Query 013851
Match_columns 435
No_of_seqs 300 out of 1906
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 08:01:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013851.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013851hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02851 3-hydroxyisobutyryl-C 100.0 3.9E-68 8.5E-73 539.3 39.4 351 64-434 40-397 (407)
2 KOG1684 Enoyl-CoA hydratase [L 100.0 7.1E-69 1.5E-73 517.0 29.8 353 65-435 37-393 (401)
3 PLN02988 3-hydroxyisobutyryl-C 100.0 6.4E-68 1.4E-72 536.2 37.0 344 66-429 9-359 (381)
4 PLN02157 3-hydroxyisobutyryl-C 100.0 4.1E-67 8.9E-72 532.0 38.0 350 65-434 36-392 (401)
5 PLN02874 3-hydroxyisobutyryl-C 100.0 2.5E-64 5.4E-69 511.7 35.5 346 63-428 8-358 (379)
6 PRK05617 3-hydroxyisobutyryl-C 100.0 1.3E-64 2.8E-69 507.9 32.0 337 66-425 3-342 (342)
7 KOG1680 Enoyl-CoA hydratase [L 100.0 1E-54 2.2E-59 407.9 21.3 255 65-408 35-289 (290)
8 PRK09076 enoyl-CoA hydratase; 100.0 1.5E-53 3.3E-58 413.1 29.7 254 67-408 4-257 (258)
9 PLN02600 enoyl-CoA hydratase 100.0 1.1E-53 2.3E-58 412.5 28.3 250 74-409 2-251 (251)
10 PRK05809 3-hydroxybutyryl-CoA 100.0 1.5E-53 3.2E-58 413.6 29.3 259 64-409 2-260 (260)
11 PRK05980 enoyl-CoA hydratase; 100.0 1.5E-53 3.3E-58 413.6 28.9 254 67-406 4-260 (260)
12 PRK06127 enoyl-CoA hydratase; 100.0 1.9E-53 4.2E-58 414.7 29.5 260 64-409 9-269 (269)
13 PRK05862 enoyl-CoA hydratase; 100.0 2E-53 4.3E-58 412.1 29.1 255 65-409 3-257 (257)
14 PRK07657 enoyl-CoA hydratase; 100.0 1.9E-53 4.1E-58 412.9 28.9 258 66-409 3-260 (260)
15 PRK08150 enoyl-CoA hydratase; 100.0 2.8E-53 6E-58 410.4 29.2 254 66-409 2-255 (255)
16 PRK06142 enoyl-CoA hydratase; 100.0 2.9E-53 6.3E-58 414.2 28.9 257 65-408 5-272 (272)
17 PRK06494 enoyl-CoA hydratase; 100.0 4.2E-53 9.1E-58 410.2 28.7 255 64-408 2-258 (259)
18 PRK08139 enoyl-CoA hydratase; 100.0 5.6E-53 1.2E-57 410.7 29.6 259 63-409 8-266 (266)
19 PRK07658 enoyl-CoA hydratase; 100.0 4.5E-53 9.7E-58 409.6 28.8 254 67-408 3-256 (257)
20 PLN02664 enoyl-CoA hydratase/d 100.0 5.6E-53 1.2E-57 412.7 29.1 250 73-408 14-274 (275)
21 PRK09674 enoyl-CoA hydratase-i 100.0 5.7E-53 1.2E-57 408.4 28.7 252 67-408 3-254 (255)
22 PRK07799 enoyl-CoA hydratase; 100.0 6.9E-53 1.5E-57 409.6 28.9 258 65-409 4-263 (263)
23 TIGR02280 PaaB1 phenylacetate 100.0 1.1E-52 2.4E-57 406.7 28.5 252 69-408 2-255 (256)
24 PRK08140 enoyl-CoA hydratase; 100.0 1.4E-52 3.1E-57 407.2 29.4 257 64-408 2-261 (262)
25 PRK08138 enoyl-CoA hydratase; 100.0 1.4E-52 3.1E-57 406.9 29.4 256 64-408 5-260 (261)
26 PRK05995 enoyl-CoA hydratase; 100.0 1.4E-52 3.1E-57 407.2 28.5 258 64-409 2-262 (262)
27 PRK08252 enoyl-CoA hydratase; 100.0 1.9E-52 4.2E-57 404.5 28.9 251 66-408 3-253 (254)
28 PRK06563 enoyl-CoA hydratase; 100.0 1.1E-52 2.3E-57 406.5 27.0 252 69-408 2-254 (255)
29 PRK06143 enoyl-CoA hydratase; 100.0 1.7E-52 3.7E-57 405.2 28.4 250 65-400 5-254 (256)
30 TIGR01929 menB naphthoate synt 100.0 1.2E-52 2.7E-57 406.9 27.1 256 67-408 3-258 (259)
31 PRK07468 enoyl-CoA hydratase; 100.0 2.3E-52 4.9E-57 405.7 28.6 257 65-408 3-261 (262)
32 PRK09245 enoyl-CoA hydratase; 100.0 2.3E-52 5E-57 406.6 28.2 255 67-408 4-265 (266)
33 PRK08258 enoyl-CoA hydratase; 100.0 3.4E-52 7.4E-57 407.5 29.4 255 67-408 18-276 (277)
34 PRK05981 enoyl-CoA hydratase; 100.0 3.2E-52 7E-57 405.6 28.6 258 64-408 2-265 (266)
35 PRK07659 enoyl-CoA hydratase; 100.0 2.8E-52 6E-57 404.7 27.9 257 64-409 4-260 (260)
36 PRK06144 enoyl-CoA hydratase; 100.0 3.5E-52 7.6E-57 404.3 28.1 255 64-408 6-261 (262)
37 PRK05674 gamma-carboxygeranoyl 100.0 2.7E-52 5.8E-57 405.7 27.2 258 64-408 3-263 (265)
38 TIGR03210 badI 2-ketocyclohexa 100.0 3.1E-52 6.7E-57 403.4 27.6 255 65-408 1-255 (256)
39 PRK07327 enoyl-CoA hydratase; 100.0 5.1E-52 1.1E-56 404.5 28.3 258 64-408 9-267 (268)
40 PRK11423 methylmalonyl-CoA dec 100.0 5.8E-52 1.3E-56 402.5 27.2 258 64-409 2-261 (261)
41 PRK03580 carnitinyl-CoA dehydr 100.0 9.1E-52 2E-56 401.3 28.5 253 67-408 4-260 (261)
42 PRK07511 enoyl-CoA hydratase; 100.0 1.2E-51 2.7E-56 400.2 28.9 253 68-407 5-259 (260)
43 PRK09120 p-hydroxycinnamoyl Co 100.0 1.3E-51 2.8E-56 402.9 29.1 251 64-400 6-262 (275)
44 PRK05864 enoyl-CoA hydratase; 100.0 9.8E-52 2.1E-56 404.1 28.1 260 64-409 7-275 (276)
45 PRK06210 enoyl-CoA hydratase; 100.0 8E-52 1.7E-56 404.1 27.3 259 63-408 2-271 (272)
46 PRK06495 enoyl-CoA hydratase; 100.0 1.4E-51 3E-56 399.2 28.4 254 64-408 2-256 (257)
47 PRK07396 dihydroxynaphthoic ac 100.0 1.5E-51 3.2E-56 402.2 27.9 257 64-408 11-268 (273)
48 PRK06688 enoyl-CoA hydratase; 100.0 1.9E-51 4.2E-56 398.6 27.6 254 66-408 5-258 (259)
49 PRK08260 enoyl-CoA hydratase; 100.0 2.4E-51 5.3E-56 405.1 27.7 259 65-409 3-278 (296)
50 PLN02888 enoyl-CoA hydratase 100.0 4.6E-51 9.9E-56 397.0 28.7 256 63-408 6-263 (265)
51 PLN02921 naphthoate synthase 100.0 1.2E-50 2.7E-55 403.4 28.9 258 64-408 63-322 (327)
52 COG1024 CaiD Enoyl-CoA hydrata 100.0 1.3E-50 2.8E-55 392.4 28.0 253 65-406 4-257 (257)
53 PRK07509 enoyl-CoA hydratase; 100.0 1.6E-50 3.5E-55 392.8 28.7 254 65-407 2-261 (262)
54 PRK07260 enoyl-CoA hydratase; 100.0 1.3E-50 2.7E-55 392.1 27.6 249 66-400 2-253 (255)
55 PRK06072 enoyl-CoA hydratase; 100.0 3E-50 6.5E-55 387.8 29.1 247 68-409 2-248 (248)
56 PRK07938 enoyl-CoA hydratase; 100.0 1.7E-50 3.8E-55 389.6 26.5 246 69-404 4-249 (249)
57 TIGR03189 dienoyl_CoA_hyt cycl 100.0 3.5E-50 7.5E-55 387.9 28.4 248 68-409 3-251 (251)
58 PRK08259 enoyl-CoA hydratase; 100.0 1.6E-50 3.4E-55 391.0 26.0 249 67-405 4-252 (254)
59 PRK05870 enoyl-CoA hydratase; 100.0 2.2E-50 4.8E-55 389.0 25.1 244 66-397 3-247 (249)
60 PRK06023 enoyl-CoA hydratase; 100.0 4E-50 8.7E-55 387.6 26.1 243 67-397 4-249 (251)
61 PRK12478 enoyl-CoA hydratase; 100.0 3E-50 6.5E-55 397.2 25.4 258 64-411 3-283 (298)
62 PRK07854 enoyl-CoA hydratase; 100.0 5.6E-50 1.2E-54 384.7 26.1 241 68-408 2-242 (243)
63 PRK07827 enoyl-CoA hydratase; 100.0 1.4E-49 2.9E-54 385.9 28.1 253 65-407 5-259 (260)
64 PLN03214 probable enoyl-CoA hy 100.0 9.1E-50 2E-54 390.2 26.8 252 64-400 9-263 (278)
65 PF00378 ECH: Enoyl-CoA hydrat 100.0 6E-50 1.3E-54 385.0 22.9 244 70-400 2-245 (245)
66 PRK08321 naphthoate synthase; 100.0 3.7E-49 8E-54 390.3 28.1 259 65-409 22-298 (302)
67 PRK07112 polyketide biosynthes 100.0 5.5E-49 1.2E-53 380.5 27.3 251 65-408 3-254 (255)
68 PRK07110 polyketide biosynthes 100.0 3.1E-48 6.7E-53 374.0 27.2 244 65-397 4-247 (249)
69 PRK06190 enoyl-CoA hydratase; 100.0 6.7E-48 1.4E-52 373.2 27.5 246 64-397 2-250 (258)
70 PRK08184 benzoyl-CoA-dihydrodi 100.0 1.8E-47 3.9E-52 402.3 25.6 261 64-410 258-549 (550)
71 TIGR03222 benzo_boxC benzoyl-C 100.0 3.5E-47 7.5E-52 399.0 26.2 260 64-410 254-545 (546)
72 KOG1679 Enoyl-CoA hydratase [L 100.0 1.1E-46 2.4E-51 339.7 17.1 262 66-409 27-291 (291)
73 PRK05869 enoyl-CoA hydratase; 100.0 8.9E-46 1.9E-50 350.8 22.8 188 65-257 2-193 (222)
74 PRK08290 enoyl-CoA hydratase; 100.0 5E-45 1.1E-49 358.5 26.3 239 64-388 2-262 (288)
75 PRK11730 fadB multifunctional 100.0 1E-44 2.3E-49 395.1 28.3 287 67-399 7-296 (715)
76 PRK08788 enoyl-CoA hydratase; 100.0 7.2E-44 1.6E-48 348.9 28.0 250 63-397 12-274 (287)
77 KOG1681 Enoyl-CoA isomerase [L 100.0 1.8E-45 3.8E-50 334.8 15.1 260 64-407 17-290 (292)
78 PRK11154 fadJ multifunctional 100.0 1.1E-43 2.4E-48 387.0 28.7 285 68-400 7-294 (708)
79 PRK08272 enoyl-CoA hydratase; 100.0 1E-43 2.2E-48 351.7 25.8 188 64-258 8-219 (302)
80 TIGR03200 dearomat_oah 6-oxocy 100.0 2.8E-43 6.1E-48 348.5 28.3 284 77-398 38-327 (360)
81 PRK06213 enoyl-CoA hydratase; 100.0 2E-43 4.4E-48 336.5 22.7 224 66-379 3-227 (229)
82 TIGR02440 FadJ fatty oxidation 100.0 1.2E-42 2.7E-47 378.0 30.6 281 70-400 4-289 (699)
83 TIGR02437 FadB fatty oxidation 100.0 2.5E-42 5.4E-47 375.8 29.1 289 67-400 7-297 (714)
84 COG0447 MenB Dihydroxynaphthoi 100.0 6.9E-43 1.5E-47 315.7 11.8 257 63-407 15-276 (282)
85 TIGR02441 fa_ox_alpha_mit fatt 100.0 6.9E-41 1.5E-45 365.2 28.4 296 62-400 9-321 (737)
86 PLN02267 enoyl-CoA hydratase/i 100.0 2E-40 4.4E-45 317.6 22.8 184 68-256 2-190 (239)
87 KOG0016 Enoyl-CoA hydratase/is 100.0 1.2E-39 2.6E-44 303.4 22.5 252 64-400 5-263 (266)
88 KOG1682 Enoyl-CoA isomerase [L 100.0 3E-39 6.4E-44 289.5 19.8 255 66-408 32-286 (287)
89 cd06558 crotonase-like Crotona 100.0 3.4E-38 7.3E-43 292.4 20.1 191 69-263 2-193 (195)
90 TIGR03222 benzo_boxC benzoyl-C 100.0 1.6E-37 3.5E-42 326.1 22.0 199 63-264 8-225 (546)
91 PRK08184 benzoyl-CoA-dihydrodi 100.0 7.2E-37 1.6E-41 322.1 21.5 199 63-264 12-229 (550)
92 PF13766 ECH_C: 2-enoyl-CoA Hy 99.9 2.5E-24 5.4E-29 183.7 11.1 117 291-424 2-118 (118)
93 cd07014 S49_SppA Signal peptid 99.8 4.3E-19 9.2E-24 162.6 10.8 141 95-255 23-173 (177)
94 cd07020 Clp_protease_NfeD_1 No 99.8 4E-18 8.7E-23 157.5 12.5 145 78-252 2-166 (187)
95 cd07019 S49_SppA_1 Signal pept 99.6 1.7E-15 3.7E-20 142.6 9.6 102 77-196 2-105 (211)
96 cd07022 S49_Sppa_36K_type Sign 99.5 3.7E-13 8.1E-18 127.0 14.2 98 83-199 13-111 (214)
97 cd00394 Clp_protease_like Case 99.5 4.1E-13 8.8E-18 120.9 12.2 135 91-248 8-161 (161)
98 TIGR00705 SppA_67K signal pept 99.5 1.8E-13 3.8E-18 146.7 9.9 155 74-250 307-510 (584)
99 cd07016 S14_ClpP_1 Caseinolyti 99.4 7.6E-13 1.6E-17 119.2 11.1 130 94-248 15-160 (160)
100 cd07023 S49_Sppa_N_C Signal pe 99.4 1.8E-12 3.9E-17 121.8 11.9 100 77-196 2-101 (208)
101 TIGR00706 SppA_dom signal pept 99.3 4.6E-11 9.9E-16 112.2 14.0 136 96-255 15-199 (207)
102 cd07018 S49_SppA_67K_type Sign 99.2 1.7E-10 3.6E-15 109.6 11.1 91 90-199 25-115 (222)
103 cd07021 Clp_protease_NfeD_like 99.2 3.8E-10 8.2E-15 103.4 12.5 135 90-251 9-171 (178)
104 KOG1683 Hydroxyacyl-CoA dehydr 98.8 5.5E-09 1.2E-13 103.3 5.9 171 75-251 65-240 (380)
105 cd07015 Clp_protease_NfeD Nodu 98.5 2E-06 4.3E-11 78.3 13.1 139 90-251 9-165 (172)
106 cd07013 S14_ClpP Caseinolytic 98.5 1.2E-06 2.6E-11 79.2 11.1 136 91-248 9-162 (162)
107 PRK10949 protease 4; Provision 98.4 5.7E-06 1.2E-10 89.4 16.0 159 74-256 325-534 (618)
108 PRK00277 clpP ATP-dependent Cl 98.3 2.8E-06 6.1E-11 79.4 10.2 139 89-251 38-196 (200)
109 PRK12319 acetyl-CoA carboxylas 98.3 0.00011 2.3E-09 71.1 20.5 140 88-252 76-215 (256)
110 PLN03230 acetyl-coenzyme A car 98.2 0.00021 4.6E-09 72.7 19.9 138 89-251 200-337 (431)
111 PRK12553 ATP-dependent Clp pro 98.2 2.2E-05 4.8E-10 73.8 12.1 138 90-251 43-202 (207)
112 cd07017 S14_ClpP_2 Caseinolyti 98.2 1.6E-05 3.5E-10 72.4 10.9 134 91-248 18-171 (171)
113 CHL00198 accA acetyl-CoA carbo 98.2 0.00031 6.7E-09 69.7 20.4 139 88-251 132-270 (322)
114 TIGR00513 accA acetyl-CoA carb 98.1 0.00038 8.2E-09 69.0 20.5 139 88-251 129-267 (316)
115 PLN03229 acetyl-coenzyme A car 98.1 0.00052 1.1E-08 74.1 21.2 139 88-251 220-358 (762)
116 PRK05724 acetyl-CoA carboxylas 98.0 0.00065 1.4E-08 67.5 19.9 139 88-251 129-267 (319)
117 PRK11778 putative inner membra 98.0 6.2E-05 1.3E-09 75.2 12.2 157 74-255 89-290 (330)
118 PRK14512 ATP-dependent Clp pro 98.0 0.00012 2.7E-09 68.1 13.1 137 91-251 32-188 (197)
119 PF00574 CLP_protease: Clp pro 98.0 2E-05 4.3E-10 72.4 7.5 137 91-251 25-181 (182)
120 PF01972 SDH_sah: Serine dehyd 97.9 0.00032 6.9E-09 67.6 15.0 109 74-209 58-166 (285)
121 CHL00028 clpP ATP-dependent Cl 97.9 0.00016 3.6E-09 67.4 12.1 139 90-252 38-197 (200)
122 COG0616 SppA Periplasmic serin 97.9 0.00015 3.3E-09 72.5 12.3 136 96-253 82-264 (317)
123 TIGR00493 clpP ATP-dependent C 97.8 0.00027 5.8E-09 65.6 12.2 137 90-250 34-190 (191)
124 TIGR03133 malonate_beta malona 97.7 0.0021 4.5E-08 62.7 17.4 153 76-253 60-219 (274)
125 PRK12551 ATP-dependent Clp pro 97.6 0.0011 2.3E-08 61.8 12.6 139 90-252 33-191 (196)
126 PRK14513 ATP-dependent Clp pro 97.5 0.0014 3.1E-08 61.1 12.4 138 89-253 34-194 (201)
127 PRK14514 ATP-dependent Clp pro 97.5 0.0014 3E-08 62.0 12.4 138 89-251 61-219 (221)
128 PRK07189 malonate decarboxylas 97.5 0.0021 4.7E-08 63.4 13.5 108 76-196 69-182 (301)
129 PRK05654 acetyl-CoA carboxylas 97.4 0.0064 1.4E-07 60.0 16.4 155 74-260 119-275 (292)
130 TIGR00515 accD acetyl-CoA carb 97.4 0.0067 1.5E-07 59.6 15.6 152 77-260 122-274 (285)
131 TIGR03134 malonate_gamma malon 97.2 0.014 3.1E-07 55.9 15.8 155 75-254 31-192 (238)
132 TIGR00705 SppA_67K signal pept 97.2 0.005 1.1E-07 66.7 13.5 86 94-197 76-161 (584)
133 PF01343 Peptidase_S49: Peptid 97.1 0.00037 8.1E-09 62.3 2.9 96 158-256 3-145 (154)
134 CHL00174 accD acetyl-CoA carbo 96.9 0.038 8.2E-07 54.4 15.0 153 77-261 135-289 (296)
135 PRK10949 protease 4; Provision 96.8 0.014 2.9E-07 63.6 12.9 86 94-197 95-180 (618)
136 COG1030 NfeD Membrane-bound se 96.8 0.023 5E-07 58.4 13.5 150 74-251 25-188 (436)
137 PRK12552 ATP-dependent Clp pro 96.7 0.03 6.5E-07 53.0 12.7 144 90-251 48-214 (222)
138 TIGR01117 mmdA methylmalonyl-C 96.6 0.084 1.8E-06 56.3 17.0 161 75-256 314-486 (512)
139 COG0740 ClpP Protease subunit 96.5 0.043 9.4E-07 50.9 12.2 99 153-253 77-194 (200)
140 PF01039 Carboxyl_trans: Carbo 96.3 0.041 8.8E-07 58.5 11.9 140 77-252 59-206 (493)
141 COG0825 AccA Acetyl-CoA carbox 95.9 0.047 1E-06 53.1 9.2 87 153-251 180-266 (317)
142 PLN02820 3-methylcrotonyl-CoA 95.9 0.12 2.5E-06 55.8 13.2 109 77-195 131-240 (569)
143 TIGR01117 mmdA methylmalonyl-C 95.3 0.2 4.4E-06 53.4 12.4 102 77-192 84-185 (512)
144 COG0777 AccD Acetyl-CoA carbox 95.3 0.84 1.8E-05 44.3 15.0 146 77-256 124-272 (294)
145 PLN02157 3-hydroxyisobutyryl-C 93.3 0.15 3.3E-06 52.7 5.8 68 332-411 228-298 (401)
146 COG4799 Acetyl-CoA carboxylase 93.1 0.29 6.3E-06 51.8 7.7 101 78-192 93-194 (526)
147 PLN02820 3-methylcrotonyl-CoA 90.4 3.7 7.9E-05 44.5 12.5 146 89-255 380-544 (569)
148 PF01039 Carboxyl_trans: Carbo 83.7 6.4 0.00014 41.9 9.7 161 75-256 293-469 (493)
149 KOG0840 ATP-dependent Clp prot 82.8 7.3 0.00016 37.6 8.5 132 89-250 99-256 (275)
150 PF02601 Exonuc_VII_L: Exonucl 80.5 4 8.6E-05 40.7 6.3 57 94-168 55-114 (319)
151 COG1570 XseA Exonuclease VII, 74.4 6.6 0.00014 40.9 5.9 56 95-168 177-232 (440)
152 TIGR00237 xseA exodeoxyribonuc 71.7 6.4 0.00014 41.2 5.2 59 92-168 168-226 (432)
153 PRK00286 xseA exodeoxyribonucl 67.5 11 0.00023 39.5 5.9 57 93-168 175-231 (438)
154 PF13607 Succ_CoA_lig: Succiny 67.2 13 0.00028 32.6 5.4 52 98-172 41-92 (138)
155 COG0074 SucD Succinyl-CoA synt 66.5 16 0.00035 35.8 6.3 52 100-173 189-240 (293)
156 COG4799 Acetyl-CoA carboxylase 62.3 60 0.0013 34.8 10.1 160 77-254 326-497 (526)
157 PTZ00187 succinyl-CoA syntheta 61.1 21 0.00045 35.8 6.2 52 99-172 212-263 (317)
158 PLN02522 ATP citrate (pro-S)-l 53.6 35 0.00077 37.3 6.9 52 99-173 210-262 (608)
159 KOG0540 3-Methylcrotonyl-CoA c 52.7 1.2E+02 0.0027 31.8 10.1 151 79-255 352-511 (536)
160 smart00250 PLEC Plectin repeat 39.7 23 0.0005 23.5 1.9 18 229-247 18-35 (38)
161 COG0793 Prc Periplasmic protea 35.9 31 0.00068 35.8 3.0 94 77-182 205-308 (406)
162 TIGR02717 AcCoA-syn-alpha acet 35.7 32 0.00069 36.2 3.1 84 97-204 189-272 (447)
163 PLN00125 Succinyl-CoA ligase [ 30.8 1E+02 0.0022 30.7 5.5 24 98-121 192-215 (300)
164 PF00549 Ligase_CoA: CoA-ligas 30.0 1E+02 0.0022 27.5 4.9 57 98-174 60-121 (153)
165 PRK05678 succinyl-CoA syntheta 29.0 1E+02 0.0022 30.5 5.2 24 98-121 187-210 (291)
166 TIGR01019 sucCoAalpha succinyl 28.7 1E+02 0.0022 30.5 5.1 24 98-121 185-208 (286)
167 PF00681 Plectin: Plectin repe 26.7 24 0.00053 24.4 0.3 20 228-248 17-36 (45)
168 PRK06091 membrane protein FdrA 26.5 1.8E+02 0.0038 31.6 6.7 35 385-420 517-551 (555)
169 COG4565 CitB Response regulato 26.3 4E+02 0.0086 25.3 8.2 57 204-261 56-114 (224)
170 PLN00049 carboxyl-terminal pro 24.3 24 0.00052 36.4 -0.2 101 75-182 194-300 (389)
171 PF06258 Mito_fiss_Elm1: Mitoc 24.1 7.2E+02 0.016 24.7 10.6 131 63-199 96-245 (311)
172 KOG1255 Succinyl-CoA synthetas 23.5 1.8E+02 0.0039 28.2 5.4 71 76-172 203-273 (329)
173 PF03464 eRF1_2: eRF1 domain 2 22.4 1.4E+02 0.0031 25.6 4.3 45 77-121 25-83 (133)
174 COG3660 Predicted nucleoside-d 20.8 6.7E+02 0.015 24.8 8.8 114 78-193 130-255 (329)
175 smart00870 Asparaginase Aspara 20.2 3.3E+02 0.0071 27.3 7.0 31 89-119 55-85 (323)
No 1
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=3.9e-68 Score=539.27 Aligned_cols=351 Identities=34% Similarity=0.602 Sum_probs=305.6
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc---h
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ---L 140 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~---~ 140 (435)
..+.|.++. .+++++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.| ++||+|+|++++..... .
T Consensus 40 ~~~~v~~e~-~~~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~G-kaFcAGgDl~~l~~~~~~~~~ 117 (407)
T PLN02851 40 LQDQVLVEG-RAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSG-RAFCSGADVVSLYHLINEGNV 117 (407)
T ss_pred CCCCeEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccCCcCHHHHHhhccccch
Confidence 345677876 689999999999999999999999999999999999999999999998 89999999999865321 1
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCch
Q 013851 141 SEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 220 (435)
Q Consensus 141 ~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 220 (435)
+....++..+++++..|.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.
T Consensus 118 ~~~~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~- 196 (407)
T PLN02851 118 EECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGY- 196 (407)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCH-
Confidence 2344567778888889999999999999999999999999999999999999999999999999999999999999994
Q ss_pred HHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCC-CCCchhhhhhhHHH
Q 013851 221 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP-EGEAPLKLLLPQIT 299 (435)
Q Consensus 221 ~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~ 299 (435)
.+++|+|||++++ |+||+++||++++||++++....+.+.+.. ..+...+..+|++|...+ .....+......|+
T Consensus 197 -~g~~L~LTG~~i~-a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~ 272 (407)
T PLN02851 197 -LGEYLALTGQKLN-GVEMIACGLATHYCLNARLPLIEERLGKLL--TDDPAVIEDSLAQYGDLVYPDKSSVLHKIETID 272 (407)
T ss_pred -HHHHHHHhCCcCC-HHHHHHCCCceeecCHhhHHHHHHHHHhhc--cCCHHHHHHHHHHhccccCCCcccHHHHHHHHH
Confidence 6999999999999 999999999999999999866555554432 234556889999997542 22234445588999
Q ss_pred hhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHH
Q 013851 300 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 379 (435)
Q Consensus 300 ~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~ 379 (435)
+||+.+ |+++|+++|+.+.+.. ..+||+++++.|.++||+|+++|+++++++. ..++.+||++|+++
T Consensus 273 ~~F~~~-sv~~I~~~L~~~~~~~---~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~---------~~sl~e~l~~E~~l 339 (407)
T PLN02851 273 KCFGHD-TVEEIIEALENEAASS---YDEWCKKALKKIKEASPLSLKVTLQSIREGR---------FQTLDQCLAREYRI 339 (407)
T ss_pred HHhCCC-CHHHHHHHHHhccccc---chHHHHHHHHHHHhcCcHHHHHHHHHHHHHh---------cCCHHHHHHHHHHH
Confidence 999988 9999999999753210 1489999999999999999999999999987 67999999999999
Q ss_pred HHHhC---CCchHHHHHHHHHhcCCCCCCCCCCCcCCCCHHHHHhcccCCCCCCCCCC
Q 013851 380 ALRSS---LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELK 434 (435)
Q Consensus 380 ~~~~~---~s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~~~~~~~~~~~ 434 (435)
..+++ .++||.|||||.|+||+++|+|+|++++||+++.|++||.|++.+.-+|+
T Consensus 340 ~~~~~~~~~~~DF~EGVRA~LIDKd~~P~W~p~sl~~V~~~~v~~~f~~~~~~~~~l~ 397 (407)
T PLN02851 340 SLCGVSKWVSGDFCEGVRARLVDKDFAPKWDPPSLGEVSKDMVDCYFTPLDESESELE 397 (407)
T ss_pred HHHHHhcCccchHHHHHHHHhcCCCCCCCCCCCChhhCCHHHHHHHhCCCCCCccccc
Confidence 99987 48999999999999999999999999999999999999999864322454
No 2
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=7.1e-69 Score=517.01 Aligned_cols=353 Identities=49% Similarity=0.795 Sum_probs=326.3
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh---chh
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN---QLS 141 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~---~~~ 141 (435)
.+.|.++. ++....||||||+++||||.+|+..+...|..|+.++.+++||+.|+|+++||+|+|++...... ...
T Consensus 37 ~~~VL~e~-~~~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d~~~~ 115 (401)
T KOG1684|consen 37 KDQVLVEG-KGCARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKDKETP 115 (401)
T ss_pred CCceEEec-CCceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhcCCch
Confidence 46788885 78999999999999999999999999999999999999999999999889999999999665543 233
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchH
Q 013851 142 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 221 (435)
Q Consensus 142 ~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 221 (435)
....+|...|.+...|.++.||+||.+||..||||++|+.+.-||||||++.|+|||+.||++||+|++|+++|++| .
T Consensus 116 ~~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg--~ 193 (401)
T KOG1684|consen 116 EVKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPG--Y 193 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCcc--H
Confidence 55779999999999999999999999999999999999999999999999999999999999999999999999999 4
Q ss_pred HHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCc-hhhhhhhHHHh
Q 013851 222 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEA-PLKLLLPQITS 300 (435)
Q Consensus 222 ~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~i~~ 300 (435)
.+.||.|||.+++ +.||+..||++|+||.+++..+.++|. ...+.+|...+.+.|++|...++++. .+....++|.+
T Consensus 194 lg~YLgLTG~rl~-GaD~~~~GlATHyv~S~~l~~Lee~L~-~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~ 271 (401)
T KOG1684|consen 194 LGLYLGLTGQRLS-GADALRCGLATHYVPSEKLPSLEERLL-KNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINK 271 (401)
T ss_pred HHHhhhhccceec-chHHHHhcchhhccchhhhhHHHHHHh-hhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHH
Confidence 8999999999999 899999999999999999999999998 56788888999999999999876554 45568899999
Q ss_pred hcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHH
Q 013851 301 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 380 (435)
Q Consensus 301 ~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~ 380 (435)
||+.+ ||+|||+.|++.++ ...+.+||+++++.|.++||+|+++|.++++.+. ..++++|+.+|+++.
T Consensus 272 ~Fs~~-tVeeIie~lk~~q~--~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs---------~~tl~~~l~~Eyr~s 339 (401)
T KOG1684|consen 272 CFSAN-TVEEIIEALKNYQQ--SADGSEWAKETLKTLKKMSPTSLKVTLRQIREGS---------KQTLDQCLTMEYRLS 339 (401)
T ss_pred hhccc-cHHHHHHHHHHHhh--hhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhh---------HHHHHHHHHHHHHHH
Confidence 99999 99999999998876 3345799999999999999999999999999987 688999999999999
Q ss_pred HHhCCCchHHHHHHHHHhcCCCCCCCCCCCcCCCCHHHHHhcccCCCCCCCCCCC
Q 013851 381 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 435 (435)
Q Consensus 381 ~~~~~s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~~~~~~~~~~~~ 435 (435)
.+.+.++||.||+||.|+||+++|+|+|.+++||++++|+.||.| .+..+|||+
T Consensus 340 ~~~~~~~DF~EGvRA~LIDKd~~PKW~p~~l~~V~e~~Vdn~F~~-~p~~~eLkl 393 (401)
T KOG1684|consen 340 LRMLMRGDFCEGVRAVLIDKDQNPKWDPASLADVTEDEVDNYFKP-LPSKSELKL 393 (401)
T ss_pred HHHhhccchhhhhhheeecCCcCCCCCCcchhhcCHHHHHHhccC-CCCcccccC
Confidence 999999999999999999999999999999999999999999999 444888875
No 3
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=6.4e-68 Score=536.22 Aligned_cols=344 Identities=36% Similarity=0.634 Sum_probs=299.6
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhch---hH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQL---SE 142 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~---~~ 142 (435)
+.|.++. +++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.| ++||+|+|++++...... ..
T Consensus 9 ~~v~~~~-~~~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G-~~FcAGgDl~~l~~~~~~~~~~~ 86 (381)
T PLN02988 9 SQVLVEE-KSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG-RAFCAGGDVAAVVRDIEQGNWRL 86 (381)
T ss_pred CceEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCC-CCcccCcCHHHHHhhhcccchhH
Confidence 3577775 689999999999999999999999999999999999999999999998 899999999998643211 11
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...++...+.+...|.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|. .
T Consensus 87 ~~~~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~--~ 164 (381)
T PLN02988 87 GANFFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGF--F 164 (381)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHH--H
Confidence 22345555667778999999999999999999999999999999999999999999999999999999999999994 6
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCC-CCchhhhhhhHHHhh
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITSC 301 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~~~ 301 (435)
+++|+|||++++ |+||+++|||+++||++++.+.+.+++... ..+...+..+++.+...+. .+......+..|++|
T Consensus 165 ~~~l~LTG~~i~-a~eA~~~GLv~~vv~~~~l~~~~~~la~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~ 241 (381)
T PLN02988 165 GEYVGLTGARLD-GAEMLACGLATHFVPSTRLTALEADLCRIG--SNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRC 241 (381)
T ss_pred HHHHHHcCCCCC-HHHHHHcCCceEecCHhHHHHHHHHHHHhh--ccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHH
Confidence 899999999999 999999999999999999999989887432 2334456777777765442 123334468899999
Q ss_pred cCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHH
Q 013851 302 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 381 (435)
Q Consensus 302 F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~ 381 (435)
|+.+ |++||+++|+.+.+.. ..+|++++++.|.++||+|+++|+++++++. ..++.+|+++|+++..
T Consensus 242 f~~~-~~~~i~~~L~~~~~~~---~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~---------~~sl~e~~~~e~~~~~ 308 (381)
T PLN02988 242 FSRR-TVEEIISALEREATQE---ADGWISATIQALKKASPASLKISLRSIREGR---------LQGVGQCLIREYRMVC 308 (381)
T ss_pred hCCC-CHHHHHHHHHhhcccc---ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHH
Confidence 9987 9999999999842100 1489999999999999999999999999987 6799999999999999
Q ss_pred HhCC---CchHHHHHHHHHhcCCCCCCCCCCCcCCCCHHHHHhcccCCCCC
Q 013851 382 RSSL---RSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTG 429 (435)
Q Consensus 382 ~~~~---s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~~~~~~ 429 (435)
+++. ++||.|||||.|+||+++|+|+|+++++|+++.|++||.|.+.+
T Consensus 309 ~~~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~l~~v~~~~v~~~f~~~~~~ 359 (381)
T PLN02988 309 HVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERVEEE 359 (381)
T ss_pred HHHhcCCCchHHHhHHHHhcCCCCCCCCCCCChhhCCHHHHHHHhCCCCcc
Confidence 9987 69999999999999999999999999999999999999998654
No 4
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=4.1e-67 Score=532.02 Aligned_cols=350 Identities=32% Similarity=0.587 Sum_probs=297.9
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc---hh
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ---LS 141 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~---~~ 141 (435)
.+.|.++. +++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.| ++||+|+|++++..... ..
T Consensus 36 ~~~V~~e~-~g~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~G-kaFcAGgDl~~l~~~~~~~~~~ 113 (401)
T PLN02157 36 DYQVLVEG-SGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSG-RAFCAGGDIVSLYHLRKRGSPD 113 (401)
T ss_pred CCceEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCC-CCccCCcCHHHHHhhccccchH
Confidence 34577775 689999999999999999999999999999999999999999999998 89999999999864321 12
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchH
Q 013851 142 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 221 (435)
Q Consensus 142 ~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 221 (435)
....++...+.++..|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| .
T Consensus 114 ~~~~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G-~- 191 (401)
T PLN02157 114 AIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPG-R- 191 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhh-H-
Confidence 22345556667788899999999999999999999999999999999999999999999999999999999999999 4
Q ss_pred HHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCC-CCCchhhhhhhHHHh
Q 013851 222 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP-EGEAPLKLLLPQITS 300 (435)
Q Consensus 222 ~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~~ 300 (435)
.+++|+|||++++ |+||+++|||+++||++++.+ +.+++...... +...+...++.+.... .....+......|..
T Consensus 192 ~a~~L~LTG~~i~-A~eA~~~GLv~~vVp~~~l~~-~~~~~~~i~~~-~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~ 268 (401)
T PLN02157 192 LGEYLGLTGLKLS-GAEMLACGLATHYIRSEEIPV-MEEQLKKLLTD-DPSVVESCLEKCAEVAHPEKTGVIRRIDLLEK 268 (401)
T ss_pred HHHHHHHcCCcCC-HHHHHHcCCceEEeCHhHHHH-HHHHHHHHHcC-CHHHHHHHHHHHhcccCCcchhHHHHHHHHHH
Confidence 7999999999999 999999999999999999854 44555543333 3344555555553322 122344556789999
Q ss_pred hcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHH
Q 013851 301 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 380 (435)
Q Consensus 301 ~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~ 380 (435)
||+.+ +++||+++|+.+.++.. .+|++++++.|.++||+|+++|.++++++. ..++.+|+++|+++.
T Consensus 269 ~f~~~-d~~ei~~al~~~~~kr~---~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~---------~~~l~e~~~~e~~~~ 335 (401)
T PLN02157 269 CFSHD-TVEEIIDSLEIEAGRRK---DTWCITTLRRLKESSPLSLKVALRSIREGR---------LQTLDQCLIREYRMS 335 (401)
T ss_pred HhcCC-CHHHHHHHHHhhhcccc---hHHHHHHHHHHHhcCcHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHH
Confidence 99987 99999999976422211 489999999999999999999999999987 578999999999999
Q ss_pred HHhCC---CchHHHHHHHHHhcCCCCCCCCCCCcCCCCHHHHHhcccCCCCCCCCCC
Q 013851 381 LRSSL---RSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELK 434 (435)
Q Consensus 381 ~~~~~---s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~~~~~~~~~~~ 434 (435)
.+++. ++||.|||||.|+||+++|+|+|+++++|+++.|++||.|+.++.++|+
T Consensus 336 ~~~~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~l~~V~~~~v~~~f~~~~~~~~~l~ 392 (401)
T PLN02157 336 LQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSEDMVDDYFCALTPTEPDLD 392 (401)
T ss_pred HHHHhcCCCchHHHHHHHHHcCCCCCCCCCCCChhhCCHHHHHHHhCCCCCCccccc
Confidence 99885 6999999999999999999999999999999999999999864455565
No 5
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=2.5e-64 Score=511.73 Aligned_cols=346 Identities=35% Similarity=0.635 Sum_probs=299.1
Q ss_pred cccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh-chh
Q 013851 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN-QLS 141 (435)
Q Consensus 63 ~~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~-~~~ 141 (435)
++++.+.++. +++|++||||||+++|+||.+|+.+|.++|+.++.|++||+|||+|.| ++||+|+|++++.... ...
T Consensus 8 ~~~~~v~~~~-~~~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g-~~FcaG~Dl~~~~~~~~~~~ 85 (379)
T PLN02874 8 PAEEVVLGEE-KGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAG-RAFSAGGDLKMFYDGRESDD 85 (379)
T ss_pred CCCCceEEEE-ECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CCccCccCHHHHHhhcccch
Confidence 3466788875 689999999999999999999999999999999999999999999998 8999999999985422 112
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchH
Q 013851 142 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 221 (435)
Q Consensus 142 ~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 221 (435)
....++...+.++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .
T Consensus 86 ~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g-~- 163 (379)
T PLN02874 86 SCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPG-H- 163 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhH-H-
Confidence 22233334455677899999999999999999999999999999999999999999999999999999999999988 4
Q ss_pred HHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCC-CCCchhhhhhhHHHh
Q 013851 222 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP-EGEAPLKLLLPQITS 300 (435)
Q Consensus 222 ~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~~ 300 (435)
.+++|+|||++++ |+||+++|||+++||++++.+.+.++.+. ...+...++++|+.|.... .....+....+.|.+
T Consensus 164 ~a~~l~ltG~~i~-a~eA~~~GLv~~vv~~~~l~~~~~~l~~l--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 240 (379)
T PLN02874 164 LGEYLALTGARLN-GKEMVACGLATHFVPSEKLPELEKRLLNL--NSGDESAVQEAIEEFSKDVQADEDSILNKQSWINE 240 (379)
T ss_pred HHHHHHHcCCccc-HHHHHHcCCccEEeCHHHHHHHHHHHHhc--CCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHH
Confidence 7999999999999 99999999999999999888755565443 2344577899999987643 223455556889999
Q ss_pred hcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHH
Q 013851 301 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 380 (435)
Q Consensus 301 ~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~ 380 (435)
||+.+ ++.+|+++|++..++.. .+||.+++++|+++||++++++|++++++. ..++.++++.|++..
T Consensus 241 ~f~~~-~~~eii~al~~~~~~~~---~~~A~~~a~~l~~~sP~al~~tk~~~~~~~---------~~~l~~~l~~e~~~~ 307 (379)
T PLN02874 241 CFSKD-TVEEIIKAFESEASKTG---NEWIKETLKGLRRSSPTGLKITLRSIREGR---------KQSLAECLKKEFRLT 307 (379)
T ss_pred HhCCC-CHHHHHHHHhhcccccc---cHHHHHHHHHHHhcChHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHH
Confidence 99988 99999999997642222 489999999999999999999999999876 568999999999998
Q ss_pred HHhCC---CchHHHHHHHHHhcCCCCCCCCCCCcCCCCHHHHHhcccCCCC
Q 013851 381 LRSSL---RSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 428 (435)
Q Consensus 381 ~~~~~---s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~~~~~ 428 (435)
...+. ++||+|||+||+++|+|+|+|+++++++|++++|++||.|.+.
T Consensus 308 ~~~~~~~~~~D~~EGv~AflidK~r~P~w~~~~~~~v~~~~v~~~f~~~~~ 358 (379)
T PLN02874 308 MNILRSTVSDDVYEGIRALVIDKDNAPKWNPSTLDEVTDEKVDLVFQPFKA 358 (379)
T ss_pred HHHHhcCcCcchhhccceEEEcCCCCCCCCCCChhhCCHHHHHHHhCCCCC
Confidence 88777 9999999999987888899999999999999999999998653
No 6
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=1.3e-64 Score=507.94 Aligned_cols=337 Identities=43% Similarity=0.745 Sum_probs=299.2
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc--hhHH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ--LSEM 143 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~--~~~~ 143 (435)
+.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++..... ....
T Consensus 3 ~~v~~~~-~~~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~ 81 (342)
T PRK05617 3 DEVLAEV-EGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLA 81 (342)
T ss_pred ceEEEEE-ECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchh
Confidence 3577775 799999999999999999999999999999999999999999999998789999999998754221 1111
Q ss_pred H-HHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 144 I-EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 144 ~-~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
. .++...++++..+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++| . .
T Consensus 82 ~~~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g-~-~ 159 (342)
T PRK05617 82 ADRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPG-A-L 159 (342)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhccc-H-H
Confidence 1 34444556788899999999999999999999999999999999999999999999999999999999999877 5 8
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||+.++ |+||+++|||+++||++++.+..+++++..+ .+..+.+..+|.+|....+. ..+......|++||
T Consensus 160 a~~llltG~~i~-A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~ 236 (342)
T PRK05617 160 GTYLALTGARIS-AADALYAGLADHFVPSADLPALLDALISLRW-DSGADVVDAALAAFATPAPA-SELAAQRAWIDECF 236 (342)
T ss_pred HHHHHHcCCCCC-HHHHHHcCCcceecCHHHHHHHHHHHHhcCC-ccchhHHHHHHHHhccCCCc-chhHHHHHHHHHHh
Confidence 999999999999 9999999999999999988877667765533 44556788899998776443 47778888999999
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
+.. ++++|+++|++.. .+||.+++++|+++||.+++++|+++++.. ..+++++++.|...+..
T Consensus 237 ~~~-~~~~~~~~l~~~~-------~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~---------~~~l~~~~~~e~~~~~~ 299 (342)
T PRK05617 237 AGD-TVEDIIAALEADG-------GEFAAKTADTLRSRSPTSLKVTLEQLRRAR---------GLTLEECLRRELRLALA 299 (342)
T ss_pred CCC-CHHHHHHHHHhcc-------HHHHHHHHHHHHhCCcHHHHHHHHHHHHhc---------CCCHHHHHHHHHHHHHH
Confidence 886 9999999999995 489999999999999999999999999876 56899999999999999
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCCCCcCCCCHHHHHhcccC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEP 425 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~~ 425 (435)
.+.++|++||+++|+++|+|.|+|++++++||++++|++||+|
T Consensus 300 ~~~~~d~~egv~afl~ek~r~p~~~~~~~~~~~~~~~~~~~~~ 342 (342)
T PRK05617 300 MLRSPDFVEGVRAVLIDKDRNPKWSPATLEDVTPEDVEAFFAP 342 (342)
T ss_pred HHhCCchhhccceEEEcCCCCCCCCCCChHhCCHHHHHHhhCC
Confidence 9999999999999985665899999999999999999999998
No 7
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-54 Score=407.88 Aligned_cols=255 Identities=25% Similarity=0.352 Sum_probs=224.7
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHH
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMI 144 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~ 144 (435)
+..+.....+++|+.|+||||+++|+|+..|+.+|.++|..+++|+++.++||||.| ++||+|+||+++......+-..
T Consensus 35 ~~~~~~~~~d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~g-ksFcsG~Dl~e~~~~~~~~~~~ 113 (290)
T KOG1680|consen 35 PIKIELVGEDNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSG-KSFCSGADLKEMKKDEFQDVSD 113 (290)
T ss_pred cceeEEeecCCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCC-CccccccCHHHHhhcccccccc
Confidence 333433335789999999999999999999999999999999999999999999998 9999999999997744211111
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 145 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 145 ~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
.. +.+.+..+.+.+||+||+|||+|+|||+||+++||+|||+++|+|++|+.++|++|.+||+++|+|.+|.+ +|+
T Consensus 114 ~~---~~~~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s-~Al 189 (290)
T KOG1680|consen 114 GI---FLRVWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKS-RAL 189 (290)
T ss_pred cc---ccchhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChH-HHH
Confidence 11 22334445589999999999999999999999999999999999999999999999999999999999997 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
++++||++++ |+||.++|||++|||.+++...+.
T Consensus 190 e~~ltg~~~~-AqeA~~~GlVn~Vvp~~~~l~eAv--------------------------------------------- 223 (290)
T KOG1680|consen 190 EMILTGRRLG-AQEAKKIGLVNKVVPSGDALGEAV--------------------------------------------- 223 (290)
T ss_pred HHHHhcCccc-HHHHHhCCceeEeecchhHHHHHH---------------------------------------------
Confidence 9999999999 999999999999999988654222
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhC
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 384 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~ 384 (435)
+|++ +|+++||.+++..|+.++.+. ..++.+.+..|...+...+
T Consensus 224 -----------------------~l~~----~Ia~~~~~~v~~~K~svn~~~---------e~~l~e~l~~e~~~~~s~~ 267 (290)
T KOG1680|consen 224 -----------------------KLAE----QIAKNSPLVVRADKESVNAAY---------ETTLFEGLELERDLFGSTF 267 (290)
T ss_pred -----------------------HHHH----HHHhCCHHHHHHHHHHHHHHh---------hccHHHHHHhhhhhhhhhh
Confidence 4554 799999999999999999977 6889999999999999999
Q ss_pred CCchHHHHHHHHHhcCCCCCCCCC
Q 013851 385 LRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 385 ~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
..+|-+|||.+|. +| |+|+|+.
T Consensus 268 ~~~d~~Eg~~~f~-~k-r~~~~~k 289 (290)
T KOG1680|consen 268 ATEDRLEGMTAFA-EK-RKPKFSK 289 (290)
T ss_pred hhHHHHHHHHHhc-cc-CCccccc
Confidence 9999999999998 78 8999974
No 8
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-53 Score=413.09 Aligned_cols=254 Identities=23% Similarity=0.317 Sum_probs=225.7
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEV 146 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 146 (435)
.+.++. +++|++||||||++ |++|.+|+.+|.++++.+++|+++|+|||+|.|+++||+|+|++++.... ......+
T Consensus 4 ~v~~~~-~~~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~~-~~~~~~~ 80 (258)
T PRK09076 4 ELDLEI-DGHVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADGD-KAVAREM 80 (258)
T ss_pred EEEEEE-ECCEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhcC-hhhHHHH
Confidence 477775 68999999999986 99999999999999999999999999999999877999999999875422 1122233
Q ss_pred HHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHH
Q 013851 147 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 226 (435)
Q Consensus 147 ~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l 226 (435)
...+..++.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++|
T Consensus 81 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~l 159 (258)
T PRK09076 81 ARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEG-WAKRM 159 (258)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHH-HHHHH
Confidence 34445678889999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcc
Q 013851 227 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 306 (435)
Q Consensus 227 ~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~ 306 (435)
++||++++ |+||+++|||+++||++++.+.+.
T Consensus 160 ~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 191 (258)
T PRK09076 160 ILCGERVD-AATALRIGLVEEVVEKGEAREAAL----------------------------------------------- 191 (258)
T ss_pred HHcCCcCC-HHHHHHCCCCceecCchhHHHHHH-----------------------------------------------
Confidence 99999999 999999999999999887764332
Q ss_pred cHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCC
Q 013851 307 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 386 (435)
Q Consensus 307 s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s 386 (435)
++| ++|+++||.+++.+|++++... ..++.+.++.|...+...+.+
T Consensus 192 ---------------------~~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~ 237 (258)
T PRK09076 192 ---------------------ALA----QKVANQSPSAVAACKTLIQAAR---------NGPRAAALALERELFVDLFDT 237 (258)
T ss_pred ---------------------HHH----HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhcC
Confidence 233 3799999999999999999876 567999999999999999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCC
Q 013851 387 SDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 387 ~d~~egv~afl~~K~r~P~w~~ 408 (435)
+|++||+++|+ +| |+|+|++
T Consensus 238 ~~~~eg~~af~-~k-r~p~~~~ 257 (258)
T PRK09076 238 EDQREGVNAFL-EK-RAPQWKN 257 (258)
T ss_pred chHHHHHHHHh-cC-CCCCCCC
Confidence 99999999999 77 7999974
No 9
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=1.1e-53 Score=412.52 Aligned_cols=250 Identities=24% Similarity=0.381 Sum_probs=224.3
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHH
Q 013851 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSL 153 (435)
Q Consensus 74 ~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l 153 (435)
+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++.... ......+......+
T Consensus 2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~ 80 (251)
T PLN02600 2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKMS-PSEVQKFVNSLRST 80 (251)
T ss_pred CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhccC-hHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999998668999999999875432 22233344555677
Q ss_pred HHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCC
Q 013851 154 ICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRI 233 (435)
Q Consensus 154 ~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i 233 (435)
+.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++|++||+++
T Consensus 81 ~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~-~a~~l~ltg~~~ 159 (251)
T PLN02600 81 FSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRS-RAKELIFTGRRI 159 (251)
T ss_pred HHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHH-HHHHHHHhCCcc
Confidence 8889999999999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred CcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcccHHHHHH
Q 013851 234 STPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIE 313 (435)
Q Consensus 234 ~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~ei~~ 313 (435)
+ |+||+++||||++||++++.+.+.
