 Score=24.21 Aligned_cols=20 Identities=30% Similarity=0.479 Sum_probs=12.7
Q ss_pred HHHHHHHHhCCCCCCCEEEE
Q 013850 65 IKVSHSFRHLGITKKDVVLI 84 (435)
Q Consensus 65 ~~la~~L~~~g~~~gd~V~l 84 (435)
..+-..|++.|+++||.|-|
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 43 MGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp TTHHHHHHTTT--TT-EEEE
T ss_pred CCHHHHHHHcCCCCCCEEEE
Confidence 34456788889999998876
No 265
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=42.08 E-value=2e+02 Score=24.81 Aligned_cols=81 Identities=17% Similarity=0.187 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEEEecHHH------HHHHHhcccccCCCCcceeEEEe
Q 013850 244 MFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPI------ILALAKNSLVRKFDISSLKLVGS 316 (435)
Q Consensus 244 l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~------~~~l~~~~~~~~~~l~~lr~i~~ 316 (435)
-.|..|........-..|..++... +..++.+.+.+.++++.++.++-.+ +..+++.....+ + .++ +++
T Consensus 99 d~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~--~-~~~-i~v 174 (213)
T cd02069 99 DVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG--I-KIP-LLI 174 (213)
T ss_pred chhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC--C-CCe-EEE
Confidence 5677777655555556788887775 5689999999999999887665332 222333222222 1 333 677
Q ss_pred cCCCCcHHHHHH
Q 013850 317 GAAPLGKELMED 328 (435)
Q Consensus 317 gG~~l~~~~~~~ 328 (435)
||.+++.+..+.
T Consensus 175 GG~~~~~~~~~~ 186 (213)
T cd02069 175 GGAATSRKHTAV 186 (213)
T ss_pred EChhcCHHHHhh
Confidence 888888887765
No 266
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=41.99 E-value=2.9e+02 Score=28.22 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=67.4
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~- 267 (435)
.++.++++... ..+| ..-.+|.+.+...+..++..+.-.+ ..+|++...++..--.-. .++.++..|+..+..
T Consensus 66 ~p~~~A~~~~~-~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALIAVS-TETD--EERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAF--AMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEEEEc-CCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeC
Confidence 46777766532 2222 2346899999888777766554332 234888888877654433 678888999988766
Q ss_pred CCCCHHHHHHHHHhcCceEEEecH
Q 013850 268 GKFDIEMALRAIEKYRVTVWWVVP 291 (435)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P 291 (435)
+.+....+...+++.++.++++..
T Consensus 141 ~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 141 GGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcc
Confidence 567889999999999999888754
No 267
>PLN02356 phosphateglycerate kinase
Probab=41.77 E-value=1.6e+02 Score=28.44 Aligned_cols=89 Identities=12% Similarity=-0.040 Sum_probs=53.8
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
++.+-.+..+..=||++ |-+..+-..+.+.|. ++|..|. ....+-.-..+.++|...|.-++.+-|.....+....
T Consensus 69 ~v~~KlE~~nPtGS~Kd--R~A~~~i~~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ 145 (423)
T PLN02356 69 EILGKCEFLNPGGSVKD--RVAVKIIEEALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQI 145 (423)
T ss_pred EEEEEeccCCCCCCHHH--HHHHHHHHHHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHH
Confidence 34444443334445553 222333333334344 3676554 3444455777788889999866666666555666788
Q ss_pred HHhcCCeEEEEcc
Q 013850 122 VKDSNPKLVITVP 134 (435)
Q Consensus 122 l~~~~~~~vi~~~ 134 (435)
++..++++++++.
T Consensus 146 ir~~GAeVi~v~~ 158 (423)
T PLN02356 146 LEALGATVERVRP 158 (423)
T ss_pred HHHcCCEEEEECC
Confidence 9999999999853
No 268
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=41.32 E-value=2.1e+02 Score=28.51 Aligned_cols=97 Identities=12% Similarity=0.075 Sum_probs=65.6
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~ 268 (435)
.|+.++++.... +..+|+..+...+..+...+.-.+. .++++...++-..-+- ..++.++..|+..+..+
T Consensus 41 ~p~~~a~~~~~~-------~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 41 YADKVAFVEAVT-------GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG--IVALGIMAAGGVFSGAN 111 (546)
T ss_pred CCCccEEEecCC-------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEeccCC
Confidence 466777653221 2468999998887777665544332 2377777766555433 36788899999888664
Q ss_pred -CCCHHHHHHHHHhcCceEEEecHHHHH
Q 013850 269 -KFDIEMALRAIEKYRVTVWWVVPPIIL 295 (435)
Q Consensus 269 -~~~~~~~~~~l~~~~~t~~~~~P~~~~ 295 (435)
......+...+++.++.++...+..+.
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~ 139 (546)
T PLN02330 112 PTALESEIKKQAEAAGAKLIVTNDTNYG 139 (546)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEccchhh
Confidence 456788999999999988877665443
No 269
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=40.82 E-value=14 Score=16.93 Aligned_cols=10 Identities=50% Similarity=0.893 Sum_probs=7.1
Q ss_pred CcCccccccc
Q 013850 341 GYGMTETCAP 350 (435)
Q Consensus 341 ~yG~tE~~~~ 350 (435)
+||+|++.+.
T Consensus 1 GYGSTqTA~~ 10 (16)
T PF00818_consen 1 GYGSTQTAGE 10 (16)
T ss_pred CCCcccccCC
Confidence 5898887653
No 270
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=40.62 E-value=2.2e+02 Score=29.52 Aligned_cols=99 Identities=19% Similarity=0.234 Sum_probs=65.6
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHh--CCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEe
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRH--LGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIAST 108 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~--~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~ 108 (435)
.|+.+|.+.-.+| ..+|++.+...+..+...... .++.++|++..++|-+ .+..+. +.++..|+..+.
T Consensus 218 ~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~-~~~l~~G~~i~~ 296 (660)
T PLN02430 218 KPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIE-EYFFRKGASVGY 296 (660)
T ss_pred CcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHH-HHHHHcCCEEEE
Confidence 4667777643322 578998887766655443322 2577899888888764 333333 345677887665
Q ss_pred cCCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 109 ANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 109 i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
... +...+...++..+|.+++..+..++.+.
T Consensus 297 ~~~--~~~~l~~~l~~~~pt~~~~vP~~~~~l~ 327 (660)
T PLN02430 297 YHG--DLNALRDDLMELKPTLLAGVPRVFERIH 327 (660)
T ss_pred eCC--ChhhHHHHHHHhCCcEEEecHHHHHHHH
Confidence 433 4567888889999999999887776554
No 271
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=39.88 E-value=37 Score=23.14 Aligned_cols=19 Identities=32% Similarity=0.373 Sum_probs=15.1
Q ss_pred HHHHHHhCCCCCCCEEEEE
Q 013850 67 VSHSFRHLGITKKDVVLIF 85 (435)
Q Consensus 67 la~~L~~~g~~~gd~V~l~ 85 (435)
+-..|+++|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 3456788899999998774
No 272
>PRK12483 threonine dehydratase; Reviewed
Probab=39.86 E-value=2e+02 Score=28.74 Aligned_cols=91 Identities=18% Similarity=0.136 Sum_probs=55.2
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l 122 (435)
++.+-.++....-||++ .-..+++.+...+. ..+| .+....+-....+.++|..+|..+..+=|...+..-...+
T Consensus 53 ~IylK~E~lqptGSfK~-RGA~n~i~~l~~~~-~~~G---VV~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~ 127 (521)
T PRK12483 53 QVLLKREDLQPVFSFKI-RGAYNKMARLPAEQ-LARG---VITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGV 127 (521)
T ss_pred EEEEEEcCCCCCCchHH-HHHHHHHHHhHHHH-hcCc---EEEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHH
Confidence 45554444334456644 22223333322221 2334 3555556777888899999998666655665555556778
Q ss_pred HhcCCeEEEEccccHH
Q 013850 123 KDSNPKLVITVPELWD 138 (435)
Q Consensus 123 ~~~~~~~vi~~~~~~~ 138 (435)
+..+++++++...+.+
T Consensus 128 r~~GAeVil~g~~~d~ 143 (521)
T PRK12483 128 RAHGGEVVLHGESFPD 143 (521)
T ss_pred HHCCCEEEEECCCHHH
Confidence 9999999999865443
No 273
>PRK07798 acyl-CoA synthetase; Validated
Probab=39.85 E-value=3.8e+02 Score=26.39 Aligned_cols=86 Identities=6% Similarity=-0.106 Sum_probs=58.7
Q ss_pred eeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEE
Q 013850 210 VILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 287 (435)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~ 287 (435)
-.+|...+...+..++..+.-.+. .++++....+-... +...++.++..|+..+..+ ......+...+++.++..+
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 104 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIE--YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVAL 104 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEE
Confidence 358888887777776655443222 23666666544432 2236778888999888774 5678889999999999999
Q ss_pred EecHHHHHHH
Q 013850 288 WVVPPIILAL 297 (435)
Q Consensus 288 ~~~P~~~~~l 297 (435)
+........+
T Consensus 105 ~~~~~~~~~~ 114 (533)
T PRK07798 105 VYEREFAPRV 114 (533)
T ss_pred EEchhhHHHH
Confidence 8877655444
No 274
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=39.76 E-value=2.1e+02 Score=28.68 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=61.3
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCCCCcHH---HHHHHHHHcCcEEEe
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFP---ICFLGVIAIGAIAST 108 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g-~~~gd~V~l~~~~~~~~~---~~~lA~~~~G~~~v~ 108 (435)
.++.++++...+| ..+|+..+...+......+...+ +.+++.+.+......+.. ...+..+..|...+.
T Consensus 206 ~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 285 (560)
T PRK08751 206 EPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHL 285 (560)
T ss_pred CcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEE
Confidence 3466666544333 46788888877777666654333 667776655433322211 123444555655444
Q ss_pred cCCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 109 ANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 109 i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
+........+...+++.++.++...+..+..+.
T Consensus 286 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 318 (560)
T PRK08751 286 ISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLL 318 (560)
T ss_pred ecCcCCHHHHHHHHHhcceeEecChHHHHHHHH
Confidence 444456677888899999998888776665544
No 275
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=39.39 E-value=2.4e+02 Score=23.92 Aligned_cols=82 Identities=12% Similarity=0.011 Sum_probs=52.8
Q ss_pred cceeHHHHHHHHHHHHHHH-------HhCCCCCCCEEEEEcCCCC----cHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 53 ESLSFSQFKSIVIKVSHSF-------RHLGITKKDVVLIFAPNSI----HFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L-------~~~g~~~gd~V~l~~~~~~----~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
..++..|..-.++.+-..| .......+.+|.+.+..+- ...++...+-..|.-++-+..+.+.+++...
T Consensus 49 ~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~ 128 (201)
T cd02070 49 GEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEA 128 (201)
T ss_pred CCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 4566666555444433322 2212222446666665542 2333444455679999999999999999999
Q ss_pred HHhcCCeEEEEcc
Q 013850 122 VKDSNPKLVITVP 134 (435)
Q Consensus 122 l~~~~~~~vi~~~ 134 (435)
+.+.+|++|..+.
T Consensus 129 ~~~~~~d~v~lS~ 141 (201)
T cd02070 129 VKEHKPDILGLSA 141 (201)
T ss_pred HHHcCCCEEEEec
Confidence 9999999998774
No 276
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=39.34 E-value=85 Score=26.32 Aligned_cols=59 Identities=10% Similarity=0.075 Sum_probs=41.3
Q ss_pred CchHHHHHhhcccCCCceeeeecCCC--cceeHH--HHHHHHHHHHHHHHhCCCCCCCEEEEEc
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSD--ESLSFS--QFKSIVIKVSHSFRHLGITKKDVVLIFA 86 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~--el~~~~~~la~~L~~~g~~~gd~V~l~~ 86 (435)
....+.+.+..+++|....++.+..+ ..-.|. ==.++++.++.+|.+.|+.++ +|.+..
T Consensus 99 ~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~G 161 (190)
T COG2885 99 QATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTVG 161 (190)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEEE
Confidence 45566667777899988777766433 223333 356789999999999998887 666654
No 277
>PRK07514 malonyl-CoA synthase; Validated
Probab=39.16 E-value=3.5e+02 Score=26.48 Aligned_cols=87 Identities=14% Similarity=0.081 Sum_probs=61.2
Q ss_pred ceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceE
Q 013850 209 GVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTV 286 (435)
Q Consensus 209 ~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~ 286 (435)
+..+|...+...+......+.-.+ ..++++....+-.. .....++.++..|+..+..+ ......+...+++.++..
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 346888888777777665544332 23377777766553 23346788899999888774 567889999999999999
Q ss_pred EEecHHHHHHH
Q 013850 287 WWVVPPIILAL 297 (435)
Q Consensus 287 ~~~~P~~~~~l 297 (435)
+...+.....+
T Consensus 104 ii~~~~~~~~~ 114 (504)
T PRK07514 104 VVCDPANFAWL 114 (504)
T ss_pred EEEccchhHHH
Confidence 98877655443
No 278
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.06 E-value=4.4e+02 Score=26.92 Aligned_cols=103 Identities=14% Similarity=0.128 Sum_probs=66.3
Q ss_pred CCCCEEEEEeC--CCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec
Q 013850 190 KQTDAAALLYS--SGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (435)
Q Consensus 190 ~~~~~~~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~ 267 (435)
.++.++++... ++..|. ...+|++.+...+..++..+......+|++...++-..-+- ..++.++..|+..+..
T Consensus 34 ~~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~~--~~~lA~~~~G~v~vpl 109 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDYL--IAFFGALYAGRIAVPL 109 (631)
T ss_pred CCCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHHH--HHHHHHHHcCCEEEee
Confidence 35666665432 112221 34589999988887776655433344488877776664333 3678889999987755
Q ss_pred -CCCC---HHHHHHHHHhcCceEEEecHHHHHH
Q 013850 268 -GKFD---IEMALRAIEKYRVTVWWVVPPIILA 296 (435)
Q Consensus 268 -~~~~---~~~~~~~l~~~~~t~~~~~P~~~~~ 296 (435)
+... ...+...+++.++..+.........
T Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 142 (631)
T PRK07769 110 FDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEG 142 (631)
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEEChHHHHH
Confidence 2222 4678888999999998888765443
No 279
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=39.04 E-value=1.6e+02 Score=22.32 Aligned_cols=41 Identities=10% Similarity=-0.004 Sum_probs=33.4
Q ss_pred HHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc
Q 013850 94 ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 94 ~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (435)
+....+-..|..++.+.+..+.+++...+.+.+|++|..+.
T Consensus 18 ~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 18 IVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 33344445799999999999999999999999999998874
No 280
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=38.95 E-value=1.8e+02 Score=29.21 Aligned_cols=100 Identities=11% Similarity=0.177 Sum_probs=62.3
Q ss_pred CceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCC------CCCCCEEEEEcCCC---CcHHHHHHHHHHcCcE
Q 013850 42 SKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLG------ITKKDVVLIFAPNS---IHFPICFLGVIAIGAI 105 (435)
Q Consensus 42 ~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g------~~~gd~V~l~~~~~---~~~~~~~lA~~~~G~~ 105 (435)
+.+|++...+| ..+|++.+...+..+...+...+ +..++.+.+..-.- ..+....+.++..|..
T Consensus 207 ~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~ 286 (562)
T PRK12492 207 DDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNH 286 (562)
T ss_pred CCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCce
Confidence 45666543323 46789999888888877775433 45666554442222 2222334555667776
Q ss_pred EEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 106 ~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
.+.+........+...+++.++.+++..+..+..+.
T Consensus 287 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 322 (562)
T PRK12492 287 NVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALM 322 (562)
T ss_pred EEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHH
Confidence 655544456677778889999999998877665543
No 281
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=38.67 E-value=1e+02 Score=23.30 Aligned_cols=40 Identities=15% Similarity=0.309 Sum_probs=30.6
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCC-CCcHHHHHHHHHHcCcE
Q 013850 66 KVSHSFRHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAI 105 (435)
Q Consensus 66 ~la~~L~~~g~~~gd~V~l~~~~-~~~~~~~~lA~~~~G~~ 105 (435)
.+.+.+.+.++.+++.|.++|.. +.....+...+...|..
T Consensus 66 ~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 66 EFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 34455666788899999999998 47777777778888864
No 282
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=38.66 E-value=1.8e+02 Score=28.95 Aligned_cols=90 Identities=14% Similarity=0.123 Sum_probs=55.0
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.++....-||+. .-..+++++.-.+.+ .+| .+....+-....+.++|.++|..++.+-|...+......
