BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013853
(435 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255588981|ref|XP_002534787.1| Protein sufD, putative [Ricinus communis]
gi|223524572|gb|EEF27596.1| Protein sufD, putative [Ricinus communis]
Length = 484
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/488 (63%), Positives = 355/488 (72%), Gaps = 69/488 (14%)
Query: 1 MSALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQ-TTFP--QATFSDPFVIQLAESLE 57
MSAL F P ++ +L PK + +K++ SL TT P QA FSDPFV+QLAE+LE
Sbjct: 1 MSALVFVPPVYTFTRITTRLKPKPK---HKVKTSLSLTTTPVIQAGFSDPFVLQLAETLE 57
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP- 116
DSL S S LQKLRDS S++LLSTPWPSR+DEPFRFTDTS+IK SQI PI++P
Sbjct: 58 DSLSPSPS-------LQKLRDSCSESLLSTPWPSRRDEPFRFTDTSLIKQSQIHPISKPP 110
Query: 117 --SSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG-VSDGIMKRVSDFIS 173
D+S DAQ P++V++DGFI NS N N PDGV+VGS+L D I K VS +
Sbjct: 111 PIDHLTDISKDAQLPNIVIVDGFILNSMSNSLNFPDGVFVGSMLNDPEDKIAKLVSKYFD 170
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPA---------------------------------- 199
+FQ GDLFWSING+GAPD+ VIYVPA
Sbjct: 171 DFQWGDLFWSINGLGAPDVAVIYVPAGVRVENPIHLRYVSVEGGEEGSNKLPVSNPRVLV 230
Query: 200 ------------------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 241
G+ CYWANSVLEV+I +G KV+HSY+Q+QSLN+AHIKWTAV
Sbjct: 231 VVEEGGEVGIIEEFVSIGSGDKCYWANSVLEVMIEEGAKVKHSYIQSQSLNSAHIKWTAV 290
Query: 242 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 301
+Q+++S YELVEVSTGGKLSRHN+HVQQLGPDT TELS+FHL VS QTQDLHSRL+LDHP
Sbjct: 291 QQKSSSTYELVEVSTGGKLSRHNLHVQQLGPDTSTELSTFHLCVSSQTQDLHSRLVLDHP 350
Query: 302 RGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 361
R Y RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII
Sbjct: 351 RAYSRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 410
Query: 362 ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVI+R P+ IR QV
Sbjct: 411 ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIDRCPFSFIRKQVER 470
Query: 422 HVKNLMGT 429
VK L+ +
Sbjct: 471 QVKELLSS 478
>gi|225427242|ref|XP_002278544.1| PREDICTED: protein ABCI7, chloroplastic-like [Vitis vinifera]
Length = 495
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/492 (63%), Positives = 364/492 (73%), Gaps = 79/492 (16%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR A FSDPFV+
Sbjct: 16 MAATLLSPHLLLN----PKLSIQNSASKFPTPKSRSTP-KIR---------AAFSDPFVL 61
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 62 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 119
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I K+VS
Sbjct: 120 TPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVS 179
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPA---------------EGND----------- 203
+F++ F+ GDLFWS+NG+G PD+ V+YVPA EG D
Sbjct: 180 EFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNP 238
Query: 204 -------------------------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 238
CYWAN+V EVVIG+G KV+HSY+Q+QSL+AAHIKW
Sbjct: 239 RVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKW 298
Query: 239 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 298
T+V+Q ++S YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL V DQTQDLHSRL+L
Sbjct: 299 TSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVL 358
Query: 299 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNL 358
DHPRGY RQLHKCIVAHSLGQAVFDGN+KVNRYAQ+TDAGQLTRSLLLEPRATVNVKPNL
Sbjct: 359 DHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNL 418
Query: 359 QIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQ 418
QIIADDVKCSHGAAISDLEE+QLFYF ARGIDLETARKAL+FSFG EVIER PY SIR +
Sbjct: 419 QIIADDVKCSHGAAISDLEENQLFYFLARGIDLETARKALIFSFGGEVIERLPYSSIRKK 478
Query: 419 VVSHVKNLMGTT 430
V +H+K L+ T
Sbjct: 479 VETHIKALLEPT 490
>gi|297742116|emb|CBI33903.3| unnamed protein product [Vitis vinifera]
Length = 480
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/492 (63%), Positives = 364/492 (73%), Gaps = 79/492 (16%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR A FSDPFV+
Sbjct: 1 MAATLLSPHLLLN----PKLSIQNSASKFPTPKSRSTP-KIR---------AAFSDPFVL 46
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 47 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 104
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I K+VS
Sbjct: 105 TPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVS 164
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPA---------------EGND----------- 203
+F++ F+ GDLFWS+NG+G PD+ V+YVPA EG D
Sbjct: 165 EFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNP 223
Query: 204 -------------------------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 238
CYWAN+V EVVIG+G KV+HSY+Q+QSL+AAHIKW
Sbjct: 224 RVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKW 283
Query: 239 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 298
T+V+Q ++S YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL V DQTQDLHSRL+L
Sbjct: 284 TSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVL 343
Query: 299 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNL 358
DHPRGY RQLHKCIVAHSLGQAVFDGN+KVNRYAQ+TDAGQLTRSLLLEPRATVNVKPNL
Sbjct: 344 DHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNL 403
Query: 359 QIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQ 418
QIIADDVKCSHGAAISDLEE+QLFYF ARGIDLETARKAL+FSFG EVIER PY SIR +
Sbjct: 404 QIIADDVKCSHGAAISDLEENQLFYFLARGIDLETARKALIFSFGGEVIERLPYSSIRKK 463
Query: 419 VVSHVKNLMGTT 430
V +H+K L+ T
Sbjct: 464 VETHIKALLEPT 475
>gi|147775510|emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]
Length = 593
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/496 (62%), Positives = 365/496 (73%), Gaps = 79/496 (15%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR A FSDPFV+
Sbjct: 16 MAASLLSPHLLLN----PKLSIQTSASKFPTPKSRSTP-KIR---------AAFSDPFVL 61
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 62 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 119
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I K VS
Sbjct: 120 TPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKXVS 179
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPA---------------EGND----------- 203
+F++ F+ GDLFWS+NG+G PD+ V+YVPA EG D
Sbjct: 180 EFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNP 238
Query: 204 -------------------------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 238
CYWAN+V EVVIG+G KV+HSY+Q+QSL+AAHIKW
Sbjct: 239 RVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKW 298
Query: 239 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 298
T+V+Q ++S YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL V DQTQDLHSRL+L
Sbjct: 299 TSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVL 358
Query: 299 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNL 358
DHPRGY RQLHKCIVAHSLGQAVFDGN+KVNRYAQ+TDAGQLTRSLLLEPRATVNVKPNL
Sbjct: 359 DHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNL 418
Query: 359 QIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQ 418
QIIADDVKCSHGAAISDLEE+QLFYF ARGIDLETARKAL+FSFG EVIER PY SIR +
Sbjct: 419 QIIADDVKCSHGAAISDLEENQLFYFLARGIDLETARKALIFSFGGEVIERLPYSSIRKK 478
Query: 419 VVSHVKNLMGTTDVSF 434
V +H+K L+ T +F
Sbjct: 479 VETHIKALLEPTLKAF 494
>gi|449461525|ref|XP_004148492.1| PREDICTED: protein ABCI7, chloroplastic-like [Cucumis sativus]
gi|449521999|ref|XP_004168016.1| PREDICTED: protein ABCI7, chloroplastic-like [Cucumis sativus]
Length = 496
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 302/500 (60%), Positives = 357/500 (71%), Gaps = 78/500 (15%)
Query: 1 MSALSFSPHLHININRNPKLTP------------KRRAKPNKI---RVSLQTTFPQATFS 45
M+ +F+PH+ R P TP KR+ K N I RVSLQ + P + S
Sbjct: 1 MATFTFTPHIG---GRLP--TPSLSVSSSYSSTSKRKPKFNSITTTRVSLQASTP--SLS 53
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
DPFV+QLAE+LEDSL SSSSS P PLQKLR+SS++ LLSTPWPSR+DEPFRFTD S I
Sbjct: 54 DPFVLQLAETLEDSLSSSSSSS-SPFPLQKLRESSAENLLSTPWPSRRDEPFRFTDVSFI 112
Query: 106 KSSQIQPITRPSSSLDVST---DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-S 161
K SQI PI+ P ++S+ + QF ++V++DG NS NL+ LP+GVYVGS + + S
Sbjct: 113 KQSQIHPISNPPQFSELSSIPLETQFANVVIVDGHFVNSVSNLTELPNGVYVGSFIDLPS 172
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA---------------------- 199
+ + KRVS+F+ GDLFWSING+GAPDL V+YVPA
Sbjct: 173 ESVGKRVSEFVDGKFAGDLFWSINGVGAPDLTVVYVPAGCKVENPIHFRYYSINGGDEGS 232
Query: 200 -----------------------------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 230
+G YW+N VLEVVIG GGKV+HSY+QNQS
Sbjct: 233 KELAVSNPRVLVLVENGGEIEIIEEFLSGDGGKSYWSNPVLEVVIGSGGKVKHSYIQNQS 292
Query: 231 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 290
LNAAHIKWT+V+QE+ S YELVE+STGG+LSRHNVH+QQLGP+T TELS+ HL + +QTQ
Sbjct: 293 LNAAHIKWTSVQQESTSAYELVEISTGGRLSRHNVHIQQLGPETTTELSTLHLSIGNQTQ 352
Query: 291 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRA 350
DLHS L+LDHPRGY RQLHKCIVA+ GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRA
Sbjct: 353 DLHSSLVLDHPRGYSRQLHKCIVANPQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRA 412
Query: 351 TVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
TVNVKPNLQIIADDVKCSHGAAISDLEE+QLFYFQARGIDLETARKAL+FSFGAEVIER
Sbjct: 413 TVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERL 472
Query: 411 PYPSIRNQVVSHVKNLMGTT 430
P PS+R +V +H+K L+ T
Sbjct: 473 PSPSVRKRVENHIKELLNPT 492
>gi|224138876|ref|XP_002326712.1| predicted protein [Populus trichocarpa]
gi|222834034|gb|EEE72511.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 306/463 (66%), Positives = 341/463 (73%), Gaps = 67/463 (14%)
Query: 23 KRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQ 82
K++ KP +S T QA+FSDPFV+QLAE+LEDSL S S LQ+LRDSSS+
Sbjct: 3 KQKQKPKSFSLS-TTPITQASFSDPFVLQLAETLEDSLSPSVS-------LQRLRDSSSE 54
Query: 83 TLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD----VSTDAQFPSLVLIDGFI 138
+LLST WPSRKDEPFRFTDTS I+ SQI PIT+P LD ++ D PS+V+ DGF+
Sbjct: 55 SLLSTSWPSRKDEPFRFTDTSFIRLSQIVPITKPPQ-LDYLPSINEDTLLPSIVIADGFV 113
Query: 139 QNSALNLSNLPDGVYVGSLLG-VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
NS LS LPDGVYVGSLL SD I +RV +F+ +F+ GDLFWSING+GA D+ V+YV
Sbjct: 114 LNSMSKLSTLPDGVYVGSLLSDSSDRIAERVLEFVGDFEWGDLFWSINGLGAHDMTVVYV 173
Query: 198 PA---------------------------------------------------EGND--C 204
PA EGND
Sbjct: 174 PAGVKVENPIHFKYVSVEGGEKGSKKLPVSNPRVFVVVEEGGEVGIIEEFVSKEGNDDRY 233
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
YWAN VLEVVIGKG KVRHSY+Q+QSLN+AHIKWTAVRQE AS YELVEVSTGGKLSRHN
Sbjct: 234 YWANPVLEVVIGKGAKVRHSYVQSQSLNSAHIKWTAVRQEAASTYELVEVSTGGKLSRHN 293
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
+HVQQLGPDT TELS+FHL V DQTQDLHSRL+LDHPRG +QLHKCIVAHS GQAVFDG
Sbjct: 294 LHVQQLGPDTATELSTFHLSVGDQTQDLHSRLILDHPRGRSQQLHKCIVAHSQGQAVFDG 353
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE+QLFYF
Sbjct: 354 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYF 413
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
QARGIDLETARKALVFSFGAEVIER P ++ QV SHVK L+
Sbjct: 414 QARGIDLETARKALVFSFGAEVIERLPNSFMQKQVESHVKGLL 456
>gi|359475767|ref|XP_003631753.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
[Vitis vinifera]
Length = 527
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/495 (62%), Positives = 359/495 (72%), Gaps = 85/495 (17%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR ATFSDPFV
Sbjct: 1 MAATLLSPHLLLN----PKLSIQTSASKFPTPKSRSTP-KIR---------ATFSDPFVP 46
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 47 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 104
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I KRVS
Sbjct: 105 TPISHPPTSIAISTDTQFPNLCIVDGHIIYSLSNLSQLPTGVFVGSLSSLPSETITKRVS 164
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPA---------------EGND----------- 203
+F++ F+ GDLFWS+NG+G D+ V+YVPA EG D
Sbjct: 165 EFVANFE-GDLFWSLNGLGTLDMVVVYVPAGCRVEMPLHIVYXSVEGGDIGFKKLPVSNP 223
Query: 204 -------------------------CYWANSVLEV------VIGKGGKVRHSYLQNQSLN 232
CYWAN+V EV VIG+G KV+HSY+Q+QSL+
Sbjct: 224 RVFVLVEEGGEIGEIEEFVGGGENKCYWANAVTEVRIIIILVIGEGAKVKHSYIQSQSLS 283
Query: 233 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 292
AAHIKWT+V+Q ++ YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL V D TQDL
Sbjct: 284 AAHIKWTSVQQGSSGSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDPTQDL 343
Query: 293 HSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 352
H+RL+LDHPRGY RQLHKCIVAHSLGQAVFDGN+KVNRYAQQTDAGQLTRSLLLEPRATV
Sbjct: 344 HTRLVLDHPRGYFRQLHKCIVAHSLGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATV 403
Query: 353 NVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPY 412
NVKPNLQIIADDVKCSHGAAISDLEE+QLFYF ARGIDLETARK L+FSFG EVIER PY
Sbjct: 404 NVKPNLQIIADDVKCSHGAAISDLEENQLFYFLARGIDLETARKTLIFSFGDEVIERLPY 463
Query: 413 PSIRNQVVSHVKNLM 427
SIR +V +H+K L+
Sbjct: 464 SSIRKKVETHIKALL 478
>gi|297851692|ref|XP_002893727.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
gi|297339569|gb|EFH69986.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
Length = 476
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 284/469 (60%), Positives = 336/469 (71%), Gaps = 61/469 (13%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + + QA+FSDPFV+QLAESLEDSL +S SS PL
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSIR-----AQASFSDPFVLQLAESLEDSLSASPSSSSLPL- 68
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
Q++RDSS++TLLSTPWPSRKDEPFRFTDTS I+ SQI+P++ R S LD T+ QFP
Sbjct: 69 -QRIRDSSAETLLSTPWPSRKDEPFRFTDTSFIRFSQIEPVSTHQRNSEILDNLTETQFP 127
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY GS G+ D + RVS+FI F GDLFWSINGMGA
Sbjct: 128 NAVIIDGFVSNLTIGPSDLPDGVYFGSFSGLPDELTNRVSEFIGNFDSGDLFWSINGMGA 187
Query: 190 PDLGVIYVPA-------------------------------------EGNDC-------- 204
PDL VIYVP EG +
Sbjct: 188 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRGFVLVEEGGEIGIVEEFVG 247
Query: 205 ------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
YW N VLEVV+ K GK++HSYLQ +S+ +AH+KWT VRQE S YELVEVSTGG
Sbjct: 248 KDEEGFYWTNPVLEVVVQKNGKLKHSYLQKESMASAHVKWTFVRQEAESEYELVEVSTGG 307
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
KL RHNVHVQQLGPDT TEL++FH+ V++QT DLHSR++LDHPRG RQLHKCIVAHS G
Sbjct: 308 KLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSRIVLDHPRGSSRQLHKCIVAHSSG 367
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
QAVFDGNV+VNR+AQQT+AGQLTRSLLL+PRATVN+KPNLQIIADDVKCSHGAAISDLEE
Sbjct: 368 QAVFDGNVRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEE 427
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
QLFYFQARGI+LETAR+AL+ SFG+EVIE+FP IR+Q +HVK L+
Sbjct: 428 DQLFYFQARGINLETARRALISSFGSEVIEKFPNREIRDQARNHVKGLL 476
>gi|18398463|ref|NP_564404.1| protein ABCI7 [Arabidopsis thaliana]
gi|75180162|sp|Q9LQK7.1|AB7I_ARATH RecName: Full=Protein ABCI7, chloroplastic; AltName: Full=ABC
transporter I family member 7; Short=ABC transporter
ABCI.7; Short=AtABCI7; AltName: Full=Non-intrinsic ABC
protein 6; AltName: Full=Plastid SufD-like protein;
Flags: Precursor
gi|8920626|gb|AAF81348.1|AC007767_28 Contains an uncharacterized protein family (UPF0051) domain
PF|01458 [Arabidopsis thaliana]
gi|115646721|gb|ABJ17094.1| At1g32500 [Arabidopsis thaliana]
gi|332193373|gb|AEE31494.1| protein ABCI7 [Arabidopsis thaliana]
Length = 475
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 283/469 (60%), Positives = 334/469 (71%), Gaps = 62/469 (13%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + V QA+FSDPFV+QLAESLEDSL +S SS
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSVR-----AQASFSDPFVLQLAESLEDSLSASPSSSLP--- 66
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
LQ++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+ R S LD T+ QF
Sbjct: 67 LQRIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY G G+ D + R+S+FI F GDLFWSINGMGA
Sbjct: 127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186
Query: 190 PDLGVIYVPA-------------------------------------EGNDC-------- 204
PDL VIYVP EG +
Sbjct: 187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVG 246
Query: 205 ------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
YW N VLEVV+ K K++HSYLQ +S+ +AHIKWT VRQE S YELVEVSTGG
Sbjct: 247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGG 306
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
KL RHNVHVQQLGPDT TEL++FH+ V++QT DLHS+++LDHPRG RQLHKCIVAHS G
Sbjct: 307 KLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSG 366
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
QAVFDGNV+VNR+AQQT+AGQLTRSLLL+PRATVN+KPNLQIIADDVKCSHGAAISDLEE
Sbjct: 367 QAVFDGNVRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEE 426
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
QLFYFQARGIDLETAR+AL+ SFG+EVIE+FP IR+Q +HVK L+
Sbjct: 427 DQLFYFQARGIDLETARRALISSFGSEVIEKFPNREIRDQARNHVKGLL 475
>gi|21554655|gb|AAM63647.1| unknown [Arabidopsis thaliana]
Length = 475
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 283/469 (60%), Positives = 334/469 (71%), Gaps = 62/469 (13%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + V QA+FSDPFV+QLAESLEDSL +S SS
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSVR-----AQASFSDPFVLQLAESLEDSLSASPSSSLP--- 66
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
LQ++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+ R S LD T+ QF
Sbjct: 67 LQRIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY G G+ D + R+S+FI F GDLFWSINGMGA
Sbjct: 127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186
Query: 190 PDLGVIYVPA-------------------------------------EGNDC-------- 204
PDL VIYVP EG +
Sbjct: 187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEISIVEEFVG 246
Query: 205 ------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
YW N VLEVV+ K K++HSYLQ +S+ +AHIKWT VRQE S YELVEVSTGG
Sbjct: 247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGG 306
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
KL RHNVHVQQLGPDT TEL++FH+ V++QT DLHS+++LDHPRG RQLHKCIVAHS G
Sbjct: 307 KLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSG 366
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
QAVFDGNV+VNR+AQQT+AGQLTRSLLL+PRATVN+KPNLQIIADDVKCSHGAAISDLEE
Sbjct: 367 QAVFDGNVRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEE 426
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
QLFYFQARGIDLETAR+AL+ SFG+EVIE+FP IR+Q +HVK L+
Sbjct: 427 DQLFYFQARGIDLETARRALISSFGSEVIEKFPNREIRDQARNHVKGLL 475
>gi|357482367|ref|XP_003611469.1| Protein ABCI7 [Medicago truncatula]
gi|355512804|gb|AES94427.1| Protein ABCI7 [Medicago truncatula]
Length = 474
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/450 (58%), Positives = 316/450 (70%), Gaps = 62/450 (13%)
Query: 31 IRVSLQTTFPQATF--SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTP 88
IR + TF A SDPF++ LAE+LEDS+P+ P PLQ LR +SS +LLS+P
Sbjct: 29 IRTKTRVTFNNAISISSDPFILDLAETLEDSVPT-------PQPLQNLRQASSHSLLSSP 81
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV-LIDGFIQNSALNLSN 147
WPSRK EPFRF D S ++SSQI + P + + QFP + ++DG S +S
Sbjct: 82 WPSRKHEPFRFNDFSFLRSSQI--LPAPIPTTTTTATDQFPCHISIVDGHFIQSTSKISE 139
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP--------- 198
DGVYVG+L ++ + KRV + +S GDLFWSINGMGAPDL V+YVP
Sbjct: 140 FSDGVYVGNLSKLNGVVAKRVLELVSGLDGGDLFWSINGMGAPDLTVVYVPEGVRVETPV 199
Query: 199 ----------AEG-------------------------------NDCYWANSVLEVVIGK 217
EG N+CYW+N+VLEVVIG+
Sbjct: 200 HLGYVSLQGSKEGGNELYLSNPRVLVVVEKGGEVDIVEEFEGNENECYWSNAVLEVVIGE 259
Query: 218 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 277
GGKVRHSY+Q QS+ AAHIKWT+VRQE++S YEL EVSTGGKL RHN+H++QLGPDT TE
Sbjct: 260 GGKVRHSYVQTQSMLAAHIKWTSVRQESSSTYELTEVSTGGKLGRHNLHIKQLGPDTVTE 319
Query: 278 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDA 337
LS+ HL V +QTQDLHS L+LDHPRGY RQ+HKCIVAHS GQAVFDGNVKVNRYAQQTDA
Sbjct: 320 LSTLHLSVGNQTQDLHSSLVLDHPRGYSRQIHKCIVAHSQGQAVFDGNVKVNRYAQQTDA 379
Query: 338 GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKA 397
GQL+RSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE+SQL YFQARGID ETAR+
Sbjct: 380 GQLSRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEQSQLLYFQARGIDSETARRV 439
Query: 398 LVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
L+F+FG EVI++FP SIR++V S +K+L+
Sbjct: 440 LIFAFGGEVIDKFPNSSIRDRVRSQIKSLL 469
>gi|388493956|gb|AFK35044.1| unknown [Medicago truncatula]
Length = 450
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/425 (58%), Positives = 291/425 (68%), Gaps = 62/425 (14%)
Query: 31 IRVSLQTTFPQATF--SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTP 88
IR + TF A SDPF++ LAE+LEDS+P+ P PLQ LR +SS +LLS+P
Sbjct: 29 IRTKTRVTFNNAISISSDPFILDLAETLEDSVPT-------PQPLQNLRQASSHSLLSSP 81
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV-LIDGFIQNSALNLSN 147
WPSRK EPFRF D S ++SSQI + P + + QFP + ++DG S +S
Sbjct: 82 WPSRKHEPFRFNDFSFLRSSQI--LPAPIPTTTTTATDQFPCHISIVDGHFIQSTSKISE 139
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP--------- 198
DGVYVG+L ++ + KRV + +S GDLFWSINGMGAPDL V+YVP
Sbjct: 140 FSDGVYVGNLSKLNGVVAKRVLELVSGLDGGDLFWSINGMGAPDLTVVYVPEGVRVETPV 199
Query: 199 ----------AEG-------------------------------NDCYWANSVLEVVIGK 217
EG N+CYW+N+VLEVVIG+
Sbjct: 200 HLGYVSLQGSKEGGNELYLSNPRVLVVVEKGGEVDIVEEFEGNENECYWSNAVLEVVIGE 259
Query: 218 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 277
GGKV+HSY+Q QS+ AAHIKWT+VRQE++S YEL EVSTG KL RHN+H++QLGPDT TE
Sbjct: 260 GGKVKHSYVQTQSMLAAHIKWTSVRQESSSTYELTEVSTGSKLGRHNLHIKQLGPDTVTE 319
Query: 278 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDA 337
LS+ HL V +QTQDLHS L+LDHPRGY RQ+HKCIVAHS GQAVFDGNVKVNRYAQQTDA
Sbjct: 320 LSTLHLSVGNQTQDLHSSLVLDHPRGYSRQIHKCIVAHSQGQAVFDGNVKVNRYAQQTDA 379
Query: 338 GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKA 397
GQL+RSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE+SQL YFQARGID ETARK
Sbjct: 380 GQLSRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEQSQLLYFQARGIDSETARKG 439
Query: 398 LVFSF 402
F
Sbjct: 440 SNFCL 444
>gi|356541420|ref|XP_003539175.1| PREDICTED: protein ABCI7, chloroplastic-like [Glycine max]
Length = 452
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 253/464 (54%), Positives = 314/464 (67%), Gaps = 54/464 (11%)
Query: 1 MSALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSL 60
M+ + FSP + + P P K+RV Q +A SDP+V++LAE+LEDS
Sbjct: 1 MNGIGFSPAGYSPV------IPSSSCFPKKLRVQPQ----RALSSDPYVLELAETLEDSF 50
Query: 61 PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL 120
PSS S+ PLPLQ LR SSSQ+LLSTPWPSR+DEPFRFTD S I+ S+I P++ P+ SL
Sbjct: 51 PSSPST---PLPLQNLRLSSSQSLLSTPWPSRRDEPFRFTDLSFIRQSRILPVS-PTISL 106
Query: 121 DVSTDAQFPSLVLI-------DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
T + P+ V + +Q + + P G S+ G++ + V ++
Sbjct: 107 LTPT-SHLPNDVYVGSLSSSSPSLLQRVSHFICPFPIGDLFFSINGIAAPDLTLV--YVP 163
Query: 174 EFQCGDLFWSINGMGAP--------------DLGVIYV----------------PAEGND 203
E D+ ++ M P + V+ V P ND
Sbjct: 164 EGCHVDIPIHLDYMLPPTPSTDDSDAAMHLSNPRVLVVVEKGAHVNIIEDFPASPENQND 223
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
YW+N+ E VIG+G K+ HSY+Q QS AAHIKWT++RQE +S YEL EVSTGGKL RH
Sbjct: 224 SYWSNAAFEAVIGQGAKLTHSYIQTQSFRAAHIKWTSIRQEASSTYELTEVSTGGKLGRH 283
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 323
N+H+QQLGPDT TELS+ HL V+DQTQDLHS L+LDHPRGY RQLHKCIV HS GQAVFD
Sbjct: 284 NLHIQQLGPDTVTELSTLHLSVADQTQDLHSTLVLDHPRGYSRQLHKCIVTHSQGQAVFD 343
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
GN+KVNRYAQQTDAGQLTR+LLLEPRATVNVKPNLQI+ADDVKCSHGAAISDLEESQL Y
Sbjct: 344 GNIKVNRYAQQTDAGQLTRTLLLEPRATVNVKPNLQIVADDVKCSHGAAISDLEESQLLY 403
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
FQARGID+ETAR+ LVF+FG+EVI++FPY SIR++V S +KNL+
Sbjct: 404 FQARGIDIETARRVLVFAFGSEVIDKFPYSSIRDRVRSQIKNLL 447
>gi|224126311|ref|XP_002329523.1| predicted protein [Populus trichocarpa]
gi|222870232|gb|EEF07363.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/237 (84%), Positives = 216/237 (91%), Gaps = 2/237 (0%)
Query: 196 YVPAEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
+V EGND YWAN VLEVVIGKG KVRHSY+Q+QSLN+AHIKWTAVRQE AS YELVE
Sbjct: 15 FVSKEGNDDKRYWANPVLEVVIGKGAKVRHSYVQSQSLNSAHIKWTAVRQEAASSYELVE 74
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
VSTGGKLSRHN+HVQQLGPDT TELS+FHL V DQTQDLHSRL+LDHPRGY +QLHKCIV
Sbjct: 75 VSTGGKLSRHNLHVQQLGPDTATELSTFHLSVGDQTQDLHSRLVLDHPRGYSQQLHKCIV 134
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
AHS GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN+KPNLQIIADDVKCSHGAAI
Sbjct: 135 AHSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNIKPNLQIIADDVKCSHGAAI 194
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
SDLEE+QLFYFQARGIDLETARKALVFSFGAEVIE+ PY IR QV +HVK L+ ++
Sbjct: 195 SDLEETQLFYFQARGIDLETARKALVFSFGAEVIEKLPYSFIRKQVENHVKGLLDSS 251
>gi|116790030|gb|ABK25476.1| unknown [Picea sitchensis]
Length = 474
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 283/441 (64%), Gaps = 59/441 (13%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
DPFV++LAE LE+S +SS++L L +LR++ ++ + PWPS KDE FRFTD
Sbjct: 36 ALGDPFVLELAEKLEES--ASSNNLKNK-SLHRLRETCTEEVFRRPWPSAKDESFRFTDI 92
Query: 103 SMIKSSQIQPITRPSSSLDV-STDAQFP---SLVLIDGFIQNSALNLSNLPDGVYVGSLL 158
+K S+IQ +S LD+ + P +++LIDG + S + + LP GV+VGSL
Sbjct: 93 KFLKQSKIQVSEPLNSPLDLQGLENGRPGAYTILLIDGLLSTSHSHTAGLPHGVFVGSLS 152
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP-------------------- 198
+ D V + GDLF S+NG+G+ DLGV+ VP
Sbjct: 153 SLPDDY---VLPPLEAADGGDLFSSLNGIGSRDLGVVIVPEGCKLERPLHVVYYSQQGGD 209
Query: 199 -----------------------------AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 229
N YW NSVL V + + ++ HS++Q Q
Sbjct: 210 DLQSLCVSNPRLVVVLGKGAEMEIVEEFRGAANKSYWTNSVLHVSLEEKAQLCHSFVQLQ 269
Query: 230 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 289
+ A H+KWT V+Q T S Y+LVE S+GG+LSRHN+ +QQLGPDT TE+S+FHL +QT
Sbjct: 270 NPCAVHMKWTFVQQGTLSSYKLVETSSGGRLSRHNLQIQQLGPDTVTEVSTFHLAGENQT 329
Query: 290 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPR 349
QDLHS+++L+HPRGY RQLHKCIV HS AVFDGNVKVNR+AQ TDAGQL+RSLLL PR
Sbjct: 330 QDLHSKIILNHPRGYSRQLHKCIVTHSSAHAVFDGNVKVNRHAQLTDAGQLSRSLLLAPR 389
Query: 350 ATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIER 409
ATVNVKPNLQI+ADDVKCSHGAAISDLEE QLFYFQARG+D +TAR ALVFSFGAEV+ER
Sbjct: 390 ATVNVKPNLQIVADDVKCSHGAAISDLEEDQLFYFQARGVDAKTARNALVFSFGAEVMER 449
Query: 410 FPYPSIRNQVVSHVKNLMGTT 430
FP +RN+V + VK+L+
Sbjct: 450 FPDKYLRNKVENDVKSLLAAA 470
>gi|255635600|gb|ACU18150.1| unknown [Glycine max]
Length = 276
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/230 (76%), Positives = 201/230 (87%)
Query: 198 PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
P ND YW+N+ E VIG+G K+ HSY+Q QS AAHIKWT++RQE +S YEL EVSTG
Sbjct: 42 PENQNDSYWSNAAFEAVIGQGAKLTHSYIQTQSFRAAHIKWTSIRQEASSTYELTEVSTG 101
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 317
GKL RHN+H+QQLGPDT TELS+ HL V+DQTQDLHS L+LDHPRGY RQLHKCIV HS
Sbjct: 102 GKLGRHNLHIQQLGPDTVTELSTLHLSVADQTQDLHSTLVLDHPRGYSRQLHKCIVTHSQ 161
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
GQAVFDGN+KVNRYAQQTDAGQLTR+LLLEPRATVNVKPNLQI+ADDVKCSHGAAISDLE
Sbjct: 162 GQAVFDGNIKVNRYAQQTDAGQLTRTLLLEPRATVNVKPNLQIVADDVKCSHGAAISDLE 221
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
ESQL YFQARGID+ETAR+ LVF+FG+EVI++FPY S R++V S +KNL+
Sbjct: 222 ESQLLYFQARGIDIETARRVLVFAFGSEVIDKFPYSSSRDRVRSQIKNLL 271
>gi|296087515|emb|CBI34104.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/210 (81%), Positives = 193/210 (91%)
Query: 218 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 277
G KV+HSY+Q+QSL+AAHIKWT+V+Q ++ YEL+EVSTGGKLSRHNV++QQ+GPDT TE
Sbjct: 20 GAKVKHSYIQSQSLSAAHIKWTSVQQGSSGSYELIEVSTGGKLSRHNVNIQQVGPDTVTE 79
Query: 278 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDA 337
LS+FHL V D TQDLH+RL+LDHPRGY RQLHKCIVAHSLGQAVFDGN+KVNRYAQQTDA
Sbjct: 80 LSAFHLSVGDPTQDLHTRLVLDHPRGYFRQLHKCIVAHSLGQAVFDGNIKVNRYAQQTDA 139
Query: 338 GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKA 397
GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE+QLFYF ARGIDLETARK
Sbjct: 140 GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFYFLARGIDLETARKT 199
Query: 398 LVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
L+FSFG EVIER PY SIR +V +H+K L+
Sbjct: 200 LIFSFGDEVIERLPYSSIRKKVETHIKALL 229
>gi|302761748|ref|XP_002964296.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
gi|300168025|gb|EFJ34629.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
Length = 469
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/449 (44%), Positives = 262/449 (58%), Gaps = 67/449 (14%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQP-LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
D F+++LAE LEDS+ + + L L+ LRD S++ ++ WPS KDE +RFT+
Sbjct: 21 DFFLLELAEKLEDSVSKGAGEERRSNLVLKALRDGSAEVAVTCKWPSSKDEAYRFTNVKF 80
Query: 105 IKSSQIQPIT-----RPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSL 157
+K S+IQP+ S S + D + S LV +DG + + +P VYVGS+
Sbjct: 81 LKDSEIQPLIIGGDEVESLSFEGMEDEEGESIRLVFVDGILSPELSKVEGVPPEVYVGSI 140
Query: 158 LGVSD-GIMKRVSDFISEFQC---GDLFWSINGMGAPDLGVIY----------------- 196
L D + K V IS+ D F S+NG+GA DLGV+
Sbjct: 141 LAAPDEKLQKYVVPRISQASTLIDKDAFVSLNGIGALDLGVVLVPKDLKLEKPIHVVYYS 200
Query: 197 ------------------------VPAEG--------------NDCYWANSVLEVVIGKG 218
V +EG +W NSV E+VI G
Sbjct: 201 TPRKNLKNQLEPQVVSMTNPRLLVVASEGATVHLVEEFRGGTEESSHWTNSVCEIVIESG 260
Query: 219 GKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETEL 278
V H +Q Q ++ +K T V QE AS Y+ V+V G KLSRHN+H++QLG DT+TE+
Sbjct: 261 ASVSHDLIQTQGRSSVSMKKTYVSQEKASSYKCVDVELGSKLSRHNLHIEQLGSDTKTEM 320
Query: 279 SSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAG 338
+F L DQ QDLHSRL+L+HPRGY RQL KCIV +S G VFDGN++VNR AQQTDAG
Sbjct: 321 LTFLLCGRDQVQDLHSRLILNHPRGYARQLQKCIVMNSTGHGVFDGNIRVNRDAQQTDAG 380
Query: 339 QLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKAL 398
QL+RSLLL PRATVN KP+LQI ADDVKC+HG AISDL+E QLFYF+ARGID +TAR AL
Sbjct: 381 QLSRSLLLAPRATVNAKPSLQINADDVKCTHGVAISDLDEDQLFYFRARGIDAQTARSAL 440
Query: 399 VFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
VFSFGAEVIE+ +++ V +K+L+
Sbjct: 441 VFSFGAEVIEKLESKTMQKSVEELLKSLL 469
>gi|302766733|ref|XP_002966787.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
gi|300166207|gb|EFJ32814.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
Length = 469
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/449 (44%), Positives = 263/449 (58%), Gaps = 67/449 (14%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQP-LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
D F+++LAE LEDS+ + + L L+ LRD S++ ++ WPS KDE +RFT+
Sbjct: 21 DFFLLELAEKLEDSVSKGAGEERRSNLVLKALRDGSAEVAVTCKWPSSKDEAYRFTNVKF 80
Query: 105 IKSSQIQPITR-----PSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSL 157
+K S+IQP+ S S + D + S LV +DG + + +P VYVGS+
Sbjct: 81 LKDSEIQPLILGEDEVESLSFEGMEDEEDESIRLVFVDGILSPELSKVEGVPPEVYVGSI 140
Query: 158 LGVSD-GIMKRVSDFISEFQC---GDLFWSINGMGAPDLGVIY----------------- 196
LG D + K V I++ D F S+NG+GA DLGV+
Sbjct: 141 LGAPDEKLQKYVVPRIAQASTLIDKDAFVSLNGIGALDLGVVLVPKDLKLEKPIHVVYYS 200
Query: 197 ------------------------VPAEG--------------NDCYWANSVLEVVIGKG 218
V +EG +W NSV E+VI G
Sbjct: 201 TPRKNLKNQLEPQVVSMTNPRLLVVASEGATVHLVEEFRGGTEESSHWTNSVCEIVIESG 260
Query: 219 GKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETEL 278
V H +Q Q ++ +K T V QE AS Y+ V+V G KLSRHN+H++QLG DT+T++
Sbjct: 261 ASVSHDLIQTQERSSVSMKKTYVSQEKASSYKCVDVELGSKLSRHNLHIEQLGSDTKTDM 320
Query: 279 SSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAG 338
+F L DQ QDLHSRL+L+HPRGY RQL KCIV +S G VFDGN++VNR AQQTDAG
Sbjct: 321 LTFLLCGRDQVQDLHSRLILNHPRGYARQLQKCIVMNSTGHGVFDGNIRVNRDAQQTDAG 380
Query: 339 QLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKAL 398
QL+RSLLL PRATVN KP+LQI ADDVKC+HG AISDL+E QLFYF+ARGID +TAR AL
Sbjct: 381 QLSRSLLLAPRATVNAKPSLQINADDVKCTHGVAISDLDEDQLFYFRARGIDAQTARSAL 440
Query: 399 VFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
VFSFGAEVIE+ +++ V +K+L+
Sbjct: 441 VFSFGAEVIEKLESKTMQKSVEELLKSLL 469
>gi|326488209|dbj|BAJ89943.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 508
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 265/448 (59%), Gaps = 76/448 (16%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 73 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 125
Query: 102 TSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSLLGV 160
S ++S I R + S VL DG + +A G +V +L +
Sbjct: 126 ISYLRSLPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSALADM 177
Query: 161 SDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA----------------- 199
G + F D+F+ N +GA D+ V++VP
Sbjct: 178 PPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSG 237
Query: 200 -----------------------------------EGNDCYWANSVLEVVIGKGGKVRHS 224
E CYWAN V+++++ +G +V HS
Sbjct: 238 SDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHS 297
Query: 225 YLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 284
Y+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+TET+LS+FHL
Sbjct: 298 YVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLT 357
Query: 285 VSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRS 343
+ Q DLHSRL+LDHPRG+ RQLHK ++A G +FDGN++VNRYAQQTDAGQ T+
Sbjct: 358 SQNKQIHDLHSRLILDHPRGFSRQLHK-LIACGTGNGIFDGNIQVNRYAQQTDAGQQTKC 416
Query: 344 LLLEPRATVNVKPNLQIIADDVKCSHGAAIS-DLEESQLFYFQARGIDLETARKALVFSF 402
LLL P+A VNVKPNLQIIADDVKC+HGAAIS +L+ ++LFYFQARG+D TA AL+FSF
Sbjct: 417 LLLSPKAVVNVKPNLQIIADDVKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSF 476
Query: 403 GAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GA+VI R P+ +I + ++ +K L+ +
Sbjct: 477 GAQVINRIPFKAIEKKALAQLKELLAVS 504
>gi|326523615|dbj|BAJ92978.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 197/451 (43%), Positives = 271/451 (60%), Gaps = 82/451 (18%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 55 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 107
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 108 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 156
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA-------------- 199
+ G + F D+F+ N +GA D+ V++VP
Sbjct: 157 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFA 216
Query: 200 --------------------------------------EGNDCYWANSVLEVVIGKGGKV 221
E CYWAN V+++++ +G +V
Sbjct: 217 YSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARV 276
Query: 222 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 281
HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+TET+LS+F
Sbjct: 277 VHSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTF 336
Query: 282 HLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQL 340