T Consensus 160 ~-a~eA~~~Glv~~vv~~~~~~~~a~------------------------------------------------------ 184 (251)
T PLN02600 160 G-AREAASMGLVNYCVPAGEAYEKAL------------------------------------------------------ 184 (251)
T ss_pred C-HHHHHHcCCCcEeeChhHHHHHHH------------------------------------------------------
Confidence 9 999999999999999887764322
Q ss_pred HHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCCchHHHHH
Q 013851 314 ELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGV 393 (435)
Q Consensus 314 ~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv 393 (435)
++| ++|+++||.+++.+|++++... ..++.+.++.|...+...+.++|++||+
T Consensus 185 --------------~~a----~~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~d~~eg~ 237 (251)
T PLN02600 185 --------------ELA----QEINQKGPLAIKMAKKAINEGS---------EVDMASGLEIEEECYEQVLKTKDRLEGL 237 (251)
T ss_pred --------------HHH----HHHHhCCHHHHHHHHHHHHHHc---------cCCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 333 3799999999999999999875 5689999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCC
Q 013851 394 RAVLVDKDQNPKWNPA 409 (435)
Q Consensus 394 ~afl~~K~r~P~w~~~ 409 (435)
++|+ +| |+|+|+++
T Consensus 238 ~af~-ek-r~p~~~~~ 251 (251)
T PLN02600 238 AAFA-EK-RKPVYTGK 251 (251)
T ss_pred HHHh-cC-CCCCCCCC
Confidence 9999 78 79999753
No 10
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=1.5e-53 Score=413.65 Aligned_cols=259 Identities=27% Similarity=0.346 Sum_probs=229.7
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEM 143 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~ 143 (435)
.++.+.++. +++|++|+||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.... ....
T Consensus 2 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~~-~~~~ 79 (260)
T PRK05809 2 ELKNVILEK-EGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDLN-EEEG 79 (260)
T ss_pred CcceEEEEE-eCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhccC-hHHH
Confidence 456788875 68999999999999999999999999999999999999999999999868999999999985432 1122
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 223 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a 223 (435)
..+......++..|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 80 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a 158 (260)
T PRK05809 80 RKFGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPG-KA 158 (260)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHH-HH
Confidence 22333445678889999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcC
Q 013851 224 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 303 (435)
Q Consensus 224 ~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 303 (435)
++|++||+.++ |+||+++||||+++|++++.+.+.
T Consensus 159 ~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 193 (260)
T PRK05809 159 KELIYTGDMIN-AEEALRIGLVNKVVEPEKLMEEAK-------------------------------------------- 193 (260)
T ss_pred HHHHHhCCCCC-HHHHHHcCCCCcccChHHHHHHHH--------------------------------------------
Confidence 99999999999 999999999999999877654322
Q ss_pred CcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHh
Q 013851 304 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 383 (435)
Q Consensus 304 ~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~ 383 (435)
+++ ++|+++||.+++.+|++++... ..++.++++.|.+.+...
T Consensus 194 ------------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~ 236 (260)
T PRK05809 194 ------------------------ALA----NKIAANAPIAVKLCKDAINRGM---------QVDIDTAVAIEAEDFGEC 236 (260)
T ss_pred ------------------------HHH----HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHH
Confidence 333 3689999999999999999876 567999999999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 384 SLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 384 ~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
+.++|++||+++|+ +| |+|+|+++
T Consensus 237 ~~~~~~~egi~af~-~~-r~p~~~~~ 260 (260)
T PRK05809 237 FSTEDQTEGMTAFV-EK-REKNFKNK 260 (260)
T ss_pred hcCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 99999999999999 77 79999753
No 11
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-53 Score=413.55 Aligned_cols=254 Identities=25% Similarity=0.372 Sum_probs=226.4
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc---hhHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ---LSEM 143 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~---~~~~ 143 (435)
.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++..... ....
T Consensus 4 ~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK05980 4 TVLIEI-RDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVAL 82 (260)
T ss_pred eEEEEE-ECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhH
Confidence 477775 799999999999999999999999999999999999999999999998679999999998754321 1123
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 223 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a 223 (435)
..++.....++.+|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. ++
T Consensus 83 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a 161 (260)
T PRK05980 83 RDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRK-RA 161 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHH-HH
Confidence 34444556678889999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcC
Q 013851 224 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 303 (435)
Q Consensus 224 ~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 303 (435)
++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 162 ~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 196 (260)
T PRK05980 162 LELLLTGDAFS-AERALEIGLVNAVVPHEELLPAAR-------------------------------------------- 196 (260)
T ss_pred HHHHHcCCccC-HHHHHHcCCCCcccCHHHHHHHHH--------------------------------------------
Confidence 99999999999 999999999999999887764332
Q ss_pred CcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHh
Q 013851 304 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 383 (435)
Q Consensus 304 ~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~ 383 (435)
++| ++|++.+|.+++.+|++++... ..++.+.++.|...+...
T Consensus 197 ------------------------~~a----~~la~~~p~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~~ 239 (260)
T PRK05980 197 ------------------------ALA----RRIIRHSPVAVAAILTAVTRGL---------NLSIAEGLLIESEQFARM 239 (260)
T ss_pred ------------------------HHH----HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHH
Confidence 333 3689999999999999999876 567999999999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCC
Q 013851 384 SLRSDFAEGVRAVLVDKDQNPKW 406 (435)
Q Consensus 384 ~~s~d~~egv~afl~~K~r~P~w 406 (435)
+.++|++||+.+|+ +| |+|+|
T Consensus 240 ~~~~~~~e~~~af~-~k-r~p~~ 260 (260)
T PRK05980 240 AGSADLREGLAAWI-ER-RRPAY 260 (260)
T ss_pred hcChhHHHHHHHHh-cc-CCCCC
Confidence 99999999999999 78 79988
No 12
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-53 Score=414.66 Aligned_cols=260 Identities=22% Similarity=0.298 Sum_probs=230.6
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc-hhH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ-LSE 142 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~-~~~ 142 (435)
+.+.|.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++..... .+.
T Consensus 9 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 87 (269)
T PRK06127 9 PTGKLLAEK-TGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESRSDAEA 87 (269)
T ss_pred CCCceEEEE-ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcccchHH
Confidence 456788885 789999999999999999999999999999999999999999999998679999999998754321 122
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...+......++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 88 ~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~ 166 (269)
T PRK06127 88 VAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPS-A 166 (269)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHH-H
Confidence 223444455678889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||+.++ |+||+++|||+++||++++.+.+.
T Consensus 167 a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 202 (269)
T PRK06127 167 AKDLFYTARRFD-AAEALRIGLVHRVTAADDLETALA------------------------------------------- 202 (269)
T ss_pred HHHHHHcCCCCC-HHHHHHcCCCCEeeCHHHHHHHHH-------------------------------------------
Confidence 999999999999 999999999999999887765333
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
+||+ +|++.||.+++.+|++++... ..++.+.++.|...+..
T Consensus 203 -------------------------~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~ 244 (269)
T PRK06127 203 -------------------------DYAA----TIAGNAPLTLRAAKRAIAELL---------KDEPERDMAACQALVAA 244 (269)
T ss_pred -------------------------HHHH----HHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHH
Confidence 3333 688899999999999999876 56799999999999999
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
.+.++|++||+.+|+ +| |+|+|+++
T Consensus 245 ~~~~~d~~e~~~af~-ek-r~p~~~~~ 269 (269)
T PRK06127 245 CFDSEDYREGRAAFM-EK-RKPVFKGR 269 (269)
T ss_pred HhcChHHHHHHHHHh-cC-CCCCCCCC
Confidence 999999999999999 78 79999763
No 13
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-53 Score=412.07 Aligned_cols=255 Identities=24% Similarity=0.314 Sum_probs=226.3
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHH
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMI 144 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~ 144 (435)
++.+.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++......+
T Consensus 3 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~--- 77 (257)
T PRK05862 3 YETILVET-RGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSE-KAFAAGADIKEMADLSFMD--- 77 (257)
T ss_pred CceEEEEe-eCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCC-CceECCcChHhHhccchhH---
Confidence 45577775 689999999999999999999999999999999999999999999997 8999999999875432111
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 145 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 145 ~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
.+......++.+|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 78 ~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~ 156 (257)
T PRK05862 78 VYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKA-KAM 156 (257)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHH-HHH
Confidence 1223334567789999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
+|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 157 ~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 190 (257)
T PRK05862 157 DLCLTGRMMD-AAEAERAGLVSRVVPADKLLDEAL--------------------------------------------- 190 (257)
T ss_pred HHHHhCCccC-HHHHHHcCCCCEeeCHhHHHHHHH---------------------------------------------
Confidence 9999999999 999999999999999887764333
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhC
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 384 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~ 384 (435)
+++ ++|++.+|.+++.+|++++... ..++.++++.|.+.+...+
T Consensus 191 -----------------------~~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~ 234 (257)
T PRK05862 191 -----------------------AAA----TTIASFSLPAVMMAKEAVNRAY---------ETTLAEGLLFERRLFHSLF 234 (257)
T ss_pred -----------------------HHH----HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHh
Confidence 333 3688999999999999999876 5679999999999999999
Q ss_pred CCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 385 LRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 385 ~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
.++|++||+++|+ +| |+|.|+++
T Consensus 235 ~s~~~~e~i~af~-~k-r~p~~~~~ 257 (257)
T PRK05862 235 ATEDQKEGMAAFV-EK-RKPVFKHR 257 (257)
T ss_pred cChhHHHHHHHHh-cc-CCCCCCCC
Confidence 9999999999999 78 79999863
No 14
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-53 Score=412.88 Aligned_cols=258 Identities=24% Similarity=0.350 Sum_probs=229.8
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIE 145 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~ 145 (435)
+.+.+++.+++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++.... ......
T Consensus 3 ~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~-~~~~~~ 81 (260)
T PRK07657 3 QNISVDYVTPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGMN-EEQVRH 81 (260)
T ss_pred ceEEEEEccCCEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcCC-hhhHHH
Confidence 4677775468999999999999999999999999999999999999999999999866999999999975422 222334
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHH
Q 013851 146 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 225 (435)
Q Consensus 146 ~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~ 225 (435)
+......++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.+ ++++
T Consensus 82 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~-~a~~ 160 (260)
T PRK07657 82 AVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG-RAKE 160 (260)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHH-HHHH
Confidence 445556788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCc
Q 013851 226 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 305 (435)
Q Consensus 226 l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~ 305 (435)
|++||++++ |+||+++|||+++||++++.+.+.
T Consensus 161 l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 193 (260)
T PRK07657 161 LIYTGRRIS-AQEAKEIGLVEFVVPAHLLEEKAI---------------------------------------------- 193 (260)
T ss_pred HHHhCCCCC-HHHHHHcCCCCeecCHHHHHHHHH----------------------------------------------
Confidence 999999999 999999999999999887764333
Q ss_pred ccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCC
Q 013851 306 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 385 (435)
Q Consensus 306 ~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~ 385 (435)
+++ ++|+.++|.+++.+|++++... ..++.+.++.|...+...+.
T Consensus 194 ----------------------~~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 238 (260)
T PRK07657 194 ----------------------EIA----EKIASNGPIAVRQAKEAISNGI---------QVDLHTGLQIEKQAYEGTIP 238 (260)
T ss_pred ----------------------HHH----HHHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHhc
Confidence 333 3689999999999999999876 56799999999999999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCCC
Q 013851 386 RSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 386 s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
++|++||+++|+ +| |+|+|+++
T Consensus 239 ~~~~~e~~~af~-~~-r~~~~~~~ 260 (260)
T PRK07657 239 TKDRLEGLQAFK-EK-RKPMYKGE 260 (260)
T ss_pred CHhHHHHHHHHh-cC-CCCCCCCC
Confidence 999999999999 77 79999753
No 15
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-53 Score=410.43 Aligned_cols=254 Identities=24% Similarity=0.319 Sum_probs=224.8
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIE 145 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~ 145 (435)
+.|.++. +++|++||||||++.|+||.+|+.+|.++++.++ +++|+|||||.| ++||+|+|++++.... ......
T Consensus 2 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g-~~F~aG~Dl~~~~~~~-~~~~~~ 76 (255)
T PRK08150 2 SLVSYEL-DGGVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEG-DHFCAGLDLSELRERD-AGEGMH 76 (255)
T ss_pred ceEEEEe-eCCEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCC-CceecCcCHHHHhhcc-chhHHH
Confidence 4577775 6899999999999999999999999999999997 689999999998 7999999999985432 112223
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHH
Q 013851 146 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 225 (435)
Q Consensus 146 ~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~ 225 (435)
+....++++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++
T Consensus 77 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~ 155 (255)
T PRK08150 77 HSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVA-RMTD 155 (255)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHH-HHHH
Confidence 344456678889999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCc
Q 013851 226 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 305 (435)
Q Consensus 226 l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~ 305 (435)
|++||++++ |+||+++||||++||++++.+.+.
T Consensus 156 l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 188 (255)
T PRK08150 156 MMLTGRVYD-AQEGERLGLAQYLVPAGEALDKAM---------------------------------------------- 188 (255)
T ss_pred HHHcCCcCC-HHHHHHcCCccEeeCchHHHHHHH----------------------------------------------
Confidence 999999999 999999999999999888765333
Q ss_pred ccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCC
Q 013851 306 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 385 (435)
Q Consensus 306 ~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~ 385 (435)
++| ++|+++||.+++.+|++++... ..++++.++.|...+...+.
T Consensus 189 ----------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 233 (255)
T PRK08150 189 ----------------------ELA----RRIAQNAPLTNFAVLNALPRIA---------DMSADDGLFVESLMAAVAQS 233 (255)
T ss_pred ----------------------HHH----HHHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHhc
Confidence 333 3699999999999999999875 56799999999998888999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCCC
Q 013851 386 RSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 386 s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
++|++||+++|+ +| |+|+|+++
T Consensus 234 s~d~~eg~~af~-~k-r~p~~~~~ 255 (255)
T PRK08150 234 APEAKERLRAFL-EK-KAAKVKPP 255 (255)
T ss_pred CHHHHHHHHHHh-cc-CCCCCCCC
Confidence 999999999999 78 79999763
No 16
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.9e-53 Score=414.18 Aligned_cols=257 Identities=21% Similarity=0.287 Sum_probs=227.1
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh------
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN------ 138 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~------ 138 (435)
++.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~~~~~ 82 (272)
T PRK06142 5 YESFTVEL-ADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSG-KHFSYGIDLPAMAGVFGQLGKD 82 (272)
T ss_pred cceEEEEe-cCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CceecccCHHHHhhhccccccc
Confidence 56688885 789999999999999999999999999999999999999999999998 8999999999875421
Q ss_pred ----chhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHh
Q 013851 139 ----QLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAA 214 (435)
Q Consensus 139 ----~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~ 214 (435)
.......+.....+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 162 (272)
T PRK06142 83 GLARPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLP 162 (272)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHH
Confidence 0112222334456678889999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCC-CChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhh
Q 013851 215 KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKL 293 (435)
Q Consensus 215 r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (435)
+++|.. ++++|++||++++ |+||+++||||++||+ +++.+.+.
T Consensus 163 ~~~G~~-~a~~l~l~g~~~~-a~eA~~~GLv~~vv~~~~~l~~~a~---------------------------------- 206 (272)
T PRK06142 163 RIIGDG-HLRELALTGRDID-AAEAEKIGLVNRVYDDADALLAAAH---------------------------------- 206 (272)
T ss_pred HHhCHH-HHHHHHHhCCCcC-HHHHHHcCCccEecCCHHHHHHHHH----------------------------------
Confidence 999998 9999999999999 9999999999999986 66654322
Q ss_pred hhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHH
Q 013851 294 LLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVM 373 (435)
Q Consensus 294 ~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l 373 (435)
+|++ +|++.||.+++.+|++++... ..++.+++
T Consensus 207 ----------------------------------~~a~----~ia~~~~~a~~~~K~~l~~~~---------~~~l~~~~ 239 (272)
T PRK06142 207 ----------------------------------ATAR----EIAAKSPLAVRGTKEVLDYMR---------DHRVADGL 239 (272)
T ss_pred ----------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhh---------cCCHHHHH
Confidence 3333 689999999999999999876 56799999
Q ss_pred HHHHHHHHHhCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 374 KYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 374 ~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
+.|...+...+.++|++|||.+|+ +| |+|+|++
T Consensus 240 ~~~~~~~~~~~~~~d~~egv~af~-~k-r~p~~~~ 272 (272)
T PRK06142 240 RYVATWNAAMLPSKDLTEAIAAHM-EK-RPPEFTG 272 (272)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHh-cC-CCCCCCC
Confidence 999999999999999999999999 77 7999974
No 17
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.2e-53 Score=410.19 Aligned_cols=255 Identities=25% Similarity=0.406 Sum_probs=221.3
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEM 143 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~ 143 (435)
.++.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.........
T Consensus 2 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~ 80 (259)
T PRK06494 2 ALPFSTVER-KGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGKRGWP 80 (259)
T ss_pred CCceeEEEe-ECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCcchhh
Confidence 356788875 6899999999999999999999999999999999999999999999986799999999987543211111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 223 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a 223 (435)
...+.. +..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 81 ---~~~~~~-~~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~a 155 (259)
T PRK06494 81 ---ESGFGG-LTSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLK-RA 155 (259)
T ss_pred ---hHHHHH-HHHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHH-HH
Confidence 111122 2345689999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcC
Q 013851 224 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 303 (435)
Q Consensus 224 ~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 303 (435)
++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 156 ~~lll~g~~~~-a~eA~~~GLv~~vv~~~~l~~~a~-------------------------------------------- 190 (259)
T PRK06494 156 MGMILTGRRVT-AREGLELGFVNEVVPAGELLAAAE-------------------------------------------- 190 (259)
T ss_pred HHHHHcCCcCC-HHHHHHcCCCcEecCHhHHHHHHH--------------------------------------------
Confidence 99999999999 999999999999999887764332
Q ss_pred CcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHH--HHHHH
Q 013851 304 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYE--YRVAL 381 (435)
Q Consensus 304 ~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E--~~~~~ 381 (435)
+||+ +|+++||.+++.+|++++... ..++.+.++.| ...+.
T Consensus 191 ------------------------~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~ 233 (259)
T PRK06494 191 ------------------------RWAD----DILACSPLSIRASKQAVYRGL---------EVSLEEAITAQRDYPAVE 233 (259)
T ss_pred ------------------------HHHH----HHHhcCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHH
Confidence 3333 699999999999999999876 56799999999 56778
Q ss_pred HhCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 382 RSSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 382 ~~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
..+.++|++||+++|+ +| |+|+|++
T Consensus 234 ~~~~~~d~~eg~~af~-~k-r~p~~~~ 258 (259)
T PRK06494 234 ARRASQDYIEGPKAFA-EK-RPPRWKG 258 (259)
T ss_pred HHhcCccHHHHHHHHH-cc-CCCCCCC
Confidence 8899999999999999 77 7999975
No 18
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=5.6e-53 Score=410.71 Aligned_cols=259 Identities=24% Similarity=0.379 Sum_probs=228.8
Q ss_pred cccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhH
Q 013851 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSE 142 (435)
Q Consensus 63 ~~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~ 142 (435)
+..+.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|++||+|||+|.| ++||+|+|++++......+.
T Consensus 8 ~~~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~ 85 (266)
T PRK08139 8 TEAPLLLRED-RDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAG-KAFCAGHDLKEMRAARGLAY 85 (266)
T ss_pred ccCCceEEEe-eCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCC-CcceeccCHHHHhcccchhH
Confidence 4567788885 799999999999999999999999999999999999999999999998 89999999998754321222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...++....+++.+|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++| +++|+|++|.. +
T Consensus 86 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~-~ 163 (266)
T PRK08139 86 FRALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRK-Q 163 (266)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHH-H
Confidence 333445556788899999999999999999999999999999999999999999999999999765 57899999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||++++ |+||+++||||++||++++.+.+.+
T Consensus 164 A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~~------------------------------------------ 200 (266)
T PRK08139 164 AMEMLLTGEFID-AATAREWGLVNRVVPADALDAAVAR------------------------------------------ 200 (266)
T ss_pred HHHHHHcCCccC-HHHHHHcCCccEeeChhHHHHHHHH------------------------------------------
Confidence 999999999999 9999999999999998877653333
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
++ ++|+++||.+++.+|++++... ..++.++++.|...+..
T Consensus 201 --------------------------~a----~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~ 241 (266)
T PRK08139 201 --------------------------LA----AVIAAKSPAAVRIGKEAFYRQA---------EMPLADAYAYAGDVMAE 241 (266)
T ss_pred --------------------------HH----HHHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHH
Confidence 33 3699999999999999999876 56799999999999999
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
.+.++|++||+++|+ +| |+|+|+++
T Consensus 242 ~~~~~d~~eg~~af~-~k-r~p~~~~~ 266 (266)
T PRK08139 242 NMMAEDAEEGIDAFL-EK-RPPEWRGR 266 (266)
T ss_pred HhcCchHHHHHHHHh-cC-CCCCCCCC
Confidence 999999999999999 78 79999753
No 19
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.5e-53 Score=409.64 Aligned_cols=254 Identities=26% Similarity=0.369 Sum_probs=225.9
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEV 146 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 146 (435)
.+.++. +++|++||||||++ |++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...........+
T Consensus 3 ~i~~~~-~~~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 79 (257)
T PRK07658 3 FLSVRV-EDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEG-RFFSAGADIKEFTSVTEAEQATEL 79 (257)
T ss_pred eEEEEe-eCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceEeCcCHHHHhccCchhhHHHH
Confidence 567775 78999999999986 999999999999999999999999999999998 899999999987543221222334
Q ss_pred HHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHH
Q 013851 147 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 226 (435)
Q Consensus 147 ~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l 226 (435)
......++.+|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++|
T Consensus 80 ~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l 158 (257)
T PRK07658 80 AQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKA-KALEM 158 (257)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHH-HHHHH
Confidence 44455678899999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcc
Q 013851 227 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 306 (435)
Q Consensus 227 ~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~ 306 (435)
++||++++ |+||+++||||++||++++.+.+.
T Consensus 159 ~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 190 (257)
T PRK07658 159 MLTSEPIT-GAEALKWGLVNGVFPEETLLDDAK----------------------------------------------- 190 (257)
T ss_pred HHcCCCcC-HHHHHHcCCcCeecChhHHHHHHH-----------------------------------------------
Confidence 99999999 999999999999999887764332
Q ss_pred cHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCC
Q 013851 307 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 386 (435)
Q Consensus 307 s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s 386 (435)
+++ ++|+++||.+++.+|++++... ..++.+.++.|...+...+.+
T Consensus 191 ---------------------~~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~ 236 (257)
T PRK07658 191 ---------------------KLA----KKIAGKSPATTRAVLELLQTTK---------SSSYYEGVKREAKIFGEVFTS 236 (257)
T ss_pred ---------------------HHH----HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhCC
Confidence 233 3688999999999999999876 567999999999999999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCC
Q 013851 387 SDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 387 ~d~~egv~afl~~K~r~P~w~~ 408 (435)
+|++||+++|+ +| |+|+|++
T Consensus 237 ~~~~egi~af~-~k-r~p~~~~ 256 (257)
T PRK07658 237 EDAKEGVQAFL-EK-RKPSFSG 256 (257)
T ss_pred HHHHHHHHHHH-cC-CCCCCCC
Confidence 99999999999 77 7999975
No 20
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=5.6e-53 Score=412.69 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=220.9
Q ss_pred ecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc----------hhH
Q 013851 73 HPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ----------LSE 142 (435)
Q Consensus 73 ~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~----------~~~ 142 (435)
.+++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... ...
T Consensus 14 ~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 92 (275)
T PLN02664 14 PNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAG-DHFCSGIDLKTLNSISEQSSSGDRGRSGER 92 (275)
T ss_pred CCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CceeeCcChHHhhhcccccccccchhhHHH
Confidence 3689999999999999999999999999999999999999999999998 89999999998754210 011
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...+.....+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +
T Consensus 93 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~ 171 (275)
T PLN02664 93 LRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYG-N 171 (275)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCHH-H
Confidence 222333445677889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCC-CChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhh
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 301 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 301 (435)
+++|++||++++ |+||+++||||++||+ +++.+.+.
T Consensus 172 A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~~l~~~~~------------------------------------------ 208 (275)
T PLN02664 172 AMELALTGRRFS-GSEAKELGLVSRVFGSKEDLDEGVR------------------------------------------ 208 (275)
T ss_pred HHHHHHhCCCCC-HHHHHHcCCCceeeCChhHHHHHHH------------------------------------------
Confidence 999999999999 9999999999999995 66653222
Q ss_pred cCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHH
Q 013851 302 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 381 (435)
Q Consensus 302 F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~ 381 (435)
++| ++|+++||.+++.+|++++... ..++.+.++.|...+.
T Consensus 209 --------------------------~~a----~~ia~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~ 249 (275)
T PLN02664 209 --------------------------LIA----EGIAAKSPLAVTGTKAVLLRSR---------ELSVEQGLDYVATWNS 249 (275)
T ss_pred --------------------------HHH----HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHH
Confidence 233 3799999999999999999876 5679999999999999
Q ss_pred HhCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 382 RSSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 382 ~~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
..+.++|++||+++|+ +| |+|.|+.
T Consensus 250 ~~~~~~d~~eg~~af~-ek-r~p~~~~ 274 (275)
T PLN02664 250 AMLVSDDLNEAVSAQI-QK-RKPVFAK 274 (275)
T ss_pred HhccChhHHHHHHHHh-cc-CCCCCCC
Confidence 9999999999999999 78 7999975
No 21
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=5.7e-53 Score=408.36 Aligned_cols=252 Identities=22% Similarity=0.331 Sum_probs=224.3
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEV 146 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 146 (435)
.|.++. +++|++||||||+++|+||.+|+.+|.++++.+++|++||+|||+|.| ++||+|+|++++..... ...+
T Consensus 3 ~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~---~~~~ 77 (255)
T PRK09674 3 ELLVSR-QQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNA-RFFAAGADLNEMAEKDL---AATL 77 (255)
T ss_pred eEEEEe-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CceecccChHhHhccch---hhhH
Confidence 466775 689999999999999999999999999999999999999999999997 89999999998754221 1112
Q ss_pred HHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHH
Q 013851 147 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 226 (435)
Q Consensus 147 ~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l 226 (435)
......++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++|
T Consensus 78 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~-~a~~l 156 (255)
T PRK09674 78 NDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKS-LASQM 156 (255)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHH-HHHHH
Confidence 22334577789999999999999999999999999999999999999999999999999999999999999997 99999
Q ss_pred hhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcc
Q 013851 227 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 306 (435)
Q Consensus 227 ~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~ 306 (435)
+++|+.++ |+||+++||||++||++++.+.+.
T Consensus 157 ~l~g~~~~-a~eA~~~Glv~~vv~~~~~~~~a~----------------------------------------------- 188 (255)
T PRK09674 157 VLTGESIT-AQQAQQAGLVSEVFPPELTLERAL----------------------------------------------- 188 (255)
T ss_pred HHcCCccC-HHHHHHcCCCcEecChHHHHHHHH-----------------------------------------------
Confidence 99999999 999999999999999877654222
Q ss_pred cHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCC
Q 013851 307 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 386 (435)
Q Consensus 307 s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s 386 (435)
+|+ ++|+++||.+++.+|++++... ..++.++++.|...+...+.+
T Consensus 189 ---------------------~~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~ 234 (255)
T PRK09674 189 ---------------------QLA----SKIARHSPLALRAAKQALRQSQ---------EVDLQAGLAQERQLFTLLAAT 234 (255)
T ss_pred ---------------------HHH----HHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhcC
Confidence 333 4799999999999999999876 567999999999999999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCC
Q 013851 387 SDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 387 ~d~~egv~afl~~K~r~P~w~~ 408 (435)
+|++||+++|+ +| |+|+|++
T Consensus 235 ~~~~e~i~af~-~k-r~p~~~~ 254 (255)
T PRK09674 235 EDRHEGISAFL-EK-RTPDFKG 254 (255)
T ss_pred HHHHHHHHHHh-cc-CCCCCCC
Confidence 99999999999 77 7999975
No 22
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.9e-53 Score=409.59 Aligned_cols=258 Identities=21% Similarity=0.306 Sum_probs=224.1
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHH
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMI 144 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~ 144 (435)
++.+.++. +++|++||||||+++|++|.+|+++|.++++.++.|++||+|||||.| ++||+|+|++++..........
T Consensus 4 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~ 81 (263)
T PRK07799 4 GPHALVEQ-RGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAG-GAFCAGMDLKAATKKPPGDSFK 81 (263)
T ss_pred CceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CccccccCHHHHhhccccchhh
Confidence 56688885 689999999999999999999999999999999999999999999998 8999999999986432111111
Q ss_pred H-HH-HHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 145 E-VF-TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 145 ~-~~-~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
. .+ ......+..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~-~ 160 (263)
T PRK07799 82 DGSYDPSRIDALLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYT-V 160 (263)
T ss_pred hhhhhhhHHHHHHHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHH-H
Confidence 1 11 1111223457889999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 161 a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 196 (263)
T PRK07799 161 ACDLLLTGRHIT-AAEAKEIGLIGHVVPDGQALDKAL------------------------------------------- 196 (263)
T ss_pred HHHHHHcCCCCC-HHHHHHcCCccEecCcchHHHHHH-------------------------------------------
Confidence 999999999999 999999999999999988764322
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
+++ ++|++.||.+++.+|++++... ..++.++++.|.+.+..
T Consensus 197 -------------------------~~a----~~~~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~ 238 (263)
T PRK07799 197 -------------------------ELA----ELINANGPLAVQAILRTIRETE---------GMHENEAFKIDTKIGIP 238 (263)
T ss_pred -------------------------HHH----HHHHhcChHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHH
Confidence 333 3689999999999999999876 56799999999999999
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
.+.++|++||+++|+ +| |+|+|+.+
T Consensus 239 ~~~~~~~~egi~af~-~~-r~p~~~~~ 263 (263)
T PRK07799 239 VFLSEDAKEGPRAFA-EK-RAPNFQGR 263 (263)
T ss_pred HhcCccHHHHHHHHH-cc-CCCCCCCC
Confidence 999999999999999 77 79999764
No 23
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=1.1e-52 Score=406.68 Aligned_cols=252 Identities=25% Similarity=0.381 Sum_probs=221.6
Q ss_pred EEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc-hhHHHHHH
Q 013851 69 KGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ-LSEMIEVF 147 (435)
Q Consensus 69 ~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~-~~~~~~~~ 147 (435)
.++. +++|++||||||++.|+||.+|+.+|.++++.+++|+ +|+|||||.| ++||+|+|++++..... .......+
T Consensus 2 ~~e~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T TIGR02280 2 LSAL-EAGVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAG-RGFCAGQDLSERNPTPGGAPDLGRTI 78 (256)
T ss_pred eEEE-ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCC-CCcccCcCHHHHhhccccchhHHHHH
Confidence 4564 6899999999999999999999999999999999999 9999999998 89999999999764221 11111112
Q ss_pred HH-HHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHH
Q 013851 148 TA-EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 226 (435)
Q Consensus 148 ~~-~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l 226 (435)
.. ...++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++|
T Consensus 79 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~-~a~~l 157 (256)
T TIGR02280 79 ETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRA-RAMGL 157 (256)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHH-HHHHH
Confidence 22 23567789999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcc
Q 013851 227 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 306 (435)
Q Consensus 227 ~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~ 306 (435)
++||++++ |+||+++|||+++||++++.+.+.
T Consensus 158 ~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 189 (256)
T TIGR02280 158 AMLGEKLD-ARTAASWGLIWQVVDDAALMDEAQ----------------------------------------------- 189 (256)
T ss_pred HHcCCCCC-HHHHHHcCCcceeeChHHHHHHHH-----------------------------------------------
Confidence 99999999 999999999999999887764333
Q ss_pred cHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCC
Q 013851 307 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 386 (435)
Q Consensus 307 s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s 386 (435)
++| ++|++.||.+++.+|++++... ...+.+.++.|...+...+.+
T Consensus 190 ---------------------~~a----~~la~~~~~~~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~ 235 (256)
T TIGR02280 190 ---------------------ALA----VHLAAQPTRGLALTKRAIQAAA---------TNSLDTQLDLERDLQRELGRS 235 (256)
T ss_pred ---------------------HHH----HHHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHHhcC
Confidence 333 3699999999999999999876 567999999999999999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCC
Q 013851 387 SDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 387 ~d~~egv~afl~~K~r~P~w~~ 408 (435)
+|++||+.+|+ +| |+|+|++
T Consensus 236 ~d~~eg~~af~-~k-r~p~~~~ 255 (256)
T TIGR02280 236 ADYAEGVTAFL-DK-RNPQFTG 255 (256)
T ss_pred hhHHHHHHHHH-cC-CCCCCCC
Confidence 99999999999 77 7999975
No 24
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-52 Score=407.22 Aligned_cols=257 Identities=25% Similarity=0.375 Sum_probs=225.2
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc--hh
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ--LS 141 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~--~~ 141 (435)
.++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++ |+++++|||+|.| ++||+|+|++++..... ..
T Consensus 2 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~ 78 (262)
T PRK08140 2 MYETILLAI-EAGVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAG-RGFCAGQDLADRDVTPGGAMP 78 (262)
T ss_pred CCceEEEEe-ECCEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCC-CCcccCcChHHHhccccccch
Confidence 356688885 6899999999999999999999999999999999 9999999999998 89999999998753210 11
Q ss_pred HHHHHHHH-HHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCch
Q 013851 142 EMIEVFTA-EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 220 (435)
Q Consensus 142 ~~~~~~~~-~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 220 (435)
.....+.. ...++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~ 158 (262)
T PRK08140 79 DLGESIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMA 158 (262)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHH
Confidence 11122222 23467789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHh
Q 013851 221 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 300 (435)
Q Consensus 221 ~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 300 (435)
++++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 159 -~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------- 195 (262)
T PRK08140 159 -RALGLALLGEKLS-AEQAEQWGLIWRVVDDAALADEAQ----------------------------------------- 195 (262)
T ss_pred -HHHHHHHcCCCcC-HHHHHHcCCccEeeChHHHHHHHH-----------------------------------------
Confidence 9999999999999 999999999999999887764322
Q ss_pred hcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHH
Q 013851 301 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 380 (435)
Q Consensus 301 ~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~ 380 (435)
++| ++|+++||.+++.+|++++... ..++.++++.|...+
T Consensus 196 ---------------------------~~a----~~ia~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~ 235 (262)
T PRK08140 196 ---------------------------QLA----AHLATQPTRGLALIKQAMNASA---------TNTLDAQLDLERDLQ 235 (262)
T ss_pred ---------------------------HHH----HHHHhCCHHHHHHHHHHHHHhh---------hCCHHHHHHHHHHHH
Confidence 333 3699999999999999999876 567999999999999
Q ss_pred HHhCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 381 LRSSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 381 ~~~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
...+.++|++||+++|+ +| |+|.|++
T Consensus 236 ~~~~~~~~~~e~~~af~-~k-r~p~~~~ 261 (262)
T PRK08140 236 REAGRSADYAEGVSAFL-EK-RAPRFTG 261 (262)
T ss_pred HHHhcChhHHHHHHHHh-cC-CCCCCCC
Confidence 99999999999999999 77 7999975
No 25
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-52 Score=406.89 Aligned_cols=256 Identities=23% Similarity=0.352 Sum_probs=227.4
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEM 143 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~ 143 (435)
..+.+.++..+++|++|+||||+++|+||.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++.... ..
T Consensus 5 ~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~---~~ 80 (261)
T PRK08138 5 ATDVVLLERPADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGE-KVFAAGADIKEFATAG---AI 80 (261)
T ss_pred CCCCEEEEEccCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCC-CCeeCCcCHHHHhccc---hh
Confidence 3566778765689999999999999999999999999999999999999999999987 7999999999876422 11
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 223 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a 223 (435)
..+.....+++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 81 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a 159 (261)
T PRK08138 81 EMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKF-KA 159 (261)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHH-HH
Confidence 12333445678889999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcC
Q 013851 224 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 303 (435)
Q Consensus 224 ~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 303 (435)
++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 160 ~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 194 (261)
T PRK08138 160 MRMALTGCMVP-APEALAIGLVSEVVEDEQTLPRAL-------------------------------------------- 194 (261)
T ss_pred HHHHHcCCCCC-HHHHHHCCCCcEecCchHHHHHHH--------------------------------------------
Confidence 99999999999 999999999999999887764332
Q ss_pred CcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHh
Q 013851 304 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 383 (435)
Q Consensus 304 ~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~ 383 (435)
+||+ +|++.||.+++.+|++++... ..++.+++..|.+.+...
T Consensus 195 ------------------------~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~ 237 (261)
T PRK08138 195 ------------------------ELAR----EIARMPPLALAQIKEVVLAGA---------DAPLDAALALERKAFQLL 237 (261)
T ss_pred ------------------------HHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHH
Confidence 3333 588899999999999999876 567999999999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 384 SLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 384 ~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
+.++|++||+++|+ +| |+|+|++
T Consensus 238 ~~~~~~~~~i~af~-~k-r~~~~~~ 260 (261)
T PRK08138 238 FDSEDQKEGMDAFL-EK-RKPAYKG 260 (261)
T ss_pred hcCHHHHHHHHHHh-cC-CCCCCCC
Confidence 99999999999999 78 7999975
No 26
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-52 Score=407.16 Aligned_cols=258 Identities=21% Similarity=0.321 Sum_probs=224.1
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh--chh
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN--QLS 141 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~--~~~ 141 (435)
.++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... ...
T Consensus 2 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~ 79 (262)
T PRK05995 2 MYETLEIEQ-RGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAG-KAFCAGADLNWMKKMAGYSDD 79 (262)
T ss_pred CCceEEEEe-eCCEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CccccCcCHHHHhhhcccCch
Confidence 356788885 689999999999999999999999999999999999999999999998 8999999999875421 111
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchH
Q 013851 142 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 221 (435)
Q Consensus 142 ~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 221 (435)
..........+++..|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++ +++++|..
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~- 157 (262)
T PRK05995 80 ENRADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGER- 157 (262)
T ss_pred hhhhHHHHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHH-
Confidence 1112233455678889999999999999999999999999999999999999999999999999887764 88999998
Q ss_pred HHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhh
Q 013851 222 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 301 (435)
Q Consensus 222 ~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 301 (435)
++++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 158 ~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------ 194 (262)
T PRK05995 158 AARRYFLTAERFD-AAEALRLGLVHEVVPAEALDAKVD------------------------------------------ 194 (262)
T ss_pred HHHHHHHcCCccC-HHHHHHcCCCCeecCHHHHHHHHH------------------------------------------
Confidence 9999999999999 999999999999999877765333
Q ss_pred cCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHH-HHHHHHHH
Q 013851 302 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGV-MKYEYRVA 380 (435)
Q Consensus 302 F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~-l~~E~~~~ 380 (435)
++| ++|++.||.+++.+|++++... ..++.+. ++.|...+
T Consensus 195 --------------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~~e~~~~ 235 (262)
T PRK05995 195 --------------------------ELL----AALVANSPQAVRAGKRLVRDVA---------GRPIDAALIADTASRI 235 (262)
T ss_pred --------------------------HHH----HHHHhCCHHHHHHHHHHHHhhh---------cCChhhHHHHHHHHHH
Confidence 333 3688999999999999999865 4678888 88888888
Q ss_pred HHhCCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 381 LRSSLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 381 ~~~~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
...+.++|++||+++|+ +| |+|.|+++
T Consensus 236 ~~~~~~~d~~e~~~af~-~k-r~p~~~~~ 262 (262)
T PRK05995 236 ALIRATEEAREGVAAFL-EK-RKPAWRGR 262 (262)
T ss_pred HHHhcCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 88999999999999999 78 79999864
No 27
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-52 Score=404.48 Aligned_cols=251 Identities=20% Similarity=0.264 Sum_probs=219.2
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIE 145 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~ 145 (435)
+.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|++||+|||+|.| ++||+|+|++++........
T Consensus 3 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~--- 77 (254)
T PRK08252 3 DEVLVER-RGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAG-GTFCAGMDLKAFARGERPSI--- 77 (254)
T ss_pred ceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CceEcCcCHHHHhcccchhh---
Confidence 3477775 689999999999999999999999999999999999999999999997 89999999998864321111
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHH
Q 013851 146 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 225 (435)
Q Consensus 146 ~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~ 225 (435)
....+..++ ...+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. ++++
T Consensus 78 ~~~~~~~~~--~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~a~~ 154 (254)
T PRK08252 78 PGRGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYH-IAME 154 (254)
T ss_pred hHHHHHHHH--HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHH-HHHH
Confidence 111111221 2469999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCc
Q 013851 226 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 305 (435)
Q Consensus 226 l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~ 305 (435)
|++||++++ |+||+++||||++||++++.+.+.
T Consensus 155 l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 187 (254)
T PRK08252 155 LALTGDMLT-AERAHELGLVNRLTEPGQALDAAL---------------------------------------------- 187 (254)
T ss_pred HHHcCCccC-HHHHHHcCCcceecCcchHHHHHH----------------------------------------------
Confidence 999999999 999999999999999887764322
Q ss_pred ccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCC
Q 013851 306 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 385 (435)
Q Consensus 306 ~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~ 385 (435)
+.+++|+++||.+++.+|++++... ..++.++++.|...+...+.
T Consensus 188 --------------------------~~a~~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~ 232 (254)
T PRK08252 188 --------------------------ELAERIAANGPLAVAASKRIVVESG---------DWSEDEMFARQRELIAPVFT 232 (254)
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhc
Confidence 2334689999999999999999876 56799999999999999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCC
Q 013851 386 RSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 386 s~d~~egv~afl~~K~r~P~w~~ 408 (435)
++|++||+++|+ +| |+|+|..
T Consensus 233 ~~~~~eg~~af~-~k-r~p~~~~ 253 (254)
T PRK08252 233 SADAKEGATAFA-EK-RAPVWTG 253 (254)
T ss_pred CchHHHHHHHHh-cC-CCCCCCC
Confidence 999999999999 77 7999975
No 28
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-52 Score=406.53 Aligned_cols=252 Identities=20% Similarity=0.227 Sum_probs=219.7
Q ss_pred EEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHH
Q 013851 69 KGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFT 148 (435)
Q Consensus 69 ~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~ 148 (435)
.++. +++|++||||||++.|+||.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++..... .....+..
T Consensus 2 ~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g-~~F~aG~Dl~~~~~~~~-~~~~~~~~ 78 (255)
T PRK06563 2 SRER-RGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHG-EHFTAGLDLADVAPKLA-AGGFPFPE 78 (255)
T ss_pred eEEE-ECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CCCcCCcCHHHHhhccc-cchhhhhh
Confidence 4554 689999999999999999999999999999999999999999999998 89999999998754221 11111222
Q ss_pred HHHHHH-HHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHh
Q 013851 149 AEYSLI-CKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 227 (435)
Q Consensus 149 ~~~~l~-~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ 227 (435)
...+.+ ..+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. ++++|+
T Consensus 79 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ 157 (255)
T PRK06563 79 GGIDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWG-NAMRYL 157 (255)
T ss_pred hhhHHHHHHHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHH-HHHHHH
Confidence 222323 357889999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred hcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCccc
Q 013851 228 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKS 307 (435)
Q Consensus 228 ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s 307 (435)
+||++++ |+||+++||||++||++++.+.+.
T Consensus 158 ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------------ 188 (255)
T PRK06563 158 LTGDEFD-AQEALRLGLVQEVVPPGEQLERAI------------------------------------------------ 188 (255)
T ss_pred HcCCCcC-HHHHHHcCCCcEeeCHHHHHHHHH------------------------------------------------
Confidence 9999999 999999999999999877754322
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCCc
Q 013851 308 VRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRS 387 (435)
Q Consensus 308 ~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~ 387 (435)
+|++ +|+++||.+++.+|++++... ..++.++++.|...+...+.++
T Consensus 189 --------------------~~a~----~la~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~~~~~~ 235 (255)
T PRK06563 189 --------------------ELAE----RIARAAPLGVQATLASARAAV---------REGEAAAAAQLPPELRPLFTSE 235 (255)
T ss_pred --------------------HHHH----HHHhcCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhcCc
Confidence 3333 688999999999999999875 5679999999999999999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCC
Q 013851 388 DFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 388 d~~egv~afl~~K~r~P~w~~ 408 (435)
|++||+++|+ +| |+|.|++
T Consensus 236 d~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK06563 236 DAKEGVQAFL-ER-RPARFKG 254 (255)
T ss_pred hHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999 78 7999975
No 29
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-52 Score=405.16 Aligned_cols=250 Identities=21% Similarity=0.304 Sum_probs=222.1
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHH
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMI 144 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~ 144 (435)
..++.++..+++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++.... .....
T Consensus 5 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~ 83 (256)
T PRK06143 5 NAHAGVTRDDRGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLD-QASAE 83 (256)
T ss_pred cccceeeecCCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhcC-hhhHH
Confidence 35577775578999999999999999999999999999999999999999999999867999999999875432 22233
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 145 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 145 ~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
.+......++..|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|+ |++|++++|++++|.. +++
T Consensus 84 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~-~a~ 161 (256)
T PRK06143 84 AFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWA-RTR 161 (256)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHH-HHH
Confidence 34455567888999999999999999999999999999999999999999999999998 8888899999999998 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
+|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 162 ~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 195 (256)
T PRK06143 162 WLLLTGETID-AAQALAWGLVDRVVPLAELDAAVE--------------------------------------------- 195 (256)
T ss_pred HHHHcCCcCC-HHHHHHCCCcCeecCHHHHHHHHH---------------------------------------------
Confidence 9999999999 999999999999999887764333
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhC
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 384 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~ 384 (435)
++| ++|+.+||.+++.+|++++... ..++.+.++.|...+...+
T Consensus 196 -----------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~ 239 (256)
T PRK06143 196 -----------------------RLA----ASLAGCGPQALRQQKRLLREWE---------DMPLDVAIDDSVAEFGAAF 239 (256)
T ss_pred -----------------------HHH----HHHHcCCHHHHHHHHHHHHHHc---------cCCHHHHHHHHHHHHHHHh
Confidence 333 3699999999999999999875 5679999999999999999
Q ss_pred CCchHHHHHHHHHhcC
Q 013851 385 LRSDFAEGVRAVLVDK 400 (435)
Q Consensus 385 ~s~d~~egv~afl~~K 400 (435)
.++|++||+++|+ +|
T Consensus 240 ~~~d~~e~~~af~-ek 254 (256)
T PRK06143 240 LTGEPQRHMAAFL-NR 254 (256)
T ss_pred cChHHHHHHHHHH-hh
Confidence 9999999999999 66
No 30
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=1.2e-52 Score=406.87 Aligned_cols=256 Identities=20% Similarity=0.276 Sum_probs=217.8
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEV 146 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 146 (435)
.+.++..+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++............
T Consensus 3 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (259)
T TIGR01929 3 DIRYEKSTDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYIDDSGVH 82 (259)
T ss_pred eEEEEEcCCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhccccchhhHH
Confidence 46676426899999999999999999999999999999999999999999999986799999999986432100110001
Q ss_pred HHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHH
Q 013851 147 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 226 (435)
Q Consensus 147 ~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l 226 (435)
......++..+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. ++++|
T Consensus 83 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~-~a~~l 161 (259)
T TIGR01929 83 RLNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQK-KAREI 161 (259)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHH-HHHHH
Confidence 11234567788999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcc
Q 013851 227 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 306 (435)
Q Consensus 227 ~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~ 306 (435)
++||++++ |+||+++|||+++||++++.+.+.
T Consensus 162 ~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 193 (259)
T TIGR01929 162 WFLCRQYD-AEQALDMGLVNTVVPLADLEKETV----------------------------------------------- 193 (259)
T ss_pred HHhCCccC-HHHHHHcCCcccccCHHHHHHHHH-----------------------------------------------
Confidence 99999999 999999999999999877754332
Q ss_pred cHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCC
Q 013851 307 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 386 (435)
Q Consensus 307 s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s 386 (435)
++| ++|++.||.+++.+|++++... . .....+..|...+...+.+
T Consensus 194 ---------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~-~~~~~~~~e~~~~~~~~~~ 238 (259)
T TIGR01929 194 ---------------------RWC----REILQKSPMAIRMLKAALNADC---------D-GQAGLQELAGNATMLFYMT 238 (259)
T ss_pred ---------------------HHH----HHHHhCCHHHHHHHHHHHHhhh---------c-cchHHHHHHHHHHHHHhcC
Confidence 333 3699999999999999998764 2 2455566677888888999
Q ss_pred chHHHHHHHHHhcCCCCCCCCC
Q 013851 387 SDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 387 ~d~~egv~afl~~K~r~P~w~~ 408 (435)
+|++||+++|+ +| |+|+|+.
T Consensus 239 ~d~~egi~af~-~k-r~p~~~~ 258 (259)
T TIGR01929 239 EEGQEGRNAFL-EK-RQPDFSK 258 (259)
T ss_pred ccHHHHHHHHh-cc-CCCCCCC
Confidence 99999999999 78 8999974
No 31
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-52 Score=405.73 Aligned_cols=257 Identities=23% Similarity=0.350 Sum_probs=222.3
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc--hhH
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ--LSE 142 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~--~~~ 142 (435)
++.+.++.++++|++|+||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++..... ...
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~ 81 (262)
T PRK07468 3 FETIRIAVDARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAG-KSFCAGGDLGWMRAQMTADRAT 81 (262)
T ss_pred cceEEEEEcCCcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CcccCCcCHHHHHhhcccchhh
Confidence 556778753468999999999999999999999999999999999999999999998 89999999998753211 111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
.......+..++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++ +|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~~-vG~~-~ 159 (262)
T PRK07468 82 RIEEARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVAR-MGEA-N 159 (262)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHhh-ccHH-H
Confidence 1122334456788899999999999999999999999999999999999999999999999999999986655 8998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||++++ |+||+++|||+++||.+++.+.+.+
T Consensus 160 a~~lll~g~~~~-a~eA~~~Glv~~v~~~~~l~~~~~~------------------------------------------ 196 (262)
T PRK07468 160 ARRVFMSARLFD-AEEAVRLGLLSRVVPAERLDAAVEA------------------------------------------ 196 (262)
T ss_pred HHHHHHhCCccC-HHHHHHcCCcceecCHHHHHHHHHH------------------------------------------
Confidence 999999999999 9999999999999998776543332
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
++ ++|+++||.+++.+|++++... ...+.+.++.|...+..
T Consensus 197 --------------------------~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~ 237 (262)
T PRK07468 197 --------------------------EV----TPYLSCAPGAVAAAKALVRALG---------APIDEAVIDATIEALAD 237 (262)
T ss_pred --------------------------HH----HHHHhcCHHHHHHHHHHHHhhh---------ccChHHHHHHHHHHHHH
Confidence 33 3688999999999999998765 45678899999999999
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
.+.++|++||+++|+ +| |+|+|+.
T Consensus 238 ~~~s~d~~e~~~af~-~k-r~~~~~~ 261 (262)
T PRK07468 238 TWETEEAREGIAAFF-DK-RAPAWRG 261 (262)
T ss_pred HhcCHHHHHHHHHHH-cC-CCCCCCC
Confidence 999999999999999 78 7999964
No 32
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-52 Score=406.60 Aligned_cols=255 Identities=22% Similarity=0.326 Sum_probs=224.3
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc-----h
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNL-DMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ-----L 140 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~-~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~-----~ 140 (435)
.+.++. +++|++||||||++.|++|. +|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... .
T Consensus 4 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 81 (266)
T PRK09245 4 FLLVER-DGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAG-TAFSSGGNVKDMRARVGAFGGSP 81 (266)
T ss_pred ceEEEE-ECCEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcccCcCHHHHhhccccccccc
Confidence 477775 68999999999999999995 9999999999999999999999999998 89999999999854211 1
Q ss_pred hHHHH-HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCc
Q 013851 141 SEMIE-VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 219 (435)
Q Consensus 141 ~~~~~-~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~ 219 (435)
..... +...+..++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~ 161 (266)
T PRK09245 82 ADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGM 161 (266)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhH
Confidence 11112 22234467788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHH
Q 013851 220 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 299 (435)
Q Consensus 220 ~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 299 (435)
. ++++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 162 ~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------- 199 (266)
T PRK09245 162 A-RAAEMAFTGDAID-AATALEWGLVSRVVPADQLLPAAR---------------------------------------- 199 (266)
T ss_pred H-HHHHHHHcCCCcC-HHHHHHcCCcceecCHHHHHHHHH----------------------------------------
Confidence 7 9999999999999 999999999999999887764332
Q ss_pred hhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHH
Q 013851 300 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 379 (435)
Q Consensus 300 ~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~ 379 (435)
+++ ++|+++||.+++.+|++++... ..++.+.++.|...
T Consensus 200 ----------------------------~~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~ 238 (266)
T PRK09245 200 ----------------------------ALA----ERIAANPPHALRLTKRLLREGQ---------HASLDTLLELSAAY 238 (266)
T ss_pred ----------------------------HHH----HHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHH
Confidence 333 3699999999999999999875 56799999999999
Q ss_pred HHHhCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 380 ALRSSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 380 ~~~~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
+...+.++|++||+++|+ +| |+|.|+.
T Consensus 239 ~~~~~~~~d~~eg~~af~-~k-r~p~~~~ 265 (266)
T PRK09245 239 QALAHHTADHREAVDAFL-EK-RPPVFTG 265 (266)
T ss_pred HHHHhcCHhHHHHHHHHH-cC-CCCCCCC
Confidence 999999999999999999 78 7999975
No 33
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.4e-52 Score=407.54 Aligned_cols=255 Identities=24% Similarity=0.329 Sum_probs=226.0
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh---chhHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN---QLSEM 143 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~---~~~~~ 143 (435)
.+.++. +++|++|+||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... .....