T Consensus 32 ~~i~lK~E~lqptgSfK~-RgA~n~i~~l~~~~~-~~g---VV~aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv~~ 106 (499)
T TIGR01124 32 NRILIKREDLQPVFSFKL-RGAYNKMAQLSPEQK-ARG---VIAASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDA 106 (499)
T ss_pred CEEEEEecCCCCCCCCHH-HHHHHHHHHhhHHhc-CCE---EEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 456665555445557766 222233333222221 222 344556667777888999999866666666655555678
Q ss_pred HHhcCCeEEEEcccc
Q 013850 122 VKDSNPKLVITVPEL 136 (435)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (435)
++..+++++++....
T Consensus 107 ~r~~GA~Vvl~g~~~ 121 (499)
T TIGR01124 107 VRGFGGEVVLHGANF 121 (499)
T ss_pred HHhCCCEEEEeCcCH
Confidence 899999999997654
No 283
>PRK05939 hypothetical protein; Provisional
Probab=38.47 E-value=1.5e+02 Score=28.32 Aligned_cols=56 Identities=11% Similarity=0.115 Sum_probs=24.8
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEc
Q 013850 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 76 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~ 133 (435)
+++||.|++.-..-......+.++-+.|+.+..++.. +.+.++..++. +.++|+++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
Confidence 4566665543221112222223344556655555442 34455554432 45555553
No 284
>PRK13391 acyl-CoA synthetase; Provisional
Probab=38.42 E-value=4e+02 Score=26.23 Aligned_cols=98 Identities=9% Similarity=0.046 Sum_probs=67.0
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~ 268 (435)
.|+.++++...++ -.+|...+...+..+...+.-... .++++....+-..-.- ..++.++..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~--~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYL--EVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhccEEeccc
Confidence 4667776655432 248888887777776655443322 2367766665554332 35778899999998774
Q ss_pred -CCCHHHHHHHHHhcCceEEEecHHHHHH
Q 013850 269 -KFDIEMALRAIEKYRVTVWWVVPPIILA 296 (435)
Q Consensus 269 -~~~~~~~~~~l~~~~~t~~~~~P~~~~~ 296 (435)
......+...+++.++..+...+.....
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 5678999999999999999888765543
No 285
>PRK07591 threonine synthase; Validated
Probab=38.19 E-value=3.8e+02 Score=25.93 Aligned_cols=88 Identities=16% Similarity=0.069 Sum_probs=54.9
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l 122 (435)
++.+-.+..+..-||++-.. ...++. +++.|. +.| +....+-.-..+..+|.++|..++.+-|......-...+
T Consensus 106 ~l~~K~E~~nPtGSfKdRga-~~~v~~-A~~~g~---~~v-v~aSsGN~g~alA~~aa~~Gl~~~I~vP~~~~~~k~~~~ 179 (421)
T PRK07591 106 NLYIKDDSVNPTHSFKDRVV-SVALTA-ARELGF---TTV-ACASTGNLANSVAAHAARAGLDSCVFIPADLEAGKIVGT 179 (421)
T ss_pred cEEEEeCCCCCccChHHHHH-HHHHHH-HHHcCC---CEE-EEeCCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHH
Confidence 56666665456678877322 222222 334453 345 455666677777788888998555555554444455667
Q ss_pred HhcCCeEEEEcccc
Q 013850 123 KDSNPKLVITVPEL 136 (435)
Q Consensus 123 ~~~~~~~vi~~~~~ 136 (435)
+..++++++++.+.
T Consensus 180 ~~~GA~Vi~v~g~~ 193 (421)
T PRK07591 180 LVYGPTLVAVDGNY 193 (421)
T ss_pred HHcCCEEEEECCCH
Confidence 89999999998754
No 286
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=37.64 E-value=97 Score=25.84 Aligned_cols=47 Identities=6% Similarity=-0.004 Sum_probs=33.5
Q ss_pred CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013850 52 DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (435)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 99 (435)
...+||+|+.+.+.++|..+.+. +.....+.+...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 36899999999999999999863 222233556666666666666653
No 287
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.60 E-value=3.2e+02 Score=27.38 Aligned_cols=95 Identities=13% Similarity=0.059 Sum_probs=66.5
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhh--ccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL--VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~--~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~ 267 (435)
.|+.++++. . +..+|+..+...+..+...+.- .-..++++...++-..-.- ..++.++..|+..+..
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~--~~~la~~~~Ga~~v~l 105 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYP--VAVFGAMRAGLIVVNT 105 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEeec
Confidence 356666653 1 2358999998888877765542 2233488887777655433 3678889999999877
Q ss_pred C-CCCHHHHHHHHHhcCceEEEecHHHHH
Q 013850 268 G-KFDIEMALRAIEKYRVTVWWVVPPIIL 295 (435)
Q Consensus 268 ~-~~~~~~~~~~l~~~~~t~~~~~P~~~~ 295 (435)
+ .+..+.+...+++.++..+........
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 134 (562)
T PRK05677 106 NPLYTAREMEHQFNDSGAKALVCLANMAH 134 (562)
T ss_pred CCCCCHHHHHHHHhccCceEEEEecchhh
Confidence 4 567899999999999999887655443
No 288
>PRK06382 threonine dehydratase; Provisional
Probab=37.59 E-value=1.8e+02 Score=27.99 Aligned_cols=91 Identities=16% Similarity=0.131 Sum_probs=53.8
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.++.+..=||++=-. ...+. .+.+.+..+| .+....+-....+.++|..+|..+..+-|..........
T Consensus 40 ~~v~~K~E~~nptGSfK~Rga-~~~i~-~~~~~~~~~g---vv~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~ 114 (406)
T PRK06382 40 GDIYFKLENFQKTGSFKSRGA-VFKFS-KLSEDELRNG---VITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNA 114 (406)
T ss_pred CEEEEEecCCCCCCCCHHHHH-HHHHH-hcchhccCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHH
Confidence 345555554344455554222 11222 2322233444 344454666667788899999866666666655566677
Q ss_pred HHhcCCeEEEEccccH
Q 013850 122 VKDSNPKLVITVPELW 137 (435)
Q Consensus 122 l~~~~~~~vi~~~~~~ 137 (435)
++..+++++++.....
T Consensus 115 ~~~~GA~Vv~~~~~~~ 130 (406)
T PRK06382 115 VEAYGAHVILTGRDYD 130 (406)
T ss_pred HHHcCCEEEEECCCHH
Confidence 8999999999987543
No 289
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=37.41 E-value=4.6e+02 Score=26.67 Aligned_cols=104 Identities=15% Similarity=0.085 Sum_probs=69.5
Q ss_pred CCCCEEEEEeC--CCCCCCccceeeccHHHHHHHHHHHhhhhhccCCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec
Q 013850 190 KQTDAAALLYS--SGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (435)
Q Consensus 190 ~~~~~~~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~ 267 (435)
.++.++++... .+++|. ...+|+..+...+..++..+.-....+|++...++-..- +...++.++..|+..+..
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh--HHHHHHHHHHcCceeEec
Confidence 35677765432 112232 346899999888877766554433344888888776653 334678899999988865
Q ss_pred -CC-CC--HHHHHHHHHhcCceEEEecHHHHHHH
Q 013850 268 -GK-FD--IEMALRAIEKYRVTVWWVVPPIILAL 297 (435)
Q Consensus 268 -~~-~~--~~~~~~~l~~~~~t~~~~~P~~~~~l 297 (435)
+. .. ++.+...+++.++.++.+.+..+..+
T Consensus 123 ~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 123 FAPELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 32 22 67888999999999999887665443
No 290
>PRK10717 cysteine synthase A; Provisional
Probab=37.30 E-value=2.3e+02 Score=26.20 Aligned_cols=91 Identities=10% Similarity=-0.010 Sum_probs=56.6
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSK 120 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~ 120 (435)
.++.+-.+..+..-|++. +.+..+...+++.| +++|+.|+ ....+-.-..+.++|.++|..+..+-|....+....
T Consensus 28 ~~i~~K~E~~nptGS~K~--Rga~~~v~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~ 104 (330)
T PRK10717 28 CEILGKAEFLNPGGSVKD--RAALNIIWDAEKRGLLKPGGTIV-EGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKD 104 (330)
T ss_pred CeEEEEeeccCCCCCchH--HHHHHHHHHHHHcCCCCCCCEEE-EeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH
Confidence 345555544344455554 12222222333345 46777654 455566777778888899986666656655566778
Q ss_pred HHHhcCCeEEEEccc
Q 013850 121 QVKDSNPKLVITVPE 135 (435)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (435)
.++..++++++++..
T Consensus 105 ~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 105 LLRALGAELVLVPAA 119 (330)
T ss_pred HHHHcCCEEEEeCCc
Confidence 899999999999853
No 291
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=37.27 E-value=1.2e+02 Score=28.67 Aligned_cols=55 Identities=13% Similarity=0.120 Sum_probs=44.2
Q ss_pred EEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH
Q 013850 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (435)
Q Consensus 84 l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (435)
+++.-+-....+.+|+.++|+.+..+=|...+......++..++.+++.-+...+
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~de 172 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDE 172 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHH
Confidence 4455566778889999999997777778888888888899999999998765443
No 292
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=37.00 E-value=2.9e+02 Score=28.12 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=62.9
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCC--CCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEe
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGIT--KKDVVLIFAPNS--IHFPICFLGVIAIGAIAST 108 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~--~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~ 108 (435)
.++.+|++...+| ..+|++.+...+..+...+ ++. .++++...+|-. ..+...++.++..|++++.
T Consensus 207 ~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~ 283 (614)
T PRK08180 207 GPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF---PFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYI 283 (614)
T ss_pred CcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc---cccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEE
Confidence 4567777644333 5689998887766655544 332 457776666642 3344556677888988876
Q ss_pred cCCCCCH---HHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 109 ANPVYTV---SELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 109 i~~~~~~---~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
.+..... .++...+++.++.+++..+..+..+.
T Consensus 284 ~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~ 319 (614)
T PRK08180 284 DDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLV 319 (614)
T ss_pred eCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHH
Confidence 5533333 34556678899999998877655443
No 293
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=36.94 E-value=2e+02 Score=24.29 Aligned_cols=82 Identities=12% Similarity=0.125 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEEEecHHH------HHHHHhcccccCCCCcceeEEEe
Q 013850 244 MFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPI------ILALAKNSLVRKFDISSLKLVGS 316 (435)
Q Consensus 244 l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~------~~~l~~~~~~~~~~l~~lr~i~~ 316 (435)
-.|..|........-..|-.++.. .+..++.+.+.+++.++.++..+-.+ +..+.+.....+ ..+.+ .+++
T Consensus 95 d~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~-~~~~v-~i~v 172 (197)
T TIGR02370 95 DVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEG-YRDSV-KFMV 172 (197)
T ss_pred chhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcC-CCCCC-EEEE
Confidence 367777765555555567777766 45678999999999999887665432 233333222221 11223 3778
Q ss_pred cCCCCcHHHHH
Q 013850 317 GAAPLGKELME 327 (435)
Q Consensus 317 gG~~l~~~~~~ 327 (435)
||.++.+++.+
T Consensus 173 GG~~~~~~~~~ 183 (197)
T TIGR02370 173 GGAPVTQDWAD 183 (197)
T ss_pred EChhcCHHHHH
Confidence 88888765433
No 294
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=36.91 E-value=1.9e+02 Score=22.18 Aligned_cols=41 Identities=7% Similarity=-0.037 Sum_probs=33.8
Q ss_pred HHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc
Q 013850 94 ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 94 ~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (435)
++...+-..|..++.+.+..+.+++.....+.+|++|..+.
T Consensus 18 ~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 18 VIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 33344555689999999999999999999999999999874
No 295
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=36.75 E-value=26 Score=21.55 Aligned_cols=23 Identities=26% Similarity=0.247 Sum_probs=20.3
Q ss_pred eEEEecCCCCcHHHHHHHHhhCC
Q 013850 312 KLVGSGAAPLGKELMEDCQKNIP 334 (435)
Q Consensus 312 r~i~~gG~~l~~~~~~~~~~~~~ 334 (435)
+++-++|.|++.+....++..|+
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~ 44 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFG 44 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHh
Confidence 56789999999999999988886
No 296
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=36.43 E-value=1.2e+02 Score=22.49 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=34.7
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEe
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAST 108 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 108 (435)
..+.+.++.+ .+.+.+..+++.|.++|.++.....+...+.++|..-+-
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~ 89 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAE 89 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEE
Confidence 4566665543 344445566778999999988888888888889976553
No 297
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=36.02 E-value=2e+02 Score=27.67 Aligned_cols=58 Identities=12% Similarity=0.091 Sum_probs=47.3
Q ss_pred CCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEec--CCCCCHHHHHHHHHhcCCeEEEE
Q 013850 75 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA--NPVYTVSELSKQVKDSNPKLVIT 132 (435)
Q Consensus 75 g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i--~~~~~~~~~~~~l~~~~~~~vi~ 132 (435)
.--+|-+|+.+++-..+..+.+..+..+|+-+... ||....+.+...|...+..++-.
T Consensus 28 ~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~ 87 (406)
T TIGR00936 28 KPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAW 87 (406)
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEe
Confidence 44578899999999999999999999999865544 77778888888888888886653
No 298
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=35.84 E-value=2.2e+02 Score=27.06 Aligned_cols=56 Identities=13% Similarity=0.187 Sum_probs=35.6
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCC--C----CCHHHHHHHHHhc------CCeEEEEcc
Q 013850 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--V----YTVSELSKQVKDS------NPKLVITVP 134 (435)
Q Consensus 76 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~--~----~~~~~~~~~l~~~------~~~~vi~~~ 134 (435)
+++||.|.+.. ..+...+.++...|+.++.++. + .+.+.+...++.. ++++|+++.
T Consensus 99 ~~~gd~Vlv~~---~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~ 166 (387)
T PRK09331 99 CKKGDYVVLDG---LAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTH 166 (387)
T ss_pred cCCCCEEEECC---CchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEEC
Confidence 47889876642 2334445567778887776654 1 4567777777653 677777653
No 299
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=35.71 E-value=4e+02 Score=26.60 Aligned_cols=85 Identities=13% Similarity=0.096 Sum_probs=60.7
Q ss_pred eeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEE
Q 013850 210 VILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 287 (435)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~ 287 (435)
..+|+..+...+..+...+.-.+. .++++...++-..-.-. .++.++..|+..+..+ ......+...+++.+++.+
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~--~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~v 124 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPV--AIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAI 124 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHH--HHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEE
Confidence 468999998887777665443322 33777777665554333 5688889999998774 5678899999999999998
Q ss_pred EecHHHHHH
Q 013850 288 WVVPPIILA 296 (435)
Q Consensus 288 ~~~P~~~~~ 296 (435)
.........
T Consensus 125 i~~~~~~~~ 133 (557)
T PRK07059 125 VVLENFATT 133 (557)
T ss_pred EEchhhHHH
Confidence 887665443
No 300
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=35.65 E-value=1.1e+02 Score=27.61 Aligned_cols=83 Identities=16% Similarity=0.184 Sum_probs=52.4
Q ss_pred CcceeEEEecCCCCc--HHHHHHHHhhCCCCeeecCcCcccccccccccCCCCCCcCCCCcccccCCcEEEEEeCCCCcc
Q 013850 308 ISSLKLVGSGAAPLG--KELMEDCQKNIPGATIFQGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKP 385 (435)
Q Consensus 308 l~~lr~i~~gG~~l~--~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~ 385 (435)
+.+|=+-++|++.=+ .++.+.+|++|| ...-+.|-++++-+.+....+. ...+.+-..--|...+++++ +|..
T Consensus 68 lr~lgL~lSg~d~e~~~~~lv~~~R~~fp-s~ae~~~v~sDa~~sl~a~t~g---~~~GiVLiaGTgs~crl~~~-DGs~ 142 (336)
T KOG1794|consen 68 LRSLGLGLSGTDQEDKNRKLVTEFRDKFP-SVAENFYVTSDADGSLAAATPG---GEGGIVLIAGTGSNCRLVNP-DGSE 142 (336)
T ss_pred cceeeeecccCCchhHHHHHHHHHHHhcc-chhheeeeehhHHHHHhhcCCC---CCCcEEEEecCCceeEEECC-CCCc
Confidence 556656667776544 689999999998 4446688888877665544332 12233333335667788885 6666
Q ss_pred CCCCCceeEE
Q 013850 386 LPPNQLGEIW 395 (435)
Q Consensus 386 ~~~g~~Gei~ 395 (435)
-..|-.|.+.