HL + Q DLHSRL+LDHPRG+ RQLHK ++A G +FDGN++VNRYAQQTDAGQ
Sbjct: 337 HLTSQNKQIHDLHSRLILDHPRGFSRQLHK-LIACGTGNGIFDGNIQVNRYAQQTDAGQQ 395
Query: 341 TRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS-DLEESQLFYFQARGIDLETARKALV 399
T+ LLL P+A VNVKPNLQIIADDVKC+HGAAIS +L+ ++LFYFQARG+D TA AL+
Sbjct: 396 TKCLLLSPKAVVNVKPNLQIIADDVKCTHGAAISGELDPNELFYFQARGVDANTATDALL 455
Query: 400 FSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
FSFGA+VI R P+ +I + ++ +K L+ +
Sbjct: 456 FSFGAQVINRIPFKAIEKKALAQLKELLAVS 486
>gi|326496228|dbj|BAJ94576.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528307|dbj|BAJ93335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 197/451 (43%), Positives = 271/451 (60%), Gaps = 82/451 (18%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 51 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 103
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 104 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 152
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA-------------- 199
+ G + F D+F+ N +GA D+ V++VP
Sbjct: 153 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFA 212
Query: 200 --------------------------------------EGNDCYWANSVLEVVIGKGGKV 221
E CYWAN V+++++ +G +V
Sbjct: 213 YSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARV 272
Query: 222 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 281
HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+TET+LS+F
Sbjct: 273 VHSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTF 332
Query: 282 HLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQL 340
HL + Q DLHSRL+LDHPRG+ RQLHK ++A G +FDGN++VNRYAQQTDAGQ
Sbjct: 333 HLTSQNKQIHDLHSRLILDHPRGFSRQLHK-LIACGTGNGIFDGNIQVNRYAQQTDAGQQ 391
Query: 341 TRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS-DLEESQLFYFQARGIDLETARKALV 399
T+ LLL P+A VNVKPNLQIIADDVKC+HGAAIS +L+ ++LFYFQARG+D TA AL+
Sbjct: 392 TKCLLLSPKAVVNVKPNLQIIADDVKCTHGAAISGELDPNELFYFQARGVDANTATDALL 451
Query: 400 FSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
FSFGA+VI R P+ +I + ++ +K L+ +
Sbjct: 452 FSFGAQVINRIPFKAIEKKALAQLKELLAVS 482
>gi|413947304|gb|AFW79953.1| hypothetical protein ZEAMMB73_288078 [Zea mays]
Length = 481
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/472 (44%), Positives = 281/472 (59%), Gaps = 81/472 (17%)
Query: 18 PKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLR 77
P L +R P + S+ T P SD V+++AE LEDS+ S+S PL L LR
Sbjct: 22 PLLRFRRSYAP--VAASVPRTAP--AVSDDLVLRIAEQLEDSVTSTS-----PL-LDPLR 71
Query: 78 DSSSQTLLSTPWPSRKD-EPFRFTDTSMIKSSQIQPITRPSSSLDVST-DAQFPSLVLI- 134
+S+ +LLST WP+R+ E FRFTD S ++S PI+ PS D+ + F S VL
Sbjct: 72 SASALSLLSTRWPTRRSSEAFRFTDISYLRS---LPISLPSREPDLKLPSSPFSSHVLFS 128
Query: 135 DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS----EFQCGDLFWSINGMGAP 190
DG + +S+ G +V +L + G + + EF DLF+ N +GA
Sbjct: 129 DGILVSSS--------GAHVSALADLPPGRARDRAAAALAAAAEFAHKDLFYDFNAVGAR 180
Query: 191 DLGVIYVP--------------------------------------------------AE 200
D+ V++VP E
Sbjct: 181 DVVVVHVPEGVKVADDPIHIMFAYTNSFAESMLMSNPRVLVVAEKSAEVAIVEEHFGAGE 240
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
CYWAN V E++I +G +V HSY+Q+QS AAH KWT V+Q+T S YE VEVSTG KL
Sbjct: 241 EGGCYWANPVAEIIIDEGARVVHSYVQHQSFAAAHTKWTVVQQDTTSKYEFVEVSTGAKL 300
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
+RHN+H++QLGP+TETELS+ HL + Q DLHSRL+LDHPRG+ RQLHKCI A G
Sbjct: 301 NRHNLHIEQLGPETETELSTLHLTSQNKQIHDLHSRLILDHPRGFSRQLHKCI-ACGTGN 359
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS-DLEE 378
++FDGN+KVNRYAQQTDAGQ T+ L+L P+A VNVKPNLQIIADDVKC+HGAAIS +L+
Sbjct: 360 SIFDGNIKVNRYAQQTDAGQETKCLILSPKALVNVKPNLQIIADDVKCTHGAAISGELDP 419
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
++LFYFQARGI+ ETA AL++ FGA VI+R P+ I + ++ K L+ ++
Sbjct: 420 NELFYFQARGINTETATDALLYFFGAHVIKRIPFKQITEKALAQFKELLASS 471
>gi|356495543|ref|XP_003516636.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
[Glycine max]
Length = 382
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 177/304 (58%), Positives = 210/304 (69%), Gaps = 51/304 (16%)
Query: 175 FQCGDLFWSINGMGAPDLGVIYVP------------------------------------ 198
F GDLFWSING+ APDL ++Y+P
Sbjct: 74 FPNGDLFWSINGIAAPDLTLVYIPEGCHVDIPIHLDYMHPPNTTTDAMQLSNPRFLVVVE 133
Query: 199 --AEGN--DCYWANSVLEVVI-----------GKGGKVRHSYLQNQSLNAAHIKWTAVRQ 243
A+ N + + A ++++ + G+G K+ HSY+Q QS +AHIKWT+ Q
Sbjct: 134 KGAQANIIEEFSALKIMKMTLIGVMPAFEAVIGEGAKLTHSYIQTQSFRSAHIKWTSCMQ 193
Query: 244 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 303
E + YEL EVSTGGKL R N+H+QQLGPDT TELS+ HL V DQTQDLHS L+LDHPRG
Sbjct: 194 EDSITYELTEVSTGGKLGRCNLHIQQLGPDTVTELSTLHLSVGDQTQDLHSTLVLDHPRG 253
Query: 304 YCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
Y RQLHKCIV HS GQAVFDGN+KVNRYAQQTDAGQLTRSLLLEP ATVNVK NLQI+AD
Sbjct: 254 YSRQLHKCIVTHSQGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPCATVNVKLNLQIVAD 313
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
DV CSHGA+ISDLEE L YFQARGID ETAR+ LVF+FG EVI++FPY SIR++V S +
Sbjct: 314 DVXCSHGASISDLEEIXLLYFQARGIDXETARRVLVFAFGREVIDKFPYSSIRDRVGSQI 373
Query: 424 KNLM 427
KNL+
Sbjct: 374 KNLL 377
>gi|326520878|dbj|BAJ92802.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 196/451 (43%), Positives = 271/451 (60%), Gaps = 82/451 (18%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 51 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 103
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 104 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 152
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA-------------- 199
+ G + F D+F+ N +GA D+ V++VP
Sbjct: 153 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFA 212
Query: 200 --------------------------------------EGNDCYWANSVLEVVIGKGGKV 221
E CYWAN V+++++ +G +V
Sbjct: 213 YSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARV 272
Query: 222 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 281
HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+TET+LS+F
Sbjct: 273 VHSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTF 332
Query: 282 HLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQL 340
HL + Q DLHSRL+LDHPRG+ RQLHK ++A G +FDGN++VNRYA+QTDAGQ
Sbjct: 333 HLTSQNKQIHDLHSRLILDHPRGFSRQLHK-LIACGTGNGIFDGNIQVNRYARQTDAGQQ 391
Query: 341 TRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS-DLEESQLFYFQARGIDLETARKALV 399
T+ LLL P+A VNVKPNLQIIADDVKC+HGAAIS +L+ ++LFYFQARG+D TA AL+
Sbjct: 392 TKCLLLSPKAVVNVKPNLQIIADDVKCTHGAAISGELDPNELFYFQARGVDANTATDALL 451
Query: 400 FSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
FSFGA+VI R P+ +I + ++ +K L+ +
Sbjct: 452 FSFGAQVINRIPFKAIEKKALAQLKELLAVS 482
>gi|242056569|ref|XP_002457430.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
gi|241929405|gb|EES02550.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
Length = 479
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/472 (44%), Positives = 277/472 (58%), Gaps = 81/472 (17%)
Query: 18 PKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLR 77
P L +R + P VS SD V+++AE LEDS+ S+S PL L LR
Sbjct: 21 PLLRFRRSSAP----VSASVARAAPAVSDDLVLRIAEQLEDSVTSTS-----PL-LDPLR 70
Query: 78 DSSSQTLLSTPWPSRKD-EPFRFTDTSMIKSSQIQPITRPSSSLDVST-DAQFPSLVLI- 134
+S+ +LLSTPWP+R+ E FRFTD S ++S PI+ PS D++ + F S VL
Sbjct: 71 SASALSLLSTPWPTRRSSEAFRFTDISYLRS---LPISLPSREPDLALPSSPFSSHVLFS 127
Query: 135 DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWSINGMGAP 190
DG + +S+ G +V +L + G + + DLF+ N +GA
Sbjct: 128 DGILLSSS--------GAHVSTLADLPPGRARDRAAAALAASAEFAHKDLFYDFNAVGAR 179
Query: 191 DLGVIYVP--------------------------------------------------AE 200
D+ V++VP E
Sbjct: 180 DVVVVHVPEGVKMADDPIHILFAYTNSGAGSMLMSNPRVLVVAEKAAEVAIVEEHFGAGE 239
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
CYWAN V E++I +G +V HSY+Q QS AAH KWT V+Q+T S YE VEVSTG KL
Sbjct: 240 EGGCYWANPVAEIIIDEGARVVHSYVQQQSFAAAHTKWTVVKQDTTSKYEFVEVSTGAKL 299
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
+RHN+H++QLGP+TETELS+ HL + Q DLHSRL+LDHPRG+ RQLHKCI A G
Sbjct: 300 NRHNLHIEQLGPETETELSTLHLTSQNKQIHDLHSRLILDHPRGFSRQLHKCI-ACGTGN 358
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS-DLEE 378
++FDGN+KVNRYAQQTDAGQ T+ L+L P+A VNVKPNLQIIADDVKC+HGAAIS +L+
Sbjct: 359 SIFDGNIKVNRYAQQTDAGQETKCLILSPKALVNVKPNLQIIADDVKCTHGAAISGELDP 418
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
++LFYFQARGI+ ETA AL++ FGA VI+R P+ + + + K L+ ++
Sbjct: 419 NELFYFQARGINTETATDALLYFFGAHVIKRIPFKPVSEKALVQFKELLASS 470
>gi|168064389|ref|XP_001784145.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
gi|162664345|gb|EDQ51069.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
Length = 450
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 257/450 (57%), Gaps = 72/450 (16%)
Query: 46 DPFVIQLAESLEDSLPSS--SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS 103
D F++ LAE LE+S+PS SL L +LR S++ L+ WP+ KDE +RFTD
Sbjct: 1 DFFLLDLAEKLENSVPSEEQGDSLG-ARALAELRYKSAEQALNLRWPTNKDEAYRFTDVR 59
Query: 104 MIKSSQI-----QPITRPS--SSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGS 156
+K+ I QP + P+ S L + F LV +DG I S + L G YVGS
Sbjct: 60 FLKNLDIAPTPAQPASVPNFESELGLGETEAF-RLVFVDGVISESLSKVEGLSGGAYVGS 118
Query: 157 LLGVS----DGIMKRVSDFISEFQCG---DLFWSINGMGAPDLG---------------V 194
+ ++ + + +++ + G DLF +NG+G D G V
Sbjct: 119 VCKITADSAGSALSQALEYLGKPAAGTQDDLFTFLNGLGVQDAGLVFAPKGVQLSKPIHV 178
Query: 195 IY-------------------------VPAEG--------------NDCYWANSVLEVVI 215
+Y V AE + YW N V E+ +
Sbjct: 179 VYYSTGRGGSKDGEEVTSISLATPRLLVVAESGARVEIIEQFVGAPDQVYWTNQVCEIYV 238
Query: 216 GKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTE 275
G +V HS Q Q +A HIK T V Q S Y+LVE GG+LSRHN+ V QLG DT+
Sbjct: 239 ANGAEVSHSCSQEQERSAVHIKQTHVSQVKKSTYKLVEAEVGGRLSRHNLQVIQLGSDTQ 298
Query: 276 TELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQT 335
TE S+F L Q QDLHSRL+LDHPRG RQ+HKCIV H LGQAVFDGNVKVNR+AQQT
Sbjct: 299 TEFSTFSLSSKRQVQDLHSRLVLDHPRGISRQIHKCIVTHRLGQAVFDGNVKVNRFAQQT 358
Query: 336 DAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETAR 395
DAGQL+RSLLL ATVNVKPNLQIIADDVKC+HGAAISDLEE QLFYFQARGID TAR
Sbjct: 359 DAGQLSRSLLLAQGATVNVKPNLQIIADDVKCTHGAAISDLEEEQLFYFQARGIDPLTAR 418
Query: 396 KALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
ALVFSFGAEV++ F ++ ++ VK+
Sbjct: 419 SALVFSFGAEVLQSFGNDYLKKRLERLVKS 448
>gi|357127219|ref|XP_003565281.1| PREDICTED: protein ABCI7, chloroplastic-like [Brachypodium
distachyon]
Length = 572
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 263/447 (58%), Gaps = 84/447 (18%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTDTSM 104
D V+++AE LEDS SS PL L LR +S+ +LLSTPWP+R+ +E FRFTD S
Sbjct: 138 DDLVLRIAEQLEDSASSS------PL-LDPLRSASALSLLSTPWPTRRSNEAFRFTDISY 190
Query: 105 IKSSQIQPITRPSSSLDVST------DAQFPSLVLIDGFI----QNSALNLSNLPDGVYV 154
++S PI+ PS + + D + DG + A L++LP G
Sbjct: 191 LRS---LPISLPSQTPSSAPAPPPSSDLGSSHIRFSDGLLVSATGAHAAALADLPPGQAR 247
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA--------------- 199
+ DLF+ N +G+ D+ V+YVP
Sbjct: 248 DRAAAALAASAEFAHR--------DLFYDFNAVGSSDVAVVYVPEGAKMTDDPVHISFAY 299
Query: 200 EGND-------------------------------------CYWANSVLEVVIGKGGKVR 222
G+D CYWAN V+++V+ +G +V
Sbjct: 300 SGSDGASMMMSNPRVLVIAEKGAEVAIVEEHFGIGEEDDGACYWANPVVDIVVEEGARVV 359
Query: 223 HSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFH 282
HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+T TELS+FH
Sbjct: 360 HSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETITELSTFH 419
Query: 283 LLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLT 341
L + Q DLHSRL+LDHPRGY RQLHK ++A G +FDGN+KVNRYAQQTDAGQ T
Sbjct: 420 LTSQNKQIHDLHSRLILDHPRGYSRQLHK-MIACGTGNGIFDGNIKVNRYAQQTDAGQQT 478
Query: 342 RSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS-DLEESQLFYFQARGIDLETARKALVF 400
+ LLL P+A VNVKPNLQIIADDVKC+HGAAIS DL+ ++LFYFQARG+D++TA AL+F
Sbjct: 479 KCLLLSPKAVVNVKPNLQIIADDVKCTHGAAISGDLDPNELFYFQARGVDVKTATDALLF 538
Query: 401 SFGAEVIERFPYPSIRNQVVSHVKNLM 427
SFGA+VI R P+ + + ++ +K L+
Sbjct: 539 SFGAQVINRIPFKPVEQKALAQLKELL 565
>gi|356507151|ref|XP_003522334.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
[Glycine max]
Length = 401
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/345 (52%), Positives = 223/345 (64%), Gaps = 18/345 (5%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA-QFPSLVL---IDGFIQNSALN 144
WPS DEPFRFTD S I+ T P S P L L ++GF + +
Sbjct: 64 WPSHCDEPFRFTDLSFIRQFSQFICTFPIGDFFCSISGIAAPDLTLAYVLEGFHVDILIQ 123
Query: 145 LSNL--PDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAEGN 202
L N+ P GS D + + + G+ F I A N
Sbjct: 124 LDNMHPPTPTTEGS-----DAMQLFNPRVLIIVEKGEHFNIIEDFLASQ-------ENQN 171
Query: 203 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
D Y N+ E +IG+G K+ HSY+Q S +AAHIKWT++RQE +S YEL +VST GKL R
Sbjct: 172 DSYXRNATFEAMIGQGAKLTHSYIQTXSFHAAHIKWTSIRQEASSTYELTKVSTRGKLGR 231
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 322
HN+++ QLGP T ELS+ HL V DQT DLH+ L+LDHPRGY QLHKCIV HS G+ VF
Sbjct: 232 HNLYIXQLGPYTIIELSTLHLSVDDQTLDLHNTLVLDHPRGYSXQLHKCIVTHSEGEIVF 291
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
DGN+KVNRY Q TDAG LTR+LLLEPRAT+NV+ NL I+ DDVKCSHGAAISDLEES+L
Sbjct: 292 DGNIKVNRYNQXTDAGPLTRNLLLEPRATINVQSNLHIVVDDVKCSHGAAISDLEESKLL 351
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
YFQ GID+ETAR+ LVF+FG+EVI++FPY SIR++V S + NL+
Sbjct: 352 YFQVCGIDIETARRVLVFAFGSEVIDKFPYSSIRDRVYSQIHNLL 396
>gi|115434288|ref|NP_001041902.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|53791281|dbj|BAD52546.1| putative SufD [Oryza sativa Japonica Group]
gi|113531433|dbj|BAF03816.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|215697126|dbj|BAG91120.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 184/442 (41%), Positives = 255/442 (57%), Gaps = 71/442 (16%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTDTS 103
SD V+++AE LEDS+ +SS PL L LR +S+ +LLST WP+R+ +E +RFTD S
Sbjct: 51 SDDLVLRIAEQLEDSVAASS-----PL-LDPLRSASALSLLSTRWPTRRSNEAYRFTDIS 104
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
++S I +R + ++ + DG + +S+ G +V +L + G
Sbjct: 105 YLRSLPISLPSRDAPAVAPPASPYASHVHFSDGVLTSSS--------GAHVSALADLPPG 156
Query: 164 IMK----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA-------------------- 199
++ + F DLF+ N +GA D+ V++VP
Sbjct: 157 HVRDRAAAALAASAGFADKDLFFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGD 216
Query: 200 -----------------------------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 230
E CYWAN V+E+++ + KV HSY+Q QS
Sbjct: 217 GSMMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQQQS 276
Query: 231 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD-QT 289
AAH KWT V+Q T+S YE VEVS G +L+RHN+HVQQLGP+T T+LS+FH + Q
Sbjct: 277 FAAAHTKWTVVQQNTSSNYEFVEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQNKQI 336
Query: 290 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPR 349
DLHS+L+LDHPRG +Q+H+ ++A G +FDGN+KVNRYAQQTDAGQ T+ LLL +
Sbjct: 337 HDLHSKLILDHPRGRSQQIHR-LIASGTGNGIFDGNIKVNRYAQQTDAGQETKCLLLSSK 395
Query: 350 ATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF-QARGIDLETARKALVFSFGAEVIE 408
A VNVKPNLQIIADDVKC+HGAAIS + YF QARGID +TA AL F+FGA VI
Sbjct: 396 ALVNVKPNLQIIADDVKCTHGAAISGEHDPNAIYFLQARGIDAKTAADALNFAFGAHVIN 455
Query: 409 RFPYPSIRNQVVSHVKNLMGTT 430
+ P+ I + ++H K L+ ++
Sbjct: 456 QIPFKPIEKKTLAHFKALLASS 477
>gi|125568868|gb|EAZ10383.1| hypothetical protein OsJ_00219 [Oryza sativa Japonica Group]
Length = 482
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 184/442 (41%), Positives = 255/442 (57%), Gaps = 71/442 (16%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTDTS 103
SD V+++AE LEDS+ +SS PL L LR +S+ +LLST WP+R+ +E +RFTD S
Sbjct: 51 SDDLVLRIAEQLEDSVAASS-----PL-LDPLRSASALSLLSTRWPTRRSNEAYRFTDIS 104
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
++S I +R + ++ + DG + +S+ G +V +L + G
Sbjct: 105 YLRSLPISLPSRDAPAVAPPASPYASHVHFSDGVLTSSS--------GAHVSALADLPPG 156
Query: 164 IMK----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA-------------------- 199
++ + F DLF+ N +GA D+ V++VP
Sbjct: 157 HVRDRAAAALAASAGFADKDLFFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGD 216
Query: 200 -----------------------------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 230
E CYWAN V+E+++ + KV HSY+Q QS
Sbjct: 217 GSMMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQQQS 276
Query: 231 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD-QT 289
AAH KWT V+Q T+S YE VEVS G +L+RHN+HVQQLGP+T T+LS+FH + Q
Sbjct: 277 FAAAHTKWTVVQQNTSSNYEFVEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQNKQI 336
Query: 290 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPR 349
DLHS+L+LDHPRG +Q+H+ ++A G +FDGN+KVNRYAQQTDAGQ T+ LLL +
Sbjct: 337 HDLHSKLILDHPRGRSQQIHR-LIASGTGNGIFDGNIKVNRYAQQTDAGQETKCLLLSSK 395
Query: 350 ATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF-QARGIDLETARKALVFSFGAEVIE 408
A VNVKPNLQIIADDVKC+HGAAIS + YF QARGID +TA AL F+FGA VI
Sbjct: 396 ALVNVKPNLQIIADDVKCTHGAAISGEHDPNAIYFLQARGIDAKTAADALNFAFGAHVIN 455
Query: 409 RFPYPSIRNQVVSHVKNLMGTT 430
+ P+ I + ++H K L+ ++
Sbjct: 456 QIPFKPIEKKTLAHFKALLASS 477
>gi|326509811|dbj|BAJ87121.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 184/233 (78%), Gaps = 3/233 (1%)
Query: 200 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
E CYWAN V+++++ +G +V HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +
Sbjct: 278 EDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGAR 337
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
L+RHN+H+QQLGP+TET+LS+FHL + Q DLHSRL+LDHPRG+ RQLHK ++A G
Sbjct: 338 LNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHSRLILDHPRGFSRQLHK-LIACGTG 396
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS-DLE 377
+FDGN++VNRYAQQTDAGQ T+ LLL P+A VNVKPNLQIIADDVKC+HGAAIS +L+
Sbjct: 397 NGIFDGNIQVNRYAQQTDAGQQTKCLLLSPKAVVNVKPNLQIIADDVKCTHGAAISGELD 456
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
++LFYFQARG+D TA AL+FSFGA+VI R P+ +I + ++ +K L+ +
Sbjct: 457 PNELFYFQARGVDANTATDALLFSFGAQVINRIPFKAIEKKALAQLKELLAVS 509
>gi|159490004|ref|XP_001702979.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158270886|gb|EDO96717.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 482
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 173/405 (42%), Positives = 229/405 (56%), Gaps = 57/405 (14%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR----PSSSLDV-ST 124
P L LR+ S L + P+ ++E +RFTD + + + +QP PS L
Sbjct: 62 PSSLAALREQSKSALATLRMPTTRNEDYRFTDIAPLLRTNVQPAAAGAAVPSELLAAHEL 121
Query: 125 DAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
LV++DG ++ + LS LP G YVG L G + + +++ + G F
Sbjct: 122 PGAAARLVVVDGVLRPELSSGLSGLPAGTYVGPLAGAPEAVKQKLGSLSNSR--GGPFAV 179
Query: 184 INGMGAPDLGVIYVPAE-----------------GNDCYWANS---------------VL 211
+NG P++ V+ VPAE G D AN+ V
Sbjct: 180 LNGSLVPEVLVVAVPAERQLEGPLFVLHLASGATGADEVAANAPRLLLHAGTGSSAELVE 239
Query: 212 EVVIGKGGK-----------------VRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
E V GG+ VRHSY+Q + + H K T V Q S Y L E
Sbjct: 240 EYVALPGGRRYLTVAVGELFLEAAASVRHSYVQREGEGSFHFKSTLVHQAERSQYTLAEA 299
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
S GG ++RH++ +QQ GP+T T++S F L QT DLHSRL LDHP G QLHKCIV+
Sbjct: 300 SVGGAIARHDLVIQQGGPETHTQMSHFLLCGPSQTHDLHSRLTLDHPHGTANQLHKCIVS 359
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
H+ G+ VFDGNVKVNR AQ+TDAGQL+R+LLL P ATVNVKPNLQIIADDVKC+HG A+S
Sbjct: 360 HASGRGVFDGNVKVNRLAQKTDAGQLSRNLLLVPLATVNVKPNLQIIADDVKCTHGCAVS 419
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
DL + +LFYF+ARGI E+AR+ALVFSFGAEVI+R +P ++ +V
Sbjct: 420 DLRDDELFYFRARGISAESARQALVFSFGAEVIQRMGHPVLQKRV 464
>gi|218187437|gb|EEC69864.1| hypothetical protein OsI_00223 [Oryza sativa Indica Group]
Length = 283
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 133/233 (57%), Positives = 171/233 (73%), Gaps = 3/233 (1%)
Query: 200 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
E CYWAN V+E+++ + KV HSY+Q QS AAH KWT V+Q T+S YE VEVS G +
Sbjct: 47 EDGGCYWANPVMEIIVEEDAKVVHSYVQQQSFAAAHTKWTVVQQNTSSNYEFVEVSIGAR 106
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
L+RHN+HVQQLGP+T T+LS+FH + Q DLHS+L+LDHPRG +Q+H+ ++A G
Sbjct: 107 LNRHNLHVQQLGPETNTQLSTFHFSAQNKQIHDLHSKLILDHPRGRSQQIHR-LIASGTG 165
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+FDGN+KVNRYAQQTDAGQ T+ LLL +A VNVKPNLQIIADDVKC+HGAAIS +
Sbjct: 166 NGIFDGNIKVNRYAQQTDAGQETKCLLLSSKALVNVKPNLQIIADDVKCTHGAAISGEHD 225
Query: 379 SQLFYF-QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
YF QARGID +TA AL F+FGA VI + P+ I + ++H K L+ ++
Sbjct: 226 PNAIYFLQARGIDAKTAADALNFAFGAHVINQIPFKPIEKKTLAHFKALLASS 278
>gi|308806105|ref|XP_003080364.1| unnamed protein product [Ostreococcus tauri]
gi|116058824|emb|CAL54531.1| unnamed protein product [Ostreococcus tauri]
Length = 430
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 228/419 (54%), Gaps = 67/419 (15%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVS---TDA 126
L ++ + + L P+ ++E +RFTD S + ++ + P R + D S
Sbjct: 18 LAVKNASEEARALLEGAKAPTTRNEEYRFTDFSALTTAAFVGP--REDARCDASGTKVAE 75
Query: 127 QFPSLVLIDGFIQNSALNLSNLPD-GVYVGSLLGVSD---GIMKRVSDFISEFQCGDLFW 182
+VL+DG + + +L+N GV V +G D G+ V G++F
Sbjct: 76 ACARIVLVDGALDATQSDLTNAAKAGVDV--RVGEGDETTGVQSAVR--------GNVFS 125
Query: 183 SINGMGAPDL--------------------------GVIYVPA----------------- 199
+IN A D+ G + V A
Sbjct: 126 AINSASASDVVVVKVAKGVKCAMPIHIVTLSTGGDSGAMRVSAPRVTIVLEEDAELSVVE 185
Query: 200 ----EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
EG YW N V E+ + KG ++HS +QN +A H + T V Q S YE EVS
Sbjct: 186 DFAGEGETEYWQNGVCEITLAKGASMKHSLIQNHGRSATHTRTTLVTQAEGSRYEANEVS 245
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
GGK +RH+++++QLGP TET L F+L ++QT DLHS++LLDH G QLHKCIV+
Sbjct: 246 VGGKTARHDLNIKQLGPRTETVLGCFNLAGAEQTLDLHSKVLLDHEEGVSDQLHKCIVSA 305
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
+ G+ VFDGNV+VNR+AQ+TDA QL+R+LLL P+ATVNVKPNLQIIADDVKC+HG +SD
Sbjct: 306 ASGRGVFDGNVQVNRFAQRTDAQQLSRNLLLVPKATVNVKPNLQIIADDVKCTHGCTVSD 365
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDVSF 434
LEE +LFY ++RG+ E AR LV FG EVI RFP +R++V + V+N + V F
Sbjct: 366 LEEEELFYIRSRGLSTEIARSLLVSGFGVEVINRFPGKDLRDRVNAMVRNALSRDSVEF 424
>gi|384245333|gb|EIE18827.1| stabilizer of iron transporter SufD [Coccomyxa subellipsoidea
C-169]
Length = 518
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/418 (37%), Positives = 234/418 (55%), Gaps = 39/418 (9%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+A +L S+++ P P++++R + L S P+ ++E +RFTD + I Q++
Sbjct: 96 IARTLAAFRKDSANAQTLPGPMEEMRMDCTVALRSQRMPTTRNEEYRFTDIAPIL--QLE 153
Query: 112 P------ITRPSSSLDVSTDAQ-----FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG- 159
P P ++ +A +V+IDG + + LP L G
Sbjct: 154 PQVAASATVLPGEAIAALVEASPLKEAVARVVVIDGVVARQLSDTDRLPQQGKQARLRGS 213
Query: 160 -----------------VSDGI-------MKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
V +G+ + ++ S L ++ + ++
Sbjct: 214 PFALINGATAEDVLCIDVPEGVSVEGPIHVLYITSGASNVVAPRLLCTLGADSSAEVVEE 273
Query: 196 YV-PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
+V PA+G + ++ N+V E+ + +++H Y+ + A H+K T VRQ S Y+L E
Sbjct: 274 FVGPAKGAEPHFTNAVAEINLADRAQIKHGYVALEGRRALHMKGTLVRQAAQSSYKLTEA 333
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
GG+L+R ++ ++Q G +T+TE+ SF L +Q DLHS+L L+HPRG QLHKCIVA
Sbjct: 334 RLGGRLTRQDLFIEQTGEETQTEMGSFLLCGDEQLHDLHSKLRLEHPRGTANQLHKCIVA 393
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+ VFDG VKV + AQ+TDAGQL+R+LLL PRATVNVKPNLQI+ADDVKC+HG A+S
Sbjct: 394 AGRGRGVFDGAVKVEQKAQKTDAGQLSRNLLLVPRATVNVKPNLQIVADDVKCTHGCAVS 453
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
DLEESQLFYF+ARG+D TARK LV+SFGAEV RF +R ++ + V + + +
Sbjct: 454 DLEESQLFYFRARGVDAATARKVLVYSFGAEVTGRFASAELRARIQNAVDKTLSSVPI 511
>gi|145349023|ref|XP_001418940.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
gi|144579170|gb|ABO97233.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
Length = 383
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/387 (39%), Positives = 217/387 (56%), Gaps = 61/387 (15%)
Query: 90 PSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLIDGFIQNSALNL 145
P+ + E +RFTD +++ ++ + P + +S D S + ++VL+DG + + +
Sbjct: 1 PTNRAEEYRFTDFSALTTATLVGP--KEGASADASATRVEDACATVVLVDGVLDATQSDF 58
Query: 146 SNLPD-GVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDL-------GV--- 194
G+ + +G +D + S G++F +IN A D+ GV
Sbjct: 59 EGAAKAGIKIS--VGAADATTGKQS-----ATRGNVFAAINSASAADVVVVRVPKGVKCA 111
Query: 195 -------------------------IYVPAEGNDC------------YWANSVLEVVIGK 217
I V EG C YW N V E+ + K
Sbjct: 112 SPVHIVTMSTGGENGATRVSAPRITIVVEEEGELCVVEDFAGEGETEYWQNGVCEIAVEK 171
Query: 218 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 277
G ++H+ +QN A H + T V Q S YE+ E+S GGK +RH+++++QLGP TET
Sbjct: 172 GASMKHALIQNHGRGATHTRTTLVTQAEDSKYEVNEISVGGKTARHDLNIKQLGPRTETV 231
Query: 278 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDA 337
L F+L S+QT DLHS+L LDH G Q+HKCIV+ + G+ VFDGNV+VNR AQ+TDA
Sbjct: 232 LGCFNLAGSNQTLDLHSKLQLDHEEGSSNQVHKCIVSAASGKGVFDGNVQVNRMAQRTDA 291
Query: 338 GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKA 397
QL+R+LLL P+ATVNVKPNLQIIADDVKC+HG +SDLEE +LFY ++RG+ ETAR
Sbjct: 292 QQLSRNLLLVPKATVNVKPNLQIIADDVKCTHGCTVSDLEEEELFYIRSRGLSAETARSL 351
Query: 398 LVFSFGAEVIERFPYPSIRNQVVSHVK 424
LV FG +VI R P +R++V S V+
Sbjct: 352 LVSGFGVDVISRLPGKDLRDRVNSIVR 378
>gi|255071939|ref|XP_002499644.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226514906|gb|ACO60902.1| ATP-binding cassette superfamily, partial [Micromonas sp. RCC299]
Length = 406
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 215/404 (53%), Gaps = 63/404 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ---IQPITRPSSSLDVST--DAQ 127
++ LR + ++L P+ + E +RFTD + + +S+ P S T DA
Sbjct: 6 VEALRSRAIESLKRARVPNSRVEDYRFTDLAPLLTSKPVAADPAAASSVDAAAWTLADAD 65
Query: 128 FPSLVLIDGFIQNSALNLS--NLPDGVYVGSL-LGVSDGIMKRVSDFISEFQCGDLFWSI 184
+VL+DG A N++ N DGV V ++ LG S G +S + +F I
Sbjct: 66 ATRVVLVDGAFNADASNVTGANDVDGVVVSTVSLGASSGFAI---GEVSAVRGAGVFAEI 122
Query: 185 NGMGAPDLGVIYVPA------------------------------------EG------- 201
N A D VI VPA EG
Sbjct: 123 NAATASDAVVINVPAGKSLSAPIHIVQLSTSAATKDGEMSSSAPRVAVHVGEGASVSIVE 182
Query: 202 ---------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
+ YW N V E+V+ KG KV H+ +Q Q+ A H + T + Q S Y+L
Sbjct: 183 EFAAAGGSEDGAYWHNGVCELVLEKGAKVTHTMVQAQTRAAVHTRATHLTQAEESEYKLA 242
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
E++ GGKL RH++ V QLGP T TEL+ F+L Q DLHS++ LDH G Q+HKCI
Sbjct: 243 EINVGGKLGRHDLGVTQLGPRTNTELACFNLAGEGQCLDLHSKVTLDHEEGTTDQVHKCI 302
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
V+H+ G+ VFDGNV+VNR AQ+TDAGQ++R+LLL P+ATVNVKPNLQI+ADDV C+HG
Sbjct: 303 VSHASGRGVFDGNVQVNRLAQRTDAGQISRNLLLVPKATVNVKPNLQIVADDVVCTHGCT 362
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+SDLEE LFY Q+RG+ TAR LV FG E++ + + ++
Sbjct: 363 VSDLEEEGLFYLQSRGLSPATARSLLVAGFGLEIVSKVAHDDLK 406
>gi|303277771|ref|XP_003058179.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226460836|gb|EEH58130.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 492
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 166/244 (68%), Gaps = 5/244 (2%)
Query: 196 YVPAEG---NDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
+ PA G + C YW N V E+VI K G+V H+ +Q Q+ NA H + T + Q +S Y L
Sbjct: 247 FAPAPGVSDDACGYWHNGVCEIVIEKDGRVTHAMVQAQTRNAVHTRLTTLTQAESSTYAL 306
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 311
EV+ GGK+ RH++ ++QLGP T TELS F+L + Q DLHS + LDH G Q+HKC
Sbjct: 307 AEVNVGGKIGRHDLGIEQLGPRTVTELSCFNLAGAGQCMDLHSSVTLDHEEGKTDQVHKC 366
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
IV+ + G+ VFDGNVKVN+ AQ+TDAGQ++R+LLL P+ATVNVKPNLQI+ADDV C+HG
Sbjct: 367 IVSSASGRGVFDGNVKVNKLAQRTDAGQISRNLLLVPKATVNVKPNLQIVADDVVCTHGC 426
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP-YPSIRNQVVSHVKNLMGTT 430
+SDLEE +LFY Q+RG+ AR LV FG E++ + P IR++V + VK +
Sbjct: 427 TVSDLEEEELFYIQSRGLSPAVARSLLVAGFGLEIVSKLPGGKDIRDRVGALVKASLDKD 486
Query: 431 DVSF 434
DV
Sbjct: 487 DVQL 490
>gi|147866701|emb|CAN79416.1| hypothetical protein VITISV_000220 [Vitis vinifera]
Length = 164
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/185 (67%), Positives = 140/185 (75%), Gaps = 32/185 (17%)
Query: 243 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 302
Q ++ YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL
Sbjct: 4 QGSSGPYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHL------------------- 44
Query: 303 GYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA 362
S+GQAVFDG +KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA
Sbjct: 45 -------------SVGQAVFDGXIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA 91
Query: 363 DDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSH 422
DDVKCSHGAAISDLEE+QLFYF ARGIDLETARK L+FSFG EVIER PY SIR +V +H
Sbjct: 92 DDVKCSHGAAISDLEENQLFYFLARGIDLETARKXLIFSFGGEVIERLPYSSIRKKVETH 151
Query: 423 VKNLM 427
+K L+
Sbjct: 152 IKALL 156
>gi|302832968|ref|XP_002948048.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
gi|300266850|gb|EFJ51036.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
Length = 492
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 154/215 (71%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y S+ E+ + +V+HSY+Q ++ + H K T V Q S Y + E S G ++RH+
Sbjct: 260 YLTVSMAELFLEPAAEVKHSYVQREAAGSFHFKGTLVHQAERSRYTVTEASVGAAIARHD 319
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
+ + Q GP+T TE+ F L +Q DLHSRL LDHP G QLHKCIV+H+ G+ VFDG
Sbjct: 320 LTILQGGPETHTEMGHFLLCGPNQLHDLHSRLQLDHPHGTANQLHKCIVSHASGRGVFDG 379
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
NVKVNR AQ+TDAGQL+R+LLL P ATVNVKPNLQIIADDVKC+HG A+SDL + +LFYF
Sbjct: 380 NVKVNRAAQKTDAGQLSRNLLLVPLATVNVKPNLQIIADDVKCTHGCAVSDLRDEELFYF 439
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+ARGI E AR+ALVFSFG+EV++R ++ +V
Sbjct: 440 RARGISAEAARQALVFSFGSEVVQRMGRQALAKRV 474
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP---SSSLDVSTDA 126
P L LR++S+ L + P+ ++E +RFTD S + + ++P +S L TD
Sbjct: 59 PPGLVTLREASTGALATLRMPTTRNEEYRFTDISPLLKTAVEPAAPGAVVTSELLQRTDL 118
Query: 127 --QFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
V++DG +++ L++LP GVYVG L G S +++++ + G F
Sbjct: 119 PDAAVVAVVVDGVLRSELCRGLADLPKGVYVGPLEGASAAVVEKLGSLSNSR--GGPFAV 176
Query: 184 INGMGAPDLGVIYVPAE 200
+NG P GV+ V AE
Sbjct: 177 LNGSLTP--GVLVVAAE 191
>gi|428318184|ref|YP_007116066.1| Iron-regulated ABC transporter permease protein SufD [Oscillatoria
nigro-viridis PCC 7112]
gi|428241864|gb|AFZ07650.1| Iron-regulated ABC transporter permease protein SufD [Oscillatoria
nigro-viridis PCC 7112]
Length = 444
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 214/398 (53%), Gaps = 63/398 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS----------SLDV 122
L LRD ++Q +LS+ +P+ KDE +RFTD S + QI P+ P S ++ V
Sbjct: 35 LDDLRDIAAQYVLSSHFPTVKDEEWRFTDLSPLL--QI-PLHLPESNQPEIKLSDITMPV 91
Query: 123 STDAQFP-SLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCG 178
A P LV ++GF S +NL NLP Y G+L V + R+SD +S+ Q
Sbjct: 92 KDRADLPLRLVFVNGFYAPHLSTVNLPNLPLDFYAGNLSNVPEKYQGRISDVLSKHRQQT 151
Query: 179 DLFWSINGMGAPDLGVIYVPAE-------------------------------------- 200
++F ++N G D V++VPA
Sbjct: 152 EVFTALNTAGLTDSAVVFVPANMSIDLPIHLLFLTAPGASPTMSQPHCSVIAEPGSNVTL 211
Query: 201 -------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
GN + N+V +V++G+ V H LQ ++ HI +A+ Q S Y
Sbjct: 212 VEDYATIGNVAAFTNAVTDVLVGENATVNHVRLQREAGEVVHIGKSAIEQSRNSRYTCHA 271
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
+S GGK+SRHN+ V Q G T+T L+ + +Q D HS + +HP G RQLHKCIV
Sbjct: 272 ISLGGKISRHNLEVFQRGEATKTTLNGLSVAFGEQLSDTHSVIDFNHPHGTSRQLHKCIV 331
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ +AVF+G V V + AQ TDAGQL+R+LLL PRA V+ KP L+I+AD+VKCSHGA +
Sbjct: 332 GNK-ARAVFNGKVFVRKAAQLTDAGQLSRNLLLSPRARVDTKPQLEIVADNVKCSHGATV 390
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
S LE+ +LFY Q+RG+DLE +R L+ +F AE++ + P
Sbjct: 391 SQLEDDELFYLQSRGLDLERSRYLLIDAFAAEMLNQLP 428
>gi|412991263|emb|CCO16108.1| FeS assembly protein SufD [Bathycoccus prasinos]
Length = 527
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 146/203 (71%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
YWAN V+E+ + + +V HS Q+ A H + T VRQ +S YE+ EV+ G KL RH+
Sbjct: 294 YWANDVVEIHLAENARVFHSLSQDHGREAVHTRATYVRQNESSMYEINEVNVGAKLHRHD 353
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
+ V+QLG T+T+L+ F+L S QTQDLHS ++LD G Q H+CIV+ S G+ VFDG
Sbjct: 354 LRVKQLGKKTDTKLNCFNLAGSKQTQDLHSAIILDFEEGTTDQRHRCIVSSSSGKGVFDG 413
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
NV+VN+ AQ+TDA Q+TR+LLL P+ATVN +PNLQIIADDVKC+HG +SDLEE +LFY
Sbjct: 414 NVRVNKLAQRTDAKQITRNLLLVPKATVNARPNLQIIADDVKCTHGCTVSDLEEEELFYI 473
Query: 385 QARGIDLETARKALVFSFGAEVI 407
Q+RG+ E AR LV FG E+I
Sbjct: 474 QSRGLTKEIARSLLVSGFGTEII 496
>gi|75906651|ref|YP_320947.1| FeS assembly protein SufD [Anabaena variabilis ATCC 29413]
gi|75700376|gb|ABA20052.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
variabilis ATCC 29413]
Length = 454
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 214/414 (51%), Gaps = 60/414 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP--- 129
LQ+LR+ ++ + + P+ ++E +RFTD S ++ + ++ DV +
Sbjct: 45 LQELRERATNWVRHSVIPNTREEEWRFTDLSALRRVEFHH----AAHTDVEKLHEMSLRG 100
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSI 184
LV ++G N++NLP G+ VG+L + +RV ++++ + ++F ++
Sbjct: 101 TGDNGLVFVNGVYTPELSNIANLPTGIVVGNLSALPITEQERVQKYLAQSEGALEVFTAL 160
Query: 185 NGMGAPDLGVIYV----------------------------------------------- 197
N G D+ V+ V
Sbjct: 161 NTAGISDVAVVLVAKNVIVETPIHLLFVSVADETATISQPRCLVVAESGSQVSVVEEFVT 220
Query: 198 PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
P Y N+V E+ I +V H+ ++N+S A HI TAV Q S Y ++ G
Sbjct: 221 PNADEGVYLTNAVTEITIADNAQVVHTRIENESKQAFHIGKTAVTQGRYSRYTCHAITLG 280
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 317
GK+SRHN+ + Q G TET L+ ++ S+Q D HS + L+HP G +QLHKCIV
Sbjct: 281 GKISRHNLEILQTGEQTETTLNGLTMIASNQLADTHSAIALNHPYGTSKQLHKCIVGDR- 339
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
AVF+G V V + AQ TDA QL R+LLL +A V+ KP L+I AD+VKC+HGA +S LE
Sbjct: 340 AHAVFNGKVFVPKPAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLE 399
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
+ ++FY Q+RGID ARK LV +F AE+I + P PS+RN++++ V + T+
Sbjct: 400 DDEIFYLQSRGIDANDARKLLVNAFAAEIINQIPVPSLRNKLLTTVTSFKSLTN 453
>gi|427719480|ref|YP_007067474.1| iron-regulated ABC transporter permease SufD [Calothrix sp. PCC
7507]
gi|427351916|gb|AFY34640.1| Iron-regulated ABC transporter permease protein SufD [Calothrix sp.