T Consensus 18 ~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~~~~~~ 95 (277)
T PRK08258 18 HFLWEV-DDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAG-GNFCSGGDVHEIIGPLTKMDMPEL 95 (277)
T ss_pred ceEEEE-ECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCC-CCcccccCHHHHhccccccChhHH
Confidence 677875 789999999999999999999999999999999999999999999997 8999999999874321 11222
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCC-ChhHHHHHhhCCCchHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFP-DVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P-~~g~~~~l~r~~G~~~~ 222 (435)
..+.....+++..|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++| ++|++++|++++|.. +
T Consensus 96 ~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~-~ 174 (277)
T PRK08258 96 LAFTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQG-R 174 (277)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHH-H
Confidence 23444445678899999999999999999999999999999999999999999999999995 789999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 175 a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 210 (277)
T PRK08258 175 ASELLYTGRSMS-AEEGERWGFFNRLVEPEELLAEAQ------------------------------------------- 210 (277)
T ss_pred HHHHHHcCCCCC-HHHHHHcCCCcEecCHHHHHHHHH-------------------------------------------
Confidence 999999999999 999999999999999877764332
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
++| ++|+++||.+++.+|++++... ..++.+.++.|...+..
T Consensus 211 -------------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~ 252 (277)
T PRK08258 211 -------------------------ALA----RRLAAGPTFAHGMTKTMLHQEW---------DMGLEEAIEAEAQAQAI 252 (277)
T ss_pred -------------------------HHH----HHHHhCCHHHHHHHHHHHHhhc---------cCCHHHHHHHHHHHHHH
Confidence 333 3699999999999999999875 56799999999999999
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
++.++|++||+++|+ +| |+|+|++
T Consensus 253 ~~~s~d~~eg~~af~-ek-r~p~~~~ 276 (277)
T PRK08258 253 CMQTEDFRRAYEAFV-AK-RKPVFEG 276 (277)
T ss_pred HhcCchHHHHHHHHh-cC-CCCCCCC
Confidence 999999999999999 78 7999975
No 34
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.2e-52 Score=405.57 Aligned_cols=258 Identities=23% Similarity=0.375 Sum_probs=227.1
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC-CceEEEEEeCCCCccccCCCchhhhhhhch--
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDP-RVKCVLIEGSGPRAFCAGGDVKEISTQNQL-- 140 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~-~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~-- 140 (435)
.|+.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+ ++|+|||+|.| ++||+|+|++++......
T Consensus 2 ~~~~v~~~~-~~~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g-~~F~aG~Dl~~~~~~~~~~~ 79 (266)
T PRK05981 2 QFKKVTLDF-DGGVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAG-RGFCTGANLQGRGSGGRESD 79 (266)
T ss_pred CcceEEEEe-ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CCcccccCHHhhhccccccc
Confidence 467788885 6899999999999999999999999999999999876 49999999998 899999999997543210
Q ss_pred ---hHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCC
Q 013851 141 ---SEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGP 217 (435)
Q Consensus 141 ---~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~ 217 (435)
.....+...+..++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~v 159 (266)
T PRK05981 80 SGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLV 159 (266)
T ss_pred ccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHh
Confidence 11122333345678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhH
Q 013851 218 GGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQ 297 (435)
Q Consensus 218 G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (435)
|.. .+++|++||++++ |+||+++|||+++||++++.+.+.
T Consensus 160 g~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~~~~~a~-------------------------------------- 199 (266)
T PRK05981 160 GKA-RAMELSLLGEKLP-AETALQWGLVNRVVDDAELMAEAM-------------------------------------- 199 (266)
T ss_pred HHH-HHHHHHHhCCCcC-HHHHHHcCCceEeeCHhHHHHHHH--------------------------------------
Confidence 998 9999999999999 999999999999999887764322
Q ss_pred HHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHH
Q 013851 298 ITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEY 377 (435)
Q Consensus 298 i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~ 377 (435)
+||+ +|+.+||.+++.+|++++... ..++.+.++.|.
T Consensus 200 ------------------------------~~a~----~l~~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~ 236 (266)
T PRK05981 200 ------------------------------KLAH----ELANGPTVALGLIRKLYWDSP---------ENDFEEQLNLER 236 (266)
T ss_pred ------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh---------hcCHHHHHHHHH
Confidence 3333 688999999999999998875 567999999999
Q ss_pred HHHHHhCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 378 RVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 378 ~~~~~~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
..+...+.++|++||+.+|+ +| |+|+|+.
T Consensus 237 ~~~~~~~~s~d~~e~~~af~-~k-r~~~~~~ 265 (266)
T PRK05981 237 EAQRIAGKTEDFKEGVGAFL-QK-RPAQFKG 265 (266)
T ss_pred HHHHHHhcChhHHHHHHHHh-cC-CCCCCCC
Confidence 99999999999999999999 78 7999975
No 35
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-52 Score=404.69 Aligned_cols=257 Identities=28% Similarity=0.382 Sum_probs=227.5
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEM 143 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~ 143 (435)
.++.+.++. +++|++|+||||++.|++|.+|+.+|.++++.+ .|+++|+|||+|.| ++||+|+|++++.........
T Consensus 4 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g-~~F~aG~Dl~~~~~~~~~~~~ 80 (260)
T PRK07659 4 KMESVVVKY-EGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNG-RGFSAGGDIKMMLSSNDESKF 80 (260)
T ss_pred CCceEEEEe-eCCEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCC-CCcccccCHHHHhhccCchhH
Confidence 345688885 689999999999999999999999999999999 58899999999997 899999999998643222233
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 223 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a 223 (435)
..++....+++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~-~a 159 (260)
T PRK07659 81 DGVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGEN-KA 159 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHH-HH
Confidence 44555666788899999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcC
Q 013851 224 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 303 (435)
Q Consensus 224 ~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 303 (435)
++|++||+.++ |+||+++||||++| ++++.+.+.
T Consensus 160 ~~l~ltg~~~~-a~eA~~~Glv~~vv-~~~~~~~a~-------------------------------------------- 193 (260)
T PRK07659 160 KQIIWEGKKLS-ATEALDLGLIDEVI-GGDFQTAAK-------------------------------------------- 193 (260)
T ss_pred HHHHHhCCccC-HHHHHHcCChHHHh-hhHHHHHHH--------------------------------------------
Confidence 99999999999 99999999999999 666654322
Q ss_pred CcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHh
Q 013851 304 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 383 (435)
Q Consensus 304 ~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~ 383 (435)
+++ ++|+++||.+++.+|++++... ..++.+.++.|...+...
T Consensus 194 ------------------------~~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~ 236 (260)
T PRK07659 194 ------------------------QKI----SEWLQKPLKAMIETKQIYCELN---------RSQLEQVLQLEKRAQYAM 236 (260)
T ss_pred ------------------------HHH----HHHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHH
Confidence 233 3689999999999999999875 567999999999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 384 SLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 384 ~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
+.++|++||+.+|+ +| |+|+|+++
T Consensus 237 ~~~~~~~egi~af~-~k-r~p~~~~~ 260 (260)
T PRK07659 237 RQTADHKEGIRAFL-EK-RLPVFKGE 260 (260)
T ss_pred hcCHhHHHHHHHHh-cC-CCCCCCCC
Confidence 99999999999999 78 79999753
No 36
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.5e-52 Score=404.33 Aligned_cols=255 Identities=23% Similarity=0.336 Sum_probs=220.5
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEM 143 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~ 143 (435)
..+.+.++. +++|++|+||||+++|+||.+|+++|.++++.++.|+++|+|||+|.|+++||+|+|++++......+..
T Consensus 6 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~ 84 (262)
T PRK06144 6 STDELLLEV-RGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFSTAEDA 84 (262)
T ss_pred CCCceEEEe-eCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhccchhHH
Confidence 356688885 6899999999999999999999999999999999999999999999986799999999987543211222
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEeccccc-CCCCCChhHHHHHhhCCCchHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG-IGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~-~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
..+.....+++..|.++||||||+|||+|+|||++|+++||||||+++++|++||++ +|++|++|++++|++++|.. +
T Consensus 85 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~~-~ 163 (262)
T PRK06144 85 VAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGAA-R 163 (262)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCHH-H
Confidence 233344556788899999999999999999999999999999999999999999997 99999999999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
++++++||++++ |+||+++||||++||++++.+.+.
T Consensus 164 a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 199 (262)
T PRK06144 164 VKDMLFTARLLE-AEEALAAGLVNEVVEDAALDARAD------------------------------------------- 199 (262)
T ss_pred HHHHHHcCCCcC-HHHHHHcCCcCeecCHHHHHHHHH-------------------------------------------
Confidence 999999999999 999999999999999877764332
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
++| ++|+++||.+++.+|+.++... ...+ +.+.+.+..
T Consensus 200 -------------------------~~a----~~i~~~~~~a~~~~K~~l~~~~---------~~~l----~~~~~~~~~ 237 (262)
T PRK06144 200 -------------------------ALA----ELLAAHAPLTLRATKEALRRLR---------REGL----PDGDDLIRM 237 (262)
T ss_pred -------------------------HHH----HHHHhCCHHHHHHHHHHHHHhh---------hcCH----HHHHHHHHH
Confidence 333 3699999999999999998765 2333 445567777
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
.+.++|++||+.+|+ +| |+|.|++
T Consensus 238 ~~~~~~~~e~~~af~-~k-r~p~~~~ 261 (262)
T PRK06144 238 CYMSEDFREGVEAFL-EK-RPPKWKG 261 (262)
T ss_pred HhcChHHHHHHHHHh-cC-CCCCCCC
Confidence 889999999999999 78 7999975
No 37
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=2.7e-52 Score=405.74 Aligned_cols=258 Identities=23% Similarity=0.345 Sum_probs=220.9
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhch--h
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQL--S 141 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~--~ 141 (435)
.|+.+.++.++++|++||||||+++|++|.+|+.+|.++++.++.|++||+|||+|.| ++||+|+|++++...... .
T Consensus 3 ~~~~l~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~ 81 (265)
T PRK05674 3 DFQTIELIRDPRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRG-RHFSAGADLAWMQQSADLDYN 81 (265)
T ss_pred CcceEEEEEcCCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCcccCcCHHHHhhcccccch
Confidence 3777888864478999999999999999999999999999999999999999999998 899999999987532110 0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchH
Q 013851 142 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 221 (435)
Q Consensus 142 ~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 221 (435)
..........+++..+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++ ++++++|.+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~-~l~~~vG~~- 159 (265)
T PRK05674 82 TNLDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISP-FVVKAIGER- 159 (265)
T ss_pred hhhHHHHHHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHH-HHHHHhCHH-
Confidence 111122334567888999999999999999999999999999999999999999999999999988766 488999998
Q ss_pred HHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhh
Q 013851 222 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 301 (435)
Q Consensus 222 ~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 301 (435)
++++|+|||+.|+ |+||+++|||+++||++++.+.+.
T Consensus 160 ~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------ 196 (265)
T PRK05674 160 AARRYALTAERFD-GRRARELGLLAESYPAAELEAQVE------------------------------------------ 196 (265)
T ss_pred HHHHHHHhCcccC-HHHHHHCCCcceecCHHHHHHHHH------------------------------------------
Confidence 9999999999999 999999999999999877764332
Q ss_pred cCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHH-HHHHH
Q 013851 302 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKY-EYRVA 380 (435)
Q Consensus 302 F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~-E~~~~ 380 (435)
+||+ +|+++||.+++.+|++++... ..++.+.+.. +...+
T Consensus 197 --------------------------~~a~----~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~~~~~~ 237 (265)
T PRK05674 197 --------------------------AWIA----NLLLNSPQALRASKDLLREVG---------DGELSPALRRYCENAI 237 (265)
T ss_pred --------------------------HHHH----HHHhcCHHHHHHHHHHHHHhh---------ccChhHHHHHHHHHHH
Confidence 3343 689999999999999999876 5668788765 45677
Q ss_pred HHhCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 381 LRSSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 381 ~~~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
...+.++|++||+++|+ +| |+|+|+.
T Consensus 238 ~~~~~s~d~~e~~~af~-~k-r~p~~~~ 263 (265)
T PRK05674 238 ARIRVSAEGQEGLRAFL-EK-RTPAWQT 263 (265)
T ss_pred HHHhcCHHHHHHHHHHH-cc-CCCCCCC
Confidence 77889999999999999 77 7999974
No 38
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=3.1e-52 Score=403.41 Aligned_cols=255 Identities=20% Similarity=0.236 Sum_probs=215.2
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHH
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMI 144 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~ 144 (435)
|+.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|++||+|||+|.|+++||+|+|++++...... ..
T Consensus 1 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~--~~ 77 (256)
T TIGR03210 1 YEDILYEK-RNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGGYDG--RG 77 (256)
T ss_pred CCceEEEe-eCCEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhccccc--hh
Confidence 35577875 6899999999999999999999999999999999999999999999987799999999987432111 11
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 145 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 145 ~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
.+......++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 78 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~-~A~ 156 (256)
T TIGR03210 78 TIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEK-KAR 156 (256)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHH-HHH
Confidence 1222335677889999999999999999999999999999999999999999999999998888899999999998 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
+|++||++++ |+||+++||||++||++++.+.+.+
T Consensus 157 ~lll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~-------------------------------------------- 191 (256)
T TIGR03210 157 EIWYLCRRYT-AQEALAMGLVNAVVPHDQLDAEVQK-------------------------------------------- 191 (256)
T ss_pred HHHHhCCCcC-HHHHHHcCCceeeeCHHHHHHHHHH--------------------------------------------
Confidence 9999999999 9999999999999998877653333
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhC
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 384 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~ 384 (435)
+| ++|+++||.+++.+|++++.... ...-.+. .|...+...+
T Consensus 192 ------------------------~a----~~ia~~~~~a~~~~K~~l~~~~~--------~~~~~~~--~~~~~~~~~~ 233 (256)
T TIGR03210 192 ------------------------WC----DEIVEKSPTAIAIAKRSFNMDTA--------HQRGIAG--MGMYALKLYY 233 (256)
T ss_pred ------------------------HH----HHHHhCCHHHHHHHHHHHHHhhc--------ccchHHH--HHHHHHHHHc
Confidence 33 36999999999999999987641 1111112 2445667788
Q ss_pred CCchHHHHHHHHHhcCCCCCCCCC
Q 013851 385 LRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 385 ~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
.++|++||+++|+ +| |+|.|++
T Consensus 234 ~~~d~~e~~~af~-~k-r~p~~~~ 255 (256)
T TIGR03210 234 DTAESREGVKAFQ-EK-RKPEFRK 255 (256)
T ss_pred cChhHHHHHHHHh-cc-CCCCCCC
Confidence 9999999999999 78 7999974
No 39
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.1e-52 Score=404.48 Aligned_cols=258 Identities=20% Similarity=0.255 Sum_probs=219.6
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhch-hH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQL-SE 142 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~-~~ 142 (435)
.++.|.++.++++|++|+||||++.|++|.+|+.+|.++|+.++.|+++|+|||||.| ++||+|+|++++...... ..
T Consensus 9 ~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~ 87 (268)
T PRK07327 9 DYPALRFDRPPPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEG-KAFSAGGDLALVEEMADDFEV 87 (268)
T ss_pred CCCeEEEEecCCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCC-CCcccccCHHHHhhccCcHHH
Confidence 4677888864578999999999999999999999999999999999999999999998 899999999987543211 22
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...++.....++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +
T Consensus 88 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~ 166 (268)
T PRK07327 88 RARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMA-K 166 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHH-H
Confidence 223444456778889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||++++ |+||+++|||+++||++++.+.+.+
T Consensus 167 a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~------------------------------------------ 203 (268)
T PRK07327 167 AKYYLLLCEPVS-GEEAERIGLVSLAVDDDELLPKALE------------------------------------------ 203 (268)
T ss_pred HHHHHHcCCccC-HHHHHHcCCcceecCHHHHHHHHHH------------------------------------------
Confidence 999999999999 9999999999999998877643332
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
+| ++|+++||.+++.+|++++..... ....+++.+..| ..
T Consensus 204 --------------------------~a----~~la~~~~~a~~~~K~~l~~~~~~------~~~~~~~~~~~~----~~ 243 (268)
T PRK07327 204 --------------------------VA----ERLAAGSQTAIRWTKYALNNWLRM------AGPTFDTSLALE----FM 243 (268)
T ss_pred --------------------------HH----HHHHcCCHHHHHHHHHHHHHhhhh------hhhhHHHHHHHH----HH
Confidence 33 369999999999999999975310 012355555544 34
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
.+.++|++||+.+|+ +| |+|.|++
T Consensus 244 ~~~~~d~~eg~~af~-ek-r~p~~~~ 267 (268)
T PRK07327 244 GFSGPDVREGLASLR-EK-RAPDFPG 267 (268)
T ss_pred HccChhHHHHHHHHH-hc-CCCCCCC
Confidence 678999999999999 78 7999975
No 40
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=5.8e-52 Score=402.51 Aligned_cols=258 Identities=16% Similarity=0.242 Sum_probs=223.8
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCccccCCCchhhhhhhchhH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSG-PRAFCAGGDVKEISTQNQLSE 142 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g-~~~F~aG~Dl~~~~~~~~~~~ 142 (435)
+++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+ +|+|||+|.| +++||+|+|++++.... ..
T Consensus 2 ~~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~--~~ 77 (261)
T PRK11423 2 SMQYVNVVT-INKIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGG--RD 77 (261)
T ss_pred CccceEEEe-ECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhcc--cc
Confidence 466788886 6999999999999999999999999999999999988 9999999964 48999999999875422 11
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...+.....+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +
T Consensus 78 ~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~-~ 156 (261)
T PRK11423 78 PLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFH-I 156 (261)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHH-H
Confidence 122334455678889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|+++|++++ |+||+++||||++||++++.+.+
T Consensus 157 a~~l~l~g~~~~-a~eA~~~GLv~~vv~~~~l~~~a-------------------------------------------- 191 (261)
T PRK11423 157 VKEMFFTASPIT-AQRALAVGILNHVVEVEELEDFT-------------------------------------------- 191 (261)
T ss_pred HHHHHHcCCCcC-HHHHHHcCCcCcccCHHHHHHHH--------------------------------------------
Confidence 999999999999 99999999999999987776433
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCH-HHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKL-SGVMKYEYRVAL 381 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l-~~~l~~E~~~~~ 381 (435)
.+.+++|+++||.+++.+|++++... ....+ .+.++.|.....
T Consensus 192 ----------------------------~~~a~~l~~~~~~a~~~~K~~~~~~~--------~~~~~~~~~~~~~~~~~~ 235 (261)
T PRK11423 192 ----------------------------LQMAHHISEKAPLAIAVIKEQLRVLG--------EAHPMNPDEFERIQGLRR 235 (261)
T ss_pred ----------------------------HHHHHHHHhcCHHHHHHHHHHHHhhc--------ccCCcchHHHHHHHHHHH
Confidence 23334799999999999999998654 11233 678888989989
Q ss_pred HhCCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 382 RSSLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 382 ~~~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
..+.++|++||+.+|+ +| |+|+|+.+
T Consensus 236 ~~~~s~d~~eg~~af~-~k-r~p~~~~~ 261 (261)
T PRK11423 236 AVYDSEDYQEGMNAFL-EK-RKPVFVGH 261 (261)
T ss_pred HHhCChhHHHHHHHHh-cc-CCCCCCCC
Confidence 9999999999999999 78 89999753
No 41
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=9.1e-52 Score=401.27 Aligned_cols=253 Identities=23% Similarity=0.379 Sum_probs=220.8
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEV 146 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 146 (435)
.+.++. +++|++||||||+ .|++|.+|+.+|.++++.++.|++||+|||+|.|+++||+|+|++++....... ..+
T Consensus 4 ~i~~~~-~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~~~~--~~~ 79 (261)
T PRK03580 4 SLHTTR-NGSILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPD--ADF 79 (261)
T ss_pred eEEEEE-ECCEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccCcch--hhh
Confidence 477775 6899999999996 599999999999999999999999999999999877999999999875432111 112
Q ss_pred HHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHH
Q 013851 147 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 226 (435)
Q Consensus 147 ~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l 226 (435)
....+..+.++..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +++++
T Consensus 80 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~-~a~~l 158 (261)
T PRK03580 80 GPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPA-IANEM 158 (261)
T ss_pred hhhhhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHH-HHHHH
Confidence 22234466788999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcc
Q 013851 227 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 306 (435)
Q Consensus 227 ~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~ 306 (435)
++||++++ |+||+++|||+++||++++.+.+.
T Consensus 159 ~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 190 (261)
T PRK03580 159 VMTGRRMD-AEEALRWGIVNRVVPQAELMDRAR----------------------------------------------- 190 (261)
T ss_pred HHhCCccC-HHHHHHcCCCcEecCHhHHHHHHH-----------------------------------------------
Confidence 99999999 999999999999999888765333
Q ss_pred cHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHH----HHHH
Q 013851 307 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR----VALR 382 (435)
Q Consensus 307 s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~----~~~~ 382 (435)
+|+ ++|+++||.+++.+|++++... ..++.+.++.|.. .+..
T Consensus 191 ---------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~ 236 (261)
T PRK03580 191 ---------------------ELA----QQLVNSAPLAIAALKEIYRETS---------EMPVEEAYRYIRSGVLKHYPS 236 (261)
T ss_pred ---------------------HHH----HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHhhhHHHHHH
Confidence 333 3689999999999999999876 5679999998874 6677
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
.+.++|++||+++|+ +| |+|.|+.
T Consensus 237 ~~~~~d~~e~~~af~-ek-r~~~~~~ 260 (261)
T PRK03580 237 VLHSEDALEGPRAFA-EK-RDPVWKG 260 (261)
T ss_pred HhcCccHHHHHHHHh-cC-CCCCCCC
Confidence 889999999999999 78 7999975
No 42
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-51 Score=400.20 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=226.2
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh--chhHHHH
Q 013851 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN--QLSEMIE 145 (435)
Q Consensus 68 i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~--~~~~~~~ 145 (435)
+.++. +++|++|+||||++.|++|.+|+.+|.++++.++.|++||+|||+|.| ++||+|+|++++.... .......
T Consensus 5 ~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~~ 82 (260)
T PRK07511 5 LLSRR-EGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAG-GFFCAGGNLNRLLENRAKPPSVQAA 82 (260)
T ss_pred eEEEe-ECCEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCC-CCcccCcCHHHHhhcccccchhHHH
Confidence 66774 789999999999999999999999999999999999999999999997 8999999999876422 1122333
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHH
Q 013851 146 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 225 (435)
Q Consensus 146 ~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~ 225 (435)
++...++++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++
T Consensus 83 ~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~a~~ 161 (260)
T PRK07511 83 SIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQ-LATE 161 (260)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHH-HHHH
Confidence 455567788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCc
Q 013851 226 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 305 (435)
Q Consensus 226 l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~ 305 (435)
|++||++++ |+||+++||||++||++++.+.+.
T Consensus 162 l~ltg~~~~-a~eA~~~Glv~~vv~~~~~~~~a~---------------------------------------------- 194 (260)
T PRK07511 162 LLLEGKPIS-AERLHALGVVNRLAEPGQALAEAL---------------------------------------------- 194 (260)
T ss_pred HHHhCCCCC-HHHHHHcCCccEeeCchHHHHHHH----------------------------------------------
Confidence 999999999 999999999999999877654222
Q ss_pred ccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCC
Q 013851 306 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 385 (435)
Q Consensus 306 ~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~ 385 (435)
+|++ +|+++||.+++.+|+.++... ..++.++++.|...+...+.
T Consensus 195 ----------------------~~a~----~l~~~~~~~~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 239 (260)
T PRK07511 195 ----------------------ALAD----QLAAGSPNALARIKSLIADAP---------EATLAAQLEAERDHFVASLH 239 (260)
T ss_pred ----------------------HHHH----HHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHHhc
Confidence 3343 688999999999999999876 56899999999999999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCC
Q 013851 386 RSDFAEGVRAVLVDKDQNPKWN 407 (435)
Q Consensus 386 s~d~~egv~afl~~K~r~P~w~ 407 (435)
++|+++|+++|+ +| |+|.|+
T Consensus 240 ~~~~~~~i~~f~-~~-r~~~~~ 259 (260)
T PRK07511 240 HADALEGIAAFL-EK-RAPDYK 259 (260)
T ss_pred CchHHHHHHHHh-cc-CCCCCC
Confidence 999999999999 77 799996
No 43
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=1.3e-51 Score=402.86 Aligned_cols=251 Identities=25% Similarity=0.312 Sum_probs=218.2
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc--hh
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ--LS 141 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~--~~ 141 (435)
.|+.|.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... ..
T Consensus 6 ~~~~i~~~~-~~~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~ 83 (275)
T PRK09120 6 RWDTVKVEV-EDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAG-DAWSAGMDLKEYFRETDAQPE 83 (275)
T ss_pred ccccEEEEE-ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCC-CceecCcCHHHHhhccccchh
Confidence 467788885 689999999999999999999999999999999999999999999998 89999999998753221 11
Q ss_pred -HHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCch
Q 013851 142 -EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 220 (435)
Q Consensus 142 -~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 220 (435)
.........+.++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~ 163 (275)
T PRK09120 84 ILQERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHR 163 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHH
Confidence 1122233345677889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHh
Q 013851 221 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 300 (435)
Q Consensus 221 ~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 300 (435)
++++|++||++++ |+||+++|||+++||++++++.+.+
T Consensus 164 -~a~~llltg~~~~-A~eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------- 201 (275)
T PRK09120 164 -DALYYIMTGETFT-GRKAAEMGLVNESVPLAQLRARTRE---------------------------------------- 201 (275)
T ss_pred -HHHHHHhcCCccC-HHHHHHcCCcceecCHHHHHHHHHH----------------------------------------
Confidence 9999999999999 9999999999999998887653333
Q ss_pred hcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHH-
Q 013851 301 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV- 379 (435)
Q Consensus 301 ~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~- 379 (435)
++ ++|+++||.+++.+|++++... ..++.+.++.|...
T Consensus 202 ----------------------------~a----~~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~ 240 (275)
T PRK09120 202 ----------------------------LA----AKLLEKNPVVLRAAKDGFKRVR---------ELTWDQAEDYLYAKL 240 (275)
T ss_pred ----------------------------HH----HHHHhCCHHHHHHHHHHHHHHH---------hCCHHHHHHHHHHHH
Confidence 33 3699999999999999999876 56799998887654
Q ss_pred -HHHhCCCc-hHHHHHHHHHhcC
Q 013851 380 -ALRSSLRS-DFAEGVRAVLVDK 400 (435)
Q Consensus 380 -~~~~~~s~-d~~egv~afl~~K 400 (435)
....+.++ |++||+++|+ +|
T Consensus 241 ~~~~~~~~~~d~~eg~~afl-~k 262 (275)
T PRK09120 241 EQANSLDPEGGREEGLKQFL-DD 262 (275)
T ss_pred HHHHhhCCHHHHHHHHHHHH-hc
Confidence 44567888 8999999999 44
No 44
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.8e-52 Score=404.11 Aligned_cols=260 Identities=22% Similarity=0.304 Sum_probs=221.4
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc----
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ---- 139 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~---- 139 (435)
+++.|.++..+++|++|+||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.....
T Consensus 7 ~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g-~~FcaG~Dl~~~~~~~~~~~~ 85 (276)
T PRK05864 7 TMSLVLVDHPRPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAG-RGFSSGADHKSAGVVPHVEGL 85 (276)
T ss_pred CCCceEEeeecCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCeecCcchhhhhcccccccc
Confidence 4667888754689999999999999999999999999999999999999999999997 89999999998743210
Q ss_pred --hhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCC-ChhHHHHHhhC
Q 013851 140 --LSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFP-DVGFSYIAAKG 216 (435)
Q Consensus 140 --~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P-~~g~~~~l~r~ 216 (435)
............+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~ 165 (276)
T PRK05864 86 TRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRA 165 (276)
T ss_pred cchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhh
Confidence 111112233445677788999999999999999999999999999999999999999999999997 78999999999
Q ss_pred CCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhh
Q 013851 217 PGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLP 296 (435)
Q Consensus 217 ~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 296 (435)
+|.. ++++|++||++++ |+||+++|||+++||++++.+.+.
T Consensus 166 vG~~-~A~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------- 206 (276)
T PRK05864 166 IGSS-RAFEIMLTGRDVD-AEEAERIGLVSRQVPDEQLLDTCY------------------------------------- 206 (276)
T ss_pred hCHH-HHHHHHHcCCccC-HHHHHHcCCcceeeCHHHHHHHHH-------------------------------------
Confidence 9998 9999999999999 999999999999999887764332
Q ss_pred HHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCC-CHHHHHHH
Q 013851 297 QITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELS-KLSGVMKY 375 (435)
Q Consensus 297 ~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~-~l~~~l~~ 375 (435)
+||+ +|+..||.+++.+|++++... .. ++.+.+..
T Consensus 207 -------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~ 242 (276)
T PRK05864 207 -------------------------------AIAA----RMAGFSRPGIELTKRTLWSGL---------DAASLEAHMQA 242 (276)
T ss_pred -------------------------------HHHH----HHHhCCHHHHHHHHHHHHhhc---------ccCCHHHHHHH
Confidence 3443 689999999999999998764 33 68888888
Q ss_pred HHHHH-HHhCCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 376 EYRVA-LRSSLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 376 E~~~~-~~~~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
|.... ...+.++|++||+++|+ +| |+|+|++.
T Consensus 243 e~~~~~~~~~~~~d~~e~~~af~-~k-r~p~~~~~ 275 (276)
T PRK05864 243 EGLGQLFVRLLTANFEEAVAARA-EK-RPPVFTDD 275 (276)
T ss_pred HHHHHHHHhccChhHHHHHHHHh-cc-CCCCCCCC
Confidence 86532 23578999999999999 78 79999764
No 45
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-52 Score=404.07 Aligned_cols=259 Identities=26% Similarity=0.395 Sum_probs=225.1
Q ss_pred cccccEEEEEecC-cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchh
Q 013851 63 GAEEFVKGNVHPN-GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLS 141 (435)
Q Consensus 63 ~~~~~i~~~~~~~-~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~ 141 (435)
+.|+.|.+++ ++ +|++|+||||+++|+||.+|+++|.++|+.++.|+++++|||+|.| ++||+|+|++++......+
T Consensus 2 ~~~~~i~~~~-~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~~ 79 (272)
T PRK06210 2 MAYDAVLYEV-ADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAG-RGFCAGADMGELQTIDPSD 79 (272)
T ss_pred CCcceEEEEE-CCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCC-CCcccccCHHHHhccCccc
Confidence 3467788886 67 8999999999999999999999999999999999999999999998 8999999999875422110
Q ss_pred H-----HHHHH----HHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHH
Q 013851 142 E-----MIEVF----TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYI 212 (435)
Q Consensus 142 ~-----~~~~~----~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~ 212 (435)
. ...+. ...++++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~ 159 (272)
T PRK06210 80 GRRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWI 159 (272)
T ss_pred ccccccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhh
Confidence 0 00111 12244567889999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhh
Q 013851 213 AAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLK 292 (435)
Q Consensus 213 l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 292 (435)
|++++|.. ++++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 160 l~~~ig~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------- 204 (272)
T PRK06210 160 LPRLVGHA-NALDLLLSARTFY-AEEALRLGLVNRVVPPDELMERTL--------------------------------- 204 (272)
T ss_pred hHhhhCHH-HHHHHHHcCCccC-HHHHHHcCCcceecCHHHHHHHHH---------------------------------
Confidence 99999998 9999999999999 999999999999999877654322
Q ss_pred hhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhhhcCCCCccCCCHHH
Q 013851 293 LLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLTQKYFSKVASAHGKTDNELSKLSG 371 (435)
Q Consensus 293 ~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~-sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~ 371 (435)
+||+ +|+++ ||.+++.+|++++... ..++.+
T Consensus 205 -----------------------------------~~a~----~i~~~~~p~a~~~~K~~l~~~~---------~~~l~~ 236 (272)
T PRK06210 205 -----------------------------------AYAE----DLARNVSPASMAVIKRQLYEDA---------FQTLAE 236 (272)
T ss_pred -----------------------------------HHHH----HHHhcCCHHHHHHHHHHHHhcc---------cCCHHH
Confidence 3443 68875 9999999999999875 567999
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 372 VMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 372 ~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
.++.|...+...+.++|++||+++|+ +| |+|.|..
T Consensus 237 ~~~~e~~~~~~~~~~~~~~egi~af~-~k-r~p~~~~ 271 (272)
T PRK06210 237 ATARANREMHESLQRPDFIEGVASFL-EK-RPPRFPG 271 (272)
T ss_pred HHHHHHHHHHHHhcCccHHHHHHHHh-cc-CCCCCCC
Confidence 99999999999999999999999999 78 7999974
No 46
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-51 Score=399.17 Aligned_cols=254 Identities=24% Similarity=0.375 Sum_probs=222.7
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh-chhH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN-QLSE 142 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~-~~~~ 142 (435)
.|+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.... ....
T Consensus 2 ~~~~i~~~~-~~~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~~~~ 78 (257)
T PRK06495 2 MMSQLKLEV-SDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAG-KVFCAGADLKGRPDVIKGPGD 78 (257)
T ss_pred CcceEEEEe-eCCEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCcccCcCHHhHhhccCCchh
Confidence 356688875 6899999999998 5999999999999999999999999999999997 8999999999875431 1122
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...+.....+++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |+++++++++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~-~ 154 (257)
T PRK06495 79 LRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHS-L 154 (257)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHH-H
Confidence 22333445567888999999999999999999999999999999999999999999999996 4567899999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|+++|+.++ |+||+++|||+++||++++.+.+.
T Consensus 155 a~~lll~g~~~~-a~eA~~~GLv~~vv~~~~~~~~a~------------------------------------------- 190 (257)
T PRK06495 155 TRRMMLTGYRVP-AAELYRRGVIEACLPPEELMPEAM------------------------------------------- 190 (257)
T ss_pred HHHHHHcCCeeC-HHHHHHcCCcceecCHHHHHHHHH-------------------------------------------
Confidence 999999999999 999999999999999887764333
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
+++ ++|+++||.+++.+|++++... ..++.++++.|...+..
T Consensus 191 -------------------------~~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~ 232 (257)
T PRK06495 191 -------------------------EIA----REIASKSPLATRLAKDALNTIE---------NMSLRDGYRYEQDITAK 232 (257)
T ss_pred -------------------------HHH----HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHH
Confidence 333 3699999999999999999876 56899999999999999
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
.+.++|++||+++|+ +| |+|.|+.
T Consensus 233 ~~~s~d~~egi~af~-~k-r~p~~~~ 256 (257)
T PRK06495 233 LAKTEDAKEAQRAFL-EK-RPPVFKG 256 (257)
T ss_pred HhcChHHHHHHHHHh-cc-CCCCCCC
Confidence 999999999999999 78 7999975
No 47
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=1.5e-51 Score=402.21 Aligned_cols=257 Identities=19% Similarity=0.260 Sum_probs=220.3
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc-hhH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ-LSE 142 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~-~~~ 142 (435)
+++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|++||+|||+|.|+++||+|+|++++..... ...
T Consensus 11 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~ 89 (273)
T PRK07396 11 EYEDILYKS-ADGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGGYVDDD 89 (273)
T ss_pred CCcceEEEe-cCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhcccccchh
Confidence 356688875 789999999999999999999999999999999999999999999998669999999998743210 111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
....+ ....++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 90 ~~~~~-~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~-~ 167 (273)
T PRK07396 90 GVPRL-NVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQK-K 167 (273)
T ss_pred hhhhh-HHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHH-H
Confidence 11111 123566788999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 168 a~~l~ltg~~~~-A~eA~~~GLv~~vv~~~~l~~~a~------------------------------------------- 203 (273)
T PRK07396 168 AREIWFLCRQYD-AQEALDMGLVNTVVPLADLEKETV------------------------------------------- 203 (273)
T ss_pred HHHHHHhCCCcC-HHHHHHcCCcCeecCHHHHHHHHH-------------------------------------------
Confidence 999999999999 999999999999999877764333
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
++| ++|+++||.+++.+|++++... . .+....+.|...+..
T Consensus 204 -------------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~-~~~~~~~~e~~~~~~ 244 (273)
T PRK07396 204 -------------------------RWC----REMLQNSPMALRCLKAALNADC---------D-GQAGLQELAGNATML 244 (273)
T ss_pred -------------------------HHH----HHHHhCCHHHHHHHHHHHHhhh---------c-cHHHHHHHHHHHHHH
Confidence 333 3699999999999999998764 2 355556678888888
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
.+.++|++|||.+|+ +| |+|+|+.
T Consensus 245 ~~~~~d~~egi~af~-~k-r~p~~~~ 268 (273)
T PRK07396 245 FYMTEEAQEGRNAFN-EK-RQPDFSK 268 (273)
T ss_pred HhcChhHHHHHHHHh-CC-CCCCCCC
Confidence 899999999999999 78 7999975
No 48
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-51 Score=398.60 Aligned_cols=254 Identities=25% Similarity=0.394 Sum_probs=227.1
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIE 145 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~ 145 (435)
+.+.++. +++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++....... ..
T Consensus 5 ~~i~~~~-~~~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~--~~ 80 (259)
T PRK06688 5 TDLLVEL-EDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAG-RAFSAGGDIKDFPKAPPKP--PD 80 (259)
T ss_pred CceEEEE-ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCccCccCHHHHhccCcch--HH
Confidence 4477775 689999999999999999999999999999999999999999999998 8999999999986533111 23
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHH
Q 013851 146 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 225 (435)
Q Consensus 146 ~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~ 225 (435)
+....++++..|..+|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. ++++
T Consensus 81 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~-~a~~ 159 (259)
T PRK06688 81 ELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRA-RAAE 159 (259)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHH-HHHH
Confidence 445556788899999999999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred HhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCc
Q 013851 226 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 305 (435)
Q Consensus 226 l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~ 305 (435)
|++||++++ |+||+++||||+++|++++.+.+.
T Consensus 160 l~l~g~~~~-a~eA~~~Glv~~v~~~~~l~~~a~---------------------------------------------- 192 (259)
T PRK06688 160 MLLLGEPLS-AEEALRIGLVNRVVPAAELDAEAD---------------------------------------------- 192 (259)
T ss_pred HHHhCCccC-HHHHHHcCCcceecCHHHHHHHHH----------------------------------------------
Confidence 999999999 999999999999999877654322
Q ss_pred ccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCC
Q 013851 306 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 385 (435)
Q Consensus 306 ~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~ 385 (435)
++| ++|++.||.+++.+|++++... ..++++++..|.+.+...+.
T Consensus 193 ----------------------~~a----~~i~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 237 (259)
T PRK06688 193 ----------------------AQA----AKLAAGPASALRYTKRAINAAT---------LTELEEALAREAAGFGRLLR 237 (259)
T ss_pred ----------------------HHH----HHHHhCCHHHHHHHHHHHHhhh---------hCCHHHHHHHHHHHHHHHhC
Confidence 333 3688999999999999999876 56799999999999999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCC
Q 013851 386 RSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 386 s~d~~egv~afl~~K~r~P~w~~ 408 (435)
++|+++|+++|+ +| ++|+|++
T Consensus 238 ~~~~~~~~~af~-~~-~~p~~~~ 258 (259)
T PRK06688 238 TPDFREGATAFI-EK-RKPDFTG 258 (259)
T ss_pred CHHHHHHHHHHH-cC-CCCCCCC
Confidence 999999999999 67 7999974
No 49
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.4e-51 Score=405.10 Aligned_cols=259 Identities=23% Similarity=0.333 Sum_probs=219.5
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh--c---
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN--Q--- 139 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~--~--- 139 (435)
++.|.++. +++|++|+||||++.|+||.+|+.+|.++|+.++.|+++|+|||+|.| ++||+|+|++++.... .
T Consensus 3 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~ 80 (296)
T PRK08260 3 YETIRYDV-ADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAG-RAFCAGADLSAGGNTFDLDAPR 80 (296)
T ss_pred cceEEEee-eCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CCeecCcChHHhhhcccccccc
Confidence 55688885 689999999999999999999999999999999999999999999998 8999999999874310 0
Q ss_pred ----------hhH-HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChh
Q 013851 140 ----------LSE-MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVG 208 (435)
Q Consensus 140 ----------~~~-~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g 208 (435)
... ...+......++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g 160 (296)
T PRK08260 81 TPVEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAA 160 (296)
T ss_pred cccccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcc
Confidence 001 112222334577889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCC
Q 013851 209 FSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGE 288 (435)
Q Consensus 209 ~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 288 (435)
++++|++++|.. ++++|++||++++ |+||+++|||+++||++++.+.+.
T Consensus 161 ~~~~l~r~vG~~-~A~~llltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~----------------------------- 209 (296)
T PRK08260 161 SSWFLPRLVGLQ-TALEWVYSGRVFD-AQEALDGGLVRSVHPPDELLPAAR----------------------------- 209 (296)
T ss_pred hhhhHHHhhCHH-HHHHHHHcCCccC-HHHHHHCCCceeecCHHHHHHHHH-----------------------------
Confidence 999999999998 9999999999999 999999999999999877654322
Q ss_pred chhhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhhhcCCCCccCC
Q 013851 289 APLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLTQKYFSKVASAHGKTDNELS 367 (435)
Q Consensus 289 ~~~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~-sp~al~~tk~~l~~~~~~~~~~~~~~~ 367 (435)
+++ ++|+++ ||.+++.+|++++.... ...
T Consensus 210 ---------------------------------------~~a----~~i~~~~~~~a~~~~K~~l~~~~~-------~~~ 239 (296)
T PRK08260 210 ---------------------------------------ALA----REIADNTSPVSVALTRQMMWRMAG-------ADH 239 (296)
T ss_pred ---------------------------------------HHH----HHHHhcCChHHHHHHHHHHHhccc-------CCC
Confidence 333 368875 99999999999987631 012
Q ss_pred CHHHHHHHHHHHHHHhCCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 368 KLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 368 ~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
.+. ....|...+...+.++|++||+.+|+ +| |+|.|+++
T Consensus 240 ~~~-~~~~e~~~~~~~~~~~d~~egi~af~-~k-r~p~f~~~ 278 (296)
T PRK08260 240 PME-AHRVDSRAIYSRGRSGDGKEGVSSFL-EK-RPAVFPGK 278 (296)
T ss_pred cHH-HHHHHHHHHHHHccChhHHHHHHHHh-cC-CCCCCCCC
Confidence 333 34568888888889999999999999 77 79999986
No 50
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=4.6e-51 Score=397.00 Aligned_cols=256 Identities=20% Similarity=0.268 Sum_probs=221.8
Q ss_pred cccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhH
Q 013851 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSE 142 (435)
Q Consensus 63 ~~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~ 142 (435)
.+.+.|.++..+++|++||||||++.|++|.+|+.+|.++|+.++.|+++|+|||+|.| ++||+|+|++++...... .
T Consensus 6 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~-~ 83 (265)
T PLN02888 6 VSENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSG-RAFCSGVDLTAAEEVFKG-D 83 (265)
T ss_pred CCCCeEEEEeccCCEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CcccCCCCHHHHHhhccc-h
Confidence 45677888754689999999999999999999999999999999999999999999998 899999999986532211 1
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
. .....+++..|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. +
T Consensus 84 ~---~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~ 159 (265)
T PLN02888 84 V---KDVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGAN-R 159 (265)
T ss_pred h---hHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHH-H
Confidence 1 11123466678999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 160 a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 195 (265)
T PLN02888 160 AREVSLTAMPLT-AETAERWGLVNHVVEESELLKKAR------------------------------------------- 195 (265)
T ss_pred HHHHHHhCCccC-HHHHHHcCCccEeeChHHHHHHHH-------------------------------------------
Confidence 999999999999 999999999999999877654332
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
++| ++|++.+|.+++.+|++++... ..++.+.+..|...+..
T Consensus 196 -------------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~ 237 (265)
T PLN02888 196 -------------------------EVA----EAIIKNNQGMVLRYKSVINDGL---------KLDLGHALQLEKERAHD 237 (265)
T ss_pred -------------------------HHH----HHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHH
Confidence 333 3799999999999999999876 56799999999887777
Q ss_pred hC--CCchHHHHHHHHHhcCCCCCCCCC
Q 013851 383 SS--LRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 383 ~~--~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
.+ .++|++||+++|+ +| |+|+-.+
T Consensus 238 ~~~~~~~d~~e~~~af~-ek-r~~~~~~ 263 (265)
T PLN02888 238 YYNGMTKEQFQKMQEFI-AG-RSSKKPS 263 (265)
T ss_pred HhccCCHHHHHHHHHHH-hc-CCCCCCC
Confidence 64 5999999999999 77 6776444
No 51
>PLN02921 naphthoate synthase
Probab=100.00 E-value=1.2e-50 Score=403.43 Aligned_cols=258 Identities=19% Similarity=0.247 Sum_probs=219.0
Q ss_pred ccccEEEEEe-cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh-chh
Q 013851 64 AEEFVKGNVH-PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN-QLS 141 (435)
Q Consensus 64 ~~~~i~~~~~-~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~-~~~ 141 (435)
.++.|.++.. +++|++|+||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++.... ...
T Consensus 63 ~~~~i~~~~~~~~~Va~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~~~~~ 142 (327)
T PLN02921 63 EFTDIIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGYVGP 142 (327)
T ss_pred CCceEEEEEecCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhcccccch
Confidence 5777888853 58999999999999999999999999999999999999999999999867999999999874321 001
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchH
Q 013851 142 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 221 (435)
Q Consensus 142 ~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 221 (435)
.....+ ...+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 143 ~~~~~~-~~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~~- 220 (327)
T PLN02921 143 DDAGRL-NVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQK- 220 (327)
T ss_pred hHHHHH-HHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCHH-
Confidence 101111 123467788999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhh
Q 013851 222 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 301 (435)
Q Consensus 222 ~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 301 (435)
++++|+++|+.++ |+||+++|||+++||.+++.+.+.
T Consensus 221 ~A~ellltG~~~~-A~eA~~~GLV~~vv~~~~l~~~a~------------------------------------------ 257 (327)
T PLN02921 221 KAREMWFLARFYT-ASEALKMGLVNTVVPLDELEGETV------------------------------------------ 257 (327)
T ss_pred HHHHHHHcCCcCC-HHHHHHCCCceEEeCHHHHHHHHH------------------------------------------
Confidence 9999999999999 999999999999999887765332
Q ss_pred cCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHH
Q 013851 302 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 381 (435)
Q Consensus 302 F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~ 381 (435)
+||+ +|+++||.+++.+|++++... . ........|...+.
T Consensus 258 --------------------------~~a~----~la~~~p~al~~~K~~l~~~~---------~-~~~~~~~~~~~~~~ 297 (327)
T PLN02921 258 --------------------------KWCR----EILRNSPTAIRVLKSALNAAD---------D-GHAGLQELGGNATL 297 (327)
T ss_pred --------------------------HHHH----HHHccCHHHHHHHHHHHHHhh---------c-chhHHHHHHHHHHH
Confidence 3443 699999999999999998765 2 23333344457777
Q ss_pred HhCCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 382 RSSLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 382 ~~~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
..+.++|++||+++|+ +| |+|.|+.
T Consensus 298 ~~~~s~d~~egi~Af~-ek-r~p~f~~ 322 (327)
T PLN02921 298 LFYGSEEGNEGRTAYL-EG-RAPDFSK 322 (327)
T ss_pred HHhcCHHHHHHHHHHh-cc-CCCCCCC
Confidence 7889999999999999 78 7999975
No 52
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=1.3e-50 Score=392.38 Aligned_cols=253 Identities=31% Similarity=0.456 Sum_probs=222.4
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHH
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMI 144 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~ 144 (435)
+..+.++. .++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..........
T Consensus 4 ~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g-~~FsaG~Dl~~~~~~~~~~~~~ 81 (257)
T COG1024 4 YETILVER-EDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAG-KAFSAGADLKELLSPEDGNAAE 81 (257)
T ss_pred CCeeEEEe-eCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CceecccCHHHHhcccchhHHH
Confidence 45577775 466999999999999999999999999999999999999999999998 9999999999987511111222
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 145 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 145 ~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
.++...+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++|++|.. .++
T Consensus 82 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~-~a~ 160 (257)
T COG1024 82 NLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRG-RAK 160 (257)
T ss_pred HHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHH-HHH
Confidence 5666677899999999999999999999999999999999999999999999999999999889999999999998 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCC-CChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 303 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 303 (435)
+|++||+.++ |+||+++|||+++|+. +++.+.+.+
T Consensus 161 ~l~ltg~~~~-a~eA~~~Glv~~vv~~~~~l~~~a~~------------------------------------------- 196 (257)
T COG1024 161 ELLLTGEPIS-AAEALELGLVDEVVPDAEELLERALE------------------------------------------- 196 (257)
T ss_pred HHHHcCCcCC-HHHHHHcCCcCeeeCCHHHHHHHHHH-------------------------------------------
Confidence 9999999999 9999999999999985 466543333
Q ss_pred CcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHh
Q 013851 304 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 383 (435)
Q Consensus 304 ~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~ 383 (435)
+++ +++. +|.+++.+|+.++... ...+.+.+..|...+...
T Consensus 197 -------------------------~a~----~~a~-~~~a~~~~k~~~~~~~---------~~~l~~~~~~~~~~~~~~ 237 (257)
T COG1024 197 -------------------------LAR----RLAA-PPLALAATKRLVRAAL---------EADLAEALEAEALAFARL 237 (257)
T ss_pred -------------------------HHH----HHcc-CHHHHHHHHHHHHHhh---------hccHHHHHHHHHHHHHHH
Confidence 333 4555 9999999999999886 344999999999999988
Q ss_pred CCCchHHHHHHHHHhcCCCCCCC
Q 013851 384 SLRSDFAEGVRAVLVDKDQNPKW 406 (435)
Q Consensus 384 ~~s~d~~egv~afl~~K~r~P~w 406 (435)
+.++|++||+++|+ + |+|.|
T Consensus 238 ~~~~d~~eg~~a~~-~--r~p~~ 257 (257)
T COG1024 238 FSSEDFREGVRAFL-E--RKPVF 257 (257)
T ss_pred hcChhHHHHHHHHH-c--cCCCC
Confidence 89999999999999 4 78988
No 53
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-50 Score=392.83 Aligned_cols=254 Identities=22% Similarity=0.299 Sum_probs=221.0
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhch--hH
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQL--SE 142 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~--~~ 142 (435)
++.+.++. +++|++||||||++.|++|.+|+++|.++++.++.|+++|+|||+|.| ++||+|+|++++...... ..
T Consensus 2 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~ 79 (262)
T PRK07509 2 MDRVSVTI-EDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEG-GAFCAGLDVKSVASSPGNAVKL 79 (262)
T ss_pred CceEEEEe-eCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCC-CCcCCCcCHHHHhcccchhhhh
Confidence 45688885 799999999999999999999999999999999999999999999997 899999999987643211 11
Q ss_pred HHHH----HHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCC
Q 013851 143 MIEV----FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 218 (435)
Q Consensus 143 ~~~~----~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G 218 (435)
.... .....+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g 159 (262)
T PRK07509 80 LFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVR 159 (262)
T ss_pred HhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhC
Confidence 1111 122344666788999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHH
Q 013851 219 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 298 (435)
Q Consensus 219 ~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 298 (435)
.. ++++|++||++++ |+||+++||||++|+. +.+.+
T Consensus 160 ~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~--~~~~a---------------------------------------- 195 (262)
T PRK07509 160 KD-VARELTYTARVFS-AEEALELGLVTHVSDD--PLAAA---------------------------------------- 195 (262)
T ss_pred HH-HHHHHHHcCCCcC-HHHHHHcCChhhhhch--HHHHH----------------------------------------
Confidence 98 9999999999999 9999999999999953 32211
Q ss_pred HhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHH
Q 013851 299 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR 378 (435)
Q Consensus 299 ~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~ 378 (435)
.++|+ +|+++||.+++.+|++++... ..++.+.+..|.+
T Consensus 196 ----------------------------~~~a~----~l~~~~~~~~~~~K~~l~~~~---------~~~~~~~~~~e~~ 234 (262)
T PRK07509 196 ----------------------------LALAR----EIAQRSPDAIAAAKRLINRSW---------TASVRALLARESV 234 (262)
T ss_pred ----------------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHH
Confidence 13443 789999999999999999876 5679999999999
Q ss_pred HHHHhCCCchHHHHHHHHHhcCCCCCCCC
Q 013851 379 VALRSSLRSDFAEGVRAVLVDKDQNPKWN 407 (435)
Q Consensus 379 ~~~~~~~s~d~~egv~afl~~K~r~P~w~ 407 (435)
.+...+.++|++||+++|+ +| |+|.|+
T Consensus 235 ~~~~~~~~~d~~e~~~af~-ek-r~p~~~ 261 (262)
T PRK07509 235 EQIRLLLGKNQKIAVKAQM-KK-RAPKFL 261 (262)
T ss_pred HHHHHhcChhHHHHHHHHh-cC-CCCCCC
Confidence 9999999999999999999 78 799996
No 54
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-50 Score=392.06 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=220.8
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhch---hH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQL---SE 142 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~---~~ 142 (435)
+.+.++. +++|++|+||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++...... ..