T Consensus 143 ~~~ggwg~~i 152 (336)
T KOG1794|consen 143 KGAGGWGHMI 152 (336)
T ss_pred cCCCCCCCcc
Confidence 6666666543
No 301
>PRK06178 acyl-CoA synthetase; Validated
Probab=35.43 E-value=3.5e+02 Score=27.11 Aligned_cols=98 Identities=10% Similarity=-0.025 Sum_probs=63.3
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc--HHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.+|++...+| ..+|+..+...+....... ..+.++|++...+|-... +...+++.+..|++.+..+
T Consensus 207 ~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~ 284 (567)
T PRK06178 207 ALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA--VVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA 284 (567)
T ss_pred CCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh--ccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 4566777644333 4678887765544433322 456788888777764321 2234666788898887764
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHH
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
......+...+++.++..+.........+
T Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~~~~~~~l 313 (567)
T PRK06178 285 -RWDAVAFMAAVERYRVTRTVMLVDNAVEL 313 (567)
T ss_pred -CCCHHHHHHHHHHhCCeEEeccHHHHHHH
Confidence 56788888999999999988765544433
No 302
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.69 E-value=2.6e+02 Score=28.08 Aligned_cols=97 Identities=19% Similarity=0.118 Sum_probs=67.0
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~- 267 (435)
.|+.++++.. + -.+|+..+...+...+..+.-.+ ..+|++....+-..-. ...++.++..|+..+..
T Consensus 45 ~p~~~a~~~~--~-------~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~l~ 113 (573)
T PRK05605 45 FGDRPALDFF--G-------ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH--IVAFYAVLRLGAVVVEHN 113 (573)
T ss_pred CCCCeEEEeC--C-------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecC
Confidence 4566666542 1 14788888887777665543322 2337777776655442 23678888999998877
Q ss_pred CCCCHHHHHHHHHhcCceEEEecHHHHHHH
Q 013850 268 GKFDIEMALRAIEKYRVTVWWVVPPIILAL 297 (435)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l 297 (435)
+.+....+...+.+.++..++........+
T Consensus 114 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 114 PLYTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred cCCCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 457899999999999999999877765444
No 303
>PLN02409 serine--glyoxylate aminotransaminase
Probab=33.97 E-value=3.4e+02 Score=25.92 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=13.2
Q ss_pred HHHHHHHHhhCCCCeeecCcCc
Q 013850 323 KELMEDCQKNIPGATIFQGYGM 344 (435)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~yG~ 344 (435)
.++.+.+.+.++ ..+..++|.
T Consensus 320 ~~l~~~l~~~~~-i~i~~G~~~ 340 (401)
T PLN02409 320 AEIVKNAWKKYN-LSLGLGLNK 340 (401)
T ss_pred HHHHHHHHHhCC-EEEEcCCCc
Confidence 456566666664 777767665
No 304
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=33.53 E-value=2.1e+02 Score=25.89 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=35.3
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC----------CCHHHHHHHHHh-cCCeEEEEc
Q 013850 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----------YTVSELSKQVKD-SNPKLVITV 133 (435)
Q Consensus 76 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~----------~~~~~~~~~l~~-~~~~~vi~~ 133 (435)
+++||.|.+.-+. +....-++...|+.++.+.+. .+.+.++..+++ .++++++..
T Consensus 96 ~~~gd~Vlv~~~~---h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNC---HKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCc---hHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5789987776443 333455666788877766543 457778887764 457766554
No 305
>PRK08162 acyl-CoA synthetase; Validated
Probab=33.38 E-value=2.4e+02 Score=28.03 Aligned_cols=85 Identities=12% Similarity=0.049 Sum_probs=62.0
Q ss_pred eeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEEE
Q 013850 211 ILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 288 (435)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~ 288 (435)
.+|...+...+..+...+.-.. ..++++....+-..-+- ..++.++..|+..+..+ ......+...+++.+++.++
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~ 120 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMV--EAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLI 120 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEE
Confidence 5899999888777766554322 23377777776655333 36788888898888774 56889999999999999999
Q ss_pred ecHHHHHHH
Q 013850 289 VVPPIILAL 297 (435)
Q Consensus 289 ~~P~~~~~l 297 (435)
..+.....+
T Consensus 121 ~~~~~~~~~ 129 (545)
T PRK08162 121 VDTEFAEVA 129 (545)
T ss_pred EccchhhHH
Confidence 887665443
No 306
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.36 E-value=4.9e+02 Score=26.03 Aligned_cols=98 Identities=12% Similarity=0.111 Sum_probs=59.5
Q ss_pred CceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc---HHHHHHHHHHcCcEEEecCC
Q 013850 42 SKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH---FPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 42 ~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~---~~~~~lA~~~~G~~~v~i~~ 111 (435)
+..|++...+| ..+|++.+...+......+ .+..+++.+.++...-.+ +...++..+..|+..+..+
T Consensus 206 ~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~- 282 (563)
T PRK06710 206 NDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWL--YNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIP- 282 (563)
T ss_pred CCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhc--cCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcC-
Confidence 55666643333 4578888865433222222 245566655544333222 2233445677888877754
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
..+.+.+...+++.++.++...+..+..+..
T Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 313 (563)
T PRK06710 283 KFDMKMVFEAIKKHKVTLFPGAPTIYIALLN 313 (563)
T ss_pred CCCHHHHHHHHHHcCCeEEeccHHHHHHHHc
Confidence 4577788889999999999988877765543
No 307
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.31 E-value=3.1e+02 Score=26.91 Aligned_cols=86 Identities=13% Similarity=0.069 Sum_probs=60.6
Q ss_pred eeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEE
Q 013850 210 VILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 287 (435)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~ 287 (435)
-.+|...+...+......+.-... .++++....+-+...- ..++.++..|+..+..+ .+....+...+++.++..+
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFF--EVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHH--HHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 347888887777766655443322 2377777766654433 36788899999888774 5678889999999999999
Q ss_pred EecHHHHHHH
Q 013850 288 WVVPPIILAL 297 (435)
Q Consensus 288 ~~~P~~~~~l 297 (435)
...+.....+
T Consensus 88 i~~~~~~~~~ 97 (502)
T PRK08276 88 IVSAALADTA 97 (502)
T ss_pred EEccchhhHH
Confidence 8877665544
No 308
>PRK09088 acyl-CoA synthetase; Validated
Probab=32.77 E-value=4.5e+02 Score=25.62 Aligned_cols=93 Identities=10% Similarity=-0.044 Sum_probs=62.3
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~ 268 (435)
.|+.++++....| ..+|...+...+..+...+.-.. ..++++....+-...+- ..++.++..|+..+..+
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~--~~~la~~~~G~~~v~~~ 78 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLV--ALHFACARVGAIYVPLN 78 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEEeeC
Confidence 4566665443222 35789988887776665444322 22377777666555432 35788888898888774
Q ss_pred -CCCHHHHHHHHHhcCceEEEecH
Q 013850 269 -KFDIEMALRAIEKYRVTVWWVVP 291 (435)
Q Consensus 269 -~~~~~~~~~~l~~~~~t~~~~~P 291 (435)
...+..+...+++.+++.+....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 79 WRLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEcc
Confidence 56788999999999998887654
No 309
>PRK08813 threonine dehydratase; Provisional
Probab=32.75 E-value=3.3e+02 Score=25.62 Aligned_cols=81 Identities=12% Similarity=-0.004 Sum_probs=50.5
Q ss_pred CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEE
Q 013850 52 DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (435)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi 131 (435)
+..-||++--.. ..+.+.. +.|...+ .+....+-.-..+.++|..+|..+..+-|..........++..+++++.
T Consensus 58 nptGSfK~RgA~-~~l~~a~-~~~~~~~---VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~ 132 (349)
T PRK08813 58 QRTGSYKVRGAL-NALLAGL-ERGDERP---VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQ 132 (349)
T ss_pred CCcCCCHHHHHH-HHHHHHH-HcCCCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEE
Confidence 355666653322 2333333 3343322 4556666777788889999998555544555555666777999999999
Q ss_pred EccccH
Q 013850 132 TVPELW 137 (435)
Q Consensus 132 ~~~~~~ 137 (435)
+..++.
T Consensus 133 ~g~~~~ 138 (349)
T PRK08813 133 HGNSYD 138 (349)
T ss_pred ECCCHH
Confidence 976543
No 310
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=32.70 E-value=1.5e+02 Score=21.90 Aligned_cols=49 Identities=10% Similarity=0.100 Sum_probs=35.3
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEe
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAST 108 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 108 (435)
..+.+.++.+. +...+..+...|.++|.++.....+...+..+|..-+-
T Consensus 39 inip~~~l~~~-------l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~G~~~v~ 87 (101)
T TIGR02981 39 INIPLKEIKEH-------IATAVPDKNDTVKLYCNAGRQSGMAKDILLDMGYTHAE 87 (101)
T ss_pred EECCHHHHHHH-------HHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHcCCCeEE
Confidence 45777776543 32333455678999999999998889999999986543
No 311
>PTZ00297 pantothenate kinase; Provisional
Probab=32.34 E-value=1.9e+02 Score=33.10 Aligned_cols=84 Identities=15% Similarity=0.270 Sum_probs=61.2
Q ss_pred CcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeE
Q 013850 52 DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (435)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~ 129 (435)
|..+|++.+...+..++....-.+..++|++..++|=. .+ .++.++++..|+.... .+.+.+...++..+|.+
T Consensus 618 GVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~e-r~~~~~~l~~G~~I~~----~d~~~lledL~~~rPTv 692 (1452)
T PTZ00297 618 VVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFN-RVFVLGLFAHGSAVAT----VDAAHLQRAFVKFQPTI 692 (1452)
T ss_pred EEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHH-HHHHHHHHHcCCEEEe----CCHHHHHHHHHHHCCEE
Confidence 36799999999988876532112356789988888853 34 3466777889987652 35678888999999999
Q ss_pred EEEccccHHHH
Q 013850 130 VITVPELWDKV 140 (435)
Q Consensus 130 vi~~~~~~~~~ 140 (435)
++.-+..++++
T Consensus 693 ~~~VPrv~ekI 703 (1452)
T PTZ00297 693 LVAAPSLFSTS 703 (1452)
T ss_pred EEecHHHHHHH
Confidence 99887655543
No 312
>PRK13383 acyl-CoA synthetase; Provisional
Probab=31.06 E-value=3.5e+02 Score=26.71 Aligned_cols=86 Identities=13% Similarity=0.068 Sum_probs=60.1
Q ss_pred eeccHHHHHHHHHHHhhhhhcc-CCCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEEE
Q 013850 211 ILTHKNFIAASLMISAHQELVG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 288 (435)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~~ 288 (435)
.+|...+...+..+...+.-.. ..++++...++-.-.. ...++.++..|+..+..+ .+..+.+...+++.++..+.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 137 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGF--VTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVV 137 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEE
Confidence 4788888777777665544322 2237777666544322 235678888899988774 56789999999999999999
Q ss_pred ecHHHHHHHH
Q 013850 289 VVPPIILALA 298 (435)
Q Consensus 289 ~~P~~~~~l~ 298 (435)
..+.....+.
T Consensus 138 ~~~~~~~~~~ 147 (516)
T PRK13383 138 ADNEFAERIA 147 (516)
T ss_pred EchhHHHHHH
Confidence 8887665543
No 313
>PRK13382 acyl-CoA synthetase; Provisional
Probab=30.87 E-value=4.3e+02 Score=26.30 Aligned_cols=86 Identities=10% Similarity=0.062 Sum_probs=59.2
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcH-HHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi 131 (435)
..+|+..+...+.. .+...++.++|++....|-...+ +...++.+..|++.++. ...+.+.+...+++.++.++.
T Consensus 214 v~~s~~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~vt~~~ 289 (537)
T PRK13382 214 ARRSGPGGIGTLKA---ILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTR-RRFDPEATLDLIDRHRATGLA 289 (537)
T ss_pred EEeccchHHHHHHH---HHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEEC-CCcCHHHHHHHHHHhCCEEEE
Confidence 45666555444333 33345678899887776654221 23457777788887764 567888899999999999999
Q ss_pred EccccHHHHhh
Q 013850 132 TVPELWDKVKD 142 (435)
Q Consensus 132 ~~~~~~~~~~~ 142 (435)
..+.....+..
T Consensus 290 ~~P~~~~~l~~ 300 (537)
T PRK13382 290 VVPVMFDRIMD 300 (537)
T ss_pred ehHHHHHHHHc
Confidence 99887766543
No 314
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=30.66 E-value=3.4e+02 Score=23.84 Aligned_cols=90 Identities=17% Similarity=0.190 Sum_probs=62.0
Q ss_pred HHhhhhcCcEEEecCCCCHHHHHHHHHhcCceEEEecHHHHHHHHhcccccCCCCcceeEEEecCCC-------CcHHHH
Q 013850 254 LYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAP-------LGKELM 326 (435)
Q Consensus 254 ~~~~l~~G~~i~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~-------l~~~~~ 326 (435)
....+.-|.++++-.+.....+.+.|.+...|++.-.+..+..|... +.++.++.||+. ..+...
T Consensus 87 Aa~lI~~gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~ 158 (240)
T PRK10411 87 ALAWIEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLI 158 (240)
T ss_pred HHHhCCCCCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHH
Confidence 44445567777777766777788888765788888778888777543 356788888853 345566
Q ss_pred HHHHhhCCCCeeecCcCcccccccc
Q 013850 327 EDCQKNIPGATIFQGYGMTETCAPI 351 (435)
Q Consensus 327 ~~~~~~~~~~~~~~~yG~tE~~~~~ 351 (435)
+.+++...+.-++..-|.++.+++.
T Consensus 159 ~~l~~~~~d~afis~~gi~~~~G~~ 183 (240)
T PRK10411 159 SQLKSLEIDLFIFSCEGIDSSGALW 183 (240)
T ss_pred HHHHhcCCCEEEEeceeECCCCCcc
Confidence 6777765678888888877545443
No 315
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=29.82 E-value=1.9e+02 Score=27.79 Aligned_cols=57 Identities=5% Similarity=-0.101 Sum_probs=43.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH
Q 013850 82 VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (435)
Q Consensus 82 V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (435)
-.+....+-.-..+.++|..+|..++.+-|.....+....++..++++++++.+...
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~ 192 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSK 192 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHH
Confidence 455566667778888899999986666666666666777889999999999865443
No 316
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.79 E-value=2e+02 Score=20.13 Aligned_cols=67 Identities=9% Similarity=0.165 Sum_probs=51.2
Q ss_pred cceeHHHHHHHHHHHH---HHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeE
Q 013850 53 ESLSFSQFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la---~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~ 129 (435)
...||+||.+.-+.++ +.|....++..|.|+|+.=++... ..++-+....+.++++.-+++.++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 3678999887766555 456667889999999998777443 34566788889999999999988875
Q ss_pred E
Q 013850 130 V 130 (435)
Q Consensus 130 v 130 (435)
=
T Consensus 77 n 77 (88)
T COG4009 77 N 77 (88)
T ss_pred c
Confidence 3
No 317
>PLN02479 acetate-CoA ligase
Probab=29.74 E-value=5.9e+02 Score=25.56 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=65.5
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~ 268 (435)
.|+.++++. +. ..+|...+...+..++..+.-.+. .+|++....+-.-..- ..++.++..|+..+..+
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~--~~~la~~~~G~v~v~l~ 101 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMY--EAHFGVPMAGAVVNCVN 101 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHH--HHHHHHHhCCcEEEEec
Confidence 466676654 11 257888888888777665543322 3377777776544322 35778888898887774
Q ss_pred -CCCHHHHHHHHHhcCceEEEecHHHH
Q 013850 269 -KFDIEMALRAIEKYRVTVWWVVPPII 294 (435)
Q Consensus 269 -~~~~~~~~~~l~~~~~t~~~~~P~~~ 294 (435)
.+....+...+++.++..++..+..+
T Consensus 102 ~~~~~~~l~~~l~~~~~~~ii~~~~~~ 128 (567)
T PLN02479 102 IRLNAPTIAFLLEHSKSEVVMVDQEFF 128 (567)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhh
Confidence 56789999999999999999877654
No 318
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=29.44 E-value=2.5e+02 Score=26.76 Aligned_cols=25 Identities=12% Similarity=0.100 Sum_probs=11.8
Q ss_pred HHHHHHHhhCCCCeeecCcCccccc
Q 013850 324 ELMEDCQKNIPGATIFQGYGMTETC 348 (435)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~yG~tE~~ 348 (435)
+...+|.+.+.-..+-..+|..|+.