PCC 7507]
Length = 459
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 216/411 (52%), Gaps = 53/411 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
LQ++R ++ + + P+ ++E +RFTD S ++ Q T +S+ D+ +A
Sbjct: 45 LQEVRQHATNWVRHSTIPTTREEEWRFTDLSSLRKVQFNVETGKFTSVQPDILPEAANSR 104
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGA 189
LV ++G +++LP G+ VG+L ++ I KRVS ++++ + ++F ++N G
Sbjct: 105 LVFVNGVYAPELSAIADLPPGIVVGNLTELTVDIQKRVSQYLAQAEGAQEVFTALNTAGL 164
Query: 190 PDLGVIYV-------------------------------------------------PAE 200
D V+ V E
Sbjct: 165 TDAAVVLVDKNVAVETLIHLVFMTVAGETATISQPRCLVVAESGSSVTLVEEYRNFSSTE 224
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
Y N+V E+ + + +V H+ + +S A HI TAV Q S Y ++ GGKL
Sbjct: 225 KEGVYLTNAVTEIWLAENAQVSHTRVVRESAEAFHIGKTAVTQARDSRYSSHAITLGGKL 284
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
SRHN+ + Q G TET L+ ++ Q D HS + L+HP G +QLHKCIV A
Sbjct: 285 SRHNLEILQTGEQTETTLNGLTMIWERQLGDTHSAIALNHPYGVSQQLHKCIVGDR-AHA 343
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+G V V + AQQT+AGQL R+LLL +A V+ KP L+I AD+VKC+HGA +S LE+ +
Sbjct: 344 VFNGKVFVPKPAQQTNAGQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDE 403
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
+FY Q+RGID + ARK L+ +F AE+I + P PS+R +++ V +L T+
Sbjct: 404 IFYLQSRGIDEDAARKLLINAFAAEIINQVPIPSLREILLTTVNSLKSLTN 454
>gi|334120519|ref|ZP_08494599.1| FeS assembly protein SufD [Microcoleus vaginatus FGP-2]
gi|333456497|gb|EGK85129.1| FeS assembly protein SufD [Microcoleus vaginatus FGP-2]
Length = 454
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 213/410 (51%), Gaps = 77/410 (18%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS----------LDV 122
LQ LR++++Q +LS+ +P+ +DE +RFTD S + QI P P S+ + V
Sbjct: 35 LQDLREAATQYVLSSSFPTVRDEEWRFTDLSSVL--QI-PFHIPQSNQSKVKLADIIMPV 91
Query: 123 STDAQFP-SLVLIDGF-------IQNSALNLSNLPDG-------VYVGSLLGVSDGIMKR 167
P LV ++GF +++S NLP Y G+L V + R
Sbjct: 92 KNRDDLPLRLVFVNGFYAPDLSTVESSVF--PNLPLAEPSKRIDFYAGNLSNVPEKYQGR 149
Query: 168 VSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAE-------------------------- 200
+SD +S+ Q ++F ++N G D V++VPA
Sbjct: 150 ISDVLSKHRQQTEVFTALNTAGLADSAVVFVPANMSIDLPIHLLFLTAPGASPTMSQPHC 209
Query: 201 -------------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 241
GN + N+V +VV+G+ V H LQ + HI +A+
Sbjct: 210 LVIAEPGSNVTLVEDYATIGNVAAFTNAVTDVVVGENATVNHVRLQREGGEVVHIGTSAI 269
Query: 242 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 301
Q S Y +S GGK+SRHN+ V Q G TET L+ + +Q D HS + +HP
Sbjct: 270 EQSRNSRYTCHAISLGGKISRHNLEVFQRGEATETTLNGLTVAFGEQLSDTHSLIDFNHP 329
Query: 302 RGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 361
G RQLHKCI+ + +AVF+G V V + AQ TDAGQL+R+LLL PRA V+ KP L+I+
Sbjct: 330 HGTSRQLHKCIIGNK-ARAVFNGKVFVRKAAQLTDAGQLSRNLLLSPRARVDTKPQLEIV 388
Query: 362 ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
AD+VKCSHGA +S LE+ +LFY Q+RG+DLE +R L+ +F AE++ + P
Sbjct: 389 ADNVKCSHGATVSQLEDDELFYLQSRGLDLERSRYLLIDAFAAEILNQLP 438
>gi|17229986|ref|NP_486534.1| hypothetical protein alr2494 [Nostoc sp. PCC 7120]
gi|17131586|dbj|BAB74193.1| alr2494 [Nostoc sp. PCC 7120]
Length = 453
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 218/410 (53%), Gaps = 53/410 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-ITRPS--SSLDVSTDAQFP 129
LQ+LR S++ + + P+ ++E +RFTD S ++ + Q +P+ S+L +S +A
Sbjct: 45 LQELRGSAANWVRHSTIPTTREEEWRFTDLSALRRVEFQQGEVKPADISALSLS-EAANN 103
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMG 188
LV ++G +++LP G+ V +L + +RV ++++ + ++F ++N G
Sbjct: 104 RLVFVNGVYAPDLSAVADLPPGIVVDNLSALPITEQERVQKYLAQSEGALEVFTALNTAG 163
Query: 189 APDLGVIYV-----------------------------------------------PAEG 201
D+ V+ V P
Sbjct: 164 ISDVAVVLVAKNVIVETPIHLVFIAVAGETATISQPRCLVVAESGSQVSVIEEFVTPNVD 223
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
Y N+V E+ I +V H+ ++N+S A HI TAV Q S Y V+ GGK+S
Sbjct: 224 EGVYLTNAVTEITIADNAQVVHTRVENESKQAFHIGKTAVTQARYSRYTCHAVTLGGKIS 283
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
RHN+ + Q G TET L+ ++ ++Q D HS + L+HP G +QLHKCIV AV
Sbjct: 284 RHNLEILQTGEQTETTLNGLTMVATNQLADTHSAIALNHPYGTSKQLHKCIVGDR-AHAV 342
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G V V + AQ TDA QL R+LLL +A V+ KP L+I AD+VKC+HGA +S LE+ ++
Sbjct: 343 FNGKVFVPKPAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDEI 402
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
FY Q+RGID ARK LV +F AE+I + P PS+R+++++ V + T+
Sbjct: 403 FYLQSRGIDANDARKLLVNAFAAEIINQIPVPSLRDKLLNTVTSFKSLTN 452
>gi|434397830|ref|YP_007131834.1| Iron-regulated ABC transporter permease protein SufD [Stanieria
cyanosphaera PCC 7437]
gi|428268927|gb|AFZ34868.1| Iron-regulated ABC transporter permease protein SufD [Stanieria
cyanosphaera PCC 7437]
Length = 444
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 217/427 (50%), Gaps = 51/427 (11%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
SDPF++++ + S+P L+ LR+ S+ + +PS+KDE +RFTD S
Sbjct: 15 SDPFLLKILQQ-RSSVPKEKLDSETSTWLENLREQSASWVSRLKFPSKKDEEWRFTDLSS 73
Query: 105 IKS---SQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
+ + + T S ++D+ +A +V ++G N S LP G+YVG+L +
Sbjct: 74 LLDLDFTAAKSGTVESDTIDLIPEATESRIVFVNGLYAPELSNTSGLPKGIYVGNLTNLP 133
Query: 162 DGIMKRVSDFISEFQCG--DLFWSINGMGAPDLGVIY----------------------- 196
+ K ++ Q G ++F S+N D+ +I+
Sbjct: 134 EAYCKYFRPYLGT-QAGAEEVFTSLNTASITDVAIIWAAPNTVVEQPIHLLFISVTEDSI 192
Query: 197 --------VPAE------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
+ AE G Y N+V E+ +G+ ++ H+ Q +S A HI
Sbjct: 193 SFSQPRSWIVAEKNCSLNIIEEYTGQSSYLTNAVTEIWLGENAQINHTRFQTESETAYHI 252
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
TAV Q AS Y L E + GGK+SRHN + Q G TET L+ + +QT D HS +
Sbjct: 253 GKTAVSQARASRYTLTEFNFGGKISRHNPEISQQGEQTETYLNGLTVANGEQTADTHSII 312
Query: 297 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
L P G QLHKC+V+ +F+G V V + AQ T+A QL R+LLL P+A V+ KP
Sbjct: 313 ALSKPHGTTNQLHKCLVSDR-AHTIFNGKVFVPKAAQLTNAAQLNRNLLLSPKARVDTKP 371
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
L+I AD+VKCSHGA +S LE ++FY ++RG+ + AR+ L+ F AE+IER S+
Sbjct: 372 ELRITADNVKCSHGATVSQLEAEEIFYLRSRGLTEDNARQLLINGFTAEIIERISLKSLS 431
Query: 417 NQVVSHV 423
++ + V
Sbjct: 432 TKIATIV 438
>gi|443311377|ref|ZP_21041006.1| FeS assembly protein SufD [Synechocystis sp. PCC 7509]
gi|442778574|gb|ELR88838.1| FeS assembly protein SufD [Synechocystis sp. PCC 7509]
Length = 444
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 210/405 (51%), Gaps = 54/405 (13%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST----DA 126
L LQ+LRD +S + P+ +DE +RFTD S ++ T P +D+S+ +A
Sbjct: 37 LLLQELRDRTSSIINLATLPTTRDEEWRFTDLSALRQLNFSENTSPQ--IDISSLILPEA 94
Query: 127 QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSIN 185
+ LV ++G + +++LPDG+ V +L G+ ++ ++++ Q ++F ++N
Sbjct: 95 ENSRLVFVNGVYTSELSRVADLPDGITVSNLAGLPITHRSKIKKYLAQQQGATEVFTALN 154
Query: 186 GMGAPDLGVIYV----------------------------------------------PA 199
G D+ +++V
Sbjct: 155 TSGISDVAIVWVGKNVVVDTPIHLLFVSTSEQPIVSQPRCLLVAESGSNVTVVEEYKKAG 214
Query: 200 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
+ Y+ NSV E+ + + +V H+ ++ +SL A HI TAV Q S Y VS GGK
Sbjct: 215 SADTVYFTNSVTEIWLEENAEVSHTRIEQESLEAFHIGKTAVSQARDSRYTCYAVSLGGK 274
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
LSRHN+ V Q G T+T L + +Q D HS + L++P G QLHKCIV+
Sbjct: 275 LSRHNLEVFQAGEQTDTNLFGLTAISGNQVGDTHSAIALNYPHGTTNQLHKCIVSEK-SH 333
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
VF+G V V + AQ T+A QL R+LLL RA ++ KP L+I AD+VKCSHGA +S LE+
Sbjct: 334 GVFNGKVFVPKPAQLTNAAQLNRNLLLSSRARIDTKPQLEITADNVKCSHGATVSQLEDD 393
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
++FY Q+RGI+ AR LV +F AE+I + P S+R + + +K
Sbjct: 394 EIFYLQSRGINASDARNLLVNAFAAEIINKLPIDSLRESLNASIK 438
>gi|443326002|ref|ZP_21054671.1| FeS assembly protein SufD [Xenococcus sp. PCC 7305]
gi|442794383|gb|ELS03801.1| FeS assembly protein SufD [Xenococcus sp. PCC 7305]
Length = 435
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 207/396 (52%), Gaps = 46/396 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSL 131
LQ +R+ S+ + P+ KDE +RFTD +S++ + P + + +A+ L
Sbjct: 39 LQTIREQSASWVSKLTLPTTKDEEWRFTDISSLLDREFVAPKSFTTDKNITIPEAEDTRL 98
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
V ++G N+S LP G+YVGSL + + + F+ + +F S+N
Sbjct: 99 VFVNGSYAAELSNISGLPQGIYVGSLTNLPENFCQYFRPFLGTLPGKEEVFTSLNTASIA 158
Query: 191 DLGVIY-------------------------------VPAEGN------------DCYWA 207
D+ +I+ + AE N Y
Sbjct: 159 DVAIIWAAPNTVVEKPIHLVFVSVAGESITISQPRGWIVAEKNCQLTIVEEYSGASSYIT 218
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V E+ +G+ ++ H+ LQ +S+ A HI TAV Q+ S Y L E++ GG++SRH+ +
Sbjct: 219 NAVTEIWLGENAQINHTRLQQESVTAYHIGKTAVNQKQDSRYTLTEINVGGQISRHSPEI 278
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
Q G TET L+ + +QT D HS + L+HP G QLHK IV+ A+F+G V
Sbjct: 279 HQAGAQTETNLNGLTIAKEEQTSDTHSVINLNHPHGTTDQLHKTIVSDR-AHAIFNGKVS 337
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ T+A QL R+LLL P+A VN KP LQI AD+VKCSHGA +S LE ++FY ++R
Sbjct: 338 VPKPAQLTNASQLNRNLLLSPKARVNTKPELQITADNVKCSHGATVSQLEADEVFYLRSR 397
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
G+ AR+ L+ +F E+IER P S++ ++ S +
Sbjct: 398 GLTENDARQLLIDAFVNEIIERVPIKSMQQKIQSSI 433
>gi|427731168|ref|YP_007077405.1| FeS assembly protein SufD [Nostoc sp. PCC 7524]
gi|427367087|gb|AFY49808.1| FeS assembly protein SufD [Nostoc sp. PCC 7524]
Length = 457
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 206/405 (50%), Gaps = 55/405 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI-TRPSSSLDVST----DAQ 127
LQ+LRD ++ + + P+ ++E +RFTD S + + + T P++SLD++ ++
Sbjct: 45 LQELRDRAANWVRHSTIPTTREEEWRFTDLSALCQVEFNHVETLPATSLDITGLTLPESH 104
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSING 186
+ LV ++G +++LP G+ VG+L + +RV +++ + ++F ++N
Sbjct: 105 YSRLVFVNGVYSPELSAVADLPAGIVVGNLTTLPLTEQERVQQHLAQAEGALEVFTALNT 164
Query: 187 MGAPDLGVIYV------------------------------------------------P 198
G D+ V+ V P
Sbjct: 165 AGISDVAVVLVAKNLVVETPIHLLFITVAGETATISQPRCLVVAESGSQVSVIEDYVTIP 224
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
Y N+V E+ I V H ++ S A HI TAV Q S Y ++ G
Sbjct: 225 QREETVYLTNTVTEIAIADNAHVTHIRVERDSQAAFHIGKTAVTQARYSRYSCHAITLGA 284
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
KLSRHN+ + Q G TET L+ ++ +Q D HS + L+HP G +QLHKCIV
Sbjct: 285 KLSRHNLEILQTGEQTETTLNGLTMIAGNQVADTHSAIALNHPYGTSKQLHKCIVGDR-A 343
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
AVF+G V V + AQ TDA QL R+LLL +A V+ KP L+I AD+VKC+HGA +S LE+
Sbjct: 344 HAVFNGKVFVPKPAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLED 403
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++FY Q+RGID ARK LV +F E+I P S+R Q+++ V
Sbjct: 404 DEIFYLQSRGIDANDARKLLVNAFATEIINHIPVASLREQLLNTV 448
>gi|307152986|ref|YP_003888370.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
gi|306983214|gb|ADN15095.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
Length = 449
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 211/405 (52%), Gaps = 62/405 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ++R ++ T+ P++KDE +RFTD S ++ T + + D P
Sbjct: 39 LQQIRQQATATVGQLALPTKKDEEWRFTDISELQQQNFSAATPVNLTADSIKSFILPETA 98
Query: 131 ---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI-SEFQCGDLFWSING 186
LV ++GF NLS LP+GV VG+L + +++S ++ + + ++F ++N
Sbjct: 99 NSILVFVNGFYAPELSNLSALPEGVKVGNLASIP---TEKISVYLGKQNEQTEIFSALNT 155
Query: 187 MGAPDLGVIY-------------------------------VPAEG-------------- 201
G D+ V++ V AE
Sbjct: 156 AGLTDVAVVWTEAGVTVDSSIQLLFLTVKTETPIFTQPRVLVVAEKHSSLQIIEDYRVIT 215
Query: 202 NDC-------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
N C Y+ NSV E+ + + +V HS +Q ++ + HI + + Q+ S Y + E+
Sbjct: 216 NSCSHLSDNTYFTNSVTEIWLEENAQVNHSRIQREAGKSFHIAKSTIAQKRDSNYTINEI 275
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
+ GGKL RHN+ + Q G T+T L+ ++ Q D HS + L+HP G QLHKCI+
Sbjct: 276 NFGGKLYRHNLEIFQQGEQTQTTLNGLTIIGDKQVSDTHSAVYLNHPYGTTNQLHKCIID 335
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
HS A+F+G V V + AQ T+A QL R+LL+ P+A VN KP LQI AD+VKCSHGA +S
Sbjct: 336 HS-AHAIFNGKVFVPKPAQMTNAAQLNRNLLISPKARVNTKPELQITADNVKCSHGATVS 394
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LE +LFY ++RG+ E AR L+ +F A++I+R P S+R ++
Sbjct: 395 QLEADELFYLRSRGLTEEDARHLLIDAFAADIIDRIPVHSLRQRL 439
>gi|186684918|ref|YP_001868114.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
gi|186467370|gb|ACC83171.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
Length = 457
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 213/414 (51%), Gaps = 56/414 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ--IQPITRPSSSLDVSTDAQFPS 130
LQ+LR S++ + + P+ ++E +RFTD S ++ Q I+ + S D+ +A
Sbjct: 44 LQELRQSAANWVRHSIIPTTREEEWRFTDLSSLRKVQFNIETVNYASLEFDILPEAANSR 103
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGA 189
LV ++G +S+LP G+ V +L G+S + V F+++ + ++F ++N G
Sbjct: 104 LVFVNGVFAPELSAVSDLPSGIVVSNLAGLSVLEQEGVRQFLAQAEGAQEVFTALNTAGI 163
Query: 190 PD---------------LGVIYVP------------------------------------ 198
D + ++++
Sbjct: 164 TDAAVVWVKKNVVVETPIHLVFISVVGETATISQPRCLVVAESGSEVTLVEEYTNRRGAE 223
Query: 199 -AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
AE Y+ N+V EV +G +V H+ ++ + A HI TA+ Q S Y ++ G
Sbjct: 224 SAEKEGVYFTNAVTEVWVGDNAQVSHTRVEQEGAEAFHIGKTAIAQARDSRYTCHAITLG 283
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 317
KLSRHN+ + Q G T+T L+ ++ Q D HS + L++P G QLHKCIV
Sbjct: 284 AKLSRHNLEILQTGEQTQTTLNGLTIISGKQLSDTHSAIALNYPHGTSDQLHKCIVGDR- 342
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
AVF+G V V + AQ T+A QL R+LLL +A V+ KP L+I AD+VKC+HGA +S LE
Sbjct: 343 AHAVFNGKVFVPKLAQLTNASQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLE 402
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
+ ++FY Q+RGID ARK L+ +F AEVI + P PS+R +++ V NL T+
Sbjct: 403 DDEIFYLQSRGIDENDARKLLINAFAAEVINQIPIPSLREILLNTVNNLKSLTN 456
>gi|428215690|ref|YP_007088834.1| FeS assembly protein SufD [Oscillatoria acuminata PCC 6304]
gi|428004071|gb|AFY84914.1| FeS assembly protein SufD [Oscillatoria acuminata PCC 6304]
Length = 457
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 220/443 (49%), Gaps = 66/443 (14%)
Query: 40 PQATFSDPFVIQLAESLEDSL-PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFR 98
PQ ++ D + Q S + P+ + P LQ++RD+++ + P+RKDE +R
Sbjct: 9 PQVSYLDELLKQAVASPAPVVNPAYGMAPPTAALLQQVRDNAATWVRELAMPTRKDEEWR 68
Query: 99 FTDTSMIKSSQIQPITRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDG 151
TD S +++ Q P ++ + A F LV ++G N+S LP+G
Sbjct: 69 VTDLSGLQALTFQ--AAPPEAIPTTGVAPFELPEMLDSRLVFVNGCYSAELSNVSGLPEG 126
Query: 152 VYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGAPDLGVI--------------- 195
++VG+L + + ++ ++ ++F S+N G D V+
Sbjct: 127 IFVGNLGQLPPSLQTQLPKYLGNVDGNKEVFTSLNTAGLMDAAVVWIAKDVAVDKPIHLL 186
Query: 196 -------------------------------YVPAEGNDC--------YWANSVLEVVIG 216
YV A+ + C Y+ N+V E+ +
Sbjct: 187 FMAVPGAQPRLVQPRCLIVAERGSRCTAIEEYVVADDDSCGNFKGNAPYFTNAVTEIWVA 246
Query: 217 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 276
+ +V H+ +Q +S N+ HI TA+ Q S Y VSTGG LSRH++ V Q G T T
Sbjct: 247 ETAQVTHAKIQRESTNSFHIGKTAIAQAKDSNYSCTAVSTGGLLSRHHLEVYQQGEGTYT 306
Query: 277 ELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTD 336
L+ + Q D HS ++L+HP G +QLHKCI+ + Q VF+G V V + AQ TD
Sbjct: 307 TLNGLAIAAGKQVSDTHSAIVLNHPNGTSKQLHKCIIDDA-AQGVFNGKVFVPKPAQLTD 365
Query: 337 AGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARK 396
A QL R+LLL P+A V+ KP L+I AD+VKCSHGA IS LEE +LFY ++RG+D +R
Sbjct: 366 ASQLNRTLLLSPKARVDTKPQLEITADNVKCSHGATISQLEEDELFYLRSRGLDPAMSRS 425
Query: 397 ALVFSFGAEVIERFPYPSIRNQV 419
L+ F E+++ P +++ ++
Sbjct: 426 LLIDGFAGEILQELPSGALQTKI 448
>gi|428218175|ref|YP_007102640.1| iron-regulated ABC transporter permease SufD [Pseudanabaena sp. PCC
7367]
gi|427989957|gb|AFY70212.1| Iron-regulated ABC transporter permease protein SufD [Pseudanabaena
sp. PCC 7367]
Length = 484
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 207/416 (49%), Gaps = 75/416 (18%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-MIKSSQIQPITRPSSSL----------- 120
LQ +R + L+ P +K E +++TD S ++K S + + +P L
Sbjct: 56 LQSIRQEAQTLLVDQELPHKKQEEWKYTDLSAVLKRSYV--LRKPQECLLDALENPGFEK 113
Query: 121 ----DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS-----DGIMKRVSDF 171
+ +A LV ++G L +LP+GV VGSL + + + +R+++F
Sbjct: 114 LIAGQIVPEAARSLLVFVNGVFSPQLSGLIDLPEGVIVGSLAQLCADCLPEKVQQRLAEF 173
Query: 172 ISEF-QCGDLFWSINGMGAPDLGVIYVP-------------------------------- 198
++E D F ++N D+ + YVP
Sbjct: 174 LAELTDADDFFANLNAACLSDVAIAYVPKNVVIDQPIQFVYAVTPRSAQTANISVISQPR 233
Query: 199 ------------------AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 240
E + Y +NSV E+++G+ V H+ +Q + A HI TA
Sbjct: 234 CLVVAETGSSMTLVETYVGEPDRSYLSNSVAEIMVGENAAVNHTKVQWEGHAACHISTTA 293
Query: 241 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 300
+ QE S Y +STG K+SRHN+ VQQ TET L+ + D+ D HS + ++
Sbjct: 294 IAQERDSRYTCNAISTGAKISRHNLQVQQWAGQTETHLNGLAYIDGDRLTDTHSAIAHNY 353
Query: 301 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQI 360
G QLHKCIV +A+F+G ++V + AQQTD+ QL+R+LLL +A V+ KP L+I
Sbjct: 354 AHGSSNQLHKCIV-DDRARAIFNGKIQVRQAAQQTDSSQLSRNLLLSDKARVDTKPQLEI 412
Query: 361 IADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+AD+VKC+HGA +S L+ ++FY Q+RGID +A L F+F AEVI+R P P +R
Sbjct: 413 VADNVKCAHGATVSQLDADEIFYLQSRGIDAASAANMLTFAFAAEVIQRIPIPRLR 468
>gi|443318075|ref|ZP_21047358.1| FeS assembly protein SufD [Leptolyngbya sp. PCC 6406]
gi|442782319|gb|ELR92376.1| FeS assembly protein SufD [Leptolyngbya sp. PCC 6406]
Length = 451
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 202/425 (47%), Gaps = 53/425 (12%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-IT 114
L+ L ++ + +P+ LPL LR + +PS +DE +RFTD S + + QP T
Sbjct: 28 LQALLATAQAGVPESLPLTALRTQAIAIAQEQGFPSTRDEDWRFTDLSSLIAVPFQPPTT 87
Query: 115 RPSSSLDVSTDAQFPS----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSD 170
P+ Q P LV I+G + + LP+GV VGSL + + + D
Sbjct: 88 MPTVKATALAAVQLPEVSARLVFINGQFSAALSSTETLPNGVAVGSLAQLHNSPLGDQID 147
Query: 171 FISEFQCG--DLFWSINGMGAPDLGVIYVP------------------------------ 198
G DLF ++N G D V++V
Sbjct: 148 VRLGHAGGQQDLFSALNTAGFQDGAVVWVSQFQTVAAPIQILYLSIPQDQPIVSYPRCLV 207
Query: 199 ---------------AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 243
G + SV EV + +V H LQ + HI TAV Q
Sbjct: 208 VAEAASTLTLIEDFYGTGTGDHLNTSVTEVWVDDTAQVNHVRLQREGSGTFHIGKTAVSQ 267
Query: 244 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 303
S Y +S G +LSRHN+ V Q GP T TEL + Q D HS L L HP G
Sbjct: 268 GRDSRYVTTAISLGARLSRHNLEVTQRGPQTHTELHGLSAIADTQLADTHSLLALTHPHG 327
Query: 304 YCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
Q HKCI+ AVF+G V+V+R AQ T+A Q+ R+LLL +A V+ KP L I+AD
Sbjct: 328 TAEQRHKCII-DGRAHAVFNGKVEVSRTAQHTNASQINRNLLLSDKARVDTKPELDIVAD 386
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+VKC+HGA +S L++ +LFY Q+RGI+ E A+K L++ F ++I P P++R+ +++ V
Sbjct: 387 NVKCAHGATVSQLDDDELFYLQSRGINAEEAQKLLIYGFAMDIIHTIPIPALRDDLMAAV 446
Query: 424 KNLMG 428
M
Sbjct: 447 VKAMA 451
>gi|218441630|ref|YP_002379959.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
gi|218174358|gb|ACK73091.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
Length = 454
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/407 (32%), Positives = 208/407 (51%), Gaps = 65/407 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLD--VSTDAQ 127
+Q+LR + T+ + P++KDE +RFTD S ++ Q P+ +S+D + +
Sbjct: 33 IQQLRHQAGMTVSQSSLPTKKDEEWRFTDISQLQQHHFQVATPVELTLNSIDSFILPETD 92
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++GF N+S LP GV +G+L +S ++++ ++ + Q G + F + N
Sbjct: 93 NSILVFVNGFYSPELSNISGLPQGVKIGNLATLSP---EKIAPYLGQ-QPGQTEFFTAFN 148
Query: 186 GMGAPDLGVIYVPAE--------------------------------------------- 200
+G D+ VI+V AE
Sbjct: 149 TVGLTDVAVIWVDAEITVERPVELLFLTVEPQTPIVIQPRVLVVAEKNSSLQLVEYYNVL 208
Query: 201 --------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
G Y+ NSV E+ + + ++ H+ +Q +S + HI TA+ Q S Y
Sbjct: 209 TENCSGSSGKSSYFTNSVTEIWLQENAQINHTRIQQESGKSFHIGKTAIAQARDSRYTCN 268
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
E+S G + RHN+ + Q G T+T L+ + Q D HS + L++P G QLHKCI
Sbjct: 269 EISIGSQFYRHNLEIFQQGEQTQTNLNGLIISADHQVADTHSAIYLNYPYGTTDQLHKCI 328
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ S A+F+G V V + AQ T+A QL R+LL+ P+A VN KP LQI AD+VKCSHGA
Sbjct: 329 IDDS-AHAIFNGKVFVPKPAQLTNAAQLNRNLLISPKARVNTKPELQITADNVKCSHGAT 387
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+S LE +LFY ++RG+ E AR L+ +F E+IER P S+R ++
Sbjct: 388 VSQLEADELFYLRSRGLTEENARYLLIDAFATEIIERIPLNSLRQRI 434
>gi|428225672|ref|YP_007109769.1| iron-regulated ABC transporter permease SufD [Geitlerinema sp. PCC
7407]
gi|427985573|gb|AFY66717.1| Iron-regulated ABC transporter permease protein SufD [Geitlerinema
sp. PCC 7407]
Length = 445
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 207/400 (51%), Gaps = 51/400 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV-----STDAQ 127
LQ LRD + L +PSR+DE +RFTD S + + Q T + + ++A+
Sbjct: 42 LQGLRDQGAAFLKEQSFPSRRDEDWRFTDLSPLLAVPFQAATASRLTPEAIAPFAVSEAE 101
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSING 186
LVL++G ++ LP G +VGSL + + D++++ G+ F ++N
Sbjct: 102 QSRLVLVNGVYAPELSAIAGLPAGAFVGSLADLPAERQSALQDYLAKQHGGEERFTALNT 161
Query: 187 MGAPDLGVIYVP------------------------------AE--------------GN 202
D+ V+++P AE G+
Sbjct: 162 SHFQDVAVVWLPHNAVIEAPIHLLLVATASEAALISPRCLVVAETGSALTLVEDFVTVGD 221
Query: 203 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
+W N+V EV + +V H+ +Q +++ A HI TAV Q S Y +S GG++SR
Sbjct: 222 GPHWTNAVTEVWVQANAQVNHTRIQREAIAAFHIGKTAVSQGRDSRYTCNAISLGGQISR 281
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 322
H++ V Q G T L+ + Q D HS + P G QLHKCIV +AVF
Sbjct: 282 HHLEVLQQGEQTHLALNGLTVASGTQLADTHSLIQYTQPYGASDQLHKCIVGDR-ARAVF 340
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G + V + AQ T+A QL+R+LLL P+A V+ KP L+I+AD+VKCSHGA +S L+ ++F
Sbjct: 341 NGRISVPKAAQLTNAAQLSRNLLLSPKARVDTKPQLEIVADNVKCSHGATVSQLDTDEVF 400
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSH 422
Y Q+RGID +A++ L+++F AE++ER P PSIR + +
Sbjct: 401 YLQSRGIDQGSAQELLIYAFAAEILERVPVPSIRQALAAQ 440
>gi|428772613|ref|YP_007164401.1| iron-regulated ABC transporter permease SufD [Cyanobacterium
stanieri PCC 7202]
gi|428686892|gb|AFZ46752.1| Iron-regulated ABC transporter permease protein SufD
[Cyanobacterium stanieri PCC 7202]
Length = 457
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 213/410 (51%), Gaps = 60/410 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVSTDAQFP 129
+++L+ + ++ ++ + P+ +DE +RFTD + ++ + T+ + S LD + P
Sbjct: 43 IEQLKQTFAKVVVKSNIPTNRDEAWRFTDLTALQKTDFHAPTKQNLSDSILDGFKLQEAP 102
Query: 130 S--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSING 186
+ LV ++GF + ++S LPDGVYVG+L G+ ++VS+F+ + ++F ++N
Sbjct: 103 NSRLVFVNGFYDENLSDVSALPDGVYVGNLAGLDGSKKEKVSNFLGQNHSDNEVFSALNT 162
Query: 187 MGAPDLGVIYVP------------------------------------------------ 198
G D V++V
Sbjct: 163 AGINDAFVVWVDKNVEVDIPIHLLHIVAKEDLPILVQPRILMVGEVNSRCQIIEYYGATS 222
Query: 199 -----AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
A G Y+ N V E+ + + + H +Q +S + HI +A+ Q S Y + E
Sbjct: 223 VGCSDAVGGKPYFTNVVTEIHLQENASLNHCRIQRESGDGFHIAQSAIAQYRNSSYTINE 282
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
+S GGKL RHN+ + Q G T T L ++ Q D HS + L+HP G QLHK I+
Sbjct: 283 ISLGGKLYRHNLDIIQKGEQTYTNLHGLTMVQGKQIADTHSHVSLNHPYGTVNQLHKYIL 342
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
S G +F+G V V + AQ+T+A QL R+LLL P+A +N KP LQI AD+VKC+HGA +
Sbjct: 343 DDS-GHGIFNGRVDVPKLAQETNAAQLNRNLLLSPKARINTKPELQITADNVKCAHGATV 401
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
S LE ++FY ++RG++ + AR L+ +F E+I++ PY S++ ++ V
Sbjct: 402 SQLEADEIFYLRSRGLNEDDARHLLLDAFAGEIIDKIPYQSLKQRLTQCV 451
>gi|411119135|ref|ZP_11391515.1| Iron-regulated ABC transporter permease protein SufD
[Oscillatoriales cyanobacterium JSC-12]
gi|410710998|gb|EKQ68505.1| Iron-regulated ABC transporter permease protein SufD
[Oscillatoriales cyanobacterium JSC-12]
Length = 450
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 134/407 (32%), Positives = 203/407 (49%), Gaps = 56/407 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
LQ++RD ++ + PS ++E +RFTD S + +++ + R SS++ + A F
Sbjct: 42 LQEVRDRAASRVQELAIPSTREEEWRFTDLSPLLKVELKSVARKSSAISQAEIASFILPE 101
Query: 129 --PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFIS-EFQCGDLFW 182
LV +DG NLP + VG+L + + R+ D+++ + G+ F
Sbjct: 102 SSTCLVFVDGTFLPELSTTQNLPTNMVVGNLATAIQQESSLQNRILDYLARQPGSGETFT 161
Query: 183 SINGMGAPDLGVIYVP-------------------------------AEGND-------- 203
++N D+ VIYVP AE N
Sbjct: 162 ALNTASMTDVAVIYVPQKQIVDSPIHVLFVSTADQPQVMTTPRCLVIAESNSSLTLIEDY 221
Query: 204 ------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
Y+ NSV EV + V H+ +Q S A HI TAV Q + Y +S G
Sbjct: 222 ISLNASVYFTNSVTEVWVEANAHVNHTRIQRDSQTAFHIGKTAVSQARDAHYTCNAISLG 281
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 317
LSRH++ V Q G T T L+ ++ +Q D HS + P G Q+HKCIV
Sbjct: 282 AALSRHHLEVYQTGEQTYTMLNGLTMIADNQVADTHSLISYTKPYGTSNQIHKCIVDDQ- 340
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
AVF+G + V + AQ TDA QL++SLL+ P+A V+ KP L+I AD+VKC+HGA +S LE
Sbjct: 341 AHAVFNGKIFVPKAAQLTDARQLSKSLLMSPKARVDTKPQLEITADNVKCAHGATVSQLE 400
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
++FY Q+RGID +AR LV++F ++I + P S+RN + + V+
Sbjct: 401 SDEVFYLQSRGIDENSARSLLVYAFAYDIISQIPVASLRNILAASVR 447
>gi|298490172|ref|YP_003720349.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
gi|298232090|gb|ADI63226.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
Length = 448
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 216/413 (52%), Gaps = 63/413 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVSTDA 126
LQ+LRDS+ + + + P+ ++E +RFTD S++K + + + ++LDV +
Sbjct: 37 LQQLRDSAVKWVRHSVIPNTRNEEWRFTDLSLLKEVEFNSVDIKTLEKFQETALDVEIFS 96
Query: 127 QFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSI 184
+ LV ++G + ++NLP G+ +G+L + D + + +++++ + D+F ++
Sbjct: 97 EVSHCLVFVNGIFAPNLSAITNLPPGLKIGNLDILPDAVAQ---EYLAQSEGTRDVFTTL 153
Query: 185 NGMGAPDLGV------------IY-------------------VPAEGN----------- 202
N G D+ V IY V AE N
Sbjct: 154 NTAGLNDVAVVWVGKNVVVQNPIYLLFISVAGESAIISQPRCLVVAESNSQVSLIEEYTN 213
Query: 203 ---------DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
+ Y+ANSV E+ + + +V H+ + Q A HI TAV Q S Y
Sbjct: 214 RRGAEKAEDEVYFANSVTEIWVNENAQVSHTRVVMQGEAAFHIGKTAVTQAQYSRYSCNA 273
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
V+ GGK+SRHN+ + Q G TET L+ ++ Q D HS L L+HP G + LHKCI+
Sbjct: 274 VTVGGKISRHNLEILQTGEQTETTLNGLTVIAEKQLADTHSVLFLNHPHGVSKHLHKCII 333
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
VF+G + V ++AQ TDA QL R+LLL +A V+ KP L+I AD+VKCSHGA +
Sbjct: 334 GDR-AHGVFNGKIFVPKHAQLTDAYQLNRNLLLSSKARVDTKPQLEITADNVKCSHGATV 392
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNL 426
S LE+ ++FY Q+RGID ARK LV +F +E+I P +R +++ V +L
Sbjct: 393 SQLEDDEIFYLQSRGIDRNNARKLLVNAFASEIINFIPVSPLREKLLKTVVSL 445
>gi|172035921|ref|YP_001802422.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
gi|354556032|ref|ZP_08975330.1| FeS assembly protein SufD [Cyanothece sp. ATCC 51472]
gi|171697375|gb|ACB50356.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
gi|353552031|gb|EHC21429.1| FeS assembly protein SufD [Cyanothece sp. ATCC 51472]
Length = 449
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 211/411 (51%), Gaps = 62/411 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
+Q LR ++ + PS+KDE +RFTD S + ++++ + +T+ + +AQ
Sbjct: 34 MQTLRKNAVSQVQELTLPSKKDEEWRFTDLSELYQLEFQTAKTETVTQSIIDNFILPEAQ 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G + N+S LP+ +YVG+L + D +++D++ + Q G D F ++N
Sbjct: 94 QSYLVFVNGEYSSELSNVSELPEDIYVGNLSDLPDPKNNKIADYLGK-QEGEKDAFTALN 152
Query: 186 GMGAPDLG--------VIYVPA-------------------------------------- 199
G D+ V+ P
Sbjct: 153 TAGFKDVAVIWVNKNIVVETPIQLLFLTVGNETPSLIQPRTLVIAETGSSLSFVEYYATV 212
Query: 200 -------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
E N Y+ NSV E+ + ++ HS +Q + ++ HI +A+ Q S Y
Sbjct: 213 TESCSDDEKNQPYFTNSVTEIWLDNNAQINHSRIQRELGDSFHIGKSAISQNQDSHYTCN 272
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
EV+ G KLSRH + + Q G TET L+ ++ +Q D H+ + L+HP G QLHKCI
Sbjct: 273 EVNLGAKLSRHTLQMWQQGTQTETHLNGLTMIDHEQLADTHTAVCLNHPYGITHQLHKCI 332
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ + G+ VF+G + V + AQ T+A QL R+LLL P+A +N KP LQI AD+VKCSHGA
Sbjct: 333 IDGN-GRGVFNGKIFVPKPAQLTNATQLNRNLLLSPKARINTKPELQITADNVKCSHGAT 391
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
IS LE +LFY Q+RG++ AR L+ +F E++ER P S++ ++ V
Sbjct: 392 ISQLEADELFYLQSRGLNETDARHLLIDAFATEILERIPLESLQQRLTQCV 442
>gi|218245299|ref|YP_002370670.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|257058334|ref|YP_003136222.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
gi|218165777|gb|ACK64514.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|256588500|gb|ACU99386.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
Length = 455
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 199/394 (50%), Gaps = 65/394 (16%)
Query: 88 PWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--------DAQFPSLVLIDGFIQ 139
P+P+ E +RFTD S + + P RP S+ +S +A+ SL+ ++G
Sbjct: 56 PFPTTHHEEWRFTDLSELYQIRFDP--RPRSTTILSDTLAPFILPEAKLSSLIFVNGEFA 113
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVP 198
NL+ LPDGVYVG+L+G+S ++V +++++ D+F +N + +++V
Sbjct: 114 PELSNLAALPDGVYVGNLMGLSSEKREKVVNYLAKHDGAKDVFTLMNTADMYHIAIVWVD 173
Query: 199 ---------------------------------------------AEGNDC--------Y 205
A DC Y
Sbjct: 174 PNVTVDIPIFLLFLTVASHIHNIIQPRVLVIAETGSSLQLVEHYGAISEDCSDLAHNKAY 233
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N+V E+ + +V H+ +Q + ++ HI TA+ Q S Y E++ G KLSRH +
Sbjct: 234 FTNTVTEIWVKDNAQVNHTRVQRELGDSFHIGKTAIAQSQDSRYTCTEINLGAKLSRHTL 293
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
V Q G TET L+ ++ Q D HS + L+H G QLHKCI+ + VF+G
Sbjct: 294 EVFQHGKQTETYLNGLTMVGGKQVADTHSAVFLNHSYGMAHQLHKCIIDDE-ARGVFNGK 352
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V + AQ T+A QL R+LLL P+A +N KP LQI AD+VKCSHGA IS LE +LFY Q
Sbjct: 353 IFVPKAAQLTNATQLNRNLLLSPKARINTKPELQITADNVKCSHGATISQLESDELFYLQ 412
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+RG+ AR L+ +F AE++++ P S+R ++
Sbjct: 413 SRGLTESDARNLLIDAFAAEILDKIPLASLRTRL 446
>gi|300863813|ref|ZP_07108738.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
gi|300338161|emb|CBN53884.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
Length = 446
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 208/403 (51%), Gaps = 60/403 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-------MIKSSQIQPITRPSSSLDVSTD 125
L+ LRD +++ +L+ +P+ KDE +RFT+ S + ++ I +L VS+
Sbjct: 34 LKDLRDIATEYVLAAAFPTTKDEEWRFTNLSPLLEIPFQVAENKQLDIGLSDITLPVSSK 93
Query: 126 AQFP-SLVLIDGFI--QNSALNLSNLPD---GVYVGSLLGVSDGIMKRVSDFISEFQC-G 178
P LV ++G+ Q S++ S LP Y G+L R+ + +S+ Q
Sbjct: 94 EDLPLRLVFVNGYYAPQLSSVQSSLLPTLALEFYAGNLSNAPGPYHARIREHLSKHQQQS 153
Query: 179 DLFWSINGMGAPDLGVIYVPAE-------------------------------------- 200
++F ++N G D V++VP +
Sbjct: 154 EVFSALNIAGLVDAAVVFVPQDKAIDTPIHLLFFTIAGATPVMCQPHCLVIAEPGSSITL 213
Query: 201 -------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
GN + N++ E+V+G+ V H +Q + +A HI + + Q S Y
Sbjct: 214 VEDYATIGNVSTFTNAMTEIVVGENATVNHLRIQREGGDAFHIGKSTISQSRHSRYTCHA 273
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
+S G K+SRHN+ V Q G TET L+ L+ +Q D HS + ++P G RQLHKCIV
Sbjct: 274 ISLGAKISRHNLEVTQAGEGTETTLNGLTLIGGEQLADTHSVIGFNYPHGMSRQLHKCIV 333
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
AVF+G V V + AQ TDAGQL R+LLL P+A V+ KP L+I+AD+VKCSHGA +
Sbjct: 334 DDK-AHAVFNGKVFVPKLAQLTDAGQLNRNLLLSPKARVDTKPQLEIVADNVKCSHGATV 392
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
S LE+ ++FY Q+RG+D T+R L+ +F AE++ + P ++R
Sbjct: 393 SQLEDDEMFYLQSRGLDETTSRHLLIDAFAAEILNQLPVAAVR 435
>gi|119509160|ref|ZP_01628311.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
gi|119466326|gb|EAW47212.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
Length = 457
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 213/416 (51%), Gaps = 61/416 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST----DAQF 128
Q+LR ++ + + P+ ++E +RFTD S ++ Q T+ S +D+S +A
Sbjct: 45 FQELRQGAANWVRHSSIPTTREEEWRFTDLSALRQVQFHVETQLKS-VDISALTLPEAVN 103
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGM 187
LV ++G +++LP GV VG+L G S + V ++++ + ++F ++N
Sbjct: 104 SRLVFVNGVYAPDLSAVADLPSGVVVGNLAGFSKSQQEIVKHYLAQAEGSQEVFTALNTA 163
Query: 188 GAPDLGVIYVP------------------------------------------------- 198
G D V++V
Sbjct: 164 GISDAAVVWVAQNVIVETPIHLLFVAVVGEQATISQPRCLVMAETGGSVTVVEDFINHRG 223
Query: 199 ---AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
AEG Y N+V EV +G+ +V H+ ++ + A H+ TAV Q S Y +S
Sbjct: 224 AEDAEG--VYLTNAVTEVWLGENAQVSHTRIEREGAEAFHVGKTAVTQARDSRYTCHALS 281
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
GGKLSRHN+ + Q G TET L+ ++ Q D HS + L++P QLHKCIV
Sbjct: 282 FGGKLSRHNLEILQTGEQTETTLNGLTMISDRQVGDTHSAIALNYPHSTSTQLHKCIVGD 341
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
AVF+G V V + AQ T+AGQL R+LLL +A V+ KP L+I AD+VKC+HGA +S
Sbjct: 342 R-AHAVFNGKVFVPKAAQLTNAGQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQ 400
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
LE+ ++FY Q+RGI+ + ARK L+ +F AE+I + P S++ +++ V +L T+
Sbjct: 401 LEDDEIFYLQSRGINEDDARKLLINAFAAEIINQIPVKSLQAVLLNTVNSLKSLTN 456
>gi|440681297|ref|YP_007156092.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
cylindrica PCC 7122]
gi|428678416|gb|AFZ57182.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
cylindrica PCC 7122]
Length = 447
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 211/410 (51%), Gaps = 63/410 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ LRD ++ + + P+ ++E +RFTD S +K + SL+ D P
Sbjct: 42 LQGLRDVAANWVRHSVIPNTREEEWRFTDLSPLKQVKFNLGMFEEISLE---DYILPEVS 98
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV ++G + N NLP G+ VG+L +S ++++ ++++ + ++F ++N
Sbjct: 99 QRLVFVNGVYSPNLSNTENLPSGLMVGNLDVLSGEVLRK---YLAQAEGANEVFTALNTA 155
Query: 188 GAPD---------------LGVIYVPAEGN------------------------------ 202
G D + +++V G
Sbjct: 156 GLCDAAVVWVGKNVVVESPIHLLFVSVSGESATISQPRVLVVAECGSQVGLIEEYTNRPD 215
Query: 203 ------DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 256
+ Y+ N V E+ + + +V HS + + A H+ TAV Q +S Y V+
Sbjct: 216 AENAEEEVYFTNGVTEIWVHENAQVSHSRVVWEGDAAFHVGKTAVTQARSSRYTCNAVTV 275
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 316
GGK+SRHN+ + Q G TET L+ ++ +Q D HS + L+HP G +QLHKCI+
Sbjct: 276 GGKISRHNLEILQTGEQTETTLNGLTVVADNQLGDTHSAIALNHPHGISKQLHKCIIGDR 335
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
VF+G V V + AQ TDA QL R+LLL P+A V+ KP L+I AD+VKC+HGA +S L
Sbjct: 336 -AHGVFNGKVFVPKPAQLTDAAQLNRNLLLSPKARVDTKPQLEITADNVKCAHGATVSQL 394
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNL 426
E+ Q+FY Q+RGID ARK LV +F AE+I P PS+R++++ V +L
Sbjct: 395 EDDQIFYLQSRGIDEVNARKLLVNAFAAEIINFIPVPSLRDKLLKTVTSL 444
>gi|307103250|gb|EFN51512.1| hypothetical protein CHLNCDRAFT_59225 [Chlorella variabilis]
Length = 495
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 146/223 (65%), Gaps = 8/223 (3%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y+ ++V E + ++HSY+Q +S AH+K T V Q S Y L E GG LSRH+
Sbjct: 274 YFTDAVAEFELDDSAVLKHSYVQLESTGVAHMKATLVNQGRKSSYSLTEARVGGTLSRHD 333
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
++++QLG T +E+ SF L Q DLHS+L LDHP G QLHKCIV+ G+ VFDG
Sbjct: 334 LNIEQLGEGTHSEMRSFLLCGDGQLHDLHSKLTLDHPNGEANQLHKCIVSSPTGRGVFDG 393
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
NV+VNR AQ+TDA QL+R+LLL PRAT IIADDVKC+HG +SDLEE +LFY
Sbjct: 394 NVRVNRLAQKTDAQQLSRNLLLVPRAT--------IIADDVKCTHGCTVSDLEEEELFYL 445
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
+ARG+ AR+ LV+SFG EV++ +++ +V + V+ +
Sbjct: 446 RARGVTANVARQMLVYSFGLEVVQGLRDDALQARVEAAVQRTL 488
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+ +LE +P S++ LP+PL L+ S L + P+ ++E +RFTD + +
Sbjct: 55 IERTLEVIVPESAA-LPKPLA--SLQASCLSALATLRMPTTRNEEYRFTDLRSLLQHSLG 111
Query: 112 PITRPSSSLDVSTDAQFP-----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
P + V ++V+ DG I ++ +LP GVYVG L+G I+
Sbjct: 112 PTAGAAPDAAVRAACSLKQVAAATVVVADGVIDQQQSSIRDLPAGVYVGGLVGAPQDIVS 171
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA 199
S + G F ++NG A D+ V++VPA
Sbjct: 172 LALGAQSRSR-GGPFATLNGAAAQDVVVVHVPA 203
>gi|427740191|ref|YP_007059735.1| iron-regulated ABC transporter permease SufD [Rivularia sp. PCC
7116]
gi|427375232|gb|AFY59188.1| Iron-regulated ABC transporter permease protein SufD [Rivularia sp.