T Consensus 2 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 79 (255)
T PRK07260 2 EHIIYEV-EDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANG-KVFSVGGDLVEMKRAVDEDDVQS 79 (255)
T ss_pred CceEEEE-ECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcccccCHHHHHhhccccchhh
Confidence 4577775 689999999999999999999999999999999999999999999998 899999999998642211 12
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...+....++++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +
T Consensus 80 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~ 158 (255)
T PRK07260 80 LVKIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLN-R 158 (255)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHH-H
Confidence 222334456677899999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||++++ |+||+++|||+++||++++.+.+.++
T Consensus 159 a~~l~l~g~~~s-a~eA~~~Glv~~vv~~~~l~~~a~~~----------------------------------------- 196 (255)
T PRK07260 159 ATHLAMTGEALT-AEKALEYGFVYRVAESEKLEKTCEQL----------------------------------------- 196 (255)
T ss_pred HHHHHHhCCccC-HHHHHHcCCcceecCHhHHHHHHHHH-----------------------------------------
Confidence 999999999999 99999999999999988776433332
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
+ ++|++.+|.+++.+|+.++... ..++++.+..|...+..
T Consensus 197 ---------------------------a----~~la~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~ 236 (255)
T PRK07260 197 ---------------------------L----KKLRRGSSNSYAAIKSLVWESF---------FKGWEDYAKLELALQES 236 (255)
T ss_pred ---------------------------H----HHHHcCCHHHHHHHHHHHHHHh---------hcCHHHHHHHHHHHHHH
Confidence 3 3699999999999999999876 56799999999999999
Q ss_pred hCCCchHHHHHHHHHhcC
Q 013851 383 SSLRSDFAEGVRAVLVDK 400 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K 400 (435)
.+.++|++||+++|+ +|
T Consensus 237 ~~~~~~~~e~~~af~-~k 253 (255)
T PRK07260 237 LAFKEDFKEGVRAFS-ER 253 (255)
T ss_pred HhcCHHHHHHHHHHH-hc
Confidence 999999999999999 66
No 55
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3e-50 Score=387.79 Aligned_cols=247 Identities=27% Similarity=0.414 Sum_probs=216.4
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHH
Q 013851 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVF 147 (435)
Q Consensus 68 i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~ 147 (435)
|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.... ...+.
T Consensus 2 i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~----~~~~~ 75 (248)
T PRK06072 2 IKVES-REGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEG-RAFCVGADLSEFAPDF----AIDLR 75 (248)
T ss_pred eEEEE-ECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCcccCcCHHHHhhhh----HHHHH
Confidence 45664 689999999999999999999999999999999999999999999998 8999999999875321 11233
Q ss_pred HHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHh
Q 013851 148 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 227 (435)
Q Consensus 148 ~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ 227 (435)
..++.++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++| . ++++++
T Consensus 76 ~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g-~-~a~~ll 153 (248)
T PRK06072 76 ETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTG-Q-RFYEIL 153 (248)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhh-H-HHHHHH
Confidence 34456777899999999999999999999999999999999999999999999999999999999999999 4 799999
Q ss_pred hcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCccc
Q 013851 228 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKS 307 (435)
Q Consensus 228 ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s 307 (435)
+||++++ |+||+++|||+++ +++.+.+
T Consensus 154 l~g~~~~-a~eA~~~Glv~~~---~~~~~~a------------------------------------------------- 180 (248)
T PRK06072 154 VLGGEFT-AEEAERWGLLKIS---EDPLSDA------------------------------------------------- 180 (248)
T ss_pred HhCCccC-HHHHHHCCCcccc---chHHHHH-------------------------------------------------
Confidence 9999999 9999999999953 2333211
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCCc
Q 013851 308 VRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRS 387 (435)
Q Consensus 308 ~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~ 387 (435)
.++| ++|++.||.+++.+|++++... ..++++.++.|...+..++.++
T Consensus 181 -------------------~~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~~~ 228 (248)
T PRK06072 181 -------------------EEMA----NRISNGPFQSYIAAKRMINLVL---------YNDLEEFLEYESAIQGYLGKTE 228 (248)
T ss_pred -------------------HHHH----HHHHhCCHHHHHHHHHHHHHHh---------hcCHHHHHHHHHHHHHHHhCCh
Confidence 1334 4789999999999999999876 4679999999999999999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCCC
Q 013851 388 DFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 388 d~~egv~afl~~K~r~P~w~~~ 409 (435)
|++||+++|+ +| |+|.|+++
T Consensus 229 d~~eg~~af~-~k-r~p~~~~~ 248 (248)
T PRK06072 229 DFKEGISSFK-EK-REPKFKGI 248 (248)
T ss_pred hHHHHHHHHh-cC-CCCCCCCC
Confidence 9999999999 78 79999864
No 56
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-50 Score=389.58 Aligned_cols=246 Identities=18% Similarity=0.274 Sum_probs=213.0
Q ss_pred EEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHH
Q 013851 69 KGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFT 148 (435)
Q Consensus 69 ~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~ 148 (435)
.+..++++|++||||||++ |+||.+|+.+|.++++.++.|++||+|||+|.| ++||+|+|++++..............
T Consensus 4 ~~~~~~~~v~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G-~~F~aG~Dl~~~~~~~~~~~~~~~~~ 81 (249)
T PRK07938 4 TSTTPEPGIAEVTVDYPPV-NALPSAGWFALADAITAAGADPDTRVVVLRAEG-RGFNAGVDIKELQATPGFTALIDANR 81 (249)
T ss_pred eecccCCCEEEEEECCCCc-ccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCC-CceecCcCHHHHhhccchhHHHHHHH
Confidence 3343578999999999985 999999999999999999999999999999998 89999999998754221122222233
Q ss_pred HHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhh
Q 013851 149 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 228 (435)
Q Consensus 149 ~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~l 228 (435)
....++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++ |++++|++++|.. ++++|++
T Consensus 82 ~~~~~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~-~a~~l~l 157 (249)
T PRK07938 82 GCFAAFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQH-LMRALFF 157 (249)
T ss_pred HHHHHHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHH-HHHHHHH
Confidence 44567788999999999999999999999999999999999999999999999986 5677899999998 9999999
Q ss_pred cCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcccH
Q 013851 229 TGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSV 308 (435)
Q Consensus 229 tG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~ 308 (435)
||++++ |+||+++|||+++||++++++.+.
T Consensus 158 tg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------------- 187 (249)
T PRK07938 158 TAATIT-AAELHHFGSVEEVVPRDQLDEAAL------------------------------------------------- 187 (249)
T ss_pred hCCcCC-HHHHHHCCCccEEeCHHHHHHHHH-------------------------------------------------
Confidence 999999 999999999999999877764333
Q ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCCch
Q 013851 309 RQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSD 388 (435)
Q Consensus 309 ~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d 388 (435)
+|| ++|+.+||.+++.+|++++... ..++.+.++.|.......+.++|
T Consensus 188 -------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~~~d 235 (249)
T PRK07938 188 -------------------EVA----RKIAAKDTRVIRAAKEALNGID---------PQDVERSYRWEQGFTFELNLAGV 235 (249)
T ss_pred -------------------HHH----HHHHhCCHHHHHHHHHHHHhhc---------cCCHHHHHHHHHHHHHHHhcCcc
Confidence 333 3689999999999999999875 56789999999999999999999
Q ss_pred HHHHHHHHHhcCCCCC
Q 013851 389 FAEGVRAVLVDKDQNP 404 (435)
Q Consensus 389 ~~egv~afl~~K~r~P 404 (435)
++||+++|+ +| |+|
T Consensus 236 ~~eg~~af~-ek-r~p 249 (249)
T PRK07938 236 SDEHRDAFV-EK-RKA 249 (249)
T ss_pred HHHHHHHHH-hc-CCC
Confidence 999999999 77 566
No 57
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=3.5e-50 Score=387.85 Aligned_cols=248 Identities=20% Similarity=0.259 Sum_probs=212.6
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHH
Q 013851 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVF 147 (435)
Q Consensus 68 i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~ 147 (435)
|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++... ....++
T Consensus 3 v~~~~-~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g-~~FcaG~Dl~~~~~~----~~~~~~ 75 (251)
T TIGR03189 3 VWLER-DGKLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEG-PHFSFGASVAEHMPD----QCAAML 75 (251)
T ss_pred EEEEe-eCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCC-CceecCcChhhhCch----hHHHHH
Confidence 55664 6889999999997 5999999999999999999999999999999998 799999999986321 112233
Q ss_pred HHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHh
Q 013851 148 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 227 (435)
Q Consensus 148 ~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ 227 (435)
....+++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|+ |++++|++++|.. ++++|+
T Consensus 76 ~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~-~~~~~l~~~vg~~-~a~~l~ 153 (251)
T TIGR03189 76 ASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAP-AASCLLPERMGRV-AAEDLL 153 (251)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCC-chHHHHHHHhCHH-HHHHHH
Confidence 44456788899999999999999999999999999999999999999999999999987 4678999999998 999999
Q ss_pred hcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCccc
Q 013851 228 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKS 307 (435)
Q Consensus 228 ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s 307 (435)
+||++++ |+||+++|||++++|+.+ + +++
T Consensus 154 ltg~~~~-a~eA~~~Glv~~v~~~~~--~--~a~---------------------------------------------- 182 (251)
T TIGR03189 154 YSGRSID-GAEGARIGLANAVAEDPE--N--AAL---------------------------------------------- 182 (251)
T ss_pred HcCCCCC-HHHHHHCCCcceecCcHH--H--HHH----------------------------------------------
Confidence 9999999 999999999999997532 1 111
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHH-HHHHHHHHhCCC
Q 013851 308 VRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMK-YEYRVALRSSLR 386 (435)
Q Consensus 308 ~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~-~E~~~~~~~~~s 386 (435)
+++ +++|+++||.+++.+|++++... ..++++.+. .|...+...+.+
T Consensus 183 --------------------~~~---a~~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~e~~~~~~~~~s 230 (251)
T TIGR03189 183 --------------------AWF---DEHPAKLSASSLRFAVRAARLGM---------NERVKAKIAEVEALYLEELMAT 230 (251)
T ss_pred --------------------HHH---HHHHHhCCHHHHHHHHHHHHhhh---------cccHHHHHHHHHHHHHHHHhCC
Confidence 221 13689999999999999999875 566777764 787888889999
Q ss_pred chHHHHHHHHHhcCCCCCCCCCC
Q 013851 387 SDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 387 ~d~~egv~afl~~K~r~P~w~~~ 409 (435)
+|++||+++|+ +| |+|.|+++
T Consensus 231 ~d~~eg~~af~-ek-r~p~~~~~ 251 (251)
T TIGR03189 231 HDAVEGLNAFL-EK-RPALWEDR 251 (251)
T ss_pred HhHHHHHHHHH-hc-CCCCCCCC
Confidence 99999999999 78 79999753
No 58
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-50 Score=391.02 Aligned_cols=249 Identities=18% Similarity=0.195 Sum_probs=213.3
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEV 146 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 146 (435)
.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.... .......
T Consensus 4 ~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g-~~FcaG~Dl~~~~~~~-~~~~~~~ 80 (254)
T PRK08259 4 SVRVER-NGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAG-GTFCAGADLKAVGTGR-GNRLHPS 80 (254)
T ss_pred eEEEEE-ECCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCccCCcChHHHhccc-chhhhhh
Confidence 377775 689999999999999999999999999999999999999999999997 8999999999875432 1111110
Q ss_pred HHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHH
Q 013851 147 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 226 (435)
Q Consensus 147 ~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l 226 (435)
....+...+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. ++++|
T Consensus 81 --~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~l 157 (254)
T PRK08259 81 --GDGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHS-RAMDL 157 (254)
T ss_pred --hcchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHH-HHHHH
Confidence 011112233479999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcc
Q 013851 227 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 306 (435)
Q Consensus 227 ~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~ 306 (435)
+++|+.++ |+||+++||||++||++++.+.+.
T Consensus 158 ll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 189 (254)
T PRK08259 158 ILTGRPVD-ADEALAIGLANRVVPKGQARAAAE----------------------------------------------- 189 (254)
T ss_pred HHcCCccC-HHHHHHcCCCCEeeChhHHHHHHH-----------------------------------------------
Confidence 99999999 999999999999999988765333
Q ss_pred cHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCC
Q 013851 307 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 386 (435)
Q Consensus 307 s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s 386 (435)
+|| ++|++.||.+++.+|++++... ..++.+.++.|...+...+.
T Consensus 190 ---------------------~~a----~~la~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~~~~- 234 (254)
T PRK08259 190 ---------------------ELA----AELAAFPQTCLRADRLSALEQW---------GLPEEAALANEFAHGLAVLA- 234 (254)
T ss_pred ---------------------HHH----HHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHHh-
Confidence 333 3699999999999999999865 56799999999988777776
Q ss_pred chHHHHHHHHHhcCCCCCC
Q 013851 387 SDFAEGVRAVLVDKDQNPK 405 (435)
Q Consensus 387 ~d~~egv~afl~~K~r~P~ 405 (435)
+|++||+++|+ +|+++|.
T Consensus 235 ~d~~egi~af~-~~~~~~~ 252 (254)
T PRK08259 235 AEALEGAARFA-AGAGRHG 252 (254)
T ss_pred hHHHHHHHHHH-hhhcccC
Confidence 99999999999 5546663
No 59
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-50 Score=389.01 Aligned_cols=244 Identities=22% Similarity=0.327 Sum_probs=216.2
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIE 145 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~ 145 (435)
+.+.++. +++|++|+||||+++|+||.+|+++|.++++.++.|+++|+|||+|.| ++||+|+|++++...... ....
T Consensus 3 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~-~~~~ 79 (249)
T PRK05870 3 DPVLLDV-DDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAG-KAFCAGADLTALGAAPGR-PAED 79 (249)
T ss_pred ccEEEEc-cCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCeecCcChHHHhccccc-chHH
Confidence 3467774 689999999999999999999999999999999999999999999998 899999999998653211 1123
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHH
Q 013851 146 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 225 (435)
Q Consensus 146 ~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~ 225 (435)
.+...++++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++++
T Consensus 80 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~-~a~~ 158 (249)
T PRK05870 80 GLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQ-VARA 158 (249)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHH-HHHH
Confidence 344455677789999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCc
Q 013851 226 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 305 (435)
Q Consensus 226 l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~ 305 (435)
|++||++++ |+||+++||||++| +++.+.+.
T Consensus 159 l~ltg~~~~-a~eA~~~Glv~~vv--~~l~~~a~---------------------------------------------- 189 (249)
T PRK05870 159 ALLFGMRFD-AEAAVRHGLALMVA--DDPVAAAL---------------------------------------------- 189 (249)
T ss_pred HHHhCCccC-HHHHHHcCCHHHHH--hhHHHHHH----------------------------------------------
Confidence 999999999 99999999999999 45553222
Q ss_pred ccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccC-CCHHHHHHHHHHHHHHhC
Q 013851 306 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNEL-SKLSGVMKYEYRVALRSS 384 (435)
Q Consensus 306 ~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~-~~l~~~l~~E~~~~~~~~ 384 (435)
++| ++|+++||.+++.+|+.++... . .++++.++.|...+...+
T Consensus 190 ----------------------~~a----~~la~~~~~a~~~~K~~~~~~~---------~~~~l~~~~~~e~~~~~~~~ 234 (249)
T PRK05870 190 ----------------------ELA----AGPAAAPRELVLATKASMRATA---------SLAQHAAAVEFELGPQAASV 234 (249)
T ss_pred ----------------------HHH----HHHHhCCHHHHHHHHHHHHhcc---------ccCCHHHHHHHHHHHHHHHh
Confidence 333 3799999999999999999865 4 679999999999999999
Q ss_pred CCchHHHHHHHHH
Q 013851 385 LRSDFAEGVRAVL 397 (435)
Q Consensus 385 ~s~d~~egv~afl 397 (435)
.++|++||+++|+
T Consensus 235 ~~~d~~eg~~af~ 247 (249)
T PRK05870 235 QSPEFAARLAAAQ 247 (249)
T ss_pred cChhHHHHHHHHh
Confidence 9999999999998
No 60
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4e-50 Score=387.64 Aligned_cols=243 Identities=20% Similarity=0.255 Sum_probs=213.8
Q ss_pred cEEEEEecC---cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHH
Q 013851 67 FVKGNVHPN---GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEM 143 (435)
Q Consensus 67 ~i~~~~~~~---~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~ 143 (435)
.|.++. ++ +|++||||||++.|+||.+|+++|.++++.+++|+++|+|||+|.| ++||+|+|++++...... .
T Consensus 4 ~i~~~~-~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~--~ 79 (251)
T PRK06023 4 HILVER-PGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTE-GCFSAGNDMQDFLAAAMG--G 79 (251)
T ss_pred eEEEEe-ecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCeecCcCHHHHhhcccc--c
Confidence 477775 44 5999999999999999999999999999999999999999999997 899999999987542211 1
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 223 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a 223 (435)
..+.....+++..|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. ++
T Consensus 80 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~-~a 158 (251)
T PRK06023 80 TSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQ-RA 158 (251)
T ss_pred hhhHHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHH-HH
Confidence 12233345677889999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcC
Q 013851 224 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 303 (435)
Q Consensus 224 ~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 303 (435)
+++++||+.++ |+||+++|||+++||.+++.+.+.
T Consensus 159 ~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 193 (251)
T PRK06023 159 FALLALGEGFS-AEAAQEAGLIWKIVDEEAVEAETL-------------------------------------------- 193 (251)
T ss_pred HHHHHhCCCCC-HHHHHHcCCcceeeCHHHHHHHHH--------------------------------------------
Confidence 99999999999 999999999999999877764332
Q ss_pred CcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHh
Q 013851 304 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 383 (435)
Q Consensus 304 ~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~ 383 (435)
++| ++|++.||.+++.+|++++... ..+.+.++.|...+...
T Consensus 194 ------------------------~~a----~~l~~~~~~a~~~~K~~l~~~~----------~~l~~~~~~e~~~~~~~ 235 (251)
T PRK06023 194 ------------------------KAA----EELAAKPPQALQIARDLMRGPR----------EDILARIDEEAKHFAAR 235 (251)
T ss_pred ------------------------HHH----HHHHhCCHHHHHHHHHHHHhch----------hhHHHHHHHHHHHHHHH
Confidence 333 3699999999999999998653 35888899999988899
Q ss_pred CCCchHHHHHHHHH
Q 013851 384 SLRSDFAEGVRAVL 397 (435)
Q Consensus 384 ~~s~d~~egv~afl 397 (435)
+.++|++||+++|+
T Consensus 236 ~~~~~~~e~~~af~ 249 (251)
T PRK06023 236 LKSAEARAAFEAFM 249 (251)
T ss_pred hCCHHHHHHHHHHh
Confidence 99999999999999
No 61
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3e-50 Score=397.19 Aligned_cols=258 Identities=18% Similarity=0.160 Sum_probs=215.7
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhh----h-
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQ----N- 138 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~----~- 138 (435)
.++.+.++. +++|++||||||+++|+||.+|+.+|.++|+.++.|++||+|||||.| ++||+|+|+++.... .
T Consensus 3 ~~~~v~~~~-~~~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G-~~FcaG~Dl~~~~~~~~~~~~ 80 (298)
T PRK12478 3 DFQTLLYTT-AGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAG-RAFSGGYDFGGGFQHWGEAMM 80 (298)
T ss_pred CceEEEEec-cCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcccCcCccccccccchhcc
Confidence 356688875 789999999999999999999999999999999999999999999998 899999999862110 0
Q ss_pred -ch--hHHHHH---HHH---HHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccC-CCCCChh
Q 013851 139 -QL--SEMIEV---FTA---EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGI-GLFPDVG 208 (435)
Q Consensus 139 -~~--~~~~~~---~~~---~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~-Gl~P~~g 208 (435)
.. +....+ ... ....+..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++ |++| |
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~ 158 (298)
T PRK12478 81 TDGRWDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--T 158 (298)
T ss_pred cccccCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--h
Confidence 00 001111 011 1235667889999999999999999999999999999999999999999997 8875 3
Q ss_pred HHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCC
Q 013851 209 FSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGE 288 (435)
Q Consensus 209 ~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 288 (435)
+++ + +++|.. ++++|++||++|+ |+||+++|||+++||++++++.+.
T Consensus 159 ~~~-~-~~vG~~-~A~~llltg~~i~-A~eA~~~GLV~~vv~~~~l~~~a~----------------------------- 205 (298)
T PRK12478 159 GMW-L-YRLSLA-KVKWHSLTGRPLT-GVQAAEAELINEAVPFERLEARVA----------------------------- 205 (298)
T ss_pred hHH-H-HHhhHH-HHHHHHHcCCccC-HHHHHHcCCcceecCHHHHHHHHH-----------------------------
Confidence 333 2 458998 9999999999999 999999999999999888775433
Q ss_pred chhhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCC
Q 013851 289 APLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSK 368 (435)
Q Consensus 289 ~~~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~ 368 (435)
+||+ +|+.+||.+++.+|++++... ...+
T Consensus 206 ---------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~--------~~~~ 234 (298)
T PRK12478 206 ---------------------------------------EVAT----ELARIPLSQLQAQKLIVNQAY--------ENMG 234 (298)
T ss_pred ---------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHHH--------Hhcc
Confidence 3343 689999999999999999876 1246
Q ss_pred HHHHHHHHHHHHHHhCCCchHH--------HHHHHHHhcCCCCCCCCCCCc
Q 013851 369 LSGVMKYEYRVALRSSLRSDFA--------EGVRAVLVDKDQNPKWNPASL 411 (435)
Q Consensus 369 l~~~l~~E~~~~~~~~~s~d~~--------egv~afl~~K~r~P~w~~~~~ 411 (435)
+.+.++.|...+...+.++|++ ||++||+ +| |+|+|+.-+-
T Consensus 235 l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~egv~Af~-ek-R~p~f~~~~~ 283 (298)
T PRK12478 235 LASTQTLGGILDGLMRNTPDALEFIRTAETQGVRAAV-ER-RDGPFGDYSQ 283 (298)
T ss_pred hhHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHH-Hh-cCCcccccCc
Confidence 9999999999999999999997 5999999 78 7999987665
No 62
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.6e-50 Score=384.72 Aligned_cols=241 Identities=19% Similarity=0.286 Sum_probs=212.7
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHH
Q 013851 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVF 147 (435)
Q Consensus 68 i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~ 147 (435)
|.++. +++|++||||||+++|+||.+|+.+|.++++.++.| ++|+|||||.| ++||+|+|+++... ...+.
T Consensus 2 ~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g-~~F~aG~Dl~~~~~------~~~~~ 72 (243)
T PRK07854 2 IGVTR-DGQVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQG-TVFCAGADLSGDVY------ADDFP 72 (243)
T ss_pred ceEEE-eCCEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCC-CceecccCCccchh------HHHHH
Confidence 45664 689999999999999999999999999999999965 89999999998 89999999985311 11233
Q ss_pred HHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHh
Q 013851 148 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 227 (435)
Q Consensus 148 ~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ 227 (435)
....+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++|+
T Consensus 73 ~~~~~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~-~a~~l~ 151 (243)
T PRK07854 73 DALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGG-RARAML 151 (243)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHH-HHHHHH
Confidence 4445678889999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred hcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCccc
Q 013851 228 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKS 307 (435)
Q Consensus 228 ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s 307 (435)
+||++++ |+||+++|||++|++ +. .+
T Consensus 152 ltg~~~~-a~eA~~~Glv~~v~~---~~-~a------------------------------------------------- 177 (243)
T PRK07854 152 LGAEKLT-AEQALATGMANRIGT---LA-DA------------------------------------------------- 177 (243)
T ss_pred HcCCCcC-HHHHHHCCCcccccC---HH-HH-------------------------------------------------
Confidence 9999999 999999999999964 22 11
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCCc
Q 013851 308 VRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRS 387 (435)
Q Consensus 308 ~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~ 387 (435)
.+||+ +|+++||.+++.+|++++.. ..+++.++.|...+...+.++
T Consensus 178 -------------------~~~a~----~l~~~~~~a~~~~K~~l~~~-----------~~~~~~~~~e~~~~~~~~~~~ 223 (243)
T PRK07854 178 -------------------QAWAA----EIAGLAPLALQHAKRVLNDD-----------GAIEEAWPAHKELFDKAWASQ 223 (243)
T ss_pred -------------------HHHHH----HHHhCCHHHHHHHHHHHHcc-----------CCHHHHHHHHHHHHHHHhcCc
Confidence 24454 78999999999999999853 358899999999999999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCC
Q 013851 388 DFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 388 d~~egv~afl~~K~r~P~w~~ 408 (435)
|++||+++|+ +| |+|.|++
T Consensus 224 d~~eg~~af~-~k-r~p~~~~ 242 (243)
T PRK07854 224 DAIEAQVARI-EK-RPPKFQG 242 (243)
T ss_pred hHHHHHHHHh-CC-CCCCCCC
Confidence 9999999999 77 7999975
No 63
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-49 Score=385.89 Aligned_cols=253 Identities=23% Similarity=0.356 Sum_probs=220.7
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh-chhH-
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN-QLSE- 142 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~-~~~~- 142 (435)
+..+.++. +++|++|+||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.... ....
T Consensus 5 ~~~i~~~~-~~~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~ 82 (260)
T PRK07827 5 DTLVRYAV-DGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTG-GTFCAGADLSEAGGGGGDPYDA 82 (260)
T ss_pred CcceEEEe-eCCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCcChHHHhhcccCchhH
Confidence 44577775 689999999999999999999999999999999999999999999997 8999999999875431 1111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...++..+.+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++| . +
T Consensus 83 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~-~-~ 160 (260)
T PRK07827 83 AVARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSP-R-A 160 (260)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhH-H-H
Confidence 2234455567888999999999999999999999999999999999999999999999999999999999999754 5 8
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|+++|++++ |+||+++|||+++++ ++.+.
T Consensus 161 a~~l~l~g~~~~-a~eA~~~Glv~~v~~--~l~~~--------------------------------------------- 192 (260)
T PRK07827 161 AARYYLTGEKFG-AAEAARIGLVTAAAD--DVDAA--------------------------------------------- 192 (260)
T ss_pred HHHHHHhCCccC-HHHHHHcCCcccchH--HHHHH---------------------------------------------
Confidence 999999999999 999999999999974 34432
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
+.+.+++|++.||.+++.+|+++++.. ...+.+.++.|...+..
T Consensus 193 ---------------------------a~~~a~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~~~~~~~~ 236 (260)
T PRK07827 193 ---------------------------VAALLADLRRGSPQGLAESKALTTAAV---------LAGFDRDAEELTEESAR 236 (260)
T ss_pred ---------------------------HHHHHHHHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHH
Confidence 223334799999999999999999876 56799999999999999
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWN 407 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~ 407 (435)
.+.++|++||+++|+ +| |+|+|+
T Consensus 237 ~~~~~~~~~~~~af~-~k-r~p~~~ 259 (260)
T PRK07827 237 LFVSDEAREGMTAFL-QK-RPPRWA 259 (260)
T ss_pred HhcChhHHHHHHHHh-cC-CCCCCC
Confidence 999999999999999 77 789996
No 64
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=9.1e-50 Score=390.21 Aligned_cols=252 Identities=18% Similarity=0.247 Sum_probs=218.4
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CccccCCCchhhhhhhc-hh
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGP-RAFCAGGDVKEISTQNQ-LS 141 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~-~~F~aG~Dl~~~~~~~~-~~ 141 (435)
+.+.|.++..+++|++||||||+ .|+||.+|+.+|.++++.+++|+++|+|||||.|+ ++||+|+|++++..... .+
T Consensus 9 ~~~~i~~~~~~~~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~~~~~~ 87 (278)
T PLN03214 9 ATPGVRVDRRPGGIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAPKTSAA 87 (278)
T ss_pred CCCceEEEEcCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhccccchH
Confidence 45678887535899999999986 69999999999999999999999999999999873 69999999998753211 11
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCC-CCChhHHHHHhhCCCch
Q 013851 142 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGL-FPDVGFSYIAAKGPGGG 220 (435)
Q Consensus 142 ~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl-~P~~g~~~~l~r~~G~~ 220 (435)
....+......++.+|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|+ +|++|++++|++++|.+
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~~ 167 (278)
T PLN03214 88 RYAEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRK 167 (278)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCHH
Confidence 12233333345777899999999999999999999999999999999999999999999999 59999999999999998
Q ss_pred HHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHh
Q 013851 221 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 300 (435)
Q Consensus 221 ~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 300 (435)
++++|++||+.|+ |+||+++||||++||.+++.+.+.
T Consensus 168 -~a~~llltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------- 204 (278)
T PLN03214 168 -VAESLLLRGRLVR-PAEAKQLGLIDEVVPAAALMEAAA----------------------------------------- 204 (278)
T ss_pred -HHHHHHHcCCccC-HHHHHHcCCCcEecChHHHHHHHH-----------------------------------------
Confidence 9999999999999 999999999999999877654322
Q ss_pred hcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHH
Q 013851 301 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 380 (435)
Q Consensus 301 ~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~ 380 (435)
+++ ++|++.||.+++.+|+++++.. ..+++++++.|.+.+
T Consensus 205 ---------------------------~~a----~~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~ 244 (278)
T PLN03214 205 ---------------------------SAM----ERALKLPSAARAATKALLREEF---------SAAWEAYYEEEAKGG 244 (278)
T ss_pred ---------------------------HHH----HHHHcCCHHHHHHHHHHHHhhH---------HHHHHHHHHHHHHHH
Confidence 333 3699999999999999999876 457899999999999
Q ss_pred HHhCCCchHHHHHHHHHhcC
Q 013851 381 LRSSLRSDFAEGVRAVLVDK 400 (435)
Q Consensus 381 ~~~~~s~d~~egv~afl~~K 400 (435)
...+.++|++||+++|+ +|
T Consensus 245 ~~~~~s~d~~egi~afl-ek 263 (278)
T PLN03214 245 WKMLSEPSIIKALGGVM-ER 263 (278)
T ss_pred HHHhCCHHHHHHHHHHH-HH
Confidence 99999999999999999 54
No 65
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=6e-50 Score=384.99 Aligned_cols=244 Identities=32% Similarity=0.487 Sum_probs=223.8
Q ss_pred EEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHH
Q 013851 70 GNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTA 149 (435)
Q Consensus 70 ~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 149 (435)
|+. +|+|++|+||||++.|++|.+|+.+|.++|+.++.|+++++||++|.| ++||+|+|++++... ..+....+...
T Consensus 2 ~~~-~~~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~-~~F~~G~Dl~~~~~~-~~~~~~~~~~~ 78 (245)
T PF00378_consen 2 YEI-EDGVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGG-KAFCAGADLKEFLNS-DEEEAREFFRR 78 (245)
T ss_dssp EEE-ETTEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEEST-SESBESB-HHHHHHH-HHHHHHHHHHH
T ss_pred EEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecc-cccccccchhhhhcc-ccccccccchh
Confidence 564 699999999999999999999999999999999999999999999986 899999999999877 34555667778
Q ss_pred HHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhc
Q 013851 150 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 229 (435)
Q Consensus 150 ~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~lt 229 (435)
.+.++.++..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.+ .++++++|
T Consensus 79 ~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-~a~~l~l~ 157 (245)
T PF00378_consen 79 FQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPS-RARELLLT 157 (245)
T ss_dssp HHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHH-HHHHHHHH
T ss_pred hccccccchhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeecc-cccccccc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999998 99999999
Q ss_pred CCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCcccHH
Q 013851 230 GKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVR 309 (435)
Q Consensus 230 G~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~ 309 (435)
|++++ |+||+++||||+++|++++.+.+..
T Consensus 158 g~~~~-a~eA~~~Glv~~v~~~~~l~~~a~~------------------------------------------------- 187 (245)
T PF00378_consen 158 GEPIS-AEEALELGLVDEVVPDEELDEEALE------------------------------------------------- 187 (245)
T ss_dssp TCEEE-HHHHHHTTSSSEEESGGGHHHHHHH-------------------------------------------------
T ss_pred cccch-hHHHHhhcceeEEcCchhhhHHHHH-------------------------------------------------
Confidence 99999 9999999999999999887643333
Q ss_pred HHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCCchH
Q 013851 310 QIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDF 389 (435)
Q Consensus 310 ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~ 389 (435)
.+++|+..+|.+++.+|+.+++.. ...+.+.++.|...+...+.++|+
T Consensus 188 -----------------------~a~~l~~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
T PF00378_consen 188 -----------------------LAKRLAAKPPSALRATKKALNRAL---------EQSLEEALEFEQDLFAECFKSEDF 235 (245)
T ss_dssp -----------------------HHHHHHTSCHHHHHHHHHHHHHHH---------HSHHHHHHHHHHHHHHHHHTSHHH
T ss_pred -----------------------HHHHHhcCCHHHHHHHHHHHHHHH---------HhhHHHHHHHHHHHHHHHcCCHHH
Confidence 334799999999999999999976 567999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 013851 390 AEGVRAVLVDK 400 (435)
Q Consensus 390 ~egv~afl~~K 400 (435)
+||+++|+ ||
T Consensus 236 ~e~~~~f~-eK 245 (245)
T PF00378_consen 236 QEGIAAFL-EK 245 (245)
T ss_dssp HHHHHHHH-TT
T ss_pred HHHHHHHh-Cc
Confidence 99999999 66
No 66
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=3.7e-49 Score=390.25 Aligned_cols=259 Identities=21% Similarity=0.273 Sum_probs=217.1
Q ss_pred cccEEEEEe-cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC------CccccCCCchhhhhh
Q 013851 65 EEFVKGNVH-PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGP------RAFCAGGDVKEISTQ 137 (435)
Q Consensus 65 ~~~i~~~~~-~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~------~~F~aG~Dl~~~~~~ 137 (435)
+..|.++.. +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+ ++||+|+|++++...
T Consensus 22 ~~~i~~~~~~~~~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~ 101 (302)
T PRK08321 22 FTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRD 101 (302)
T ss_pred ceeEEEEEecCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccc
Confidence 445777741 5889999999999999999999999999999999999999999999873 699999999976321
Q ss_pred h------ch-h--HHHHHHH-HHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEc-CCceEecccccCCCCCC
Q 013851 138 N------QL-S--EMIEVFT-AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT-EKTLLAMPENGIGLFPD 206 (435)
Q Consensus 138 ~------~~-~--~~~~~~~-~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~-e~a~f~~pe~~~Gl~P~ 206 (435)
. .. . ....... ....+...+..+||||||+|||+|+|||++|+++||||||+ ++++|++||+++|++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~ 181 (302)
T PRK08321 102 GYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDG 181 (302)
T ss_pred cccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCC
Confidence 0 00 0 0001111 12245667889999999999999999999999999999999 69999999999999999
Q ss_pred hhHHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCC
Q 013851 207 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE 286 (435)
Q Consensus 207 ~g~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 286 (435)
+|++++|+|++|.. ++++|++||+.++ |+||+++|||+++||++++.+.+.+
T Consensus 182 ~~~~~~L~r~vG~~-~A~~l~ltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~~-------------------------- 233 (302)
T PRK08321 182 GYGSAYLARQVGQK-FAREIFFLGRTYS-AEEAHDMGAVNAVVPHAELETEALE-------------------------- 233 (302)
T ss_pred chHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHCCCceEeeCHHHHHHHHHH--------------------------
Confidence 99999999999998 9999999999999 9999999999999998877653333
Q ss_pred CCchhhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccC
Q 013851 287 GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNEL 366 (435)
Q Consensus 287 ~~~~~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~ 366 (435)
+| ++|+++||.+++.+|++++... .
T Consensus 234 ------------------------------------------~a----~~la~~~~~a~~~~K~~l~~~~---------~ 258 (302)
T PRK08321 234 ------------------------------------------WA----REINGKSPTAMRMLKYAFNLTD---------D 258 (302)
T ss_pred ------------------------------------------HH----HHHHhCCHHHHHHHHHHHHhhh---------c
Confidence 33 3699999999999999998764 2
Q ss_pred CCHHHHHHHHHHHHHHhCCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 367 SKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 367 ~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
.+.+....|...+...+.++|++||+.+|+ +| |+|.|+..
T Consensus 259 -~~~~~~~~e~~~~~~~~~~~d~~egi~af~-ek-r~p~~~~~ 298 (302)
T PRK08321 259 -GLVGQQLFAGEATRLAYMTDEAQEGRDAFL-EK-RDPDWSDF 298 (302)
T ss_pred -ccHHHHHHHHHHHHHHhcCHHHHHHHHHHh-cc-CCCCCCCC
Confidence 244445568888888999999999999999 77 79999763
No 67
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=5.5e-49 Score=380.51 Aligned_cols=251 Identities=16% Similarity=0.205 Sum_probs=215.7
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHH-
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEM- 143 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~- 143 (435)
|+.+.++. +++|++|+||||++.|++|.+|+.+|.++++.++. ++|+|||+|.| ++||+|+|++++.........
T Consensus 3 ~~~i~~~~-~~~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~--~vr~vVl~g~g-~~FsaG~Dl~~~~~~~~~~~~~ 78 (255)
T PRK07112 3 YQTIRVRQ-QGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCEH--AATIVVLEGLP-EVFCFGADFSAIAEKPDAGRAD 78 (255)
T ss_pred CceEEEEe-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhc--CceEEEEEcCC-CCcccCcCHHHHhhccccchhh
Confidence 56788885 78999999999999999999999999999999983 59999999997 899999999987543211111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 223 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a 223 (435)
........+++.+|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++| +.+|++++|.. ++
T Consensus 79 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~-~a 156 (255)
T PRK07112 79 LIDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQ-KA 156 (255)
T ss_pred hhhHHHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHH-HH
Confidence 11123345678889999999999999999999999999999999999999999999999999865 56799999998 99
Q ss_pred HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcC
Q 013851 224 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 303 (435)
Q Consensus 224 ~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 303 (435)
++|+++|++++ |+||+++||||++||+++.. +
T Consensus 157 ~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~~~--~--------------------------------------------- 188 (255)
T PRK07112 157 HYMTLMTQPVT-AQQAFSWGLVDAYGANSDTL--L--------------------------------------------- 188 (255)
T ss_pred HHHHHhCCccc-HHHHHHcCCCceecCcHHHH--H---------------------------------------------
Confidence 99999999999 99999999999999864421 1
Q ss_pred CcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHh
Q 013851 304 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 383 (435)
Q Consensus 304 ~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~ 383 (435)
.+++ ++|++.||.+++.+|++++... ..+.+.++.|.......
T Consensus 189 -----------------------~~~a----~~l~~~~p~a~~~~K~~~~~~~----------~~~~~~~~~e~~~~~~~ 231 (255)
T PRK07112 189 -----------------------RKHL----LRLRCLNKAAVARYKSYASTLD----------DTVAAARPAALAANIEM 231 (255)
T ss_pred -----------------------HHHH----HHHHhCCHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHHH
Confidence 1333 3799999999999999998643 35889999999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCCCC
Q 013851 384 SLRSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 384 ~~s~d~~egv~afl~~K~r~P~w~~ 408 (435)
+.++|++||+.+|+ +| |+|.|+.
T Consensus 232 ~~~~~~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK07112 232 FADPENLRKIARYV-ET-GKFPWEA 254 (255)
T ss_pred HcChHHHHHHHHHH-cC-CCCCCCC
Confidence 99999999999999 77 7999973
No 68
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=3.1e-48 Score=373.99 Aligned_cols=244 Identities=16% Similarity=0.210 Sum_probs=217.3
Q ss_pred cccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHH
Q 013851 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMI 144 (435)
Q Consensus 65 ~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~ 144 (435)
+..+.++. +++|++|+||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....... .
T Consensus 4 ~~~~~~~~-~~~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~--~ 79 (249)
T PRK07110 4 KVVELREV-EEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYP-NYFATGGTQEGLLSLQTGK--G 79 (249)
T ss_pred CceEEEEe-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCeeCCcChHHHhhccchh--h
Confidence 55677775 689999999999999999999999999999999999999999999998 8999999999875432111 1
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 145 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 145 ~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
.+ .. ..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 80 ~~-~~-~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~-~a~ 156 (249)
T PRK07110 80 TF-TE-ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLA-LGQ 156 (249)
T ss_pred hH-hh-HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHH-HHH
Confidence 12 22 4677889999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
+|++||++++ |+||+++|||+++||++++.+.+.+
T Consensus 157 ~llltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~-------------------------------------------- 191 (249)
T PRK07110 157 EMLLTARYYR-GAELKKRGVPFPVLPRAEVLEKALE-------------------------------------------- 191 (249)
T ss_pred HHHHcCCccC-HHHHHHcCCCeEEeChHHHHHHHHH--------------------------------------------
Confidence 9999999999 9999999999999998877643322
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhC
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 384 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~ 384 (435)
+| ++|+++||.+++.+|++++... ...+.+.++.|...+...+
T Consensus 192 ------------------------~a----~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~ 234 (249)
T PRK07110 192 ------------------------LA----RSLAEKPRHSLVLLKDHLVADR---------RRRLPEVIEQEVAMHEKTF 234 (249)
T ss_pred ------------------------HH----HHHHhCCHHHHHHHHHHHHHhh---------hccHHHHHHHHHHHHHHHh
Confidence 33 3699999999999999999876 5689999999999999999
Q ss_pred CCchHHHHHHHHH
Q 013851 385 LRSDFAEGVRAVL 397 (435)
Q Consensus 385 ~s~d~~egv~afl 397 (435)
.++|++|||+++-
T Consensus 235 ~~~~~~egi~~~~ 247 (249)
T PRK07110 235 HQPEVKRRIESLY 247 (249)
T ss_pred CCHhHHHHHHHhc
Confidence 9999999999864
No 69
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.7e-48 Score=373.18 Aligned_cols=246 Identities=24% Similarity=0.308 Sum_probs=213.4
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHH
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEM 143 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~ 143 (435)
+++.+.++. +++|++|+||||+++|+||.+|+.+|.++|+.++.|+++|+|||+|.| ++||+|+|++++..... . .
T Consensus 2 ~~~~v~~~~-~~~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~-~-~ 77 (258)
T PRK06190 2 TEPILLVET-HDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGAD-PAFCAGLDLKELGGDGS-A-Y 77 (258)
T ss_pred CCceEEEEe-eCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCccCCcCHHHHhcccc-h-h
Confidence 467788885 789999999999999999999999999999999999999999999997 89999999999864321 1 1
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHH
Q 013851 144 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 223 (435)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a 223 (435)
.. ......++..|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++
T Consensus 78 ~~-~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~-~a 155 (258)
T PRK06190 78 GA-QDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIG-RA 155 (258)
T ss_pred hH-HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHH-HH
Confidence 11 22345677889999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcC
Q 013851 224 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 303 (435)
Q Consensus 224 ~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 303 (435)
++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 156 ~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~-------------------------------------------- 190 (258)
T PRK06190 156 RRMSLTGDFLD-AADALRAGLVTEVVPHDELLPRAR-------------------------------------------- 190 (258)
T ss_pred HHHHHhCCccC-HHHHHHcCCCeEecCHhHHHHHHH--------------------------------------------
Confidence 99999999999 999999999999999887764332
Q ss_pred CcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHh
Q 013851 304 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 383 (435)
Q Consensus 304 ~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~ 383 (435)
+|+ ++|+++||.+++.+|++++... ..++.+.++.|...+...
T Consensus 191 ------------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~ 233 (258)
T PRK06190 191 ------------------------RLA----ASIAGNNPAAVRALKASYDDGA---------AAQTGDALALEAEAARAH 233 (258)
T ss_pred ------------------------HHH----HHHHcCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHH
Confidence 333 3689999999999999999876 577999999999999888
Q ss_pred CCC--chH-HHHHHHHH
Q 013851 384 SLR--SDF-AEGVRAVL 397 (435)
Q Consensus 384 ~~s--~d~-~egv~afl 397 (435)
+.+ +++ .+--.+|+
T Consensus 234 ~~s~~~~~~~~~~~~~~ 250 (258)
T PRK06190 234 NRSVSPDGIAARREAVM 250 (258)
T ss_pred HcCCChHHHHHHHHHHH
Confidence 876 343 44444454
No 70
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=1.8e-47 Score=402.35 Aligned_cols=261 Identities=11% Similarity=0.033 Sum_probs=223.9
Q ss_pred ccccEEEEEe-cCcEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHhc-CCCceEEEEEeCCCCccccC
Q 013851 64 AEEFVKGNVH-PNGVAVITLDRPKAL-------------NAMNLDMDIKYKSFLDEWES-DPRVKCVLIEGSGPRAFCAG 128 (435)
Q Consensus 64 ~~~~i~~~~~-~~~v~~Itlnrp~~~-------------Nal~~~m~~eL~~al~~~~~-d~~vr~vVl~g~g~~~F~aG 128 (435)
.|+.+.++.+ +++|++||||||+++ |+||.+|+.+|.++++.++. |++||+|||||.|+++||+|
T Consensus 258 ~~~~~~v~~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG 337 (550)
T PRK08184 258 RYRHVDVEIDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLA 337 (550)
T ss_pred eeEEEEEEEEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeC
Confidence 3556666653 578999999999988 68999999999999999986 79999999999873499999
Q ss_pred CCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEEC-Cccchhh-hhhhhcCCeEEEc-------CCceEecccc
Q 013851 129 GDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMD-GVTMGFG-IGISGHGRYRIVT-------EKTLLAMPEN 199 (435)
Q Consensus 129 ~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavn-G~a~GgG-~~LalacD~ria~-------e~a~f~~pe~ 199 (435)
+|++.+.. ...............++.+|..+||||||+|| |+|+||| ++|+++||+|||+ ++++|++||+
T Consensus 338 ~Dl~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~ 416 (550)
T PRK08184 338 ADATLLAH-KDHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSAL 416 (550)
T ss_pred CChhhhcc-cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccc
Confidence 99874321 11111122233344577889999999999997 9999999 9999999999999 9999999999
Q ss_pred cCCCCCChhHHHHHhhC-CCchHHHHHH--hhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHH
Q 013851 200 GIGLFPDVGFSYIAAKG-PGGGSVGAYL--GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 276 (435)
Q Consensus 200 ~~Gl~P~~g~~~~l~r~-~G~~~~a~~l--~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 276 (435)
++|++|++|++++|+|+ +|.+ +++++ ++||++|+ |+||+++|||+++||++++++.+.+
T Consensus 417 ~~Gl~p~~gg~~~L~r~~vG~~-~A~~~~l~~tg~~i~-A~eA~~~GLv~~vv~~~~l~~~a~~---------------- 478 (550)
T PRK08184 417 NFGLYPMVNGLSRLARRFYGEP-DPLAAVRAKIGQPLD-ADAAEELGLVTAAPDDIDWEDEVRI---------------- 478 (550)
T ss_pred cccCCCCCCcHHHhHHHhcChH-HHHHHHHHHhCCcCC-HHHHHHcCCcccccChHHHHHHHHH----------------
Confidence 99999999999999988 7998 99997 58999999 9999999999999999887654333
Q ss_pred HHHhhcCCCCCCchhhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHh
Q 013851 277 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 356 (435)
Q Consensus 277 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~ 356 (435)
+| ++|+++||.+++.+|++++...
T Consensus 479 ----------------------------------------------------~a----~~ia~~~p~a~~~~K~~l~~~~ 502 (550)
T PRK08184 479 ----------------------------------------------------AL----EERASLSPDALTGMEANLRFAG 502 (550)
T ss_pred ----------------------------------------------------HH----HHHHhCCHHHHHHHHHHHHhcC
Confidence 33 3699999999999999999886
Q ss_pred hhcCCCCccCCCHHHH-HHHHHHHHHHhCCCchHHH---HHHHHHhcCCCCCCCCCCC
Q 013851 357 SAHGKTDNELSKLSGV-MKYEYRVALRSSLRSDFAE---GVRAVLVDKDQNPKWNPAS 410 (435)
Q Consensus 357 ~~~~~~~~~~~~l~~~-l~~E~~~~~~~~~s~d~~e---gv~afl~~K~r~P~w~~~~ 410 (435)
..++++. +..|..++..++.++|.+| |+++|+ +| |+|+|+...
T Consensus 503 ---------~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~-ek-r~~~f~~~~ 549 (550)
T PRK08184 503 ---------PETMETRIFGRLTAWQNWIFQRPNAVGEKGALKVYG-TG-QKAQFDWNR 549 (550)
T ss_pred ---------CCCHHHHHHHHHHHHHHHHhcCCcccccchHHHHhc-cC-CCCCCCCCC
Confidence 6789999 9999999999999999999 999999 88 899998754
No 71
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=3.5e-47 Score=398.99 Aligned_cols=260 Identities=12% Similarity=0.037 Sum_probs=223.5
Q ss_pred ccccEEEEE-ecCcEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHh-cCCCceEEEEEeCCCCc-ccc
Q 013851 64 AEEFVKGNV-HPNGVAVITLDRPKAL-------------NAMNLDMDIKYKSFLDEWE-SDPRVKCVLIEGSGPRA-FCA 127 (435)
Q Consensus 64 ~~~~i~~~~-~~~~v~~Itlnrp~~~-------------Nal~~~m~~eL~~al~~~~-~d~~vr~vVl~g~g~~~-F~a 127 (435)
.|.+|.+.. ++++|++||||||+++ |+||.+|+.+|.+++..++ +|++||+|||||.| +. ||+
T Consensus 254 ~~~~~~v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G-~~~F~a 332 (546)
T TIGR03222 254 RYPTVDVAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQG-DAELVL 332 (546)
T ss_pred ceeeEEEEEeccCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCC-CCceec
Confidence 355655553 3688999999999999 9999999999999999998 56999999999998 66 999
Q ss_pred CCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE-CCccchhh-hhhhhcCCeEEE-------cCCceEeccc
Q 013851 128 GGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM-DGVTMGFG-IGISGHGRYRIV-------TEKTLLAMPE 198 (435)
Q Consensus 128 G~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav-nG~a~GgG-~~LalacD~ria-------~e~a~f~~pe 198 (435)
|+|++.+.. .+.......+....+++.+|..+|||+||+| ||+|+||| ++|+++||+||| +++++|++||
T Consensus 333 G~Dl~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e 411 (546)
T TIGR03222 333 AADALLEAH-KDHWFVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSE 411 (546)
T ss_pred CcCcccccc-ccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCc
Confidence 999984321 1111112233333457789999999999999 89999999 999999999999 8999999999
Q ss_pred ccCCCCCChhHHHHHhhCC-CchHHH--HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHH
Q 013851 199 NGIGLFPDVGFSYIAAKGP-GGGSVG--AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 275 (435)
Q Consensus 199 ~~~Gl~P~~g~~~~l~r~~-G~~~~a--~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 275 (435)
+++|++|++|++++|++++ |.+ ++ +++++||++|+ |+||+++|||++++|++++.+.+.
T Consensus 412 ~~lGl~p~~gg~~~L~~~v~G~~-~a~~~~~~ltg~~i~-A~eA~~~Glv~~vv~~~~l~~~a~---------------- 473 (546)
T TIGR03222 412 LNFGLYPMVNGLSRLATRFYAEP-APVAAVRDKIGQALD-AEEAERLGLVTAAPDDIDWEDEIR---------------- 473 (546)
T ss_pred cccccCCCcCcHHHHHHHhcCch-hHHHHHHHHhCCCCC-HHHHHHcCCcccccCchHHHHHHH----------------
Confidence 9999999999999999998 987 88 55999999999 999999999999999988765333
Q ss_pred HHHHhhcCCCCCCchhhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHH
Q 013851 276 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 355 (435)
Q Consensus 276 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~ 355 (435)
+|| ++|+++||.+++.+|++++..
T Consensus 474 ----------------------------------------------------~~a----~~la~~~p~a~~~~K~~l~~~ 497 (546)
T TIGR03222 474 ----------------------------------------------------IAL----EERASFSPDALTGLEANLRFA 497 (546)
T ss_pred ----------------------------------------------------HHH----HHHHhcCHHHHHHHHHHHhhc
Confidence 333 369999999999999999987
Q ss_pred hhhcCCCCccCCCHHHH-HHHHHHHHHHhCCCchHHH---HHHHHHhcCCCCCCCCCCC
Q 013851 356 ASAHGKTDNELSKLSGV-MKYEYRVALRSSLRSDFAE---GVRAVLVDKDQNPKWNPAS 410 (435)
Q Consensus 356 ~~~~~~~~~~~~~l~~~-l~~E~~~~~~~~~s~d~~e---gv~afl~~K~r~P~w~~~~ 410 (435)
. ..++++. +..|...+..++.++|.+| |+++|+ +| |+|+|+-..
T Consensus 498 ~---------~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~-ek-r~p~f~~~~ 545 (546)
T TIGR03222 498 G---------PETMETRIFGRLTAWQNWIFNRPNAVGENGALKVYG-SG-KKAQFDMER 545 (546)
T ss_pred C---------CcChhhhHHHHHHHHHHHHhcCCcccchhhHHHHHc-cC-CCCCCCccC
Confidence 6 6789999 9999999999999999999 999999 88 899998654
No 72
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-46 Score=339.70 Aligned_cols=262 Identities=21% Similarity=0.283 Sum_probs=235.0
Q ss_pred ccEEEEE---ecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhH
Q 013851 66 EFVKGNV---HPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSE 142 (435)
Q Consensus 66 ~~i~~~~---~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~ 142 (435)
..+.++. .+.||.+|-+|||.+.|+|+.-|+++|.++|+.+..|+.+|+|+|++.-++.||+|+||++-.... +.+
T Consensus 27 ~Ev~v~~L~g~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~Ms-~~E 105 (291)
T KOG1679|consen 27 NEVFVRRLTGKDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTMS-PSE 105 (291)
T ss_pred ceeeeeeccCCCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcCC-HHH
Confidence 4455543 356899999999999999999999999999999999999999999999899999999999987765 667
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHH
Q 013851 143 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 222 (435)
Q Consensus 143 ~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~ 222 (435)
...|......++..|.++|.|+||+|+|.|+|||++++++||+|+|+++++|+++|++++++|++||+++|+|++|.. .