T Consensus 308 ~~~~~f~~~l~~~~~~~s~G~~~sl 332 (382)
T TIGR02080 308 QTVRRFLGGLSLFTLAESLGGVESL 332 (382)
T ss_pred HHHHHHHHcCCcceEeccCCCCcce
Confidence 3334454544323444556666644
No 319
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=29.43 E-value=1.6e+02 Score=20.63 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=30.2
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 66 KVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 66 ~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
.+...+...++.+++.|.+++..+.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 3444555667888999999998888777777777788865
No 320
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=29.34 E-value=2.6e+02 Score=25.64 Aligned_cols=97 Identities=6% Similarity=0.081 Sum_probs=72.0
Q ss_pred CchHHHHHhhcccCCCceeeeecC-------CCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC-CCcHHHHHHH
Q 013850 27 FSMVHFLFRNSASYSSKLALIDAD-------SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN-SIHFPICFLG 98 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~-~~~~~~~~lA 98 (435)
-|+..+++...+..+.++.-+++. ...-+.-+|+.+....++++|+.. ++..--|.++.+- ..|.+-+.|-
T Consensus 140 TTlAamId~iN~~~~~HIlTIEDPIE~vh~skkslI~QREvG~dT~sF~~aLraA-LReDPDVIlvGEmRD~ETi~~ALt 218 (353)
T COG2805 140 TTLAAMIDYINKHKAKHILTIEDPIEYVHESKKSLINQREVGRDTLSFANALRAA-LREDPDVILVGEMRDLETIRLALT 218 (353)
T ss_pred HHHHHHHHHHhccCCcceEEecCchHhhhcchHhhhhHHHhcccHHHHHHHHHHH-hhcCCCEEEEeccccHHHHHHHHH
Confidence 477788888888888877776542 113466788999999999999863 4544446666665 4788888888
Q ss_pred HHHcCc-EEEecCCCCCHHHHHHHHHh
Q 013850 99 VIAIGA-IASTANPVYTVSELSKQVKD 124 (435)
Q Consensus 99 ~~~~G~-~~v~i~~~~~~~~~~~~l~~ 124 (435)
++..|- ++-.++.+...+.+..+++.
T Consensus 219 AAETGHLV~~TLHT~sA~~ti~Riidv 245 (353)
T COG2805 219 AAETGHLVFGTLHTNSAAKTIDRIIDV 245 (353)
T ss_pred HHhcCCEEEEecccccHHHHHHHHHHh
Confidence 888885 77788888888888888873
No 321
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=29.24 E-value=2.6e+02 Score=27.41 Aligned_cols=58 Identities=22% Similarity=0.247 Sum_probs=36.8
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCC---CCCHHHHHHHHHhcCCeEEEEcccc
Q 013850 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP---VYTVSELSKQVKDSNPKLVITVPEL 136 (435)
Q Consensus 76 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~---~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (435)
+++||.|++=-| ++......+ -..|+.+++|+. ....+.++..++..+++++++.+.+
T Consensus 176 ~~pGd~v~vE~P-tY~~~~~~~--~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 176 LDPGDTVLVEDP-TYPGALQAL--EALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCCEEEEcCC-CcHHHHHHH--HHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 357776666444 444443343 444555554443 3367889999998899999998753
No 322
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=29.21 E-value=2.5e+02 Score=26.80 Aligned_cols=27 Identities=11% Similarity=0.073 Sum_probs=14.2
Q ss_pred HHHHHHHHhhCCCCeeecCcCcccccc
Q 013850 323 KELMEDCQKNIPGATIFQGYGMTETCA 349 (435)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~yG~tE~~~ 349 (435)
.+...++.+.+.-..+-..+|.+|+..
T Consensus 310 ~~~~~~~~~~l~l~~~~~s~G~~~sl~ 336 (385)
T PRK08574 310 RDAVLKFLRSLKLIKPSPSLGGVESLA 336 (385)
T ss_pred HHHHHHHHHcCCcceEccCCCCCccee
Confidence 344455555554334455666666543
No 323
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=29.10 E-value=4.2e+02 Score=25.89 Aligned_cols=69 Identities=16% Similarity=0.162 Sum_probs=45.4
Q ss_pred cceeHHHHHHHHHHH--------------H-HHHHhCCCCCCCEEEEEcCCCCcHHHHHHH-HHHcCcEEEec--C----
Q 013850 53 ESLSFSQFKSIVIKV--------------S-HSFRHLGITKKDVVLIFAPNSIHFPICFLG-VIAIGAIASTA--N---- 110 (435)
Q Consensus 53 ~~~Ty~el~~~~~~l--------------a-~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA-~~~~G~~~v~i--~---- 110 (435)
..-||.+|.+.+..+ | +.|...++++||.| + +..++....+ +...|++++=+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV----p-sn~~f~Tt~ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV----P-GNMYFTTTRYHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE----C-CceeHHHHHHHHHhCCeEEEeeecccccc
Confidence 455888888875544 2 33446689999976 3 3555566666 67788876666 2
Q ss_pred --------CCCCHHHHHHHHHhcC
Q 013850 111 --------PVYTVSELSKQVKDSN 126 (435)
Q Consensus 111 --------~~~~~~~~~~~l~~~~ 126 (435)
.+.+.+.++..++...
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 2346788888887543
No 324
>PRK08329 threonine synthase; Validated
Probab=28.93 E-value=4.9e+02 Score=24.37 Aligned_cols=87 Identities=13% Similarity=-0.021 Sum_probs=53.1
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l 122 (435)
++.+-.+..+..-||++= .+..+...+++.|. +.|+.. ..+-.-..+..++.++|..+..+-|......-...+
T Consensus 73 ~l~~K~E~~nPtGSfKdR--ga~~~i~~a~~~g~---~~vv~a-SsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~ 146 (347)
T PRK08329 73 KVYFKLDYLQPTGSFKDR--GTYVTVAKLKEEGI---NEVVID-SSGNAALSLALYSLSEGIKVHVFVSYNASKEKISLL 146 (347)
T ss_pred eEEEEeCCCCCCcCCHHH--HHHHHHHHHHHcCC---CEEEEE-CCCcHHHHHHHHHHHcCCcEEEEECCCChHHHHHHH
Confidence 455555544566777772 22233333444454 344443 345555666677778887555555555555566778
Q ss_pred HhcCCeEEEEccc
Q 013850 123 KDSNPKLVITVPE 135 (435)
Q Consensus 123 ~~~~~~~vi~~~~ 135 (435)
+..++++++++.+
T Consensus 147 ~~~GA~v~~v~~~ 159 (347)
T PRK08329 147 SRLGAELHFVEGD 159 (347)
T ss_pred HHcCCEEEEECCC
Confidence 9999999999765
No 325
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=28.90 E-value=3.3e+02 Score=25.07 Aligned_cols=52 Identities=10% Similarity=-0.015 Sum_probs=38.7
Q ss_pred EcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 013850 85 FAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (435)
Q Consensus 85 ~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (435)
....+-.-..+.++|.++|..++.+-|..........++..++++++++...
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (317)
T TIGR02991 72 AASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQ 123 (317)
T ss_pred EECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCH
Confidence 4445666777788899999866665565555666777899999999998753
No 326
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=28.81 E-value=1.5e+02 Score=24.92 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=27.9
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCC-CCCEEEEEcCCCCcHHHHHH
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGIT-KKDVVLIFAPNSIHFPICFL 97 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~-~gd~V~l~~~~~~~~~~~~l 97 (435)
..+|+.|+.+++.++|..+.+. .+ ..+ |.+...++--.++..|
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~-~~~~~~-vivgi~~Gg~~fa~~L 53 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD-YAGKSP-VVLGVATGAFMFLADL 53 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH-cCCCCc-EEEEEccCCHHHHHHH
Confidence 4689999999999999999764 22 224 4444444433333434
No 327
>PRK13390 acyl-CoA synthetase; Provisional
Probab=28.23 E-value=5.7e+02 Score=24.98 Aligned_cols=94 Identities=13% Similarity=0.074 Sum_probs=63.7
Q ss_pred CCCCEEEEEeCCCCCCCccceeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC
Q 013850 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (435)
Q Consensus 190 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~ 268 (435)
.|+.++++.... | -.+|...+...+..++..+.-.+. .+|++....+-+...- ..++.++..|+..+...
T Consensus 10 ~p~~~a~~~~~~---~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~--~~~la~~~~Ga~~~~l~ 80 (501)
T PRK13390 10 APDRPAVIVAET---G----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEAL--VVLWAALRSGLYITAIN 80 (501)
T ss_pred CCCCcEEEecCC---C----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH--HHHHHHHHhCCEEeccc
Confidence 456666654321 2 358999998888777765544332 3377777766555433 36788899999887664
Q ss_pred -CCCHHHHHHHHHhcCceEEEecHH
Q 013850 269 -KFDIEMALRAIEKYRVTVWWVVPP 292 (435)
Q Consensus 269 -~~~~~~~~~~l~~~~~t~~~~~P~ 292 (435)
.+.+..+...+++.++..+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 81 HHLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred cCCCHHHHHHHHHhcCCcEEEEcch
Confidence 567888888999888888776543
No 328
>PRK08246 threonine dehydratase; Provisional
Probab=28.05 E-value=4.7e+02 Score=24.00 Aligned_cols=58 Identities=14% Similarity=0.069 Sum_probs=41.5
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 013850 78 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (435)
Q Consensus 78 ~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (435)
+++.|.. ...+-.-..+.++|.++|..+..+-|....+.....++..++++++++...
T Consensus 67 ~~~~vv~-aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~ 124 (310)
T PRK08246 67 PAAGVVA-ASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEY 124 (310)
T ss_pred cCCeEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCH
Confidence 4555544 444667777788888999866555555555666778899999999998643
No 329
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=28.00 E-value=3.7e+02 Score=22.70 Aligned_cols=55 Identities=15% Similarity=0.073 Sum_probs=42.2
Q ss_pred CEEEEEcCCC----CcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc
Q 013850 80 DVVLIFAPNS----IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 80 d~V~l~~~~~----~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (435)
.+|.+.+..+ ....++...+-..|.-++.+.++.+.+++...+++.+|++|..+-
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~ 143 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSA 143 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 3566666554 233444445556799999999999999999999999999999874
No 330
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=27.96 E-value=2.1e+02 Score=27.85 Aligned_cols=59 Identities=5% Similarity=-0.138 Sum_probs=44.0
Q ss_pred EEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHH
Q 013850 81 VVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDK 139 (435)
Q Consensus 81 ~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 139 (435)
+-.+....+-.-..+.++|..+|..++.+-|..........++..+++++++..+....
T Consensus 153 ~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a 211 (431)
T TIGR02035 153 YSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVA 211 (431)
T ss_pred ceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 34555666677778888999999866665566666667788899999999998765443
No 331
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=27.94 E-value=1.6e+02 Score=21.09 Aligned_cols=48 Identities=8% Similarity=0.070 Sum_probs=30.0
Q ss_pred ceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 54 SLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 54 ~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
.+.+.++......+.. +.. ..+++.|+++|..+.....+...+..+|.
T Consensus 34 ~ip~~~~~~~~~~~~~-~~~--~~~~~~ivv~c~~g~~s~~~~~~l~~~G~ 81 (96)
T cd01529 34 SIPGAALVLRSQELQA-LEA--PGRATRYVLTCDGSLLARFAAQELLALGG 81 (96)
T ss_pred eCCHHHhcCCHHHHHH-hhc--CCCCCCEEEEeCChHHHHHHHHHHHHcCC
Confidence 4556665544444432 322 35678899999887766666666667776
No 332
>PRK06608 threonine dehydratase; Provisional
Probab=27.93 E-value=4.7e+02 Score=24.37 Aligned_cols=89 Identities=9% Similarity=0.075 Sum_probs=52.0
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.++.+..-||++ ......+.. +.+.|..+ ..| +....+-.-..+.++|.+.|..++.+-|....+.....
T Consensus 38 ~~l~~K~E~~nptGS~K~-R~a~~~v~~-a~~~g~~~-~~v-v~~SsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~ 113 (338)
T PRK06608 38 HEIFFKVESLQKTGAFKV-RGVLNHLLE-LKEQGKLP-DKI-VAYSTGNHGQAVAYASKLFGIKTRIYLPLNTSKVKQQA 113 (338)
T ss_pred CEEEEEeCCCCCCCCcHH-HHHHHHHHH-hhhhcCcC-CeE-EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 356665554445556654 112222332 33334322 233 34445555666668888999866555565555666778
Q ss_pred HHhcCCeEEEEcc
Q 013850 122 VKDSNPKLVITVP 134 (435)
Q Consensus 122 l~~~~~~~vi~~~ 134 (435)
++..++++++++.
T Consensus 114 l~~~GA~V~~~~~ 126 (338)
T PRK06608 114 ALYYGGEVILTNT 126 (338)
T ss_pred HHhCCCEEEEECC
Confidence 8999999999964
No 333
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.88 E-value=4.2e+02 Score=26.47 Aligned_cols=102 Identities=14% Similarity=0.165 Sum_probs=58.0
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--CcHHHHHHHHHHcCcEEEecC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 110 (435)
.++.++++...+| ..+|+..+...+......+....-..++.+...++-. ....+..+.++..|+..+...
T Consensus 204 ~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~ 283 (560)
T PRK08974 204 VPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLIT 283 (560)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEec
Confidence 4566676644333 4678998877665544433322222344444444421 222333455566776644443
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
.......+...+++.++.++...+.....+.
T Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 314 (560)
T PRK08974 284 NPRDIPGFVKELKKYPFTAITGVNTLFNALL 314 (560)
T ss_pred CccCHHHHHHHHHhcCcceEcCcHHHHHHHH
Confidence 3345666777889999999988776665543
No 334
>PRK08638 threonine dehydratase; Validated
Probab=27.70 E-value=3.5e+02 Score=25.17 Aligned_cols=55 Identities=9% Similarity=0.007 Sum_probs=40.2
Q ss_pred EEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccH
Q 013850 83 LIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 137 (435)
Q Consensus 83 ~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 137 (435)
.+....+-.-..+.++|...|.-+..+-|..........++..++++++++....
T Consensus 78 vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 132 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFN 132 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHH
Confidence 3444556667777888899998666666665556667788999999999976543
No 335
>KOG0330 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=27.41 E-value=2.2e+02 Score=27.04 Aligned_cols=75 Identities=11% Similarity=0.097 Sum_probs=48.5
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHh---cCCeEEEEccccHHHHhhcCCCcEEecc
Q 013850 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKD---SNPKLVITVPELWDKVKDLNLPAVLLGS 152 (435)
Q Consensus 77 ~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~---~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 152 (435)
..|..+.|++..+...-...+.+-.+|...+|++..++...-...+++ ...++++|+ +....-.....-.++++.
T Consensus 298 ~~g~s~iVF~~t~~tt~~la~~L~~lg~~a~~LhGqmsq~~Rlg~l~~Fk~~~r~iLv~T-DVaSRGLDip~Vd~VVNy 375 (476)
T KOG0330|consen 298 LAGNSVIVFCNTCNTTRFLALLLRNLGFQAIPLHGQMSQSKRLGALNKFKAGARSILVCT-DVASRGLDIPHVDVVVNY 375 (476)
T ss_pred hcCCcEEEEEeccchHHHHHHHHHhcCcceecccchhhHHHHHHHHHHHhccCCcEEEec-chhcccCCCCCceEEEec
Confidence 345668888888877777778888999999999999998665555553 334455554 444443334333344443
No 336
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=27.36 E-value=3.4e+02 Score=25.38 Aligned_cols=98 Identities=12% Similarity=0.040 Sum_probs=57.8
Q ss_pred cCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHH
Q 013850 39 SYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSEL 118 (435)
Q Consensus 39 ~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~ 118 (435)
+...++.+-.++-...=||+--- .-+++.+ |...+-++.-.|+- ..+-+.--+.+||-++|...+.+=|..++..-
T Consensus 37 ~~g~~v~lK~E~lQ~~gSFK~RG-A~n~i~~-Ls~e~~~~~gViaa--SaGNHaQGvA~aa~~lGi~a~IvMP~~tp~~K 112 (347)
T COG1171 37 RLGAEIYLKRENLQPVGSFKIRG-AYNKLSS-LSEEEERAAGVIAA--SAGNHAQGVAYAAKRLGIKATIVMPETTPKIK 112 (347)
T ss_pred hhCceEEEeeccCcccccchhhh-HHHHHHh-cChhhhhcCceEEe--cCCcHHHHHHHHHHHhCCCEEEEecCCCcHHH
Confidence 35556666555433334444322 3333333 43211122223444 44445556689999999866666677777777
Q ss_pred HHHHHhcCCeEEEEccccHHHH
Q 013850 119 SKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 119 ~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
..-++..++.++++...+.+..