PCC 7116]
Length = 450
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 221/450 (49%), Gaps = 64/450 (14%)
Query: 28 PNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLST 87
P+K+ + + D ++ +L + + S P S L Q+L+DS++ + +
Sbjct: 7 PDKVSTATEANLLNGLSGDVYLNKLLDKV--STPKSKGWL------QELKDSAASRVRHS 58
Query: 88 PWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS--TDAQFPSLVLIDGFIQNSALNL 145
P++KDE +RFTD S + R S D + T LV ++G ++ +
Sbjct: 59 FLPTKKDEEWRFTDLSALFKIDFNVENRNFLSPDTTPFTAISENRLVFVNGIFKSELSAI 118
Query: 146 SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYV------ 197
+NLPDGV V +L + D + V +++ + Q GD +F ++N G DL +I++
Sbjct: 119 ANLPDGVVVSNLASLPDLDGEFVKEYLGQAQ-GDKEVFTALNTAGINDLALIWLSRNVVV 177
Query: 198 --------------------------------------------PAEGNDCYWANSVLEV 213
+ + Y N+V E+
Sbjct: 178 ETPIHLVFITAGDKTISQPRCLVVAKTGSEVTLVEEFIHFGDVEKKQEKEVYLNNAVTEI 237
Query: 214 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 273
+ + V HS ++ L A HI TAV Q S Y ++ GGKLSRHN+ + Q G
Sbjct: 238 WVDENAGVNHSRVERDGLEAFHIGKTAVTQARNSRYTCNVINLGGKLSRHNLEIFQTGEQ 297
Query: 274 TETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQ 333
T+T L+ ++ +Q D HS L L++P +QL K I+A VF+G + V + AQ
Sbjct: 298 TQTTLNGLTIISGNQVSDTHSALALNYPYSCSKQLQKNIIADK-AHGVFNGKIFVPKPAQ 356
Query: 334 QTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLET 393
TDA QL R+LLL P+A V+ KP L+I AD+VKC+HGA +S LE+ ++FY Q+RGI+ +
Sbjct: 357 LTDASQLNRNLLLSPQAKVDTKPQLEITADNVKCAHGATVSQLEDDEIFYLQSRGINENS 416
Query: 394 ARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
AR L+ +F AE+I P PS+R + V
Sbjct: 417 ARHLLINAFAAEIINHIPVPSLRKNLTKTV 446
>gi|428301500|ref|YP_007139806.1| iron-regulated ABC transporter permease SufD [Calothrix sp. PCC
6303]
gi|428238044|gb|AFZ03834.1| Iron-regulated ABC transporter permease protein SufD [Calothrix sp.
PCC 6303]
Length = 451
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 205/399 (51%), Gaps = 48/399 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS--TDAQFPS 130
L ++++ ++ + + P+ +DE +RFTD S +K + +S +++ + +
Sbjct: 52 LPEVKEKAANWVRHSTLPTTRDEEWRFTDLSALKQVNFNVASGSITSSNIAFLQECENSR 111
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGA 189
LV ++G +S LP+G+ V +L + ++ + ++ + ++F ++N G
Sbjct: 112 LVFVNGVYAAELSAVSGLPEGITVTNLSQLPAEYTEKAKIYFAQAEGAIEVFTALNTAGM 171
Query: 190 PDLGVIYVP--------------------------------------------AEGNDCY 205
D VI++ E D +
Sbjct: 172 LDAAVIWIGKNVAVETPIHLIYVTTGENPVISQPRCLVVAETGSQVTLVEEFVTENQDGH 231
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N+V E+ +G+ V HS +Q +L HI TAV Q S Y ++ GGK+SRHN+
Sbjct: 232 FVNAVTEIWVGENASVNHSRIQKDNLATFHIGKTAVTQAKYSRYTCNAIAFGGKVSRHNL 291
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ Q G TET L+ ++ +Q D+HS + L+HP G QL K IVA A+F+G
Sbjct: 292 EILQTGEQTETTLNGLVMVKGEQVADMHSAIALNHPHGISNQLQKNIVADK-AHAIFNGK 350
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V + AQ+T+A QL R+LLL P+A V+ KP L+I AD+VKC+HGA +S LE+ ++FY Q
Sbjct: 351 VFVPKLAQETNASQLNRNLLLSPKARVDTKPQLEITADNVKCAHGATVSQLEDDEIFYLQ 410
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
+RGID +RK L+ +F E+I P S+R+ + + VK
Sbjct: 411 SRGIDEHASRKLLINAFATEIINHIPVASLRDNLFAIVK 449
>gi|428304611|ref|YP_007141436.1| iron-regulated ABC transporter permease SufD [Crinalium epipsammum
PCC 9333]
gi|428246146|gb|AFZ11926.1| Iron-regulated ABC transporter permease protein SufD [Crinalium
epipsammum PCC 9333]
Length = 437
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 213/422 (50%), Gaps = 68/422 (16%)
Query: 67 LPQPLP-----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD 121
L Q LP ++++RD ++ + P+ +DE +R TD S + Q ++ S++
Sbjct: 20 LGQELPATTSLIREIRDRATAVVQELAIPTTRDEEWRVTDLSGLLKVNFQAVSNQESAIS 79
Query: 122 VST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
+S +A LV ++G +++NLP G++VG+LL + + + +++ +
Sbjct: 80 LSDINSLILPEAAASRLVFVNGIYAPELSSVANLPAGLFVGNLLAAN---IPHLENYLGK 136
Query: 175 FQCG-DLFWSINGMGAPDLGV---------------IYVPAEGND-------CY------ 205
Q G ++F ++N D V +++ G C
Sbjct: 137 QQGGQEVFTALNTASLTDAAVVYVPKNLLVETPIHLLFISVTGEAATISQPRCLVVVEAG 196
Query: 206 -----------------------WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 242
NSV EV +G+ +V H +Q ++ A HI +A+
Sbjct: 197 STVTLIEDYISYPVTSPQSPVTNLTNSVTEVWVGENAQVSHIRVQQENKEAFHIGKSAIA 256
Query: 243 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 302
Q S Y VS GG+LSRHN+ V Q G TET L+ ++ Q D HS + L+HP
Sbjct: 257 QARNSRYACHAVSFGGQLSRHNLEVFQTGEATETTLNGLTMIGGSQIGDTHSAIALNHPY 316
Query: 303 GYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA 362
G QLHKC+V AVF+G V V + AQ T+AGQL R+LLL +A V+ KP L+I A
Sbjct: 317 GITNQLHKCVVGDR-AHAVFNGKVFVPKPAQLTNAGQLNRNLLLSSKARVDTKPQLEITA 375
Query: 363 DDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSH 422
D+VKCSHGA +S LE+ ++FY Q+RGID ++AR L+ +F E+IE+ P S+R ++
Sbjct: 376 DNVKCSHGATVSQLEDDEIFYLQSRGIDADSARTLLINAFAIEIIEQIPVASVRERLTQI 435
Query: 423 VK 424
V+
Sbjct: 436 VR 437
>gi|332709645|ref|ZP_08429604.1| Iron-regulated ABC transporter permease protein SufD [Moorea
producens 3L]
gi|332351472|gb|EGJ31053.1| Iron-regulated ABC transporter permease protein SufD [Moorea
producens 3L]
Length = 449
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 205/403 (50%), Gaps = 57/403 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-MIKSSQIQPITRPSSSLDVST----DAQ 127
LQ+L + + P+ KDE +RFTD S +++ + + +S+LD+S +A
Sbjct: 32 LQELSNHARGIAQELAIPTTKDEEWRFTDLSPLLQETFEAALAVDTSTLDISPVVLPEAM 91
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSING 186
LV ++G +++ LP+GV+VG+L + R++D++ Q D+F +N
Sbjct: 92 NSRLVFVNGIYAPEQSSVAGLPEGVFVGNLAELPSEYQSRIADYLGNQQGVSDVFTLLNT 151
Query: 187 MGAPDLGVIYVP----------------AEG----------------------------- 201
G D+ VI++P A+G
Sbjct: 152 AGLTDVAVIWLPRNTEVTAPIHLLFVSMADGVPRLFQPRCLVVAEPGSQLSLVEEYWQGQ 211
Query: 202 -----NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 256
Y NSV E+ +G+ +V H + +S A H+ +A+ Q S Y V+
Sbjct: 212 EANSAQGVYLTNSVTELWVGENARVTHIRVDGESNQAFHVGKSAIAQSRNSFYSCHGVAF 271
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 316
GGKLSRH + V Q+G TET L+ + Q D HS ++L+HP G QL KCI+ S
Sbjct: 272 GGKLSRHTLEVFQMGEGTETILNGLTAISEQQLADTHSAVMLNHPNGISNQLQKCIIDGS 331
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
AVF+G V V + AQ T+A QL R+LLL P+A V+ KP L+I AD+VKCSHGA +S L
Sbjct: 332 -AHAVFNGKVSVPQAAQLTNAAQLNRNLLLSPKARVDTKPQLEITADNVKCSHGATVSQL 390
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
E ++FY Q+RG+ AR L+ +F AE+I + P S+R ++
Sbjct: 391 EADEVFYLQSRGLKETDARNLLIDAFVAEIINQIPLASLRQRL 433
>gi|254413288|ref|ZP_05027059.1| FeS assembly protein SufD [Coleofasciculus chthonoplastes PCC 7420]
gi|196179908|gb|EDX74901.1| FeS assembly protein SufD [Coleofasciculus chthonoplastes PCC 7420]
Length = 452
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/407 (32%), Positives = 205/407 (50%), Gaps = 63/407 (15%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT----RPSSSLDVS--TDAQF 128
+LRD ++ + P+R+DE +RFTD S + + Q + + LD++ T +
Sbjct: 38 QLRDQAAAIVEELAMPTRRDEEWRFTDLSPLLAVNFQGVEAFFEQFLQHLDLTSLTLPET 97
Query: 129 PS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSIN 185
P LV ++G ++ LP+GVYVG+L G+ + +R+ +++ + Q D+F ++N
Sbjct: 98 PDSRLVFVNGVYAPDLSSVRGLPEGVYVGNLAGLPNAYQERIPNYLGKQQAASDVFAALN 157
Query: 186 GMGAPDLGVIYVP----------------------------------------------- 198
G D V+++P
Sbjct: 158 TSGLTDAAVVWIPKATIVETPIHLLFISTTDDVPVICQPRCLVVAEPGSVVNLIEHYAAN 217
Query: 199 AEG------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
EG N Y+ N V E+ I +V H+ Q ++++ HI TAV Q S Y
Sbjct: 218 VEGCPDIPVNRPYFNNQVTEIWIEDDAQVIHTRNQREAIDGFHIGKTAVTQARNSRYTCN 277
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
+S G +LSRHN+ + Q G TET L ++ +Q D HS +LL+HP G QLHKCI
Sbjct: 278 AISLGARLSRHNLEIVQTGEATETTLKGLTMIGGEQVADTHSAVLLNHPHGMTNQLHKCI 337
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ VF+G V V + AQ T+A QL R+LLL +A VN KP L+I AD VKCSHGA
Sbjct: 338 I-DDRAHGVFNGKVFVPQAAQFTNAAQLNRNLLLSAKARVNTKPQLEITADQVKCSHGAT 396
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+S L+ +FY Q+RG++ AR L+ +F AE+++R P S+R ++
Sbjct: 397 VSQLDPEDVFYLQSRGLNETNARNLLIDAFVAEILQRIPVDSLRQRL 443
>gi|428204624|ref|YP_007083213.1| FeS assembly protein SufD [Pleurocapsa sp. PCC 7327]
gi|427982056|gb|AFY79656.1| FeS assembly protein SufD [Pleurocapsa sp. PCC 7327]
Length = 449
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 208/409 (50%), Gaps = 57/409 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---MIKSSQIQPITRPSSSLDVST--DAQ 127
+++LR + +L + PS++DE +RFTD S I + T + L+ T +A+
Sbjct: 42 IEELRRQAVSQVLESRIPSKRDEEWRFTDLSDLLQISFQVAEKATVAAGDLERLTLPEAK 101
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSING 186
+V ++GF ++S LP+ VYVG+L+ + D ++ +++ + ++F ++N
Sbjct: 102 QSRIVFVNGFYSPELSDVSGLPESVYVGNLVDLPDAQNDKIVKYLARQEDATEIFTALNT 161
Query: 187 MGAPDLGVIY-------------------------------VPAE--------------- 200
G D+ VI+ V AE
Sbjct: 162 SGLIDVAVIWANPNVIVETPIQVLFLSVSGSSPSFSQPRLLVVAETGSSLELVEFYGAVG 221
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
N Y+ N+V E+ + +VRH+ +Q +S HI A+ Q S Y E++ GGKL
Sbjct: 222 KNTPYFTNAVTEIWVQDNAQVRHNRIQQESATGFHIAKNAIAQARDSRYTCNEINLGGKL 281
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
R+N+ + Q G T T L+ + +Q D HS + L P G QLHKCI+ S A
Sbjct: 282 YRNNLDIFQTGEQTTTHLNGLVAISGEQVSDTHSAIFLTKPHGTTDQLHKCIIDGS-AHA 340
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+G V V + AQ T+A QL R+LLL P+A VN KP LQI AD+VKCSHGA +S LE +
Sbjct: 341 VFNGKVFVPKAAQLTNAAQLNRNLLLSPKARVNTKPELQITADNVKCSHGATVSQLEADE 400
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQ----VVSHVKN 425
+FY ++RG+ +R+ LV +F AE++ER S+R + + VKN
Sbjct: 401 VFYLRSRGLTEADSRRLLVDAFAAEILERISIESLRQKLTQLIAQKVKN 449
>gi|443476916|ref|ZP_21066797.1| Iron-regulated ABC transporter permease protein SufD [Pseudanabaena
biceps PCC 7429]
gi|443018046|gb|ELS32366.1| Iron-regulated ABC transporter permease protein SufD [Pseudanabaena
biceps PCC 7429]
Length = 467
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 203/401 (50%), Gaps = 58/401 (14%)
Query: 80 SSQTLLSTPWPSRKDEPFRFTDTSMIKS-SQIQPITRPSSSLDVST--------DAQFPS 130
+S L + +P+ KDE +++TD S + S + P TR S + D+ ++
Sbjct: 61 ASDRLFNLSFPTTKDEEWKYTDVSALGSLTFANPETRTSRNSDIEALITKHIAPESLGSR 120
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSINGMGA 189
LV ++G + +LSN+ G+ +G+L + D I+ ++ +++ + D F S+N
Sbjct: 121 LVFVNGRYRQDLSDLSNIVGGLEIGTLETLGDRILPKLRSHLAQHPEANDYFASLNTACM 180
Query: 190 PDLGVIYVP-----------------------------------------------AEGN 202
D+ +I VP E +
Sbjct: 181 EDVAIILVPKNLVVENPIQLIFGSVPEVGQATLINQPRCLVIAESHSNLTFVQTFVGEDH 240
Query: 203 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
Y+ N+V EV + +G +V H+ +Q Q A HI TA+ Q S Y+ +S G K+SR
Sbjct: 241 QVYFTNAVTEVWLAEGAQVNHTKVQQQGNEAIHINTTAIAQARNSVYKNQSISFGAKISR 300
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 322
N+ V Q+ TET L+ + +Q D HS + ++P G +QLHKCI A A+F
Sbjct: 301 QNLIVHQMAEQTETSLTGLAFIDDEQLADTHSCIAHNYPHGSSKQLHKCI-ADGRSHAIF 359
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G ++V + AQQTD+ QL+R+LLL +A V+ KP L+I AD+VKC+HGA +S L+ ++F
Sbjct: 360 NGKIQVAKLAQQTDSAQLSRNLLLSGKARVDTKPQLEIFADNVKCAHGATVSQLDAEEIF 419
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
Y Q+R ID E+A L ++F E I + P S++ + S V
Sbjct: 420 YLQSRAIDAESAANLLTYAFATEAISQIPILSVQRSLSSFV 460
>gi|119493189|ref|ZP_01624064.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
gi|119452754|gb|EAW33931.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
Length = 446
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 211/426 (49%), Gaps = 80/426 (18%)
Query: 59 SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-------------MI 105
+L + + +PQ LQ LRD ++ L P++K+E +RFTD S +
Sbjct: 19 NLAKTQTIVPQNSHLQDLRDRAATELQDKAIPTQKEEDWRFTDLSGLLQVNFQVAKPMQL 78
Query: 106 KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNL--PDGVYVGSLLGVSDG 163
I P+T P +A+ LV +DG A +LS DG++ G+L +
Sbjct: 79 TPEDISPLTLP--------EAENSCLVFVDG---EYAPHLSTFSQTDGIFAGNLGNLPAS 127
Query: 164 IMKRVSDFISEFQCG-DLFWSINGMGAPDLGVIYVP------------------------ 198
R+ D++ + Q ++F ++N D+ +I+V
Sbjct: 128 FGDRIDDYLDKQQGNSEIFTALNTASLTDIAIIWVGKNQAVETPLHLLFISTADDTPRMS 187
Query: 199 --------------------AEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQS 230
A DC Y+ NSV E+ I + +V+H+ +Q +
Sbjct: 188 QPRALVVAETGSSCTFIEHYASLEDCSGFSTHHPYFVNSVTEIWIEENAEVKHTRVQRDA 247
Query: 231 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 290
A HI TA+ Q S Y L +S G KLSRHN+ + Q G TET L+ L+ +Q
Sbjct: 248 PQAFHIGRTAISQARTSRYTLNTISLGAKLSRHNLDLYQAGEGTETTLNGLTLIGEEQLA 307
Query: 291 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRA 350
D HS +H G Q+HKCI+ + VF+G V V++ AQ T+A QL+++LLL P+A
Sbjct: 308 DTHSATFFNHQHGIYNQVHKCIL-DDRARGVFNGRVVVSQAAQLTNANQLSQNLLLSPQA 366
Query: 351 TVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
+N KP L+I+ADDVKCSHGA +S LE+ ++FY ++RG+D +R L+ +F +E++++
Sbjct: 367 RINTKPQLEIVADDVKCSHGATVSQLEDDEIFYLRSRGLDDRMSRHLLIDAFASEILQKL 426
Query: 411 PYPSIR 416
P S+R
Sbjct: 427 PLDSLR 432
>gi|414078259|ref|YP_006997577.1| FeS assembly protein SufD [Anabaena sp. 90]
gi|413971675|gb|AFW95764.1| FeS assembly protein SufD [Anabaena sp. 90]
Length = 438
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 206/404 (50%), Gaps = 55/404 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
L++LRD +++ + + P+ ++E +RFTD S +K + +SL D+ +
Sbjct: 37 LKQLRDGAAKWVRHSVIPNTREEEWRFTDLSSLKQVDFKLGMFQKTSLGSDILPEVS-QR 95
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGA 189
LV ++G N NLP G+ VG+L +S I V +++++ + ++F ++N
Sbjct: 96 LVFVNGVYSPDLSNTENLPAGLIVGNLNVLSSEI---VGEYLAQAEGAKEVFTALNTAAL 152
Query: 190 PDLGVIYVP-------------------------------AEGND--------------- 203
D+ V++V AE N
Sbjct: 153 NDVAVVWVGKNVVLETPIHLLFISVSGESATISQPRVLVVAESNSQVTLIEEYIASSQNE 212
Query: 204 -CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
Y+ NSV E+ + + +V H+ + + A H+ TAV Q S Y V+ GGK+SR
Sbjct: 213 GVYFTNSVTEIWVNENAQVSHNRIAREGAAAFHVGKTAVTQARYSRYSCNAVTVGGKISR 272
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 322
HN+ + Q G TET L+ ++ +Q D HS L L+HP G +QLHKCI+ VF
Sbjct: 273 HNLEILQTGEQTETTLNGLTVIADNQVADTHSALSLNHPHGVSKQLHKCIIGDR-AHGVF 331
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G + V + AQ T+A QL R+LLL ++ ++ KP L+I AD+VKC+HGA +S LE+ Q+F
Sbjct: 332 NGKIFVPKLAQLTNASQLNRNLLLSSKSRIDTKPQLEITADNVKCAHGATVSQLEDDQIF 391
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNL 426
Y ++RGID ARK LV F EVI P S+R ++ V +L
Sbjct: 392 YLESRGIDENNARKLLVNGFAMEVINFIPVASLRESLLKTVTSL 435
>gi|434384446|ref|YP_007095057.1| FeS assembly protein SufD [Chamaesiphon minutus PCC 6605]
gi|428015436|gb|AFY91530.1| FeS assembly protein SufD [Chamaesiphon minutus PCC 6605]
Length = 433
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 206/407 (50%), Gaps = 60/407 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD-------VSTD 125
L +LR ++ L PS KDE +RFT+ + + Q T P++ + V +
Sbjct: 27 LLELRTQAAGYLQEETLPSNKDEEWRFTNLDPLLT---QTFTAPATQVPLVNINGLVLPE 83
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSI 184
A LV ++G +L++LP GV+VG+L ++ +S ++ + G+ +F +I
Sbjct: 84 AINTRLVFVNGIYAPLLSSLADLPAGVFVGNL-AAANATGLAISTYLGKQPGGEEVFTAI 142
Query: 185 NGMGAPDLGVIYVPAE-------------------------------------------- 200
N G + V+++ +
Sbjct: 143 NTAGINEAAVLWLAPDIVLETPIHLLFITTVDDTAIATQPRTLIVLEQRSSATLIQEYLH 202
Query: 201 ---GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
+ Y+ N+V EV +G K+ H+ +Q++ + A HI TAV Q S Y + G
Sbjct: 203 TSIPDRSYFNNAVTEVWLGDTAKLNHTRIQDEDITAIHIGKTAVSQSQHSAYTGTSIELG 262
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 317
KLSRHN + Q+G TET L+ ++ +Q D HS + L P G QLHKCIV
Sbjct: 263 SKLSRHNWEICQIGAQTETYLNGLTMVNGEQESDTHSTIALTKPHGITAQLHKCIV-DDR 321
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
A+F+G V V + AQQT+AGQL R+LLL A ++ KP L+I AD+VKCSHGA +S LE
Sbjct: 322 AHAIFNGKVFVPQAAQQTNAGQLNRNLLLSSTARIDTKPQLEITADNVKCSHGATVSQLE 381
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
+ ++FY Q+RG+ +ETA+ L+ +F E+I+R P S+R ++ VK
Sbjct: 382 DDEIFYLQSRGLAVETAKILLINAFAVEIIDRIPVASVREKLAVAVK 428
>gi|126660041|ref|ZP_01731162.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
gi|126618638|gb|EAZ89386.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
Length = 449
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/411 (32%), Positives = 214/411 (52%), Gaps = 62/411 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
+Q LR ++ + PS+KDE +RFTD S + ++++ + +T+ + +AQ
Sbjct: 34 VQTLRKNAVSQVQELTLPSKKDEEWRFTDLSELYQLNFQTAKTETVTQTIIDNFILPEAQ 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G + N+S L + +Y+G+L + D ++++++ + Q G D F ++N
Sbjct: 94 QSYLVFVNGEYSSELSNVSGLSEDIYIGNLGHLPDAKNSKIANYLGK-QEGEKDAFTALN 152
Query: 186 GMGAPDLGV--------IYVPAE------GND---------------------------- 203
G D V I P + GND
Sbjct: 153 TAGFKDAAVIWANKNSVIETPIQLLFLTVGNDTPILIQPRTLVIAETGSSLSFVEYYATV 212
Query: 204 ---C--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
C Y+ NSV E+ + ++ HS +Q + ++ HI +A+ Q S Y
Sbjct: 213 TESCSDDEKNQPYFTNSVTEIWLENNAQINHSRIQRELGDSFHIGKSAISQNQDSHYTCN 272
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
EV+ G K+SRH + + Q G TE+ L+ ++ ++Q D H+ + L+HP G QLHKCI
Sbjct: 273 EVNLGAKVSRHTLQIWQKGTQTESHLNGLTMIDNEQLADTHTAVCLNHPHGVTHQLHKCI 332
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ + G+ VF+G + V + AQ T+A QL R+LLL P+A +N KP LQI AD+VKCSHGA
Sbjct: 333 IDGN-GRGVFNGKIFVPKPAQLTNATQLNRNLLLSPKARINTKPELQITADNVKCSHGAT 391
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
IS LE +LFY Q+RG++ AR L+ +F AE++ER P S++ ++ V
Sbjct: 392 ISQLEADELFYLQSRGLNEIDARHLLIDAFAAEILERIPLNSLQTRLTQCV 442
>gi|376001922|ref|ZP_09779776.1| FeS assembly protein SufD [Arthrospira sp. PCC 8005]
gi|375329833|emb|CCE15529.1| FeS assembly protein SufD [Arthrospira sp. PCC 8005]
Length = 458
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 199/404 (49%), Gaps = 61/404 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ +RD+++ + P+R+ E +RFTD S + QP T S D + P
Sbjct: 40 LQNIRDNAASWVKELAIPTRRHEDWRFTDLSALLELPFQPATAVELSRDEISPLILPEVK 99
Query: 131 ---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++GF L NLPDGV+VG+L + + ++ +++++ ++F ++N
Sbjct: 100 GTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNT 159
Query: 187 MGAPDLGVI----------------------------------------------YVPAE 200
D V+ Y A
Sbjct: 160 SSLADAAVVWVHQNQVIDTPIHLLFISLSSSQPVTSQPRTLIVAEPGSKATVIEHYATAN 219
Query: 201 GNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
C Y+ N+V E+ +G +++H+ LQ + ++ HI T V Q S Y
Sbjct: 220 ILGCSDRTQKTPYFTNTVTELWVGDNAELQHTRLQRELASSFHIGRTVVSQGRDSRYTGN 279
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
+S G KLSRHN + Q TET+L+ L+ Q D HS + L+HP G QLHK I
Sbjct: 280 AISLGAKLSRHNFDIHQTAAGTETQLNGLTLVNGQQVADTHSAVFLNHPHGVINQLHKAI 339
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
V A+F+G + V R AQ TDA QL R+LLL + VN KP L+I+AD+VKC+HGA
Sbjct: 340 V-DDRAHAIFNGRIVVPRAAQMTDATQLNRNLLLSAKGRVNTKPQLEIVADNVKCAHGAT 398
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+S LE ++FY ++RG+D +T+R L+ +F AE++E+ P S++
Sbjct: 399 VSQLEADEIFYLRSRGLDEKTSRNLLIDAFAAEILEKLPLVSLK 442
>gi|209527508|ref|ZP_03276011.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
gi|423062206|ref|ZP_17050996.1| FeS assembly protein SufD [Arthrospira platensis C1]
gi|209492057|gb|EDZ92409.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
gi|406716114|gb|EKD11265.1| FeS assembly protein SufD [Arthrospira platensis C1]
Length = 458
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 215/442 (48%), Gaps = 75/442 (16%)
Query: 48 FVIQLAESLEDSLPSSSSSLPQPLPL--------QKLRDSSSQTLLSTPWPSRKDEPFRF 99
++ QL + SLP +P PL Q +RD+++ + P+R+ E +RF
Sbjct: 12 YLNQLLNRVRGSLP-----IPASFPLERNIAEQLQNIRDNAASWVKELAIPTRRHEDWRF 66
Query: 100 TDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNLPDGVYV 154
TD S + QP T S D + P LV ++GF L NLPDGV+V
Sbjct: 67 TDLSALLELPFQPATAVELSRDEISPLILPEVKGTRLVFVNGFYSPQLSCLDNLPDGVFV 126
Query: 155 GSLLGVSDGIMKRVSDFISEF-QCGDLFWSINGMGAPDLGVI------------------ 195
G+L + + ++ +++++ ++F ++N D V+
Sbjct: 127 GNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNTSSLADAAVVWVHQNQVIDTPIHLLFIS 186
Query: 196 ----------------------------YVPAEGNDC--------YWANSVLEVVIGKGG 219
Y A C Y+ N+V E+ +G
Sbjct: 187 LSSSQPVTSQPRTLIVAEPGSKATVIEHYATANILGCSDRTQKTPYFTNTVTELWVGDNA 246
Query: 220 KVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELS 279
+++H+ LQ + ++ HI T V Q +S Y +S G KLSRHN + Q TET+L+
Sbjct: 247 ELQHTRLQRELASSFHIGRTVVSQGRSSRYTGNAISLGAKLSRHNFDIHQTAVGTETQLN 306
Query: 280 SFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQ 339
L+ Q D HS + L+HP G QLHK IV A+F+G + V + AQ TDA Q
Sbjct: 307 GLTLVNGQQVADTHSAVFLNHPHGVINQLHKAIV-DDRAHAIFNGRIVVPQAAQMTDATQ 365
Query: 340 LTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALV 399
L R+LLL + VN KP L+I+AD+VKC+HGA +S LE ++FY ++RG+D +T+R L+
Sbjct: 366 LNRNLLLSAKGRVNTKPQLEIVADNVKCAHGATVSQLEADEIFYLRSRGLDEKTSRNLLI 425
Query: 400 FSFGAEVIERFPYPSIRNQVVS 421
+F AE++E+ P S++ Q++S
Sbjct: 426 DAFAAEILEKLPLVSLK-QILS 446
>gi|434407798|ref|YP_007150683.1| Iron-regulated ABC transporter permease protein SufD
[Cylindrospermum stagnale PCC 7417]
gi|428262053|gb|AFZ28003.1| Iron-regulated ABC transporter permease protein SufD
[Cylindrospermum stagnale PCC 7417]
Length = 456
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 212/409 (51%), Gaps = 58/409 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
LQ+LRD ++ + + P+ ++E +RFTD S ++ Q + SL ++ +A
Sbjct: 45 LQELRDGAANWVRHSTIPTTREEEWRFTDLSELRKVQFNLGRLETISLQPNILPEAANSR 104
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGA 189
LV ++G +++LP G+ V +L + + + V F+++ + ++F ++N G
Sbjct: 105 LVFVNGVYAPELSAVADLPRGIVVSNLALLDN--YQVVQPFLAQSEGAREVFTALNTAGL 162
Query: 190 PD---------------LGVIYVPAEGND------------------------------- 203
D + +++V G
Sbjct: 163 TDAAVVLVGKNVVVETPIHLLFVSVVGETPTFSQPRCLVVAESGSQVTLVEEFTNRQDAK 222
Query: 204 ------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
Y+ N+V E+ + + +V H+ ++ + A H+ TAV Q S Y ++ G
Sbjct: 223 SAKEEGVYFTNAVTEIWLAENAEVSHTRVEMEGAGAIHVGKTAVTQARDSRYTCYAIAFG 282
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 317
GKL+RHN+ + Q G T+T L+ ++ S Q D HS + L++P G +QLHKCIV
Sbjct: 283 GKLTRHNLEILQAGEQTQTSLNGLTMIGSKQVADTHSAIALNYPHGSSKQLHKCIVGDR- 341
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
AVF+G V V + AQ TDA QL R+LLL P+A ++ KP L+I AD+VKC+HGA +S LE
Sbjct: 342 AHAVFNGKVFVPKPAQLTDAAQLNRNLLLSPKARIDTKPQLEITADNVKCAHGATVSQLE 401
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNL 426
+ ++FY Q+RGID ARK LV +F AE+I + P PS++ +++ V +L
Sbjct: 402 DDEIFYLQSRGIDENDARKLLVNAFAAEIINQIPVPSLQKILLNTVNSL 450
>gi|170078418|ref|YP_001735056.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
gi|34765745|gb|AAQ82449.1| SufD [Synechococcus sp. PCC 7002]
gi|169886087|gb|ACA99800.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
Length = 452
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 205/398 (51%), Gaps = 59/398 (14%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLDVST- 124
Q Q +RD + + +PSR+DE +R TD S++K + Q P T ++ LDV
Sbjct: 35 QSAEFQAIRDQGLEKVRQGKFPSRRDEAWRVTDLSVLKHTTFQAAQPTTPTAADLDVFAL 94
Query: 125 -DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE-FQCGDLFW 182
+ LV ++G +S LPDGV+VG+ ++ ++ ++ + + D+F
Sbjct: 95 PETANSRLVFVNGHYAPDQSCVSGLPDGVFVGNFTALAADQKAAIAKYLGQQTEQLDVFA 154
Query: 183 SINGMGAPDLGVIYVP-----------------------------------AEGN----- 202
++N G DL +++VP A+ N
Sbjct: 155 ALNDAGLGDLAIVWVPKNTVVEQPIQLLFVGNGADQPTAMQSRCLVIAETGAQANVVEYY 214
Query: 203 -----DC-------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 250
C Y+ N++ EV + ++ H +Q ++ A H+ TA+ Q S Y+
Sbjct: 215 GAIAQGCTDQDTHRYFNNALTEVWVQTNARLNHVRVQREAGGAIHLGNTAIAQAQDSHYQ 274
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 310
L EV+ G +LSRH + + Q GP TET L ++ ++Q D H+ + L HP G QLHK
Sbjct: 275 LTEVNFGARLSRHTLTLTQNGPQTETILKGLTMVGAEQLSDTHTAVYLQHPYGSVDQLHK 334
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
CI+ + ++VF+G + V + AQ T+A QL R+LLL P+A V+ KP LQI AD+VKC+HG
Sbjct: 335 CIIDDA-ARSVFNGQIHVPQKAQMTNAAQLNRNLLLSPKAKVDTKPELQITADNVKCAHG 393
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
A +S LE ++FY ++RG++ AR L+ +F AE+++
Sbjct: 394 ATVSQLEAEEIFYLRSRGLNDYDARHLLIDAFAAEILD 431
>gi|425469710|ref|ZP_18848623.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389880400|emb|CCI38830.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 441
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 201/400 (50%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
LV ++G Q ++S LP GV VG+L G+SDG
Sbjct: 93 HLVFVNGIYQPELSDISALPPGVSVGNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDG 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEHCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ V Q G TET L ++ QT D HS + L+HP G +QLHKCIV S
Sbjct: 273 LCRHNLDVLQKGAQTETNLYGLAMITGQQTADTHSAIYLNHPHGITKQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA +S LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|443667505|ref|ZP_21133952.1| feS assembly protein SufD [Microcystis aeruginosa DIANCHI905]
gi|159027408|emb|CAO86892.1| sufD [Microcystis aeruginosa PCC 7806]
gi|443330996|gb|ELS45677.1| feS assembly protein SufD [Microcystis aeruginosa DIANCHI905]
Length = 441
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 199/400 (49%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVST--DAQFP 129
+LR+S + P RKDE ++FTD S + + QP+T ++L V +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQPVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
LV ++G Q ++S LP GV V +L G+SDG
Sbjct: 93 RLVFVNGIYQPELSDISALPSGVRVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDG 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHNLIVAETGASVNIIENYGALAEHCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA IS LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATISQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|354567898|ref|ZP_08987065.1| FeS assembly protein SufD [Fischerella sp. JSC-11]
gi|353541572|gb|EHC11039.1| FeS assembly protein SufD [Fischerella sp. JSC-11]
Length = 446
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 201/395 (50%), Gaps = 56/395 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
LQ++RD ++ + + P+ +DE +RFTD S ++ + T + SL D+ +A
Sbjct: 45 LQQVRDRAANWVRHSVLPTTRDEEWRFTDLSALRQVKFNVETLHAKSLQPDILPEAANSR 104
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD-GIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G ++ LP GV V +L S G+ K ++ D+F ++N G
Sbjct: 105 LVFVNGIYVPELSVVAGLPKGVVVSNLDAASQLGVQKYLARAEGAL---DVFTALNTAGI 161
Query: 190 PDLG---------------VIYVPA----------------------------------E 200
D+ ++++ A
Sbjct: 162 NDVAVVWVPKDVVVETPIHLVFIAAGDQPFISQPRCLVVAESGSQVSLVEEYRNRHDAKN 221
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
+ Y +N+V E+ + +V H+ ++ S A HI TAV Q S Y +S GG++
Sbjct: 222 AKEVYLSNAVTEIWLEDNAQVNHTRVEWDSREAFHIGKTAVTQGRYSRYTCNAISLGGRV 281
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
SRHN+ + Q G TET L+ ++ +Q D HS + L++P G RQLHK IV A
Sbjct: 282 SRHNLEILQTGEQTETNLNGLTVIGGNQLADTHSAIALNYPYGTSRQLHKTIVGDR-AHA 340
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+G V V + AQ TDA QL R+LLL +A V+ KP L+I AD+VKC+HGA +S LE+ +
Sbjct: 341 VFNGKVFVPKLAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDE 400
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
+FY Q+RGID E+AR LV +F AE+I + P PS+
Sbjct: 401 IFYLQSRGIDEESARSLLVHAFAAEIIHQIPVPSL 435
>gi|427722164|ref|YP_007069441.1| iron-regulated ABC transporter permease SufD [Leptolyngbya sp. PCC
7376]
gi|427353884|gb|AFY36607.1| Iron-regulated ABC transporter permease protein SufD [Leptolyngbya
sp. PCC 7376]
Length = 450
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 219/444 (49%), Gaps = 67/444 (15%)
Query: 42 ATFSDPF---------VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSR 92
A+F +P ++QLAE+ + S+ L++LR + + +P++
Sbjct: 9 ASFDNPITMLDLSLSPLLQLAETNKTVFNQGSTGW-----LKELRTQGAYKVSHAIFPTK 63
Query: 93 KDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVSTD---AQFPSLVLIDGFIQNSALNLSNL 148
+DE +R TD S +++++ + T + D++T+ LV ++G N L
Sbjct: 64 RDEDWRVTDISTLRATRFLNAKTYELDAADIATELVGEAIHQLVFVNGKFSAELSNTEEL 123
Query: 149 PDGVYVGSLLGVSDGIMKRVSDFIS-EFQCGDLFWSINGMGAPDLGVIYVP--------- 198
P+G++VG+L +S + + +I + D+F ++N G D+ +I+
Sbjct: 124 PEGLFVGNLAQLSADQAEELIKYIGVHSRERDVFAALNNAGFHDVAIIWAEKNVVVEAPI 183
Query: 199 --------------------------------------AEGNDCYWANSVLEVVIGKGGK 220
G Y+ N++ E+ + + +
Sbjct: 184 QVLFVNQAAGRPTAMQTRCLAIASPSSSFSLIEQYVGRGSGEQTYFNNALTEIFVQENAE 243
Query: 221 VRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSS 280
++H +Q + NA HI T V Q S Y + EV+ GGKLSRH++ + Q G TET L
Sbjct: 244 IKHVRVQQEIPNATHISNTIVGQSQHSRYSITEVNLGGKLSRHSLTIHQEGVQTETNLKG 303
Query: 281 FHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQL 340
+L +Q D HS + L+ P G QLHKCIV S ++VF+G V V + AQ T+A QL
Sbjct: 304 LAILDGEQVCDTHSDVQLNFPHGTVDQLHKCIVDDS-ARSVFNGRVCVPQNAQMTNAAQL 362
Query: 341 TRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVF 400
R+LLL +A V+ KP L+I AD+VKC+HGA +S LE ++FY ++RG+D AR LV
Sbjct: 363 NRNLLLSSKARVDTKPELEITADNVKCAHGATVSQLEADEIFYLRSRGLDENAARYLLVD 422
Query: 401 SFGAEVIERFPYPSIRNQVVSHVK 424
+F E++ PS+R ++ V+
Sbjct: 423 AFATEILAAITIPSLREKISKQVR 446
>gi|428771190|ref|YP_007162980.1| iron-regulated ABC transporter permease SufD [Cyanobacterium
aponinum PCC 10605]
gi|428685469|gb|AFZ54936.1| Iron-regulated ABC transporter permease protein SufD
[Cyanobacterium aponinum PCC 10605]
Length = 455
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 208/411 (50%), Gaps = 61/411 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLD--VSTDAQ 127
+Q++R ++ ++ P+ KDE +RFTD S + + QP + +L + +A
Sbjct: 39 VQEIRRKAANKVVKLNLPTTKDESWRFTDLSELYKQDLVYAQPQDLENQTLQEFILKEAS 98
Query: 128 FPSLVLIDGFIQNSALNLSNL-PDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSIN 185
LV ++G+ Q + + S L + +YVG+L + D ++++ ++++ + ++F ++N
Sbjct: 99 NSRLVFVNGYYQANLSDTSGLNSEQIYVGNLTNLDDDKQEKIAQYLAKNEPENEVFTALN 158
Query: 186 GMGAPDLGVIYVPA-------------------------------EGNDC---------- 204
D V++V A E N
Sbjct: 159 STSLNDAFVVWVKANQEIKTPIHLLHLSVKEKTGSWHQPRILVVAEANSVLEFIEYYGAT 218
Query: 205 ------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
Y+ N+V E+ + +V H+ +Q +S + HI T V Q S Y +
Sbjct: 219 SFGCSDSARQQYYFTNAVTEIHLLDNAQVNHNRIQRESGDGFHIAQTMVNQAKNSRYTIN 278
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
E+S GGKL RHN+ V Q G TET L +L Q D HS + L+HP G QLHK I
Sbjct: 279 EISLGGKLYRHNLQVNQEGEQTETYLHGLTMLQGKQLGDTHSEVNLNHPYGTVNQLHKYI 338
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ + G VF+G V V + AQ T+A QL R+LLL P+A +N KP LQI AD+VKC+HGA
Sbjct: 339 LDDA-GHGVFNGRVYVPKLAQLTNAAQLNRNLLLSPKARINTKPELQITADNVKCAHGAT 397
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+S LE ++FY ++RG++ AR L+ +F AE+I+ P+ S+R ++ V
Sbjct: 398 VSQLEADEIFYLRSRGLNEYDARHLLIDAFAAEIIDNIPFASLRQRLTQCV 448
>gi|427706857|ref|YP_007049234.1| iron-regulated ABC transporter permease SufD [Nostoc sp. PCC 7107]
gi|427359362|gb|AFY42084.1| Iron-regulated ABC transporter permease protein SufD [Nostoc sp.