T Consensus 106 v~~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~a-l 184 (291)
T KOG1679|consen 106 VTRFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGVA-L 184 (291)
T ss_pred HHHHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhHH-H
Confidence 788999999999999999999999999999999999999999999999999999999999999999999999999997 9
Q ss_pred HHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhc
Q 013851 223 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 302 (435)
Q Consensus 223 a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 302 (435)
+++|++||+.++ +.||...|||+++|...+-.+.+.
T Consensus 185 aKELIftarvl~-g~eA~~lGlVnhvv~qneegdaa~------------------------------------------- 220 (291)
T KOG1679|consen 185 AKELIFTARVLN-GAEAAKLGLVNHVVEQNEEGDAAY------------------------------------------- 220 (291)
T ss_pred HHhHhhhheecc-chhHHhcchHHHHHhcCccccHHH-------------------------------------------
Confidence 999999999999 899999999999998664332221
Q ss_pred CCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHH
Q 013851 303 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 382 (435)
Q Consensus 303 ~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~ 382 (435)
+-|.+.+++|.-+-|.+++++|.+++.+. ..++..++..|..-..+
T Consensus 221 -------------------------~kal~lA~eilp~gPiavr~aKlAIn~G~---------evdiasgl~iEe~CYaq 266 (291)
T KOG1679|consen 221 -------------------------QKALELAREILPQGPIAVRLAKLAINLGM---------EVDIASGLSIEEMCYAQ 266 (291)
T ss_pred -------------------------HHHHHHHHHhccCCchhhhHHHHHhccCc---------eecccccccHHHHHHHh
Confidence 22334445899999999999999999987 56788899999999999
Q ss_pred hCCCchHHHHHHHHHhcCCCCCCCCCC
Q 013851 383 SSLRSDFAEGVRAVLVDKDQNPKWNPA 409 (435)
Q Consensus 383 ~~~s~d~~egv~afl~~K~r~P~w~~~ 409 (435)
...++|-.||+.+|- +| |+|.|+++
T Consensus 267 ~i~t~drLeglaaf~-ek-r~p~y~G~ 291 (291)
T KOG1679|consen 267 IIPTKDRLEGLAAFK-EK-RKPEYKGE 291 (291)
T ss_pred cCcHHHHHHHHHHHH-hh-cCCCcCCC
Confidence 999999999999999 78 89998863
No 73
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=8.9e-46 Score=350.82 Aligned_cols=188 Identities=21% Similarity=0.294 Sum_probs=166.4
Q ss_pred cccEEEEEe----cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhch
Q 013851 65 EEFVKGNVH----PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQL 140 (435)
Q Consensus 65 ~~~i~~~~~----~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~ 140 (435)
+++|.++.. +++|++|+||||++ |+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... .
T Consensus 2 ~~~~~~~~~~~~~~~~i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~-~ 78 (222)
T PRK05869 2 NEFVNVVVSDGSQDAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGH-EIFSAGDDMPELRTLS-A 78 (222)
T ss_pred ccchhhhcccCcccCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcCcCcCHHHHhccC-h
Confidence 355555542 58899999999986 999999999999999999999999999999987 8999999999976532 1
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCch
Q 013851 141 SEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 220 (435)
Q Consensus 141 ~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 220 (435)
...........+++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|..
T Consensus 79 ~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~ 158 (222)
T PRK05869 79 QEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPS 158 (222)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCHH
Confidence 22222334445788899999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHH
Q 013851 221 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSL 257 (435)
Q Consensus 221 ~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~ 257 (435)
+++++++||++++ |+||+++|||++++|++++.+.
T Consensus 159 -~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~ 193 (222)
T PRK05869 159 -RAKELVFSGRFFD-AEEALALGLIDEMVAPDDVYDA 193 (222)
T ss_pred -HHHHHHHcCCCcC-HHHHHHCCCCCEeeCchHHHHH
Confidence 9999999999999 9999999999999998877643
No 74
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5e-45 Score=358.47 Aligned_cols=239 Identities=20% Similarity=0.299 Sum_probs=202.4
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhc----
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQ---- 139 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~---- 139 (435)
+++.+.++. +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....
T Consensus 2 ~~~~v~~~~-~~~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G-~~FcaG~Dl~~~~~~~~~~~~ 79 (288)
T PRK08290 2 EYEYVRYEV-AGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAG-KHFSAGHDLGSGTPGRDRDPG 79 (288)
T ss_pred CCceEEEEe-eCCEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CccccCCCccccccccccccc
Confidence 467788885 789999999999999999999999999999999999999999999998 89999999998632110
Q ss_pred --------------h---hHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCC
Q 013851 140 --------------L---SEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIG 202 (435)
Q Consensus 140 --------------~---~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~G 202 (435)
. .........+..++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lG 159 (288)
T PRK08290 80 PDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMG 159 (288)
T ss_pred cccccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccC
Confidence 0 00111122344567788999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhc
Q 013851 203 LFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYS 282 (435)
Q Consensus 203 l~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 282 (435)
+ |+ ++++++++++|.. ++++|++||+.|+ |+||+++|||+++||++++.+.+.
T Consensus 160 l-~~-~~~~~l~~~iG~~-~A~~llltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~----------------------- 212 (288)
T PRK08290 160 I-PG-VEYFAHPWELGPR-KAKELLFTGDRLT-ADEAHRLGMVNRVVPRDELEAETL----------------------- 212 (288)
T ss_pred c-Cc-chHHHHHHHhhHH-HHHHHHHcCCCCC-HHHHHHCCCccEeeCHHHHHHHHH-----------------------
Confidence 8 44 4567789999998 9999999999999 999999999999999877764332
Q ss_pred CCCCCCchhhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCC
Q 013851 283 SDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKT 362 (435)
Q Consensus 283 ~~~~~~~~~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~ 362 (435)
+++ ++|+++||.+++.+|++++...
T Consensus 213 ---------------------------------------------~~a----~~la~~~~~a~~~~K~~~~~~~------ 237 (288)
T PRK08290 213 ---------------------------------------------ELA----RRIAAMPPFGLRLTKRAVNQTL------ 237 (288)
T ss_pred ---------------------------------------------HHH----HHHHhCCHHHHHHHHHHHHHHH------
Confidence 333 3699999999999999999876
Q ss_pred CccCCCHHHHHHHHHHHHHHhC-CCch
Q 013851 363 DNELSKLSGVMKYEYRVALRSS-LRSD 388 (435)
Q Consensus 363 ~~~~~~l~~~l~~E~~~~~~~~-~s~d 388 (435)
...++++++..|.......+ ++++
T Consensus 238 --~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (288)
T PRK08290 238 --DAQGFRAALDAVFDLHQLGHAHNAE 262 (288)
T ss_pred --hhccHHHHHHHHHHHHHHccccchh
Confidence 13469999999999998877 5665
No 75
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=1e-44 Score=395.07 Aligned_cols=287 Identities=20% Similarity=0.240 Sum_probs=226.4
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh--chhHHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN--QLSEMI 144 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~--~~~~~~ 144 (435)
.+.++..+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... ......
T Consensus 7 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~~~~~~ 85 (715)
T PRK11730 7 TLQVDWLEDGIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAK-DAFIVGADITEFLSLFAAPEEELS 85 (715)
T ss_pred eEEEEEcCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCC-CccccCcCHHHHhhhccCCHHHHH
Confidence 4666644689999999999999999999999999999999999999999999998 8999999999876421 112233
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 145 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 145 ~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
.+.....+++.+|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.. +++
T Consensus 86 ~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~-~A~ 164 (715)
T PRK11730 86 QWLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGAD-NAL 164 (715)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHH-HHH
Confidence 4455556778899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
+|++||++++ |+||+++||||++||++++.+.+.++++........ .......+..+... ..+.++|.
T Consensus 165 ~llltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~--------~~~~~~~~~~p~a~--~~~~~~~~- 232 (715)
T PRK11730 165 EWIAAGKDVR-AEDALKVGAVDAVVAPEKLQEAALALLKQAIAGKLD--------WKARRQPKLEPLKL--SKIEAMMS- 232 (715)
T ss_pred HHHHcCCcCC-HHHHHHCCCCeEecCHHHHHHHHHHHHHHHhhcCCc--------cccccCcccccccc--cchhHHHH-
Confidence 9999999999 999999999999999999888777776541111000 00000000000000 00222221
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHH-HHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHh
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEAL-QGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 383 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l-~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~ 383 (435)
...+++.+ ++..+..|..+ .++++++.+. ..+++++++.|.+.+..+
T Consensus 233 ----------------------~~~~k~~~~~~~~~~~pa~~-~~~~~i~~~~---------~~~~~~~l~~E~~~~~~~ 280 (715)
T PRK11730 233 ----------------------FTTAKGMVAQKAGKHYPAPM-TAVKTIEAAA---------GLGRDEALELEAKGFVKL 280 (715)
T ss_pred ----------------------HHHHHHHHHHhhccCCccHH-HHHHHHHHHh---------cCCHHHHHHHHHHHHHHH
Confidence 12333222 34556677666 7777888876 568999999999999999
Q ss_pred CCCchHHHHHHHHHhc
Q 013851 384 SLRSDFAEGVRAVLVD 399 (435)
Q Consensus 384 ~~s~d~~egv~afl~~ 399 (435)
+.++|++||+++|+.+
T Consensus 281 ~~s~d~~egi~aF~~~ 296 (715)
T PRK11730 281 AKTNVARALVGIFLND 296 (715)
T ss_pred hCCHHHHHHHHHHHHH
Confidence 9999999999999954
No 76
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=7.2e-44 Score=348.90 Aligned_cols=250 Identities=14% Similarity=0.103 Sum_probs=202.3
Q ss_pred cccccEEEEE-ecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEEeCCCCccccCCCchhhhh
Q 013851 63 GAEEFVKGNV-HPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWES-----DPRVKCVLIEGSGPRAFCAGGDVKEIST 136 (435)
Q Consensus 63 ~~~~~i~~~~-~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~-----d~~vr~vVl~g~g~~~F~aG~Dl~~~~~ 136 (435)
..+.++++.. .+++|++|+|| |++.|+||.+|+.+|.+++++++. |+++|+|||+|.++++||+|+|++++..
T Consensus 12 ~~~~~~~i~~e~~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~ 90 (287)
T PRK08788 12 GELSQLRVYYEEERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAE 90 (287)
T ss_pred cccCceEEEEEccCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhh
Confidence 3456666554 36789999996 999999999999999999999998 8999999999995489999999998753
Q ss_pred hh---chhHHHHHHHHHHHHHHHHh---hCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHH
Q 013851 137 QN---QLSEMIEVFTAEYSLICKIS---EYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 210 (435)
Q Consensus 137 ~~---~~~~~~~~~~~~~~l~~~i~---~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~ 210 (435)
.. ..+....+....+..+.++. .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~ 170 (287)
T PRK08788 91 LIRAGDRDALLAYARACVDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAY 170 (287)
T ss_pred hccccchHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHH
Confidence 21 11111122222333344343 7999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCch
Q 013851 211 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAP 290 (435)
Q Consensus 211 ~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 290 (435)
+++++++|.. ++++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 171 ~~l~~~vG~~-~A~ellltG~~l~-A~eA~~~GLV~~vv~~~el~~~a~------------------------------- 217 (287)
T PRK08788 171 SFLARRVGPK-LAEELILSGKLYT-AEELHDMGLVDVLVEDGQGEAAVR------------------------------- 217 (287)
T ss_pred HHHHHHhhHH-HHHHHHHcCCCCC-HHHHHHCCCCcEecCchHHHHHHH-------------------------------
Confidence 9999999998 9999999999999 999999999999999888764333
Q ss_pred hhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHH
Q 013851 291 LKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLS 370 (435)
Q Consensus 291 ~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~ 370 (435)
+|++ +|+++ |.+....|+.++... ..++.
T Consensus 218 -------------------------------------~~a~----~ia~~-~~~~~a~k~~~~~~~---------~~~~~ 246 (287)
T PRK08788 218 -------------------------------------TFIR----KSKRK-LNGWRAMLRARRRVN---------PLSLE 246 (287)
T ss_pred -------------------------------------HHHH----HHhcC-ccHHHHHHHHHHhhc---------cCCHH
Confidence 3333 57776 777777777777655 45789
Q ss_pred HHHHHHHHHHHHhCC-CchHHHHHHHHH
Q 013851 371 GVMKYEYRVALRSSL-RSDFAEGVRAVL 397 (435)
Q Consensus 371 ~~l~~E~~~~~~~~~-s~d~~egv~afl 397 (435)
+.++.|......++. .+.-++-|..|.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (287)
T PRK08788 247 ELMDITEIWVDAALQLEEKDLRTMERLV 274 (287)
T ss_pred HHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 999998877776554 445577788887
No 77
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-45 Score=334.80 Aligned_cols=260 Identities=21% Similarity=0.329 Sum_probs=225.8
Q ss_pred ccccEEEEE--ecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh---
Q 013851 64 AEEFVKGNV--HPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN--- 138 (435)
Q Consensus 64 ~~~~i~~~~--~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~--- 138 (435)
+++.+.+.+ .++.|.++.||||.|+|+||..|+.|+.++++.+..||+||+|||+|+| +.||+|+|+..+....
T Consensus 17 s~ksl~v~vk~~~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~G-KhFcaGIDl~~~~~~~~~~ 95 (292)
T KOG1681|consen 17 SYKSLEVSVKSAQPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAG-KHFCAGIDLNDMASDRILQ 95 (292)
T ss_pred ccceeeeeecCCCCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCC-cceecccCcchhhhhhccc
Confidence 466555553 3467999999999999999999999999999999999999999999998 9999999988765542
Q ss_pred --------chhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHH
Q 013851 139 --------QLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 210 (435)
Q Consensus 139 --------~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~ 210 (435)
....+.+....+++.+..|.+||||||++|||+|+|||+.|..+||+|+|+++|.|+.-|+.+|+..+.|..
T Consensus 96 ~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL 175 (292)
T KOG1681|consen 96 PEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTL 175 (292)
T ss_pred cccchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhH
Confidence 112334466667788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCC-hHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCc
Q 013851 211 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN-LGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEA 289 (435)
Q Consensus 211 ~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~-l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 289 (435)
.+||+.+|..+.++++.+|++.|. |.||++.|||++|+|+.+ +...+
T Consensus 176 ~RlpkvVGn~s~~~elafTar~f~-a~EAl~~GLvSrvf~dk~~ll~~~------------------------------- 223 (292)
T KOG1681|consen 176 NRLPKVVGNQSLARELAFTARKFS-ADEALDSGLVSRVFPDKEELLNGA------------------------------- 223 (292)
T ss_pred hhhhHHhcchHHHHHHHhhhhhcc-hhhhhhcCcchhhcCCHHHHHhhh-------------------------------
Confidence 999999997679999999999999 999999999999998743 22111
Q ss_pred hhhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCH
Q 013851 290 PLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKL 369 (435)
Q Consensus 290 ~~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l 369 (435)
...| +.|+.+||.+++.||+.|.+++ +.+.
T Consensus 224 -------------------------------------l~mA----~~Ia~KSpvaVqgTK~~L~ysr---------ehsv 253 (292)
T KOG1681|consen 224 -------------------------------------LPMA----ELIASKSPVAVQGTKENLLYSR---------EHSV 253 (292)
T ss_pred -------------------------------------HHHH----HHhccCCceeeechHHHHHHHh---------hhhh
Confidence 1333 3799999999999999999998 7889
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHhcCCCCCCCC
Q 013851 370 SGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWN 407 (435)
Q Consensus 370 ~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~ 407 (435)
++.|.+-..+....+.+.|+.+.+.|-+ +|.+++.|.
T Consensus 254 ~~sLnyvatwNms~L~s~Dl~~av~a~m-~k~k~~tfs 290 (292)
T KOG1681|consen 254 EESLNYVATWNMSMLLSDDLVKAVMAQM-EKLKTVTFS 290 (292)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCCCcc
Confidence 9999999999999999999999999999 563333354
No 78
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=1.1e-43 Score=386.97 Aligned_cols=285 Identities=19% Similarity=0.229 Sum_probs=223.9
Q ss_pred EEEEEecCcEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHH
Q 013851 68 VKGNVHPNGVAVITLDRP-KALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEV 146 (435)
Q Consensus 68 i~~~~~~~~v~~Itlnrp-~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 146 (435)
+.++..+++|++|||||| ++.|+||.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++......+....+
T Consensus 7 ~~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~~~~~~~~~ 86 (708)
T PRK11154 7 FTLNVREDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACKTAQEAEAL 86 (708)
T ss_pred EEEEEcCCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccCCHHHHHHH
Confidence 455654689999999999 6899999999999999999999999999999999866899999999988543212222234
Q ss_pred HHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCC--ceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 147 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 147 ~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~--a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
......++.+|..+||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|++++|.. +++
T Consensus 87 ~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~-~A~ 165 (708)
T PRK11154 87 ARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVS-TAL 165 (708)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHH-HHH
Confidence 444556788999999999999999999999999999999999996 58999999999999999999999999998 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
+|++||++++ |+||+++||||++||++++.+.+.+++...+...+...... .+..+-
T Consensus 166 ~llltG~~i~-a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~~~~~~--------------------~~~~~~-- 222 (708)
T PRK11154 166 DMILTGKQLR-AKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRPLPVRE--------------------RLLEGN-- 222 (708)
T ss_pred HHHHhCCcCC-HHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCcCCchh--------------------hhcccC--
Confidence 9999999999 99999999999999999988888777654110000000000 000000
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhC
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 384 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~ 384 (435)
...-..+ .+.+++.+..-.+..-.+++.+|++++.+. ..++.+++..|.+.+..++
T Consensus 223 p~~~~~~---------------~~~~~~~~~~~~~g~~~A~~~~k~~i~~~~---------~~~~~~~l~~E~~~~~~~~ 278 (708)
T PRK11154 223 PLGRALL---------------FKQARKKTLAKTQGNYPAPERILDVVRTGL---------EKGMSSGYEAEARAFGELA 278 (708)
T ss_pred chhHHHH---------------HHHHHHHHHHhcccCChHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHh
Confidence 0000001 122222222223334479999999999876 6789999999999999999
Q ss_pred CCchHHHHHHHHHhcC
Q 013851 385 LRSDFAEGVRAVLVDK 400 (435)
Q Consensus 385 ~s~d~~egv~afl~~K 400 (435)
.++|+++|+++|+.++
T Consensus 279 ~s~~~~~~~~aF~~~~ 294 (708)
T PRK11154 279 MTPESAALRSIFFATT 294 (708)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999764
No 79
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-43 Score=351.71 Aligned_cols=188 Identities=23% Similarity=0.315 Sum_probs=162.1
Q ss_pred ccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhch---
Q 013851 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQL--- 140 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~--- 140 (435)
.++.|.++. +++|++|+||||+++|+||.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++......
T Consensus 8 ~~~~v~~e~-~~~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G-~~FcaG~Dl~~~~~~~~~~~~ 85 (302)
T PRK08272 8 NLKTMTYEV-TGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAG-KGFCAGYDLSAYAEGSSSGGG 85 (302)
T ss_pred CCCeEEEEe-ECCEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCC-CCcccCcCHHHHhhccccccc
Confidence 467788886 689999999999999999999999999999999999999999999998 899999999987543210
Q ss_pred -------------------hHH--HHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccc
Q 013851 141 -------------------SEM--IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 199 (435)
Q Consensus 141 -------------------~~~--~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 199 (435)
... ..++....+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~ 165 (302)
T PRK08272 86 GGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPT 165 (302)
T ss_pred ccccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcch
Confidence 000 01234455677889999999999999999999999999999999999999999999
Q ss_pred cCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHH
Q 013851 200 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLK 258 (435)
Q Consensus 200 ~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~ 258 (435)
++|.+|+. ..+++++|.. ++++|+|||++|+ |+||+++|||+++||++++.+.+
T Consensus 166 ~~gg~~~~---~~~~~~vG~~-~A~~llltG~~i~-a~eA~~~GLv~~vv~~~~l~~~a 219 (302)
T PRK08272 166 RVWGVPAT---GMWAYRLGPQ-RAKRLLFTGDCIT-GAQAAEWGLAVEAVPPEELDERT 219 (302)
T ss_pred hcccCChH---HHHHHHhhHH-HHHHHHHcCCccC-HHHHHHcCCCceecCHHHHHHHH
Confidence 98666643 2567889998 9999999999999 99999999999999988776533
No 80
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.8e-43 Score=348.49 Aligned_cols=284 Identities=19% Similarity=0.152 Sum_probs=212.3
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh--chhHHHHHHHHHHHHH
Q 013851 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN--QLSEMIEVFTAEYSLI 154 (435)
Q Consensus 77 v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~--~~~~~~~~~~~~~~l~ 154 (435)
+++|+||||+++|++|.+|+.+|.++++.++.|++|++|||||.|+++||+|+|++++.... .......+...+++++
T Consensus 38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~~~~~~~~~~~~~~~~l~ 117 (360)
T TIGR03200 38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMV 117 (360)
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcccChhHHHHHHHHHHHHH
Confidence 55699999999999999999999999999999999999999999867999999999876532 1222334444456778
Q ss_pred HHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCC
Q 013851 155 CKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRIS 234 (435)
Q Consensus 155 ~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~ 234 (435)
..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++++++||++++
T Consensus 118 ~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~-rA~~llltGe~~s 196 (360)
T TIGR03200 118 SAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCE-QAMVSGTLCEPWS 196 (360)
T ss_pred HHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHH-HHHHHHHhCCcCc
Confidence 889999999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred cHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCC----CCCCchhhhhhhHHHhhcCCcccHHH
Q 013851 235 TPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSD----PEGEAPLKLLLPQITSCFSSEKSVRQ 310 (435)
Q Consensus 235 ~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~i~~~F~~~~s~~e 310 (435)
|+||+++|||+++||+.+++ ..+ ..+|.-...++++.|... +.....+...+..+.++=
T Consensus 197 -A~EA~~~GLVd~VVp~~~~~---~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-------- 259 (360)
T TIGR03200 197 -AHKAKRLGIIMDVVPALKVD---GKF-----VANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQGT-------- 259 (360)
T ss_pred -HHHHHHcCChheecCchhcC---cch-----hcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhccc--------
Confidence 99999999999999988763 111 112221122222222111 111111111122221110
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCCchHH
Q 013851 311 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFA 390 (435)
Q Consensus 311 i~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~ 390 (435)
. ....+++-.+++..++...-|.++.-+++-+|... ...+...-..-..++...+. .+..
T Consensus 260 --------~--~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~ 319 (360)
T TIGR03200 260 --------I--DLSLLDEAVEALCAKLLNTFPECLTKSIEELRKPK---------LFAWNQNKENSRAWLALNMM-NEAR 319 (360)
T ss_pred --------c--hHhHHHHHHHHHHHHHHHhchHHHHHHHHHhhhHH---------HHHHHhhhhhhHHHHHhhcc-cccc
Confidence 0 00011233333445688889999999999999876 44555555555666655555 8899
Q ss_pred HHHHHHHh
Q 013851 391 EGVRAVLV 398 (435)
Q Consensus 391 egv~afl~ 398 (435)
+|++||-+
T Consensus 320 ~~~~~~~~ 327 (360)
T TIGR03200 320 TGFRAFNE 327 (360)
T ss_pred hhhHHHhc
Confidence 99999983
No 81
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-43 Score=336.48 Aligned_cols=224 Identities=22% Similarity=0.212 Sum_probs=192.9
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIE 145 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~ 145 (435)
+.|.++. +++|++||||||+ .|++|.+|+.+|.++++.++ +++++|||+|.| ++||+|+|++++... .+....
T Consensus 3 ~~i~~~~-~~~v~~itln~~~-~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g-~~F~~G~Dl~~~~~~--~~~~~~ 75 (229)
T PRK06213 3 ELVSYTL-EDGVATITLDDGK-VNALSPAMIDALNAALDQAE--DDRAVVVITGQP-GIFSGGFDLKVMTSG--AQAAIA 75 (229)
T ss_pred ceEEEEe-cCCEEEEEeCCCC-CCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCC-CceEcCcCHHHHhcc--hHhHHH
Confidence 3577775 6899999999985 69999999999999999998 457999999998 899999999987542 222334
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCC-ceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 146 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 146 ~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~-a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
++....+++.++..+||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|+.|+.+++++.+|.. .++
T Consensus 76 ~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~-~a~ 154 (229)
T PRK06213 76 LLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPS-AFQ 154 (229)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHH-HHH
Confidence 5555667888999999999999999999999999999999999999 99999999999998888888899999997 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
++++||++++ |+||+++||||+++|++++.+.+.
T Consensus 155 ~lll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 188 (229)
T PRK06213 155 RAVINAEMFD-PEEAVAAGFLDEVVPPEQLLARAQ--------------------------------------------- 188 (229)
T ss_pred HHHHcCcccC-HHHHHHCCCceeccChHHHHHHHH---------------------------------------------
Confidence 9999999999 999999999999999877654322
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHH
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 379 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~ 379 (435)
+|+ ++|++.||.+++.+|++++... ...+.+.++.|.+.
T Consensus 189 -----------------------~~a----~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~~~~~ 227 (229)
T PRK06213 189 -----------------------AAA----RELAGLNMGAHAATKLKVRAAA---------LEAIRAAIEGDAAE 227 (229)
T ss_pred -----------------------HHH----HHHhcCCHHHHHHHHHHHHHHH---------HHHHHhchhhhhhh
Confidence 333 3689999999999999999875 45677777777654
No 82
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=100.00 E-value=1.2e-42 Score=378.00 Aligned_cols=281 Identities=17% Similarity=0.226 Sum_probs=221.5
Q ss_pred EEEecCcEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEE-eCCCCccccCCCchhhhhhhchhHHHHHH
Q 013851 70 GNVHPNGVAVITLDRP-KALNAMNLDMDIKYKSFLDEWESDPRVKCVLIE-GSGPRAFCAGGDVKEISTQNQLSEMIEVF 147 (435)
Q Consensus 70 ~~~~~~~v~~Itlnrp-~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~-g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~ 147 (435)
+..++++|++|||||| ++.|+||.+|+.+|.++|+.++.|++||+|||+ |.| ++||+|+|++++...........+.
T Consensus 4 ~~~~~~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g-~~FcaG~Dl~~~~~~~~~~~~~~~~ 82 (699)
T TIGR02440 4 LTVREDGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKP-DNFIAGADISMLAACQTAGEAKALA 82 (699)
T ss_pred EEEcCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CceeeccCchhhhccCChhHHHHHH
Confidence 3445789999999999 689999999999999999999999999999974 565 8999999999985422122233344
Q ss_pred HHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCC--ceEecccccCCCCCChhHHHHHhhCCCchHHHHH
Q 013851 148 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 225 (435)
Q Consensus 148 ~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~--a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~ 225 (435)
...+.++..|..+||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|+|++|.. ++++
T Consensus 83 ~~~~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~-~A~~ 161 (699)
T TIGR02440 83 QQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVS-TALD 161 (699)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHH-HHHH
Confidence 45567888999999999999999999999999999999999986 79999999999999999999999999998 9999
Q ss_pred HhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhc-cCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 226 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVT-FSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 226 l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
|++||+.++ |++|+++||||++||++++.+.+.+++... ....+. .... +....+.
T Consensus 162 llltG~~~~-a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~~~~-~~~~---~~~~~~~------------------ 218 (699)
T TIGR02440 162 MILTGKQLR-AKQALKLGLVDDVVPQSILLDTAVEMALKGKPIRKPL-SLQE---RLLEGTP------------------ 218 (699)
T ss_pred HHHcCCcCC-HHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCCCCc-cchh---hhcccCc------------------
Confidence 999999999 999999999999999999988888776530 000000 0000 0000000
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhC
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 384 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~ 384 (435)
.....++ +++.+.++.-....-.+...+|++++.+. ..++.++++.|.+.+..++
T Consensus 219 -~a~~~~~---------------~~~~k~~~~~~~~~~~a~~~~~~~i~~~~---------~~~~~~~l~~E~~~~~~~~ 273 (699)
T TIGR02440 219 -LGRALLF---------------DQAAKKTAKKTQGNYPAAERILDVVRQGL---------AQGMQKGLDAEARAFGELV 273 (699)
T ss_pred -hhHHHHH---------------HHHHHHHHHhcccCChhHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHhc
Confidence 0011111 12222222234445678888999999887 6789999999999999999
Q ss_pred CCchHHHHHHHHHhcC
Q 013851 385 LRSDFAEGVRAVLVDK 400 (435)
Q Consensus 385 ~s~d~~egv~afl~~K 400 (435)
.++|+++++++|+.++
T Consensus 274 ~s~~~~~~~~~f~~~~ 289 (699)
T TIGR02440 274 MTPESAALRSIFFATT 289 (699)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999765
No 83
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=100.00 E-value=2.5e-42 Score=375.77 Aligned_cols=289 Identities=19% Similarity=0.222 Sum_probs=223.7
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhh--chhHHH
Q 013851 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQN--QLSEMI 144 (435)
Q Consensus 67 ~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~--~~~~~~ 144 (435)
.+.++..+++|++|+||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... ......
T Consensus 7 ~i~~~~~~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 85 (714)
T TIGR02437 7 TIQVTALEDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGK-DAFIVGADITEFLGLFALPDAELI 85 (714)
T ss_pred eEEEEEccCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CccccCcCHHHHhhcccCCHHHHH
Confidence 5677755789999999999999999999999999999999999999999999998 7999999999986421 112223
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHH
Q 013851 145 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 224 (435)
Q Consensus 145 ~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~ 224 (435)
.+.....+++.+|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.. .++
T Consensus 86 ~~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~-~A~ 164 (714)
T TIGR02437 86 QWLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGAD-NAL 164 (714)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHH-HHH
Confidence 3444556788899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCC
Q 013851 225 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 304 (435)
Q Consensus 225 ~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 304 (435)
+|++||++++ |++|+++||||+++|.+++.+.+.+++........ ............+ ....+.++|..
T Consensus 165 ~llltG~~~~-A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~ 233 (714)
T TIGR02437 165 EWIASGKENR-AEDALKVGAVDAVVTADKLGAAALQLLKDAINGKL--------DWKAKRQPKLEPL--KLSKIEAMMSF 233 (714)
T ss_pred HHHHcCCcCC-HHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCC--------cccccCCCCcccc--cccchHHHHHH
Confidence 9999999999 99999999999999999998877777644111100 0000000000000 01112333221
Q ss_pred cccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhC
Q 013851 305 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 384 (435)
Q Consensus 305 ~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~ 384 (435)
+++.+.+.......-.+-..+.++++.+. ..+++++++.|.+.|.+++
T Consensus 234 -----------------------~~~~~~~~~~~~~~~pap~~~~~~v~~~~---------~~~~~~gl~~E~~~f~~l~ 281 (714)
T TIGR02437 234 -----------------------TTAKGMVAQVAGPHYPAPMTAVKTIEKAA---------RFGRDKALEIEAKGFVKLA 281 (714)
T ss_pred -----------------------HHHHHHHHHhhcCCCCCHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHh
Confidence 22222222223332233344456777765 5679999999999999999
Q ss_pred CCchHHHHHHHHHhcC
Q 013851 385 LRSDFAEGVRAVLVDK 400 (435)
Q Consensus 385 ~s~d~~egv~afl~~K 400 (435)
.+++.+..++.|+.++
T Consensus 282 ~s~~a~~l~~~ff~~r 297 (714)
T TIGR02437 282 KTSEAKALIGLFLNDQ 297 (714)
T ss_pred CCHHHHHHHHHHhhhH
Confidence 9999999999999764
No 84
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=100.00 E-value=6.9e-43 Score=315.68 Aligned_cols=257 Identities=23% Similarity=0.310 Sum_probs=214.0
Q ss_pred cccccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeC--CCCccccCCCchhhhhhh--
Q 013851 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGS--GPRAFCAGGDVKEISTQN-- 138 (435)
Q Consensus 63 ~~~~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~--g~~~F~aG~Dl~~~~~~~-- 138 (435)
..++.|+|+...++|+.|++|||+++||+.+..+.||.++|..++.|++|.+|||||. |+++||+|+|-+--....
T Consensus 15 ~~y~dI~Y~~~~~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY 94 (282)
T COG0447 15 EGYEDITYEKSVDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGY 94 (282)
T ss_pred CCcceeEEeeccCceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCc
Confidence 3588899997558999999999999999999999999999999999999999999975 788999999987654421
Q ss_pred -chhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCC
Q 013851 139 -QLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGP 217 (435)
Q Consensus 139 -~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~ 217 (435)
..+.... -...++-+.|+.+||||||.|+|+|+|||-.|-+.||+.||+++|+|++...++|-+-++.++.+|.|++
T Consensus 95 ~~d~~~~r--LnvLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~V 172 (282)
T COG0447 95 VDDDGIPR--LNVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIV 172 (282)
T ss_pred cCCccCcc--cchhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHh
Confidence 1111111 1223556678999999999999999999999999999999999999999999999998777888899999
Q ss_pred CchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhH
Q 013851 218 GGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQ 297 (435)
Q Consensus 218 G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (435)
|.. +|+|+.+.++.++ |+||+++|+||.|||.++|++..
T Consensus 173 GqK-kArEIwfLcR~Y~-A~eal~MGlVN~Vvp~~~LE~e~--------------------------------------- 211 (282)
T COG0447 173 GQK-KAREIWFLCRQYD-AEEALDMGLVNTVVPHADLEKET--------------------------------------- 211 (282)
T ss_pred hhh-hhHHhhhhhhhcc-HHHHHhcCceeeeccHHHHHHHH---------------------------------------
Confidence 998 9999999999999 99999999999999999987522
Q ss_pred HHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHH
Q 013851 298 ITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEY 377 (435)
Q Consensus 298 i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~ 377 (435)
.+||+ +|.++||.+++..|.+++.-- .++.-.-+..-
T Consensus 212 -----------------------------v~W~~----E~l~kSP~AlR~LK~Afnad~----------DGlaG~q~~ag 248 (282)
T COG0447 212 -----------------------------VQWAR----EMLAKSPTALRMLKAAFNADC----------DGLAGLQELAG 248 (282)
T ss_pred -----------------------------HHHHH----HHHhcChHHHHHHHHHhcCCC----------chhhHHHHhcc
Confidence 26877 799999999999999998532 23322222222
Q ss_pred HHHHHhCCCchHHHHHHHHHhcCCCCCCCC
Q 013851 378 RVALRSSLRSDFAEGVRAVLVDKDQNPKWN 407 (435)
Q Consensus 378 ~~~~~~~~s~d~~egv~afl~~K~r~P~w~ 407 (435)
....-.+.+++.+||-.||+ +| |+|.|.
T Consensus 249 ~at~L~YmTdEa~EGr~AF~-eK-R~Pdf~ 276 (282)
T COG0447 249 NATLLYYMTDEAQEGRDAFL-EK-RKPDFS 276 (282)
T ss_pred cceEEEEechhhhhhHHHHh-hc-cCCChH
Confidence 22233457999999999999 88 899975
No 85
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=100.00 E-value=6.9e-41 Score=365.25 Aligned_cols=296 Identities=19% Similarity=0.218 Sum_probs=216.9
Q ss_pred ccccccEEEEEecCcEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEE-EEEeCCCCccccCCCchhhhhhhc
Q 013851 62 AGAEEFVKGNVHPNGVAVITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCV-LIEGSGPRAFCAGGDVKEISTQNQ 139 (435)
Q Consensus 62 ~~~~~~i~~~~~~~~v~~Itlnrp~-~~Nal~~~m~~eL~~al~~~~~d~~vr~v-Vl~g~g~~~F~aG~Dl~~~~~~~~ 139 (435)
.+.++.+.++. +++|++||||||+ +.|+||.+|+.+|.++++.++.|+++|+| |++|.| ++||+|+|++++.....
T Consensus 9 ~~~~~~~~~~~-~~gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g-~~F~aG~Dl~~~~~~~~ 86 (737)
T TIGR02441 9 LMARTHRHYEV-KGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKP-GSFVAGADIQMIAACKT 86 (737)
T ss_pred CCCCCeEEEEE-ECCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCC-CcceeCcCHHHHhccCC
Confidence 35567788886 7999999999998 58999999999999999999999999975 568887 89999999999864222
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCC--ceEecccccCCCCCChhHHHHHhhCC
Q 013851 140 LSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENGIGLFPDVGFSYIAAKGP 217 (435)
Q Consensus 140 ~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~--a~f~~pe~~~Gl~P~~g~~~~l~r~~ 217 (435)
.+....+.....+++.+|..+||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|+|++
T Consensus 87 ~~~~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprli 166 (737)
T TIGR02441 87 AQEVTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLT 166 (737)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhh
Confidence 2233344455667888999999999999999999999999999999999987 58999999999999999999999999
Q ss_pred CchHHHHHHhhcCCCCCcHHHHHHcCccceecCC-------------CChHHHHHHHHhhccCCCcHHHHHHHHHhhcCC
Q 013851 218 GGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS-------------GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSD 284 (435)
Q Consensus 218 G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~-------------~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~ 284 (435)
|.. ++++|++||++++ |++|+++||||++||+ +++.+.+.+++....... ....++...
T Consensus 167 G~~-~A~~l~ltG~~i~-a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~------~~~~~~~~~ 238 (737)
T TIGR02441 167 GVP-AALDMMLTGKKIR-ADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGK------LSINRDKGL 238 (737)
T ss_pred CHH-HHHHHHHcCCcCC-HHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhccc------CCccccccc
Confidence 998 9999999999999 9999999999999986 223333333322100000 000000000
Q ss_pred CCCCchhhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCc
Q 013851 285 PEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDN 364 (435)
Q Consensus 285 ~~~~~~~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~ 364 (435)
+...... .....+. -..++ +.+++.+..-.+....+...+.+++..+.
T Consensus 239 ~~~~~~~-----~~~~~~~----~~~~~---------------~~~~~~~~~~~~g~~~Ap~~~l~~v~~~~-------- 286 (737)
T TIGR02441 239 VHKITQY-----VMTNPFV----RQQVY---------------KTAEDKVMKQTKGLYPAPLKILDVVRTGY-------- 286 (737)
T ss_pred cCccchh-----hcccchh----HHHHH---------------HHHHHHHHHhccCCCccHHHHHHHHHHHh--------
Confidence 0000000 0000000 00111 22222111222332445555667787775
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCchHHHHHHHHHhcC
Q 013851 365 ELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 400 (435)
Q Consensus 365 ~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K 400 (435)
..+++++++.|.+.|..++.+++.+.-+..|+.++
T Consensus 287 -~~~~~~gl~~E~~~f~~l~~s~~a~al~~~f~~~~ 321 (737)
T TIGR02441 287 -DQGPDAGYEAESKAFGELSMTFESKALIGLFHGQT 321 (737)
T ss_pred -cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999764
No 86
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=100.00 E-value=2e-40 Score=317.56 Aligned_cols=184 Identities=15% Similarity=0.158 Sum_probs=155.5
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCce-EEEEEeCCCCccccCCCchhhhhhh-chhHHHH
Q 013851 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVK-CVLIEGSGPRAFCAGGDVKEISTQN-QLSEMIE 145 (435)
Q Consensus 68 i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr-~vVl~g~g~~~F~aG~Dl~~~~~~~-~~~~~~~ 145 (435)
++++. +++|++|+||||++ |+||.+|+.+|.++++.++.|++++ +||++|.| ++||+|+|++++.... .......
T Consensus 2 ~~~~~-~~~v~~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g-~~FsaG~Dl~~~~~~~~~~~~~~~ 78 (239)
T PLN02267 2 CTLEK-RGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEG-KFFSNGFDLAWAQAAGSAPSRLHL 78 (239)
T ss_pred ceeEe-cCCEEEEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCC-CceeCCcCHHHHhccccCHHHHHH
Confidence 45664 68999999999986 9999999999999999999999875 77778876 8999999999875321 1122223
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEc-CCceEecccccCCCCCChhHHHHHhhCCCchHHH-
Q 013851 146 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT-EKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG- 223 (435)
Q Consensus 146 ~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~-e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a- 223 (435)
+.....+++.+|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+.++++++++++|.. ++
T Consensus 79 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~-~a~ 157 (239)
T PLN02267 79 MVAKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSP-AAR 157 (239)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChH-HHH
Confidence 44455677889999999999999999999999999999999998 5689999999999974445588999999987 88
Q ss_pred HHHhhcCCCCCcHHHHHHcCccceecCC-CChHH
Q 013851 224 AYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGS 256 (435)
Q Consensus 224 ~~l~ltG~~i~~A~eA~~~GLv~~vv~~-~~l~~ 256 (435)
++|++||++++ |+||+++|||+++||+ +++.+
T Consensus 158 ~~llltG~~~~-a~eA~~~Glv~~vv~~~~~l~~ 190 (239)
T PLN02267 158 RDVLLRAAKLT-AEEAVEMGIVDSAHDSAEETVE 190 (239)
T ss_pred HHHHHcCCcCC-HHHHHHCCCcceecCCHHHHHH
Confidence 69999999999 9999999999999985 45654
No 87
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=303.43 Aligned_cols=252 Identities=20% Similarity=0.262 Sum_probs=222.4
Q ss_pred ccccEEEEEecCcEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchh-
Q 013851 64 AEEFVKGNVHPNGVAVITLD-RPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLS- 141 (435)
Q Consensus 64 ~~~~i~~~~~~~~v~~Itln-rp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~- 141 (435)
.++.+.++ +.|++.+|.+| ||++.|+|+.+|+.++..+|+.+.+|+++..++++|.| ++||+|.|++.+....+.+
T Consensus 5 ~~~~~vv~-~~~g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G-~~f~sG~Df~~~~~~~~~d~ 82 (266)
T KOG0016|consen 5 RYREIVVT-RENGPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNG-SYFCSGLDFSPFAKALDDDA 82 (266)
T ss_pred cccceEEE-ecCCcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCc-cEEeeccccchhhhcCCCcc
Confidence 35667776 47999999999 99999999999999999999999999999999999998 8999999999987655221
Q ss_pred -----HHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhC
Q 013851 142 -----EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG 216 (435)
Q Consensus 142 -----~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~ 216 (435)
....+.....-....+..+|||+||.|||+|+|.|+.+...||+++|+|+++|..|++++|.+|++|++|.+|++
T Consensus 83 ~~~~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~i 162 (266)
T KOG0016|consen 83 NEESDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKI 162 (266)
T ss_pred cccchhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHh
Confidence 122222333346778899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhh
Q 013851 217 PGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLP 296 (435)
Q Consensus 217 ~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 296 (435)
+|.. .|.+|++.|++++ |+||.+.|||++++|.+++.+
T Consensus 163 mG~~-~A~E~ll~~~klt-A~Ea~~~glVskif~~~tf~~---------------------------------------- 200 (266)
T KOG0016|consen 163 MGSA-SANEMLLFGEKLT-AQEACEKGLVSKIFPAETFNE---------------------------------------- 200 (266)
T ss_pred hchh-hHHHHHHhCCccc-HHHHHhcCchhhhcChHHHHH----------------------------------------
Confidence 9997 9999999999999 999999999999999977754
Q ss_pred HHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHH
Q 013851 297 QITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYE 376 (435)
Q Consensus 297 ~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E 376 (435)
-+.+.++++++.+|.+++..|++++... ...+..+.+.|
T Consensus 201 --------------------------------~v~~~ikq~s~l~p~sl~~~K~L~rs~~---------k~~l~~an~~E 239 (266)
T KOG0016|consen 201 --------------------------------EVLKKIKQYSKLSPESLLGMKKLLRSNI---------KEELIKANEEE 239 (266)
T ss_pred --------------------------------HHHHHHHHHhcCCHHHHHHHHHHHHHHH---------HHHHHHhhHHH
Confidence 2223355788999999999999999987 56799999999
Q ss_pred HHHHHHhCCCchHHHHHHHHHhcC
Q 013851 377 YRVALRSSLRSDFAEGVRAVLVDK 400 (435)
Q Consensus 377 ~~~~~~~~~s~d~~egv~afl~~K 400 (435)
.......|.++|+.+.+.+|+.++
T Consensus 240 ~~~l~~~W~s~e~~~~~~~~~~~~ 263 (266)
T KOG0016|consen 240 CNVLLKQWVSAECLARFKQYLSKK 263 (266)
T ss_pred HHHHHhhccChHHHHHHHHHhccc
Confidence 999999999999999999999544
No 88
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=3e-39 Score=289.49 Aligned_cols=255 Identities=24% Similarity=0.363 Sum_probs=224.1
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHH
Q 013851 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIE 145 (435)
Q Consensus 66 ~~i~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~ 145 (435)
...+++. +++|-.|+||+|+++|.|+.+|+.+|.+.|....++.++|+|||+..| +.||+|.||+++......+.-..
T Consensus 32 ~~g~~~~-~~gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~G-kifSaGH~LKELt~e~g~d~hae 109 (287)
T KOG1682|consen 32 DLGLVKE-HNGVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQG-KIFSAGHNLKELTNEPGSDIHAE 109 (287)
T ss_pred ccccccc-ccceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCC-ccccccccHHHhhcCccchHHHH
Confidence 3444543 589999999999999999999999999999999888999999999998 89999999999987664444456
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHH
Q 013851 146 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 225 (435)
Q Consensus 146 ~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~ 225 (435)
.|+.+.+++..|+++|.|||+-|||+|..+||.|...||++||+++++|..|..++|++-..-| .-|.|.+.+. .+.+
T Consensus 110 vFqtc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPG-vAlaRavpRk-va~~ 187 (287)
T KOG1682|consen 110 VFQTCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPG-VALARAVPRK-VAAY 187 (287)
T ss_pred HHHHHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcc-hhHhhhcchh-HHHH
Confidence 7888889999999999999999999999999999999999999999999999999999632211 2378888887 9999
Q ss_pred HhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhhccCCCcHHHHHHHHHhhcCCCCCCchhhhhhhHHHhhcCCc
Q 013851 226 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 305 (435)
Q Consensus 226 l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~ 305 (435)
|++||.+|+ ++||+..|||+++||.++++..++.++
T Consensus 188 ML~Tg~Pi~-~eeAl~sGlvskvVp~~el~~e~~~i~------------------------------------------- 223 (287)
T KOG1682|consen 188 MLMTGLPIT-GEEALISGLVSKVVPAEELDKEIEEIT------------------------------------------- 223 (287)
T ss_pred HHHhCCCCc-hHHHHHhhhhhhcCCHHHHHHHHHHHH-------------------------------------------
Confidence 999999999 999999999999999999886544442
Q ss_pred ccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCC
Q 013851 306 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 385 (435)
Q Consensus 306 ~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~ 385 (435)
.+|...|...+.+.|+.+.... ..+-.+++....+.+...++
T Consensus 224 -----------------------------~~i~~~srav~slgk~f~y~q~---------~ms~~ea~~~~~~~m~~n~q 265 (287)
T KOG1682|consen 224 -----------------------------NAIKAKSRAVISLGKEFYYKQL---------AMSQAEAFSAAQEKMCENFQ 265 (287)
T ss_pred -----------------------------HHHhhhHHHHHHHHHHHHHHHH---------HHhHHHHHHHHHHHHhhccc
Confidence 2578888889999999988876 56778899999999999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCC
Q 013851 386 RSDFAEGVRAVLVDKDQNPKWNP 408 (435)
Q Consensus 386 s~d~~egv~afl~~K~r~P~w~~ 408 (435)
-.|.+|||.+|+ +| |.|+|+|
T Consensus 266 l~d~kegiasf~-~k-rp~~~~h 286 (287)
T KOG1682|consen 266 LGDTKEGIASFF-EK-RPPNWKH 286 (287)
T ss_pred ccchHHHHHHHh-cc-CCCCcCC
Confidence 999999999999 88 8999997
No 89
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=100.00 E-value=3.4e-38 Score=292.42 Aligned_cols=191 Identities=32% Similarity=0.468 Sum_probs=174.5
Q ss_pred EEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchh-HHHHHH
Q 013851 69 KGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLS-EMIEVF 147 (435)
Q Consensus 69 ~~~~~~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~-~~~~~~ 147 (435)
.++. +++|++|+||+|++.|++|.+|+++|.++++.++.|+++++|||+|.| +.||+|+|++++....... ....+.
T Consensus 2 ~~~~-~~~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~-~~Fs~G~dl~~~~~~~~~~~~~~~~~ 79 (195)
T cd06558 2 LVER-DGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAG-KAFCAGADLKELAALSDAGEEARAFI 79 (195)
T ss_pred EEEE-ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceEeCcCHHHHhcccccchhHHHHH
Confidence 3554 579999999999999999999999999999999999999999999985 9999999999987755222 245677
Q ss_pred HHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHh
Q 013851 148 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 227 (435)
Q Consensus 148 ~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ 227 (435)
...+.++.++..+|||+||+|||+|+|+|++++++||+||++++++|++||+++|++|+.|+++++++++|.. .+.+++
T Consensus 80 ~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~-~a~~~~ 158 (195)
T cd06558 80 RELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPA-RARELL 158 (195)
T ss_pred HHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHH-HHHHHH
Confidence 7788899999999999999999999999999999999999999999999999999999999999999999987 999999
Q ss_pred hcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHh
Q 013851 228 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 263 (435)
Q Consensus 228 ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~ 263 (435)
++|+.++ |+||+++|||++++|.+++.+.+.+++.
T Consensus 159 l~g~~~~-a~ea~~~Glv~~~~~~~~l~~~a~~~a~ 193 (195)
T cd06558 159 LTGRRIS-AEEALELGLVDEVVPDEELLAAALELAR 193 (195)
T ss_pred HcCCccC-HHHHHHcCCCCeecChhHHHHHHHHHHh
Confidence 9999999 9999999999999999888877766653
No 90
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=1.6e-37 Score=326.08 Aligned_cols=199 Identities=15% Similarity=0.205 Sum_probs=169.2
Q ss_pred cccccEEEEEecCcEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHh-cCCCceEEEEEeCCCCccccCCCc
Q 013851 63 GAEEFVKGNVHPNGVAVITLDRPK----------ALNAMNLDMDIKYKSFLDEWE-SDPRVKCVLIEGSGPRAFCAGGDV 131 (435)
Q Consensus 63 ~~~~~i~~~~~~~~v~~Itlnrp~----------~~Nal~~~m~~eL~~al~~~~-~d~~vr~vVl~g~g~~~F~aG~Dl 131 (435)
..++++.++. +++|++|+||||+ ++|+||.+|+.+|.++|+.++ .|+++|+|||||.++++||+|+|+
T Consensus 8 ~~~~~v~~~~-~g~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL 86 (546)
T TIGR03222 8 SQYRHWKLTF-DGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANI 86 (546)
T ss_pred CCCceEEEEe-eCCEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCH
Confidence 4567888885 6899999999976 899999999999999999999 789999999999755899999999
Q ss_pred hhhhhhhch--hHHHHHHHHH-HHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCC--ceEeccccc-CCCCC
Q 013851 132 KEISTQNQL--SEMIEVFTAE-YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENG-IGLFP 205 (435)
Q Consensus 132 ~~~~~~~~~--~~~~~~~~~~-~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~--a~f~~pe~~-~Gl~P 205 (435)
+++...... .....+.... ..+...+..+||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P 166 (546)
T TIGR03222 87 FMLGLSTHAWKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLP 166 (546)
T ss_pred HHHhccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCC
Confidence 987532111 1111111111 23445677899999999999999999999999999999986 799999997 99999
Q ss_pred ChhHHHHHh--hCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhh
Q 013851 206 DVGFSYIAA--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 264 (435)
Q Consensus 206 ~~g~~~~l~--r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~ 264 (435)
++|++++++ +.+|.. ++++|++||+.|+ |+||++||||+++||++++.+.+.+++..