T Consensus 113 v~a~r~~GaeVil~g~~~dda~ 134 (347)
T COG1171 113 VDATRGYGAEVILHGDNFDDAY 134 (347)
T ss_pred HHHHHhcCCEEEEECCCHHHHH
Confidence 7778999999999998765543
No 337
>PRK07503 methionine gamma-lyase; Provisional
Probab=27.21 E-value=3.1e+02 Score=26.27 Aligned_cols=54 Identities=13% Similarity=0.182 Sum_probs=24.7
Q ss_pred CCCCCEEEEEcCCCCcHH--HHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEE
Q 013850 76 ITKKDVVLIFAPNSIHFP--ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 132 (435)
Q Consensus 76 ~~~gd~V~l~~~~~~~~~--~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~ 132 (435)
+++||.|++..+ .+... ....++-..|+.+..++.. ..+++...++. ++++|++
T Consensus 101 l~~Gd~Viv~~~-~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~~i~~-~tklV~l 156 (403)
T PRK07503 101 LRPGDEVIVDQT-LYGCTFAFLHHGLGEFGVTVRHVDLT-DPAALKAAISD-KTRMVYF 156 (403)
T ss_pred cCCCCEEEEccC-ccchHHHHHHHHHhhCCEEEEEeCCC-CHHHHHHhcCc-cCcEEEE
Confidence 566776655332 22111 1112334456666555443 34455554433 4555554
No 338
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=27.16 E-value=2.1e+02 Score=26.42 Aligned_cols=89 Identities=11% Similarity=-0.026 Sum_probs=53.9
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.++.+..-||++- .+..+...+.+.| ++.|... ..+-.-..+.++|...|..+..+-|..........
T Consensus 38 ~~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g---~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 111 (324)
T cd01563 38 KNLYVKDEGLNPTGSFKDR--GMTVAVSKAKELG---VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQ 111 (324)
T ss_pred CceEEEecCCCCcccHHHh--hHHHHHHHHHHcC---CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHH
Confidence 3566666554555666642 2333333344434 4455444 34445555667888899866555555445556778
Q ss_pred HHhcCCeEEEEcccc
Q 013850 122 VKDSNPKLVITVPEL 136 (435)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (435)
++..++++++++...
T Consensus 112 l~~~GA~Vi~~~~~~ 126 (324)
T cd01563 112 ALAYGATVLAVEGNF 126 (324)
T ss_pred HHHcCCEEEEECCcH
Confidence 899999999998654
No 339
>PRK02991 D-serine dehydratase; Provisional
Probab=26.93 E-value=6e+02 Score=24.80 Aligned_cols=57 Identities=5% Similarity=-0.145 Sum_probs=41.5
Q ss_pred EEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH
Q 013850 82 VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (435)
Q Consensus 82 V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (435)
..+....+-.-..+.+++..+|..+..+-|..........++..++++++++.....
T Consensus 159 ~VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~~ 215 (441)
T PRK02991 159 SIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYGV 215 (441)
T ss_pred EEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 445556666777788899999985555555555566667789999999999876443
No 340
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=26.83 E-value=2.3e+02 Score=19.93 Aligned_cols=48 Identities=6% Similarity=0.109 Sum_probs=31.4
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEec
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA 109 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i 109 (435)
..+++.++..... .+.++++|.++|.++.....+...+.++|..+..+
T Consensus 34 ~~ip~~~~~~~~~---------~~~~~~~vvl~c~~g~~a~~~a~~L~~~G~~v~~l 81 (90)
T cd01524 34 INIPLDELRDRLN---------ELPKDKEIIVYCAVGLRGYIAARILTQNGFKVKNL 81 (90)
T ss_pred EeCCHHHHHHHHH---------hcCCCCcEEEEcCCChhHHHHHHHHHHCCCCEEEe
Confidence 4667766554322 24667889999998766666666777788743333
No 341
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=26.53 E-value=2.7e+02 Score=25.29 Aligned_cols=90 Identities=13% Similarity=0.074 Sum_probs=53.1
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.++.+..-|+++... ...+. .+.+.| +++.|+. ...+-.-..+..+|.+.|.-++.+-|..........
T Consensus 32 ~~i~~K~E~~nptgS~Kdr~a-~~~l~-~~~~~~--~~~~iv~-~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 106 (304)
T cd01562 32 AEVYLKCENLQKTGSFKIRGA-YNKLL-SLSEEE--RAKGVVA-ASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDA 106 (304)
T ss_pred CeEEEEeccCCCcCCcHHHhH-HHHHH-hcCHhh--cCCcEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 456666555444556654332 11121 222223 2333433 455666777778888899855555555555556778
Q ss_pred HHhcCCeEEEEcccc
Q 013850 122 VKDSNPKLVITVPEL 136 (435)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (435)
++..++++++++.+.
T Consensus 107 l~~~Ga~vi~~~~~~ 121 (304)
T cd01562 107 TRAYGAEVVLYGEDF 121 (304)
T ss_pred HHHcCCEEEEeCCCH
Confidence 999999999998753
No 342
>PRK05638 threonine synthase; Validated
Probab=26.25 E-value=2.1e+02 Score=27.87 Aligned_cols=91 Identities=13% Similarity=0.012 Sum_probs=55.0
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.+..+..-||++=... ..+...+ +.| .+.| ++...+-.-..+...+.++|..+..+-|......-...
T Consensus 80 ~~l~~K~E~~nPtGSfKdR~a~-~~i~~a~-~~g---~~~v-v~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~ 153 (442)
T PRK05638 80 ENVYIKDETRNPTGSFRDRLAT-VAVSYGL-PYA---ANGF-IVASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQ 153 (442)
T ss_pred CeEEEEeCCCCCCCChHHHHHH-HHHHHHH-HcC---CCEE-EEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHH
Confidence 3566655555567788873221 2233333 323 2334 44555666666677778889855555555445555678
Q ss_pred HHhcCCeEEEEccccHH
Q 013850 122 VKDSNPKLVITVPELWD 138 (435)
Q Consensus 122 l~~~~~~~vi~~~~~~~ 138 (435)
++..+++++.++.+...
T Consensus 154 ~~~~GA~vi~v~~~~~~ 170 (442)
T PRK05638 154 MIAFGAKIIRYGESVDE 170 (442)
T ss_pred HHhcCcEEEEECCCHHH
Confidence 89999999999865443
No 343
>TIGR01415 trpB_rel pyridoxal-phosphate dependent TrpB-like enzyme. This model represents a family of pyridoxal-phosphate dependent enzyme (pfam00291) closely related to the beta subunit of tryptophan synthase (TIGR00263). However, the only case in which a member of this family replaces a member of TIGR00263 is in Sulfolobus species which contain two sequences which hit this model, one of which is proximal to the alpha subunit. In every other case so far, either the species appears not to make tryptophan (there is no trp synthase alpha subunit), or a trp synthase beta subunit matching TIGR00263 is also found.
Probab=25.99 E-value=6.1e+02 Score=24.55 Aligned_cols=91 Identities=7% Similarity=-0.101 Sum_probs=53.5
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCC---HHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT---VSELS 119 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~---~~~~~ 119 (435)
++.+-.+..+..=|++. +.+...+...++.|.. ++.+....+-.-..+.++|...|.-+..+-|..+ .....
T Consensus 86 ~Iy~K~E~~nPtGS~K~--R~A~~~~~~a~~~G~~---~~vtetssGN~G~alA~aaa~~Gl~~~V~mp~~s~~~k~~k~ 160 (419)
T TIGR01415 86 RIYYKYESVSPTGSHKI--NTAIAQAYYAKIEGAK---RLVTETGAGQWGSALSLAGALFGLECKVFMVRVSFNQKPYRK 160 (419)
T ss_pred eEEEEECCCCCCCCcHH--HHHHHHHHHHHHcCCC---eEEEecCchHHHHHHHHHHHHcCCcEEEEEeCCCcccCHHHH
Confidence 44554443334456663 3344444445565643 4554444455567778889999975544434322 22445
Q ss_pred HHHHhcCCeEEEEccccHH
Q 013850 120 KQVKDSNPKLVITVPELWD 138 (435)
Q Consensus 120 ~~l~~~~~~~vi~~~~~~~ 138 (435)
..++..+++++.++.+..+
T Consensus 161 ~~m~~~GA~Vi~~~~~~~~ 179 (419)
T TIGR01415 161 YLMELYGAEVIPSPSEFTE 179 (419)
T ss_pred HHHHHcCCEEEEECCchhh
Confidence 7889999999999876443
No 344
>PRK06721 threonine synthase; Reviewed
Probab=25.71 E-value=2.5e+02 Score=26.39 Aligned_cols=90 Identities=11% Similarity=0.014 Sum_probs=52.2
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCC-CHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY-TVSELSK 120 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~-~~~~~~~ 120 (435)
.++.+-.+..+..=||++-... ..+.. .++.|. +.| +....+-.-..+..+|...|..++.+-|.. .......
T Consensus 43 ~~i~~K~E~~nptGS~KdR~a~-~~i~~-a~~~g~---~~v-V~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~ 116 (352)
T PRK06721 43 IQLYGKYEGANPTGSFKDRGMV-MAVAK-AKEEGS---EAI-ICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLA 116 (352)
T ss_pred CeEEEEecCCCCccchHHHHHH-HHHHH-HHHCCC---CEE-EEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHH
Confidence 3566655543445566653322 12222 334442 333 334445555677778889998666665653 3444556
Q ss_pred HHHhcCCeEEEEccccH
Q 013850 121 QVKDSNPKLVITVPELW 137 (435)
Q Consensus 121 ~l~~~~~~~vi~~~~~~ 137 (435)
.++..++++++++....
T Consensus 117 ~~~~~GA~V~~~~~~~~ 133 (352)
T PRK06721 117 QAVAYGAEIISIEGNFD 133 (352)
T ss_pred HHHHcCCEEEEECCCHH
Confidence 78899999999986543
No 345
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=25.64 E-value=1.5e+02 Score=23.35 Aligned_cols=36 Identities=14% Similarity=-0.156 Sum_probs=26.4
Q ss_pred EEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHH
Q 013850 82 VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSE 117 (435)
Q Consensus 82 V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~ 117 (435)
|++.-...-....+.--+.+.|..++|+||.+..++
T Consensus 22 VG~S~~P~r~sy~V~kyL~~~GY~ViPVNP~~~~~e 57 (140)
T COG1832 22 VGASDKPDRPSYRVAKYLQQKGYRVIPVNPKLAGEE 57 (140)
T ss_pred EecCCCCCccHHHHHHHHHHCCCEEEeeCcccchHH
Confidence 344344456677778889999999999999776544
No 346
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=25.52 E-value=3.4e+02 Score=25.14 Aligned_cols=12 Identities=17% Similarity=0.185 Sum_probs=5.9
Q ss_pred ceeeccHHHHHH
Q 013850 209 GVILTHKNFIAA 220 (435)
Q Consensus 209 ~v~~t~~~l~~~ 220 (435)
|+....+.+...
T Consensus 195 G~l~~~~~~~~~ 206 (356)
T cd06451 195 GPIAFSERALER 206 (356)
T ss_pred ceeEECHHHHHH
Confidence 455555555433
No 347
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=25.43 E-value=4.8e+02 Score=27.17 Aligned_cols=89 Identities=7% Similarity=-0.045 Sum_probs=63.1
Q ss_pred cceeeccHHHHHHHHHHHhhhhhccC-CCcEEEecchHHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCce
Q 013850 208 KGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVT 285 (435)
Q Consensus 208 K~v~~t~~~l~~~~~~~~~~~~~~~~-~~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t 285 (435)
....+|++.+...+..++..+.-.+. .+|++...++-..- +....+.++..|+..+.. ..+.++.+...+++.++.
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 195 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWE--WLASIYGIWSQSMVAATVYANLGEDALAYALRETECK 195 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCcc
Confidence 35688999998888887765543332 33777766665432 233677888888877655 566888999999999999
Q ss_pred EEEecHHHHHHHH
Q 013850 286 VWWVVPPIILALA 298 (435)
Q Consensus 286 ~~~~~P~~~~~l~ 298 (435)
.+++....+..+.
T Consensus 196 ~lv~~~~~~~~l~ 208 (700)
T PTZ00216 196 AIVCNGKNVPNLL 208 (700)
T ss_pred EEEECHHHHHHHH
Confidence 9998876665554
No 348
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=25.25 E-value=1.7e+02 Score=27.02 Aligned_cols=48 Identities=17% Similarity=0.164 Sum_probs=35.0
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCCcH-HHHHHHHHHcCcE-EEecCCC
Q 013850 65 IKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAI-ASTANPV 112 (435)
Q Consensus 65 ~~la~~L~~~g~~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~-~v~i~~~ 112 (435)
..++..|.++|+.++++|++++.++..+ .-+++.+..+|.. +..++-.
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG 138 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGG 138 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCC
Confidence 5678889999999999999999877544 3445667778863 3445544
No 349
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=25.22 E-value=1.8e+02 Score=26.29 Aligned_cols=50 Identities=12% Similarity=0.222 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCCCc-HHHHHHHHHHcCcE-EEecCCC
Q 013850 63 IVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAI-ASTANPV 112 (435)
Q Consensus 63 ~~~~la~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~-~v~i~~~ 112 (435)
....+...|++.|+.+++.|.+++..... ...+++.+-.+|.. +..++..
T Consensus 71 ~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~GG 122 (281)
T PRK11493 71 RPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGG 122 (281)
T ss_pred CHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCCC
Confidence 35678888999999999999999987643 33445667777854 3344433
No 350
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=25.07 E-value=2.6e+02 Score=22.67 Aligned_cols=38 Identities=8% Similarity=0.065 Sum_probs=27.1
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcH
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF 92 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~ 92 (435)
..+||.|+.+.++++|..+.+.| .-|.|.-+...+.-+
T Consensus 8 ~~is~~~i~~~i~~la~~I~~~~--~~d~vvgv~~GG~~f 45 (156)
T PRK09177 8 FPVSWDQLHRDARALAWRLLPAG--QWKGIIAVTRGGLVP 45 (156)
T ss_pred EEcCHHHHHHHHHHHHHHHHhhC--CCCEEEEEecCCeeh
Confidence 45899999999999999998754 235555555544433
No 351
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=25.03 E-value=1.5e+02 Score=26.85 Aligned_cols=55 Identities=9% Similarity=0.326 Sum_probs=44.0
Q ss_pred cceeHHHHHHH-----HH-HHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEE
Q 013850 53 ESLSFSQFKSI-----VI-KVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (435)
Q Consensus 53 ~~~Ty~el~~~-----~~-~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 107 (435)
..+.|.++.+. +. .++..+...|+.+++.|.++|..+....+.+||+-.+|....
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 57888888872 22 333444468999999999999999999999999999997654
No 352
>PRK04837 ATP-dependent RNA helicase RhlB; Provisional
Probab=24.96 E-value=6.1e+02 Score=24.37 Aligned_cols=80 Identities=8% Similarity=0.003 Sum_probs=46.9
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHH---hcCCeEEEE
Q 013850 56 SFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVK---DSNPKLVIT 132 (435)
Q Consensus 56 Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~---~~~~~~vi~ 132 (435)
.|.....+...+...|.. ....++.|+++.....-...-.+...|..+..++...+.++-..+++ .-+.+++|+
T Consensus 235 ~~~~~~~k~~~l~~ll~~---~~~~~~lVF~~t~~~~~~l~~~L~~~g~~v~~lhg~~~~~~R~~~l~~F~~g~~~vLVa 311 (423)
T PRK04837 235 FYPSNEEKMRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEEFTRGDLDILVA 311 (423)
T ss_pred EeCCHHHHHHHHHHHHHh---cCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCChhHHHHHHHHHHcCCCcEEEE
Confidence 343334455555555544 23456777776653333333334456888888998888766555554 446788888
Q ss_pred ccccHH
Q 013850 133 VPELWD 138 (435)
Q Consensus 133 ~~~~~~ 138 (435)
++....
T Consensus 312 Tdv~~r 317 (423)
T PRK04837 312 TDVAAR 317 (423)
T ss_pred echhhc
Confidence 765443
No 353
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=24.78 E-value=3.8e+02 Score=26.65 Aligned_cols=84 Identities=13% Similarity=-0.039 Sum_probs=58.1
Q ss_pred eeeccHHHHHHHHHHHhhhhhccCC-CcEEEecchHHHHHHHHHHHHhhhhcCcEEEecC-CCCHHHHHHHHHhcCceEE
Q 013850 210 VILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 287 (435)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~-~d~~l~~~~l~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~l~~~~~t~~ 287 (435)
..+|...+...+..+...+.-.+.. +|++...++-..-.-. .++.++..|+..+..+ ......+...+++.++..+
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~--~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLE--AWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVV 115 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH--HHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEE
Confidence 3578899988877766655433322 3777666655543333 5678888899888774 5678899999999999988
Q ss_pred EecHHHHH
Q 013850 288 WVVPPIIL 295 (435)
Q Consensus 288 ~~~P~~~~ 295 (435)
........