PCC 7107]
Length = 453
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 215/421 (51%), Gaps = 60/421 (14%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV--S 123
S+ + LQ+LR ++ + + P+ ++E +RFTD S ++ + + +P +++ V
Sbjct: 37 SVTEADGLQELRQQAANWVRHSTIPTTREEEWRFTDLSELRGVEFRK-AQPVNNVAVLKV 95
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS-DGIMKRVSDFISEFQCG-DLF 181
T LV ++G + L+ NLPDG+ VG+L G++ +G R+ ++++ + ++F
Sbjct: 96 TSLTDNRLVFVNG-VYAPELSAVNLPDGIVVGNLAGLTVEG--DRIRKYLAQAEGALEVF 152
Query: 182 WSINGMGAPD---------------LGVIYVPAEGNDC---------------------- 204
++N G D + ++++ G
Sbjct: 153 TALNTAGLTDAAVVWVGKNVVVDTPIHLLFISVAGETATISQPRCLVVAETGSQVTLVEE 212
Query: 205 --------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 250
Y+ N+V EV +G+ V H+ ++ + A H+ TAV Q S Y
Sbjct: 213 FTNRRDTEGAEGKSYFTNAVTEVWVGENAAVNHTRVELEGAEAFHVGKTAVNQARYSRYT 272
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 310
S G KLSRHN+ + Q G TET L+ ++ Q D HS + L++P G QLHK
Sbjct: 273 CNAFSLGAKLSRHNLEILQTGEQTETTLNGLAMISGKQVADTHSAIALNYPYGKSEQLHK 332
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
CIV AVF+G V V + AQ TDA QL R+LLL +A V+ KP L+I AD+VKC+HG
Sbjct: 333 CIVGDR-AHAVFNGKVFVPKPAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHG 391
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
A +S LE+ ++FY Q+RGID AR L+ +F E+I + P S+R+ +++ V + T
Sbjct: 392 ATVSQLEDDEIFYLQSRGIDESAARNLLINAFATEIINKVPVASLRDILLNTVTSFKSLT 451
Query: 431 D 431
+
Sbjct: 452 N 452
>gi|428220268|ref|YP_007104438.1| FeS assembly protein SufD [Synechococcus sp. PCC 7502]
gi|427993608|gb|AFY72303.1| FeS assembly protein SufD [Synechococcus sp. PCC 7502]
Length = 434
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 203/406 (50%), Gaps = 62/406 (15%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----------SQIQPITRPSSS 119
P L+ LR +S L +P+ KDE +R D S ++ PIT P +
Sbjct: 20 PAWLRTLRSEASDRLNYLKFPTPKDEEWRNNDFSELRDIGFALVNAVDKSEDPITNPINI 79
Query: 120 LD--VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL-----LGVSDGIMKRVSDFI 172
LD + ++ + IDG L LP GV++GSL LG+ + +S +
Sbjct: 80 LDAHILPESAESLITFIDGRFSIEFSALEGLPTGVFIGSLNNFNHLGID--LTASLSPHL 137
Query: 173 SEF-QCGDLFWSINGMGAPDLGVIYVPAEGN----------------------------- 202
++ D F ++N D+ V+Y+P N
Sbjct: 138 GKYADAEDFFVALNTASIDDVAVVYIPKNLNFIPTVQLLFASHQNTISQPRCLVIVESGG 197
Query: 203 ------------DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 250
++ NSV E+ +G ++ H+ +Q +S A I A+ Q+ +S Y
Sbjct: 198 SLNLVETHIGQDSLHFCNSVTEIYVGANARINHTKVQTESDQAIWISNCAIVQQRSSAYI 257
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 310
+ G K SR N+H+QQLG TET L+ L+ +Q D HS++ + P G +QLHK
Sbjct: 258 KNSIVLGAKKSRTNLHIQQLGEHTETSLNGLTLIGGEQIADTHSQIAHNFPNGTSQQLHK 317
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
CI A +F+G + V++ AQ T++ QL+R+LLL P+A ++ KP L+I AD+VKC+HG
Sbjct: 318 CI-ADERSHCIFNGKILVSQAAQLTNSKQLSRNLLLSPKARIDTKPQLEIFADNVKCAHG 376
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
A IS ++ +LFY Q+R IDLE+A+K L ++F AEVI + P S+R
Sbjct: 377 ATISQIDADELFYLQSRCIDLESAKKLLTYAFAAEVITQIPVDSLR 422
>gi|425438288|ref|ZP_18818693.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676593|emb|CCH94429.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 441
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 200/400 (50%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
+V ++G Q ++S LP GV V +L G+SDG
Sbjct: 93 CIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKNPEFFTALNQAGLSDG 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEHCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + QE S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQERDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA +S LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|425463003|ref|ZP_18842466.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389823782|emb|CCI27750.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 441
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 200/400 (50%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
+V ++G Q ++S LP GV V +L G+SDG
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDG 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEHCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + QE S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEVNAEVIHTRVQRESGDGFHIGRTIIEQERDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA +S LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|425452572|ref|ZP_18832389.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765610|emb|CCI08566.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 441
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 200/400 (50%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
LV ++G Q ++S LP GV V +L G+SDG
Sbjct: 93 HLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDG 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEHCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G +QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIAKQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA +S LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|428207029|ref|YP_007091382.1| iron-regulated ABC transporter permease SufD [Chroococcidiopsis
thermalis PCC 7203]
gi|428008950|gb|AFY87513.1| Iron-regulated ABC transporter permease protein SufD
[Chroococcidiopsis thermalis PCC 7203]
Length = 467
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 155/256 (60%), Gaps = 14/256 (5%)
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQ 227
V D++++F D P+ G V G Y+ N+V E+ +G+ +V H+ ++
Sbjct: 215 VEDYLNQFNIED----------PEEGEAEV---GETVYFTNAVTEIWLGENAQVSHTRVE 261
Query: 228 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 287
+S+ A HI TA+ Q S Y ++ G KLSRHN+ + Q G TET L+ ++
Sbjct: 262 RESVEAFHIGKTAITQARDSRYTCNAITLGAKLSRHNLDIYQTGEQTETILNGLTIIAGQ 321
Query: 288 QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLE 347
QT D HS + L++P G RQLHKCIVA VF+G V V + AQ TDAGQL R+LLL
Sbjct: 322 QTADTHSAIALNYPYGMSRQLHKCIVADK-AHTVFNGRVFVAKAAQLTDAGQLNRNLLLS 380
Query: 348 PRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVI 407
+A V+ KP L+IIAD+VKCSHGA +S LE+ ++FY Q+RGI+ A+ LV +F AE+I
Sbjct: 381 SKARVDTKPQLEIIADNVKCSHGATVSQLEDDEIFYLQSRGINAADAQNLLVNAFAAEII 440
Query: 408 ERFPYPSIRNQVVSHV 423
+ P PS++ ++ V
Sbjct: 441 NQLPIPSLQQTLLKAV 456
>gi|428312510|ref|YP_007123487.1| iron-regulated ABC transporter permease SufD [Microcoleus sp. PCC
7113]
gi|428254122|gb|AFZ20081.1| Iron-regulated ABC transporter permease protein SufD [Microcoleus
sp. PCC 7113]
Length = 462
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 210/408 (51%), Gaps = 59/408 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSLDVSTDAQFPS- 130
L++LRD +++ + + P+++DE +RFTD S + Q P ++ + V+TD P
Sbjct: 52 LKQLRDRAARWVKTLSLPAKRDEDWRFTDLSPLLQVNFQTPESQAEITESVATDFALPEA 111
Query: 131 ---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G +++LP+G+ V +L + +V +++++ Q G ++F ++N
Sbjct: 112 SIRLVFVNGVYAPHLSAVTDLPEGLVVSNLAQLPVAYRSKVGNYLAQ-QPGSAEVFTALN 170
Query: 186 GMGAPDLGVIYVPAE--------------------------------------------- 200
D V++V
Sbjct: 171 TASLKDAAVVWVGKNQQVETPIHLLFISTVSKTPTVSLPRCLVVAESGSNLTLVEEYRNY 230
Query: 201 --GNDC---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
GND Y+ N+V E+V+ + ++ H+ + +S A HI +A+ Q S Y ++
Sbjct: 231 KCGNDVQKVYFTNAVTEIVLEENAQINHTRIDQESKGAFHIGKSAIAQSRYSRYIGNAIT 290
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
G KLSRH++ V Q G TET L+ L+ +Q D HS ++L+HP G QLHKCI+
Sbjct: 291 FGSKLSRHHLEVFQTGEGTETTLNGLALIGGEQVADTHSAIVLNHPNGTANQLHKCII-D 349
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
QA+F+G V V + AQ T+A QL R+LLL +A V+ KP L+I AD VKC+HGA +S
Sbjct: 350 DRAQAIFNGKVFVPQTAQFTNASQLNRNLLLSSKARVDTKPQLEITADQVKCAHGATVSQ 409
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
LE +FY Q+RGI+ AR+ L+ +F AE+I+ P S+R ++ V
Sbjct: 410 LEADDIFYLQSRGINAVNARELLLDAFAAEIIKGIPVASMRQKLTRCV 457
>gi|390440154|ref|ZP_10228505.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389836438|emb|CCI32631.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 441
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 199/400 (49%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
LV ++G Q ++S LP GV V +L G+SDG
Sbjct: 93 HLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDG 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEHCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA +S LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|440756054|ref|ZP_20935255.1| feS assembly protein SufD [Microcystis aeruginosa TAIHU98]
gi|440173276|gb|ELP52734.1| feS assembly protein SufD [Microcystis aeruginosa TAIHU98]
Length = 441
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 199/400 (49%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAHELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
+V ++G Q ++S LP GV V +L G+SDG
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDG 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEYCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA IS LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATISQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|443323166|ref|ZP_21052175.1| FeS assembly protein SufD [Gloeocapsa sp. PCC 73106]
gi|442787076|gb|ELR96800.1| FeS assembly protein SufD [Gloeocapsa sp. PCC 73106]
Length = 440
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 206/406 (50%), Gaps = 62/406 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLDVST--DAQ 127
+ +L + + L + P + DE +RFTD S +K ++ P+ +L+ T +AQ
Sbjct: 29 ITELSNQALTALANQSLPQKSDEDWRFTDLSELKKLSLRLASPVEVTKQALEQFTLPEAQ 88
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS-EFQCGDLFWSING 186
+V ++G + + S LP G+Y+G+L G+ + + +++S ++Q D+F +N
Sbjct: 89 HSRIVFVNGVYVSELSDTSGLPPGIYLGNLAGLEEAKKPELIEYLSRDYQ--DVFSLLNT 146
Query: 187 MGAPDLGVIYVP-------------------------------AEGN------------- 202
G D+ + +V A+ N
Sbjct: 147 GGLKDIAIAWVEPDVVVTTPIHLLYLTVPESDPILVQPRTLVVAQKNSQLEIVEYYGAIT 206
Query: 203 -DC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
DC Y N+V ++V+ + +++HS +Q +S + I T V Q+ S Y L E
Sbjct: 207 QDCSDQPHNLPYCNNAVTDIVLHENAQLKHSRVQRESGDGLSIANTCVEQDQDSSYTLWE 266
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
++ G KL RHN+ V+Q G T T L L+ Q D HS + L HP G Q HKCIV
Sbjct: 267 INLGAKLFRHNLKVKQTGAQTTTNLQGLILVGGKQVTDTHSTVALAHPHGVVNQNHKCIV 326
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
Q VF+G + V + AQ T+A Q+ R+LLL P+ VN KP LQI AD+VKC+HGA +
Sbjct: 327 -DGQAQVVFNGKIIVPQKAQLTNAAQINRNLLLSPQGRVNTKPELQITADNVKCTHGATV 385
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
S LE ++FY ++RG+ AR L+ +F AE++++ P PS+R ++
Sbjct: 386 SQLETDEVFYLRSRGLSEIDARHLLLEAFAAEILDQLPIPSLRKRL 431
>gi|166365048|ref|YP_001657321.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
gi|425465457|ref|ZP_18844766.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|166087421|dbj|BAG02129.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
gi|389832299|emb|CCI24210.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 441
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 198/400 (49%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + + + +A+
Sbjct: 33 ELRESGASKAHELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALATFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
+V ++G Q ++S LP GV V +L G+SDG
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDG 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEYCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTTDTHSAIYLNHPHGIANQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA +S LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSTDTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|416376182|ref|ZP_11683447.1| Iron-sulfur cluster assembly protein SufD [Crocosphaera watsonii WH
0003]
gi|357266426|gb|EHJ15056.1| Iron-sulfur cluster assembly protein SufD [Crocosphaera watsonii WH
0003]
Length = 449
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 209/419 (49%), Gaps = 62/419 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSSSLDVSTDAQ 127
L LR ++ + P +KDE +RFTD S + + + +++ + +A+
Sbjct: 34 LHTLRKNAVSQVQELTLPKKKDEEWRFTDLSKLYELDLTIGKTEAVSKNIVDQFILPEAK 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSING 186
LV ++G + N+S L +GV VG+L +SD +++ +++ + + D F ++N
Sbjct: 94 QSYLVFVNGEYASELSNVSALSEGVSVGNLSHLSDAQTEKIVNYLGKSEGEKDTFSALNT 153
Query: 187 MGAPDLGVIY-------------------------------VPAEG-------------- 201
G D VI+ V AE
Sbjct: 154 AGLSDAAVIWINKNVVLETPIMVLFLAVSSETASLIQPRTLVIAETGSSATLVEYYGTIT 213
Query: 202 --------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
N+ Y+ NSV E+ + + H+ +Q + N+ HI + + Q S Y E
Sbjct: 214 EQSLDVKQNEPYFTNSVTEICLDGNAHINHNRIQRELGNSFHIGRSIITQNQDSHYTCNE 273
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
++ G K+SRH + + Q G TE+ L+ ++ ++Q D H+ + L+HP G QLHKCI+
Sbjct: 274 INLGAKVSRHTLQIIQNGTQTESNLNGLTMIGNEQVADTHTAVCLNHPHGVTHQLHKCIM 333
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ + VF+G + V + AQ T A QL R+LLL P+A +N KP LQI AD+VKCSHGA I
Sbjct: 334 DGN-SRGVFNGKIFVPKPAQLTSATQLNRNLLLSPKARINTKPELQITADNVKCSHGATI 392
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
S LE +LFY Q+RG++ AR L+ +F AE++ER P S++ + V + TT+V
Sbjct: 393 SQLEADELFYLQSRGLNESDARHLLIDAFAAEILERIPLDSLQQSLTKCV--VAQTTEV 449
>gi|359463776|ref|ZP_09252339.1| FeS assembly protein SufD [Acaryochloris sp. CCMEE 5410]
Length = 434
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 203/409 (49%), Gaps = 58/409 (14%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD-- 125
P P L+K+R S+ + PS +DE +RFTD S + + T S SL+
Sbjct: 32 PNPKGLEKVRASALSIIQERGLPSNRDEDWRFTDLSGLYKTAFTAPTAASLSLEEIAPFI 91
Query: 126 -AQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A+ P LV ++G+ + NLP G+ V +L + + + + ++F +
Sbjct: 92 LAEAPVRLVFVNGWFAPDLSEIDNLPAGLSVSTLADAGN-----LPELGQQPGMTEVFTA 146
Query: 184 INGMGAPDLGVI------------------------------YVPAEGNDC--------- 204
+N D+ V+ V AE N
Sbjct: 147 LNTASFADVAVLRIAKNQVIEAPIHLLYLTTGDTPIVTSPRGLVVAEANSAATLIEEYTA 206
Query: 205 -----YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
Y+ N+V EV +G+ ++ H +Q ++ A HI TAV Q+ S Y L +S GG+
Sbjct: 207 VKTASYFTNAVTEVSLGQNAQLHHYRIQREAKTAFHIGTTAVSQDRDSRYALTSLSLGGQ 266
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
+SRHN V T+T L+ L V Q D HS L P +QLHKCIV +L +
Sbjct: 267 MSRHNPVVVPTAEQTDTTLNGLTLAVDQQVADTHSDLSFTSPHCTAQQLHKCIV-DNLAR 325
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G V V + AQQT+A QL+R+LLL +A V+ KP L+IIADDVKC+HGA +S L++
Sbjct: 326 AVFNGRVFVPKLAQQTNASQLSRNLLLSAKARVDTKPQLEIIADDVKCAHGATVSQLDDE 385
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR----NQVVSHVK 424
++FY Q+RG+D +A LV F AE+I++ P R N V+S ++
Sbjct: 386 EVFYLQSRGLDRNSACDLLVEGFAAEIIDQLPIAEQRQTLLNAVLSQIR 434
>gi|428779546|ref|YP_007171332.1| FeS assembly protein SufD [Dactylococcopsis salina PCC 8305]
gi|428693825|gb|AFZ49975.1| FeS assembly protein SufD [Dactylococcopsis salina PCC 8305]
Length = 447
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 212/428 (49%), Gaps = 60/428 (14%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L++ LE + S+ + LQK + ++ + + +P RK+E +RFTD S + Q Q
Sbjct: 22 LSQRLESQIAEDDSTFK--VWLQKRQQEAANWVAESKFPHRKEEEWRFTDLSPLLDYQFQ 79
Query: 112 PITRPSS------SLDVST--DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
RP+S S++ T + LV ++G + LP GV + SL +
Sbjct: 80 ---RPASIAPNQESIEPFTLPECSQTRLVFVNGRYAPQLSQVDQLPAGVTMTSLAELDVH 136
Query: 164 IMKRVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAE--------------GNDC---- 204
+V+D++++ + G+ LF ++N G D +++V G +
Sbjct: 137 QQSQVTDYLTQQEGGEELFTALNTAGFEDTAIVWVAVNTEVETPLHLLFLSVGEETPQFI 196
Query: 205 ---------------------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 237
Y+ N V EV + +V H LQ ++LN+ HI
Sbjct: 197 QPRLLVVAETSAKVSFIEQYVGLTTAPYFCNPVTEVWLAPNAEVNHVRLQEEALNSFHIG 256
Query: 238 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 297
TAV Q S Y VS GG+LSRH+ V + G TET L L +Q D HS +
Sbjct: 257 KTAVMQAQDSRYTCSPVSMGGRLSRHDFDVIKDGTQTETRLRGLTLGNGEQLLDTHSAIA 316
Query: 298 LDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPN 357
HP QLHKCI+ + + VF+G + V + AQQTDA QL R+LLL +A V+ KP
Sbjct: 317 FRHPHSSAEQLHKCILDKA-ARGVFNGKMFVPQAAQQTDASQLNRNLLLSEKAHVDTKPE 375
Query: 358 LQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
L I AD+VKC+HGA +S LE +LFY ++RG+D + A L+ +F AE+I+ P S+R
Sbjct: 376 LNITADNVKCAHGATVSQLEADELFYLRSRGLDNKAASNLLINAFAAEIIDEIPVLSVRE 435
Query: 418 QVVSHVKN 425
++ + ++N
Sbjct: 436 KLFNSLQN 443
>gi|16331746|ref|NP_442474.1| hypothetical protein slr0076 [Synechocystis sp. PCC 6803]
gi|383323489|ref|YP_005384343.1| hypothetical protein SYNGTI_2581 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326658|ref|YP_005387512.1| hypothetical protein SYNPCCP_2580 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492542|ref|YP_005410219.1| hypothetical protein SYNPCCN_2580 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437810|ref|YP_005652535.1| hypothetical protein SYNGTS_2582 [Synechocystis sp. PCC 6803]
gi|451815898|ref|YP_007452350.1| hypothetical protein MYO_126070 [Synechocystis sp. PCC 6803]
gi|3024874|sp|Q55792.1|Y076_SYNY3 RecName: Full=UPF0051 protein slr0076
gi|1001707|dbj|BAA10544.1| slr0076 [Synechocystis sp. PCC 6803]
gi|339274843|dbj|BAK51330.1| hypothetical protein SYNGTS_2582 [Synechocystis sp. PCC 6803]
gi|359272809|dbj|BAL30328.1| hypothetical protein SYNGTI_2581 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275979|dbj|BAL33497.1| hypothetical protein SYNPCCN_2580 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359279149|dbj|BAL36666.1| hypothetical protein SYNPCCP_2580 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960620|dbj|BAM53860.1| hypothetical protein BEST7613_4929 [Bacillus subtilis BEST7613]
gi|451781867|gb|AGF52836.1| hypothetical protein MYO_126070 [Synechocystis sp. PCC 6803]
Length = 453
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 202/404 (50%), Gaps = 64/404 (15%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF-------P 129
R ++ L S P ++DE ++FTD S +K+ I + SLDV+ F
Sbjct: 44 RQGAADLLGSLRLPHKRDEEWQFTDLSELKA--IDFVAAGKVSLDVAAAENFYLPEAHQS 101
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMG 188
LV I+GF N ++LP + S ++ +++++++ + G ++F ++N G
Sbjct: 102 RLVFINGFFTPELSNTNDLPSAITCQSWTNLAAHQREQLANYLGQKTDGNEVFSNLNTAG 161
Query: 189 APDLGVIYVPA-------------------------------EGN--------------D 203
D V+++PA E N +
Sbjct: 162 MTDSAVVWIPANTELKSPIHLLFLTVVDPTPIMVQPRLLVVVENNAQVTIAESYGAISTN 221
Query: 204 C--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
C Y+ N V E+ +G+ +V H Q S ++ HI TA+ Q S Y L++V+
Sbjct: 222 CTDRPQQQPYFNNIVSEIYLGENAQVTHIRNQRDSGDSFHIATTAIAQGKQSRYRLIDVN 281
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
G KLSRHN+ + Q T+TE + +L Q D HS + L+HP G QLHKCIV
Sbjct: 282 LGAKLSRHNLQMTQQEEATKTEFLALTILAGRQVSDTHSTIALNHPHGATNQLHKCIV-D 340
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
QAVF G V V + AQ T+A QL R+L+L +A +N KP LQI AD+VKCSHGA IS
Sbjct: 341 EYAQAVFSGKVLVPQAAQLTNAQQLNRNLVLSSKARINTKPELQITADNVKCSHGATISQ 400
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LE ++FY ++RG++ AR L+ +F E++++ P S++ ++
Sbjct: 401 LEADEVFYLRSRGLNDYDARHLLIDAFAGEILDQIPLASLQGRL 444
>gi|422303635|ref|ZP_16390986.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791391|emb|CCI12817.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 441
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 198/400 (49%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
+V ++G Q ++S LP GV V +L G+SD
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDV 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEHCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA +S LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|291567130|dbj|BAI89402.1| FeS assembly protein SufD [Arthrospira platensis NIES-39]
Length = 458
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 201/404 (49%), Gaps = 61/404 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
LQ +RD+++ + P+R+ E +RFTD S + +++ ++R S + + +
Sbjct: 40 LQNIRDNAASWVKELAIPTRRHEDWRFTDLSALLELPFQAATAVELSREEISPLILPEVK 99
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++GF L NLPDGV+VG+L + + ++ +++++ ++F ++N
Sbjct: 100 GTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNT 159
Query: 187 MGAPDLGVI----------------------------------------------YVPAE 200
D V+ Y A
Sbjct: 160 SSLADAAVVWVHQNQVIDTPIHLLFISLSSSQPVTSQPRILIVAEPGSKATVIEHYATAN 219
Query: 201 GNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
C Y+ N+V E+ +G +++H+ LQ + ++ HI T V Q S Y
Sbjct: 220 ILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQRELASSFHIGRTVVSQGRDSRYTGN 279
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
+S G KLSRHN + Q TET+L+ L+ Q D HS + L+HP G QLHK I
Sbjct: 280 AISLGAKLSRHNFDIHQTAAGTETQLNGLTLVNGQQVADTHSAVFLNHPHGVINQLHKAI 339
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
V +F+G + V + AQ TDA QL R+LLL + VN KP L+I+AD+VKC+HGA
Sbjct: 340 V-DDRAHGIFNGRIVVPQAAQMTDATQLNRNLLLSAKGRVNTKPQLEIVADNVKCAHGAT 398
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+S LE ++FY ++RG+D +T+R L+ +F AE++++ P S++
Sbjct: 399 VSQLEADEIFYLRSRGLDEKTSRNLLIDAFAAEILDKLPLVSLQ 442
>gi|409990930|ref|ZP_11274242.1| FeS assembly protein SufD [Arthrospira platensis str. Paraca]
gi|409938204|gb|EKN79556.1| FeS assembly protein SufD [Arthrospira platensis str. Paraca]
Length = 458
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 201/404 (49%), Gaps = 61/404 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
LQ +RD+++ + P+R+ E +RFTD S + +++ ++R S + + +
Sbjct: 40 LQNIRDNAASWVKELAIPTRRHEDWRFTDLSALLELPFQAATAVELSREEISPLILPEVK 99
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++GF L NLPDGV+VG+L + + ++ +++++ ++F ++N
Sbjct: 100 GTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNT 159
Query: 187 MGAPDLGVI----------------------------------------------YVPAE 200
D V+ Y A
Sbjct: 160 SSLADAAVVWVHQNQVIDTPIHLLFISLSSSQPVTSQPRLLIVAEPGSKATVIEHYATAN 219
Query: 201 GNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
C Y+ N+V E+ +G +++H+ LQ + ++ HI T V Q S Y
Sbjct: 220 ILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQRELASSFHIGRTVVSQGRDSRYTGN 279
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
+S G KLSRHN + Q TET+L+ L+ Q D HS + L+HP G QLHK I
Sbjct: 280 AISLGAKLSRHNFDIHQTAAGTETQLNGLTLVNGQQVADTHSAVFLNHPHGVINQLHKAI 339
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
V +F+G + V + AQ TDA QL R+LLL + VN KP L+I+AD+VKC+HGA
Sbjct: 340 V-DDRAHGIFNGRIVVPQAAQMTDATQLNRNLLLSAKGRVNTKPQLEIVADNVKCAHGAT 398
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+S LE ++FY ++RG+D +T+R L+ +F AE++++ P S++
Sbjct: 399 VSQLEADEIFYLRSRGLDEKTSRNLLIDAFAAEILDKLPLVSLQ 442
>gi|425439775|ref|ZP_18820090.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719921|emb|CCH96312.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 441
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 197/400 (49%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + + Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRVPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLL--------------------------GVSDG 163
+V ++G Q ++S LP GV V +L G+SD
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDV 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEYCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTTDTHSAIYLNHPHGIANQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA +S LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSTDTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|158334401|ref|YP_001515573.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
gi|158304642|gb|ABW26259.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
Length = 434
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 203/409 (49%), Gaps = 58/409 (14%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL---DVST 124
P P L+K+R+ + + PS +DE +RFTD S + + T S SL D
Sbjct: 32 PNPQGLEKVREGALSIVQERGLPSNRDEDWRFTDLSGLYKTAFTAPTAASLSLEEIDAFI 91
Query: 125 DAQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A+ P LV ++G+ + +LP G+ V +L + + + + ++F +
Sbjct: 92 LAEAPVRLVFVNGWFAPDLSTIDHLPAGLSVSTLADAGN-----LPELGQQPGLSEVFTA 146
Query: 184 INGMGAPDLGVIYVP------------------------------AEGNDC--------- 204
+N D+ V+ + AE N
Sbjct: 147 LNTASFADVAVLRIAKNQVIEAPIHLLYLTTGDTPIITSPRGLVIAEANSAATLIEEYAA 206
Query: 205 -----YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
Y+ NSV+EV +G+ ++ H +Q ++ A HI T+V Q+ S Y L +S GG+
Sbjct: 207 VNAASYFTNSVMEVSLGQNAQLHHHRIQREAKTAFHIGTTSVSQDRDSRYALTSLSLGGQ 266
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
+SRHN V T+T L+ L V Q D HS L P +QLHKCIV + +
Sbjct: 267 MSRHNPVVVPTAEQTDTTLNGLTLAVDQQVADTHSDLSFTGPHCTAQQLHKCIVDNR-AR 325
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G V V + AQQT+A QL+R+LLL +A V+ KP L+IIADDVKC+HGA +S L++
Sbjct: 326 AVFNGRVFVPKLAQQTNASQLSRNLLLSSKARVDTKPQLEIIADDVKCAHGATVSQLDDE 385
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR----NQVVSHVK 424
++FY Q+RG+D +A LV F AE+I++ P R N V+S ++
Sbjct: 386 EVFYLQSRGLDRNSACDLLVEGFAAEIIDQLPIAEQRQTLLNAVLSQIR 434
>gi|67920339|ref|ZP_00513859.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
gi|67857823|gb|EAM53062.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
Length = 449
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 207/419 (49%), Gaps = 62/419 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSSSLDVSTDAQ 127
L LR ++ + P +KDE +RFTD S + + + +++ + +A+
Sbjct: 34 LHTLRKNAVSQVQELTLPKKKDEEWRFTDLSKLYELDLTIGKTEAVSKNIIDQFILPEAK 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSING 186
LV ++G + N+S L +GV VG+L +SD +++ +++ + + D F ++N
Sbjct: 94 QSYLVFVNGEYASELSNVSALSEGVSVGNLSHLSDAQTEKIVNYLGKSEGEKDTFSALNT 153
Query: 187 MGAPDLGVIY-------------------------------VPAEG-------------- 201
G D VI+ V AE
Sbjct: 154 AGLSDAAVIWINKNVVLETPIMVLFLAVSSETASLIQPRTLVIAETGSSATLVEYYGTIT 213
Query: 202 --------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
N+ Y+ NSV E+ + + H+ +Q + N+ HI + + Q S Y E
Sbjct: 214 EQSLYVKQNEPYFTNSVTEICLDGNAHINHNRIQRELGNSFHIGRSIITQNQDSHYTCNE 273
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
++ G K+SRH + + Q G TE+ L+ ++ ++Q D H+ + L HP G QLHKCI+
Sbjct: 274 INLGAKVSRHTLQIIQNGTQTESNLNGLTMIGNEQVADTHTAVCLSHPHGVTHQLHKCIM 333
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ + VF+G + V + AQ T A QL R+LLL +A +N KP LQI AD+VKCSHGA I
Sbjct: 334 DGN-SRGVFNGKIFVPKPAQLTSATQLNRNLLLSTKARINTKPELQITADNVKCSHGATI 392
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
S LE +LFY Q+RG++ AR L+ +F AE++ER P S++ + V + TT+V
Sbjct: 393 SQLEADELFYLQSRGLNESDARHLLIDAFAAEILERIPLDSLQQSLTKCV--VAQTTEV 449
>gi|220908817|ref|YP_002484128.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
gi|219865428|gb|ACL45767.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
Length = 451
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 202/404 (50%), Gaps = 59/404 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ---IQPITRPSSSLDVSTDAQFP 129
+Q LRD ++ P+ ++E +RFTD S +++ Q I P P+ + +S
Sbjct: 48 VQDLRDRATALAQELTIPTTREEEWRFTDLSPLRTVQFTAIAPEQSPARAEQISGFVLPE 107
Query: 130 S---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSI 184
S LV ++G +L +P G+ VG+L G + +++ ++++ Q G ++F +
Sbjct: 108 SSLRLVFVNGRFAPELSDLQAIPSGLKVGTLAGQT----AQLNPYLAQ-QAGSEEIFTVL 162
Query: 185 NGMGAPDLGVI-------------------------------YVPAE------------- 200
N D VI V AE
Sbjct: 163 NTASFSDAAVIQVDRNQQIEAPLHLLFIAVPTSTPTIAHPRCLVMAETSSRLTLVEEYVT 222
Query: 201 -GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
G N+V E+ +G +V H +Q Q+L+ HI TAV Q S Y +S GG+
Sbjct: 223 VGTGVQLTNAVTEIWLGSNAEVNHIRIQAQALDGFHIGKTAVSQARDSRYTGQAISLGGQ 282
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
+SRHN+ V G T+T L+ L +Q D HS + P +QLHKCIV+ +
Sbjct: 283 ISRHNLEVHSAGEQTQTTLNGLTLATGEQLSDTHSTIAFTKPYCTSQQLHKCIVSDR-AR 341
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G V V + AQ TDA QL R+LLL P+A ++ KP L+I+AD+VKCSHGA +S LEE
Sbjct: 342 AVFNGKVFVPKAAQLTDAAQLNRNLLLSPKARIDTKPQLEIVADNVKCSHGATVSQLEED 401
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++FY ++RG++ + A LV F E++E P PS+R ++ + +
Sbjct: 402 EIFYLRSRGLNYQDASNLLVKGFAVEMLELIPVPSLRQRLTTQI 445
>gi|425456922|ref|ZP_18836628.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389801855|emb|CCI19029.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 441
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 199/400 (49%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P +KDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGKKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGV---------------YVG-----------SLLGVSDG 163
LV ++G Q ++S LP GV Y+G + G+SD
Sbjct: 93 RLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDV 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVAANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEYCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LYRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGISNQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA IS LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATISQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|56752363|ref|YP_173064.1| hypothetical protein syc2354_c [Synechococcus elongatus PCC 6301]
gi|56687322|dbj|BAD80544.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 442
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 189/372 (50%), Gaps = 48/372 (12%)
Query: 90 PSRKDEPFRFTDTSMI------------KSSQIQPITRPSSSLD-VSTDAQFPS------ 130
PS K E +RFTD S++ K+ ++P+ L V D QF +
Sbjct: 56 PSTKVEDWRFTDLSLLPKRSFVAAPAQAKAEFVEPLLLADVPLRAVFVDGQFRADLSSAD 115
Query: 131 ----LVLIDGFIQNSALNLSNLPDGVYVG-SLLGVSDGIMKRVSDFISEFQCGDLFW--- 182
L L GF A NL L D ++ + G + RV+ + Q L W
Sbjct: 116 WPEGLSLTVGFDAAIAQNL--LADDLFATLNTAGFGQAAVIRVAAGAAIAQPLHLLWISS 173
Query: 183 -----------SINGMGA-PDLGVI--YVPAEGNDC---YWANSVLEVVIGKGGKVRHSY 225
++ +GA L +I + P GNDC Y+ N+V E+ +G +++HS
Sbjct: 174 STSETAFSQPRALIELGANSALTLIEDFAPL-GNDCTADYFVNAVTEIQLGANAQLKHSR 232
Query: 226 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 285
+Q A HI TAVRQE S Y + VSTG LSRHN Q G ET L L
Sbjct: 233 VQRDGDRAIHIGTTAVRQERDSRYHGIAVSTGAHLSRHNYLAAQDGSQAETILDGLSLAD 292
Query: 286 SDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLL 345
D+ D HS + + P G +QLHKCI A G+AVF G V V + AQQTDA QL+R+LL
Sbjct: 293 GDRLVDTHSGMFFNQPHGRSQQLHKCI-ASDRGRAVFSGRVVVPQIAQQTDAAQLSRNLL 351
Query: 346 LEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAE 405
L RA ++ KP L+I+ADDVKCSHGA +S L E ++FY Q+RG++ A L+ +F E
Sbjct: 352 LSSRARIDAKPQLEIVADDVKCSHGATVSQLSEDEIFYLQSRGLNQAEATHLLIEAFAGE 411
Query: 406 VIERFPYPSIRN 417
++++ P +R
Sbjct: 412 ILQKLPSAQLRE 423
>gi|81300546|ref|YP_400754.1| iron ABC transporter permease [Synechococcus elongatus PCC 7942]
gi|81169427|gb|ABB57767.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
elongatus PCC 7942]
Length = 442
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 189/372 (50%), Gaps = 48/372 (12%)
Query: 90 PSRKDEPFRFTDTSMI------------KSSQIQPITRPSSSLD-VSTDAQFPS------ 130
PS K E +RFTD S++ K+ ++P+ L V D QF +
Sbjct: 56 PSTKVEDWRFTDLSLLLKRSFVAAPAQAKAEFVEPLLLADVPLRAVFVDGQFRADLSSAD 115
Query: 131 ----LVLIDGFIQNSALNLSNLPDGVYVG-SLLGVSDGIMKRVSDFISEFQCGDLFW--- 182
L L GF A NL L D ++ + G + RV+ + Q L W
Sbjct: 116 WPEGLSLTVGFDAAIAQNL--LADDLFATLNTAGFGQAAVIRVAAGAAIAQPLHLLWISS 173
Query: 183 -----------SINGMGA-PDLGVI--YVPAEGNDC---YWANSVLEVVIGKGGKVRHSY 225
++ +GA L +I + P GNDC Y+ N+V E+ +G +++HS
Sbjct: 174 STSETAFSQPRALIELGANSALTLIEDFAPL-GNDCTADYFVNAVTEIQLGANAQLKHSR 232
Query: 226 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 285
+Q A HI TAVRQE S Y + VSTG LSRHN Q G ET L L
Sbjct: 233 VQRDGDRAIHIGTTAVRQERDSRYHGIAVSTGAHLSRHNYLAAQDGSQAETILDGLSLAD 292
Query: 286 SDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLL 345
D+ D HS + + P G +QLHKCI A G+AVF G V V + AQQTDA QL+R+LL
Sbjct: 293 GDRLVDTHSGMFFNQPHGRSQQLHKCI-ASDRGRAVFSGRVVVPQIAQQTDAAQLSRNLL 351
Query: 346 LEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAE 405
L RA ++ KP L+I+ADDVKCSHGA +S L E ++FY Q+RG++ A L+ +F E
Sbjct: 352 LSSRARIDAKPQLEIVADDVKCSHGATVSQLSEDEIFYLQSRGLNQAEATHLLIEAFAGE 411
Query: 406 VIERFPYPSIRN 417
++++ P +R
Sbjct: 412 ILQKLPSAQLRE 423
>gi|425446491|ref|ZP_18826494.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389733251|emb|CCI02948.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 441
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 198/400 (49%), Gaps = 56/400 (14%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVST--DAQFP 129
+LR+S + P RKDE ++FTD S + + Q +T ++L V +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFCAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGV---------------YVG-----------SLLGVSDG 163
LV ++G Q ++S LP GV Y+G + G+SD
Sbjct: 93 RLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDV 152
Query: 164 IMKRVSD-----------FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------- 201
+ V+ FI+ + F+ + + + G E
Sbjct: 153 AVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEYCSDL 212
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
N Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y L E++ G K
Sbjct: 213 PVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLNEINLGAK 272
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L RHN+ + Q G TET L ++ QT D HS + L+HP G QLHKCIV S
Sbjct: 273 LCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGISNQLHKCIVDGS-AH 331
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G V V + AQ T+A QL R+LL+ +A VN KP LQI AD+VKCSHGA +S LE
Sbjct: 332 AIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEAD 391
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RG+ +TAR L+ +F AE++ + P S+R ++
Sbjct: 392 DLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRL 431
>gi|113477761|ref|YP_723822.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
gi|110168809|gb|ABG53349.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
Length = 453
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 209/407 (51%), Gaps = 68/407 (16%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVST----DAQ 127
LQ++RD ++ + P++KDE +RFT+ +SM+K S P +L+++ +
Sbjct: 41 LQQVRDRAAAWVRELSIPTKKDEEWRFTNLSSMMKLSFQAPTLVDLDALNIAPFILPEVA 100
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G + + + V+VG+L + + KRV +++++ Q G ++F +N
Sbjct: 101 DSRLVFVNGVFAPQLSEVKGIENQVFVGNLGQLPEEYQKRVGNYLAQ-QPGSEEVFTCLN 159
Query: 186 GMGAPDLGVIYVP-------------------------------AEGND----------- 203
G D V+++P AE N
Sbjct: 160 TAGLTDAAVVWLPKNQVLEKPIHLLFIATETEIPILTQRRCLVVAESNSSGKIIEHCVTA 219
Query: 204 ---C--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
C Y N+V E+ + + ++ H+ +Q + A HI TA+ Q S Y
Sbjct: 220 EVICPEAPNSHPYLTNTVTEIWVEENAEIDHTRVQRDAGAAFHIGKTAIAQAKNSRYTCN 279
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
++ GG+LSRHN+ V Q+G TET L L ++Q D HS + L++P QL+KCI
Sbjct: 280 AINLGGRLSRHNLEVVQMGEGTETNLYGLAFLRNEQEIDTHSSITLNYPNSVTDQLYKCI 339
Query: 313 V---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
V AHS +F+G + V++ AQ T+A QL R+LLL V+ KP L+IIAD+V+CSH
Sbjct: 340 VDDKAHS----IFNGKIYVSQTAQLTNAAQLNRNLLLSSGGRVDTKPQLEIIADNVQCSH 395
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
GA +S L++ ++FY Q+RG+ E +R L+ +F AE++ + P PS++
Sbjct: 396 GATVSQLDDDEVFYLQSRGLSQEASRNLLIDAFAAEILNKLPLPSLQ 442
>gi|86606834|ref|YP_475597.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
gi|86555376|gb|ABD00334.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
Length = 429
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 189/398 (47%), Gaps = 47/398 (11%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST------- 124
P LR + L P+ ++E ++++D S + + + + SLD +T
Sbjct: 30 PYTTLRQQARAQLAELGIPTPREEDWKYSDLSPLLAHKFRLAAAGDPSLDAATLEPWLWP 89
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV--SDFISEFQCGDLFW 182
+A + V ++G+ +LS LP + V L +++ + +D + L
Sbjct: 90 EASYSRAVFVNGYFAPQLSDLSGLPTALQVIPLAQAPGELLQTLAKTDVFTALNTAHLGD 149
Query: 183 SIN-----GMGAPD---LGVIYVPAEGNDCY----------------------------- 205
I G P L I V EG
Sbjct: 150 GIQIGLQPGQEVPSPLHLLFITVAPEGEAVLAQPRCLLSLQAHSSLTLIEDHVSLGSGIP 209
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
++N+V E+ + +G ++ H LQ Q A HI TAVRQ S Y L + G + SRHN+
Sbjct: 210 FSNAVTEIALAEGSRLHHVILQRQGSPAFHINKTAVRQSCDSHYRLQAIQWGSQFSRHNL 269
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ Q G T+L LL Q D HSRLL P G RQLHKCIV + +AVF G
Sbjct: 270 EITQAGAQAHTQLQGLTLLKGSQHSDTHSRLLHQAPHGSSRQLHKCIVDEA-ARAVFSGR 328
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V++ AQ TDA Q R+LLL P+A V+ +P L+I AD+VKC+HGA +S LE ++FY Q
Sbjct: 329 ILVSQAAQLTDAAQTNRNLLLSPKARVDTRPQLEIFADNVKCAHGATVSQLEAEEIFYLQ 388
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+RGI AR+ L ++F AE++E P + +QV +
Sbjct: 389 SRGIPQAQARQLLTYAFAAEILEGIPLAQLPSQVAKRL 426
>gi|428776745|ref|YP_007168532.1| iron-regulated ABC transporter permease SufD [Halothece sp. PCC
7418]
gi|428691024|gb|AFZ44318.1| Iron-regulated ABC transporter permease protein SufD [Halothece sp.