T Consensus 167 ~~gg~~~l~~~~~vg~~-~A~~llltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ 225 (546)
T TIGR03222 167 GTGGLTRVTDKRRVRRD-HADIFCTIEEGVR-GKRAKEWRLVDEVVKPSQFDAAIAERAAE 225 (546)
T ss_pred ccchhhhccccchhCHH-HHHHHHHcCCCcc-HHHHHHcCCceEEeChHHHHHHHHHHHHH
Confidence 999999997 689997 9999999999999 99999999999999999988877777654
No 91
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=7.2e-37 Score=322.12 Aligned_cols=199 Identities=16% Similarity=0.220 Sum_probs=168.5
Q ss_pred cccccEEEEEecCcEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHHh-cCCCceEEEEEeCCCCccccCCCc
Q 013851 63 GAEEFVKGNVHPNGVAVITLDRP-------K---ALNAMNLDMDIKYKSFLDEWE-SDPRVKCVLIEGSGPRAFCAGGDV 131 (435)
Q Consensus 63 ~~~~~i~~~~~~~~v~~Itlnrp-------~---~~Nal~~~m~~eL~~al~~~~-~d~~vr~vVl~g~g~~~F~aG~Dl 131 (435)
++++.+.++. +++|++|+|||| + +.|+||.+|+.+|.++++.++ .|+++|+|||+|.++++||+|+|+
T Consensus 12 ~~~~~~~~e~-~~~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL 90 (550)
T PRK08184 12 SQYRHWKLSF-DGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANI 90 (550)
T ss_pred CCCceEEEEe-eCCEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCH
Confidence 4678899986 689999999965 4 899999999999999999999 789999999999866899999999
Q ss_pred hhhhhhhchh--HHHHHHHHHH-HHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCC--ceEeccccc-CCCCC
Q 013851 132 KEISTQNQLS--EMIEVFTAEY-SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENG-IGLFP 205 (435)
Q Consensus 132 ~~~~~~~~~~--~~~~~~~~~~-~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~--a~f~~pe~~-~Gl~P 205 (435)
+++....... ....+....+ .+...+..+||||||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P 170 (550)
T PRK08184 91 FMLGGSSHAWKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLP 170 (550)
T ss_pred HhHhccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCC
Confidence 9875422110 1111111111 2345678899999999999999999999999999999987 899999997 99999
Q ss_pred ChhHHHHHh--hCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhh
Q 013851 206 DVGFSYIAA--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 264 (435)
Q Consensus 206 ~~g~~~~l~--r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~ 264 (435)
++|++++++ +.+|.. ++++|++||+.++ |+||+++||||++||++++.+.+.+++..
T Consensus 171 ~~gg~~rl~~~~~vg~~-~A~~llltG~~i~-AeeA~~~GLVd~vv~~d~l~~~a~~~A~~ 229 (550)
T PRK08184 171 GTGGLTRVTDKRKVRRD-LADIFCTIEEGVR-GKRAVDWRLVDEVVKPSKFDAKVAERAAE 229 (550)
T ss_pred CcchHHHhhhhhhcCHH-HHHHHHHhCCccc-HHHHHHcCCccEeeCHHHHHHHHHHHHHH
Confidence 999999998 779997 9999999999999 99999999999999999888777666544
No 92
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.91 E-value=2.5e-24 Score=183.75 Aligned_cols=117 Identities=44% Similarity=0.760 Sum_probs=100.8
Q ss_pred hhhhhhHHHhhcCCcccHHHHHHHHHhcccccchhHHHHHHHHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHH
Q 013851 291 LKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLS 370 (435)
Q Consensus 291 ~~~~~~~i~~~F~~~~s~~ei~~~l~~~~~~~~~~~~~~a~~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~ 370 (435)
+......|++||+.+ |++||+++|+... .+||.++++.|.++||+|+++|.++++++. ..++.
T Consensus 2 L~~~~~~I~~~F~~~-s~~eI~~~L~~~~-------~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~---------~~sl~ 64 (118)
T PF13766_consen 2 LAEHLEAIDRCFSAD-SVEEIIEALEADG-------DEWAQKTLETLRSGSPLSLKVTFEQLRRGR---------NLSLA 64 (118)
T ss_dssp CHHCHHHHHHHTTSS-SHHHHHHHHHHHS--------HHHHHHHHHHCCS-HHHHHHHHHHHHCCT---------TS-HH
T ss_pred hHHHHHHHHHHhCCC-CHHHHHHHHHccC-------cHHHHHHHHHHHHCCHHHHHHHHHHHHHhh---------hCCHH
Confidence 456788999999988 9999999999965 599999999999999999999999999987 68999
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHhcCCCCCCCCCCCcCCCCHHHHHhccc
Q 013851 371 GVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFE 424 (435)
Q Consensus 371 ~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~ 424 (435)
++|++|+++..+++..+||.|||+|.|+||++.|+|+|+++++|+++.|++||+
T Consensus 65 e~l~~E~~~a~~~~~~~DF~EGVRA~LIDKd~~P~W~p~~l~~V~~~~V~~~f~ 118 (118)
T PF13766_consen 65 ECLRMEYRLASRCMRHPDFAEGVRALLIDKDKNPKWSPASLEDVSDEDVDSFFE 118 (118)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHHHHHTTS-------SSSSCCCS-HHHHHHHCS
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHhcCCCCCCCCCCChHHCCHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999995
No 93
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.79 E-value=4.3e-19 Score=162.59 Aligned_cols=141 Identities=16% Similarity=0.048 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccch
Q 013851 95 MDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMG 174 (435)
Q Consensus 95 m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~G 174 (435)
.+.+|.++++.+++|+++++|||++ ||.|+|+.... ...+.+..+.+++|||||+|||.|.|
T Consensus 23 ~~~~l~~~l~~a~~d~~v~~vvl~~-----~~~gg~~~~~~-------------~~~~~i~~~~~~~kpVia~v~G~a~g 84 (177)
T cd07014 23 SGDTTAAQIRDARLDPKVKAIVLRV-----NSPGGSVTASE-------------VIRAELAAARAAGKPVVASGGGNAAS 84 (177)
T ss_pred CHHHHHHHHHHHhcCCCceEEEEEe-----eCCCcCHHHHH-------------HHHHHHHHHHhCCCCEEEEECCchhH
Confidence 4789999999999999999999986 58888876431 12345667778999999999999999
Q ss_pred hhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHH--------HHhhCCC--chHHHHHHhhcCCCCCcHHHHHHcCc
Q 013851 175 FGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY--------IAAKGPG--GGSVGAYLGMTGKRISTPSDALFAGL 244 (435)
Q Consensus 175 gG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~--------~l~r~~G--~~~~a~~l~ltG~~i~~A~eA~~~GL 244 (435)
+|+.|+++||++++++++.|+.+.+..+..+...... .+++..| .. ..++++..|..++ |++|++.||
T Consensus 85 ~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~-~~~~~l~~g~~~~-a~~A~~~GL 162 (177)
T cd07014 85 GGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPE-QQIDKIAQGGVWT-GQDAKANGL 162 (177)
T ss_pred HHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHH-HhHHHhcCcCeEe-HHHHHHcCC
Confidence 9999999999999999999999988766433222222 4445555 54 7888999999999 999999999
Q ss_pred cceecCCCChH
Q 013851 245 GTDYVPSGNLG 255 (435)
Q Consensus 245 v~~vv~~~~l~ 255 (435)
||++.+.+++.
T Consensus 163 VD~v~~~~e~~ 173 (177)
T cd07014 163 VDSLGSFDDAV 173 (177)
T ss_pred cccCCCHHHHH
Confidence 99999876654
No 94
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.76 E-value=4e-18 Score=157.51 Aligned_cols=145 Identities=13% Similarity=0.050 Sum_probs=114.7
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEE-eCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHH
Q 013851 78 AVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIE-GSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICK 156 (435)
Q Consensus 78 ~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~-g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (435)
++|.++ ..++..+...+.+.|+.+++++ ++.|+|. .+ | |+++..- ..++..
T Consensus 2 ~vv~i~-----g~I~~~~~~~l~~~l~~a~~~~-~~~vvl~InS-p-----GG~v~~~----------------~~i~~~ 53 (187)
T cd07020 2 YVLEIN-----GAITPATADYLERAIDQAEEGG-ADALIIELDT-P-----GGLLDST----------------REIVQA 53 (187)
T ss_pred EEEEEe-----eEEChHHHHHHHHHHHHHHhCC-CCEEEEEEEC-C-----CCCHHHH----------------HHHHHH
Confidence 456665 3366777889999999998765 7877776 33 2 2333211 134456
Q ss_pred HhhCCCcEEEEEC---CccchhhhhhhhcCCeEEEcCCceEecccccCCCCCCh--------------hHHHHHhhCCCc
Q 013851 157 ISEYKKPYISLMD---GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV--------------GFSYIAAKGPGG 219 (435)
Q Consensus 157 i~~~~kPvIaavn---G~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~--------------g~~~~l~r~~G~ 219 (435)
|..+||||||+|+ |+|.|||+.|+++||++|++++++|+++++..|..+.. +....+++..|.
T Consensus 54 l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~ 133 (187)
T cd07020 54 ILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRGR 133 (187)
T ss_pred HHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6789999999999 99999999999999999999999999999985554432 345578888887
Q ss_pred --hHHHHHHhhcCCCCCcHHHHHHcCccceecCCC
Q 013851 220 --GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 252 (435)
Q Consensus 220 --~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~ 252 (435)
. .+.+++++|+.++ |+||+++||||+++++.
T Consensus 134 ~~~-~a~~~l~~g~~~~-a~eA~~~Glvd~v~~~~ 166 (187)
T cd07020 134 NAE-WAEKAVRESLSLT-AEEALKLGVIDLIAADL 166 (187)
T ss_pred CHH-HHHHHHHcCCeec-HHHHHHcCCcccccCCH
Confidence 5 7899999999999 99999999999999875
No 95
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.61 E-value=1.7e-15 Score=142.64 Aligned_cols=102 Identities=17% Similarity=0.187 Sum_probs=80.9
Q ss_pred EEEEEEcCC--CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHH
Q 013851 77 VAVITLDRP--KALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLI 154 (435)
Q Consensus 77 v~~Itlnrp--~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~ 154 (435)
|++|.++.| +..+.-+..++.+|.++|+.+..||++++|||+ .||+|+|+..+.. ..+.+
T Consensus 2 i~v~~~~g~i~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~-----~~s~Gg~~~~~~~-------------~~~~l 63 (211)
T cd07019 2 IGVVFANGAIVDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLR-----VNSPGGSVTASEV-------------IRAEL 63 (211)
T ss_pred EEEEEEEEEEeCCCCCCCccCHHHHHHHHHHHhhCCCceEEEEE-----EcCCCcCHHHHHH-------------HHHHH
Confidence 445555433 112333445689999999999999999999996 7999999976531 12345
Q ss_pred HHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEec
Q 013851 155 CKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 196 (435)
Q Consensus 155 ~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~ 196 (435)
..+..++|||||+++|+|.|+|+.|+++||+++|++++.|+.
T Consensus 64 ~~~~~~~kpVia~v~g~a~s~gy~la~~aD~i~a~~~a~~gs 105 (211)
T cd07019 64 AAARAAGKPVVVSAGGAAASGGYWISTPANYIVANPSTLTGS 105 (211)
T ss_pred HHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEcCCCEEEE
Confidence 667889999999999999999999999999999999988864
No 96
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.49 E-value=3.7e-13 Score=127.00 Aligned_cols=98 Identities=17% Similarity=0.179 Sum_probs=75.0
Q ss_pred cCCCCCCC-CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCC
Q 013851 83 DRPKALNA-MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYK 161 (435)
Q Consensus 83 nrp~~~Na-l~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 161 (435)
++|...|+ ++..++.+|.++|+.+++|+.+++|||+. +|.|+++... ..+.+.+..+.. +
T Consensus 13 ~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~-----~s~gg~~~~~-------------~~l~~~l~~~~~-~ 73 (214)
T cd07022 13 PRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI-----DSPGGEVAGV-------------FELADAIRAARA-G 73 (214)
T ss_pred CCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE-----eCCCCcHHHH-------------HHHHHHHHHHhc-C
Confidence 45555565 45789999999999999999999999975 4556655332 112223333434 6
Q ss_pred CcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccc
Q 013851 162 KPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 199 (435)
Q Consensus 162 kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 199 (435)
|||||+++|.|.|+|+.|+++||+++|++.+.|+...+
T Consensus 74 KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~iG~ 111 (214)
T cd07022 74 KPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGSIGV 111 (214)
T ss_pred CCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEeeeE
Confidence 99999999999999999999999999999999865443
No 97
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.47 E-value=4.1e-13 Score=120.89 Aligned_cols=135 Identities=16% Similarity=0.066 Sum_probs=102.9
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECC
Q 013851 91 MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDG 170 (435)
Q Consensus 91 l~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG 170 (435)
++..++.+|.+.|+.++.|+.+++|+|.. .|.|+|+... ..+...|..++||||+.++|
T Consensus 8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~-----~s~Gg~~~~~----------------~~i~~~l~~~~kpvva~~~g 66 (161)
T cd00394 8 IEDVSADQLAAQIRFAEADNSVKAIVLEV-----NTPGGRVDAG----------------MNIVDALQASRKPVIAYVGG 66 (161)
T ss_pred EccchHHHHHHHHHHHHhCCCCceEEEEE-----ECCCcCHHHH----------------HHHHHHHHHhCCCEEEEECC
Confidence 45688999999999999999999999965 3556665432 12444667788999999999
Q ss_pred ccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHH-------------HHHh------hCCCchHHHHHHhhcCC
Q 013851 171 VTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS-------------YIAA------KGPGGGSVGAYLGMTGK 231 (435)
Q Consensus 171 ~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~-------------~~l~------r~~G~~~~a~~l~ltG~ 231 (435)
.|.++|+.|+++||.|++.+++.|++..+..+.....+-. ..+. |-+... ...+++..|.
T Consensus 67 ~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~-~~~~~~~~~~ 145 (161)
T cd00394 67 QAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTE-KLEEDIEKDL 145 (161)
T ss_pred hhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHhcCCc
Confidence 9999999999999999999999999988876554322000 0111 112222 4567788899
Q ss_pred CCCcHHHHHHcCcccee
Q 013851 232 RISTPSDALFAGLGTDY 248 (435)
Q Consensus 232 ~i~~A~eA~~~GLv~~v 248 (435)
.++ |+||+++||||++
T Consensus 146 ~~~-a~eA~~~GLvD~i 161 (161)
T cd00394 146 VLT-AQEALEYGLVDAL 161 (161)
T ss_pred EEc-HHHHHHcCCcCcC
Confidence 999 9999999999975
No 98
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.45 E-value=1.8e-13 Score=146.68 Aligned_cols=155 Identities=19% Similarity=0.201 Sum_probs=117.0
Q ss_pred cCcEEEEEEcCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC--CccccCCCchhhhhhhchhHHHHHHHH
Q 013851 74 PNGVAVITLDRPKA--LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGP--RAFCAGGDVKEISTQNQLSEMIEVFTA 149 (435)
Q Consensus 74 ~~~v~~Itlnrp~~--~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~--~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 149 (435)
++.|++|+++.+=. .|..+....+.+.+.|+.+..|++|++|||+-..| .+||+ ..
T Consensus 307 ~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrinSpGGs~~as--------------------e~ 366 (584)
T TIGR00705 307 QDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRINSPGGSVFAS--------------------EI 366 (584)
T ss_pred CCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEecCCCCCHHHH--------------------HH
Confidence 57899999997632 34444445677888999999999999999996432 33432 11
Q ss_pred HHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceE------eccc------ccCCCCCChhHHHHHhh--
Q 013851 150 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL------AMPE------NGIGLFPDVGFSYIAAK-- 215 (435)
Q Consensus 150 ~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f------~~pe------~~~Gl~P~~g~~~~l~r-- 215 (435)
+++.+..+...+||||+.++|.|.+||+.++++||.++|++.+.+ +++. .++|+.|+...+..+..
T Consensus 367 i~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s 446 (584)
T TIGR00705 367 IRRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVS 446 (584)
T ss_pred HHHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCC
Confidence 123344566778999999999999999999999999999999877 6553 58999887666554432
Q ss_pred --------------------------CCCchHH-----HHHHhhcCCCCCcHHHHHHcCccceecC
Q 013851 216 --------------------------GPGGGSV-----GAYLGMTGKRISTPSDALFAGLGTDYVP 250 (435)
Q Consensus 216 --------------------------~~G~~~~-----a~~l~ltG~~i~~A~eA~~~GLv~~vv~ 250 (435)
.++.+ + ..+.+.+|+.++ |++|+++||||++..
T Consensus 447 ~~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~-R~l~~e~v~~ia~Grv~t-g~eA~~~GLVD~ig~ 510 (584)
T TIGR00705 447 LLRPLTAEDQAIMQLSVEAGYRRFLSVVSAG-RNLTPTQVDKVAQGRVWT-GEDAVSNGLVDALGG 510 (584)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCHHHHHHHHhCCCcC-HHHHHHcCCcccCCC
Confidence 33332 3 677889999999 999999999999953
No 99
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.43 E-value=7.6e-13 Score=119.18 Aligned_cols=130 Identities=15% Similarity=0.170 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccc
Q 013851 94 DMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTM 173 (435)
Q Consensus 94 ~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~ 173 (435)
.+...+.+.|+.+..++.+ .+.|.+.|+..++ ...+...|..++||||+.++|.|.
T Consensus 15 ~~~~~~~~~l~~~~~~~~i-~l~inspGG~~~~-----------------------~~~i~~~i~~~~~pvi~~v~g~a~ 70 (160)
T cd07016 15 VTAKEFKDALDALGDDSDI-TVRINSPGGDVFA-----------------------GLAIYNALKRHKGKVTVKIDGLAA 70 (160)
T ss_pred cCHHHHHHHHHhccCCCCE-EEEEECCCCCHHH-----------------------HHHHHHHHHhcCCCEEEEEcchHH
Confidence 4677888889988887444 3445565522111 124556678889999999999999
Q ss_pred hhhhhhhhcCCeEEEcCCceEecccccCCCCCChh---------------HHHHHhhCCCch-HHHHHHhhcCCCCCcHH
Q 013851 174 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVG---------------FSYIAAKGPGGG-SVGAYLGMTGKRISTPS 237 (435)
Q Consensus 174 GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g---------------~~~~l~r~~G~~-~~a~~l~ltG~~i~~A~ 237 (435)
|+|+.|+++||+|+++++++|+++....|..+... ....+.+..|.. ....+++.++..++ |+
T Consensus 71 s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~-a~ 149 (160)
T cd07016 71 SAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLT-AQ 149 (160)
T ss_pred hHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECc-HH
Confidence 99999999999999999999999887766654432 233366777832 26777777777899 99
Q ss_pred HHHHcCcccee
Q 013851 238 DALFAGLGTDY 248 (435)
Q Consensus 238 eA~~~GLv~~v 248 (435)
||+++||||++
T Consensus 150 eA~~~GliD~v 160 (160)
T cd07016 150 EAVELGFADEI 160 (160)
T ss_pred HHHHcCCCCcC
Confidence 99999999985
No 100
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=99.41 E-value=1.8e-12 Score=121.82 Aligned_cols=100 Identities=21% Similarity=0.188 Sum_probs=79.0
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHH
Q 013851 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICK 156 (435)
Q Consensus 77 v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (435)
|++|.++.+=... ...++.+|.++|+.++.|+++++|+|++ +|.|+|+.... ...+.+..
T Consensus 2 v~vi~i~g~i~~~--~~~~~~~l~~~l~~a~~d~~i~~ivl~~-----~s~Gg~~~~~~-------------~i~~~i~~ 61 (208)
T cd07023 2 IAVIDIEGTISDG--GGIGADSLIEQLRKAREDDSVKAVVLRI-----NSPGGSVVASE-------------EIYREIRR 61 (208)
T ss_pred EEEEEEEEEEcCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEE-----ECCCCCHHHHH-------------HHHHHHHH
Confidence 4555555331101 3678999999999999999999999987 46788886521 12345567
Q ss_pred HhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEec
Q 013851 157 ISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 196 (435)
Q Consensus 157 i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~ 196 (435)
+..++|||||+++|+|.|+|+.|+++||++++++.+.|+.
T Consensus 62 ~~~~~kpvia~v~g~~~s~g~~lA~aaD~i~a~~~s~~g~ 101 (208)
T cd07023 62 LRKAKKPVVASMGDVAASGGYYIAAAADKIVANPTTITGS 101 (208)
T ss_pred HHhcCCcEEEEECCcchhHHHHHHhhCCEEEECCCCeEEe
Confidence 7888999999999999999999999999999999998864
No 101
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=99.29 E-value=4.6e-11 Score=112.22 Aligned_cols=136 Identities=16% Similarity=0.110 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCC--CcEEEEECCccc
Q 013851 96 DIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYK--KPYISLMDGVTM 173 (435)
Q Consensus 96 ~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--kPvIaavnG~a~ 173 (435)
..+|.++|+.+.+|+++++|||++. |.|+|+... ..+...|..++ |||||.++|.|.
T Consensus 15 ~~~l~~~l~~a~~d~~i~~vvl~~~-----s~Gg~~~~~----------------~~l~~~i~~~~~~kpvia~v~g~a~ 73 (207)
T TIGR00706 15 PEDFDKKIKRIKDDKSIKALLLRIN-----SPGGTVVAS----------------EEIYEKLKKLKAKKPVVASMGGVAA 73 (207)
T ss_pred HHHHHHHHHHHhhCCCccEEEEEec-----CCCCCHHHH----------------HHHHHHHHHhcCCCCEEEEECCccc
Confidence 6789999999999999999999874 566666432 12334455565 999999999999
Q ss_pred hhhhhhhhcCCeEEEcCCceEecccc------------cCCCCCC------------------hhHHH------------
Q 013851 174 GFGIGISGHGRYRIVTEKTLLAMPEN------------GIGLFPD------------------VGFSY------------ 211 (435)
Q Consensus 174 GgG~~LalacD~ria~e~a~f~~pe~------------~~Gl~P~------------------~g~~~------------ 211 (435)
|+|+.|+++||.++|++++.|+...+ ++|+-+. .-.-.
T Consensus 74 s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~~~ 153 (207)
T TIGR00706 74 SGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTRELTPEERDILQNLVNESYEQ 153 (207)
T ss_pred hHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988766333 2333210 00000
Q ss_pred H---Hh--hCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChH
Q 013851 212 I---AA--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLG 255 (435)
Q Consensus 212 ~---l~--r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~ 255 (435)
+ .. |-+... ...+ ++.|+.++ +++|++.||||++...+++.
T Consensus 154 f~~~va~~R~~~~~-~~~~-~~~~~~~~-~~~A~~~gLvD~i~~~~~~~ 199 (207)
T TIGR00706 154 FVQVVAKGRNLPVE-DVKK-FADGRVFT-GRQALKLRLVDKLGTEDDAL 199 (207)
T ss_pred HHHHHHhcCCCCHH-HHHH-HhcCCccc-HHHHHHcCCCcccCCHHHHH
Confidence 0 11 222221 2223 46788998 99999999999998655544
No 102
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=99.17 E-value=1.7e-10 Score=109.59 Aligned_cols=91 Identities=12% Similarity=0.071 Sum_probs=74.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEEC
Q 013851 90 AMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMD 169 (435)
Q Consensus 90 al~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavn 169 (435)
.-+..++.+|.+.|+.+..|+.|++|||+..+ ..| ++.++.++. +.+..+...+|||||.++
T Consensus 25 ~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s-~gg-~~~~~~el~----------------~~i~~~~~~~kpVia~~~ 86 (222)
T cd07018 25 ESSELSLRDLLEALEKAAEDDRIKGIVLDLDG-LSG-GLAKLEELR----------------QALERFRASGKPVIAYAD 86 (222)
T ss_pred CcCCccHHHHHHHHHHHhcCCCeEEEEEECCC-CCC-CHHHHHHHH----------------HHHHHHHHhCCeEEEEeC
Confidence 34457799999999999999999999999987 445 666665552 334445667999999999
Q ss_pred CccchhhhhhhhcCCeEEEcCCceEecccc
Q 013851 170 GVTMGFGIGISGHGRYRIVTEKTLLAMPEN 199 (435)
Q Consensus 170 G~a~GgG~~LalacD~ria~e~a~f~~pe~ 199 (435)
| |.+||+.|+++||.++|.+.+.|+...+
T Consensus 87 ~-~~sggy~lasaad~I~a~p~~~vg~iGv 115 (222)
T cd07018 87 G-YSQGQYYLASAADEIYLNPSGSVELTGL 115 (222)
T ss_pred C-CCchhhhhhhhCCEEEECCCceEEeecc
Confidence 8 8899999999999999999999988543
No 103
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=99.16 E-value=3.8e-10 Score=103.39 Aligned_cols=135 Identities=17% Similarity=0.184 Sum_probs=94.9
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEEC
Q 013851 90 AMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMD 169 (435)
Q Consensus 90 al~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavn 169 (435)
.+++.+...|.++|+.+.+++ +..|+|.=..+ |+++.. ...+...|..+++|||+.|+
T Consensus 9 ~I~~~~~~~l~~~l~~a~~~~-~~~ivl~insp-----GG~v~~----------------~~~I~~~l~~~~~pvva~V~ 66 (178)
T cd07021 9 EIDPGLAAFVERALKEAKEEG-ADAVVLDIDTP-----GGRVDS----------------ALEIVDLILNSPIPTIAYVN 66 (178)
T ss_pred EECHHHHHHHHHHHHHHHhCC-CCeEEEEEECc-----CCCHHH----------------HHHHHHHHHhCCCCEEEEEC
Confidence 366778888999999999886 67776643221 223221 22355677889999999999
Q ss_pred CccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhH--------HHH------HhhCCCchH-HHHHHhhcC----
Q 013851 170 GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGF--------SYI------AAKGPGGGS-VGAYLGMTG---- 230 (435)
Q Consensus 170 G~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~--------~~~------l~r~~G~~~-~a~~l~ltG---- 230 (435)
|.|.|+|+.|+++||+++|++++.|+.+++-. ..|+ +.. +.+.-|++. .+..|+--.
T Consensus 67 g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v~----~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~~~a~~mv~~~~~v~ 142 (178)
T cd07021 67 DRAASAGALIALAADEIYMAPGATIGAAEPIP----GDGNGAADEKVQSYWRAKMRAAAEKKGRDPDIAEAMVDKDIEVP 142 (178)
T ss_pred CchHHHHHHHHHhCCeEEECCCCeEecCeeEc----CCCccchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhhhcccc
Confidence 99999999999999999999999999885542 2222 111 222234321 344444433
Q ss_pred ---------CCCCcHHHHHHcCccceecCC
Q 013851 231 ---------KRISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 231 ---------~~i~~A~eA~~~GLv~~vv~~ 251 (435)
-.++ ++||++.|++|.+++.
T Consensus 143 ~~~~~~~~~l~lt-a~eA~~~g~~d~ia~~ 171 (178)
T cd07021 143 GVGIKGGELLTLT-ADEALKVGYAEGIAGS 171 (178)
T ss_pred cccccccceeeeC-HHHHHHhCCeEEEECC
Confidence 2698 9999999999999864
No 104
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.80 E-value=5.5e-09 Score=103.29 Aligned_cols=171 Identities=15% Similarity=0.062 Sum_probs=139.7
Q ss_pred CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHH
Q 013851 75 NGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLI 154 (435)
Q Consensus 75 ~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~ 154 (435)
.++..+.|+ |++ |..|.++..+|..-|+.++.+..+++.++|+.....|++|.|..++.... ..-...++..+.+++
T Consensus 65 ~~~~~~dmv-iea-v~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg~-h~fspa~~m~LlEii 141 (380)
T KOG1683|consen 65 TGFANADMV-IEA-VFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVGM-HFFSPAHWMQLLEII 141 (380)
T ss_pred cccccccee-ccc-hhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhccc-cccCHHHHHHHHHHH
Confidence 378888888 775 99999999999999999999999999999998878999999999987755 333345677788899
Q ss_pred HHHhhCCCcEEEEECCccchhh--hhhhhcCCeEEEcC--CceEecccccCCC-CCChhHHHHHhhCCCchHHHHHHhhc
Q 013851 155 CKISEYKKPYISLMDGVTMGFG--IGISGHGRYRIVTE--KTLLAMPENGIGL-FPDVGFSYIAAKGPGGGSVGAYLGMT 229 (435)
Q Consensus 155 ~~i~~~~kPvIaavnG~a~GgG--~~LalacD~ria~e--~a~f~~pe~~~Gl-~P~~g~~~~l~r~~G~~~~a~~l~lt 229 (435)
....+++.|+.+++||++--|| +-++.+|+|++.-. .-..+..+...++ +|++- .-.+....|.+ .+-.-+--
T Consensus 142 ~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~-iD~~~t~fGf~-~g~~~L~d 219 (380)
T KOG1683|consen 142 LALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWL-IDSLITKFGFR-VGERALAD 219 (380)
T ss_pred HhcCCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHH-HHHHHHhcCcc-ccHHHHhh
Confidence 9999999999999999999888 99999999999974 4444677888884 34443 33344445665 55555666
Q ss_pred CCCCCcHHHHHHcCccceecCC
Q 013851 230 GKRISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 230 G~~i~~A~eA~~~GLv~~vv~~ 251 (435)
|.-++ .+||++-|+++++.|.
T Consensus 220 ~~gfd-v~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 220 GVGFD-VAEALAVGLGDEIGPR 240 (380)
T ss_pred ccCcc-HHHHHhhccchhccch
Confidence 88898 8999999999999984
No 105
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.51 E-value=2e-06 Score=78.27 Aligned_cols=139 Identities=15% Similarity=0.169 Sum_probs=96.5
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEEC
Q 013851 90 AMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMD 169 (435)
Q Consensus 90 al~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavn 169 (435)
.+++.+..-|.+.++.+++| .++.|+|.=.. .|+++... ..++..|...++||++.|+
T Consensus 9 ~I~~~~~~~l~~~l~~A~~~-~~~~i~l~inS-----PGG~v~~~----------------~~I~~~i~~~~~pvv~~v~ 66 (172)
T cd07015 9 QITSYTYDQFDRYITIAEQD-NAEAIIIELDT-----PGGRADAA----------------GNIVQRIQQSKIPVIIYVY 66 (172)
T ss_pred EECHhHHHHHHHHHHHHhcC-CCCeEEEEEEC-----CCCCHHHH----------------HHHHHHHHhcCcCEEEEEe
Confidence 36677788889999998876 46777775332 23333221 1234456678999999999
Q ss_pred ---CccchhhhhhhhcCCeEEEcCCceEecccccCCCCCC----h----hHHHH------HhhCCCch-HHHHHHhhcCC
Q 013851 170 ---GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD----V----GFSYI------AAKGPGGG-SVGAYLGMTGK 231 (435)
Q Consensus 170 ---G~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~----~----g~~~~------l~r~~G~~-~~a~~l~ltG~ 231 (435)
|.|.++|.-++++||.++|.+++.++....-.|..+. . --+.. +.+.-|+. ..+..++-...
T Consensus 67 p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~~~ 146 (172)
T cd07015 67 PPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITKDL 146 (172)
T ss_pred cCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHhhc
Confidence 9999999999999999999999999987765432120 0 00111 11222321 15566667777
Q ss_pred CCCcHHHHHHcCccceecCC
Q 013851 232 RISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 232 ~i~~A~eA~~~GLv~~vv~~ 251 (435)
.++ ++||+++|++|.++..
T Consensus 147 ~lt-a~EA~~~G~iD~ia~~ 165 (172)
T cd07015 147 SLT-PEEALKYGVIEVVARD 165 (172)
T ss_pred CcC-HHHHHHcCCceeeeCC
Confidence 899 9999999999999965
No 106
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=98.49 E-value=1.2e-06 Score=79.16 Aligned_cols=136 Identities=16% Similarity=0.118 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECC
Q 013851 91 MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDG 170 (435)
Q Consensus 91 l~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG 170 (435)
++..+.+++.+.|..++.++.++.|+|.=..| |+++.. ...++..|..+++|+++.+.|
T Consensus 9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~InSp-----GG~v~~----------------~~~i~~~i~~~~~~v~~~~~g 67 (162)
T cd07013 9 VEDISANQFAAQLLFLGAVNPEKDIYLYINSP-----GGDVFA----------------GMAIYDTIKFIKADVVTIIDG 67 (162)
T ss_pred ECcHHHHHHHHHHHHHhcCCCCCCEEEEEECC-----CCcHHH----------------HHHHHHHHHhcCCCceEEEEe
Confidence 46788999999999999887777666643222 233211 123455677789999999999
Q ss_pred ccchhhhhhhhcCC--eEEEcCCceEecccccCCCCCChhHHH---------------HHhhCCCch-HHHHHHhhcCCC
Q 013851 171 VTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGFSY---------------IAAKGPGGG-SVGAYLGMTGKR 232 (435)
Q Consensus 171 ~a~GgG~~LalacD--~ria~e~a~f~~pe~~~Gl~P~~g~~~---------------~l~r~~G~~-~~a~~l~ltG~~ 232 (435)
.|.++|.-|+++|| .|++.+++.|.+....-|......-.. .+.+.-|.. ....+++-.+..
T Consensus 68 ~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~ 147 (162)
T cd07013 68 LAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLERDTW 147 (162)
T ss_pred ehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCcc
Confidence 99999999999999 688888888876543322211110000 112222321 144555666666
Q ss_pred CCcHHHHHHcCcccee
Q 013851 233 ISTPSDALFAGLGTDY 248 (435)
Q Consensus 233 i~~A~eA~~~GLv~~v 248 (435)
++ |+||+++||||++
T Consensus 148 ~s-a~eA~~~GliD~i 162 (162)
T cd07013 148 LS-AREAVEYGFADTI 162 (162)
T ss_pred cc-HHHHHHcCCCCcC
Confidence 78 9999999999975
No 107
>PRK10949 protease 4; Provisional
Probab=98.42 E-value=5.7e-06 Score=89.42 Aligned_cols=159 Identities=18% Similarity=0.134 Sum_probs=102.5
Q ss_pred cCcEEEEEEcCC-----CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHH
Q 013851 74 PNGVAVITLDRP-----KALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFT 148 (435)
Q Consensus 74 ~~~v~~Itlnrp-----~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~ 148 (435)
++.|++|.++.. ...+.++. +.+.+.|+.+..|+.|++|||+-..|+ +... ...
T Consensus 325 ~~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrInSpG-----Gs~~-------------ase 383 (618)
T PRK10949 325 GGSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVNSPG-----GSVT-------------ASE 383 (618)
T ss_pred CCeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEecCCC-----CcHH-------------HHH
Confidence 467888888642 22234443 567788999999999999999876432 1110 011
Q ss_pred HHHHHHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccc------------cCCCCCChhHH------
Q 013851 149 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN------------GIGLFPDVGFS------ 210 (435)
Q Consensus 149 ~~~~l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~------------~~Gl~P~~g~~------ 210 (435)
.+++.+.++....|||||.+.|.|..||..++++||.++|.+.+..+--.+ ++|+-++.-.+
T Consensus 384 ~i~~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~~~ 463 (618)
T PRK10949 384 VIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADV 463 (618)
T ss_pred HHHHHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccCCc
Confidence 223344455667899999999999999999999999999998665443221 34432221100
Q ss_pred -----------H------------HH-----hhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHH
Q 013851 211 -----------Y------------IA-----AKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGS 256 (435)
Q Consensus 211 -----------~------------~l-----~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~ 256 (435)
. ++ .|-+... .. +-+..|+.++ +++|++.||||++-.-++..+
T Consensus 464 ~~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~~~~~-~v-~~ia~Grv~t-g~~A~~~GLVD~lG~~~~ai~ 534 (618)
T PRK10949 464 SITKALPPEFQQMMQLSIENGYKRFITLVADSRHKTPE-QI-DKIAQGHVWT-GQDAKANGLVDSLGDFDDAVA 534 (618)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHH-HH-HHHhcCCccc-HHHHHHcCCCccCCCHHHHHH
Confidence 0 11 1222222 22 2356899999 999999999999976444443
No 108
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.34 E-value=2.8e-06 Score=79.35 Aligned_cols=139 Identities=14% Similarity=0.063 Sum_probs=87.4
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEE
Q 013851 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYIS 166 (435)
Q Consensus 89 Nal~~~m~~eL~~al~~~~~d~~vr~vVl--~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa 166 (435)
..++..+.+.+...|..++.++..+.|.| -+.| +|+.. ...++..|...+.|+++
T Consensus 38 g~I~~~~~~~i~~~L~~l~~~~~~~~I~l~InSpG-------G~v~~----------------g~~I~d~i~~~~~~v~t 94 (200)
T PRK00277 38 GEVEDHMANLIVAQLLFLEAEDPDKDIYLYINSPG-------GSVTA----------------GLAIYDTMQFIKPDVST 94 (200)
T ss_pred CEECHHHHHHHHHHHHHhhccCCCCCEEEEEECCC-------CcHHH----------------HHHHHHHHHhcCCCEEE
Confidence 44778899999999998886543333333 3443 23211 12344456677889999
Q ss_pred EECCccchhhhhhhhcCC--eEEEcCCceEecccccCCCCCChhH---------------HHHHhhCCCch-HHHHHHhh
Q 013851 167 LMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGF---------------SYIAAKGPGGG-SVGAYLGM 228 (435)
Q Consensus 167 avnG~a~GgG~~LalacD--~ria~e~a~f~~pe~~~Gl~P~~g~---------------~~~l~r~~G~~-~~a~~l~l 228 (435)
.+.|.|.++|..|+++++ .|++.++++|.+....-|......- ...+...-|.. .....++-
T Consensus 95 ~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~ 174 (200)
T PRK00277 95 ICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKDTD 174 (200)
T ss_pred EEEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhh
Confidence 999999999999998753 5777777666654433221100000 01122222321 14445556
Q ss_pred cCCCCCcHHHHHHcCccceecCC
Q 013851 229 TGKRISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 229 tG~~i~~A~eA~~~GLv~~vv~~ 251 (435)
.+..++ |+||++.||||+++..
T Consensus 175 ~~~~ls-a~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 175 RDNFMS-AEEAKEYGLIDEVLTK 196 (200)
T ss_pred CCcccc-HHHHHHcCCccEEeec
Confidence 677788 9999999999999975
No 109
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.32 E-value=0.00011 Score=71.15 Aligned_cols=140 Identities=19% Similarity=0.127 Sum_probs=93.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013851 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISL 167 (435)
Q Consensus 88 ~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 167 (435)
.-+++++-.+...+.++.++... +-+|-|.-+. +++. |.+-.+ ......+.+.+..+.....|+|++
T Consensus 76 ~G~~~~~g~rKa~R~~~lA~~~~-lPvV~lvDtp-Ga~~-g~~aE~----------~G~~~~ia~~~~~~s~~~VP~IsV 142 (256)
T PRK12319 76 FGQPHPEGYRKALRLMKQAEKFG-RPVVTFINTA-GAYP-GVGAEE----------RGQGEAIARNLMEMSDLKVPIIAI 142 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECC-CcCC-CHhHHh----------ccHHHHHHHHHHHHhCCCCCEEEE
Confidence 46688999999999998887764 4444443332 3443 332110 112234455667778899999999
Q ss_pred ECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccce
Q 013851 168 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTD 247 (435)
Q Consensus 168 vnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~ 247 (435)
|-|.|.|||......||+++|.+++.|+. .++-|++..+-+--.....+.+.+ .++ +.++++.|+||+
T Consensus 143 I~G~~~gGgA~a~~~~D~v~m~~~a~~~v-------~~pe~~a~il~~~~~~a~~aa~~~----~~~-a~~l~~~g~iD~ 210 (256)
T PRK12319 143 IIGEGGSGGALALAVADQVWMLENTMYAV-------LSPEGFASILWKDGSRATEAAELM----KIT-AGELLEMGVVDK 210 (256)
T ss_pred EeCCcCcHHHHHhhcCCEEEEecCceEEE-------cCHHHHHHHHhcCcccHHHHHHHc----CCC-HHHHHHCCCCcE
Confidence 99999999988888999999999887763 333344433332211111333333 778 999999999999
Q ss_pred ecCCC
Q 013851 248 YVPSG 252 (435)
Q Consensus 248 vv~~~ 252 (435)
++|..
T Consensus 211 ii~e~ 215 (256)
T PRK12319 211 VIPEH 215 (256)
T ss_pred ecCCC
Confidence 99853
No 110
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=98.18 E-value=0.00021 Score=72.68 Aligned_cols=138 Identities=16% Similarity=0.105 Sum_probs=91.1
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 89 Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
.+++++-.+...+.++.++... +=+|-|.-+. +++ .|.+-.+ ......+.+.+..+.....|+|++|
T Consensus 200 G~~~peGyRKAlR~mklAekf~-lPIVtLVDTp-GA~-pG~~AEe----------~Gqa~aIAr~l~ams~l~VPiISVV 266 (431)
T PLN03230 200 AMPQPNGYRKALRFMRHAEKFG-FPILTFVDTP-GAY-AGIKAEE----------LGQGEAIAFNLREMFGLRVPIIATV 266 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCC-CcC-CCHHHHH----------HhHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5688999999999999888763 4444443332 333 3332222 1122334566677889999999999
Q ss_pred CCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCcccee
Q 013851 169 DGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDY 248 (435)
Q Consensus 169 nG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~v 248 (435)
-|.+.|||.....+||+++|.+++.++. +.|.++++..+....-.. .+.+ .-.++ |+++++.|+||+|
T Consensus 267 iGeGgSGGAlalg~aD~VlMle~A~ysV------isPEgaAsILwkd~~~A~-eAAe----alkit-A~dL~~~GiID~I 334 (431)
T PLN03230 267 IGEGGSGGALAIGCGNRMLMMENAVYYV------ASPEACAAILWKSAAAAP-KAAE----ALRIT-AAELVKLGVVDEI 334 (431)
T ss_pred eCCCCcHHHHHhhcCCEEEEecCCEEEe------cCHHHHHHHHhccccchH-HHHH----HcCCC-HHHHHhCCCCeEe
Confidence 9999777766556799999999877653 224444444443322111 3333 33898 9999999999999
Q ss_pred cCC
Q 013851 249 VPS 251 (435)
Q Consensus 249 v~~ 251 (435)
+|.
T Consensus 335 I~E 337 (431)
T PLN03230 335 VPE 337 (431)
T ss_pred ccC
Confidence 974
No 111
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.17 E-value=2.2e-05 Score=73.77 Aligned_cols=138 Identities=14% Similarity=0.083 Sum_probs=94.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013851 90 AMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISL 167 (435)
Q Consensus 90 al~~~m~~eL~~al~~~~~d~~vr~vVl--~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 167 (435)
-++..+..++...|..++..+..+.|.| -+.| +++.. ...++..|..++.|+++.
T Consensus 43 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~INSpG-------G~v~~----------------g~~I~d~i~~~~~~v~t~ 99 (207)
T PRK12553 43 QVDDASANDVMAQLLVLESIDPDRDITLYINSPG-------GSVTA----------------GDAIYDTIQFIRPDVQTV 99 (207)
T ss_pred eECHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCC-------CcHHH----------------HHHHHHHHHhcCCCcEEE
Confidence 4778999999999999987543343333 4444 23211 123455677788899999
Q ss_pred ECCccchhhhhhhhcCC--eEEEcCCceEecccccC-CCCCChhH----------------HHHHhhCCCch-HHHHHHh
Q 013851 168 MDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGI-GLFPDVGF----------------SYIAAKGPGGG-SVGAYLG 227 (435)
Q Consensus 168 vnG~a~GgG~~LalacD--~ria~e~a~f~~pe~~~-Gl~P~~g~----------------~~~l~r~~G~~-~~a~~l~ 227 (435)
+.|.|.++|.-|+++|| .|++.+++.|.+..... |..-+... ...+.+.-|.. ....+++
T Consensus 100 ~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~~~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~~~~ 179 (207)
T PRK12553 100 CTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGGIRGQASDLEIQAREILRMRERLERILAEHTGQSVEKIRKDT 179 (207)
T ss_pred EEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 99999999999999999 59999999998876543 21111000 11223333432 1445566
Q ss_pred hcCCCCCcHHHHHHcCccceecCC
Q 013851 228 MTGKRISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 228 ltG~~i~~A~eA~~~GLv~~vv~~ 251 (435)
-.+..++ |+||+++||||+++..
T Consensus 180 ~~~~~lt-a~EA~e~GliD~I~~~ 202 (207)
T PRK12553 180 DRDKWLT-AEEAKDYGLVDQIITS 202 (207)
T ss_pred hcCcccc-HHHHHHcCCccEEcCc
Confidence 6788898 9999999999999964
No 112
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=98.17 E-value=1.6e-05 Score=72.37 Aligned_cols=134 Identities=16% Similarity=0.091 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEE--eCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 91 MNLDMDIKYKSFLDEWESDPRVKCVLIE--GSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 91 l~~~m~~eL~~al~~~~~d~~vr~vVl~--g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
++..+..++...|..++.++..+.|+|. +.| +|+.. ...++..|...+.|+++.+
T Consensus 18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~inSpG-------G~v~~----------------~~~i~~~l~~~~~~v~t~~ 74 (171)
T cd07017 18 IDDEVANLIIAQLLYLESEDPKKPIYLYINSPG-------GSVTA----------------GLAIYDTMQYIKPPVSTIC 74 (171)
T ss_pred EcHHHHHHHHHHHHHHHccCCCCceEEEEECCC-------CCHHH----------------HHHHHHHHHhcCCCEEEEE
Confidence 5678899999999999987655555543 433 23221 1124445666789999999
Q ss_pred CCccchhhhhhhhcCC--eEEEcCCceEecccccCCCCCChhH---------------HHHHhhCCCch-HHHHHHhhcC
Q 013851 169 DGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGF---------------SYIAAKGPGGG-SVGAYLGMTG 230 (435)
Q Consensus 169 nG~a~GgG~~LalacD--~ria~e~a~f~~pe~~~Gl~P~~g~---------------~~~l~r~~G~~-~~a~~l~ltG 230 (435)
.|.|.++|.-+++++| .|++.+++.|.+.+...+..-...- ...+...-|.. .....++-.+
T Consensus 75 ~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~ 154 (171)
T cd07017 75 LGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRD 154 (171)
T ss_pred EeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCC
Confidence 9999999999999999 7999999999988876554322110 00112222322 1445566677
Q ss_pred CCCCcHHHHHHcCcccee
Q 013851 231 KRISTPSDALFAGLGTDY 248 (435)
Q Consensus 231 ~~i~~A~eA~~~GLv~~v 248 (435)
..++ |+||+++||||+|
T Consensus 155 ~~lt-a~EA~e~GiiD~V 171 (171)
T cd07017 155 RYMS-AEEAKEYGLIDKI 171 (171)
T ss_pred cccc-HHHHHHcCCCccC
Confidence 8898 9999999999975
No 113
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=98.16 E-value=0.00031 Score=69.69 Aligned_cols=139 Identities=12% Similarity=0.086 Sum_probs=92.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013851 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISL 167 (435)
Q Consensus 88 ~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 167 (435)
.-+++++-.+...+.++.++... +-+|-|--+ +++++ |.+-.+ ......+.+.+..+.....|+|++
T Consensus 132 ~G~~~p~g~rKa~Rlm~lA~~f~-lPIItlvDT-pGA~~-G~~AE~----------~G~~~aiar~l~~~a~~~VP~IsV 198 (322)
T CHL00198 132 FGMPSPGGYRKALRLMKHANKFG-LPILTFIDT-PGAWA-GVKAEK----------LGQGEAIAVNLREMFSFEVPIICT 198 (322)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeC-CCcCc-CHHHHH----------HhHHHHHHHHHHHHHcCCCCEEEE
Confidence 46688999999999999888763 344444333 23544 322211 112233445566678899999999
Q ss_pred ECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccce
Q 013851 168 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTD 247 (435)
Q Consensus 168 vnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~ 247 (435)
|-|.|.|||+.....||+++|.+++.|+. +.|.++++..+... +++.+. -..-+++ |++.++.|+||+
T Consensus 199 ViGeggsGGAlal~~aD~V~m~e~a~~sV------isPEg~a~Il~~d~----~~a~~a-A~~~~it-a~dL~~~giiD~ 266 (322)
T CHL00198 199 IIGEGGSGGALGIGIGDSIMMLEYAVYTV------ATPEACAAILWKDS----KKSLDA-AEALKIT-SEDLKVLGIIDE 266 (322)
T ss_pred EeCcccHHHHHhhhcCCeEEEeCCeEEEe------cCHHHHHHHHhcch----hhHHHH-HHHcCCC-HHHHHhCCCCeE
Confidence 99999888876666799999999987763 23444444433322 234433 3356798 999999999999
Q ss_pred ecCC
Q 013851 248 YVPS 251 (435)
Q Consensus 248 vv~~ 251 (435)
++|.
T Consensus 267 ii~E 270 (322)
T CHL00198 267 IIPE 270 (322)
T ss_pred eccC
Confidence 9984
No 114
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=98.14 E-value=0.00038 Score=69.02 Aligned_cols=139 Identities=16% Similarity=0.072 Sum_probs=91.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013851 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISL 167 (435)
Q Consensus 88 ~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 167 (435)
.-+++++-.+...+.++.++.-. +-+|-|.-+ +++++ |.+..+. .......+.+..+.....|+|++
T Consensus 129 ~G~~~p~g~rKa~R~m~lA~~f~-iPvVtlvDT-pGa~~-g~~aE~~----------G~~~aia~~l~a~s~~~VP~IsV 195 (316)
T TIGR00513 129 FGMPAPEGYRKALRLMKMAERFK-MPIITFIDT-PGAYP-GIGAEER----------GQSEAIARNLREMARLGVPVICT 195 (316)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEEC-CCCCC-CHHHHHH----------HHHHHHHHHHHHHHcCCCCEEEE
Confidence 46688999999999998888753 444444333 23443 3222111 12233445666788899999999
Q ss_pred ECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccce
Q 013851 168 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTD 247 (435)
Q Consensus 168 vnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~ 247 (435)
|-|.|.|||......||+++|.+++.++ ++++-|+...+-+--. .+.+..- -..++ ++++++.|+||.
T Consensus 196 ViGeggsGGAla~~~aD~v~m~~~a~~s-------VisPEg~a~Il~kd~~---~a~~aae-~~~~t-a~~l~~~G~iD~ 263 (316)
T TIGR00513 196 VIGEGGSGGALAIGVGDKVNMLEYSTYS-------VISPEGCAAILWKDAS---KAPKAAE-AMKIT-APDLKELGLIDS 263 (316)
T ss_pred EecccccHHHhhhccCCEEEEecCceEE-------ecCHHHHHHHhccchh---hHHHHHH-HccCC-HHHHHHCCCCeE
Confidence 9999988887655579999999887765 4444444444433211 2222222 36778 999999999999
Q ss_pred ecCC
Q 013851 248 YVPS 251 (435)
Q Consensus 248 vv~~ 251 (435)
|+|.
T Consensus 264 II~e 267 (316)
T TIGR00513 264 IIPE 267 (316)
T ss_pred eccC
Confidence 9984
No 115
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=98.07 E-value=0.00052 Score=74.06 Aligned_cols=139 Identities=13% Similarity=0.052 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013851 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISL 167 (435)
Q Consensus 88 ~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 167 (435)
.-+++++-++...+.++.++... +-+|-|.=+ +++++ |.+..+. .....+.+.+..+.....|+|++
T Consensus 220 fG~~~peGyRKAlRlmkLAekfg-LPIVtLVDT-pGA~p-G~~AEe~----------Gq~~aIArnl~amasl~VP~ISV 286 (762)
T PLN03229 220 FGMPTPHGYRKALRMMYYADHHG-FPIVTFIDT-PGAYA-DLKSEEL----------GQGEAIAHNLRTMFGLKVPIVSI 286 (762)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEEC-CCcCC-CchhHHH----------hHHHHHHHHHHHHhCCCCCEEEE
Confidence 45788888999999988887753 344444332 23443 3332221 12233445667788899999999
Q ss_pred ECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccce
Q 013851 168 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTD 247 (435)
Q Consensus 168 vnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~ 247 (435)
|-|.|.|||+.....||+++|.+++.++ +.++-|++..+-+-.. .+.+ +-..-.|+ |++.+++|+||+
T Consensus 287 ViGeggSGGAlA~g~aD~VlMle~A~~s-------VisPEgaAsILwkd~~---~A~e-AAe~lkiT-a~dL~~lGiiD~ 354 (762)
T PLN03229 287 VIGEGGSGGALAIGCANKLLMLENAVFY-------VASPEACAAILWKSAK---AAPK-AAEKLRIT-AQELCRLQIADG 354 (762)
T ss_pred EeCCcchHHHHHhhcCCEEEEecCCeEE-------ecCHHHHHHHHhcCcc---cHHH-HHHHcCCC-HHHHHhCCCCee
Confidence 9999998888888889999999887655 3444444444433322 3333 23456798 999999999999
Q ss_pred ecCC
Q 013851 248 YVPS 251 (435)
Q Consensus 248 vv~~ 251 (435)
|+|.