T Consensus 116 ~~~~~~~~ 123 (542)
T PRK06018 116 ITDLTFVP 123 (542)
T ss_pred EEccccHH
Confidence 87654433
No 354
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=24.72 E-value=4.3e+02 Score=22.34 Aligned_cols=80 Identities=14% Similarity=0.117 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhhhhcCcEEEec-CCCCHHHHHHHHHhcCceEEEecHH---HH---HHHHhcccccCCCCcceeEEEe
Q 013850 244 MFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPP---II---LALAKNSLVRKFDISSLKLVGS 316 (435)
Q Consensus 244 l~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~l~~~~~t~~~~~P~---~~---~~l~~~~~~~~~~l~~lr~i~~ 316 (435)
-.|..|........-..|..++.. ....++.+.+.+.++++.++..+-. .+ ..+.+.....+ ..+.+ .+++
T Consensus 93 d~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~-~~~~~-~i~v 170 (201)
T cd02070 93 DIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAG-LRDKV-KVMV 170 (201)
T ss_pred ccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCC-CCcCC-eEEE
Confidence 467777754444444677777755 4567899999999999988765532 22 22222222111 11133 3667
Q ss_pred cCCCCcHHH
Q 013850 317 GAAPLGKEL 325 (435)
Q Consensus 317 gG~~l~~~~ 325 (435)
||.+++.+.
T Consensus 171 GG~~~~~~~ 179 (201)
T cd02070 171 GGAPVNQEF 179 (201)
T ss_pred ECCcCCHHH
Confidence 777777654
No 355
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=24.64 E-value=3.2e+02 Score=20.96 Aligned_cols=38 Identities=8% Similarity=0.086 Sum_probs=28.3
Q ss_pred CCCCCCCEEEEEcC-CCCcHHHHHHHHHHcCcEEEecCC
Q 013850 74 LGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 74 ~g~~~gd~V~l~~~-~~~~~~~~~lA~~~~G~~~v~i~~ 111 (435)
.|+.+++.|.++|. .+.....+.+.+..+|..+..++-
T Consensus 81 ~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~~v~~L~G 119 (128)
T cd01520 81 ARLERDPKLLIYCARGGMRSQSLAWLLESLGIDVPLLEG 119 (128)
T ss_pred hccCCCCeEEEEeCCCCccHHHHHHHHHHcCCceeEeCC
Confidence 58899999999996 466777777777778986554543
No 356
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=24.59 E-value=1.1e+02 Score=21.52 Aligned_cols=39 Identities=5% Similarity=0.120 Sum_probs=32.5
Q ss_pred HHHHHh-CCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 68 SHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 68 a~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
..+|.+ .|++.|+.++-+.....|.+..+=|++++.-+-
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~ 42 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVE 42 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhcee
Confidence 456754 599999999999999999999999999987543
No 357
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=24.37 E-value=1.4e+02 Score=30.53 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=35.6
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 65 ~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
..+...+.+.|+.+++.|.++|..+.....+++++-.+|..
T Consensus 209 ~el~~~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~~ 249 (610)
T PRK09629 209 QDMPEILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYP 249 (610)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCCChHHHHHHHHHHHcCCC
Confidence 45777788889999999999999998888888999999975
No 358
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=24.10 E-value=1.2e+02 Score=20.75 Aligned_cols=27 Identities=11% Similarity=0.331 Sum_probs=22.6
Q ss_pred CCcceeHHHHHHHHHHHHHHHHhCCCC
Q 013850 51 SDESLSFSQFKSIVIKVSHSFRHLGIT 77 (435)
Q Consensus 51 ~~~~~Ty~el~~~~~~la~~L~~~g~~ 77 (435)
.|+.+|..+|.+.++++.+.+++.|.-
T Consensus 27 ~g~~l~~~~l~~~~~~l~~~y~~~GY~ 53 (76)
T PF08479_consen 27 IGRCLTLADLQQLADALTNYYREKGYI 53 (76)
T ss_dssp TTSBB-HHHHHHHHHHHHHHHHHTT-T
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHcCce
Confidence 368999999999999999999998853
No 359
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=24.04 E-value=4.1e+02 Score=23.78 Aligned_cols=63 Identities=13% Similarity=0.062 Sum_probs=44.9
Q ss_pred HHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEE--ecCCCCCHHHHHHHHHhcCCeEEEE
Q 013850 70 SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS--TANPVYTVSELSKQVKDSNPKLVIT 132 (435)
Q Consensus 70 ~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v--~i~~~~~~~~~~~~l~~~~~~~vi~ 132 (435)
.+.+..--+|-+|+.|+.-..+..+.+..+..+|+-+. --||....+.+...|...+..+.--
T Consensus 34 ~~~~~kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~ 98 (268)
T PF05221_consen 34 RFEAEKPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAW 98 (268)
T ss_dssp HHTTT-TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-
T ss_pred HhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEe
Confidence 33333445788999999999999999999999998554 5678888888888888888876553
No 360
>PRK08198 threonine dehydratase; Provisional
Probab=23.59 E-value=4.1e+02 Score=25.46 Aligned_cols=91 Identities=13% Similarity=0.029 Sum_probs=53.4
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l 122 (435)
++.+-.++.+..-||++-... ..+.....+. .++.|.. ...+-....+.++|..+|..++.+-|..........+
T Consensus 38 ~i~~K~E~~nptGS~K~R~a~-~~i~~~~~~~---~~~~vv~-aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~ 112 (404)
T PRK08198 38 EVYLKCENLQRTGSFKIRGAY-NKIASLSEEE---RARGVVA-ASAGNHAQGVAYAASLLGIKATIVMPETAPLSKVKAT 112 (404)
T ss_pred EEEEEECCCCCCCCCHHHHHH-HHHHhccHhh---cCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 455555543345565543222 1222222222 2344433 4456667777889999998666655655555556678
Q ss_pred HhcCCeEEEEccccHH
Q 013850 123 KDSNPKLVITVPELWD 138 (435)
Q Consensus 123 ~~~~~~~vi~~~~~~~ 138 (435)
+..+++++++..+..+
T Consensus 113 ~~~GA~Vi~~~~~~~~ 128 (404)
T PRK08198 113 RSYGAEVVLHGDVYDE 128 (404)
T ss_pred HhCCCEEEEECCCHHH
Confidence 9999999999765433
No 361
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=23.52 E-value=4.5e+02 Score=25.19 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=63.6
Q ss_pred CchHHHHHhhcccCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE
Q 013850 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (435)
Q Consensus 27 ~tl~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 106 (435)
....+...+.++.--+.+.+.... +.+-+-+|.+.-.+.=+.+-..-+.+.+-|.|-..-...++.+++++.-.|-.+
T Consensus 43 ~~~P~fv~ea~~~~~~~~~~~qYt--~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeV 120 (420)
T KOG0257|consen 43 FPPPKFVTEAAKNAAKEPSTNQYT--RGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEV 120 (420)
T ss_pred CCCcHHHHHHHHHHhccchhcccc--ccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEE
Confidence 344444444444444444444332 445555665554443333333345566668887776667777999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEccc
Q 013850 107 STANPVYTVSELSKQVKDSNPKLVITVPE 135 (435)
Q Consensus 107 v~i~~~~~~~~~~~~l~~~~~~~vi~~~~ 135 (435)
+.+.|-++.-. ..+...+...+++...
T Consensus 121 ii~eP~fd~Y~--~~~~maG~tpv~v~~~ 147 (420)
T KOG0257|consen 121 IVFEPFFDCYI--PQVVMAGGTPVFVPLK 147 (420)
T ss_pred EEecCcchhhh--hHHhhcCCcceeeccc
Confidence 99999987644 3344556666665543
No 362
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=23.28 E-value=3.8e+02 Score=26.07 Aligned_cols=57 Identities=11% Similarity=0.059 Sum_probs=25.0
Q ss_pred EEcCCCCcHHH-HHHHHHHcCcEEEecCCCCCH--HHHHHHHHhcCCeEEEEccccHHHH
Q 013850 84 IFAPNSIHFPI-CFLGVIAIGAIASTANPVYTV--SELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 84 l~~~~~~~~~~-~~lA~~~~G~~~v~i~~~~~~--~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
+..+++-+.+. ++.++++.|-.++..+..+.. ..+...+.+.++++.+++.+..+.+
T Consensus 83 v~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l 142 (433)
T PRK08134 83 IATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGW 142 (433)
T ss_pred EEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHH
Confidence 44555444433 333445555443333333321 2223334556666666654433333
No 363
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=23.15 E-value=2.6e+02 Score=26.60 Aligned_cols=59 Identities=15% Similarity=0.039 Sum_probs=42.4
Q ss_pred CEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHH
Q 013850 80 DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (435)
Q Consensus 80 d~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (435)
.+-.++...+-.-..+.++|..+|..++.+-|..........++..++++++++.....
T Consensus 94 ~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~ 152 (376)
T TIGR01747 94 QATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDD 152 (376)
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 44556666666777788889999986665555555556677778999999999865433
No 364
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=23.14 E-value=5.2e+02 Score=23.90 Aligned_cols=14 Identities=0% Similarity=0.071 Sum_probs=7.0
Q ss_pred HHHHHhcCCeEEEE
Q 013850 119 SKQVKDSNPKLVIT 132 (435)
Q Consensus 119 ~~~l~~~~~~~vi~ 132 (435)
...++..+++++.+
T Consensus 90 ~~~~~~~g~~~~~v 103 (356)
T cd06451 90 ADMAERYGADVDVV 103 (356)
T ss_pred HHHHHHhCCCeEEe
Confidence 34445555555554
No 365
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=22.95 E-value=3.4e+02 Score=24.57 Aligned_cols=90 Identities=14% Similarity=0.101 Sum_probs=56.5
Q ss_pred CCCceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHH
Q 013850 40 YSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELS 119 (435)
Q Consensus 40 ~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~ 119 (435)
...++.+..++.+..-++++... ...+.. .++. .++.| +....+-.-..+..+|...|..++.+-|........
T Consensus 22 ~~~~i~~K~E~~~ptgs~K~R~a-~~~l~~-a~~~---~~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~ 95 (306)
T PF00291_consen 22 GGANIYLKREDLNPTGSFKDRGA-YYLLSR-AKEK---GGRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKL 95 (306)
T ss_dssp TTSEEEEEEGGGSTTSBTHHHHH-HHHHHH-HHHT---TTSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHH
T ss_pred cCCeEEEEECCCCCcCCcccccc-hhhhhh-cccc---cccee-eeeccCCceehhhhhhhhccccceeeeccccccccc
Confidence 34455555544344446655332 122222 2222 34556 666667777778888888898777666776666777
Q ss_pred HHHHhcCCeEEEEccc
Q 013850 120 KQVKDSNPKLVITVPE 135 (435)
Q Consensus 120 ~~l~~~~~~~vi~~~~ 135 (435)
..++..+++++.+...
T Consensus 96 ~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 96 KQMRALGAEVILVPGD 111 (306)
T ss_dssp HHHHHTTCEEEEESST
T ss_pred cceeeecceEEEcccc
Confidence 8889999999988653
No 366
>PF14552 Tautomerase_2: Tautomerase enzyme; PDB: 2AAG_C 2AAL_A 2AAJ_A 1MWW_C.
Probab=22.90 E-value=1.1e+02 Score=21.74 Aligned_cols=53 Identities=23% Similarity=0.338 Sum_probs=27.7
Q ss_pred cCCCceeeeecCCCcceeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCCc
Q 013850 39 SYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIH 91 (435)
Q Consensus 39 ~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~~~~~ 91 (435)
.+.++..++.-..+.--|-++=.+.-+.++..|.+ .|+.+.|...++.+|..+
T Consensus 24 ~Rs~~~v~I~It~~~gRs~e~K~~ly~~l~~~L~~~~gi~p~Dv~I~l~e~~~e 77 (82)
T PF14552_consen 24 DRSDDFVIIQITSGAGRSTEQKKALYRALAERLAEKLGIRPEDVMIVLVENPRE 77 (82)
T ss_dssp TS-TT-EEEEEEECS---HHHHHHHHHHHHHHHHHHH---GGGEEEEEEEE-GG
T ss_pred CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEECCcc
Confidence 34445444433323445555555666777777864 799999988888877643
No 367
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=22.80 E-value=90 Score=26.94 Aligned_cols=35 Identities=11% Similarity=-0.004 Sum_probs=24.2
Q ss_pred HHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEE
Q 013850 96 FLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 132 (435)
Q Consensus 96 ~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~ 132 (435)
.=++..+|+.+++|++..+.+.+..+++.. +-++.
T Consensus 30 v~~i~~aG~~pv~ip~~~~~~~~~~~l~~i--dGlll 64 (217)
T PF07722_consen 30 VKAIEAAGGRPVPIPYDADDEELDELLDRI--DGLLL 64 (217)
T ss_dssp HHHHHHTT-EEEEE-SS--HHHHHHHHHCS--SEEEE
T ss_pred HHHHHHcCCEEEEEccCCCHHHHHHHHhhc--CEEEE
Confidence 446788899999999999999999998854 44443
No 368
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.74 E-value=3e+02 Score=24.89 Aligned_cols=81 Identities=11% Similarity=0.174 Sum_probs=45.7
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecC--CCCCHH---HHHHHHHhcCCeEE
Q 013850 56 SFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN--PVYTVS---ELSKQVKDSNPKLV 130 (435)
Q Consensus 56 Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~--~~~~~~---~~~~~l~~~~~~~v 130 (435)
.++++.++.+.+-..+++.--....+..+...+.+.++.-.+++-..+.. -+. ..-++. ++...++..++++|
T Consensus 155 N~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~I 232 (286)
T cd01019 155 NLEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVF--TIDPEIDPGAKRLAKIRKEIKEKGATCV 232 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeee--cCCCCCCCCHHHHHHHHHHHHHcCCcEE
Confidence 35556666665555554421122355667777777777665554333211 122 222444 45566778999999
Q ss_pred EEccccHH
Q 013850 131 ITVPELWD 138 (435)
Q Consensus 131 i~~~~~~~ 138 (435)
|+++...+
T Consensus 233 f~e~~~~~ 240 (286)
T cd01019 233 FAEPQFHP 240 (286)
T ss_pred EecCCCCh
Confidence 99876543
No 369
>PF12646 DUF3783: Domain of unknown function (DUF3783); InterPro: IPR016621 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.71 E-value=2.3e+02 Score=18.42 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHH
Q 013850 63 IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICF 96 (435)
Q Consensus 63 ~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~ 96 (435)
...++-..+++.|+ +...-++..|++..|-+..
T Consensus 13 el~~~l~~~r~~~~-~~~~kAvlT~tN~~Wt~~~ 45 (58)
T PF12646_consen 13 ELDKFLDALRKAGI-PIPLKAVLTPTNINWTLKD 45 (58)
T ss_pred HHHHHHHHHHHcCC-CcceEEEECCCcccCcHHH
Confidence 34455555666676 6666777777777665543
No 370
>PRK07050 cystathionine beta-lyase; Provisional
Probab=22.69 E-value=4.4e+02 Score=25.16 Aligned_cols=27 Identities=11% Similarity=0.006 Sum_probs=16.4
Q ss_pred HHHHHHHHhhCCCCeeecCcCcccccc
Q 013850 323 KELMEDCQKNIPGATIFQGYGMTETCA 349 (435)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~yG~tE~~~ 349 (435)
.+...++.+.+....+-..+|..|+..
T Consensus 323 ~~~~~~~~~~l~~~~~~~s~G~~~sl~ 349 (394)
T PRK07050 323 PAQVDAFVEALELFAIGWSWGGACSLA 349 (394)
T ss_pred HHHHHHHHHcCCCCeeccccCCccceE
Confidence 455566666665455556677777553
No 371
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=22.63 E-value=5e+02 Score=22.32 Aligned_cols=56 Identities=7% Similarity=0.040 Sum_probs=43.6
Q ss_pred CCEEEEEcCCC----CcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcc
Q 013850 79 KDVVLIFAPNS----IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 79 gd~V~l~~~~~----~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (435)
.-+|.+.+..+ ....++-..+-..|.-++-+..+.+.+++...+.+.+|++|..+.
T Consensus 88 ~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~ 147 (213)
T cd02069 88 KGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSG 147 (213)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 34666666664 334444555566799999999999999999999999999999874
No 372
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=22.61 E-value=4.5e+02 Score=25.66 Aligned_cols=56 Identities=13% Similarity=0.235 Sum_probs=37.7
Q ss_pred HHHHHHHhCCCC--CCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCC-------CCCHHHHHHHHHh
Q 013850 66 KVSHSFRHLGIT--KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP-------VYTVSELSKQVKD 124 (435)
Q Consensus 66 ~la~~L~~~g~~--~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~-------~~~~~~~~~~l~~ 124 (435)
.++-.|...+.+ +|+.|+ +.+++ +..+.-|+..+|+.++.+++ ..+.+.++..++.
T Consensus 136 al~laL~alr~~~~~gd~VI-~p~~t--h~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~ 200 (444)
T TIGR03531 136 SLSLCLSALRHKRPKAKYVI-WPRID--QKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEE 200 (444)
T ss_pred HHHHHHHHcCCcCCCCCEEE-EECcC--hHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHh
Confidence 333445555543 477554 44443 88889999999998888873 3367888888875
No 373
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=22.55 E-value=2.9e+02 Score=20.34 Aligned_cols=46 Identities=11% Similarity=0.008 Sum_probs=32.5
Q ss_pred cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcE
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 105 (435)
..+.+.+|... +...+..++..|.++|..+.....+...+..+|..