PCC 7418]
Length = 450
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 201/407 (49%), Gaps = 55/407 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
LQK + ++ + + +P RKDE +RFTD S + + SQ + S+S +A
Sbjct: 41 LQKRQQEAANWVAESRFPHRKDEEWRFTDLSPLLDHPFQGSQAVAVNPESASQFFIPEAS 100
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSING 186
LV ++G L LP GV + SL + +V+D++++ + G+ LF ++N
Sbjct: 101 SARLVFVNGRFSPELSQLDQLPSGVTLTSLGNLDVHQQSQVTDYLTQQEGGEELFTALNT 160
Query: 187 MGAPDLGVIYVPAE--------------GNDC---------------------------- 204
G D G+++V A GND
Sbjct: 161 AGFEDSGIVWVAANTEVETPIQVLFLAVGNDTSQFMQPRLLVVADTSAKVNLIEQYASLS 220
Query: 205 ------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
Y N V E+ + +V H LQ+++ N+ HI TAV Q S Y +S GG
Sbjct: 221 SENAAPYLCNPVSEIWLAGNAEVNHIRLQDEAFNSFHIAKTAVTQAQDSRYAGYPISLGG 280
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
++SRH+ V Q G T+L L Q D HS + HP QLHKCI+ S
Sbjct: 281 QISRHDFDVFQTGTQVHTKLHGLTLGNGQQLLDTHSAIAFRHPHSSADQLHKCILDDS-A 339
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ VF+G + V + AQQTDA QL R+LLL +A V+ KP L I+AD+VKCSHGA +S LE
Sbjct: 340 RGVFNGKMFVPQAAQQTDAAQLNRNLLLSEKAHVDTKPELNIVADNVKCSHGATVSQLEA 399
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
+LFY ++RG+D A L+ +F AE+IE S+R+Q+ S ++N
Sbjct: 400 DELFYLRSRGLDSNAATNLLINAFAAEIIEEITVSSLRDQLFSRLQN 446
>gi|282897159|ref|ZP_06305161.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
gi|281197811|gb|EFA72705.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
Length = 460
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 217/449 (48%), Gaps = 77/449 (17%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F+ +L L PS +P L+++R ++++ + + P+ +DE +RFTD S +
Sbjct: 20 DAFLTRLLNQLNGICPSK-----EPSWLEQVRTNATKWVRHSVIPTTRDEEWRFTDLSPL 74
Query: 106 KSSQIQPITRPSSSLDVSTDAQFPSL---------VLIDGFIQNSALNLSNLPDGVYVGS 156
+ + SS ++ ++ L V I+G + + S+LP G++VG+
Sbjct: 75 REINFALGSNLGSS-QIAMESLMEGLALPEATHRLVFINGVLTPTLSQTSDLPSGLHVGN 133
Query: 157 LLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIY------------------- 196
L + D + ++ ++++F D+F +N G D+ V++
Sbjct: 134 LDSLEDSVAQK---YLAQFDGTRDVFSDLNTAGLSDVAVLWAGKNVVVEDSIHLLFISLV 190
Query: 197 ------------VPAEGN--------------------------DCYWANSVLEVVIGKG 218
V AEGN + + NSV E+ + +
Sbjct: 191 GEFPTFCQPRCLVIAEGNSQISLVEEYIILNTPSLQNNPMGAGLNTGFNNSVTEIWVHEN 250
Query: 219 GKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETEL 278
+V HS + ++ I TAV Q S Y ++ G K+SRHN+ + Q G TET L
Sbjct: 251 AQVNHSRIVLGGDHSFDIGKTAVTQARHSRYSCNAITIGSKISRHNLELIQTGEQTETNL 310
Query: 279 SSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAG 338
+ ++ Q D HS + L++P +QLHK I+ VF+G + V + AQ TDA
Sbjct: 311 YALTVIAQKQLGDTHSAIALNYPYATSKQLHKLIIGDR-AHGVFNGKIFVPKSAQLTDAS 369
Query: 339 QLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKAL 398
QL R+LLL +A V+ KP L+I AD+VKC+HGA +S LE+ Q+FY Q+RGI ARK L
Sbjct: 370 QLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDQIFYLQSRGIGETEARKLL 429
Query: 399 VFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
V +F EVI P S+R +++ V +L+
Sbjct: 430 VNAFATEVINLIPLASLREKLLKTVSSLV 458
>gi|434395013|ref|YP_007129960.1| Iron-regulated ABC transporter permease protein SufD [Gloeocapsa
sp. PCC 7428]
gi|428266854|gb|AFZ32800.1| Iron-regulated ABC transporter permease protein SufD [Gloeocapsa
sp. PCC 7428]
Length = 468
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 134/216 (62%), Gaps = 1/216 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y+ N+V E+ + + +V H+ ++ S A HI TA+ Q S Y ++ G KL
Sbjct: 245 GEPIYFTNAVTEIWLEENAQVNHTRIERDSPEAFHIGKTAIAQARDSRYTCNAINLGAKL 304
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
SRHN+ + Q G T+T L+ + +Q D HS L L+HP G QLHKCIV A
Sbjct: 305 SRHNLDIFQTGEQTQTTLNGLTKIAGNQVADTHSNLALNHPYGTSHQLHKCIVGDR-AHA 363
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+G + V + AQQTDA QL R+LLL P+A V+ KP L+I AD+VKC+HGA +S L++ +
Sbjct: 364 VFNGKIFVPKPAQQTDAAQLNRNLLLSPKARVDTKPQLEITADNVKCAHGATVSQLDDEE 423
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+FY Q+RG++ AR L+ +F AE+I + P S++
Sbjct: 424 VFYLQSRGLNANEARNLLINAFAAEIINQIPVSSLQ 459
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ--PITRP---SSSLDVSTDAQ 127
L+ +RD ++ + + +P+ +DE +RFTD S +K + Q P+ P + + +A
Sbjct: 54 LEAIRDRATAIVHQSKFPTTRDEEWRFTDVSPLKQVKFQAAPLVVPDLAALKPLLLPEAD 113
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++G I L+ L DGV +L + R+ +++++ ++F ++N
Sbjct: 114 RSRLVFVNG-IYAPELSAVVLSDGVVASNLDRLPPAYRSRLENYLAQIPGTEEVFTALNT 172
Query: 187 MGAPDLGVIYVP 198
D+ V+++P
Sbjct: 173 AAIADVAVVWIP 184
>gi|86608871|ref|YP_477633.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557413|gb|ABD02370.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 430
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 180/386 (46%), Gaps = 47/386 (12%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST------- 124
P LR + L P+ ++E ++++D S + + + + SLD +T
Sbjct: 30 PYTTLRQQARAQLAELGIPTPREEDWKYSDLSPLLAHKFRLAAAGDPSLDAATLEPWLWP 89
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV--SDFISEFQCGDLFW 182
+ + V ++G+ +LS LP + V L +++ + +D + L
Sbjct: 90 ETSYSRAVFVNGYFAPQLSDLSGLPTALQVIPLAQAPGELLQTLAKTDVFTALNTAHLGD 149
Query: 183 SIN-----GMGAPD---LGVIYVPAEGNDCY----------------------------- 205
I G P L I V EG
Sbjct: 150 GIQIGLQPGQEVPSPLHLLFITVAPEGEAVLAQPRCLLSLQAHSSLTLIEDHVSLGSGIP 209
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N+V E+ + +G ++ H LQ Q A HI TAVRQ S Y L + G + SRHN+
Sbjct: 210 FGNAVTEIALAEGSRLHHVILQRQGSPAFHINQTAVRQSRNSHYRLQSIQWGSQFSRHNL 269
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ Q G T+L LL Q D HSRL+ P G RQLHKCIV + AVF G
Sbjct: 270 EITQAGAQAHTQLQGLTLLKGSQHSDTHSRLVHQAPHGSSRQLHKCIVDET-AHAVFSGR 328
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V+R AQ TDA Q R+LLL P+A V+ +P L+I AD+VKC+HGA +S LE ++FY Q
Sbjct: 329 ILVSREAQLTDAAQTNRNLLLGPKARVDTQPQLEIFADNVKCAHGATVSQLEAEEIFYLQ 388
Query: 386 ARGIDLETARKALVFSFGAEVIERFP 411
+RGI AR+ L +F AEV+E P
Sbjct: 389 SRGIPQADARQLLTCAFAAEVLEGIP 414
>gi|282900437|ref|ZP_06308387.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
gi|281194750|gb|EFA69697.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
Length = 461
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 219/449 (48%), Gaps = 76/449 (16%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F+ +L L + S +P L+++R ++++ + + P+ +DE +RFTD S +
Sbjct: 20 DAFLTRLLNQLNEICLSK-----EPSWLEQVRTNATKWVRHSVIPTTRDEEWRFTDLSPL 74
Query: 106 KSSQIQPITRPSSS---LDVSTDAQ---FPS----LVLIDGFIQNSALNLSNLPDGVYVG 155
+ + SS ++ D + P LV I+G + + S+LP G++VG
Sbjct: 75 REISFALGSNLGSSQIAMESFMDMEGLGLPEATHRLVFINGVLTPTLSQTSDLPSGLHVG 134
Query: 156 SLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIY------------------ 196
+L + D + ++ ++++F D+F +N G D+ V++
Sbjct: 135 NLNSLEDSVAQK---YLAQFDGTRDVFSDLNTAGLSDVAVVWARKNVVVEDPIQLLFISL 191
Query: 197 -------------VPAEGN-------------------------DCYWANSVLEVVIGKG 218
V AEGN + + NSV E+ + +
Sbjct: 192 VGEFPTFCQPRCLVIAEGNSQISLIEEHITLNTPSPQNNPSPGLNSGFNNSVTEIWVHEN 251
Query: 219 GKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETEL 278
++ HS + ++ I TAV Q S Y ++ GGK+SRHN+ + Q G TET L
Sbjct: 252 AQINHSRIVLGGDHSFDIGKTAVTQARYSRYSCNAITIGGKISRHNLELVQTGEQTETNL 311
Query: 279 SSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAG 338
+ ++ Q D HS + L++P +QLHK I+ VF+G + V + AQ TDA
Sbjct: 312 NGLTVIAQKQLGDTHSAIALNYPYATSKQLHKLIIGDR-AHGVFNGKIFVPKSAQLTDAS 370
Query: 339 QLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKAL 398
QL R+LLL +A V+ KP L+I AD+VKC+HGA +S L++ ++FY Q+RGI ARK L
Sbjct: 371 QLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLQDDEIFYLQSRGIGETEARKLL 430
Query: 399 VFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
V +F EVI P S+R +++ V +L+
Sbjct: 431 VNAFATEVINLIPLASLREKLLKTVSSLV 459
>gi|254422828|ref|ZP_05036546.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
gi|196190317|gb|EDX85281.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
Length = 462
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 198/419 (47%), Gaps = 76/419 (18%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD---- 125
PL L+ LRD + + +PS KDE +RFTD S + QP R + D
Sbjct: 36 PLGLKALRDQAIALVNERSFPSGKDEEWRFTDLSKMLD---QPFQRSQPVYSQADDWNAH 92
Query: 126 ----AQFPSLVLIDGFIQNS-ALNLSNLPDGVYVG---SLLGVSDGIMKR---VSDFISE 174
+ L I+G +S + + D VG LL SD K + D +++
Sbjct: 93 LKLLSDGTCLTTINGHYDSSLSREVDQSTDKAIVGPLSELLKNSDYAEKLGPILKDKLAQ 152
Query: 175 FQCG-DLFWSINGMGAPDLGVIYV------------------------------------ 197
+ G ++F ++N +G D+ V++V
Sbjct: 153 IKGGSEVFTALNTVGFADVMVVWVQADQVVDAPIYIARGSQGGFISHVRSLVIAERHAKF 212
Query: 198 --------PAEGNDCYWA------------NSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 237
PAE + + NSV E+ + +G +V H +Q++S N H+
Sbjct: 213 TLVESFFGPAEATNAQCSVGQDEPTETCCNNSVTEIWLAEGAQVNHIRVQDESANTFHLA 272
Query: 238 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 297
TAV Q S Y+ V G KLSRH+V V Q G T+T+L L Q D HS L
Sbjct: 273 KTAVDQAANSQYQCTAVDLGAKLSRHHVEVYQSGAQTDTKLYGLSALGDRQLADTHSLLA 332
Query: 298 LDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPN 357
L +P G Q+ K IV VF+G V V++ AQ TDA QL R+L+L +A V+ KP
Sbjct: 333 LTYPYGSATQIQKNIV-DDQSHCVFNGKVYVSKEAQLTDASQLNRNLMLSTKARVDTKPE 391
Query: 358 LQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
L IIAD+VKC+HGA +S L+ ++FY Q+RGI E A++ L++ FG E++E+ PS++
Sbjct: 392 LDIIADNVKCAHGATVSQLQSDEVFYLQSRGISAEQAQRLLLYGFGMEIVEKVSVPSLK 450
>gi|427712068|ref|YP_007060692.1| iron-regulated ABC transporter permease SufD [Synechococcus sp. PCC
6312]
gi|427376197|gb|AFY60149.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. PCC 6312]
Length = 448
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 196/406 (48%), Gaps = 53/406 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD---AQFP 129
L +LR +++ L P+ + E +RFTD S+I + P P + T +
Sbjct: 45 LGQLRQTAADALHEQFIPTTRQEEWRFTDLSLITQAPFSPPAHPPDLATLPTQRIAEKHL 104
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVG----------SLLGVSDGIMKRVSDFISEFQCGD 179
+VL++G ++ N GV VG +LLG G + V ++ C D
Sbjct: 105 RMVLVNGVYAPDLSDVGNSHAGVMVGNLAQARPETLALLGQLPG-REEVFTALNTASCRD 163
Query: 180 LFWSINGMG--------------APDLGVI-------------------YVPAEGNDCYW 206
+ G AP +I Y+ E D
Sbjct: 164 VLTIEVGAKVCPGFVIHLVFLTTAPQATLISPRVLVVLQPGSSLTLVEDYISGE-MDTAL 222
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
N+V E+ +G ++ H+ +Q Q+ A HI T + Q S Y ++ GG+LSRHN
Sbjct: 223 TNAVTEIYLGNQAELDHTRIQRQAPTALHIGKTVISQAQHSQYSGHAITWGGQLSRHNWD 282
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 326
V GP+T T L + ++Q D HS L+ P +Q++K IV +AVF+G +
Sbjct: 283 VNSNGPETTTILEGLTVATANQLADTHSSLIFSAPHCSSQQVNKYIVG-GRARAVFNGKI 341
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
V + AQ TDA QL+R+LLL P+A ++ KP L+I+AD+VKCSHGA +S L E +FY Q+
Sbjct: 342 VVPQAAQMTDASQLSRNLLLSPKARIDTKPQLEIVADNVKCSHGATVSQLAEDDVFYLQS 401
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQ----VVSHVKNLMG 428
RG+DL+ AR L+ +F E+++ F PS+ + ++SH+ G
Sbjct: 402 RGLDLQQARDLLIRAFAVELLDGFQIPSLAKELAQNILSHIHQANG 447
>gi|89900648|ref|YP_523119.1| FeS assembly protein SufD [Rhodoferax ferrireducens T118]
gi|89345385|gb|ABD69588.1| Iron-regulated ABC transporter permease protein SufD [Rhodoferax
ferrireducens T118]
Length = 442
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 194/422 (45%), Gaps = 62/422 (14%)
Query: 54 ESLEDSLPSSSSSL--PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+ L SL ++ SL QP L LR + + + + PS DE +RFT +
Sbjct: 15 DGLLASLTQTAGSLVSTQPKWLTTLRAQALERVGALTLPSTHDEAWRFTPLATFARQSFH 74
Query: 112 PITRPSSSL-----DVSTDAQFPSLVLIDGFIQNSALNLSNL-PD-GVYVGSLLGVSDGI 164
P+ P++ L + + LV +DG A LS+L PD G+ VG+L +
Sbjct: 75 PLRTPTALLPGDIKHLHIEEVTTRLVFVDGV---HAPQLSSLKPDAGLAVGTLASMLARQ 131
Query: 165 MKRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAEGN-------------------- 202
+ + + LF ++N D V+ VP E
Sbjct: 132 ASSIEPHLGQHLAFHDALFAALNTAFLQDAAVLVVPRETTLAAPVHVLYISTQPDVASHP 191
Query: 203 -----------------------DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 239
Y+ N+V EV +G +V H +Q +S A H+
Sbjct: 192 RLLLVAGAGSKATLIEDYVALHPGTYFTNAVAEVALGANAQVSHVRIQRESQQAFHMASC 251
Query: 240 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 299
AV AS Y ++ GG++SR ++ V Q E L L+ Q D H+ +D
Sbjct: 252 AVSLGAASRYHSASITLGGQISRLDLKVLQSADAAECALDGLALIGGQQLADTHT--FID 309
Query: 300 H--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPN 357
H P G RQLHKCIV + AVF+G V V AQ+TD+ Q +R+LLL +A V+ +P
Sbjct: 310 HAKPHGVSRQLHKCIVGGA-AHAVFNGQVMVRPGAQKTDSAQSSRNLLLSGKAQVDTQPQ 368
Query: 358 LQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
L+I ADDVKC+HGA + L+ ++FY Q+RG+ AR L ++FGAEVI R P S+R
Sbjct: 369 LEIFADDVKCTHGATVGQLDSDEVFYLQSRGLSEAVARNLLTYAFGAEVINRIPVASLRR 428
Query: 418 QV 419
Q+
Sbjct: 429 QL 430
>gi|427417545|ref|ZP_18907728.1| Iron-regulated ABC transporter permease protein SufD [Leptolyngbya
sp. PCC 7375]
gi|425760258|gb|EKV01111.1| Iron-regulated ABC transporter permease protein SufD [Leptolyngbya
sp. PCC 7375]
Length = 426
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 198/423 (46%), Gaps = 64/423 (15%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQI 110
L E LE + S+ S PL L LR ++ + +PS +DE +RFTD +SM++ S
Sbjct: 14 LGELLEQAALSAKQS---PLGLDALRAAARALVQERTFPSNRDEDWRFTDLSSMLEMSFQ 70
Query: 111 QP-------ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
P I L + LV ++G +S LSN+ DG V S
Sbjct: 71 APGALKDAVIAEAKQQLANISLGDTARLVFVNGIFADS---LSNISDGTSVLSQ------ 121
Query: 164 IMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVPA----------------------- 199
+ D +++ Q ++F ++N G D V+++
Sbjct: 122 -AEATPDALAQIQGSNEVFTALNTAGFTDAAVLHIKKNTAIEQPIQIVYLTIGHGLFVQP 180
Query: 200 ------------------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 241
G+ + NSV EV + +V H LQ +S A HI TAV
Sbjct: 181 RCLVVAEAGSAVTLVEEFHGSGASFTNSVSEVWVHDNAEVTHLRLQQESSEAVHIGKTAV 240
Query: 242 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 301
Q S Y G +SRHN+ V Q GP TET+L+ + Q D HS + L+HP
Sbjct: 241 SQARDSRYRNTAFIFGAGISRHNLEVYQTGPQTETKLTGLTAVRGRQLADTHSLIALNHP 300
Query: 302 RGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 361
G QL K I+ VF+G V V AQ T+A QL R+LLL +A V+ KP L I+
Sbjct: 301 HGTANQLQKNIM-DDRSHGVFNGRVYVPHQAQLTNASQLNRNLLLSSKARVDTKPELDIV 359
Query: 362 ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
AD+VKC+HGA +S L ++FY Q+RGI+ + A++ LV++F E+IE +R ++
Sbjct: 360 ADNVKCAHGATVSQLAPDEMFYLQSRGINRDQAQRLLVYAFAMEIIEPITVAPLRERMNQ 419
Query: 422 HVK 424
+++
Sbjct: 420 YIQ 422
>gi|284929291|ref|YP_003421813.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
gi|284809735|gb|ADB95432.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
Length = 443
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 196/410 (47%), Gaps = 60/410 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-----PITRPSSSLDVSTDAQ 127
Q L+ S Q + +P+ K+E +RF + + + Q + IT+ S V ++A
Sbjct: 30 FQSLKQDSLQKIKELSFPTSKEEEWRFMNLAELYKYQFKIAKATKITKESIKDLVVSEAN 89
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSING 186
+V +DG + +++ D +++G+L V D + ++ Q D+F +N
Sbjct: 90 SNCIVFVDGQYDRALSDIALSSDDIFIGTLQDVPDIKKNEIYTLLNSDQNKKDIFSRLNT 149
Query: 187 MGAPDLGVIYV--------------------------------PAEGNDC---------- 204
+G D +I V +G+D
Sbjct: 150 IGLVDPAIIIVNENITIKDPIQLLFIATKQKNSLLIQPRTLVVAEKGSDLSIVEYYSTVE 209
Query: 205 -----------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
Y+ NSV E+ + +V HS +Q +S + HI + + Q S Y L +
Sbjct: 210 NPYLELDQIVPYFTNSVTEIFLKDNSRVIHSRIQLESNISFHISKSNITQNQDSFYVLNQ 269
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
G K+SR+N+ + Q G TE+ L+ LL +DQ + + L++P G QLHK ++
Sbjct: 270 FDLGSKVSRNNIEIFQNGARTESYLNGLSLLGNDQISCTKTSINLNYPNGIIDQLHKYVI 329
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+FDG + V++ AQ T A QL R+LLL + +N KP LQIIAD+VKCSHGA I
Sbjct: 330 DDK-AHGIFDGKIIVSKLAQITKAKQLNRNLLLSKNSHINTKPELQIIADNVKCSHGATI 388
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+ LE ++LFY Q+RG+ AR LV +F E++ + P+ S+ +++ ++
Sbjct: 389 TQLEANELFYLQSRGLSELEARHLLVDAFMREILMKIPHKSLEQKLIKYI 438
>gi|325982997|ref|YP_004295399.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
gi|325532516|gb|ADZ27237.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
Length = 435
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 202/421 (47%), Gaps = 61/421 (14%)
Query: 60 LPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS 118
L S S+ +PL L +LR + + + P+++DE +RFTD S + Q +P +
Sbjct: 14 LKSWSTKSNEPLSWLNQLRARAIDHVSTQRLPTKRDEEWRFTDISALTRLSFQS-AQPHT 72
Query: 119 SLDVSTDAQF------PSLVLIDGF--------IQNSALNLSNLPDGV---------YVG 155
+L SLV +DG+ + ++ L + NL + + G
Sbjct: 73 NLQTQDIEHLYLKEAKSSLVFVDGYYSPQLSTHVDSAVLQIGNLSTFLLTQPSVLESHFG 132
Query: 156 SLLGVSDGIMKRV-SDFISEFQCGDLFWSINGMGAPDLGVIYVPAE-------------- 200
+ + + + F+ + C + N + A + ++++ +
Sbjct: 133 QYAKFDNNVFAALNTAFLRD--CALIIAPKNTVIAEPIHLLFIATQSEVTCYPRCLIIGE 190
Query: 201 -GND-------------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
G+D Y NSV E+ + +H +Q +S A H+ AV
Sbjct: 191 PGSDVTFVEDYVSLRETAYVTNSVTEISLSANAHAKHIRIQRESAQAYHLANCAVSLAHG 250
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGY 304
S Y+ V +S G ++SR+N++VQ + + L+ +Q D H+ +DH P G
Sbjct: 251 SNYQSVSISLGAQISRYNLNVQLGDEAAQCTIDGLALISDNQLADTHT--CIDHIKPNGI 308
Query: 305 CRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
RQ HKCIV + AVF+G + V +AQQT++ Q +R+LLL A ++ KP L+I ADD
Sbjct: 309 SRQQHKCIV-NDKAHAVFNGKIIVRPHAQQTNSSQSSRNLLLSKTAQIDTKPQLEIFADD 367
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
VKC+HGA + L++ ++FY Q+RG+ TAR L ++FGAE+I+R P S+R Q+ V
Sbjct: 368 VKCAHGATVGQLDQEEIFYLQSRGLSEATARSLLTYAFGAEIIDRIPVNSLRQQLEQTVL 427
Query: 425 N 425
N
Sbjct: 428 N 428
>gi|339483424|ref|YP_004695210.1| FeS assembly protein SufD [Nitrosomonas sp. Is79A3]
gi|338805569|gb|AEJ01811.1| FeS assembly protein SufD [Nitrosomonas sp. Is79A3]
Length = 436
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 193/415 (46%), Gaps = 73/415 (17%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
L +LR + + + P+R+DE +RFTD S + QP ++P +L F
Sbjct: 28 LNQLRTQAIDRVGTQKLPTRRDEEWRFTDISPLVHLPYQP-SQPECNLLAHDIEHFYLKE 86
Query: 129 --PSLVLIDGF-----------IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
LV +DG + +AL + NLP +V + V + + F +
Sbjct: 87 AKHRLVFVDGHYSPNLSTIIDPVDPAALVIGNLP--AFVATHASVLESHLGHYVHFDN-- 142
Query: 176 QCGDLFWSINGMGAPDLGVIYVP--------------AEGNDC----------------- 204
+LF ++N D +I VP A N+
Sbjct: 143 ---NLFAALNTAFLRDGALIIVPKNIAIAEPIHLLFIATQNEVTSYPRCLLIGEAGSNVT 199
Query: 205 ------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
Y NSV E+ + + +H +Q +S A H+ AV AS Y+
Sbjct: 200 LIEDYVALQQATYITNSVTEISLAANAQAKHIRIQRESTQAFHLANCAVSLAHASNYQST 259
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHK 310
+S G ++SR+N++V+ E + L+ Q D H+ +DH P G RQ HK
Sbjct: 260 SISLGSQISRYNLNVRLTDAAAECVVDGLTLISDHQLADTHT--CIDHVKPNGTSRQHHK 317
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
CIV + AVF+G + V+ +AQQT++ Q +R+LLL A V+ KP L+I ADDVKC+HG
Sbjct: 318 CIVDDA-AHAVFNGKIIVHPHAQQTNSSQSSRNLLLSKMAQVDTKPQLEIFADDVKCAHG 376
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
A + L+ ++FY ++RG+ + AR L ++FGAE+I R P S+R Q+ V N
Sbjct: 377 ATVGQLDLEEIFYLESRGLSEKAARNLLTYAFGAEIISRIPVTSLRQQLEQAVLN 431
>gi|387129251|ref|YP_006292141.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM7]
gi|386270540|gb|AFJ01454.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM7]
Length = 430
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 199/428 (46%), Gaps = 60/428 (14%)
Query: 51 QLAESLEDSLPSSS----SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK 106
QL E D +P + + LP P + LR S Q P ++DE +++T
Sbjct: 3 QLTEFQTDFIPVAEMRRENGLPNP-DWRGLRASGQQYFERNGLPGKRDEDWKYTSLWSFS 61
Query: 107 SSQI-----QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
Q QP ++ + +DA LV++DG I +A +LS LPDGV V L
Sbjct: 62 QQQFTHDVSQPGHVNAADWQLLSDAY--QLVIVDGHIDFTASSLSGLPDGVTVQPLSQSL 119
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA--------------EGNDCYWA 207
D M ++ IS + G F ++N M + I+V A GN A
Sbjct: 120 DAAMPYLNQQISLEKSG--FNALNTMLMSEGAYIHVAAGVKLKKPIELLVVNSGNTADLA 177
Query: 208 -------------------------------NSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
NS+ E+ + K+ H LQ +S HI
Sbjct: 178 VHLRHVVVMEAESEATLIELYASPDDTTGLTNSITEIDLADRAKLFHYKLQRESKQQFHI 237
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
A +Q +S + +S GG+L+R++VH Q LG ++ +L+ Q D H+R+
Sbjct: 238 ATMAAKQAQSSEWHNHNISLGGQLARNDVHSQLLGEQAHVTMNGLYLVDGRQHVDNHTRI 297
Query: 297 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
P +L+K ++ AVF+G V V+R AQ+TDA Q ++LLL A ++ KP
Sbjct: 298 DHTIPNTTSDELYKGVMDDK-SHAVFNGKVHVHRDAQKTDANQANKNLLLSRGAEIDSKP 356
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
++I ADDVKC HG+AI + E QLF+ +ARG+ +AR L F+F A+VIE+ IR
Sbjct: 357 EMEIYADDVKCGHGSAIGQINEDQLFFLRARGLSETSARSLLTFAFAADVIEQIDNTDIR 416
Query: 417 NQVVSHVK 424
+ ++ V+
Sbjct: 417 DAIIRVVE 424
>gi|373488168|ref|ZP_09578833.1| Iron-regulated ABC transporter permease protein SufD [Holophaga
foetida DSM 6591]
gi|372006493|gb|EHP07125.1| Iron-regulated ABC transporter permease protein SufD [Holophaga
foetida DSM 6591]
Length = 422
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 193/408 (47%), Gaps = 50/408 (12%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS 117
D LP +++ +P + LR + L +P+ K E +++TD + +K+ +P
Sbjct: 6 DFLPEVAAA-SRPKEWETLRAKAETHLDGKSYPAPKAEDWKYTDLAPLKTLAPKPGIHAC 64
Query: 118 SSL--DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL------------LGVSDG 163
+ + +++ LV ++G N S LP GV + L L +
Sbjct: 65 VDIRGHILPESRGARLVFVNGHYDPHYSNASGLPPGVRMLQLASASEAASALGTLATPET 124
Query: 164 IMKRVSDFISEFQCGDLFWSING-----------MGAPD-----------LGVIYVPAE- 200
+ ++F G + G MGAPD L V+ AE
Sbjct: 125 CDVFANLNTAKFADGAFIYVPKGLQVEPVLHVCFMGAPDGDQATCAHPRLLVVLEKGAEL 184
Query: 201 -------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
G Y+ N++ EV++ G ++RH +Q +S A H+ + ++ Y
Sbjct: 185 HLVEEYSGQGSYFTNALTEVIVKDGAELRHERIQLESPEAIHLCHLRAQVGRSARYFSRT 244
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKC 311
+S G +LSR + HV + L LL Q D HS ++DH + C RQLHK
Sbjct: 245 ISFGARLSRQSPHVVLADEGAKVHLDGLALLDGQQVADTHS--IIDHTQANCSSRQLHKA 302
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
I + VF+G + V AQQTDA Q +R+LLL +A V+ KP LQI+ADDVKC+HGA
Sbjct: 303 I-GDGQSRIVFNGKIFVRPGAQQTDAQQQSRNLLLSEKAQVDTKPELQILADDVKCAHGA 361
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
AI L+ +LFY Q+RG+DL A+ L + F A+++ R P PS+R +
Sbjct: 362 AIGQLDPEELFYLQSRGLDLNAAKNLLTYGFAADLLSRIPVPSLRKHL 409
>gi|22299448|ref|NP_682695.1| hypothetical protein tlr1905 [Thermosynechococcus elongatus BP-1]
gi|22295631|dbj|BAC09457.1| tlr1905 [Thermosynechococcus elongatus BP-1]
Length = 432
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 186/384 (48%), Gaps = 39/384 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS------TDA 126
L LR ++ L P+ +DE +RFTD S++++ QP P + V+ +
Sbjct: 38 LAVLRQTARDRLHEQTLPTPRDEDWRFTDLSVLRTRTFQPPIAPLNPEIVAEVQHLLCER 97
Query: 127 QFPS---LVLIDGFI-----QNSALNLSNLPDGV------YVGSLLG---VSDGIMKRVS 169
FP+ +VLIDG+ + A + LP + V S L +++ + R+S
Sbjct: 98 SFPTVAQIVLIDGYFCGELSRVDAAGVELLPPSLPAIAPPEVFSDLNAAMLAERLCLRLS 157
Query: 170 D---------FISEFQ-----CGDLFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVI 215
F+S Q L + G L ++ G D + N+V E+ +
Sbjct: 158 GHFREPVEVFFVSSRQQQSVVSPRLTVEVAAHGQVTLIERFLSLTG-DQQFTNTVTEISL 216
Query: 216 GKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTE 275
G + H +Q+QS A HI TAV Q S YE + GG LSRH+ VQ G ++
Sbjct: 217 GAAAGLHHVRIQHQSPTAIHIGSTAVCQAQDSAYEGHAIDLGGCLSRHHWQVQIQGSGSQ 276
Query: 276 TELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQT 335
T L + + +Q D HS +L P Q+HKCI+ +F+G V V + AQ T
Sbjct: 277 TILKGLAIAMDEQIVDTHSAVLFHAPHSRSEQIHKCILGDR-AHGIFNGRVVVPQVAQLT 335
Query: 336 DAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETAR 395
DA QL R+LLL +A V+ KP L+I+AD+VKCSHGA +S L +FY ++RG+D AR
Sbjct: 336 DASQLNRTLLLSDKARVDTKPQLEIVADNVKCSHGATVSQLAAEDIFYLRSRGLDQHQAR 395
Query: 396 KALVFSFGAEVIERFPYPSIRNQV 419
LV +F E + +R ++
Sbjct: 396 DLLVKAFALEQLSDITPEPLREEI 419
>gi|82701831|ref|YP_411397.1| FeS assembly protein SufD [Nitrosospira multiformis ATCC 25196]
gi|82409896|gb|ABB74005.1| Iron-regulated ABC transporter permease protein SufD [Nitrosospira
multiformis ATCC 25196]
Length = 440
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 185/412 (44%), Gaps = 74/412 (17%)
Query: 68 PQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
P PL +LR ++ P+ +DE +RFTD S + QP R + +L +
Sbjct: 24 PSPLAWFNQLRANAVDHAGRLKLPTTRDEEWRFTDLSPLVRHSFQP-ARAAPALQTADVE 82
Query: 127 QFP------SLVLIDG-----------FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
F LV +DG + N L ++NL + + + I +
Sbjct: 83 HFSLTEAAIRLVFVDGKYMPQLSTPAERLGNRGLIVTNLSSAITANA-----EAIEPHLG 137
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVP-----------------------------AE 200
+ + F+ G+LF ++N D ++ VP AE
Sbjct: 138 QY-ARFE-GNLFAALNTAFLHDGALVIVPRGAVIDTPVHVLLVTTQPEVASHPRCLFIAE 195
Query: 201 GND--------------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
Y N+V E+ +G ++ H +Q S A HI AV A
Sbjct: 196 AGSEVTILEDYVSLNEAIYVTNAVTEIAVGDNAQISHIRVQRDSTEAFHIGNCAVSLAHA 255
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC- 305
S Y V V+ G ++SR++++ E + L+ Q D HS + DH R C
Sbjct: 256 SRYRSVSVALGARISRYDLNTALAAEGAECVIDGLALINGRQLADTHSSI--DHARPNCT 313
Query: 306 -RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
RQLHKCI A AVF+G + V AQ TD+ Q +R+LLL +A ++ KP L+I ADD
Sbjct: 314 SRQLHKCI-ADGSAHAVFNGKIMVRPGAQNTDSAQSSRNLLLNAKARIDTKPQLEIFADD 372
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
VKC+HGA + L+ +LFY ++RG+ AR L ++FGAE+I+R P S++
Sbjct: 373 VKCAHGATVGQLDSEELFYLKSRGLSEVAARNLLTYAFGAEIIDRIPIASLK 424
>gi|30249419|ref|NP_841489.1| hypothetical protein NE1448 [Nitrosomonas europaea ATCC 19718]
gi|30138782|emb|CAD85359.1| Uncharacterized protein family UPF0051 [Nitrosomonas europaea ATCC
19718]
Length = 435
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 197/430 (45%), Gaps = 72/430 (16%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
E L +S +S + L +LR+ + + S P+ +DE +RFTD S ++S P
Sbjct: 11 EKLIESWKKEASPVHSVSYLDQLREDALDRIESLRLPTIRDEEWRFTDISSLRS---MPF 67
Query: 114 TRPSSS----LDVST----DAQFPSLVLIDGFIQNSALNLSNLPDG-----VYVGSLLGV 160
R S++ LD D LV +DG + LS+L D + L+G
Sbjct: 68 PRASAAPLPGLDKQAGTFLDETACRLVFVDGQYMS---GLSSLADDGSITVCSLSELIGT 124
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA--------------------- 199
I +R +++FQ ++F ++N D I +PA
Sbjct: 125 RASIAERYFGQLADFQ-ENVFVALNTALMHDGVCIVIPAGVSVKVPVHILYVTSRKDVAV 183
Query: 200 ------------------------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 235
EG N+V E+ I V H +Q +S A H
Sbjct: 184 YPRCLLIAEPGANVTVVEEYVTLYEGAS--LTNAVTEMYIRDSACVNHIRVQRESSQAFH 241
Query: 236 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 295
I +V ++ Y+ V ++ G ++SR + + G + E E+ L+ Q D H+
Sbjct: 242 IANGSVLVAQSAHYDSVSLALGARISRFDQKIILAGGNAECEVDGLALIAGRQLADTHT- 300
Query: 296 LLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
+DH +CR QLHKCIV S VF G + V +AQQTDA QL R+LLL +A ++
Sbjct: 301 -FIDHANPHCRSRQLHKCIVDES-AHGVFSGKIMVRPHAQQTDARQLNRNLLLSDKARMD 358
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
KP L+I ADDVKC+HGA + L+ LFY ++RG+ AR L ++FG EVI R P
Sbjct: 359 TKPQLEIFADDVKCAHGATVGQLDNESLFYLRSRGLTEVAARNLLTYAFGGEVINRVIVP 418
Query: 414 SIRNQVVSHV 423
S++ ++ ++
Sbjct: 419 SLKQRLEEYI 428
>gi|121489809|emb|CAK18875.1| hypothetical protein [Phillyrea latifolia]
Length = 191
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 127/179 (70%), Gaps = 12/179 (6%)
Query: 18 PKLTP--KRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQK 75
PKLTP K R + K RV Q+ A SDP V+QLAE+LEDSL SSSS P P PLQK
Sbjct: 18 PKLTPGSKTRLRTGKARVFTQSPT-LAILSDPRVLQLAETLEDSL-QSSSSAPLP-PLQK 74
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS---TDAQFP-SL 131
LRD SSQ+LLSTPWPSRKDEPFRFTDTS IK+S I+PI+ PS S ++ +D P ++
Sbjct: 75 LRDISSQSLLSTPWPSRKDEPFRFTDTSFIKNSDIEPIS-PSKSQSLAPVLSDTLLPLNI 133
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGA 189
++DG++ +S LS LPDGV+VG L + S+ MKRVS+ + FQ GDLFW +NG+GA
Sbjct: 134 TILDGYVVDSLSQLSELPDGVFVGGLSSITSEATMKRVSECVPNFQ-GDLFWLLNGVGA 191
>gi|329901919|ref|ZP_08272987.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
gi|327548918|gb|EGF33540.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
Length = 440
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 123/221 (55%), Gaps = 5/221 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y+ N+V E+ + +V H LQ + A H+ AV AS Y V V+ G ++SR N
Sbjct: 215 YFTNTVTEIALADSARVNHIRLQREGNRALHVGLCAVSLARASEYTSVSVAFGARISRVN 274
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVF 322
V V G L ++ Q D H+ +DH P G RQLHKCI S AVF
Sbjct: 275 VEVVHHGERAACTLDGLAMIDGRQLADTHT--FVDHAKPHGISRQLHKCIAGGS-AHAVF 331
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G V V AQ+ DA Q R+LLL +A ++ KP L+I A DVKC+HGA + L+ ++F
Sbjct: 332 NGKVMVRPDAQKIDARQSNRNLLLSGKAHIDTKPQLEIFASDVKCTHGATVGQLDHDEVF 391
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
Y Q+RG+D AR L ++FGAE+++R P S++ Q+ V
Sbjct: 392 YLQSRGLDEVAARNLLTYAFGAEIVDRIPIDSVKRQLAQKV 432
>gi|114331235|ref|YP_747457.1| FeS assembly protein SufD [Nitrosomonas eutropha C91]
gi|114308249|gb|ABI59492.1| Iron-regulated ABC transporter permease protein SufD [Nitrosomonas
eutropha C91]
Length = 435
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 203/434 (46%), Gaps = 68/434 (15%)
Query: 46 DPFVIQLAESL-EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
D ++ +L ES ++ PS + S L +LR ++ + S P+ +DE +RFTD S
Sbjct: 7 DDYLEKLIESWRKEGEPSRTVSY-----LNRLRANALSRIESLRLPTIRDEEWRFTDISS 61
Query: 105 IKSS---QIQPITRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPD--GVYVGSL 157
++++ + + P ST P+ LV +DG LS L D + V SL
Sbjct: 62 LRNTLFPRASTASLPGLDSQKSTFLDEPTCRLVFVDG---QYMPGLSGLTDDGSIIVCSL 118
Query: 158 LGVSDGIMKRVSDFI---SEFQCGDLFWSINGMGAPDLGVIYVPAE-------------- 200
++ + ++ ++FQ D+F ++N D I +PA
Sbjct: 119 SELTGICASKTEQYLGQLADFQ-DDVFVALNTALMHDGICIVIPANVSITVPVHILYITS 177
Query: 201 GND------CY-----------------W------ANSVLEVVIGKGGKVRHSYLQNQSL 231
G + C W N+V E+ +G+ +V H +Q ++
Sbjct: 178 GKEVAAYPRCLLVAESEAEVTIVEEYVAWQEGVSLTNAVTEIYVGESARVNHIRVQREAS 237
Query: 232 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 291
A HI + + Y+ V ++ G ++SR + + G E ++ L+ Q D
Sbjct: 238 QAFHIANNSTFVAKTAHYDSVNLALGARISRFDQKITLAGEGAECQIDGLALIADRQLAD 297
Query: 292 LHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPR 349
H+ +DH P G RQLHKCIV S VF G + V ++QQTDA QL +LLL +
Sbjct: 298 THT--FIDHASPHGRSRQLHKCIVDES-AHGVFSGEIMVRPHSQQTDARQLNHNLLLSEK 354
Query: 350 ATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIER 409
A ++ KP L+I ADDVKC+HGA + L++ LFY Q+RG E AR L ++FG E+I R
Sbjct: 355 ARMDTKPQLEIFADDVKCAHGATVGQLDKESLFYLQSRGFAEEVARNLLTYAFGGEIINR 414
Query: 410 FPYPSIRNQVVSHV 423
S+R ++ ++
Sbjct: 415 VIVASLRQRLEEYI 428
>gi|398893986|ref|ZP_10646416.1| FeS assembly protein SufD [Pseudomonas sp. GM55]
gi|398183118|gb|EJM70613.1| FeS assembly protein SufD [Pseudomonas sp. GM55]
Length = 439
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 191/420 (45%), Gaps = 69/420 (16%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS----- 123
P L++LR ++ Q + +P+ KDE +++T + I + ++P P +S +S
Sbjct: 21 HPAWLRELRSAAFQWVAEHGFPTAKDEAWKYTRVAPILETSLRP-AEPGTSRGLSDASIE 79
Query: 124 ---TDAQFPSLVLIDGFIQNSALNLSNLPDGVYV---GSLLGVSDGIMKRVSDFISEFQC 177
D P LV ++G+ L LP G V +LL G+++ + F F+
Sbjct: 80 RLIGDYGGPRLVFVNGYFAAEFSVLEELPPGTQVTHFATLLRADSGMLEAL--FSHAFRT 137
Query: 178 G-DLFWSINGMGAPDLGVIYVPAE------------------------------------ 200
F ++N A D ++ +PA
Sbjct: 138 QPQAFTALNAALAEDGALVQIPAHTTVEKPIHLVFFSDTGATPLMTHPRALVLMGAGSRL 197
Query: 201 ---------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
G + Y +N+V EV++ + H +QN+S A H+ VRQ S +
Sbjct: 198 TLVESHVGSGAEAYLSNAVSEVLLDADAVLEHYSVQNESTAAFHVALLNVRQARGSYFAA 257
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLH 309
+ G L+R V + GP E L+ +L TQ L ++ ++H PR R+L+
Sbjct: 258 HSFALGAALARQEVRIILEGPGAEVALNGLYL--PRGTQHLDNQTTIEHLAPRCTSRELY 315
Query: 310 KCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
K ++ G +FDG + V A +TDA Q ++LLL A N +P L+I ADDVKC+H
Sbjct: 316 KGVI-DDRGHGIFDGRIIVRPGAMKTDASQTNKNLLLSQLAQANTQPRLEIFADDVKCAH 374
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
GAA+ L+E +FY ++RGI L AR L++ F E+++R +R +HV+ L+
Sbjct: 375 GAAVGQLDEQAVFYLRSRGIPLAAARSLLIYGFVREMLDRIHLEPLR----AHVERLVAA 430
>gi|209516301|ref|ZP_03265158.1| FeS assembly protein SufD [Burkholderia sp. H160]
gi|209503237|gb|EEA03236.1| FeS assembly protein SufD [Burkholderia sp. H160]
Length = 441
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 185/416 (44%), Gaps = 53/416 (12%)
Query: 54 ESLEDSLPSSSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+ L + + SS+LP LP L++ R + +T + +P+ + E +++T+ + I
Sbjct: 7 DYLHQAFQTVSSTLPGAELPWLRRARHDAFETFEALGFPTTRLEDWKYTNVATIAKRPWH 66
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ S DV D LV ++G + LPD +VGSL +
Sbjct: 67 FTSPRSDEPDVERIVDQLVPDTTVGRLVFMNGHHIPRLSRVPALPDAAFVGSLTRALREM 126
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAE------------------------ 200
+R+ I+ D F ++N D V+ +P +
Sbjct: 127 PERLMGVIAHQAPHDGFAALNTAFLSDGYVVLLPPDCAIDAPLVMLFLTDEAGLAVHPFN 186
Query: 201 -------------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 241
+ Y N+V +V G V+H +QN++ NA HI V
Sbjct: 187 TIVADARSRCSIVEQFVGIADGAYLINAVTRIVTGNEADVQHCRIQNEARNAFHIAHVDV 246
Query: 242 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 301
QE AS + + GG LSR + + D EL+ + + Q D H+R+ D P
Sbjct: 247 TQERASRFTSHSFAFGGALSRTQIDTRLQDVDANAELNGLYFADAKQHVDHHTRIDHDKP 306
Query: 302 RGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 361
G R+ ++ ++ VF+G V V+R AQQTD Q +LLL A ++ KP L+I
Sbjct: 307 HGTSREYYRGVL-DGASHGVFNGKVIVHRDAQQTDTHQSNYNLLLSRDAQIDTKPQLEIH 365
Query: 362 ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
ADDVKC+HGA + L+E LFY ++RGI+ AR L+++F E +E ++RN
Sbjct: 366 ADDVKCTHGATVGQLDEEPLFYLRSRGIEERVARALLIWAFVRERLEHVGIEAVRN 421
>gi|383453126|ref|YP_005367115.1| FeS assembly protein SufD [Corallococcus coralloides DSM 2259]