T Consensus 355 IIpE 358 (762)
T PLN03229 355 IIPE 358 (762)
T ss_pred eccC
Confidence 9984
No 116
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=98.04 E-value=0.00065 Score=67.48 Aligned_cols=139 Identities=16% Similarity=0.099 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013851 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISL 167 (435)
Q Consensus 88 ~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 167 (435)
.-+++++-.+...+.++.++.-. +-+|-|.-+ +++++ |.+-.+ ........+.+..+.....|+|++
T Consensus 129 ~G~~~peg~rKa~R~m~lA~~f~-lPIVtlvDT-pGa~~-G~~aE~----------~G~~~aia~~l~~~a~~~VP~IsV 195 (319)
T PRK05724 129 FGMPRPEGYRKALRLMKMAEKFG-LPIITFIDT-PGAYP-GIGAEE----------RGQSEAIARNLREMARLKVPIICT 195 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeC-CCCCC-CHHHHh----------ccHHHHHHHHHHHHhCCCCCEEEE
Confidence 45688999999999988887753 444544433 23443 332211 112334456677788999999999
Q ss_pred ECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccce
Q 013851 168 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTD 247 (435)
Q Consensus 168 vnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~ 247 (435)
|-|.|.|||......||+++|.+++.|+ ++++-|++..+-+-.. .+.+..- ...++ ++++++.|+||+
T Consensus 196 IiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~---~a~~aae-~~~it-a~~l~~~g~iD~ 263 (319)
T PRK05724 196 VIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDAS---KAPEAAE-AMKIT-AQDLKELGIIDE 263 (319)
T ss_pred EeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCch---hHHHHHH-HcCCC-HHHHHHCCCceE
Confidence 9999988887666679999998887665 4444445444443321 3333333 55688 999999999999
Q ss_pred ecCC
Q 013851 248 YVPS 251 (435)
Q Consensus 248 vv~~ 251 (435)
|+|.
T Consensus 264 II~E 267 (319)
T PRK05724 264 IIPE 267 (319)
T ss_pred eccC
Confidence 9974
No 117
>PRK11778 putative inner membrane peptidase; Provisional
Probab=98.01 E-value=6.2e-05 Score=75.18 Aligned_cols=157 Identities=13% Similarity=0.043 Sum_probs=94.1
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHH
Q 013851 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSL 153 (435)
Q Consensus 74 ~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l 153 (435)
++.|++|.++.+=..+. ...+-+++...+..+..+ .+|||+-..| |+.+.... .....
T Consensus 89 ~~~v~VI~~~G~I~~~~-~~~l~e~i~a~l~~A~~~---~aVvLridSp-----GG~v~~s~-------------~a~~~ 146 (330)
T PRK11778 89 KPRLFVLDFKGDIDASE-VESLREEITAILAVAKPG---DEVLLRLESP-----GGVVHGYG-------------LAASQ 146 (330)
T ss_pred CCeEEEEEEEEEECCCc-chhhHHHHHHHHHhccCC---CeEEEEEeCC-----CCchhHHH-------------HHHHH
Confidence 46799999886532111 223445666666555543 4677765433 22221100 00111
Q ss_pred HHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEeccccc------------CCCCCC---------hh----
Q 013851 154 ICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG------------IGLFPD---------VG---- 208 (435)
Q Consensus 154 ~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~------------~Gl~P~---------~g---- 208 (435)
+.++....||+|+.+++.|..||..++++||-++|.+.+.++...+- +|+-+. .+
T Consensus 147 l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~~~~~~~lLeKlGI~~evi~aG~yK~a~~pf~ 226 (330)
T PRK11778 147 LQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQIPNFHRLLKKHDIDVELHTAGEYKRTLTLFG 226 (330)
T ss_pred HHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeeeccCHHHHHHHCCCceEEEEecCccCCCCCCC
Confidence 33456778999999999999999999999999999998877664442 222100 00
Q ss_pred -----H------------HHH---HhhCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChH
Q 013851 209 -----F------------SYI---AAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLG 255 (435)
Q Consensus 209 -----~------------~~~---l~r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~ 255 (435)
. ..+ ..+.-+ . ...+-+.+|+.++ |++|++.||||++...+++.
T Consensus 227 ~~see~Re~~q~~Ld~~y~~F~~~Va~~R~-~-l~~~~va~G~v~~-g~~Al~~GLVD~Ig~~dd~i 290 (330)
T PRK11778 227 ENTEEGREKFREELEETHQLFKDFVQRYRP-Q-LDIDKVATGEHWY-GQQALELGLVDEIQTSDDYL 290 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-c-CCHHHHHhCCCcC-HHHHHHCCCCCcCCCHHHHH
Confidence 0 000 011001 1 1233456899999 99999999999998765543
No 118
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.99 E-value=0.00012 Score=68.15 Aligned_cols=137 Identities=16% Similarity=0.093 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 91 MNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 91 l~~~m~~eL~~al~~~~~d~~vr~vVl--~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
++..+...+...|..++..+..+.|+| -+.| +++.. ....+..|...+.||++.+
T Consensus 32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~INSpG-------G~v~a----------------g~aI~d~i~~~~~~V~t~v 88 (197)
T PRK14512 32 INKDLSELFQEKILLLEALDSKKPIFVYIDSEG-------GDIDA----------------GFAIFNMIRFVKPKVFTIG 88 (197)
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEEECCC-------CCHHH----------------HHHHHHHHHhCCCCEEEEE
Confidence 667888999998888876222233333 3444 23211 1234556777899999999
Q ss_pred CCccchhhhhhhhcCCe--EEEcCCceEecccccCCCCCChhHH---------------HHHhhCCCch-HHHHHHhhcC
Q 013851 169 DGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFS---------------YIAAKGPGGG-SVGAYLGMTG 230 (435)
Q Consensus 169 nG~a~GgG~~LalacD~--ria~e~a~f~~pe~~~Gl~P~~g~~---------------~~l~r~~G~~-~~a~~l~ltG 230 (435)
.|.|.+.|.-|+++||- |++.++++|.+....-|+.....-. ..+.+.-|.. .....++-..
T Consensus 89 ~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~~d 168 (197)
T PRK14512 89 VGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTDRD 168 (197)
T ss_pred EeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhhcC
Confidence 99999999999999985 9999999887655433321111100 0112222321 1344455555
Q ss_pred CCCCcHHHHHHcCccceecCC
Q 013851 231 KRISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 231 ~~i~~A~eA~~~GLv~~vv~~ 251 (435)
..++ |+||+++||||+|++.
T Consensus 169 ~~lt-a~EA~~yGliD~I~~~ 188 (197)
T PRK14512 169 FWLD-SSSAVKYGLVFEVVET 188 (197)
T ss_pred cccC-HHHHHHcCCccEeecC
Confidence 6788 9999999999999975
No 119
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=97.98 E-value=2e-05 Score=72.42 Aligned_cols=137 Identities=19% Similarity=0.157 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHHHHHHhcCCCce--EEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 91 MNLDMDIKYKSFLDEWESDPRVK--CVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 91 l~~~m~~eL~~al~~~~~d~~vr--~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
+|.++...+.+.|..++..+..+ .|.|.+.| +|+.. ...+...|..++.|+++.+
T Consensus 25 I~~~~~~~~~~~L~~l~~~~~~~~i~i~INSpG-------G~v~~----------------g~~i~~~i~~~~~~v~t~~ 81 (182)
T PF00574_consen 25 IDEESANRLISQLLYLENEDKNKPINIYINSPG-------GDVDA----------------GLAIYDAIRSSKAPVTTVV 81 (182)
T ss_dssp BSHHHHHHHHHHHHHHHHHTSSSEEEEEEEECE-------BCHHH----------------HHHHHHHHHHSSSEEEEEE
T ss_pred cCHHHHHHHHHHHHHHhccCCCceEEEEEcCCC-------CccHH----------------HHHHHHHHHhcCCCeEEEE
Confidence 68899999999888774322222 33345544 33321 2245567888999999999
Q ss_pred CCccchhhhhhhhcCCe--EEEcCCceEecccccCCCCCChhHHH---------------HHhhCCCch-HHHHHHhhcC
Q 013851 169 DGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY---------------IAAKGPGGG-SVGAYLGMTG 230 (435)
Q Consensus 169 nG~a~GgG~~LalacD~--ria~e~a~f~~pe~~~Gl~P~~g~~~---------------~l~r~~G~~-~~a~~l~ltG 230 (435)
.|.|.+.|.-++++|+. |++.+++.|.+.+...+......-.. .+...-|.. ....+++-..
T Consensus 82 ~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~ 161 (182)
T PF00574_consen 82 LGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTGLSKEEIEELMDRD 161 (182)
T ss_dssp EEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHCSST
T ss_pred eCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHhCC
Confidence 99999999999999999 89999999998888655432111111 111111221 1344455555
Q ss_pred CCCCcHHHHHHcCccceecCC
Q 013851 231 KRISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 231 ~~i~~A~eA~~~GLv~~vv~~ 251 (435)
.-++ |+||+++||||+|+..
T Consensus 162 ~~l~-a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 162 TWLS-AEEALEYGIIDEIIES 181 (182)
T ss_dssp EEEE-HHHHHHHTSSSEEESS
T ss_pred cccc-HHHHHHcCCCCEeccC
Confidence 5678 9999999999999853
No 120
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=97.94 E-value=0.00032 Score=67.59 Aligned_cols=109 Identities=16% Similarity=0.185 Sum_probs=82.8
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHH
Q 013851 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSL 153 (435)
Q Consensus 74 ~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l 153 (435)
++.+..+.+ |- .+-++.+...++.++++....+..+- ++|...|+ ++. ...+.
T Consensus 58 qe~~~~~gi--Pi-~~~I~i~dse~v~raI~~~~~~~~Id-Lii~TpGG-------~v~----------------AA~~I 110 (285)
T PF01972_consen 58 QERVSFLGI--PI-YRYIDIDDSEFVLRAIREAPKDKPID-LIIHTPGG-------LVD----------------AAEQI 110 (285)
T ss_pred ccccceecc--cc-ceeEcHhhHHHHHHHHHhcCCCCceE-EEEECCCC-------cHH----------------HHHHH
Confidence 344444444 32 46789999999999999988876653 44555442 221 11245
Q ss_pred HHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhH
Q 013851 154 ICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 209 (435)
Q Consensus 154 ~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~ 209 (435)
...|.+.+.|+++.|+.+|+.||.-+|++||-++|.+.+.+|--+.++|-.|..+.
T Consensus 111 ~~~l~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~si 166 (285)
T PF01972_consen 111 ARALREHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAASI 166 (285)
T ss_pred HHHHHhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHHH
Confidence 55678899999999999999999999999999999999999999999998886543
No 121
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=97.89 E-value=0.00016 Score=67.42 Aligned_cols=139 Identities=12% Similarity=0.070 Sum_probs=93.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEE--EEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013851 90 AMNLDMDIKYKSFLDEWESDPRVKCVL--IEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISL 167 (435)
Q Consensus 90 al~~~m~~eL~~al~~~~~d~~vr~vV--l~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 167 (435)
.+|.++.+++...|-.++.++..+-|. |-+.| +|+.. ....+..|...+.||...
T Consensus 38 ~i~~~~a~~ii~~ll~L~~~~~~~~I~l~INSpG-------G~v~~----------------g~aIyd~m~~~~~~V~Tv 94 (200)
T CHL00028 38 EVDDEIANQLIGLMVYLSIEDDTKDLYLFINSPG-------GSVIS----------------GLAIYDTMQFVKPDVHTI 94 (200)
T ss_pred eecHHHHHHHHHHHHHHhccCCCCCEEEEEeCCC-------cchhh----------------HHHHHHHHHhcCCCEEEE
Confidence 488999999999999987544334333 34444 22211 123555677889999999
Q ss_pred ECCccchhhhhhhhcCC--eEEEcCCceEecccccCCCCCChhHH----------------HHHhhCCCch-HHHHHHhh
Q 013851 168 MDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGFS----------------YIAAKGPGGG-SVGAYLGM 228 (435)
Q Consensus 168 vnG~a~GgG~~LalacD--~ria~e~a~f~~pe~~~Gl~P~~g~~----------------~~l~r~~G~~-~~a~~l~l 228 (435)
+.|.|.+.|.-|++++| -|++.++++|.+.....|..-+...- ..+...-|.. ....+++-
T Consensus 95 ~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i~~~~~ 174 (200)
T CHL00028 95 CLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITRVYAQRTGKPLWVISEDME 174 (200)
T ss_pred EEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhh
Confidence 99999999999999999 69999999999877655522111110 1111222321 13344555
Q ss_pred cCCCCCcHHHHHHcCccceecCCC
Q 013851 229 TGKRISTPSDALFAGLGTDYVPSG 252 (435)
Q Consensus 229 tG~~i~~A~eA~~~GLv~~vv~~~ 252 (435)
....++ |+||+++||||+|+.+.
T Consensus 175 r~~~lt-a~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 175 RDVFMS-ATEAKAYGIVDLVAVNN 197 (200)
T ss_pred cCccCC-HHHHHHcCCCcEEeecC
Confidence 556688 99999999999998654
No 122
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.87 E-value=0.00015 Score=72.54 Aligned_cols=136 Identities=18% Similarity=0.127 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchh
Q 013851 96 DIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGF 175 (435)
Q Consensus 96 ~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~Gg 175 (435)
.+.+.+.|+.+..|+.+++|+|.=..| |+... ....+++.+.++..-. ||++.|+++|..|
T Consensus 82 ~~~~~~~l~~~~~~~~vk~vvL~inSP-----GG~v~-------------as~~i~~~l~~l~~~~-PV~v~v~~~AASG 142 (317)
T COG0616 82 GDDIEEILRAARADPSVKAVVLRINSP-----GGSVV-------------ASELIARALKRLRAKK-PVVVSVGGYAASG 142 (317)
T ss_pred HHHHHHHHHHHhcCCCCceEEEEEECc-----CCchh-------------HHHHHHHHHHHHhhcC-CEEEEECCeecch
Confidence 566677788899999999999864322 21111 1122334444555544 9999999999999
Q ss_pred hhhhhhcCCeEEEcCCceEecccccCCCCCChhHHH--------------------------------------------
Q 013851 176 GIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY-------------------------------------------- 211 (435)
Q Consensus 176 G~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~-------------------------------------------- 211 (435)
|..++++||.+||++.+..|--.+..+. |......
T Consensus 143 GY~IA~aAd~I~a~p~si~GSIGVi~~~-~~~~~l~~k~Gv~~~~~~ag~~k~~~~~~~~~t~e~~~~~q~~~~e~y~~F 221 (317)
T COG0616 143 GYYIALAADKIVADPSSITGSIGVISGA-PNFEELLEKLGVEKEVITAGEYKDILSPFRPLTEEEREILQKEIDETYDEF 221 (317)
T ss_pred hhhhhccCCEEEecCCceeeeceeEEec-CCHHHHHHhcCCceeeeeccccccccCcccCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877654443331 2111111
Q ss_pred --HHhh-CCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCC
Q 013851 212 --IAAK-GPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN 253 (435)
Q Consensus 212 --~l~r-~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~ 253 (435)
.+.. +.... ....-+.+|+-++ +++|++.||||++...++
T Consensus 222 ~~~V~~~R~~~~-~~~~~~a~g~v~~-g~~A~~~gLVDelg~~~~ 264 (317)
T COG0616 222 VDKVAEGRGLSD-EAVDKLATGRVWT-GQQALELGLVDELGGLDD 264 (317)
T ss_pred HHHHHhcCCCCh-hHHHHHhccceec-HHHhhhcCCchhcCCHHH
Confidence 0000 11111 2234567889999 899999999999975433
No 123
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=97.82 E-value=0.00027 Score=65.61 Aligned_cols=137 Identities=14% Similarity=0.043 Sum_probs=89.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013851 90 AMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISL 167 (435)
Q Consensus 90 al~~~m~~eL~~al~~~~~d~~vr~vVl--~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 167 (435)
.++..+...+...|..++.++..+.|+| -+.| +|+.. ...++..|..++.|+...
T Consensus 34 ~I~~~~~~~ii~~L~~l~~~~~~~~i~l~InSpG-------G~v~~----------------g~~I~d~l~~~~~~v~t~ 90 (191)
T TIGR00493 34 EVNDSVANLIVAQLLFLEAEDPEKDIYLYINSPG-------GSITA----------------GLAIYDTMQFIKPDVSTI 90 (191)
T ss_pred EEChHHHHHHHHHHHHhhccCCCCCEEEEEECCC-------CCHHH----------------HHHHHHHHHhcCCCEEEE
Confidence 3667788888888888886554444443 3333 33311 123444566677788888
Q ss_pred ECCccchhhhhhhhcCC--eEEEcCCceEecccccCCCCCChhHH---------------HHHhhCCCch-HHHHHHhhc
Q 013851 168 MDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGFS---------------YIAAKGPGGG-SVGAYLGMT 229 (435)
Q Consensus 168 vnG~a~GgG~~LalacD--~ria~e~a~f~~pe~~~Gl~P~~g~~---------------~~l~r~~G~~-~~a~~l~lt 229 (435)
+.|.|.+.|.-|++++| .|++.+++.|.+.+...|......-. ..+.+.-|.. ....+++-.
T Consensus 91 ~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~~i~~~~~~ 170 (191)
T TIGR00493 91 CIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLEQIEKDTER 170 (191)
T ss_pred EEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhC
Confidence 88999999999998766 69999999999876543332111111 1122223431 145556667
Q ss_pred CCCCCcHHHHHHcCccceecC
Q 013851 230 GKRISTPSDALFAGLGTDYVP 250 (435)
Q Consensus 230 G~~i~~A~eA~~~GLv~~vv~ 250 (435)
+..++ |+||+++||||+++.
T Consensus 171 ~~~lt-a~EA~~~GliD~ii~ 190 (191)
T TIGR00493 171 DFFMS-AEEAKEYGLIDSVLT 190 (191)
T ss_pred CccCc-HHHHHHcCCccEEec
Confidence 77888 999999999999974
No 124
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=97.74 E-value=0.0021 Score=62.71 Aligned_cols=153 Identities=16% Similarity=0.102 Sum_probs=92.8
Q ss_pred cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcC----CCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHH
Q 013851 76 GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESD----PRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEY 151 (435)
Q Consensus 76 ~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d----~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 151 (435)
.|.++-.+..=..-++....-+.+..+++.+..| ..+-+|.|.-+| ++ -+.+-. ..+.. +...+
T Consensus 60 ~v~v~a~D~t~~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSg-Ga-----RlqEg~-----~~L~~-~a~i~ 127 (274)
T TIGR03133 60 PVVVAAQEGRFQGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLDTG-GV-----RLQEAN-----AGLIA-IAEIM 127 (274)
T ss_pred EEEEEEECCCccCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEcCC-Cc-----ChhhhH-----HHHHH-HHHHH
Confidence 3555555555456778888889999999888752 123355555444 22 232210 11111 11222
Q ss_pred HHHHHHhhCCCcEEEEECCc--cchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCch-HHHHHHhh
Q 013851 152 SLICKISEYKKPYISLMDGV--TMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG-SVGAYLGM 228 (435)
Q Consensus 152 ~l~~~i~~~~kPvIaavnG~--a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~-~~a~~l~l 228 (435)
..+..+... .|+|++|.|+ |.||+..++.+||++||++++.+++.-. ..+-...|.. --..+-.|
T Consensus 128 ~~~~~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aGP-----------~VIe~~~G~e~~~~~d~~l 195 (274)
T TIGR03133 128 RAILDARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSGP-----------EVIEQEAGVEEFDSRDRAL 195 (274)
T ss_pred HHHHHHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccCH-----------HHHHHhcCCCccCHHHhcc
Confidence 233344444 9999999999 8999999999999999998877665211 1112222310 02334444
Q ss_pred cCCCCCcHHHHHHcCccceecCCCC
Q 013851 229 TGKRISTPSDALFAGLGTDYVPSGN 253 (435)
Q Consensus 229 tG~~i~~A~eA~~~GLv~~vv~~~~ 253 (435)
.-+.+. +......|++|.+++++.
T Consensus 196 ~~~~lG-G~~~~~sG~~D~~v~dd~ 219 (274)
T TIGR03133 196 VWRTTG-GKHRFLSGDADVLVEDDV 219 (274)
T ss_pred cccccc-hHhHhhcccceEEeCCHH
Confidence 455566 667778999999998743
No 125
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.60 E-value=0.0011 Score=61.76 Aligned_cols=139 Identities=15% Similarity=0.063 Sum_probs=91.2
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEE--EEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013851 90 AMNLDMDIKYKSFLDEWESDPRVKCVL--IEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISL 167 (435)
Q Consensus 90 al~~~m~~eL~~al~~~~~d~~vr~vV--l~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 167 (435)
.++.++..++...|..++.++..+-|. |-+.| +|+.. ....+..|...+.||...
T Consensus 33 ~i~~~~a~~ii~~Ll~l~~~~~~~~I~l~INSpG-------G~v~~----------------g~aIyd~m~~~~~~V~t~ 89 (196)
T PRK12551 33 PVTSDSANRIVAQLLFLEAEDPEKDIYLYINSPG-------GSVYD----------------GLGIFDTMQHVKPDVHTV 89 (196)
T ss_pred eecHHHHHHHHHHHHHhhccCCCCCEEEEEeCCC-------cchhh----------------HHHHHHHHHhcCCCEEEE
Confidence 488899999999999998543323333 34444 22211 123445667788899999
Q ss_pred ECCccchhhhhhhhcCCe--EEEcCCceEecccccCCCCCChhHHH---------------HHhhCCCch-HHHHHHhhc
Q 013851 168 MDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY---------------IAAKGPGGG-SVGAYLGMT 229 (435)
Q Consensus 168 vnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~~Gl~P~~g~~~---------------~l~r~~G~~-~~a~~l~lt 229 (435)
+.|.|.+.|.-|++++|- |++.++++|.+....-|..-...-.. .+.+.-|.. ....+++-.
T Consensus 90 ~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~~r 169 (196)
T PRK12551 90 CVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDR 169 (196)
T ss_pred EEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhc
Confidence 999999999999999985 88999999887665433211110000 112222321 133444555
Q ss_pred CCCCCcHHHHHHcCccceecCCC
Q 013851 230 GKRISTPSDALFAGLGTDYVPSG 252 (435)
Q Consensus 230 G~~i~~A~eA~~~GLv~~vv~~~ 252 (435)
...++ |+||+++||||++++..
T Consensus 170 d~~ms-a~EA~eyGliD~I~~~~ 191 (196)
T PRK12551 170 DFFMS-PSEAVEYGLIDLVIDKR 191 (196)
T ss_pred CcCCC-HHHHHHcCCCcEEeccC
Confidence 56688 99999999999999764
No 126
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.53 E-value=0.0014 Score=61.13 Aligned_cols=138 Identities=14% Similarity=0.104 Sum_probs=93.0
Q ss_pred CCCCHHHHHHHHHHHHHHhcCC---CceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEE
Q 013851 89 NAMNLDMDIKYKSFLDEWESDP---RVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYI 165 (435)
Q Consensus 89 Nal~~~m~~eL~~al~~~~~d~---~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 165 (435)
-.++.++-+.+...|-.++..+ .+.+. |-+.|+ |+.. ....+..|...+-||.
T Consensus 34 ~~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~-INSpGG-------~v~~----------------GlaIyd~m~~~~~~V~ 89 (201)
T PRK14513 34 TPIESQMANTIVAQLLLLDSQNPEQEIQMY-INCPGG-------EVYA----------------GLAIYDTMRYIKAPVS 89 (201)
T ss_pred CEEcHHHHHHHHHHHHHhhccCCCCCEEEE-EECCCC-------chhh----------------HHHHHHHHHhcCCCEE
Confidence 3578889999988888887643 23333 345542 2211 1235556778889999
Q ss_pred EEECCccchhhhhhhhcCCe--EEEcCCceEecccccCCCCCChhHHH-----------------HHhhCCCch-HHHHH
Q 013851 166 SLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY-----------------IAAKGPGGG-SVGAY 225 (435)
Q Consensus 166 aavnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~~Gl~P~~g~~~-----------------~l~r~~G~~-~~a~~ 225 (435)
..+.|.|.+.|.-|++++|- |++.++++|-+.....|+. +.... .+.+.-|.. ..-.+
T Consensus 90 Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~I~~ 167 (201)
T PRK14513 90 TICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEKLLR 167 (201)
T ss_pred EEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 99999999999999999995 9999999998877654531 11111 112222321 13344
Q ss_pred HhhcCCCCCcHHHHHHcCccceecCCCC
Q 013851 226 LGMTGKRISTPSDALFAGLGTDYVPSGN 253 (435)
Q Consensus 226 l~ltG~~i~~A~eA~~~GLv~~vv~~~~ 253 (435)
++-....++ |+||+++||||+|+.+..
T Consensus 168 ~~~rd~~ms-a~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 168 DMERDYFMS-PEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred HhccCcccC-HHHHHHcCCCcEEeccCC
Confidence 445556688 999999999999997644
No 127
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.52 E-value=0.0014 Score=62.00 Aligned_cols=138 Identities=11% Similarity=0.021 Sum_probs=90.2
Q ss_pred CCCCHHHHHHHHHHHHHHhcC---CCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEE
Q 013851 89 NAMNLDMDIKYKSFLDEWESD---PRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYI 165 (435)
Q Consensus 89 Nal~~~m~~eL~~al~~~~~d---~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 165 (435)
-.+|..+.+.+...|..++.. ..+.+. |-+.|+.++ +| ...+..|...+-||.
T Consensus 61 ~~Idd~~a~~i~aqLl~L~~~~~~~~I~ly-INSpGGsv~-aG----------------------laIyd~m~~~~~~V~ 116 (221)
T PRK14514 61 TQIDDYTANTIQAQLLYLDSVDPGKDISIY-INSPGGSVY-AG----------------------LGIYDTMQFISSDVA 116 (221)
T ss_pred CEEcHHHHHHHHHHHHHHhccCCCCCEEEE-EECCCcchh-hH----------------------HHHHHHHHhcCCCEE
Confidence 347888888888877777643 234333 345542211 11 134456777889999
Q ss_pred EEECCccchhhhhhhhcCCe--EEEcCCceEecccccCCCCCChhHH---------------HHHhhCCCch-HHHHHHh
Q 013851 166 SLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFS---------------YIAAKGPGGG-SVGAYLG 227 (435)
Q Consensus 166 aavnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~~Gl~P~~g~~---------------~~l~r~~G~~-~~a~~l~ 227 (435)
..+.|.|.+.|.-|++++|. |++.+++.|.+....-|......-. ..+.+.-|.. ....+++
T Consensus 117 tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~~ 196 (221)
T PRK14514 117 TICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWADS 196 (221)
T ss_pred EEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 99999999999999999996 8999999988776654432211100 0112222431 1334445
Q ss_pred hcCCCCCcHHHHHHcCccceecCC
Q 013851 228 MTGKRISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 228 ltG~~i~~A~eA~~~GLv~~vv~~ 251 (435)
-....++ |+||+++||||+|+..
T Consensus 197 ~rd~wmt-A~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 197 DRDYWMT-AQEAKEYGMIDEVLIK 219 (221)
T ss_pred hcCccCC-HHHHHHcCCccEEeec
Confidence 5566788 9999999999999863
No 128
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=97.48 E-value=0.0021 Score=63.37 Aligned_cols=108 Identities=18% Similarity=0.141 Sum_probs=71.9
Q ss_pred cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC----CceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHH
Q 013851 76 GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDP----RVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEY 151 (435)
Q Consensus 76 ~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~----~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 151 (435)
.|..+-.+..=..-++.......+..+++.+..+. -+-+|+|.-+| + +-+.+-. ..+.. +...+
T Consensus 69 ~v~v~a~D~tf~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSG-G-----aRlqEg~-----~~L~~-~a~i~ 136 (301)
T PRK07189 69 PVVVAAQEGRFMGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFETG-G-----VRLQEAN-----AGLAA-IAEIM 136 (301)
T ss_pred EEEEEEECCCccCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCC-C-----cCccchH-----HHHHH-HHHHH
Confidence 35666666555667888899999999999987764 14566665544 2 2232210 01111 11222
Q ss_pred HHHHHHhhCCCcEEEEECCc--cchhhhhhhhcCCeEEEcCCceEec
Q 013851 152 SLICKISEYKKPYISLMDGV--TMGFGIGISGHGRYRIVTEKTLLAM 196 (435)
Q Consensus 152 ~l~~~i~~~~kPvIaavnG~--a~GgG~~LalacD~ria~e~a~f~~ 196 (435)
..+..+... .|+|++|.|+ |+||+...+.+||++||++++.+++
T Consensus 137 ~~~~~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igl 182 (301)
T PRK07189 137 RAIVDLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGL 182 (301)
T ss_pred HHHHHHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEec
Confidence 333344444 9999999999 9999999999999999999877665
No 129
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=97.44 E-value=0.0064 Score=60.03 Aligned_cols=155 Identities=16% Similarity=0.124 Sum_probs=95.3
Q ss_pred cCcEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHH
Q 013851 74 PNGVAVITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYS 152 (435)
Q Consensus 74 ~~~v~~Itlnrp~-~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 152 (435)
+|.-..|.-|.+. ..-+++...-+.+.++++.+... .+-+|.|.-+| ++ -+.+ .. ..+.+ ......
T Consensus 119 ~G~~V~v~a~D~~f~gGS~g~~~~eKi~r~~e~A~~~-~lPlV~l~dsg-Ga-----rmqE---gi--~sL~~-~ak~~~ 185 (292)
T PRK05654 119 EGMPVVLAVMDFSFMGGSMGSVVGEKIVRAVERAIEE-KCPLVIFSASG-GA-----RMQE---GL--LSLMQ-MAKTSA 185 (292)
T ss_pred CCEEEEEEEEecccccCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-Cc-----chhh---hh--hHHHh-HHHHHH
Confidence 3443444444444 56889999999999999998876 45667776554 22 2211 10 01111 112233
Q ss_pred HHHHHhhCCCcEEEEECCccchhhhh-hhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCC
Q 013851 153 LICKISEYKKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 231 (435)
Q Consensus 153 l~~~i~~~~kPvIaavnG~a~GgG~~-LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~ 231 (435)
.+.++.....|.|+++-|+|.||+.. .++.+|++||.+++.+++-..+ .+...+|. ++ . +
T Consensus 186 a~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~e-----~l--p-e 246 (292)
T PRK05654 186 ALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVRE-----KL--P-E 246 (292)
T ss_pred HHHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhhh-----hh--h-h
Confidence 44455667899999999999999654 5677999999888776652221 11111121 11 1 2
Q ss_pred CCCcHHHHHHcCccceecCCCChHHHHHH
Q 013851 232 RISTPSDALFAGLGTDYVPSGNLGSLKEA 260 (435)
Q Consensus 232 ~i~~A~eA~~~GLv~~vv~~~~l~~~~~~ 260 (435)
.+.+++-+.+.|+||.||++.++......
T Consensus 247 ~~~~ae~~~~~G~vD~Vv~~~e~r~~l~~ 275 (292)
T PRK05654 247 GFQRAEFLLEHGAIDMIVHRRELRDTLAS 275 (292)
T ss_pred hhcCHHHHHhCCCCcEEECHHHHHHHHHH
Confidence 24326778899999999999887654333
No 130
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.38 E-value=0.0067 Score=59.63 Aligned_cols=152 Identities=17% Similarity=0.182 Sum_probs=95.3
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHH
Q 013851 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICK 156 (435)
Q Consensus 77 v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (435)
|+++..|-.-..-+++....+.+.++++.+... .+-+|.|..+| ++ -+.+ .. ..+.. .......+.+
T Consensus 122 V~v~a~D~~f~gGSmg~~~geKi~r~~e~A~~~-~lPlV~l~dSg-Ga-----RmqE---g~--~sL~~-~ak~~~~~~~ 188 (285)
T TIGR00515 122 IVVAVFDFAFMGGSMGSVVGEKFVRAIEKALED-NCPLIIFSASG-GA-----RMQE---AL--LSLMQ-MAKTSAALAK 188 (285)
T ss_pred EEEEEEeccccCCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-Cc-----cccc---ch--hHHHh-HHHHHHHHHH
Confidence 555554444456789999999999999998765 45677776655 22 1111 10 11111 1122233445
Q ss_pred HhhCCCcEEEEECCccchhhhh-hhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCCc
Q 013851 157 ISEYKKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRIST 235 (435)
Q Consensus 157 i~~~~kPvIaavnG~a~GgG~~-LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~ 235 (435)
+.....|.|+++-|+|.||+.. .++.+|++||.+++.+++...+ .+...+|.. +. +.+.+
T Consensus 189 ~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~e~-------lp-e~~q~ 249 (285)
T TIGR00515 189 MSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVREK-------LP-EGFQT 249 (285)
T ss_pred HHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhcCc-------cc-hhcCC
Confidence 6667899999999999999655 5679999999988877763222 112222211 11 22433
Q ss_pred HHHHHHcCccceecCCCChHHHHHH
Q 013851 236 PSDALFAGLGTDYVPSGNLGSLKEA 260 (435)
Q Consensus 236 A~eA~~~GLv~~vv~~~~l~~~~~~ 260 (435)
|+-+.+.|+||.+|++.++......
T Consensus 250 ae~~~~~G~vD~iv~~~~~r~~l~~ 274 (285)
T TIGR00515 250 SEFLLEHGAIDMIVHRPEMKKTLAS 274 (285)
T ss_pred HHHHHhCCCCcEEECcHHHHHHHHH
Confidence 6668889999999999887654333
No 131
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=97.24 E-value=0.014 Score=55.86 Aligned_cols=155 Identities=12% Similarity=0.061 Sum_probs=92.0
Q ss_pred CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHH-hcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHH
Q 013851 75 NGVAVITLDRPKALNAMNLDMDIKYKSFLDEW-ESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSL 153 (435)
Q Consensus 75 ~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~-~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l 153 (435)
+.-..|.=|.|.. .++.+-...+...+... +++..+-+|.|.=.. .|-.|..-.+ .......-++
T Consensus 31 G~~V~vIa~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDtp--G~~~g~~aE~----------~G~~~a~A~l 96 (238)
T TIGR03134 31 GGKVTVIGVVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDTP--SQAYGRREEL----------LGINQALAHL 96 (238)
T ss_pred CEEEEEEEECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeCC--CCCCCHHHHH----------HHHHHHHHHH
Confidence 4444444455543 68877788888888875 455666666665542 3433322222 1222223334
Q ss_pred HHH---HhhCCCcEEEEECCccchhhhhhhh-cCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhc
Q 013851 154 ICK---ISEYKKPYISLMDGVTMGFGIGISG-HGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 229 (435)
Q Consensus 154 ~~~---i~~~~kPvIaavnG~a~GgG~~Lal-acD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~lt 229 (435)
+.. ....+.|+|+.|-|.++|||+.-.. .+|.++|.+ ...++..++-|++..+-+-.. ...++.-+
T Consensus 97 ~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp-------~A~i~vm~~e~aa~I~~~~~~---~~~e~a~~ 166 (238)
T TIGR03134 97 AKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALP-------GAMVHVMDLESMARVTKRSVE---ELEALAKS 166 (238)
T ss_pred HHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcC-------CcEEEecCHHHHHHHHccCHh---HHHHHHHh
Confidence 444 4456699999999999987755443 477776664 455566666666555544332 33444322
Q ss_pred CC--CCCcHHHHHHcCccceecCCCCh
Q 013851 230 GK--RISTPSDALFAGLGTDYVPSGNL 254 (435)
Q Consensus 230 G~--~i~~A~eA~~~GLv~~vv~~~~l 254 (435)
-. ..+ ...+.+.|+||+++++.+-
T Consensus 167 ~~~~a~~-~~~~~~~G~vd~vi~~~~~ 192 (238)
T TIGR03134 167 SPVFAPG-IENFVKLGGVHALLDVADA 192 (238)
T ss_pred hhhhccC-HHHHHhCCCccEEeCCCCc
Confidence 11 244 6679999999999997664
No 132
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=97.19 E-value=0.005 Score=66.69 Aligned_cols=86 Identities=10% Similarity=0.043 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccc
Q 013851 94 DMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTM 173 (435)
Q Consensus 94 ~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~ 173 (435)
-.+.++.++|+.+..|+.|++|||.-.+. .|+++..+ ....+.+..+....|||||..++++
T Consensus 76 ~~l~~i~~~i~~A~~D~~IkgIvL~i~~~----~g~~~~~~-------------~ei~~ai~~fk~sgKpVvA~~~~~~- 137 (584)
T TIGR00705 76 ISLFDIVNAIRQAADDRRIEGLVFDLSNF----SGWDSPHL-------------VEIGSALSEFKDSGKPVYAYGTNYS- 137 (584)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEccCC----CCCCHHHH-------------HHHHHHHHHHHhcCCeEEEEEcccc-
Confidence 35779999999999999999999987531 13332221 1223344455667899999888775
Q ss_pred hhhhhhhhcCCeEEEcCCceEecc
Q 013851 174 GFGIGISGHGRYRIVTEKTLLAMP 197 (435)
Q Consensus 174 GgG~~LalacD~ria~e~a~f~~p 197 (435)
-+|.-|+.+||-+++.+.+.+++.
T Consensus 138 s~~YylAs~AD~I~~~p~G~v~~~ 161 (584)
T TIGR00705 138 QGQYYLASFADEIILNPMGSVDLH 161 (584)
T ss_pred chhhhhhhhCCEEEECCCceEEee
Confidence 678999999999999998777553
No 133
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=97.06 E-value=0.00037 Score=62.30 Aligned_cols=96 Identities=13% Similarity=0.079 Sum_probs=60.0
Q ss_pred hhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEeccccc------------CCC---------CCChh-----HH-
Q 013851 158 SEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG------------IGL---------FPDVG-----FS- 210 (435)
Q Consensus 158 ~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~------------~Gl---------~P~~g-----~~- 210 (435)
....|||||.++|.+..+|.-|+.+||-+++.+.+.++...+. +|+ ....+ .+
T Consensus 3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~ 82 (154)
T PF01343_consen 3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE 82 (154)
T ss_dssp HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence 4679999999999999999999999999999998877764431 222 11111 00
Q ss_pred ---HHHh-----------------hCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHH
Q 013851 211 ---YIAA-----------------KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGS 256 (435)
Q Consensus 211 ---~~l~-----------------r~~G~~~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~l~~ 256 (435)
..+. |-+.. ...+-+..|..++ |++|++.||||++-..+++..
T Consensus 83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~--~~v~~~~~~~~~~-~~~A~~~GLiD~i~~~~~~~~ 145 (154)
T PF01343_consen 83 EERENLQELLDELYDQFVNDVAEGRGLSP--DDVEEIADGGVFT-AQQALELGLIDEIGTFDEAIA 145 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-H--HHHHCHHCCHEEE-HHHHHHTTSSSEETSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCH--HHHHHHHhhcccc-HHHHHHcCchhhcCCHHHHHH
Confidence 0010 11111 1223357888998 999999999999976555543
No 134
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=96.86 E-value=0.038 Score=54.44 Aligned_cols=153 Identities=18% Similarity=0.148 Sum_probs=91.9
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHH
Q 013851 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICK 156 (435)
Q Consensus 77 v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (435)
|+++..+-.=..-++....-+.+.++++.+.... +-+|+|..+| |+-+.+-. ..+.++. .....+..
T Consensus 135 v~v~a~Dftf~gGSmG~v~geKi~ra~e~A~~~r-lPlV~l~~SG------GARmQEg~-----~sL~qma-k~saa~~~ 201 (296)
T CHL00174 135 VALGVMDFQFMGGSMGSVVGEKITRLIEYATNES-LPLIIVCASG------GARMQEGS-----LSLMQMA-KISSALYD 201 (296)
T ss_pred EEEEEECCcccccCcCHHHHHHHHHHHHHHHHcC-CCEEEEECCC------Cccccccc-----hhhhhhH-HHHHHHHH
Confidence 5555555444567899999999999999987764 5566666655 22222210 1111111 11111222
Q ss_pred -HhhCCCcEEEEECCccchhhhhh-hhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCC
Q 013851 157 -ISEYKKPYISLMDGVTMGFGIGI-SGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRIS 234 (435)
Q Consensus 157 -i~~~~kPvIaavnG~a~GgG~~L-alacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~ 234 (435)
...-..|.|+++.|+|.||+... ++.||++|+.+++.+++.-.+ .....+|.. +. +.|-
T Consensus 202 ~~~~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPr-----------VIe~t~ge~-------lp-e~fq 262 (296)
T CHL00174 202 YQSNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKR-----------VIEQTLNKT-------VP-EGSQ 262 (296)
T ss_pred HHHcCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHH-----------HHHHhcCCc-------CC-cccc
Confidence 22456999999999999998776 666999999777665542211 111112211 22 2244
Q ss_pred cHHHHHHcCccceecCCCChHHHHHHH
Q 013851 235 TPSDALFAGLGTDYVPSGNLGSLKEAL 261 (435)
Q Consensus 235 ~A~eA~~~GLv~~vv~~~~l~~~~~~l 261 (435)
+|+-.++.|+||.+|+..++......+
T Consensus 263 ~ae~l~~~G~vD~iV~r~~lr~~l~~l 289 (296)
T CHL00174 263 AAEYLFDKGLFDLIVPRNLLKGVLSEL 289 (296)
T ss_pred cHHHHHhCcCceEEEcHHHHHHHHHHH
Confidence 367788999999999988876544333
No 135
>PRK10949 protease 4; Provisional
Probab=96.83 E-value=0.014 Score=63.60 Aligned_cols=86 Identities=7% Similarity=0.061 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccc
Q 013851 94 DMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTM 173 (435)
Q Consensus 94 ~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~ 173 (435)
-.+.++.++|+.+.+|+.|++|||.-.+++ |..+.. .....+.+..+....|||||.-+.+ -
T Consensus 95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~g----G~~~a~-------------~~eI~~ai~~fk~sGKpVvA~~~~~-~ 156 (618)
T PRK10949 95 NSLFDIVNTIRQAKDDRNITGIVLDLKNFA----GADQPS-------------MQYIGKALREFRDSGKPVYAVGDSY-S 156 (618)
T ss_pred ccHHHHHHHHHHHhcCCCceEEEEEeCCCC----CccHHH-------------HHHHHHHHHHHHHhCCeEEEEecCc-c
Confidence 346789999999999999999999886421 222111 1122334445666789999864444 4
Q ss_pred hhhhhhhhcCCeEEEcCCceEecc
Q 013851 174 GFGIGISGHGRYRIVTEKTLLAMP 197 (435)
Q Consensus 174 GgG~~LalacD~ria~e~a~f~~p 197 (435)
-+|.-||.+||-+++.+.+.+++.
T Consensus 157 s~~YyLASaAD~I~l~P~G~v~~~ 180 (618)
T PRK10949 157 QGQYYLASFANKIYLSPQGVVDLH 180 (618)
T ss_pred chhhhhhhhCCEEEECCCceEEEe
Confidence 679999999999999998776643
No 136
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=96.81 E-value=0.023 Score=58.36 Aligned_cols=150 Identities=15% Similarity=0.092 Sum_probs=103.9
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHH
Q 013851 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSL 153 (435)
Q Consensus 74 ~~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l 153 (435)
++.|..|.++ +.+++.+.+.+.++++.++++.. .+|||.=.-|+. ......+.
T Consensus 25 ~~~v~vi~i~-----g~I~~~s~~~l~r~l~~A~~~~a-~~vvl~ldTPGG---------------------l~~sm~~i 77 (436)
T COG1030 25 EKKVYVIEID-----GAIDPASADYLQRALQSAEEENA-AAVVLELDTPGG---------------------LLDSMRQI 77 (436)
T ss_pred CCeEEEEEec-----CccCHHHHHHHHHHHHHHHhCCC-cEEEEEecCCCc---------------------hHHHHHHH
Confidence 3567777775 56899999999999999998753 444443222221 22334567
Q ss_pred HHHHhhCCCcEEEEEC---CccchhhhhhhhcCCeEEEcCCceEeccccc-CC-CCCC-hh-HHHH------HhhCCCch
Q 013851 154 ICKISEYKKPYISLMD---GVTMGFGIGISGHGRYRIVTEKTLLAMPENG-IG-LFPD-VG-FSYI------AAKGPGGG 220 (435)
Q Consensus 154 ~~~i~~~~kPvIaavn---G~a~GgG~~LalacD~ria~e~a~f~~pe~~-~G-l~P~-~g-~~~~------l~r~~G~~ 220 (435)
+..|.+.+.||+..|. +.|..+|..++++||+..|++.+.++-...- .| -.+. .. -... +.+.-|++
T Consensus 78 v~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~gRN 157 (436)
T COG1030 78 VRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEERGRN 157 (436)
T ss_pred HHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHcCCC
Confidence 7889999999888884 4699999999999999999998888865432 33 1111 11 1111 22333432
Q ss_pred -HHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 013851 221 -SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 221 -~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~ 251 (435)
..+.+++.-...++ ++||++.|++|-+..+
T Consensus 158 ~~~ae~~v~~~~~l~-a~eA~~~~vid~iA~~ 188 (436)
T COG1030 158 PTWAERFVTENLSLT-AEEALRQGVIDLIARD 188 (436)
T ss_pred hHHHHHHhhhccCCC-hhHHHhcCccccccCC
Confidence 16677888888999 9999999999988753
No 137
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=96.71 E-value=0.03 Score=53.01 Aligned_cols=144 Identities=17% Similarity=0.136 Sum_probs=89.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCC---CceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEE
Q 013851 90 AMNLDMDIKYKSFLDEWESDP---RVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYIS 166 (435)
Q Consensus 90 al~~~m~~eL~~al~~~~~d~---~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa 166 (435)
.++.++-+.+...|-.++.++ .+.. -|-+.| +...+|-=+... ......+..|...+-||..
T Consensus 48 ~~~~~~a~~iiaqLl~L~~~~~~k~I~l-yINSpG-Gsv~~G~~iG~v-------------~~glaIyD~m~~ik~~V~T 112 (222)
T PRK12552 48 QVGMDVTELIIAQLLYLEFDDPEKPIYF-YINSTG-TSWYTGDAIGFE-------------TEAFAICDTMRYIKPPVHT 112 (222)
T ss_pred chhHhHHHHHHHHHHHHhccCCCCCEEE-EEeCCC-CCcccccccccc-------------ccHHHHHHHHHhcCCCeEE
Confidence 345558888888888776543 3333 345655 344444111001 1112344566777889999
Q ss_pred EECCccchhhhhhhhcCCe--EEEcCCceEecccccCCCCCChhHHH-----------------HHhhCCCch-HHHHHH
Q 013851 167 LMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY-----------------IAAKGPGGG-SVGAYL 226 (435)
Q Consensus 167 avnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~~Gl~P~~g~~~-----------------~l~r~~G~~-~~a~~l 226 (435)
.+.|.|.+.|.-|++++|- |++.++++|-+.....|.. + -.+- .+.+.-|.. ..-.++
T Consensus 113 v~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~-G-~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~I~~d 190 (222)
T PRK12552 113 ICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR-G-QATDIQIRAKEVLHNKRTMLEILSRNTGQTVEKLSKD 190 (222)
T ss_pred EEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc-c-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 9999999999999999995 9999999988777654432 1 1111 111112221 022223
Q ss_pred hhcCCCCCcHHHHHHcCccceecCC
Q 013851 227 GMTGKRISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 227 ~ltG~~i~~A~eA~~~GLv~~vv~~ 251 (435)
+-....++ |+||+++||||+|+.+
T Consensus 191 ~~rd~wms-A~EA~eyGliD~Ii~~ 214 (222)
T PRK12552 191 TDRMFYLT-PQEAKEYGLIDRVLES 214 (222)
T ss_pred hcCCCcCC-HHHHHHcCCCcEEecc
Confidence 33344588 9999999999999965
No 138
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=96.64 E-value=0.084 Score=56.32 Aligned_cols=161 Identities=12% Similarity=0.107 Sum_probs=97.8
Q ss_pred CcEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHH
Q 013851 75 NGVAVITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSL 153 (435)
Q Consensus 75 ~~v~~Itlnrp~-~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l 153 (435)
|.-.-|.=|+|. ..-+++..-.+...++++.+... .+-+|.|.-.+ .|..|.+- +........-++
T Consensus 314 G~~V~vvAnd~~~~~G~~~~~~~~K~~r~i~~a~~~-~lPlV~lvDs~--G~~~g~~~----------E~~g~~~~~a~~ 380 (512)
T TIGR01117 314 GQSVGIIANQPKVMAGCLDIDSSDKIARFIRFCDAF-NIPIVTFVDVP--GFLPGVNQ----------EYGGIIRHGAKV 380 (512)
T ss_pred CEEEEEEEeccccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCc--CccccHHH----------HHHHHHHHHHHH
Confidence 433334444443 34569999999999999988764 45666665553 26555332 112233444567
Q ss_pred HHHHhhCCCcEEEEECCccchhhhhhhhc----CCeEEEcCCceEecccccCCCCCChhHHHHHhh-CCC---chHHHHH
Q 013851 154 ICKISEYKKPYISLMDGVTMGFGIGISGH----GRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAK-GPG---GGSVGAY 225 (435)
Q Consensus 154 ~~~i~~~~kPvIaavnG~a~GgG~~Lala----cD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r-~~G---~~~~a~~ 225 (435)
+.++.....|.|+.|-|.+.|||..-+.. +|+++|.+++.+ |+.++-++...+-+ .+. ....+..
T Consensus 381 ~~a~~~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~-------~v~~pe~a~~i~~~~~l~~~~~~~~~~~ 453 (512)
T TIGR01117 381 LYAYSEATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEI-------AVMGPAGAANIIFRKDIKEAKDPAATRK 453 (512)
T ss_pred HHHHHhCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeE-------eecCHHHHHHHHhhhhcccccCHHHHHH
Confidence 77888899999999999998886444332 888777766554 45544444433322 111 0001111
Q ss_pred --Hh-hcCCCCCcHHHHHHcCccceecCCCChHH
Q 013851 226 --LG-MTGKRISTPSDALFAGLGTDYVPSGNLGS 256 (435)
Q Consensus 226 --l~-ltG~~i~~A~eA~~~GLv~~vv~~~~l~~ 256 (435)
+. ..-+..+ +..+.+.|+||.|+++.++-.
T Consensus 454 ~~~~~~~~~~~~-~~~~a~~g~vD~VI~P~~tR~ 486 (512)
T TIGR01117 454 QKIAEYREEFAN-PYKAAARGYVDDVIEPKQTRP 486 (512)
T ss_pred HHHHHHHHhhcC-HHHHHhcCCCCeeEChHHHHH
Confidence 11 1122345 888999999999999987653
No 139
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=96.54 E-value=0.043 Score=50.94 Aligned_cols=99 Identities=14% Similarity=0.053 Sum_probs=65.0
Q ss_pred HHHHHhhCCCcEEEEECCccchhhhhhhhcCCeE--EEcCCceEecccccCCCCCChhHHH----------------HHh
Q 013851 153 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYR--IVTEKTLLAMPENGIGLFPDVGFSY----------------IAA 214 (435)
Q Consensus 153 l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~r--ia~e~a~f~~pe~~~Gl~P~~g~~~----------------~l~ 214 (435)
.+..|...+.||...+-|.|...|.-|++++|.. ++.+++++-+.-.. |.+-+...=. .+.
T Consensus 77 Iydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~a~Di~i~A~ei~~~~~~l~~i~a 155 (200)
T COG0740 77 IYDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQASDIEIHAREILKIKERLNRIYA 155 (200)
T ss_pred HHHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4446777899999999999999999999999875 88888777765554 3222111100 111
Q ss_pred hCCCch-HHHHHHhhcCCCCCcHHHHHHcCccceecCCCC
Q 013851 215 KGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN 253 (435)
Q Consensus 215 r~~G~~-~~a~~l~ltG~~i~~A~eA~~~GLv~~vv~~~~ 253 (435)
..-|.. ..-....-....++ |+||+++||||+|+...+
T Consensus 156 ~~TGq~~e~i~~d~drd~~ms-a~eA~~yGLiD~V~~~~~ 194 (200)
T COG0740 156 EHTGQTLEKIEKDTDRDTWMS-AEEAKEYGLIDKVIESRE 194 (200)
T ss_pred HHcCCCHHHHHHhhcccccCC-HHHHHHcCCcceeccccc
Confidence 222322 01122223445688 999999999999997654
No 140
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=96.27 E-value=0.041 Score=58.52 Aligned_cols=140 Identities=19% Similarity=0.174 Sum_probs=90.4
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHH
Q 013851 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICK 156 (435)
Q Consensus 77 v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (435)
|.++..+.--...++.......+..+++.+....- -+|.|.-+| ++| + ++.+.... + ..+...+.....