T Consensus 47 inip~~~l~~~-------~~~l~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~ 92 (109)
T cd01533 47 VSCPGAELVLR-------VGELAPDPRTPIVVNCAGRTRSIIGAQSLINAGLP 92 (109)
T ss_pred eeCCHHHHHHH-------HHhcCCCCCCeEEEECCCCchHHHHHHHHHHCCCC
Confidence 45677666543 33344456778999999988887777888888873
No 374
>PRK06234 methionine gamma-lyase; Provisional
Probab=22.50 E-value=4.8e+02 Score=24.93 Aligned_cols=26 Identities=27% Similarity=0.125 Sum_probs=14.1
Q ss_pred HHHHHHHhhCCCCeeecCcCcccccc
Q 013850 324 ELMEDCQKNIPGATIFQGYGMTETCA 349 (435)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~yG~tE~~~ 349 (435)
+...++.+.+.-..+-..+|.+|+..
T Consensus 324 ~~~~~f~~~l~~~~~~~s~G~~~sl~ 349 (400)
T PRK06234 324 EEGKVVMNNVKLATLAVSLGDAETLI 349 (400)
T ss_pred HHHHHHHHhCCcceEeccCCCCCcee
Confidence 33455666554344455666666543
No 375
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=22.47 E-value=2.6e+02 Score=22.87 Aligned_cols=21 Identities=10% Similarity=0.120 Sum_probs=18.7
Q ss_pred ceeHHHHHHHHHHHHHHHHhC
Q 013850 54 SLSFSQFKSIVIKVSHSFRHL 74 (435)
Q Consensus 54 ~~Ty~el~~~~~~la~~L~~~ 74 (435)
-+||.|+.+.+.++|..+.+.
T Consensus 2 lis~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 2 LIPEEQIKARIAELAKQITED 22 (166)
T ss_pred ccCHHHHHHHHHHHHHHHHHH
Confidence 379999999999999999764
No 376
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.46 E-value=6e+02 Score=23.20 Aligned_cols=76 Identities=13% Similarity=0.012 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCCcHHH---HHHHHHHcCcEE--EecCCCCCHHHHHHHHHhcC----C
Q 013850 58 SQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPI---CFLGVIAIGAIA--STANPVYTVSELSKQVKDSN----P 127 (435)
Q Consensus 58 ~el~~~~~~la~~L~~~-g~~~gd~V~l~~~~~~~~~~---~~lA~~~~G~~~--v~i~~~~~~~~~~~~l~~~~----~ 127 (435)
+++.+...+-...|++. |.+|+=.+.++..+...... -.=+|-.+|+.+ .-++.+.+.+++...+++.+ .
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (293)
T PRK14185 11 AQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDV 90 (293)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 34444444444456554 78886666666655433222 244888999877 44666777888887777664 3
Q ss_pred eEEEEc
Q 013850 128 KLVITV 133 (435)
Q Consensus 128 ~~vi~~ 133 (435)
+-|++.
T Consensus 91 ~GIlvq 96 (293)
T PRK14185 91 DGFIVQ 96 (293)
T ss_pred CeEEEe
Confidence 455554
No 377
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=22.33 E-value=4.8e+02 Score=25.19 Aligned_cols=66 Identities=11% Similarity=0.048 Sum_probs=47.9
Q ss_pred HHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEE--EecCCCCCHHHHHHHHHhcCCeEEEEc
Q 013850 68 SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA--STANPVYTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 68 a~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~--v~i~~~~~~~~~~~~l~~~~~~~vi~~ 133 (435)
...+.+..--+|-+|+.+++-..+..+.+..+..+|+-+ ...||....+++...|...+..+.-..
T Consensus 25 ~~~~~~~~p~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~l~~~gi~v~a~~ 92 (413)
T cd00401 25 REEYGASKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGIPVFAWK 92 (413)
T ss_pred HHHhhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhcCceEEEEc
Confidence 333433344578899999999999888888888888853 334677678888888888888766643
No 378
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=22.15 E-value=6.1e+02 Score=23.17 Aligned_cols=71 Identities=11% Similarity=0.126 Sum_probs=47.3
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCc----------------------------HHHHHHHHHHcCcEEE
Q 013850 56 SFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH----------------------------FPICFLGVIAIGAIAS 107 (435)
Q Consensus 56 Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~----------------------------~~~~~lA~~~~G~~~v 107 (435)
....+.+....+..++++.|+. ..|.|.+-++-. ..+-..|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 4455666678888888887664 456666665533 2345678889999999
Q ss_pred ecCCCCCH--HHHHHHHHhcCCe
Q 013850 108 TANPVYTV--SELSKQVKDSNPK 128 (435)
Q Consensus 108 ~i~~~~~~--~~~~~~l~~~~~~ 128 (435)
-.-|+... ..+..+.++.+.-
T Consensus 205 N~tP~~~a~~P~l~ela~~~gvp 227 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGVP 227 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTEE
T ss_pred eccCccccCCHHHHHHHHHcCCC
Confidence 88888765 7777777776654
No 379
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=22.07 E-value=6.7e+02 Score=23.64 Aligned_cols=11 Identities=18% Similarity=0.320 Sum_probs=5.9
Q ss_pred CCCCEEEEEcC
Q 013850 77 TKKDVVLIFAP 87 (435)
Q Consensus 77 ~~gd~V~l~~~ 87 (435)
++||.|++..|
T Consensus 125 ~~gd~Vlv~~P 135 (380)
T PLN03026 125 DPGDKIIDCPP 135 (380)
T ss_pred CCCCEEEEcCC
Confidence 45665555544
No 380
>TIGR00260 thrC threonine synthase. Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.
Probab=21.92 E-value=6.3e+02 Score=23.24 Aligned_cols=88 Identities=14% Similarity=0.030 Sum_probs=51.8
Q ss_pred ceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCC-CHHHHHHH
Q 013850 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY-TVSELSKQ 121 (435)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~-~~~~~~~~ 121 (435)
++.+-....+..-||++.. +..+-..+.+.| ....+....+-.-..+.++|...|.-++.+-|.. ....-...
T Consensus 40 ~i~~K~E~~nptGSfKdR~--a~~~l~~a~~~g----~~~vv~aSsGN~g~a~A~~a~~~g~~~~v~~p~~~~s~~k~~~ 113 (328)
T TIGR00260 40 NLYVLELFHNPTLSFKDRG--MAVALTKALELG----NDTVLCASTGNTGAAAAAYAGKAGVKVVILYPAGKISLGKLAQ 113 (328)
T ss_pred cEEehhhccCCchhhHhhh--HHHHHHHHHHcC----CCEEEEeCCcHHHHHHHHHhccCCCcEEEEECCCCCCHHHHHH
Confidence 5555555555677777765 222222223333 2244444444455555578888898666655654 33445556
Q ss_pred HHhcCCeEEEEcccc
Q 013850 122 VKDSNPKLVITVPEL 136 (435)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (435)
++..++++++++.+.
T Consensus 114 ~~~~GA~Vi~~~~~~ 128 (328)
T TIGR00260 114 ALGYNAEVVAIDGNF 128 (328)
T ss_pred HHhcCcEEEEecCCH
Confidence 678999999998643
No 381
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=21.91 E-value=65 Score=23.64 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=22.9
Q ss_pred CcccccCCcEEEEEeCCCCccCCCC---CceeEEEeCC
Q 013850 365 SAGTLVAGVEAQIVSVDTLKPLPPN---QLGEIWVRGP 399 (435)
Q Consensus 365 ~~G~~~~~~~~~i~d~~~~~~~~~g---~~Gei~v~g~ 399 (435)
.-|+|++|+++++.+...++++..+ ..|...+...
T Consensus 23 ~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~~~ 60 (97)
T PF11974_consen 23 STGKPVAGAEVELYDSRNGQVLASGKTDADGFASFDST 60 (97)
T ss_pred CCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEecCC
Confidence 3489999999999983356555443 3455555443
No 382
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=21.69 E-value=2.8e+02 Score=22.88 Aligned_cols=45 Identities=13% Similarity=0.216 Sum_probs=28.4
Q ss_pred cceeHHHHHHHHHHHHHHHHhC--CCCCCCEEEEEcCCCCcHHHHHHHH
Q 013850 53 ESLSFSQFKSIVIKVSHSFRHL--GITKKDVVLIFAPNSIHFPICFLGV 99 (435)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~--g~~~gd~V~l~~~~~~~~~~~~lA~ 99 (435)
.-+|+.|+.+++.++|..+.+. |.+ .+.|.-+...+. .....|+-
T Consensus 5 ~l~s~~~i~~~i~~la~~i~~~~~~~~-~~viv~il~gG~-~~a~~La~ 51 (176)
T PRK05205 5 EILDAEALRRALTRIAHEIIERNKGLD-NLVLVGIKTRGV-WLAERLAE 51 (176)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHcCCCC-CeEEEEEccCCH-HHHHHHHH
Confidence 4589999999999999999763 332 343443444444 33344433
No 383
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.57 E-value=2.8e+02 Score=24.96 Aligned_cols=80 Identities=11% Similarity=0.080 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC--CCH---HHHHHHHHhcCCeE
Q 013850 57 FSQFKSIVIKVSHSFRHL--GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV--YTV---SELSKQVKDSNPKL 129 (435)
Q Consensus 57 y~el~~~~~~la~~L~~~--g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~--~~~---~~~~~~l~~~~~~~ 129 (435)
++.+.++.+.+-..+++. .+...+++.+...+.+.++.-.+++-..+..- +.+. -++ .++...++..++++
T Consensus 136 ~~~~~~~L~~l~~~~~~~l~~~~~~~~~~~t~H~af~Y~~~~ygl~~~~~~~--~~~~~eps~~~l~~l~~~ik~~~v~~ 213 (276)
T cd01016 136 SEAYVEELDSLDAYAKKKIAEIPEQQRVLVTAHDAFGYFGRAYGFEVKGLQG--ISTDSEAGLRDINELVDLIVERKIKA 213 (276)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchhcCeEEEecCcHHHHHHHcCCeEecCcC--CCcccCCCHHHHHHHHHHHHHcCCCE
Confidence 444555555555544432 23334578888888888777666655544221 1222 233 45566778899999
Q ss_pred EEEccccHH
Q 013850 130 VITVPELWD 138 (435)
Q Consensus 130 vi~~~~~~~ 138 (435)
||+++....
T Consensus 214 if~e~~~~~ 222 (276)
T cd01016 214 IFVESSVNQ 222 (276)
T ss_pred EEEeCCCCH
Confidence 999876544
No 384
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=21.52 E-value=4.1e+02 Score=25.39 Aligned_cols=99 Identities=13% Similarity=0.164 Sum_probs=49.7
Q ss_pred eHHHHHHHH-HHHHHHHHhCC----CCCCCEEEEEcCCCC--cHHHHHHHHHHc------CcEEEecCCCC----CHHHH
Q 013850 56 SFSQFKSIV-IKVSHSFRHLG----ITKKDVVLIFAPNSI--HFPICFLGVIAI------GAIASTANPVY----TVSEL 118 (435)
Q Consensus 56 Ty~el~~~~-~~la~~L~~~g----~~~gd~V~l~~~~~~--~~~~~~lA~~~~------G~~~v~i~~~~----~~~~~ 118 (435)
++.++.+.+ ..++..+...+ -..+..|+++.+++. -..++-+|.... |..+..+..+. ..+.+
T Consensus 146 ~~~~v~~~l~~~l~~~i~~~~~~~~~~~~~vi~lvGptGvGKTTT~aKLA~~~~~~~~~~g~~V~lit~Dt~R~aa~eQL 225 (388)
T PRK12723 146 DYDKVRDSVIIYIAKTIKCSGSIIDNLKKRVFILVGPTGVGKTTTIAKLAAIYGINSDDKSLNIKIITIDNYRIGAKKQI 225 (388)
T ss_pred CHHHHHHHHHHHHHHHhhccCccccCCCCeEEEEECCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccCccHHHHHHH
Confidence 555666554 33444443211 122357889999985 334444554332 44444444433 23456
Q ss_pred HHHHHhcCCeEEEEcc--ccHHHHhhc-CCCcEEeccCC
Q 013850 119 SKQVKDSNPKLVITVP--ELWDKVKDL-NLPAVLLGSKD 154 (435)
Q Consensus 119 ~~~l~~~~~~~vi~~~--~~~~~~~~~-~~~~~~~~~~~ 154 (435)
..+.+..+..+..... +....+... ....++++..+
T Consensus 226 ~~~a~~lgvpv~~~~~~~~l~~~L~~~~~~DlVLIDTaG 264 (388)
T PRK12723 226 QTYGDIMGIPVKAIESFKDLKEEITQSKDFDLVLVDTIG 264 (388)
T ss_pred HHHhhcCCcceEeeCcHHHHHHHHHHhCCCCEEEEcCCC
Confidence 6677777776554442 222222222 24566666554
No 385
>PRK10595 SOS cell division inhibitor; Provisional
Probab=21.37 E-value=3.6e+02 Score=22.14 Aligned_cols=37 Identities=11% Similarity=0.112 Sum_probs=22.7
Q ss_pred HHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCc
Q 013850 68 SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (435)
Q Consensus 68 a~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 104 (435)
+.+|.+.|+..+..+.|...+..+.+-++-=|++.|.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~ 106 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGN 106 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCC
Confidence 4556666776666555555555666666666666664
No 386
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=21.35 E-value=3.1e+02 Score=25.92 Aligned_cols=59 Identities=7% Similarity=0.047 Sum_probs=43.5
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCC-----C---HHHHHHHHHhcCCeEEEEcc
Q 013850 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY-----T---VSELSKQVKDSNPKLVITVP 134 (435)
Q Consensus 76 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~-----~---~~~~~~~l~~~~~~~vi~~~ 134 (435)
++++++|++.+.-+.+..++..-+.+.|.-++.+.-+. + .+..+.+.+..+.+..+.+-
T Consensus 2 ~~~~~kVlValSGGVDSsvaa~LL~~~G~~V~~v~~~~~~~~~~~~d~~~a~~va~~LgIp~~vvd~ 68 (360)
T PRK14665 2 MEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAERLGIGHITYDA 68 (360)
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHHcCCeEEEEEEecCCCCCChHHHHHHHHHHHHhCCCEEEEec
Confidence 56789999999999999998888888886554443221 2 23356788888888887764
No 387
>COG4813 ThuA Trehalose utilization protein [Carbohydrate transport and metabolism]
Probab=21.00 E-value=1.1e+02 Score=25.41 Aligned_cols=53 Identities=6% Similarity=-0.046 Sum_probs=30.0
Q ss_pred EEEEEeCCCCccCCCCCceeEEEeCCCccccccccCCcccccccc-cccccCcceecC
Q 013850 374 EAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW-GCEHTDSFIRGK 430 (435)
Q Consensus 374 ~~~i~d~~~~~~~~~g~~Gei~v~g~~~~~g~~y~~~~~~~~~~~-~~~~~~~~~~tg 430 (435)
++-++| -+.+.+.|---.+.+...-+... -|.-|+.....| +||..|..||.|
T Consensus 128 RvWvvn--p~HPIA~GigE~~~le~eEMYGE--~F~vPeP~EtvfisWfeGGEVFRSg 181 (261)
T COG4813 128 RVWVVN--PGHPIAEGIGESFELENEEMYGE--QFSVPEPLETVFISWFEGGEVFRSG 181 (261)
T ss_pred eEEEeC--CCCchhhcchhhEEecchhhccC--ccCCCCCcceeEEEeecCcceeecc
Confidence 344555 35555555422233444334434 555566666666 888888888776
No 388
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=20.94 E-value=6.4e+02 Score=24.45 Aligned_cols=97 Identities=8% Similarity=0.008 Sum_probs=53.5
Q ss_pred CCCceeeeecCCC-------cceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC-CcHHHHHHHHHHcCcEEEecCC
Q 013850 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS-IHFPICFLGVIAIGAIASTANP 111 (435)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~-~~~~~~~lA~~~~G~~~v~i~~ 111 (435)
.++..+++...+| ..+|++.+...+..++..+ ++.+. ++...+|-. .-.+..++.++..|++++..+.
T Consensus 118 ~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~~~---~~~~~-~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~ 193 (452)
T PRK07445 118 NLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQRYF---QLQQV-NSFCVLPLYHVSGLMQFMRSFLTGGKLVILPY 193 (452)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHHHh---cCCCC-ceEeccCchhhhhHHHHHHHHHcCCeEEEcCh
Confidence 4566676543323 4679988877776666554 44443 444455433 2223456678888998877653
Q ss_pred CCCHHHHHHHHHhcCCeEEEEccccHHHHh
Q 013850 112 VYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (435)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (435)
....+ ........++.++...+..+..+.