gi|380734435|gb|AFE10437.1| FeS assembly protein SufD [Corallococcus coralloides DSM 2259]
Length = 436
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 193/419 (46%), Gaps = 60/419 (14%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQ-- 127
P LQ LR+ + P+ KDE +++T + + S QP+ S+ DV+
Sbjct: 20 PSWLQALREEGLSQFQARGLPTSKDEEWKYTPVATLSSHPFQPVRDVSAGEDVAQAVARL 79
Query: 128 ---FPSLVLIDGFIQNSALNLSNLPDGVYV----------GSLLGVSDGIMKRVSDF--- 171
P LV +DG + L+ LP GV + G+LL + G R S
Sbjct: 80 ALPGPRLVFVDGRFVPALSVLAGLPRGVVLKPLSQALREDGALLQETLGQRARPSAHAFT 139
Query: 172 -------------------ISEFQCGDLFWSINGMGAPDLG---VIYVPAEGNDCY---- 205
+SE LF + G G P L ++ V EG++
Sbjct: 140 SLNAALLEEGALLTLAPRALSEVPVQLLFLARGGDG-PVLASPRIVVVAGEGSEATLVET 198
Query: 206 ---------WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 256
+ N+V EV +G +RH LQ + A H+ RQ S ++ S
Sbjct: 199 YAGLGSGATFTNAVTEVSLGDNASLRHFKLQAEGDTALHLGGLYSRQGRDSRFQSHAFSF 258
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG+LSR+ VH G E L+ L V TQ L +R LDH +C R+L+K ++
Sbjct: 259 GGQLSRNEVHAAFAGEGGECVLNG--LFVGRGTQHLDNRTDLDHAVPHCSSRELYKGVL- 315
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ F G ++V AQ+TDA Q +R+LLL A V+ +P L+I ADDVKC+HG A+
Sbjct: 316 DDRARGTFHGKIRVREDAQKTDASQQSRNLLLSEGAQVDARPQLEIFADDVKCAHGTAVG 375
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV-KNLMGTTDV 432
L+++ LFY ++RGI A + L +F +E++ P +R +V + + + L GT +V
Sbjct: 376 RLDDNALFYLRSRGIPKVDAERMLTQAFASELVRAVPEGPVRARVEALLAEKLPGTAEV 434
>gi|254491895|ref|ZP_05105074.1| FeS assembly protein SufD [Methylophaga thiooxidans DMS010]
gi|224463373|gb|EEF79643.1| FeS assembly protein SufD [Methylophaga thiooxydans DMS010]
Length = 433
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 134/230 (58%), Gaps = 7/230 (3%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
YV + N + N V EV + K+ H LQ++SL HI A +Q S + +S
Sbjct: 200 YVSLQDN-VGFTNVVTEVALADKAKLHHFKLQHESLKHYHIATLASKQAANSEWNTNNIS 258
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 313
GGKL+R+++H Q LG ++ L +LL DQ D H+R+ DH P +++K ++
Sbjct: 259 LGGKLARNDIHSQLLGEESHVTLDGLYLLDGDQHVDNHTRI--DHAVPHTTSEEVYKGVM 316
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
AVF+G V V++ AQ+TDA Q R+LLL ++ KP ++I ADDVKC HG+ +
Sbjct: 317 DGE-SHAVFNGKVIVHKDAQKTDANQSNRNLLLSRTCEIDTKPEMEIYADDVKCGHGSTV 375
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
L+E+QLF+ +ARG+D +AR L ++F EV++R +R Q +S+V
Sbjct: 376 GQLDETQLFFLRARGLDEVSARSLLTYAFAVEVLQRIKAEPVR-QALSNV 424
>gi|381160203|ref|ZP_09869435.1| FeS assembly protein SufD [Thiorhodovibrio sp. 970]
gi|380878267|gb|EIC20359.1| FeS assembly protein SufD [Thiorhodovibrio sp. 970]
Length = 449
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 183/415 (44%), Gaps = 64/415 (15%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL---DVSTD 125
+P L +R ++++ + P+++ E +R+T + QP P ++L D+ D
Sbjct: 30 EPDWLTAMRAAATERASNQGVPTKRSEGWRYTSLRALIDQGFQPHQEPITALQPEDIE-D 88
Query: 126 AQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGV----SDGIMKRVSDFISEFQ 176
P L V+++G + L LP GV +GSL V +D + + + Q
Sbjct: 89 QLIPGLDSHRLVMVNGHFEPRLSQLEGLPAGVRIGSLADVLAQDADALAGLLGQIAGDGQ 148
Query: 177 CGDLFWSINGMGAPDLGVIYVPAE------------------------------------ 200
LF S+N G D V+ + A+
Sbjct: 149 --HLFTSLNTAGFDDGLVMLIDAKVRLERPVELLNISIGLDQAEGPGLAQPRHLIHLAAG 206
Query: 201 ------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 248
G+ Y N+V+E+ + + ++ H LQ +S +A H+ + Q+ AS
Sbjct: 207 AQAELIERHLSFGDALYCNNAVVEIRLAEQARLHHVRLQQESPSAYHLTGLYLEQDAASR 266
Query: 249 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 308
Y V + GG +R ++ + L P+ + EL +L Q D H + P R+
Sbjct: 267 YRSVNIGMGGVWARTDLVARFLAPEADCELQGLYLAGDGQLIDYHMDVQHLVPGCASREN 326
Query: 309 HKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCS 368
K I+ H G+AVFDG V V A QTDA R+L+L P A V+ KP L+I A+DVKCS
Sbjct: 327 FKGIL-HGKGKAVFDGRVYVAADAHQTDAAMSNRNLILSPNAEVDTKPQLEIYANDVKCS 385
Query: 369 HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
HG + L+ LFY ++RGI AR+ L F E+I+ +R Q+ V
Sbjct: 386 HGTTVGQLDPEMLFYLRSRGIAAALARRMLCLGFAGEIIDAIGSEPLREQISEAV 440
>gi|292490818|ref|YP_003526257.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
gi|291579413|gb|ADE13870.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
Length = 447
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 186/417 (44%), Gaps = 62/417 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP--S 117
L S QP L++LR + S +P K+E +++T + + P+ +
Sbjct: 18 LESEQVGAVQPW-LRELRQQALGQFQSMGFPGPKNEDWKYTRVRALAETAFTPVVSSPVA 76
Query: 118 SSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI 172
SLD P LV +DG + LP G VGSL +DG+ +
Sbjct: 77 VSLDECQGYFLPDMPCFRLVFVDGRFVPGLSEIEELPQGAVVGSL---ADGLKQEGEGLR 133
Query: 173 SEF-----QCGDLFWSINGMGAPDLGVIYVPAEG-------------------------- 201
S F F ++N D +Y+PA+
Sbjct: 134 SVFAGYADHHNQPFTALNTAFMADGAYLYLPAKAVLTKPVHLLFITTGRSDAVVTHPRNL 193
Query: 202 ------------------ND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 242
ND Y+ N+V EVV+G+G KV H LQ ++ + HI V+
Sbjct: 194 MILEPESELTVIEHYAGLNDGVYFTNAVTEVVMGRGAKVEHIKLQEEAAKSFHIATVQVQ 253
Query: 243 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 302
QE + + ++ GG+L R++++ G L + L ++ D H+R+ P
Sbjct: 254 QEQDAQFLSRNLALGGRLVRNDINSVLGGEGAGCVLEGLYALNGERHVDNHTRIDHKQPH 313
Query: 303 GYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA 362
+ +K I+ +AVF+G V V+ +AQ+ DA Q R+LLL V+ KP L+I A
Sbjct: 314 TTSEEYYKGILG-GKSRAVFNGKVIVHPHAQKVDARQANRNLLLSEGTEVDTKPELEIYA 372
Query: 363 DDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
DDVKC+HGA I L++ Q+FY ++RG++ + AR+ L +F E+++ +RN+V
Sbjct: 373 DDVKCAHGATIGQLDKDQVFYLRSRGMEEKDARQLLTHAFAEEIVKHIELLPVRNRV 429
>gi|409399870|ref|ZP_11250078.1| FeS assembly protein SufD [Acidocella sp. MX-AZ02]
gi|409131015|gb|EKN00742.1| FeS assembly protein SufD [Acidocella sp. MX-AZ02]
Length = 366
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 173/348 (49%), Gaps = 31/348 (8%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSAL--- 143
T P+RK E +RFTD I S++ +++ D+ D FP V ++G + N+AL
Sbjct: 2 TALPTRKLEAWRFTDLRQISSTEFGAPPAMAAAPDLP-DLPFPRFVFLNGTL-NAALSTA 59
Query: 144 ---------------------NLSNLPDGVYVGSLLGVSDGIMKRVSDF--ISEFQCGDL 180
N +N DG+ + GV G + +S + F
Sbjct: 60 FAYAKPFAPVQEQGAQPMALINAANAKDGINIEVPDGVDAGEVLLISQASGATPFAFHPR 119
Query: 181 FWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 240
G GA L +I + +G YW N++ ++ + +G ++H LQ +S+ A +I
Sbjct: 120 HRVTLGQGA-KLTIIEID-KGEGVYWQNALFDIDVAQGATLQHFRLQQESVEAFNITSIR 177
Query: 241 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 300
R A+ YE ++ G KLSR + +G L++ LL Q D + +
Sbjct: 178 ARIAQAAAYEHFTLTLGAKLSRTEIEADLVGETALAHLNAAQLLGGAQHGDFTTIIRHKA 237
Query: 301 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQI 360
P RQ K ++A + VF G ++V++ AQ+TD Q++++LLL P A +++KP LQI
Sbjct: 238 PNCPSRQTVKSVLAGK-ARGVFQGKIEVDQIAQKTDGYQMSQALLLSPDAEMDIKPELQI 296
Query: 361 IADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
ADDVKCSHGA I L+E Q+FY ++RGI AR+ L+ +F E +E
Sbjct: 297 FADDVKCSHGATIGALDEEQVFYLRSRGIPEADARQILIRAFLEEALE 344
>gi|430761125|ref|YP_007216982.1| Iron-sulfur cluster assembly protein SufD [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010749|gb|AGA33501.1| Iron-sulfur cluster assembly protein SufD [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 447
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 191/427 (44%), Gaps = 64/427 (14%)
Query: 52 LAESLEDSLPSSSSSLPQPLP--LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
L++ D + LP+ +P L R ++ +P + E +++T+ I +
Sbjct: 6 LSKHYADQVQHLQEVLPEGMPEWLAGRRRGAAVRFAEAGFPDPRMEEWKYTNVRPIAT-- 63
Query: 110 IQPITRPSSSLDVSTDA----QFPSL-----VLIDGFIQNSALNLSNLPDGVYV------ 154
+P + +VS D F L V +DG ++ +LS LP+G V
Sbjct: 64 -KPFVAAAGDAEVSADTVRALGFGGLDAYRMVFVDGRLRRDLSDLSELPEGAVVQGLGEA 122
Query: 155 ---------------------------------GSLLGVSDGI-MKRVSDFISEFQCGDL 180
G+L+ ++ GI ++R + GD
Sbjct: 123 LATDPDPLEPFLATLAHDRFSSFAALNTAFMNDGALVRLAQGIRLERPLHLLMLGSAGDT 182
Query: 181 -FWS-----INGMGAPDLGVI--YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 232
WS I + VI Y G + + N+V E+ G +VRH LQ+ +
Sbjct: 183 PIWSHPRVLIQAGEGAEATVIEHYADLPGANGF-TNTVTELRAEAGARVRHYLLQDHADG 241
Query: 233 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 292
A H+ V+Q S V+ GG+L RH+++V P E EL L Q D
Sbjct: 242 AYHVGSVFVQQRRDSRVTSHNVNLGGRLVRHDLNVDLTEPGAEIELLGLFLAGGRQHVDT 301
Query: 293 HSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 352
H+R+ P R+ ++ I G+ VF G V V++ AQ+TDA Q + +LLL P A +
Sbjct: 302 HTRVHHLSPNTTSRERYRGI-GQGHGRGVFKGRVLVDQGAQKTDAQQHSANLLLSPNAEI 360
Query: 353 NVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPY 412
+ KP L+I ADDVKC+HGA + L+E+ L+Y ++RGI E AR+ LVF+F EV+E
Sbjct: 361 DTKPELEIYADDVKCAHGATVGQLDETSLYYLRSRGIGTEQAREMLVFAFADEVLESMDL 420
Query: 413 PSIRNQV 419
+R +
Sbjct: 421 EPVRTNI 427
>gi|374293753|ref|YP_005040776.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum lipoferum 4B]
gi|357427156|emb|CBS90094.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum lipoferum 4B]
Length = 445
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 190/424 (44%), Gaps = 59/424 (13%)
Query: 47 PFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK 106
P ++ + + LP S S L +LR + + + P+ ++E +R+T+ +
Sbjct: 14 PALLAPLDQMGAGLPGSGLSW-----LNELRAAGRERFAAVGLPTIRNESWRYTNLRDLA 68
Query: 107 SSQIQPITRPSSSLD----VSTDAQ-FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
QP ++++D V + Q P LV +DG + ++ LP GV + SL
Sbjct: 69 KVSFQPAAPAAATIDLLPTVRAEGQDGPRLVFVDGRFRADLSSVDGLPPGVELLSLAAAL 128
Query: 162 DGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPA-------------------E 200
++D I D ++N D V++VPA +
Sbjct: 129 TTHSDLLADHIGRLAAADDRPLVALNSAYLADGAVLHVPAGVQVERPIELVFVSVGTEAQ 188
Query: 201 GNDCY---------------------------WANSVLEVVIGKGGKVRHSYLQNQSLNA 233
C+ +N V EV +G+G + H Q + A
Sbjct: 189 ATSCHPRSLLIAEAGSKAVVVEHHVGRGAGTTLSNHVTEVFVGEGATLHHYKSQREGGGA 248
Query: 234 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 293
H+ A T Y+ ++TG KLSR+ V + G + T +S +L+ Q D
Sbjct: 249 IHLSHIAATVATGGCYDNFILTTGAKLSRNEVVSRLDGTEARTHVSGGYLVRGSQHADTT 308
Query: 294 SRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
+ ++ P G R+++K ++ + +AVF G + V AQ+TD QL R+LLL A ++
Sbjct: 309 TVIVHAQPNGTSREVYKGVIDDT-ARAVFQGKITVCPDAQKTDGYQLNRALLLSDGAEID 367
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
KP L+I ADDVKCSHG +L++ LFY +ARGID +TA+ L+ +F +E +E
Sbjct: 368 SKPELEIHADDVKCSHGCTAGELDDDALFYLRARGIDRDTAQGLLIGAFLSESLEEIAEE 427
Query: 414 SIRN 417
SIR+
Sbjct: 428 SIRD 431
>gi|223936151|ref|ZP_03628065.1| FeS assembly protein SufD [bacterium Ellin514]
gi|223895373|gb|EEF61820.1| FeS assembly protein SufD [bacterium Ellin514]
Length = 449
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 183/423 (43%), Gaps = 60/423 (14%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
+S + + P L +R +S +P+ KDE +RFT+ I +P+
Sbjct: 12 DSFWEKFERLEKEIKNPSWLFPIRKASIARFAELGFPTLKDEDWRFTNVGPITKLPFKPV 71
Query: 114 -TRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
T SL+ + QF LV ++G ++ DG+ VGSL +
Sbjct: 72 FTYSKESLNEAAINQFAFTSLKSSKLVFVNGHFSKELSHILPQKDGIKVGSLAAALEADS 131
Query: 166 KRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPA------------------------ 199
+ + + G F ++N D I+VPA
Sbjct: 132 ALLEKHLGRYVKPEGTAFSALNTAFFHDGAFIHVPAGKVIEEPVHLLFVTTSKEPGTTVH 191
Query: 200 --------EGNDC-------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 238
G+ Y+ N V E+VIG+ V H Q++S A HI
Sbjct: 192 PRNLIIAERGSQATVIESYVSTVDGPYFTNVVSEMVIGEDAVVEHCKFQDESPEAFHIAA 251
Query: 239 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 298
V+ + ++ G KLSR+N+ E L+ +L +Q D H +++
Sbjct: 252 VNVQLGKGCNFIAHSIALGAKLSRNNIWTNLDAERVECVLNGLYLTKDEQLADNH--MIV 309
Query: 299 DHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
+H + +C + + I+A + VF G + V AQ+TDA Q ++LLL AT++ KP
Sbjct: 310 EHAKPHCNSHEYYNGILA-GKSRGVFHGRILVRPDAQKTDAKQTNKNLLLSDDATIDTKP 368
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
L+I ADDVKC+HGA + L E +FY +ARGI ETAR+ L+ SF E+I R ++R
Sbjct: 369 QLEIYADDVKCTHGATVGQLNEESIFYLRARGIGKETARRMLIHSFAGEIIARVRNAALR 428
Query: 417 NQV 419
++
Sbjct: 429 EEL 431
>gi|427702811|ref|YP_007046033.1| FeS assembly protein SufD [Cyanobium gracile PCC 6307]
gi|427345979|gb|AFY28692.1| FeS assembly protein SufD [Cyanobium gracile PCC 6307]
Length = 426
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
VLE +G+G ++RH L + + A+ Q T S Y V G L R + Q
Sbjct: 208 VLEARLGEGAELRHGLLAPGADTGCLLATVALEQATGSRYSGVSAHGGWALGRLEPRLVQ 267
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
+ L + L Q D HS+++ + P G QLHK VA G++VF+G V+V
Sbjct: 268 SEGAAHSALKALQLADGRQISDTHSQMVFEGPDGRLEQLHKA-VADGQGRSVFNGAVQVP 326
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+TDA QL+R+LLL RA ++ KP L+I+ADDV+C+HGA +S LE+ +LFY Q+RGI
Sbjct: 327 RAAQRTDAAQLSRNLLLSDRARIDTKPELEIVADDVRCAHGATVSRLEQDELFYLQSRGI 386
Query: 390 DLETARKALVFSFGAEVIERFP 411
+ A + L+ F EV++ P
Sbjct: 387 AADQAARLLLRGFCEEVLQELP 408
>gi|407716313|ref|YP_006837593.1| iron-regulated ABC transporter permease protein SufD
[Cycloclasticus sp. P1]
gi|407256649|gb|AFT67090.1| Iron-regulated ABC transporter permease protein SufD
[Cycloclasticus sp. P1]
Length = 443
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 186/402 (46%), Gaps = 67/402 (16%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L LR +++ ++ +P+ ++E +R+T+ + I+ +Q T P + V D+ F
Sbjct: 30 LANLRKQAAEQFSASGFPTFREEEWRYTNITPIEKNQF---TLPDVAGQV--DSAFVDSV 84
Query: 131 -------LVLIDGFIQNSALNLSNLPDGVYVGSL-----------------------LGV 160
+V +DGF Q +L ++P+GV V +L LG
Sbjct: 85 LLDDCHHIVFVDGFYQAELSSLKDIPNGVIVSALSDGLVDNEALIKSLLDSVVETPALGF 144
Query: 161 --------SDGIMKRVSD-----------FISEFQCGDLFWS-----INGMGAPDLGVIY 196
SDG + + + FIS Q G L S I + +I
Sbjct: 145 INFNTALFSDGALICIEENTVVDKPIQVAFISSKQ-GALTLSNTRNLILAQASSKAQIIE 203
Query: 197 VPAEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+D CY N V EVV+ + H LQ++S +A HI R E + + +
Sbjct: 204 TYHAVDDSCYLTNVVSEVVVEPNANLSHHRLQSESTSAYHIGGVYSRLEKNAIFNQNSYT 263
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA- 314
G +SR H LG ++ + ++ Q D H+RL P + +K I+
Sbjct: 264 FGASISRTEAHAT-LGEASDCTMDGLYVGQDRQHMDQHTRLNHAQPHAVSNEFYKGILGD 322
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
HS G VF G + V + AQ+TDA R+LLL RA V+ KP L+I ADDVKC+HG +
Sbjct: 323 HSTG--VFQGRIIVAQDAQKTDAAMNNRNLLLSDRAEVDTKPQLEIYADDVKCAHGVTVG 380
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
L+++ +FY Q+RG+D +TA+ L F+F E+IER + +R
Sbjct: 381 QLDDAAVFYLQSRGVDNQTAKNMLTFAFANEMIERVSFEPLR 422
>gi|392377260|ref|YP_004984419.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum brasilense Sp245]
gi|356878741|emb|CCC99631.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum brasilense Sp245]
Length = 451
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 197/441 (44%), Gaps = 72/441 (16%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
+ PF+ Q + ++D LP + S L LR + P+ K+E +R+T+
Sbjct: 18 AKPFLEQF-DRVKDGLPGAGLSW-----LNDLRSQGHHRFAALGLPTVKNESWRYTNLRA 71
Query: 105 IKSSQIQPITRPSSSL------DVSTDAQF-PSLVLIDGFIQNSALNLSNLPDGVYVGSL 157
+ QP ++ V TD P LV +DG + + + LP GV L
Sbjct: 72 LDKLAFQPAAGTGDTVRFDVLPTVRTDGTTGPRLVFVDGRFRAELSSTAGLPAGV---EL 128
Query: 158 LGVSDGIMKR---VSDFISEFQCGD--------------------------------LFW 182
L ++D + ++ V++ + D +F
Sbjct: 129 LNLADALARKPDLVAEHLGRIAAPDDQPLVALNTAFLADGPVLHVPRGVTVEETIELVFV 188
Query: 183 SINGMGAPDL----GVIYVPAE------------GNDCYWANSVLEVVIGKGGKVRHSYL 226
S+ P G+I AE G+ +N V EV +G+G V H +
Sbjct: 189 SVGSEAQPTAFHPRGLIVAEAESRAVIVEHHVGLGSCTTLSNGVTEVFVGEGALVHHYKV 248
Query: 227 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 286
Q + + H+ TA + Y+ ++ G KLSR+ V+ G + +T +S +++
Sbjct: 249 QREHAESFHLSHTAAKVAGKGVYDNFILTIGAKLSRNEVNSVLDGEEGDTHVSGAYMVRG 308
Query: 287 DQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSL 344
Q D + +DH + C R+++K ++ +AVF G + V AQ+TD Q R+L
Sbjct: 309 GQHVD--TTTFIDHAKPCCTSREVYKGVI-DDQARAVFQGKIIVRPNAQKTDGYQQNRAL 365
Query: 345 LLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGA 404
LL A ++ KP L+I ADDVKCSHGA + +L++ QLFY +ARGID AR L+ +F +
Sbjct: 366 LLSDTAEIDAKPELEIYADDVKCSHGATVGELDDDQLFYLRARGIDKAAARGLLIGAFLS 425
Query: 405 EVIERFPYPSIRNQVVSHVKN 425
E + S+R+ S+V +
Sbjct: 426 EALGEIAEESVRDAFQSYVAD 446
>gi|347539983|ref|YP_004847408.1| FeS assembly protein SufD [Pseudogulbenkiania sp. NH8B]
gi|345643161|dbj|BAK76994.1| FeS assembly protein SufD [Pseudogulbenkiania sp. NH8B]
Length = 438
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 192/419 (45%), Gaps = 53/419 (12%)
Query: 53 AESLEDSLPSSSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
A+ D+ +++LP LP L++ R++ +P+ + E +++T + I+ S+
Sbjct: 5 ADFYRDAFARVATTLPGSELPWLRRGREAGLAFFAEAGFPTLRQEDWKYTSVAAIEKSRF 64
Query: 111 QPITRPSSS-----LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL-------- 157
P ++ +D A LV ++G Q N+ LP GV + SL
Sbjct: 65 MPPPPTANGVAPGLIDAWGLAGTQRLVFVNGRYQPRWSNIGPLPAGVTLASLAEVLERDP 124
Query: 158 ------LGV-----------------SDGIMKRVSDFIS-EFQCGDLFWSIN-GMGAPDL 192
LGV SDG+ ++ ++ E LF + G+
Sbjct: 125 QRLEGVLGVLPAGYPSGFAALNQAFFSDGVYLDLAAGVALETPVHLLFVTTEAGLALHTR 184
Query: 193 GVIYVPAEGNDC------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 240
V+ A C Y +N+ ++V+G+ ++ H LQ +SL A H+
Sbjct: 185 NVVRAEAGSRACLIEHHVALGDGAYLSNTATDLVVGQDAEIEHLKLQQESLKAFHVAALD 244
Query: 241 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 300
V Q+ S + + GG L+R ++ V L ++ Q D H+R+
Sbjct: 245 VDQQQGSHFISRSFALGGGLARVDIRVGLNAEHAACTLDGLYMTDGRQHSDHHTRIDHAR 304
Query: 301 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQI 360
P G R+ +K ++A + +AVF+G V V AQ +DA Q R+LLL A ++ KP L+I
Sbjct: 305 PYGTSREFYKGVLAGA-SRAVFNGRVVVQADAQHSDAYQANRNLLLSDNAEIDTKPQLEI 363
Query: 361 IADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
ADDVKCSHGA + L+ Q+FY ++RG+D AR L F+F AE++ R +R ++
Sbjct: 364 YADDVKCSHGATVGQLDPEQVFYLRSRGVDEADARALLTFAFAAEMVGRIDMAPLRARL 422
>gi|345871237|ref|ZP_08823184.1| FeS assembly protein SufD [Thiorhodococcus drewsii AZ1]
gi|343920647|gb|EGV31376.1| FeS assembly protein SufD [Thiorhodococcus drewsii AZ1]
Length = 442
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 120/223 (53%), Gaps = 1/223 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ Y NSVLE+ +G+ ++H +Q +S NA HI + Q S Y+ V + G
Sbjct: 211 GDSIYCTNSVLELALGRDALLKHDRIQMESPNAFHITGLYLTQSANSHYQGVNIGLGASW 270
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
SR +++ + G E +L +L Q D H +L P R+ K I+ + G+A
Sbjct: 271 SRTDLNCRFQGEHAECDLQGLYLAGDRQLMDYHLDVLHSLPNCSSRETFKGIL-YGRGRA 329
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VFDG V V AQ+TDA R+LLL ++ V+ KP L+I ADDVKCSHG + +E
Sbjct: 330 VFDGRVFVAPQAQKTDAAMSNRNLLLSEQSEVDTKPQLEISADDVKCSHGTTVGQIEPEM 389
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
LFY ++RGI AR+ L F EV++R ++R+ V V
Sbjct: 390 LFYLRSRGIGASLARRMLCLGFADEVVQRLSSDALRDHVSEQV 432
>gi|427428786|ref|ZP_18918825.1| Iron-sulfur cluster assembly protein SufD [Caenispirillum salinarum
AK4]
gi|425881449|gb|EKV30136.1| Iron-sulfur cluster assembly protein SufD [Caenispirillum salinarum
AK4]
Length = 450
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 189/424 (44%), Gaps = 67/424 (15%)
Query: 55 SLEDSLPSSSSSLP--QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
+L D+LP + S+LP Q ++ R+ ++ + P+ K E +++T+ + +P
Sbjct: 11 ALSDTLPGAGSALPGGQIAWVRHAREEGAKLWQAHGAPTVKVEQWKYTNLREMLKVPFRP 70
Query: 113 ITRPSSSLDVST---------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
RP+ + + T DA LV ++G +L LP GV V +L + +
Sbjct: 71 -ARPAHEIGLETIPAGDALTLDAHV--LVFVNGHFSAEMSDLDTLPKGVAVSTLATLLET 127
Query: 164 IMKRVSDFISEF-QCGDLFWSINGMGAPDLGVI--------------------------- 195
V FI DL ++ GA + G +
Sbjct: 128 EPHAVEPFIGRLADAADLPFAALNQGALEDGFVVRVKTGTALEKPLHIVQVSAAEDEPTA 187
Query: 196 --------------------YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 235
++ + N+V E+ + + + H LQN A +
Sbjct: 188 HQPRNVVVLENGAVATVLESWIGTTSDTPSLRNAVTEIHVAQDAVLTHQILQNLPERAYN 247
Query: 236 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 295
+ TAV+ E Y+ + GGKLSRH++ V+ G E L+ + + TQ + +
Sbjct: 248 VAATAVKVEAKGVYDSFVLQVGGKLSRHDLRVELAGRHAECRLNGAY--GASGTQHMDTT 305
Query: 296 LLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
+DH P +++K ++A + VF G + V R AQQTD QL ++LLLE A V+
Sbjct: 306 SFIDHAVPECTSNEIYKGVLAGK-AKGVFQGKILVRREAQQTDGNQLHKALLLERGAEVD 364
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
KP L+I ADDV CSHGA +L+ LFY ++RGID ETAR L+ F +V+ER P
Sbjct: 365 TKPELEIYADDVTCSHGATTGELDPVALFYLRSRGIDPETARMLLIEGFLDDVVERIPGE 424
Query: 414 SIRN 417
+ R
Sbjct: 425 ANRE 428
>gi|350561305|ref|ZP_08930144.1| FeS assembly protein SufD [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349781412|gb|EGZ35720.1| FeS assembly protein SufD [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 447
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 190/427 (44%), Gaps = 64/427 (14%)
Query: 52 LAESLEDSLPSSSSSLPQPLP--LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
L++ D + LP+ LP L R ++ +P + E +++T+ I +
Sbjct: 6 LSQHYADQVQHLQEILPEGLPEWLAGRRRGAAVRFAEAGFPDPRMEEWKYTNVRPIAT-- 63
Query: 110 IQPITRPSSSLDVSTDA----QFPSL-----VLIDGFIQNSALNLSNLPDGVYV------ 154
+P + DVS D F L V +DG ++ NL+ LP+G V
Sbjct: 64 -KPFVAAAGDADVSADTVRALGFDGLDAYRMVFVDGRLRRDLSNLAGLPEGAVVQGLGEA 122
Query: 155 ---------------------------------GSLLGVSDGI-MKRVSDFISEFQCGDL 180
G+++ ++ G+ ++R + GD
Sbjct: 123 LATDPDPLEPFLATLAHDRFSSFAALNTAFMNDGAVVRLAPGVRLERPLHLLLLGSAGDA 182
Query: 181 -FWS-----INGMGAPDLGVI--YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 232
WS I + VI Y G + + N+V E+ G +VRH LQ+ +
Sbjct: 183 PTWSHPRVLIQAGEGAEATVIEHYADLPGANGF-TNTVTELRAEAGARVRHYLLQDHADG 241
Query: 233 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 292
A H+ V+Q S V+ GG+L RH+++V P E EL L Q D
Sbjct: 242 AYHVGSVFVQQRRDSRVTSHNVNLGGRLVRHDLNVDLTEPGAEIELLGLFLAGGRQHVDT 301
Query: 293 HSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 352
H+R+ P R+ ++ I G+ VF G V V++ AQ+TDA Q + +LLL P A +
Sbjct: 302 HTRVHHLSPHTTSRERYRGI-GQGHGRGVFKGRVLVDQGAQKTDAQQHSANLLLSPNAEI 360
Query: 353 NVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPY 412
+ KP L+I ADDVKC+HGA + L+E+ L+Y ++RGI AR+ LVF+F EV+E
Sbjct: 361 DTKPELEIYADDVKCAHGATVGQLDETSLYYLRSRGIGEAEAREMLVFAFADEVLESMDL 420
Query: 413 PSIRNQV 419
+R +
Sbjct: 421 EPLRANI 427
>gi|390575630|ref|ZP_10255717.1| FeS assembly protein SufD [Burkholderia terrae BS001]
gi|389932429|gb|EIM94470.1| FeS assembly protein SufD [Burkholderia terrae BS001]
Length = 447
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 191/432 (44%), Gaps = 68/432 (15%)
Query: 54 ESLEDSLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
ESL D + + L + LP L+ +R S+ + P+ + E +++T+ S+I
Sbjct: 4 ESL-DHFHEAFAQLAKRLPGAELPWLRAVRRSAFDQFNALGLPTTRHEDWKYTNVSVIGK 62
Query: 108 SQIQPITRPSSSL-------------DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV 154
++ + L +++ D LV ++G ++ LP GV+V
Sbjct: 63 RPWHFASQRTDRLGLIDGSDVQGIVDELALDPAGHRLVFVNGLHAPRLSKVNGLPHGVFV 122
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD-LGVIYVPAE------------- 200
GSL + +R+ I+ D F +++ D V+ P E
Sbjct: 123 GSLARALREMPQRLQGTIAAQTYADGFTALSTAFLTDGFAVVLPPGEVIDQPLHMLFLTD 182
Query: 201 -----------------------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 231
G D YW N+V +V + V+H LQ +
Sbjct: 183 EGGLAVQPFNVVLAGARSGCVIVEHFVGLGGDAYWTNAVTRIVADEQADVQHYRLQQEGS 242
Query: 232 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 291
A HI A Q+ AS + + G LSR + + + L+ + + Q D
Sbjct: 243 KAFHIASVAAAQQRASCFTSHAFAFGAALSRTGIDTSLNAANAQATLNGLYFVGGRQHVD 302
Query: 292 LHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPR 349
H+R+ DH +C R+ ++ ++ + VF+G + V+R AQ+TD Q +LLL
Sbjct: 303 HHTRI--DHAAPHCTSREYYRGVL-DGAARGVFNGRIIVHRDAQKTDTHQANHNLLLSRD 359
Query: 350 ATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIER 409
A V+ KP L+I ADDVKC+HGA + L+E+QLFY +ARG++ TA L ++F +++ER
Sbjct: 360 AEVDTKPQLEIYADDVKCTHGATVGQLDENQLFYLRARGVEEHTAWALLTYAFARDIVER 419
Query: 410 FPYPSIRNQVVS 421
S+R ++ S
Sbjct: 420 VRIDSLRGRLES 431
>gi|163796147|ref|ZP_02190109.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
gi|159178606|gb|EDP63146.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
Length = 429
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 119/210 (56%), Gaps = 5/210 (2%)
Query: 200 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
+G Y AN V E+++G G ++ HS LQ ++ A H+ T+VR + Y+ ++TG +
Sbjct: 194 QGTGAYMANPVTEIIVGAGARLSHSVLQAEAAEAFHVAMTSVRLADKATYDGFVLATGAR 253
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSL 317
L+RH V + G + ++ +L DQ DL + +DH P G ++ K ++
Sbjct: 254 LARHEVRAELAGRHIDYRINGVYLGAGDQHHDLTT--FIDHAQPHGASHEMVKGVLT-GR 310
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
+ VF G + V AQ+TD Q+ R+LLL A V+ KP L+I ADDVKCSHGA + +L+
Sbjct: 311 SRGVFQGKILVRPNAQKTDGFQMNRALLLSRDAEVDSKPELEIYADDVKCSHGATVGELD 370
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVI 407
+ QLFY ARGI AR LV ++ E I
Sbjct: 371 DDQLFYLMARGIPKARARALLVEAYVLEAI 400
>gi|288961956|ref|YP_003452266.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
gi|288914236|dbj|BAI75722.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
Length = 454
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 184/422 (43%), Gaps = 57/422 (13%)
Query: 47 PFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK 106
P + + L LP S S L +LR + + + P+ K+E +R+T+ +
Sbjct: 25 PAFLAPLDQLGAGLPGSGLSW-----LTELRAAGRERFAAVGLPTIKNESWRYTNLRDLA 79
Query: 107 SSQIQPITRPSSSLDVSTDAQF---PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
+ ++S+D+ + P LV +DG + ++ LP GV + SL
Sbjct: 80 KTSFLSAAPAAASIDLLPTLRAEGGPRLVFVDGRFRADLSSVGGLPPGVELLSLAAALTS 139
Query: 164 IMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPA---------------------- 199
++D I D ++N D V++VPA
Sbjct: 140 HGDLLADHIGRLAVADDRPLVALNSAYLADGPVLHVPAGVQVERPVELVFVSVGSEAQAT 199
Query: 200 ------------------------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 235
G AN V EV +G+G + H Q + A H
Sbjct: 200 ACHPRSLLVAEAGSKAAVVEHHVGRGAGTTLANHVTEVFVGEGATLHHYKSQCEGGGAIH 259
Query: 236 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 295
+ A Y+ ++TG KLSR+ V + G D T +S +L+ Q D +
Sbjct: 260 LSHIAATVAAGGCYDNFILTTGAKLSRNEVVSRLDGTDARTHVSGGYLVRGTQHADTTTL 319
Query: 296 LLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVK 355
++ P G R+++K ++ S +AVF G + V AQ+TD QL R+LLL A ++ K
Sbjct: 320 IVHAQPNGTSREVYKGVIDDS-ARAVFQGKITVCPGAQKTDGYQLNRALLLSDGAEIDSK 378
Query: 356 PNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
P L+I ADDVKCSHG +L++ LFY +ARGID +TA+ L+ +F +E +E SI
Sbjct: 379 PELEIHADDVKCSHGCTAGELDDDALFYLRARGIDRDTAQGLLIGAFLSESLEEIAEESI 438
Query: 416 RN 417
R+
Sbjct: 439 RD 440
>gi|407781307|ref|ZP_11128526.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Oceanibaculum indicum P24]
gi|407208190|gb|EKE78116.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Oceanibaculum indicum P24]
Length = 442
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 121/221 (54%), Gaps = 12/221 (5%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y++N V+E V+G+G + H LQN+S A HI T + + Y+ + TG +L+R+
Sbjct: 213 AYFSNGVMEAVLGEGAHLEHYKLQNESPEAFHIANTRISVASQGFYDGFVLQTGSRLARN 272
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAV 321
V V G + LS +L Q L + +DH P R+++K ++ V
Sbjct: 273 EVQVALNGENARCHLSGAYL--GTGRQHLDNTTFIDHAVPDCASREVYKGVLDER-AHGV 329
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V R AQ+TD QL R+LLL A VN KP L+I ADDVKCSHGA + +L E QL
Sbjct: 330 FQGKILVRRDAQRTDGHQLNRALLLSREAEVNAKPELEIYADDVKCSHGATVGELAEEQL 389
Query: 382 FYFQARGIDLETARKALVFSFGAEVIE-------RFPYPSI 415
FY QARGID TAR L+ ++ E ++ R P+ +
Sbjct: 390 FYLQARGIDRATARVLLIEAYVQEAVDEIGNVEARLPFQRV 430
>gi|288940481|ref|YP_003442721.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
gi|288895853|gb|ADC61689.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
Length = 433
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 188/430 (43%), Gaps = 64/430 (14%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L LE L + S P P L + R ++ L + P P K E +R+T+ +
Sbjct: 5 LHSGLEHWLSAPDDS-PAPDWLLEHRRAARARLSTQPLPHSKQEAWRYTNLKGLLEQDFT 63
Query: 112 PITRPSSSL---DVST------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
I P S+L D+ T DA +VL++G L LP G +G L D
Sbjct: 64 AIEEPLSALQPEDLDTVLIPGFDAH--RVVLVNGRFAPELSTLGELPAGARIGGLRDWLD 121
Query: 163 GIMKRVSDFI--SEFQCGDLFWSINGMGAPDLGVIYV--------PAE------------ 200
+ + + + + G F +N G D V+++ P E
Sbjct: 122 HDPESLRGRLDAARGESGAFFALLNTAGLDDGLVVWLARGVILERPLELIHLSVGLDEPR 181
Query: 201 -------------------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 235
G Y N+V+EVV+ + ++H LQ +S NA H
Sbjct: 182 VAQPRHLVHLEAGAQATLVERYVSLGESLYCTNAVMEVVLERDAVLKHERLQMESRNAFH 241
Query: 236 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 295
+ + Q+ S Y V + G + +R +++ + G E L +L Q D H
Sbjct: 242 LTGFYLVQDENSHYAGVNIGLGARWARTDLNTRFRGEQAECVLHGLYLAGDGQLLDYH-- 299
Query: 296 LLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
L ++H CR + K ++ G+AVFDG V V++ AQ++DA R+L+L +A ++
Sbjct: 300 LDVEHAVPNCRSEENFKGLLTGQ-GRAVFDGRVLVSKDAQKSDAAMSNRNLMLSEQAEID 358
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
KP L+I ADDVKCSHG + +E LFY ++RGID AR+ L F E+I+R
Sbjct: 359 TKPQLEIYADDVKCSHGTTVGQIEPEMLFYLRSRGIDAAQARRMLCLGFAGEIIDRLSDE 418
Query: 414 SIRNQVVSHV 423
++R V V
Sbjct: 419 AVRECVAEAV 428
>gi|358637797|dbj|BAL25094.1| putative Fe-S assembly protein [Azoarcus sp. KH32C]
Length = 441
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 185/427 (43%), Gaps = 61/427 (14%)
Query: 44 FSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS 103
F D FV E + LP +S +P +++LR + + P+ +DE +++T +
Sbjct: 13 FVDRFVAAFVER-QSRLPGAS--VPW---IRRLRSEAIERFAELGLPTTRDEDWKYTSVA 66
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQ---FPS---LVLIDGFIQNSALNLSNLPDGVYVGSL 157
I + +S V P LV +DG + + LP+G ++GSL
Sbjct: 67 GIARRAFDVVVADASLEGVGERVAAYALPGTHRLVFVDGHYVSGLSQVGALPEGAHIGSL 126
Query: 158 LGVSDGIMKRVSDFISEFQCGDLFWSIN-------------------------------- 185
S R+++ D F ++N
Sbjct: 127 ALASVAHADRLAEIFGGGNAADGFGALNEALWSDGAWIDLAPGVVVEEPVHLLFMTTRSD 186
Query: 186 -----------GMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 234
G GA + + Y ++V +V+GK +V H+ LQ +
Sbjct: 187 GASFPHNLVHVGDGASVTMIEHHVGPDEASYLTDAVTRIVVGKAARVNHTKLQQEGRKGF 246
Query: 235 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 294
HI A Q S + + G +L+R + +LG +TEL L VSD + +
Sbjct: 247 HIARVAAEQARDSRFGSHAFAFGAQLARSEI-ATRLGEGCDTELVG--LYVSDGRRHVDH 303
Query: 295 RLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 352
+DH PRG R+L+K ++ S +AVF+G V V AQ TDA Q R+LLL A V
Sbjct: 304 HTFIDHAEPRGTSRELYKGVLDGS-ARAVFNGRVIVRPDAQGTDARQTNRNLLLSDDAEV 362
Query: 353 NVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPY 412
+ KP L+I ADDVKC+HGA + L+E QL+Y ++RG+ AR L+ +F E + +
Sbjct: 363 DTKPQLEIWADDVKCAHGATVGQLDEDQLYYLRSRGVGEADARDLLIRAFALETLGSIAF 422
Query: 413 PSIRNQV 419
+R ++
Sbjct: 423 DPLRARL 429
>gi|296136902|ref|YP_003644144.1| FeS assembly protein SufD [Thiomonas intermedia K12]
gi|295797024|gb|ADG31814.1| FeS assembly protein SufD [Thiomonas intermedia K12]
Length = 439
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 176/404 (43%), Gaps = 57/404 (14%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD------- 121
+P + + R + + LL + P+R E +++T + + + +T PS+ L+
Sbjct: 21 EPARVAQARRQALEALLRSGLPTRHSEDWKYTSLRALDAMDL-AVTAPSARLNEEALRAA 79
Query: 122 ---VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
+ DA P LV +DG L++LP GV + + G
Sbjct: 80 GALLVGDA--PRLVFVDGAFDAELSRLNDLPPGVSLAPWGARQSPSATGAGTVLDAAAPG 137
Query: 179 DLFWSINGMGAPD-----LG----------VIYVP--------------AEGNDC----- 204
F +IN M A D LG V+ V +G+
Sbjct: 138 GAFDAINRMFARDGMALELGAGVCLDAPIVVVMVQTRAGASHVRHALRLGQGSSARVIEQ 197
Query: 205 ---------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
Y A+SV + +G K++H LQ++S A H+ Q S + +
Sbjct: 198 HLGLAQVGPYLASSVTRAELARGAKLQHVRLQDESDAAVHVSQLHAAQGEDSQLDAQILV 257
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
G +LSR H+ P T+L +L +Q D+H + HPRG R + + +
Sbjct: 258 LGSRLSRQEFHIAHAAPGCHTDLRGVSVLAGEQHGDVHMGIDHRHPRGTSRTVVRGVFDD 317
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
+ VF G V V+ AQ+TDAG + R+LLL PRA + +P LQI ADDV CSHGA +
Sbjct: 318 A-AHGVFTGRVNVHPGAQKTDAGMINRNLLLSPRAEADTRPQLQIDADDVLCSHGATVGQ 376
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
L+ LFY Q+RGI AR LV +F A+ + + +R QV
Sbjct: 377 LDAEALFYLQSRGIAAPLARALLVQAFVAQALPDIGWEPLRAQV 420
>gi|420251173|ref|ZP_14754360.1| FeS assembly protein SufD [Burkholderia sp. BT03]
gi|398058522|gb|EJL50415.1| FeS assembly protein SufD [Burkholderia sp. BT03]
Length = 447
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 191/432 (44%), Gaps = 68/432 (15%)
Query: 54 ESLEDSLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
ESL D + + L + LP L+ +R S+ + P+ + E +++T+ S+I
Sbjct: 4 ESL-DHFHEAFAQLAKRLPGAELPWLRAVRRSAFDQFNALGLPTTRHEDWKYTNVSVIGK 62
Query: 108 SQIQPITRPSSSL-------------DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV 154
++ + L +++ D LV ++G ++ LP GV+V
Sbjct: 63 RPWHFASQRTDRLGLIDGSDVQGIVDELALDPAGHRLVFVNGLHAPRLSKVNGLPHGVFV 122
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD-LGVIYVPAE------------- 200
GSL + +R+ I+ D F +++ D V+ P E
Sbjct: 123 GSLARALREMPQRLQGTIAARTYTDGFTALSTAFLTDGFAVVLPPGEVIDQPLHMLFLTD 182
Query: 201 -----------------------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 231
G D YW N+V +V + V+H LQ +
Sbjct: 183 EGGLAVQPFNVVLAGARSGCVIVEHFVGLGGDAYWTNAVTRIVADEQADVQHYRLQQEGS 242
Query: 232 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 291
A HI A Q+ AS + + G +SR + + + L+ + + Q D
Sbjct: 243 KAFHIASVAAAQQRASCFTSHAFAFGAAISRTGIGTSLNAANAQATLNGLYFVGGRQHVD 302
Query: 292 LHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPR 349
H+R+ DH +C R+ ++ ++ + VF+G + V+R AQ+TD Q +LLL
Sbjct: 303 HHTRI--DHAAPHCTSREYYRGVL-DGAARGVFNGRIIVHRDAQKTDTHQANHNLLLSRD 359
Query: 350 ATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIER 409
A V+ KP L+I ADDVKC+HGA + L+E+QLFY +ARG++ TA L ++F +++ER
Sbjct: 360 AEVDTKPQLEIYADDVKCTHGATVGQLDENQLFYLRARGVEEHTAWALLTYAFARDIVER 419