T Consensus 59 v~v~a~D~t~~gGs~g~~~~~Ki~ra~~~A~~~~~-P~v~l~dsg-Ga~--~-r~~eg~~~-----l-~~~g~i~~~~~~ 127 (493)
T PF01039_consen 59 VVVIAQDFTVLGGSVGEVHGEKIARAIELALENGL-PLVYLVDSG-GAF--L-RMQEGVES-----L-MGMGRIFRAIAR 127 (493)
T ss_dssp EEEEEEETTSGGGTBSHHHHHHHHHHHHHHHHHTE-EEEEEEEES-SBC--G-GGGGHHHH-----H-HHHHHHHHHHHH
T ss_pred EEEEEeccceecCCCCcccceeeehHHHHHHHcCC-CcEEecccc-ccc--c-ccchhhhh-----h-hhhHHHHHHHHH
Confidence 44445554446788999999999999999987754 445554333 221 1 34332211 1 112223333445
Q ss_pred HhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCC-ceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCCCc
Q 013851 157 ISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRIST 235 (435)
Q Consensus 157 i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~-a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i~~ 235 (435)
+.. ..|+|+++.|+|.|||..++..||++|+.++ +.+++. |++ .. + ..+|+.++
T Consensus 128 ~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~--------------------GP~-vv-~-~~~Ge~~~- 182 (493)
T PF01039_consen 128 LSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA--------------------GPR-VV-E-SATGEEVD- 182 (493)
T ss_dssp HHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------THH-HH-H-HHHSSCTS-
T ss_pred Hhc-CCCeEEEEccccccchhhcccccCccccCccceEEEec--------------------ccc-cc-c-cccCcccc-
Confidence 556 9999999999999999999999999999987 665532 222 11 1 23467777
Q ss_pred HHH-------HHHcCccceecCCC
Q 013851 236 PSD-------ALFAGLGTDYVPSG 252 (435)
Q Consensus 236 A~e-------A~~~GLv~~vv~~~ 252 (435)
.++ +...|++|.+++++
T Consensus 183 ~~~lgG~~~h~~~sG~~d~v~~de 206 (493)
T PF01039_consen 183 SEELGGADVHAAKSGVVDYVVDDE 206 (493)
T ss_dssp HHHHHBHHHHHHTSSSSSEEESSH
T ss_pred chhhhhhhhhcccCCCceEEEech
Confidence 554 24689999999865
No 141
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=95.92 E-value=0.047 Score=53.08 Aligned_cols=87 Identities=17% Similarity=0.164 Sum_probs=66.1
Q ss_pred HHHHHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCC
Q 013851 153 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKR 232 (435)
Q Consensus 153 l~~~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~ 232 (435)
-+..+..++.|+||.|=|---+||+--...+|.+.|.++++|+. +.|.++++..+..- +++.+. -..-.
T Consensus 180 nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsILWkD~----~ka~eA-Ae~mk 248 (317)
T COG0825 180 NLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASILWKDA----SKAKEA-AEAMK 248 (317)
T ss_pred HHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhhhhcCh----hhhHHH-HHHcC
Confidence 34467889999999999987777776666789999999999884 45666666555432 244443 33457
Q ss_pred CCcHHHHHHcCccceecCC
Q 013851 233 ISTPSDALFAGLGTDYVPS 251 (435)
Q Consensus 233 i~~A~eA~~~GLv~~vv~~ 251 (435)
|+ |++.+++||||.++|.
T Consensus 249 it-a~dLk~lgiID~II~E 266 (317)
T COG0825 249 IT-AHDLKELGIIDGIIPE 266 (317)
T ss_pred CC-HHHHHhCCCcceeccC
Confidence 98 9999999999999974
No 142
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=95.89 E-value=0.12 Score=55.82 Aligned_cols=109 Identities=12% Similarity=0.052 Sum_probs=69.0
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHH
Q 013851 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICK 156 (435)
Q Consensus 77 v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (435)
|+++.-+..=...+++....+.+.++++.+.+.. +-+|.|.-+| +++-.+ ....+.. ...+...+.....
T Consensus 131 V~v~a~D~tv~GGs~g~~~~~Ki~r~~elA~~~~-lPlV~l~DSg-Garl~~-q~e~~~~-------~~~~g~if~~~~~ 200 (569)
T PLN02820 131 CMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCR-LPCIYLVDSG-GANLPR-QAEVFPD-------RDHFGRIFYNQAR 200 (569)
T ss_pred EEEEEECCCccCCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCC-CcCCcc-cccccch-------HhHHHHHHHHHHH
Confidence 4444444333568899999999999999988764 4555555444 333211 0010100 0011122222334
Q ss_pred HhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCC-ceEe
Q 013851 157 ISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLA 195 (435)
Q Consensus 157 i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~-a~f~ 195 (435)
+.....|.|++|-|.|.|||+....+||++|++++ +.+.
T Consensus 201 ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~ 240 (569)
T PLN02820 201 MSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIF 240 (569)
T ss_pred HhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEE
Confidence 55567999999999999999999999999999875 4444
No 143
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=95.32 E-value=0.2 Score=53.43 Aligned_cols=102 Identities=16% Similarity=0.064 Sum_probs=63.2
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHH
Q 013851 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICK 156 (435)
Q Consensus 77 v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (435)
|+++..+-.=..-+++....+.+..+++.+.+..- -+|.|.-+| ++ .+.+-. ..+..+ ...+... .
T Consensus 84 v~v~a~D~t~~gGS~g~~~~~K~~r~~e~A~~~~l-PlV~l~dSg-Ga-----rm~eg~-----~~l~~~-~~~~~~~-~ 149 (512)
T TIGR01117 84 VYAFAQDFTVMGGSLGEMHAAKIVKIMDLAMKMGA-PVVGLNDSG-GA-----RIQEAV-----DALKGY-GDIFYRN-T 149 (512)
T ss_pred EEEEEECCcccccCCCHHHHHHHHHHHHHHHHcCC-CEEEEecCC-CC-----Cccccc-----hhhhhH-HHHHHHH-H
Confidence 44444443335678888899999999999887654 455554443 22 221110 001111 1111111 1
Q ss_pred HhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCc
Q 013851 157 ISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 192 (435)
Q Consensus 157 i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a 192 (435)
...-..|.|++|.|+|.||+......||++|+++++
T Consensus 150 ~~s~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~ 185 (512)
T TIGR01117 150 IASGVVPQISAIMGPCAGGAVYSPALTDFIYMVDNT 185 (512)
T ss_pred HHcCCCcEEEEEecCCCcHHHHHHHhcCceEEeccc
Confidence 123358999999999999998888899999999864
No 144
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=95.28 E-value=0.84 Score=44.26 Aligned_cols=146 Identities=18% Similarity=0.160 Sum_probs=93.5
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHH--HHHHHHH
Q 013851 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVF--TAEYSLI 154 (435)
Q Consensus 77 v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~--~~~~~l~ 154 (435)
|+...++-.=-.-+|..-.=+.+..+++.+-.+ .+..|+++.+|+ +-+.| ....+. ......+
T Consensus 124 vv~av~df~FmgGSmGsVvGeki~ra~E~A~e~-k~P~v~f~aSGG------ARMQE--------g~lSLMQMaktsaAl 188 (294)
T COG0777 124 VVLAVMDFAFMGGSMGSVVGEKITRAIERAIED-KLPLVLFSASGG------ARMQE--------GILSLMQMAKTSAAL 188 (294)
T ss_pred EEEEEEeccccccchhHHHHHHHHHHHHHHHHh-CCCEEEEecCcc------hhHhH--------HHHHHHHHHHHHHHH
Confidence 555555544345677888888899999888776 478999988872 11111 111111 1122345
Q ss_pred HHHhhCCCcEEEEECCccchhh-hhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhCCCchHHHHHHhhcCCCC
Q 013851 155 CKISEYKKPYISLMDGVTMGFG-IGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRI 233 (435)
Q Consensus 155 ~~i~~~~kPvIaavnG~a~GgG-~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~~a~~l~ltG~~i 233 (435)
.++.....|+|+.+..+.+||- +.+++..|+.||-++|.+|+... |.|-. ..++=+--| |
T Consensus 189 ~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGp---------------RVIEQ--Tire~LPeg--f 249 (294)
T COG0777 189 KRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGP---------------RVIEQ--TIREKLPEG--F 249 (294)
T ss_pred HHHHhcCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcc---------------hhhhh--hhcccCCcc--h
Confidence 5677889999999999999875 77888999998886655544322 22210 111111111 3
Q ss_pred CcHHHHHHcCccceecCCCChHH
Q 013851 234 STPSDALFAGLGTDYVPSGNLGS 256 (435)
Q Consensus 234 ~~A~eA~~~GLv~~vv~~~~l~~ 256 (435)
..++-.++.|+||.+|+..++..
T Consensus 250 Q~aEfLlehG~iD~iv~R~elr~ 272 (294)
T COG0777 250 QTAEFLLEHGMIDMIVHRDELRT 272 (294)
T ss_pred hhHHHHHHcCCceeeecHHHHHH
Confidence 33677889999999999877654
No 145
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=93.27 E-value=0.15 Score=52.71 Aligned_cols=68 Identities=12% Similarity=0.105 Sum_probs=53.0
Q ss_pred HHHHHHhccChhHHHHHHHHHHHHhhhcCCCCccCCCHHHHHHHHHHHHHHhCCCchHHHHHHHH---HhcCCCCCCCCC
Q 013851 332 EALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAV---LVDKDQNPKWNP 408 (435)
Q Consensus 332 ~~l~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~af---l~~K~r~P~w~~ 408 (435)
+.+++++..+|.+++.+|+.++... ..+...+..+...+..++.++|+.|++.+| + +| +.|.|--
T Consensus 228 ~~~~~i~~~~p~av~~~k~~~~~~~----------~~~~~~l~~~~~~i~~~f~~~d~~ei~~al~~~~-~k-r~~~wa~ 295 (401)
T PLN02157 228 EQLKKLLTDDPSVVESCLEKCAEVA----------HPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEA-GR-RKDTWCI 295 (401)
T ss_pred HHHHHHHcCCHHHHHHHHHHHhccc----------CCcchhHHHHHHHHHHHhcCCCHHHHHHHHHhhh-cc-cchHHHH
Confidence 4455788899999999999987542 235567777888888999999999999999 6 56 6788864
Q ss_pred CCc
Q 013851 409 ASL 411 (435)
Q Consensus 409 ~~~ 411 (435)
+.+
T Consensus 296 ~~~ 298 (401)
T PLN02157 296 TTL 298 (401)
T ss_pred HHH
Confidence 433
No 146
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=93.12 E-value=0.29 Score=51.80 Aligned_cols=101 Identities=12% Similarity=0.025 Sum_probs=66.9
Q ss_pred EEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHH
Q 013851 78 AVITLD-RPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICK 156 (435)
Q Consensus 78 ~~Itln-rp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (435)
..|..| -+-+.-++..-..+.+..+.+.+.++....+.+..|.| +.+.+-... . +.+...+.-..+
T Consensus 93 ~~v~a~D~TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l~dsgG-------ari~~~v~~-----l-~g~g~iF~~~a~ 159 (526)
T COG4799 93 VFVFANDFTVKGGTLGEMTAKKILRAQELAIENGLPVIGLNDSGG-------ARIQEGVPS-----L-AGYGRIFYRNAR 159 (526)
T ss_pred EEEEEecCceecccccccccchHHHHHHHHHHcCCCEEEEEcccc-------cccccCccc-----c-ccchHHHHHHHH
Confidence 333344 44567788888888888888888877655555555544 222221110 1 111222233334
Q ss_pred HhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCc
Q 013851 157 ISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 192 (435)
Q Consensus 157 i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a 192 (435)
+... .|.|++|-|.|.|||+.+-..||++|+.++.
T Consensus 160 ~Sg~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 160 ASGV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred hccC-CCEEEEEEecCcccccccccccceEEEEcCC
Confidence 4555 9999999999999999999999999999984
No 147
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=90.39 E-value=3.7 Score=44.49 Aligned_cols=146 Identities=12% Similarity=0.132 Sum_probs=93.0
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 89 Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
-+++.+-.+...+.++..+. -.+-+|.|.-.. .|..|.+-.. ........+++.++.....|.|++|
T Consensus 380 g~l~~~~a~Kaarfi~lc~~-~~iPlv~l~D~p--Gf~~G~~~E~----------~G~~~~~a~l~~A~a~~~VP~isvi 446 (569)
T PLN02820 380 GILFTESALKGAHFIELCAQ-RGIPLLFLQNIT--GFMVGSRSEA----------SGIAKAGAKMVMAVACAKVPKITII 446 (569)
T ss_pred CccCHHHHHHHHHHHHHHHh-cCCCEEEEEECC--CCCCCHHHHH----------hhHHHHHHHHHHHHHhCCCCEEEEE
Confidence 45888888888888887775 456666665542 3665544322 2244556678888999999999999
Q ss_pred CCccchhhhhhhh----cCCeEEEcCCceEecccccCCCCCChhHHHHHhhC-C------C----chHH-H-HH-H-hhc
Q 013851 169 DGVTMGFGIGISG----HGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-P------G----GGSV-G-AY-L-GMT 229 (435)
Q Consensus 169 nG~a~GgG~~Lal----acD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~-~------G----~~~~-a-~~-l-~lt 229 (435)
=|.++|+|..-.. ..|+++|. |...+|+.++-|+.-.+-+. + | .... + ++ + -..
T Consensus 447 ~g~a~G~g~~aM~g~~~~~d~~~aw-------p~A~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (569)
T PLN02820 447 VGGSFGAGNYGMCGRAYSPNFLFMW-------PNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVEAY 519 (569)
T ss_pred ECCcchHHHHHhcCcCCCCCEEEEC-------CCCeEEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHHHHHH
Confidence 9999998765554 34555554 66666777666666555431 1 1 0001 0 01 1 111
Q ss_pred CCCCCcHHHHHHcCccceecCCCChH
Q 013851 230 GKRISTPSDALFAGLGTDYVPSGNLG 255 (435)
Q Consensus 230 G~~i~~A~eA~~~GLv~~vv~~~~l~ 255 (435)
-+..+ +..|-..|+||.|+++.+.-
T Consensus 520 ~~~~~-p~~aa~~~~vD~VIdP~dTR 544 (569)
T PLN02820 520 EREAN-PYYSTARLWDDGVIDPADTR 544 (569)
T ss_pred HHhCC-HHHHHHcCCcCcccCHHHHH
Confidence 22345 77788999999999987653
No 148
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=83.74 E-value=6.4 Score=41.93 Aligned_cols=161 Identities=16% Similarity=0.176 Sum_probs=92.7
Q ss_pred CcEEEEEEcCCCCCC-CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHH
Q 013851 75 NGVAVITLDRPKALN-AMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSL 153 (435)
Q Consensus 75 ~~v~~Itlnrp~~~N-al~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l 153 (435)
|...-|.=|+|.... +++.+-.....+.+...+.. ++-+|.|.-. ..|..|-+-. ........-++
T Consensus 293 G~pVGiian~~~~~~G~~~~~~a~K~arfi~lcd~~-~iPlv~l~dt--pGf~~g~~~E----------~~g~~~~ga~~ 359 (493)
T PF01039_consen 293 GRPVGIIANNPRQRAGALDPDGARKAARFIRLCDAF-NIPLVTLVDT--PGFMPGPEAE----------RAGIIRAGARL 359 (493)
T ss_dssp TEEEEEEEE-TTCGGGEB-HHHHHHHHHHHHHHHHT-T--EEEEEEE--CEB--SHHHH----------HTTHHHHHHHH
T ss_pred CcceEEEEeccccccccCChHHHHHHHHHHHHHHhh-CCceEEEeec--ccccccchhh----------hcchHHHHHHH
Confidence 443444455664322 69999999999999888873 5667777654 2465443221 12344556678
Q ss_pred HHHHhhCCCcEEEEECCccchhhhhhhhcC----CeEEEcCCceEecccccCCCCCChhHHHHHhhC-C------Cc--h
Q 013851 154 ICKISEYKKPYISLMDGVTMGFGIGISGHG----RYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-P------GG--G 220 (435)
Q Consensus 154 ~~~i~~~~kPvIaavnG~a~GgG~~Lalac----D~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~-~------G~--~ 220 (435)
+.++..+..|.|..|-|.+.|||....... |+++|. |-..+|+.++-|+...+-+. . |. .
T Consensus 360 ~~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Aw-------p~a~~~vm~~e~a~~i~~~~~~~~~~~~~~~~~ 432 (493)
T PF01039_consen 360 LYALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAW-------PTAEIGVMGPEGAASILYRDELEAAEAEGADPE 432 (493)
T ss_dssp HHHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEE-------TT-EEESS-HHHHHHHHTHHHHHHSCHCCHSHH
T ss_pred HHHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhh-------hcceeeecChhhhheeeehhhhhhhhcccchhH
Confidence 889999999999999999999877444444 566554 55555666655554443221 0 00 0
Q ss_pred H-HHHHHhhcCCC-CCcHHHHHHcCccceecCCCChHH
Q 013851 221 S-VGAYLGMTGKR-ISTPSDALFAGLGTDYVPSGNLGS 256 (435)
Q Consensus 221 ~-~a~~l~ltG~~-i~~A~eA~~~GLv~~vv~~~~l~~ 256 (435)
. ....+--.-+. .+ +..+...|++|.++++.+.-.
T Consensus 433 ~~~~~~~~~~~~~~~~-~~~~a~~~~~D~ii~p~~tR~ 469 (493)
T PF01039_consen 433 AQRAEKIAEYEDELSS-PYRAASRGYVDDIIDPAETRK 469 (493)
T ss_dssp HHHHHHHHHHHHHHSS-HHHHHHTTSSSEESSGGGHHH
T ss_pred HHHHHHHHHHHHhcCC-HHHHHhcCCCCCccCHHHHHH
Confidence 0 01111111112 45 788999999999999887653
No 149
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=82.80 E-value=7.3 Score=37.56 Aligned_cols=132 Identities=17% Similarity=0.129 Sum_probs=73.6
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 89 Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
-.++.++-+.+...|-.++.++.-|-|.+.=..| |+++..- ...+..+..++-||=..+
T Consensus 99 ~~Idd~va~~viaqlL~Ld~ed~~K~I~lyINSP-----GG~vtag----------------lAIYDtMq~ik~~V~Tic 157 (275)
T KOG0840|consen 99 QPIDDDVANLVIAQLLYLDSEDPKKPIYLYINSP-----GGSVTAG----------------LAIYDTMQYIKPDVSTIC 157 (275)
T ss_pred CcCcHHHHHHHHHHHHHhhccCCCCCeEEEEeCC-----CCccchh----------------hhHHHHHHhhCCCceeee
Confidence 3478888888888888888766667666653322 3333111 112234445566665555
Q ss_pred CCccchhhhhhhhcCCeEEEcCCceEecccccCCCC-CChhHHHHHhhCCCchHHHHHH------------hhcCC----
Q 013851 169 DGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF-PDVGFSYIAAKGPGGGSVGAYL------------GMTGK---- 231 (435)
Q Consensus 169 nG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~-P~~g~~~~l~r~~G~~~~a~~l------------~ltG~---- 231 (435)
=|.|.+-|.-|..+ .+..-+|++|..++=+- |-+|..-.-..+. -.++|+ --||+
T Consensus 158 ~G~Aas~aalLLaa-----G~KG~R~alPnsriMIhQP~gga~Gqa~Di~---i~akE~~~~k~~l~~i~a~~Tgq~~e~ 229 (275)
T KOG0840|consen 158 VGLAASMAALLLAA-----GAKGKRYALPNSRIMIHQPSGGAGGQATDIV---IQAKELMRIKEYLNEIYAKHTGQPLEV 229 (275)
T ss_pred hhhHHhHHHHHHhc-----CCCcceeecCCceeEEeccCCCcCccchHHH---HHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 67776655544433 34566777777766553 3222110000000 011111 12444
Q ss_pred ---------CCCcHHHHHHcCccceecC
Q 013851 232 ---------RISTPSDALFAGLGTDYVP 250 (435)
Q Consensus 232 ---------~i~~A~eA~~~GLv~~vv~ 250 (435)
.++ |+||++.||+|.|+.
T Consensus 230 i~~d~dRd~fms-a~EA~eyGliD~v~~ 256 (275)
T KOG0840|consen 230 IEKDMDRDRFMS-AEEAKEYGLIDKVID 256 (275)
T ss_pred HHhhhcccccCC-HHHHHHhcchhhhhc
Confidence 478 999999999999986
No 150
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=80.53 E-value=4 Score=40.73 Aligned_cols=57 Identities=16% Similarity=0.131 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhcCC---CceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 94 DMDIKYKSFLDEWESDP---RVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 94 ~m~~eL~~al~~~~~d~---~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
.-..+|..+|+.++..+ .+-+|||.=+| +++- ||..| ....+.++|..+|.|||++|
T Consensus 55 ~A~~~I~~al~~~~~~~~~~~~Dviii~RGG-Gs~e---DL~~F--------------N~e~varai~~~~~PvisaI 114 (319)
T PF02601_consen 55 GAAASIVSALRKANEMGQADDFDVIIIIRGG-GSIE---DLWAF--------------NDEEVARAIAASPIPVISAI 114 (319)
T ss_pred chHHHHHHHHHHHHhccccccccEEEEecCC-CChH---Hhccc--------------ChHHHHHHHHhCCCCEEEec
Confidence 44788888999988765 57777763322 2221 22211 12357889999999999987
No 151
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=74.40 E-value=6.6 Score=40.88 Aligned_cols=56 Identities=14% Similarity=0.264 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 95 MDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 95 m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
--.+|.++++.++..+++.++|+ |.| |+-+.++-.. ..-.+.++|+.++.|||++|
T Consensus 177 A~~eIv~aI~~an~~~~~DvlIV-aRG------GGSiEDLW~F-----------NdE~vaRAi~~s~iPvISAV 232 (440)
T COG1570 177 AAEEIVEAIERANQRGDVDVLIV-ARG------GGSIEDLWAF-----------NDEIVARAIAASRIPVISAV 232 (440)
T ss_pred cHHHHHHHHHHhhccCCCCEEEE-ecC------cchHHHHhcc-----------ChHHHHHHHHhCCCCeEeec
Confidence 35677777777777777777766 333 2222222211 12357889999999999987
No 152
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=71.75 E-value=6.4 Score=41.23 Aligned_cols=59 Identities=12% Similarity=0.079 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 92 NLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 92 ~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
......++..+|+.++..+++.+|||. .|++++- ||..| ....+.++|+.||.|||++|
T Consensus 168 G~~a~~~i~~al~~~~~~~~~dviii~-RGGGs~e---DL~~F--------------n~e~~~rai~~~~~Pvis~i 226 (432)
T TIGR00237 168 GEGAVQSIVESIELANTKNECDVLIVG-RGGGSLE---DLWSF--------------NDEKVARAIFLSKIPIISAV 226 (432)
T ss_pred CccHHHHHHHHHHHhhcCCCCCEEEEe-cCCCCHH---Hhhhc--------------CcHHHHHHHHcCCCCEEEec
Confidence 345578888888888876667777763 3323221 22221 12357889999999999987
No 153
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=67.47 E-value=11 Score=39.46 Aligned_cols=57 Identities=11% Similarity=0.149 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013851 93 LDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM 168 (435)
Q Consensus 93 ~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav 168 (435)
..-..+|..+|+.++... +.+||| +.|++++- ||..| ....+.++|+.+|.|||++|
T Consensus 175 ~~A~~~i~~al~~~~~~~-~Dviii-~RGGGS~e---DL~~F--------------n~e~v~~ai~~~~~Pvis~I 231 (438)
T PRK00286 175 EGAAASIVAAIERANARG-EDVLIV-ARGGGSLE---DLWAF--------------NDEAVARAIAASRIPVISAV 231 (438)
T ss_pred ccHHHHHHHHHHHhcCCC-CCEEEE-ecCCCCHH---Hhhcc--------------CcHHHHHHHHcCCCCEEEec
Confidence 345788888888887643 556655 33322221 22222 12357889999999999987
No 154
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=67.20 E-value=13 Score=32.56 Aligned_cols=52 Identities=17% Similarity=0.254 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCcc
Q 013851 98 KYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVT 172 (435)
Q Consensus 98 eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a 172 (435)
.+.+.++.+.+||++++|++.-.+-+ + + +.+.+..++.... ||||+..-|..
T Consensus 41 ~~~d~l~~~~~D~~t~~I~ly~E~~~------------d---~-------~~f~~~~~~a~~~-KPVv~lk~Grt 92 (138)
T PF13607_consen 41 DFADLLEYLAEDPDTRVIVLYLEGIG------------D---G-------RRFLEAARRAARR-KPVVVLKAGRT 92 (138)
T ss_dssp -HHHHHHHHCT-SS--EEEEEES--S----------------H-------HHHHHHHHHHCCC-S-EEEEE----
T ss_pred CHHHHHHHHhcCCCCCEEEEEccCCC------------C---H-------HHHHHHHHHHhcC-CCEEEEeCCCc
Confidence 46678889999999999999987510 1 1 1222344445555 99999998873
No 155
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=66.45 E-value=16 Score=35.81 Aligned_cols=52 Identities=23% Similarity=0.379 Sum_probs=34.2
Q ss_pred HHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccc
Q 013851 100 KSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTM 173 (435)
Q Consensus 100 ~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~ 173 (435)
.++|+.+++||..++||+-|.=+ .+- .+...++. .. ...+||||+.+-|.+.
T Consensus 189 id~L~~fe~Dp~T~~ivmiGEiG------G~a--------Ee~AA~~i-------~~-~~~~KPVVa~iaG~ta 240 (293)
T COG0074 189 IDALEMFEADPETEAIVMIGEIG------GPA--------EEEAAEYI-------KA-NATRKPVVAYIAGRTA 240 (293)
T ss_pred HHHHHHHhcCccccEEEEEecCC------CcH--------HHHHHHHH-------HH-hccCCCEEEEEeccCC
Confidence 36788999999999999999821 111 12222222 22 2345999999999864
No 156
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=62.35 E-value=60 Score=34.80 Aligned_cols=160 Identities=16% Similarity=0.157 Sum_probs=98.3
Q ss_pred EEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHH
Q 013851 77 VAVITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLIC 155 (435)
Q Consensus 77 v~~Itlnrp~-~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~ 155 (435)
|++| =|.|. ..-+|+.+--..-.+.+ ++.+-..+-.|.|.-. ..|.-|-|-.. ....+...+++.
T Consensus 326 VGiI-ANqp~~~~G~l~~~sa~KaArFI-~~cd~~~iPlv~L~d~--pGFm~G~~~E~----------~giik~Gakl~~ 391 (526)
T COG4799 326 VGII-ANQPRHLGGVLDIDSADKAARFI-RLCDAFNIPLVFLVDT--PGFMPGTDQEY----------GGIIKHGAKLLY 391 (526)
T ss_pred EEEE-ecCccccccccchHHHHHHHHHH-HhhhccCCCeEEEeCC--CCCCCChhHHh----------ChHHHhhhHHHh
Confidence 4444 45554 55689999998888888 5555556777777654 46888865532 234556668899
Q ss_pred HHhhCCCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhh-CCC-ch--HHHHH-----H
Q 013851 156 KISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAK-GPG-GG--SVGAY-----L 226 (435)
Q Consensus 156 ~i~~~~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r-~~G-~~--~~a~~-----l 226 (435)
++.....|.|..|-|-+.|||...+..-.+ ..+-.|+.|..++|+.-+-|+.-.+-+ .+. .. ..-.. +
T Consensus 392 A~aeatVPkitvI~rkayGga~~~M~~~~~---~~~~~~AwP~a~iaVMG~egAv~i~~~k~l~~~~~~~~~~~~~~~~~ 468 (526)
T COG4799 392 AVAEATVPKITVITRKAYGGAYYVMGGKAL---GPDFNYAWPTAEIAVMGPEGAVSILYRKELAAAERPEEREALLRKQL 468 (526)
T ss_pred hHhhccCCeEEEEecccccceeeeecCccC---CCceeEecCcceeeecCHHHHHHHHHHHHhhcccCchhHHHHHHHHH
Confidence 999999999999999999998654433222 245566667777776544444443332 111 00 00000 0
Q ss_pred h--hcCCCCCcHHHHHHcCccceecCCCCh
Q 013851 227 G--MTGKRISTPSDALFAGLGTDYVPSGNL 254 (435)
Q Consensus 227 ~--ltG~~i~~A~eA~~~GLv~~vv~~~~l 254 (435)
. ..-+-.. +.-|.+.|++|.++++.+.
T Consensus 469 ~~eY~~~~~~-p~~aa~r~~iD~vI~p~~t 497 (526)
T COG4799 469 IAEYEEQFSN-PYYAAERGYIDAVIDPADT 497 (526)
T ss_pred HHHHHHhccc-hHHHHHhCCCCcccCHHHH
Confidence 0 0111123 4557778999999887554
No 157
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=61.06 E-value=21 Score=35.82 Aligned_cols=52 Identities=23% Similarity=0.382 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCcc
Q 013851 99 YKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVT 172 (435)
Q Consensus 99 L~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a 172 (435)
+.+.|+.+.+||++++|++.+.+.+ +- ..+..+|... ....||||+.+-|..
T Consensus 212 ~~D~L~~~~~Dp~T~~Ivl~~E~gG------~~--------e~~aa~fi~~--------~~~~KPVVa~~aGrs 263 (317)
T PTZ00187 212 FIDCLKLFLNDPETEGIILIGEIGG------TA--------EEEAAEWIKN--------NPIKKPVVSFIAGIT 263 (317)
T ss_pred HHHHHHHHhhCCCccEEEEEEecCC------ch--------hHHHHHHHHh--------hcCCCcEEEEEecCC
Confidence 5577888888999999999998511 00 1112222221 236899999998875
No 158
>PLN02522 ATP citrate (pro-S)-lyase
Probab=53.61 E-value=35 Score=37.30 Aligned_cols=52 Identities=17% Similarity=0.383 Sum_probs=34.8
Q ss_pred HHHHHHHHhcCCCceEEEEEeC-CCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccc
Q 013851 99 YKSFLDEWESDPRVKCVLIEGS-GPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTM 173 (435)
Q Consensus 99 L~~al~~~~~d~~vr~vVl~g~-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~ 173 (435)
+.+.|+.+.+||++++|++.+. |.+ | ..++. +..... ...||||+.+-|.+-
T Consensus 210 ~~D~L~~~~~Dp~Tk~IvlygEiGg~------~---------e~~f~-------ea~~~a-~~~KPVVa~kaGrsa 262 (608)
T PLN02522 210 LSDHVLRFNNIPQIKMIVVLGELGGR------D---------EYSLV-------EALKQG-KVSKPVVAWVSGTCA 262 (608)
T ss_pred HHHHHHHHhcCCCCCEEEEEEecCch------h---------HHHHH-------HHHHHh-cCCCCEEEEeccCCC
Confidence 4667888899999999999998 621 0 11111 112222 268999999999876
No 159
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=52.69 E-value=1.2e+02 Score=31.79 Aligned_cols=151 Identities=13% Similarity=0.091 Sum_probs=94.7
Q ss_pred EEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHH
Q 013851 79 VITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKI 157 (435)
Q Consensus 79 ~Itlnrp~-~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i 157 (435)
=|.-|+|+ ..-.|..+.-....+.++...+ ..+-.|.|...+ + |--|.+..... .......++.+.
T Consensus 352 gIvgnn~kf~~G~L~s~sa~KgarfIe~c~q-~~IPLi~l~ni~-G-fm~g~~~e~~g----------IaK~gAklv~a~ 418 (536)
T KOG0540|consen 352 GIVGNNPKFAGGVLFSESAVKGARFIELCDQ-RNIPLIFLQNIT-G-FMVGRAAEAGG----------IAKHGAKLVYAV 418 (536)
T ss_pred EEeccCchhcccccchhhhhhhHHHHHHHHh-cCCcEEEEEccC-C-ccccchhhhhc----------hhhhhhhhhhhh
Confidence 34556665 3466777777777776665554 457777777765 3 88887775432 223344677778
Q ss_pred hhCCCcEEEEECCccchhhhh---hhhcCCeEEEcCCceEecccccCCCCCChhHHHHHhhC-----CCchHHHHHHhhc
Q 013851 158 SEYKKPYISLMDGVTMGFGIG---ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-----PGGGSVGAYLGMT 229 (435)
Q Consensus 158 ~~~~kPvIaavnG~a~GgG~~---LalacD~ria~e~a~f~~pe~~~Gl~P~~g~~~~l~r~-----~G~~~~a~~l~lt 229 (435)
.....|-|..+-|.+.||-.. -++.-|+.+|-++|.++.-.. .++.-.+.+. +...+...+..
T Consensus 419 a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~IavmG~-------~~a~~Vi~q~~~e~a~~~~~~~~E~f-- 489 (536)
T KOG0540|consen 419 ACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIAVMGG-------KQAANVIFQITLEKAVALKAPYIEKF-- 489 (536)
T ss_pred hhccCceEEEEecCccCCcccccccccCCceeEEcccceeeeccc-------cchhhhhhhhhhhhhhhhcchHHHHh--
Confidence 888899999999999996544 456677777777666664332 1222222221 11111233333
Q ss_pred CCCCCcHHHHHHcCccceecCCCChH
Q 013851 230 GKRISTPSDALFAGLGTDYVPSGNLG 255 (435)
Q Consensus 230 G~~i~~A~eA~~~GLv~~vv~~~~l~ 255 (435)
|.++. |...|++|.++|+.+..
T Consensus 490 ~npy~----a~~Rg~~D~II~p~~tR 511 (536)
T KOG0540|consen 490 GNPYY----AAARGWDDGIIDPSDTR 511 (536)
T ss_pred cCccH----HHHhhccccccChhHhh
Confidence 77776 56779999999987654
No 160
>smart00250 PLEC Plectin repeat.
Probab=39.74 E-value=23 Score=23.50 Aligned_cols=18 Identities=39% Similarity=0.508 Sum_probs=16.7
Q ss_pred cCCCCCcHHHHHHcCccce
Q 013851 229 TGKRISTPSDALFAGLGTD 247 (435)
Q Consensus 229 tG~~i~~A~eA~~~GLv~~ 247 (435)
||++++ -.||++.||+|.
T Consensus 18 t~~~ls-v~eA~~~glid~ 35 (38)
T smart00250 18 TGQKLS-VEEALRRGLIDP 35 (38)
T ss_pred CCCCcC-HHHHHHcCCCCc
Confidence 899999 999999999985
No 161
>COG0793 Prc Periplasmic protease [Cell envelope biogenesis, outer membrane]
Probab=35.86 E-value=31 Score=35.81 Aligned_cols=94 Identities=12% Similarity=0.141 Sum_probs=59.2
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCccccCCCchhhhhhh-----c---hhHHHHH
Q 013851 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGGDVKEISTQN-----Q---LSEMIEV 146 (435)
Q Consensus 77 v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl--~g~g~~~F~aG~Dl~~~~~~~-----~---~~~~~~~ 146 (435)
|++|+| +.|+.....+|..++..++++. ++++|| ++.+++......++..+.-.. . ......+
T Consensus 205 IGyI~I------~~F~~~~~~~~~~al~~L~~~~-~~GlIlDLR~N~GG~L~~av~i~~~f~~~g~iv~~~~r~g~~~~~ 277 (406)
T COG0793 205 IGYIRI------PSFGEGTYEDLEKALDELKKQG-AKGLILDLRNNPGGLLSQAVKLAGLFLPSGPIVSTRGRNGKVNVY 277 (406)
T ss_pred EEEEEe------cccccchHHHHHHHHHHHHhcC-CcEEEEEeCCCCCccHHHHHHHHHcccCCCcEEEEecCCCceeec
Confidence 888888 4567777888999999999886 898887 566555666666665443311 0 0000000
Q ss_pred HHHHHHHHHHHhhCCCcEEEEECCccchhhhhhhhc
Q 013851 147 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGH 182 (435)
Q Consensus 147 ~~~~~~l~~~i~~~~kPvIaavnG~a~GgG~~Lala 182 (435)
+.. ..-...++|+|..||+....++=.++.+
T Consensus 278 ~~~-----~~~~~~~~PlvvLvn~~SASAsEI~aga 308 (406)
T COG0793 278 FSA-----SGEALYDGPLVVLVNEGSASASEIFAGA 308 (406)
T ss_pred ccc-----ccccCCCCCEEEEECCCCccHHHHHHHH
Confidence 000 0001458999999999988777555554
No 162
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=35.67 E-value=32 Score=36.17 Aligned_cols=84 Identities=19% Similarity=0.225 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHHhhCCCcEEEEECCccchhh
Q 013851 97 IKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFG 176 (435)
Q Consensus 97 ~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaavnG~a~GgG 176 (435)
-.+.+.|+.+.+||.+++|++...+ + .+ ..+ +.+..++... .||||+..-|..- .|
T Consensus 189 ~~~~d~l~~l~~D~~t~~I~ly~E~---~---------~~------~~~----f~~aa~~a~~-~KPVv~~k~Grs~-~g 244 (447)
T TIGR02717 189 IDESDLLEYLADDPDTKVILLYLEG---I---------KD------GRK----FLKTAREISK-KKPIVVLKSGTSE-AG 244 (447)
T ss_pred CCHHHHHHHHhhCCCCCEEEEEecC---C---------CC------HHH----HHHHHHHHcC-CCCEEEEecCCCh-hh
Confidence 3567888999999999999999875 1 01 011 2233334444 8999999999864 34
Q ss_pred hhhhhcCCeEEEcCCceEecccccCCCC
Q 013851 177 IGISGHGRYRIVTEKTLLAMPENGIGLF 204 (435)
Q Consensus 177 ~~LalacD~ria~e~a~f~~pe~~~Gl~ 204 (435)
...+...-=-++.++..|.--.-+.|++
T Consensus 245 ~~aa~sHtgalag~~~~~~a~~~~~Gv~ 272 (447)
T TIGR02717 245 AKAASSHTGALAGSDEAYDAAFKQAGVI 272 (447)
T ss_pred hhhhhhccccccChHHHHHHHHHHCCeE
Confidence 4333332223344444444444455553
No 163
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=30.82 E-value=1e+02 Score=30.75 Aligned_cols=24 Identities=17% Similarity=0.486 Sum_probs=17.6
Q ss_pred HHHHHHHHHhcCCCceEEEEEeCC
Q 013851 98 KYKSFLDEWESDPRVKCVLIEGSG 121 (435)
Q Consensus 98 eL~~al~~~~~d~~vr~vVl~g~g 121 (435)
++.+.|+.+.+||++++|+|...+
T Consensus 192 ~~~d~L~yl~~Dp~T~~I~ly~E~ 215 (300)
T PLN00125 192 NFVDCLEKFVKDPQTEGIILIGEI 215 (300)
T ss_pred CHHHHHHHHhhCCCCcEEEEEecc
Confidence 345667777788888888888774
No 164
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=30.04 E-value=1e+02 Score=27.53 Aligned_cols=57 Identities=26% Similarity=0.335 Sum_probs=35.0
Q ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHHHH-----hhCCCcEEEEECCcc
Q 013851 98 KYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLICKI-----SEYKKPYISLMDGVT 172 (435)
Q Consensus 98 eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i-----~~~~kPvIaavnG~a 172 (435)
...++|..+.+||++++|+|-+.++-.=| .+.... ++..+ ...++|+|+.|-|-.
T Consensus 60 ~~~~~l~~~~~Dp~v~vIlvd~~~G~g~~-------------~~~A~~-------l~~a~~~~~~~~~~~pvVa~v~GT~ 119 (153)
T PF00549_consen 60 TRNEALEIEAADPEVKVILVDIVGGIGSC-------------EDPAAG-------LIPAIKEAKAEGRKKPVVARVCGTN 119 (153)
T ss_dssp HHHHHHHHHHTSTTESEEEEEEESSSSSH-------------HHHHHH-------HHHHHSHCTHTTT-SEEEEEEESTT
T ss_pred HHHHHHHHHhcCCCccEEEEEeccccCch-------------HHHHHH-------HHHHHHhccccCCCCcEEEEeeeec
Confidence 34567788888999999999887621111 011111 22222 246799999999976
Q ss_pred ch
Q 013851 173 MG 174 (435)
Q Consensus 173 ~G 174 (435)
--
T Consensus 120 ~d 121 (153)
T PF00549_consen 120 AD 121 (153)
T ss_dssp CH
T ss_pred CC
Confidence 54
No 165
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=28.99 E-value=1e+02 Score=30.52 Aligned_cols=24 Identities=21% Similarity=0.555 Sum_probs=19.2
Q ss_pred HHHHHHHHHhcCCCceEEEEEeCC
Q 013851 98 KYKSFLDEWESDPRVKCVLIEGSG 121 (435)
Q Consensus 98 eL~~al~~~~~d~~vr~vVl~g~g 121 (435)
++.+.|+.+.+||.+++|++...+
T Consensus 187 ~~~D~l~~l~~Dp~T~~I~lylE~ 210 (291)
T PRK05678 187 NFIDVLEAFEEDPETEAIVMIGEI 210 (291)
T ss_pred CHHHHHHHHhhCCCCcEEEEEEec
Confidence 455677888889999999998874
No 166
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=28.72 E-value=1e+02 Score=30.52 Aligned_cols=24 Identities=21% Similarity=0.544 Sum_probs=19.4
Q ss_pred HHHHHHHHHhcCCCceEEEEEeCC
Q 013851 98 KYKSFLDEWESDPRVKCVLIEGSG 121 (435)
Q Consensus 98 eL~~al~~~~~d~~vr~vVl~g~g 121 (435)
++.+.|+.+.+||++++|++...+
T Consensus 185 ~~~D~l~~l~~Dp~T~~I~lylE~ 208 (286)
T TIGR01019 185 SFIDVLEAFEKDPETEAIVMIGEI 208 (286)
T ss_pred CHHHHHHHHhhCCCCcEEEEEEec
Confidence 456677888889999999998874
No 167
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=26.74 E-value=24 Score=24.40 Aligned_cols=20 Identities=35% Similarity=0.416 Sum_probs=16.4
Q ss_pred hcCCCCCcHHHHHHcCcccee
Q 013851 228 MTGKRISTPSDALFAGLGTDY 248 (435)
Q Consensus 228 ltG~~i~~A~eA~~~GLv~~v 248 (435)
-||++++ -++|++.||+|.-
T Consensus 17 ~tg~~ls-v~~A~~~glId~~ 36 (45)
T PF00681_consen 17 ETGERLS-VEEAIQRGLIDSD 36 (45)
T ss_dssp TTTEEEE-HHHHHHTTSS-HH
T ss_pred CCCeEEc-HHHHHHCCCcCHH
Confidence 4789999 9999999999753
No 168
>PRK06091 membrane protein FdrA; Validated
Probab=26.47 E-value=1.8e+02 Score=31.59 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=21.1
Q ss_pred CCchHHHHHHHHHhcCCCCCCCCCCCcCCCCHHHHH
Q 013851 385 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVE 420 (435)
Q Consensus 385 ~s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~ 420 (435)
.-+.|.+.++++=+. .-..+|+|.--.+++-..+-
T Consensus 517 Gl~~f~~~l~~~g~~-vv~~~W~Ppa~g~~~l~~~l 551 (555)
T PRK06091 517 GLRSFALDLQSAGKP-VVHYQWAPVAGGNKKLARLL 551 (555)
T ss_pred ChHHHHHHHHHcCCC-eEeecCcCCCCCCHHHHHHH
Confidence 345667776666532 23457999887766554443
No 169
>COG4565 CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
Probab=26.31 E-value=4e+02 Score=25.35 Aligned_cols=57 Identities=18% Similarity=0.095 Sum_probs=35.1
Q ss_pred CCChhHHHHHhhCCCchHHHHHHh-hcC-CCCCcHHHHHHcCccceecCCCChHHHHHHH
Q 013851 204 FPDVGFSYIAAKGPGGGSVGAYLG-MTG-KRISTPSDALFAGLGTDYVPSGNLGSLKEAL 261 (435)
Q Consensus 204 ~P~~g~~~~l~r~~G~~~~a~~l~-ltG-~~i~~A~eA~~~GLv~~vv~~~~l~~~~~~l 261 (435)
.|++-|..+|+.+.... ..-+.+ .|. .-+.+-++|++.|.+|.++.|=.++.+.++|
T Consensus 56 mPd~~Gi~lL~~ir~~~-~~~DVI~iTAA~d~~tI~~alr~Gv~DYLiKPf~~eRl~~aL 114 (224)
T COG4565 56 MPDGNGIELLPELRSQH-YPVDVIVITAASDMETIKEALRYGVVDYLIKPFTFERLQQAL 114 (224)
T ss_pred cCCCccHHHHHHHHhcC-CCCCEEEEeccchHHHHHHHHhcCchhheecceeHHHHHHHH
Confidence 57777777776654332 222322 222 2233357999999999999886666555554
No 170
>PLN00049 carboxyl-terminal processing protease; Provisional
Probab=24.27 E-value=24 Score=36.39 Aligned_cols=101 Identities=13% Similarity=0.142 Sum_probs=54.1
Q ss_pred CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCccccCCCchhhhhhhchhHHHHHHHHHHH
Q 013851 75 NGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYS 152 (435)
Q Consensus 75 ~~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl--~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 152 (435)
++|++|.++ .++.....++.++|+.+... .++.+|| ++.+++.+..+.++..+.-....-...........
T Consensus 194 ~~IgYi~i~------~F~~~~~~~~~~~l~~l~~~-~~~glIlDLR~N~GG~~~~a~~ia~~f~~~~~~~~~~~~~~~~~ 266 (389)
T PLN00049 194 PKIGYIKLT------TFNQNASSAVKEAIETLRAN-GVDAFVLDLRDNSGGLFPAGIEIAKLWLDKGVIVYIADSRGVRD 266 (389)
T ss_pred CCEEEEEec------cccchhHHHHHHHHHHHHHC-CCCEEEEEcCCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCcee
Confidence 478999884 45556778899999998765 4788887 45443343333333222211000000000000000
Q ss_pred HHH---H-HhhCCCcEEEEECCccchhhhhhhhc
Q 013851 153 LIC---K-ISEYKKPYISLMDGVTMGFGIGISGH 182 (435)
Q Consensus 153 l~~---~-i~~~~kPvIaavnG~a~GgG~~Lala 182 (435)
.+. . .....+|++..+|+.+..++=.++.+
T Consensus 267 ~~~~~~~~~~~~~~PvvVLvn~~TaSasEi~a~a 300 (389)
T PLN00049 267 IYDADGSSAIATSEPLAVLVNKGTASASEILAGA 300 (389)
T ss_pred EEecCCCccccCCCCEEEEECCCCccHHHHHHHH
Confidence 000 0 11246899999999998877666554
No 171
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=24.08 E-value=7.2e+02 Score=24.71 Aligned_cols=131 Identities=14% Similarity=0.132 Sum_probs=69.3
Q ss_pred cccccEEEEEecCcE--EEEEEcCCCCCCCCCHHHHHHHHHHH-HHHhcCCCceEEEEEeCCCCccccCCC-chhhhhhh
Q 013851 63 GAEEFVKGNVHPNGV--AVITLDRPKALNAMNLDMDIKYKSFL-DEWESDPRVKCVLIEGSGPRAFCAGGD-VKEISTQN 138 (435)
Q Consensus 63 ~~~~~i~~~~~~~~v--~~Itlnrp~~~Nal~~~m~~eL~~al-~~~~~d~~vr~vVl~g~g~~~F~aG~D-l~~~~~~~ 138 (435)
..++.+.+-.+ |++ .-=.|.-+...|.++++-+.+-...+ ..+...+.-++.||-|...+.|-=+-+ ...+....
T Consensus 96 ~~FDlvi~p~H-D~~~~~~Nvl~t~ga~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l 174 (311)
T PF06258_consen 96 RPFDLVIVPEH-DRLPRGPNVLPTLGAPNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQL 174 (311)
T ss_pred cccCEEEECcc-cCcCCCCceEecccCCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHH
Confidence 34666766542 333 11112223346999999888876665 456666777888777754455543332 11111110
Q ss_pred chhHHHHHHH-------------HHHHHHHHHhhC--CCcEEEEECCccchhhhhhhhcCCeEEEcCCceEecccc
Q 013851 139 QLSEMIEVFT-------------AEYSLICKISEY--KKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 199 (435)
Q Consensus 139 ~~~~~~~~~~-------------~~~~l~~~i~~~--~kPvIaavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 199 (435)
..... .-......|... +.|-+-..+|.--+-=.++...||.+++|+|+.=.+.|.
T Consensus 175 -----~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA 245 (311)
T PF06258_consen 175 -----AALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEA 245 (311)
T ss_pred -----HHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHH
Confidence 00000 000111222211 234444457666666788899999999999876555553
No 172
>KOG1255 consensus Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=23.50 E-value=1.8e+02 Score=28.15 Aligned_cols=71 Identities=20% Similarity=0.317 Sum_probs=42.0
Q ss_pred cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHHHHHHHHHHHHH
Q 013851 76 GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMIEVFTAEYSLIC 155 (435)
Q Consensus 76 ~v~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~ 155 (435)
.-..|-+-..+ .|--| +.++|+.+-.|+..+.+||-|.-++ ...++..+|....
T Consensus 203 QslcvGiGGDp-FnGT~------FID~L~vFl~D~~t~GIiliGEIGG--------------~AEe~AA~flk~~----- 256 (329)
T KOG1255|consen 203 QSLCVGIGGDP-FNGTN------FIDCLEVFLEDPETEGIILIGEIGG--------------SAEEEAAEFLKEY----- 256 (329)
T ss_pred ceeEEeecCCC-CCCcc------HHHHHHHHhcCcccceEEEEeccCC--------------hhhHHHHHHHHHh-----
Confidence 34445554433 45443 4567777888999999999997311 1122233333321
Q ss_pred HHhhCCCcEEEEECCcc
Q 013851 156 KISEYKKPYISLMDGVT 172 (435)
Q Consensus 156 ~i~~~~kPvIaavnG~a 172 (435)
.-..-+||||+.+.|..
T Consensus 257 nSg~~~kPVvsFIAG~t 273 (329)
T KOG1255|consen 257 NSGSTAKPVVSFIAGVT 273 (329)
T ss_pred ccCCCCCceeEEeeccc
Confidence 12346899999998764
No 173
>PF03464 eRF1_2: eRF1 domain 2; InterPro: IPR005141 This domain is found in the release factor eRF1 which terminates protein biosynthesis by recognizing stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known []. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site []. This domain is also found in other proteins which may also be involved in translation termination ; PDB: 3AGK_A 2VGN_A 2VGM_A 3J16_A 3IZQ 3IR9_A 3OBW_A 3MCA_B 2QI2_A 3E1Y_D ....
Probab=22.42 E-value=1.4e+02 Score=25.55 Aligned_cols=45 Identities=20% Similarity=0.289 Sum_probs=32.2
Q ss_pred EEEEEEcCCCCCCCC--C----------HHHHHHHHHHHHHH--hcCCCceEEEEEeCC
Q 013851 77 VAVITLDRPKALNAM--N----------LDMDIKYKSFLDEW--ESDPRVKCVLIEGSG 121 (435)
Q Consensus 77 v~~Itlnrp~~~Nal--~----------~~m~~eL~~al~~~--~~d~~vr~vVl~g~g 121 (435)
+..|+.+-|.|...= + ...+.++.+.+... -+.+.+++|||.|.|
T Consensus 25 ~~~i~~~ip~K~~~Gg~s~~rf~r~~~~~~f~~~i~~~l~~~f~~~~~~~~~iIiaGPG 83 (133)
T PF03464_consen 25 LQRIESNIPGKHKKGGQSQRRFEREKALEKFFKEIAEALKKYFLVNFDDVKCIIIAGPG 83 (133)
T ss_dssp EEEEE-GHCCCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHTTTCSEEEEEEST
T ss_pred EEEEEecCCCccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccEEEEECCH
Confidence 567788888886542 1 35677777777776 566789999999987
No 174
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=20.81 E-value=6.7e+02 Score=24.80 Aligned_cols=114 Identities=10% Similarity=0.090 Sum_probs=65.2
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCccccCCCchhhhhhhchhHHH----H----HHHH
Q 013851 78 AVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGGDVKEISTQNQLSEMI----E----VFTA 149 (435)
Q Consensus 78 ~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~----~----~~~~ 149 (435)
-++.+|.. .|-+|...+....+++...-..+.-++-||-|...+.|.=--|........-...+. . +.++
T Consensus 130 Nilpi~Gs--~h~Vt~~~lAa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR 207 (329)
T COG3660 130 NILPINGS--PHNVTSQRLAALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR 207 (329)
T ss_pred ceeeccCC--CCcccHHHhhhhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 45677765 478899999999999988866667777777777667775433332211100000000 0 0000
Q ss_pred HHHHHH-HHh-hCCCcEEEEECCccch--hhhhhhhcCCeEEEcCCce
Q 013851 150 EYSLIC-KIS-EYKKPYISLMDGVTMG--FGIGISGHGRYRIVTEKTL 193 (435)
Q Consensus 150 ~~~l~~-~i~-~~~kPvIaavnG~a~G--gG~~LalacD~ria~e~a~ 193 (435)
--+... .|. +++--.+...|+--.| --..+..++|++|+|+|+.
T Consensus 208 Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSi 255 (329)
T COG3660 208 TPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSI 255 (329)
T ss_pred CcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecchh
Confidence 001111 122 2555567777877333 4467777899999988753
No 175
>smart00870 Asparaginase Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The enzyme is effective in the treatment of human malignant lymphomas, which have a diminished capacity to produce asparagine synthetase: in order to survive, such cells absorb asparagine from blood plasma PUBMED:2407723, PUBMED:3379033 - if Asn levels have been depleted by injection of asparaginase, the lymphoma cells die.
Probab=20.15 E-value=3.3e+02 Score=27.25 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=23.3
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEe
Q 013851 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEG 119 (435)
Q Consensus 89 Nal~~~m~~eL~~al~~~~~d~~vr~vVl~g 119 (435)
--|+++.+.+|.+.+++.-+++++.++|+|-
T Consensus 55 s~~t~~~w~~la~~i~~~~~~~~~dG~VVtH 85 (323)
T smart00870 55 SNMTPADWLKLAKRINEALADDGYDGVVVTH 85 (323)
T ss_pred ccCCHHHHHHHHHHHHHHhccCCCCEEEEec
Confidence 4589999999999998865556666666654
Done!