T Consensus 194 ~~~~~-~~~~~~~~~~t~~~~vP~~l~~l~ 222 (452)
T PRK07445 194 KRLKS-GQELPPNPSDFFLSLVPTQLQRLL 222 (452)
T ss_pred Hhccc-hhhhhhhcCceEEEehHHHHHHHH
Confidence 21111 122223455556666666555443
No 389
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=20.86 E-value=3.8e+02 Score=23.63 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=54.6
Q ss_pred hhcccCCCceeeee-cCC--CcceeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecC
Q 013850 35 RNSASYSSKLALID-ADS--DESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN 110 (435)
Q Consensus 35 ~~~~~~p~~~a~~~-~~~--~~~~Ty~el~~~~~~la~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~ 110 (435)
+.+.++++...+.= ++. .+...+.++.+.-..+++.|.+.. ..+.+.|.+=+|....-. .--++..+..+.++++
T Consensus 70 ~~~~~~~~g~~~LPfG~l~~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~iliD~P~g~~~~-~~~al~~aD~vL~V~~ 148 (243)
T PF06564_consen 70 QAAYRYSDGVDFLPFGQLTEAEREAFEQLAQDPQWLARALAALKALGPYDWILIDTPPGPSPY-TRQALAAADLVLVVVN 148 (243)
T ss_pred HHhhccCCCCEEEcCCCCCHHHHHHHHHhhcCHHHHHHHHHHHhccCCCCEEEEeCCCCCcHH-HHHHHHhCCeEEEEeC
Confidence 33456667666652 211 145666667777888899998877 667789999999875544 4557777888888888
Q ss_pred CCCC
Q 013850 111 PVYT 114 (435)
Q Consensus 111 ~~~~ 114 (435)
|+..
T Consensus 149 ~Da~ 152 (243)
T PF06564_consen 149 PDAA 152 (243)
T ss_pred CCHH
Confidence 8753
No 390
>PRK07409 threonine synthase; Validated
Probab=20.81 E-value=3.3e+02 Score=25.56 Aligned_cols=89 Identities=11% Similarity=-0.020 Sum_probs=51.1
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCC-CHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY-TVSELSK 120 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~-~~~~~~~ 120 (435)
.++.+-.+..+..-||++-... ..+.. +.+.|. + ..+....+-.-..+.++|...|..+..+-|.. .......
T Consensus 46 ~~i~~K~E~~nptGSfKdR~a~-~~l~~-a~~~g~---~-~iv~aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~ 119 (353)
T PRK07409 46 VEVYVKYEGLNPTGSFKDRGMT-MAVTK-AKEEGA---K-AVICASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLA 119 (353)
T ss_pred CeEEEEecCCCCccchHHHHHH-HHHHH-HHHCCC---C-EEEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHH
Confidence 3566655544455566653221 12233 334342 2 33444555556777888899998654444543 3344455
Q ss_pred HHHhcCCeEEEEcccc
Q 013850 121 QVKDSNPKLVITVPEL 136 (435)
Q Consensus 121 ~l~~~~~~~vi~~~~~ 136 (435)
.++..++++++++..+
T Consensus 120 ~~~~~GA~Vi~~~~~~ 135 (353)
T PRK07409 120 QAVMYGAEIIQIDGNF 135 (353)
T ss_pred HHHhcCCEEEEECCCH
Confidence 6688999999998743
No 391
>PRK07868 acyl-CoA synthetase; Validated
Probab=20.75 E-value=5.4e+02 Score=28.29 Aligned_cols=69 Identities=13% Similarity=0.183 Sum_probs=48.9
Q ss_pred hCCCCCCCEEEEEcCCCCc--HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEccccHHHHhh
Q 013850 73 HLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (435)
Q Consensus 73 ~~g~~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (435)
..++.++|++...+|=.-. +...+++++..|.+ +.+.+.++.+.+...+++.++.++...+..+..+..
T Consensus 640 ~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~-vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~ 710 (994)
T PRK07868 640 AAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSR-IALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVD 710 (994)
T ss_pred hcCCCCCCeEEEecChHHHhHHHHHHHHHhccceE-EEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 3478899998888875432 22334455555554 445567889999999999999999998877766544
No 392
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=20.73 E-value=4.6e+02 Score=25.46 Aligned_cols=25 Identities=8% Similarity=0.017 Sum_probs=12.0
Q ss_pred HHHHHHHhhCCCCeeecCcCccccc
Q 013850 324 ELMEDCQKNIPGATIFQGYGMTETC 348 (435)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~yG~tE~~ 348 (435)
+...++.+.+.-..+-..+|..|+.
T Consensus 354 ~~~~~f~~~l~l~~~~~slG~~~sl 378 (431)
T PRK08248 354 EAGKKLIDSVKLFSHLANVGDSKSL 378 (431)
T ss_pred HHHHHHHHhCCcceeccccCCCCee
Confidence 3344555554323334456666644
No 393
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=20.72 E-value=3.8e+02 Score=25.03 Aligned_cols=75 Identities=0% Similarity=-0.133 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCC-cHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEc
Q 013850 57 FSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 57 y~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~ 133 (435)
|.++.+.+++....| .|.+++...+++..++. .+..++.++...|...+.+.+..-...+..+.+..+.+++.+.
T Consensus 33 ~~~~~~~~r~~la~l--~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~ 108 (363)
T TIGR02326 33 YNIVVEQIRQQLLAL--ATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVD 108 (363)
T ss_pred HHHHHHHHHHHHHHH--hCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEe
Confidence 445544443333333 25555533444444443 4444444555555443333333323334455666777776654
No 394
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=20.70 E-value=5.1e+02 Score=24.68 Aligned_cols=57 Identities=7% Similarity=0.068 Sum_probs=27.8
Q ss_pred EEcCCCCcHHHH-HHHHHHcCcEEEecCCCCCH--HHHHHHHHhcCCeEEEEccccHHHH
Q 013850 84 IFAPNSIHFPIC-FLGVIAIGAIASTANPVYTV--SELSKQVKDSNPKLVITVPELWDKV 140 (435)
Q Consensus 84 l~~~~~~~~~~~-~lA~~~~G~~~v~i~~~~~~--~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (435)
++.+++.+.+.. +.+++..|-.++.-++.+.. ..+...+...+.++++++....+.+
T Consensus 80 v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 139 (390)
T PRK08133 80 VATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAW 139 (390)
T ss_pred EEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 334455444333 34455556544443333332 2233456667777777765434433
No 395
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=20.70 E-value=3.1e+02 Score=20.61 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=21.4
Q ss_pred ceeHHHHHHHHHHHHHHHHhCCCCC
Q 013850 54 SLSFSQFKSIVIKVSHSFRHLGITK 78 (435)
Q Consensus 54 ~~Ty~el~~~~~~la~~L~~~g~~~ 78 (435)
.++|+++.+.++.+|..|.+.+...
T Consensus 4 ~~~~~~~~~~~~~la~~i~~~~~~~ 28 (125)
T PF00156_consen 4 ILSPEQIEALAERLAEQIKESGFDF 28 (125)
T ss_dssp EEBHHHHHHHHHHHHHHHHHHTTTS
T ss_pred EEcHHHHHHHHHHHHHHHHHhCCCC
Confidence 5799999999999999999876543
No 396
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=20.50 E-value=7e+02 Score=23.22 Aligned_cols=75 Identities=4% Similarity=-0.065 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC-CCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEc
Q 013850 57 FSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 57 y~el~~~~~~la~~L~~~g~~~gd~V~l~~~~-~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~ 133 (435)
|.+..+.+++....| .|..++..+.++.++ +..+..++.++...|...+...+..-...+....+..+.+++...
T Consensus 35 ~~~~~~~~~~~l~~l--~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~ 110 (368)
T PRK13479 35 FNALTASVRAKLVAI--ATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLD 110 (368)
T ss_pred HHHHHHHHHHHHHHH--hCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEE
Confidence 544444443333323 255555455555555 455666666666666544433333333334566677787777664
No 397
>PRK08526 threonine dehydratase; Provisional
Probab=20.39 E-value=4.6e+02 Score=25.23 Aligned_cols=92 Identities=12% Similarity=0.018 Sum_probs=53.1
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
.++.+-.++.+..-||++=-. .+++.+...+ +..+| | +....+-....+.++|.++|..+..+-|...+..-...
T Consensus 35 ~~iylK~E~lqptGSfK~RgA-~n~i~~l~~~-~~~~g--V-V~aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~ 109 (403)
T PRK08526 35 AEVYLKKENLQITGAYKIRGA-YNKIANLSEE-QKQHG--V-IAASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSG 109 (403)
T ss_pred CeEEEEecCCCCCCCCHHHHH-HHHHHhccHh-hcCCE--E-EEECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHH
Confidence 355555554334556554221 2223222222 11222 3 44555667777888999999865555555544444566
Q ss_pred HHhcCCeEEEEccccHH
Q 013850 122 VKDSNPKLVITVPELWD 138 (435)
Q Consensus 122 l~~~~~~~vi~~~~~~~ 138 (435)
++..+++++++.....+
T Consensus 110 ~r~~GA~Vv~~g~~~~~ 126 (403)
T PRK08526 110 TKALGAEVILKGDNYDE 126 (403)
T ss_pred HHhCCCEEEEECCCHHH
Confidence 89999999999865433
No 398
>PRK06815 hypothetical protein; Provisional
Probab=20.34 E-value=6.8e+02 Score=23.00 Aligned_cols=91 Identities=11% Similarity=-0.001 Sum_probs=51.9
Q ss_pred CceeeeecCCCcceeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 013850 42 SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (435)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~ 121 (435)
-++.+-.++.+..-||++-... .....|.... ....| +....+-.-....++|..+|..+..+-|..........
T Consensus 35 ~~i~~K~E~~nptgS~KdR~a~--~~~~~l~~~~--~~~~v-v~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 109 (317)
T PRK06815 35 CEVYLKCEHLQHTGSFKFRGAS--NKLRLLNEAQ--RQQGV-ITASSGNHGQGVALAAKLAGIPVTVYAPEQASAIKLDA 109 (317)
T ss_pred CeEEEEecCCCCCCCcHHHHHH--HHHHhcchhh--cCceE-EEECCChHHHHHHHHHHHhCCCEEEEECCCCCHHHHHH
Confidence 3555555544445666553222 1112222111 12223 34555666777788888999855544444444555678
Q ss_pred HHhcCCeEEEEccccH
Q 013850 122 VKDSNPKLVITVPELW 137 (435)
Q Consensus 122 l~~~~~~~vi~~~~~~ 137 (435)
++..++++++++.+..
T Consensus 110 ~~~~GA~V~~~~~~~~ 125 (317)
T PRK06815 110 IRALGAEVRLYGGDAL 125 (317)
T ss_pred HHHCCCEEEEECCCHH
Confidence 8999999999987543
No 399
>PF08845 SymE_toxin: Toxin SymE, type I toxin-antitoxin system; InterPro: IPR014944 This entry represents a SOS-induced gene whose product shows homology to the antitoxin MazE (SymE), the coding region contains a cis-encoded antisense RNA. The small antisense RNA and the gene have the all the hallmarks of a toxin-antitoxin module. The synthesis of the SymE is tightly repressed at multiple levels; at the transcriptional level by the LexA repressor, at the level of mRNA stability and translation by the SymR RNA and at the level of protein stability by the Lon protease. SymE co-purifies with ribosomes and overproduction of the protein leads to cell growth inhibition, decreased protein synthesis and increased RNA degradation. These properties are shared with several RNA endonuclease toxins of toxin-antitoxin modules. It seems probable that the SymE protein represents an evolutionary derivative of a toxin containing the AbrB fold, whose representatives are typically antitoxins. The SymE promoted cleavage of RNA cleavage may be important for the recycling of RNAs damaged under SOS-inducing conditions []. ; GO: 0003723 RNA binding, 0016788 hydrolase activity, acting on ester bonds, 0016070 RNA metabolic process, 0005737 cytoplasm
Probab=20.30 E-value=1.1e+02 Score=19.94 Aligned_cols=22 Identities=18% Similarity=0.116 Sum_probs=17.9
Q ss_pred HHHHHhCCCCCCCEEEEEcCCC
Q 013850 68 SHSFRHLGITKKDVVLIFAPNS 89 (435)
Q Consensus 68 a~~L~~~g~~~gd~V~l~~~~~ 89 (435)
+.+|.+.|+..|+.|-|-..++
T Consensus 30 G~WL~~aGF~~G~~v~V~v~~g 51 (57)
T PF08845_consen 30 GKWLEEAGFTIGDPVKVRVMPG 51 (57)
T ss_pred hhhhHHhCCCCCCEEEEEEECC
Confidence 5788899999999988876554
No 400
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=20.22 E-value=3.8e+02 Score=20.08 Aligned_cols=44 Identities=11% Similarity=0.015 Sum_probs=35.6
Q ss_pred HHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCeEEEEcccc
Q 013850 93 PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (435)
Q Consensus 93 ~~~~lA~~~~G~~~v~i~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (435)
..+...+-..|..++.+.+..+.+.+...+.+.+|++|..+...
T Consensus 17 ~~~~~~l~~~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~ 60 (125)
T cd02065 17 NIVAIALRDNGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALS 60 (125)
T ss_pred HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecch
Confidence 34444566779999999999999999999999999999987543
No 401
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=20.14 E-value=4.5e+02 Score=20.86 Aligned_cols=93 Identities=6% Similarity=0.046 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhC---CCCCCCEEEEEcCC-C-CcHHHHHHHHHHcCcEEEecCCCCC-------HHHHHHHHHhcCC
Q 013850 60 FKSIVIKVSHSFRHL---GITKKDVVLIFAPN-S-IHFPICFLGVIAIGAIASTANPVYT-------VSELSKQVKDSNP 127 (435)
Q Consensus 60 l~~~~~~la~~L~~~---g~~~gd~V~l~~~~-~-~~~~~~~lA~~~~G~~~v~i~~~~~-------~~~~~~~l~~~~~ 127 (435)
|.+.+..+-....+. ..-+|..|++++.. | .--+....|+.++|+.++-+++..+ ......++... +
T Consensus 17 ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~-~ 95 (142)
T PF02729_consen 17 LLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY-V 95 (142)
T ss_dssp HHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-C
T ss_pred HHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-h
Confidence 444455554444432 34566666666554 4 4455667889999999999886543 35556677888 7
Q ss_pred eEEEEccccHHHHhhcC--CCcEEeccC
Q 013850 128 KLVITVPELWDKVKDLN--LPAVLLGSK 153 (435)
Q Consensus 128 ~~vi~~~~~~~~~~~~~--~~~~~~~~~ 153 (435)
+++++-...-..+.... ..+.+++..
T Consensus 96 D~iv~R~~~~~~~~~~a~~~~vPVINa~ 123 (142)
T PF02729_consen 96 DAIVIRHPSHGALEELAEHSSVPVINAG 123 (142)
T ss_dssp SEEEEEESSHHHHHHHHHHCSSEEEEEE
T ss_pred heEEEEeccchHHHHHHHhccCCeEcCc
Confidence 77776543333332221 345555543
No 402
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=20.11 E-value=3.1e+02 Score=26.34 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=32.6
Q ss_pred CCCCCEEEEEcCCCCcHHHHHH---------HHHHcCcEEEecCCC---CCHHHHHHHHHhcCCeEEEEcccc
Q 013850 76 ITKKDVVLIFAPNSIHFPICFL---------GVIAIGAIASTANPV---YTVSELSKQVKDSNPKLVITVPEL 136 (435)
Q Consensus 76 ~~~gd~V~l~~~~~~~~~~~~l---------A~~~~G~~~v~i~~~---~~~~~~~~~l~~~~~~~vi~~~~~ 136 (435)
++|||+|.-+....=.++..-. .-...-.+..+++++ .+.++++.++++.+|++|++..+.
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~ 179 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASS 179 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SS
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchh
Confidence 4788887776655432221111 222233555667743 357999999999999999998653
No 403
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=20.01 E-value=6.6e+02 Score=23.07 Aligned_cols=59 Identities=20% Similarity=0.265 Sum_probs=33.8
Q ss_pred HHhCCCCCCCEEEEEcCCCCcHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 013850 71 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (435)
Q Consensus 71 L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~~~~~l~~~~~~~vi~~ 133 (435)
++..++++||.|.+-.+. +.....++...|+.++.++.. .+.+.+...++ -++++|+..
T Consensus 50 l~~l~~~~gd~vl~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~ 113 (352)
T cd00616 50 LRALGIGPGDEVIVPSFT---FVATANAILLLGATPVFVDIDPDTYNIDPELIEAAIT-PRTKAIIPV 113 (352)
T ss_pred HHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcC-cCCeEEEEE
Confidence 344456789977654433 334455667778766655332 24566666653 356666654
Done!