Query: 410 FPYPSIRNQVVS 421
S+R ++ S
Sbjct: 420 VRIDSLRGRLES 431
>gi|387127402|ref|YP_006296007.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM1]
gi|386274464|gb|AFI84362.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM1]
Length = 434
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 189/398 (47%), Gaps = 59/398 (14%)
Query: 74 QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----IQPITRPSSSLDVSTDAQF 128
+ LR+ + P RK+E +++T + + +QP + L + DA
Sbjct: 29 KSLREQAQYQFERMGLPGRKEEDWKYTSLWQLGQEEFRHRVVQPGFVETHELKLVVDAY- 87
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSING 186
+V+IDG + +A +++ LP G+ +L +S I +R S+F++ + F +IN
Sbjct: 88 -RIVIIDGRVDLTASSIAQLPSGL---TLTPLSKSI-ERASEFLNRQINMEKPGFNAINT 142
Query: 187 M--------------------------------GAPDLGVIYVPAEGN-----DCYWANS 209
M A L + V +G+ + Y N+
Sbjct: 143 MLMNEGVFIEVAANTKIDKPIELIVANSGHTPHYAMHLRHVIVLGKGSQATFIETYAGNN 202
Query: 210 --------VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
V E+ + + ++ H LQ +SL+ H+ A Q S + +S G KL+
Sbjct: 203 EANGLTDVVTEISLAENAELFHYKLQRESLDHYHVATMAATQAADSKWHNTNISLGAKLA 262
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R++VH Q +G + ++ +L+ +Q D H+R+ P +++K ++ AV
Sbjct: 263 RNDVHSQLVGEQSHVTMNGLYLVTGEQHVDNHTRIDHSVPNTTSEEVYKGVLDEQ-SHAV 321
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G V V++ AQ+TDA Q R+LLL ++ KP ++I ADDVKC HG+A+ + E QL
Sbjct: 322 FNGKVIVHKDAQKTDANQSNRNLLLSRGCEIDTKPEMEIYADDVKCGHGSAVGQINEDQL 381
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
F+ ++RG+D +AR L F+F +VIER ++ +
Sbjct: 382 FFLRSRGLDEVSARSLLTFAFAVDVIERIANQELKQSI 419
>gi|317967990|ref|ZP_07969380.1| ABC transporter, membrane component [Synechococcus sp. CB0205]
Length = 412
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 115/205 (56%), Gaps = 1/205 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
V+E + + ++RH + +AA AV QE S L V+ G L+RH + Q
Sbjct: 195 VIEAHLARSAQLRHGLVAFGQSDAALFSHIAVEQEPESQAALSNVAAGWGLARHEPRLVQ 254
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
+ + L L+ Q D HS + P G Q+HK + A G++VF+G V+V
Sbjct: 255 VQGQAHSLLRGLQLVGGQQIADTHSFVQFSGPEGELDQVHKAVAAGQ-GRSVFNGAVRVP 313
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQQT+A QL+R+LLL RA ++ KP L+I+ADDVKC+HGA +S L+ +LFY Q+RGI
Sbjct: 314 REAQQTNAAQLSRNLLLSDRARIDTKPELEIVADDVKCAHGATVSSLQTDELFYLQSRGI 373
Query: 390 DLETARKALVFSFGAEVIERFPYPS 414
E A L +F EV+ P P+
Sbjct: 374 GAEQAAGLLKRAFCEEVLRALPEPA 398
>gi|124022015|ref|YP_001016322.1| ABC transporter [Prochlorococcus marinus str. MIT 9303]
gi|123962301|gb|ABM77057.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9303]
Length = 416
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
++E + K+ H L AA + AV QE +S LV V G + RH + Q
Sbjct: 200 LVEAHLQSEAKLSHGLLAFGHPQAALLAHLAVEQEPSSDVSLVSVCQGWGVIRHEPQLIQ 259
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
L +++L + L+ ++Q D HS + + P G QLHK +VA G++VF+G V+V
Sbjct: 260 LNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHK-VVAAGHGRSVFNGVVQVP 318
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+TDA QL+RSLLL RA ++ KP L+I+ADDVKC+HGA +S L+ LFY Q+RGI
Sbjct: 319 REAQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFYLQSRGI 378
Query: 390 DLETARKALVFSFGAEVIERFP 411
+ A + L+ +F EVI P
Sbjct: 379 SPDQAAQLLLRAFCDEVICMLP 400
>gi|296536719|ref|ZP_06898779.1| FeS assembly protein SufD [Roseomonas cervicalis ATCC 49957]
gi|296262950|gb|EFH09515.1| FeS assembly protein SufD [Roseomonas cervicalis ATCC 49957]
Length = 429
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 182/403 (45%), Gaps = 61/403 (15%)
Query: 54 ESLEDSLPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI-Q 111
E L LP Q LP L LR+ + + P+R+ E +++TD + + + +
Sbjct: 17 EGLRARLPG------QGLPWLTALRERGIEAFRALGLPTRRVEAWKYTDLAPVAQAGFAE 70
Query: 112 PITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD--GIMKRVS 169
P+T +L + A +V +DG + L+ S+ P +L G + R+
Sbjct: 71 PLTPVDGALPLPRAAAPKRIVFVDGRYRAD-LSDSDAPVKSLAANLPAAEGLLGSVARLD 129
Query: 170 DF------ISEFQCGDLFWSINGMGAPDLGVIYVP-------------------AEGNDC 204
D + F+ G L I+ D GV+ V AEG
Sbjct: 130 DLPLVALNTALFEDGVL---IDLGPGEDGGVVEVLHVTLADRPVAAHPRHLVRLAEGAKL 186
Query: 205 Y-----WANSV------------LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 247
W + V E +GK V H+ LQ +SL+ H+ T R E
Sbjct: 187 VLIERAWGHGVGGTESRTLHSPVWEFAVGKAAHVTHARLQQESLSGVHLATTFARVEAEG 246
Query: 248 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 305
Y+ + G KLSR HV GP L+ LL Q D + LDH C
Sbjct: 247 TYDSFLLHAGAKLSRSEAHVVLAGPKAAAHLNGAQLLADGQHGDCTT--FLDHAAPDCPS 304
Query: 306 RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDV 365
RQ K +++ + VF G + V++ AQ+TD Q+ ++LLL +A ++ KP L+I ADDV
Sbjct: 305 RQTVKTVLSGK-SRGVFQGKIHVHQVAQRTDGYQMNQALLLSDQAEIDSKPQLEIYADDV 363
Query: 366 KCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
KCSHGA + +L+E+QLFY +ARGI ETAR L+ +F E +E
Sbjct: 364 KCSHGATVGELDEAQLFYLRARGIPEETARAMLIEAFLLEAVE 406
>gi|410943157|ref|ZP_11374898.1| ABC transporter permease [Gluconobacter frateurii NBRC 101659]
Length = 398
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 170/343 (49%), Gaps = 12/343 (3%)
Query: 76 LRDSSSQTLLST-PWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLI 134
L D+ +QT+L+ P P +++ ++ S S+ VST A + L
Sbjct: 59 LSDAQAQTVLAGLPLPEAGSRVV------FANGRRVEALSSLSDSI-VSTAAAEAADPLE 111
Query: 135 DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV 194
D F ++ LN + + DG+ V G G++ VS + E L I L +
Sbjct: 112 DRF--SAVLNAALVQDGLSVRVSAGTDAGMLALVSLTVGENISTHLRHRIVLEEGASLTL 169
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
V A G Y N L++V+GKG ++ H LQ SL A H+ A + Y+ +
Sbjct: 170 FDVNA-GEGRYVTNPRLDIVVGKGARLTHVKLQQDSLTAGHLAIVAASVDGNGNYDSFTL 228
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
+ G +L+RH V + + ++ ++ + DL S + P RQ K +++
Sbjct: 229 NNGSELARHEVVAKLTAAHAQVHVNGIQIVDGSRLNDLTSMIHHAAPDCGSRQTVKTVLS 288
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
S GQ VF G + V+R AQ+TD Q+ ++LLL +A +N KP L+I ADDVKCSHGA +
Sbjct: 289 ES-GQGVFQGKILVDRIAQKTDGYQMNQALLLSEKAQINSKPELEIYADDVKCSHGATVG 347
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
L++ QLFY ++RGI AR LV +F + ++ ++R+
Sbjct: 348 ALDDEQLFYLRSRGIPEAEARDILVRAFLLDALDLVTDETLRD 390
>gi|254431578|ref|ZP_05045281.1| ABC transporter, membrane component [Cyanobium sp. PCC 7001]
gi|197626031|gb|EDY38590.1| ABC transporter, membrane component [Cyanobium sp. PCC 7001]
Length = 376
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 167/355 (47%), Gaps = 28/355 (7%)
Query: 84 LLSTPWPSRKDEPFRFTDTSMIKSSQ-------IQPITRPSSSLDVSTDAQFPSLVLIDG 136
L P PSR+ E +RFTD ++S Q P T P V+ + +DG
Sbjct: 21 LAGAPLPSRRQEDWRFTDLRTLRSLQPRLGDAAAAPWTAPELPQGVALLPPEDVVNQLDG 80
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN---GMGAPDLG 193
+ + L + P + G+ V + RVS + + L W+ G+ A L
Sbjct: 81 CLAATGC-LDHWPVRLNRGARPSV---LALRVSGDAAPLE---LPWNAGSGAGLQARRLL 133
Query: 194 VIYVPA---------EGNDCYWANSVLEVVIGKGGKVRHSYLQ-NQSLNAAHIKWTAVRQ 243
++ G+ + V+EV +G G ++ L A+ + AVRQ
Sbjct: 134 LVLEAGASLDLLQVIRGSGPQALSLVVEVEMGSGSRLTLGTLAPGGDGQASLLTHVAVRQ 193
Query: 244 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 303
+ S LV + G L R + Q + T L L+ DQ D HS++ D P G
Sbjct: 194 ASGSSLSLVTATAGWALLRQEPRIVQADGEASTTLRGLQLVKGDQIADTHSQVRFDGPAG 253
Query: 304 YCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
QLHK VA G ++F+G V+V R AQQT+A QL+R+LLL RA V+ KP L+I+AD
Sbjct: 254 RLDQLHKA-VADERGHSIFNGAVQVPRAAQQTNASQLSRNLLLSDRARVDTKPELEIVAD 312
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQ 418
DVKC+HGA ++ L+ QLFY Q+RGI A L F EV+ P + +Q
Sbjct: 313 DVKCAHGATVTRLQREQLFYLQSRGIAAAQAAALLQRGFCEEVLRDLPAAAHAHQ 367
>gi|209963826|ref|YP_002296741.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
gi|209957292|gb|ACI97928.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
Length = 439
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 128/230 (55%), Gaps = 5/230 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ ++N V E+V+G G ++ H +Q +SL+ H+ T + Y+ ++ G L
Sbjct: 211 GSATCFSNIVAEIVLGAGARLHHYKIQRESLSTIHLATTTAHVGRDATYDTFILNLGAAL 270
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
SRH G T +S + + Q D+ + L+DH PRG R++ K ++
Sbjct: 271 SRHEGRSVLEGTGTTCRISGAYAVRGTQHTDITT--LIDHAKPRGTSREVVKGVI-DGQA 327
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+AVF G + V AQ+TD QL R+LLL +A ++ KP L+I ADDVKCSHGA +L++
Sbjct: 328 RAVFQGKIIVRPDAQKTDGYQLNRALLLSDQAEIDSKPELEIYADDVKCSHGATAGELDD 387
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+QLFY ++RG+ LE AR L+ +F E +E P ++R + V +G
Sbjct: 388 AQLFYLRSRGLPLERARALLIAAFLDEALEEIPVEAVREHFKAAVHGWLG 437
>gi|224823958|ref|ZP_03697066.1| FeS assembly protein SufD [Pseudogulbenkiania ferrooxidans 2002]
gi|224603377|gb|EEG09552.1| FeS assembly protein SufD [Pseudogulbenkiania ferrooxidans 2002]
Length = 438
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 193/420 (45%), Gaps = 55/420 (13%)
Query: 53 AESLEDSLPSSSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
A+ D+ +++LP LP L++ R++ +P+ + E +++T + I+ S+
Sbjct: 5 ADFYRDAFARVATTLPGSELPWLRRGREAGLAFFAEAGFPTLRQEDWKYTSVAAIEKSRF 64
Query: 111 QPITRPSSS------LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL------- 157
P P+++ +D A LV ++G Q N+ LP GV + SL
Sbjct: 65 MPPP-PTANGVAPGLIDAWGLAGTQRLVFVNGRYQPRWSNIDPLPGGVTLASLAEVLERD 123
Query: 158 -------LGV-----------------SDGIMKRVSDFIS-EFQCGDLFWSIN-GMGAPD 191
LGV SDG+ ++ ++ E LF + G+
Sbjct: 124 PQRLEGVLGVLPAGYPSGFAALNQAFFSDGVYLDLAAGVALETPVHLLFVTTEAGLALHT 183
Query: 192 LGVIYVPAEGNDC------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 239
V+ A C Y +N+ ++V+G+ +V H LQ +SL A H+
Sbjct: 184 RNVVRAEAGSRACLIEHHVALGDGAYLSNTATDLVVGQDAEVEHLKLQQESLKAFHVAAL 243
Query: 240 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 299
V Q+ S + + GG L+R ++ V L ++ Q D H+R+
Sbjct: 244 DVDQQQGSRFVSRSFALGGGLARVDIRVGLNAEHAACTLDGLYMTDGRQHSDHHTRIDHA 303
Query: 300 HPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQ 359
P G R+ +K ++A + +AVF+G V V AQ +DA Q R+LLL A ++ KP L+
Sbjct: 304 RPYGTSREFYKGVLAGA-SRAVFNGRVIVQADAQHSDAYQANRNLLLSDNAEIDTKPQLE 362
Query: 360 IIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
I ADDVKCSHGA + L+ Q+FY ++RG+ +R L F+F AE+I R +R ++
Sbjct: 363 IYADDVKCSHGATVGQLDPEQVFYLRSRGVGEVDSRTLLTFAFAAEMIGRVDMAPLRARL 422
>gi|33864857|ref|NP_896416.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
gi|33632380|emb|CAE06836.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
Length = 392
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 171/369 (46%), Gaps = 64/369 (17%)
Query: 90 PSRKDEPFRFTDTSMIK-------SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA 142
P+R+ EP+R TD ++ S+ + P+ P +S V +++DG Q
Sbjct: 23 PTRRQEPWRLTDLKRLEALARLPLSAVVAPLALPPASAGVHR-------LVLDG--QGDP 73
Query: 143 LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD----------------LFWSING 186
L+ LP+G+ V S + + + + +CG L + G
Sbjct: 74 LDGVALPEGLSVLSAVELEQALGHTLD------RCGCAGSWPVELNHASARQVLALRVRG 127
Query: 187 MGAPDLGVIYVPAEG-----------------------NDCYWANS-VLEVVIGKGGKVR 222
AP L ++ A G +D A+S VLEV +G+ ++R
Sbjct: 128 AVAP-LELVLTGAAGLTATRIVLLVEEKASLDLLQVLQSDGASAHSHVLEVHLGQEAQLR 186
Query: 223 HSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFH 282
H L A+ + AV QE S Y V G L+R V Q+ TEL
Sbjct: 187 HGLLATADGQASLLAHLAVEQEPRSRYAFTSVVQGWDLARVEPRVVQVDGQATTELKGLA 246
Query: 283 LLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTR 342
+ +DQ H+ + D P G QL KC+ A A+F+G ++V R AQ+T+A QL+R
Sbjct: 247 VSQADQQLATHTAVRFDGPEGELDQLQKCL-AGGRSHAIFNGAIQVPRDAQRTNAAQLSR 305
Query: 343 SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSF 402
+LLL RA V+ KP L+I+ADDV+C+HGA +S L+E +LFY Q+RGI A L+
Sbjct: 306 NLLLSERARVDTKPELEIVADDVRCAHGATVSQLQEDELFYLQSRGIAAADAAALLLRGA 365
Query: 403 GAEVIERFP 411
EVIE P
Sbjct: 366 CQEVIEHLP 374
>gi|148261257|ref|YP_001235384.1| FeS assembly protein SufD [Acidiphilium cryptum JF-5]
gi|326404671|ref|YP_004284753.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
gi|146402938|gb|ABQ31465.1| Iron-regulated ABC transporter permease protein SufD [Acidiphilium
cryptum JF-5]
gi|325051533|dbj|BAJ81871.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
Length = 399
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 168/352 (47%), Gaps = 40/352 (11%)
Query: 89 WPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTD-AQFPSLVLIDGFIQNS----- 141
WP+++DE + +TD + ++ + P + +++V+ + + P +V ++G +
Sbjct: 33 WPTKRDEAWHYTDLAAGLRGFALGP----APAVEVAAELPEGPRVVFVNGRFDAARSAAP 88
Query: 142 --------------------ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLF 181
ALN + DGV + G G + V+ G+
Sbjct: 89 DWVSQLGDAAADPARGGVVVALNTALAEDGVAITLAPGQQGGTLFLVALAAGR---GETM 145
Query: 182 WSING-----MGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
+I +GA + A G Y V EV +G G ++ H LQ++S A H+
Sbjct: 146 PAIAPRHRIVLGAGATLTLIETARGEGSYLHAPVFEVDLGAGARLNHYRLQDESAEAVHV 205
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
+GYE ++ G +LSR+ H + GP + L++ LL Q D+ + +
Sbjct: 206 ATIFAEIAGGAGYESFTLNRGARLSRNETHARLTGPAADVHLNAAQLLAGTQHGDVTTVV 265
Query: 297 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
D P RQ K ++A + + VF G ++V+R AQ+TD Q+ ++LLL A ++ KP
Sbjct: 266 RHDAPDCASRQTVKSVLAGA-ARGVFQGRIEVDRIAQKTDGYQMNQALLLSDEAEIDSKP 324
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
L+I ADDVKCSHGA I L+ QLFY ++RG+ A+ L+ +F E +E
Sbjct: 325 ELEIFADDVKCSHGATIGALDPEQLFYLRSRGVPAAEAKSILIRAFLDEALE 376
>gi|357405358|ref|YP_004917282.1| FeS assembly protein SufD [Methylomicrobium alcaliphilum 20Z]
gi|351718023|emb|CCE23688.1| FeS assembly protein SufD [Methylomicrobium alcaliphilum 20Z]
Length = 440
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 191/418 (45%), Gaps = 57/418 (13%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR 115
+E +LP S LP L+ LR + + +PS ++E +R+T+ S I+ + +P
Sbjct: 16 IETTLPGGS--LPW---LRALRSDALKQFSGRGFPSLREEEWRYTNVSGIEKNLFEPRLE 70
Query: 116 PSSS------LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
PS + L+ A +VL+DG+ +L++LP+ V V SL + + ++
Sbjct: 71 PSDNQIDKDWLENYRLADCWQIVLVDGYYSPELSDLADLPENVTVKSLSELLEADAGQIE 130
Query: 170 DFISE--------FQCGDLFWSING--MGAPDLGVIYVPAE------------------- 200
+ + F + W G + P V+ P +
Sbjct: 131 TYFGQAVGIDEHSFVAFNTAWFTGGAFIRIPAKTVLDKPVQLLHVVTDPNRLATTRNLVI 190
Query: 201 --------------GND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 245
G D Y + S+ EV + + + +Q +S A H T V+Q
Sbjct: 191 AESMAQAQIVETYVGTDQSYLSASITEVFVEQNADLTLYKVQCESEKAYHFGGTYVKQGR 250
Query: 246 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 305
+ + + GG L+R +HV LG +E L+ +L + Q D H+R+ P G
Sbjct: 251 NARFSHHNFAFGGLLARSEIHVD-LGHASECNLNGLYLGIKRQHLDNHTRINHLEPHGIS 309
Query: 306 RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDV 365
R+++K ++ + VF G V V AQ+TD+ R+LLL A + KP L+I ADDV
Sbjct: 310 REVYKGVL-DGRARGVFQGRVVVAEDAQKTDSEMNNRNLLLSNDAEADTKPQLEIYADDV 368
Query: 366 KCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
KC+HG + L+E +FY Q+R +D ETAR L F+F E++ + S+ + V++ V
Sbjct: 369 KCAHGVTVGQLDEKSVFYLQSRCVDEETARNMLTFAFANEMVTKITQKSLHDLVLAEV 426
>gi|116626729|ref|YP_828885.1| iron ABC transporter permease [Candidatus Solibacter usitatus
Ellin6076]
gi|116229891|gb|ABJ88600.1| Iron-regulated ABC transporter permease protein SufD [Candidatus
Solibacter usitatus Ellin6076]
Length = 420
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 182/401 (45%), Gaps = 66/401 (16%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR----PSSSLDVSTD 125
P LQ LRD++ + +P+ +E +RFT+ I PI R P + +V+T
Sbjct: 22 PAWLQPLRDNAFRRFAELGFPTIHNEEWRFTN--------IAPIARTKFAPGRTGEVATK 73
Query: 126 -AQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A+ P LV +G + LP G+ G I K + + S + + F +
Sbjct: 74 LAKGPIQLVFANGHLLTRP---ETLPAGLQAGGFADDPAAIEKHLGKYASFDE--NAFVA 128
Query: 184 INGMGAPDLGVIYV--------PAE----------------------------------- 200
+N D +I V P E
Sbjct: 129 LNTAMTQDGALIRVARGAVIAEPIELFYLTSTAATPIATHPRALILIGENAQCSIVERYQ 188
Query: 201 --GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
G Y+ N+V E+V+G+G V H +Q ++L A H+ +S + ++ GG
Sbjct: 189 GAGEGAYFTNAVTEIVVGEGAVVDHYKVQQETLAAYHVSTIQAELGRSSVFASHSIALGG 248
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
L R++ + L +E L+ +++ Q D H+ + P +L+K I+
Sbjct: 249 ALVRNDANCT-LSEGSEGTLNGLYIVNGTQHVDNHTAIDHRQPHANSHELYKGIL-DGKS 306
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
AVF+G + V + AQ+TD+ Q ++L+L A V+ KP LQI+ADDV+C+HGA I L+
Sbjct: 307 HAVFNGKIFVRKDAQKTDSKQTNKNLVLSDDAVVDTKPELQILADDVRCTHGATIGQLDA 366
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY Q+RGI E AR LVF+F +V++R S+R+ +
Sbjct: 367 ESLFYLQSRGIGKEDARNLLVFAFAQDVVDRIKVQSLRDSL 407
>gi|115372504|ref|ZP_01459812.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|310819044|ref|YP_003951402.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|115370466|gb|EAU69393.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|309392116|gb|ADO69575.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
Length = 441
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 185/417 (44%), Gaps = 60/417 (14%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQ-- 127
P+ L+ LR + L +P+ + E +++TD + I S P P + + +
Sbjct: 23 PVWLRTLRQEGLERLAQAGFPTTRHEAWKYTDVAPIVSRPFVPAW-PGKRVHLEACVEQR 81
Query: 128 ---FPSLVLIDGFIQNSALNLSNLPDGVYVGSL--------------LG----------- 159
P V +DG + +L LP GV V SL LG
Sbjct: 82 ALPGPRWVFVDGLLAPELSSLEGLPPGVRVMSLREAVREEGEALEAVLGQRARAEAHPFV 141
Query: 160 ------VSDGIMKRVSDFISEFQCGDLFWSINGMGAP----------DLG-------VIY 196
+ +G+ RV+ L + ++G GA D+G V +
Sbjct: 142 ALNAALLEEGVFVRVAPGTVAQVPVQLLFLVSGDGAAQVLASPRIVVDVGANAEAALVEF 201
Query: 197 VPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 256
E + + N+V EVV+G+ ++ H LQ ++ A H+ RQ S + +
Sbjct: 202 YAGEEDGASFTNAVTEVVLGENARLHHYKLQAETEGAYHLASLHARQARDSRFASHSFAL 261
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVA 314
GG L+R+ V G E +L+ L V Q L R LDH PR R+L+K ++
Sbjct: 262 GGALARNEVSSVFGGEGGECQLNG--LYVGRGAQHLDHRTDLDHAVPRCTSRELYKGVL- 318
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ F G V V AQ TDA Q R+LLL A V+ +P L+I+ADDVKC+HGA +
Sbjct: 319 DGRSRGTFHGRVLVRPDAQHTDATQSNRNLLLSEEALVDTRPQLEILADDVKCAHGAVVG 378
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV-KNLMGTT 430
L+E LFY ++RGI A + L ++F +EV+ +R QV V + L+GT
Sbjct: 379 RLDEQALFYLRSRGIPRPEAEQLLTYAFASEVVGAVALAPLRAQVERLVAERLLGTA 435
>gi|77165946|ref|YP_344471.1| FeS assembly protein SufD [Nitrosococcus oceani ATCC 19707]
gi|254433093|ref|ZP_05046601.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
gi|76884260|gb|ABA58941.1| Iron-regulated ABC transporter permease protein SufD [Nitrosococcus
oceani ATCC 19707]
gi|207089426|gb|EDZ66697.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
Length = 446
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 185/406 (45%), Gaps = 65/406 (16%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD-----AQ 127
L++LR + +S +P K+E +++T + + S ++ + A+
Sbjct: 30 LRELRQQALARFISLGFPGLKNEDWKYTRVRALAETAFNSAVSSSVAVSLEQCQRYFLAE 89
Query: 128 FPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD-------GIMKRVSDFISEFQCG 178
P LV +DG + +LP G VG+L G G++ +D+ ++
Sbjct: 90 TPCFRLVFVDGCFAPGLSEIEDLPAGTVVGNLAGCFKQQGESLRGVLASYADYQNQ---- 145
Query: 179 DLFWSINGMGAPDLGVIYVP---------------------------------------- 198
F ++N D +Y+P
Sbjct: 146 -PFTALNTAFMADGAYLYLPPRTVLAKPVHLIFLTTGRSEAVVTHSRNLIVLEPESELTV 204
Query: 199 ----AEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
A ND Y+ N+V E+ GKG V H LQ +S + HI V+QE + +
Sbjct: 205 IEHYAGLNDAVYFTNTVTEIAAGKGANVEHIKLQEESAKSFHIATIQVQQEQDAQFLSRN 264
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
++ GG+L+R++++ G L ++L + D H+R+ P ++ +K I+
Sbjct: 265 LALGGRLARNDINSVLAGEGAGCILEGLYVLDGVRHVDNHTRVDHQQPHTTSQEFYKGIL 324
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+AVF+G V V+ +AQ+ DA Q R+LLL A V+ KP L+I ADDVKC+HGA +
Sbjct: 325 -DGKSRAVFNGKVIVHPHAQKADARQANRNLLLSEGAEVDTKPELEIYADDVKCAHGATV 383
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
L++ Q+FY ++RG++ + AR+ L ++F E++ R IR ++
Sbjct: 384 GQLDKDQIFYLRSRGMEEDAARQLLTYAFVEEIVRRIKLRPIRARI 429
>gi|33863871|ref|NP_895431.1| ABC transporter [Prochlorococcus marinus str. MIT 9313]
gi|33635454|emb|CAE21779.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9313]
Length = 416
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 117/202 (57%), Gaps = 1/202 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
++E + K H L AA + AV QE +S LV V G + RH + Q
Sbjct: 200 LVEAHLQSEAKFHHGLLAFGHPQAALLAHLAVEQEPSSDVSLVSVCQGWGVIRHEPQLIQ 259
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
L +++L + L+ ++Q D HS + + P G QLHK +VA G++VF+G V+V
Sbjct: 260 LNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHK-VVAAGHGRSVFNGVVQVP 318
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R Q+TDA QL+RSLLL RA ++ KP L+I+ADDVKC+HGA +S L+ LFY Q+RGI
Sbjct: 319 REGQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFYLQSRGI 378
Query: 390 DLETARKALVFSFGAEVIERFP 411
+ A + L+ +F EVI P
Sbjct: 379 SPDQAAQLLLRAFCDEVICMLP 400
>gi|374370072|ref|ZP_09628085.1| FeS assembly protein SufD [Cupriavidus basilensis OR16]
gi|373098374|gb|EHP39482.1| FeS assembly protein SufD [Cupriavidus basilensis OR16]
Length = 444
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 120/216 (55%), Gaps = 1/216 (0%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y+ NSV ++V + V H +Q +SL A HI + Q S + + GG L+R
Sbjct: 214 AYFTNSVTDIVAARDAHVEHHKVQQESLKAFHIAGVNMDQRHGSRFTSSAFALGGALARA 273
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 323
++ V E L ++ Q D H+R+ P+G R+ +K +++ + +AVF+
Sbjct: 274 DIQVGLNAERAECSLDGLYMTGGRQHIDHHTRVDHARPQGKSREFYKGVLSGA-SRAVFN 332
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G V V+ AQ TDA Q R+LLL +A V+ KP L+I ADDVKCSHGA + L+ Q++Y
Sbjct: 333 GKVVVHADAQHTDAHQSNRNLLLSEQAEVDTKPQLEIYADDVKCSHGATVGQLDPEQIYY 392
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+ RG+D +AR L F+F E++ R S+R ++
Sbjct: 393 LRTRGVDDASARALLTFAFAEEMVNRLGLVSLRARL 428
>gi|91790109|ref|YP_551061.1| FeS assembly protein SufD [Polaromonas sp. JS666]
gi|91699334|gb|ABE46163.1| Iron-regulated ABC transporter permease protein SufD [Polaromonas
sp. JS666]
Length = 447
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 144/284 (50%), Gaps = 9/284 (3%)
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLG-----VI 195
+ALN + + DG YV GV+ + + + G L + D G +
Sbjct: 152 AALNAAFMSDGAYVHLAAGVA--LDTPIHLLFVTTEAG-LAVQTRNLVVADAGSRASLIE 208
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+ A G Y+ N + ++V G+ ++ H LQ +SL A H+ Q+ S + +
Sbjct: 209 HHVAVGEGAYFTNVITDLVAGRDAEIEHHKLQQESLKAFHVAAVNADQQHGSRFTSRSFA 268
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
G L+R ++ V T L ++ Q D H+R+ P G R+ +K ++A
Sbjct: 269 LGAVLARIDIGVGLNAEHTTCALDGLYMTDGRQHIDHHTRIDHARPHGTSREFYKGVLAG 328
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
+ +AVF+G V V+ AQ +DA Q R+LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 329 A-SRAVFNGKVIVHADAQHSDADQTNRNLLLSDNAEVDTKPQLEIYADDVKCSHGATVGQ 387
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
L+ Q+FY ++RG+D +AR L F+F EV++R +R ++
Sbjct: 388 LDPEQIFYLRSRGVDDASARALLTFAFAEEVVDRVGIAPLRARL 431
>gi|452823290|gb|EME30302.1| ABC transporter, Fe-S cluster assembly protein SufD, transmembrane
[Galdieria sulphuraria]
Length = 540
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 184/383 (48%), Gaps = 60/383 (15%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPIT-RPSSSLDVS---TDAQFPSLVLIDGFIQNSALNL 145
P RKDE +RFT+ + ++ Q + R + L S D Q +VL+DG N+
Sbjct: 126 PGRKDELWRFTNLRNLFLTRFQTSSHRVDNQLLESLFEKDVQSQRVVLVDGVFDPFLSNI 185
Query: 146 SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG----DLFWSINGMGAPDLGVIYVPAEG 201
SN+PD +++GS+ + + + + + + G ++F +IN D+ ++++P +
Sbjct: 186 SNIPDRIFIGSVTELDVERQRWIYELTKKGETGIQETNIFGAINLASFRDITIVWIPQDV 245
Query: 202 N-------DCYWANSV-----------LEVVIGKGGKVR---------HSYLQNQSL--- 231
+ CY +N + + VV+ G V+ YL N +
Sbjct: 246 SLQDYIHLCCYSSNCLNSSFYGISHPRIVVVVEGGSHVKILQHHFGASGGYLDNFATSIS 305
Query: 232 --NAAHIKWTAVRQ---------------ETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
++A +++ V + E ++ +S+G K+ R + +G ++
Sbjct: 306 IGDSATLEYYIVNECPKDALWLGSLNAQLEQYCTFQFRFLSSGSKVGRLTMTTDLVGRES 365
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYA 332
T L + ++T D HS +DH P + QL + +VA Q VF G VK+ R A
Sbjct: 366 NTSLHGLAIANEERTLDFHS--FVDHRVPSCHSEQLQRNLVADR-SQCVFRGLVKIRREA 422
Query: 333 QQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLE 392
T A QL RS+LL RA P L+I D+V+CSHGA +S++EE +LFY +RGI
Sbjct: 423 PHTCAHQLCRSMLLSNRAQTKTMPMLEIANDEVECSHGATVSEIEEDELFYLLSRGIPEW 482
Query: 393 TARKALVFSFGAEVIERFPYPSI 415
AR LV SF E+++ FP+PSI
Sbjct: 483 DARVLLVRSFSLELLKEFPFPSI 505
>gi|390949482|ref|YP_006413241.1| Iron-regulated ABC transporter permease protein SufD [Thiocystis
violascens DSM 198]
gi|390426051|gb|AFL73116.1| Iron-regulated ABC transporter permease protein SufD [Thiocystis
violascens DSM 198]
Length = 441
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 116/223 (52%), Gaps = 1/223 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y NSVLE+ +G+ ++H +Q +S NA H+ + Q+ S Y V + G +
Sbjct: 210 GESLYCTNSVLEISLGRDAVLQHDRIQMESANAFHLTGLYLGQDANSRYRGVNIGLGARW 269
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
+R + + G E +L +L Q D H + PR R+ K I+ + G+A
Sbjct: 270 ARTELVTRFCGEQAECDLQGLYLAGDRQLMDYHLDVAHSVPRCTSRENFKGIL-YGKGRA 328
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VFDG V V R AQ++DA R+L+L A V+ KP L+I ADDVKCSHG + +E
Sbjct: 329 VFDGLVSVARDAQKSDAAMSNRNLMLSESAEVDTKPRLEINADDVKCSHGTTVGRIEPEM 388
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
LFY ++RGI AR+ L F E+I+ ++R V V
Sbjct: 389 LFYLRSRGISAPLARRMLCLGFAGEIIQTLSAEALREHVSERV 431
>gi|318040527|ref|ZP_07972483.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. CB0101]
Length = 414
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 124/219 (56%), Gaps = 3/219 (1%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
++ A+G+ + + V+E + +G ++ H + +AA + A+ QE S +L VS
Sbjct: 185 WIEAQGSGLH--SLVIEAHLARGARLSHGLVALGQADAALLAHVALEQEPESDAQLSSVS 242
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
+G L+R Q+ +T L L+ + D HS + P G QLHK + A
Sbjct: 243 SGWGLARLEPRAVQVDGSAQTTLRGLQLVDGQRIADTHSFVEFKGPEGQLDQLHKAVAAG 302
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
G++VF+G V+V R AQ+T+A QL+R+LLL RA ++ KP L+I+ADDVKC+HGA +S
Sbjct: 303 Q-GRSVFNGAVRVPRAAQRTNAAQLSRNLLLSDRARIDTKPELEIVADDVKCAHGATVSS 361
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPS 414
L+ +LFY Q+RGI + A L +F EV+ P +
Sbjct: 362 LQTDELFYLQSRGIGADQAAGLLQRAFCEEVLRELPAAA 400
>gi|300113348|ref|YP_003759923.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
gi|299539285|gb|ADJ27602.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
Length = 446
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 130/230 (56%), Gaps = 2/230 (0%)
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
+L VI A ND Y+ N+V E+V+GKG V H LQ +S + HI V+QE + +
Sbjct: 201 ELTVIEHHAGLNDAVYFTNTVTEIVVGKGASVEHIKLQEESAKSFHIATVQVQQEQDAQF 260
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 309
++ GG+L+R++++ G L + L + D H+R+ P ++ +
Sbjct: 261 LSRNLALGGRLARNDINSVLAGEGAGCILEGLYALDGVRHVDNHTRVDHQQPHTTSQEFY 320
Query: 310 KCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
K I+ +AVF+G V V+ +AQ+ DA Q R+LLL A V+ KP L+I ADDVKC+H
Sbjct: 321 KGIL-EGKSRAVFNGKVIVHPHAQKADACQANRNLLLSEGAEVDTKPELEIYADDVKCAH 379
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
GA + L++ Q+FY ++RG+ + AR+ L ++F E+ R IR ++
Sbjct: 380 GATVGQLDKDQIFYLRSRGMKEDAARQLLTYAFVEEIARRIKLRPIRTRI 429
>gi|344345304|ref|ZP_08776158.1| FeS assembly protein SufD [Marichromatium purpuratum 984]
gi|343803133|gb|EGV21045.1| FeS assembly protein SufD [Marichromatium purpuratum 984]
Length = 431
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 130/234 (55%), Gaps = 5/234 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
YV AE + + N+VLE+ + ++ H +Q+ S + H+ +RQ+ S Y+ + +
Sbjct: 195 YVGAEPSIAHATNAVLEIDLAAAARLDHECIQHDSPESFHLSTLYLRQQARSRYQGLNIG 254
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIV 313
GG+ +R +++ + GP E L +L Q D H L +DH C +L K I+
Sbjct: 255 LGGRWARTDINTRFAGPGGECVLHGLYLSGDGQLIDYH--LDVDHAVPDCTSVELFKGIL 312
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ G+AVFDG V V + AQ+TDA R+L+L RA ++ KP L+I ADDVKCSHG +
Sbjct: 313 -YGQGRAVFDGRVFVAQDAQRTDAAMSNRNLMLSERAEIDTKPQLEINADDVKCSHGTTV 371
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
++ LFY +ARGI +AR+ L F E+I R ++R ++ + V + +
Sbjct: 372 GQIDPQMLFYLRARGIPEASARRMLCLGFAEEIIGRLGDEALRAEIAALVGDRL 425
>gi|58038583|ref|YP_190547.1| ABC transporter permease [Gluconobacter oxydans 621H]
gi|58000997|gb|AAW59891.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
Length = 392
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 120/223 (53%), Gaps = 1/223 (0%)
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
+Y + G Y AN ++V+GKG +RH +Q +SL A H+ + Y+ +
Sbjct: 163 LYDVSAGEGRYIANPRFDIVVGKGATLRHVKVQRESLTATHLAIVSADVAEKGEYDSFTL 222
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
+ G L+RH V P ++ ++ + DL S + P G RQ K +++
Sbjct: 223 NQGSSLARHEAVVTLGAPHAMAHVNGVQIVDGQRLNDLTSMIHHAAPDGSSRQTVKTVLS 282
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ GQ VF G + V+R AQ+TD Q+ ++LLL +A +N KP L+I ADDVKCSHGA +
Sbjct: 283 EA-GQGVFQGKILVDRVAQKTDGYQMNQALLLSEKAQINSKPELEIYADDVKCSHGATVG 341
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
L++ QLFY ++RGI AR LV +F + ++ +R+
Sbjct: 342 ALDDEQLFYLRSRGIAEADARDMLVRAFLIDALDLVSDEGLRD 384
>gi|335043122|ref|ZP_08536149.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Methylophaga aminisulfidivorans MP]
gi|333789736|gb|EGL55618.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Methylophaga aminisulfidivorans MP]
Length = 434
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 130/230 (56%), Gaps = 6/230 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
YV N + + EV + + + H LQ++SL+ HI A +Q ++S + +S
Sbjct: 200 YVSLADNSVGLTDVISEVNLAEKAHLSHFKLQHESLSHYHIATLAGKQASSSVWHTNNIS 259
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 313
G KL+R+++H Q LG + +L+ Q D H+R+ DH P +++K ++
Sbjct: 260 LGAKLARNDIHSQLLGEQAHVTMDGLYLVAGKQHVDNHTRI--DHAVPNTTSEEIYKGVL 317
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
AVF+G V V++ AQ+TDA Q R+LLL ++ KP ++I ADDVKC HG+ +
Sbjct: 318 DGD-SHAVFNGKVIVHKDAQKTDANQSNRNLLLSRTCEIDTKPEMEIYADDVKCGHGSTV 376
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
L+E QLF+ +ARG++ +AR L ++F EV++R IR Q +S+V
Sbjct: 377 GQLDEQQLFFLRARGMNETSARSLLTYAFAVEVLQRISDMPIR-QALSNV 425
>gi|442318214|ref|YP_007358235.1| FeS assembly protein SufD [Myxococcus stipitatus DSM 14675]
gi|441485856|gb|AGC42551.1| FeS assembly protein SufD [Myxococcus stipitatus DSM 14675]
Length = 442
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 184/408 (45%), Gaps = 64/408 (15%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT--RPSSSLDVSTDAQ 127
P L +LR P+ +DE +++T+ + I P++ R ++ L + A+
Sbjct: 23 PAWLARLRQEGLAHFERLGLPTTRDEAWKYTNVAPIADGAFAPVSSVRDAAELKAAV-AR 81
Query: 128 F----PSLVLIDGF-------IQNSALNLSNLP-------DGVYVGSLLG---------- 159
P LV +DG ++ A +S P DG ++ LG
Sbjct: 82 LALPGPRLVFVDGRLAPELSSVEGLARGVSLKPLRDVWAEDGAWLAEELGQRALAAEHAF 141
Query: 160 -------VSDGIMKRVS-DFISEFQCGDLFWSINGMGAPDLG---VIYVPAEGNDCY--- 205
+ DG + R++ +SE LF + AP L V+ V EG++
Sbjct: 142 TALNAALLEDGAVLRLAPRALSETPVQLLFLTRGD--APVLASPRVLVVAGEGSEATLVE 199
Query: 206 ------------WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
+ N+V EV +G ++H +Q++ +A H+ VRQ S +
Sbjct: 200 TYASVTGGSGPTFTNAVTEVTLGDNASLKHYRVQSEGDSALHVGGLHVRQGRDSRFASHA 259
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKC 311
+ GG L+R VHV +G + L+ L V TQ L R LDH P R+L+K
Sbjct: 260 FALGGALARTEVHVALMGEGADATLNG--LYVGRGTQHLDQRTALDHAVPNCTSRELYKG 317
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
++ + F G V+V + AQ TDA Q R+LLL A + +P L+I ADDVKC+HGA
Sbjct: 318 VL-DDRARGTFHGLVRVRQDAQHTDARQQNRNLLLSEHAQADTRPQLEIFADDVKCAHGA 376
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
A+ L+ LFY ++RGI A + L ++F E++E P +R V
Sbjct: 377 AVGRLDAQALFYLRSRGIPRAEAERLLTYAFARELVEAVPEGPVRASV 424
>gi|338980845|ref|ZP_08632094.1| FeS assembly protein SufD [Acidiphilium sp. PM]
gi|338208257|gb|EGO96133.1| FeS assembly protein SufD [Acidiphilium sp. PM]
Length = 245
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 1/222 (0%)
Query: 187 MGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
+GA + A G Y V EV +G G ++ H LQ++S A H+
Sbjct: 2 LGAGATLTLIETARGEGSYLHAPVFEVDLGAGARLNHYRLQDESAEAVHVATIFAEIAGG 61
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 306
+GYE ++ G +LSR+ H + GP + L++ LL Q D+ + + D P R
Sbjct: 62 AGYESFTLNRGARLSRNETHARLTGPAADVHLNAAQLLTGTQHGDVTTVVRHDAPDCASR 121
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
Q K ++A + + VF G ++V+R AQ+TD Q+ ++LLL A ++ KP L+I ADDVK
Sbjct: 122 QTVKSVLAGA-ARGVFQGRIEVDRIAQKTDGYQMNQALLLSDEAEIDSKPELEIFADDVK 180
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
CSHGA I L+ QLFY ++RG+ A+ L+ +F E +E
Sbjct: 181 CSHGATIGALDPEQLFYLRSRGVPAAEAKSILIRAFLDEALE 222
>gi|347756366|ref|YP_004863929.1| FeS assembly protein SufD, group 1 [Candidatus Chloracidobacterium
thermophilum B]
gi|347588883|gb|AEP13412.1| FeS assembly protein SufD, group 1 [Candidatus Chloracidobacterium
thermophilum B]
Length = 440
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 172/396 (43%), Gaps = 54/396 (13%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS-------SSLDVST 124
P ++++ + T P+ +DE +R+T+ + + +P T S +
Sbjct: 27 PYGRVQEDAFATFERLGLPTVRDEAWRYTNLAPLTKRSFRPATADGLMAANLQSGIAFFD 86
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG-------------------VSDGIM 165
++ +V ++G Q + +LS LP GV + L G +SDG+
Sbjct: 87 ESATTRMVFVNGAFQAALSDLSGLPAGVEIRRLDGPAPLPEADASSFRALNLAFLSDGVT 146
Query: 166 KRVSDFISEFQCGDLFWSI-----NGMGAP------DLGVIYVPAE------------GN 202
RV+ + LF+ + M P D I E G
Sbjct: 147 IRVARGRAVAAPIGLFFVTAPTDDDRMTHPRVIIELDEAAIATVVEIHTVLCDEEGRFGT 206
Query: 203 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
Y N+V +V +G+G + H +Q + A HI V + + + GG+LSR
Sbjct: 207 HPYLTNAVTDVRLGQGANLTHIKVQTEGSAAYHIADLRVDIGRGAAFTGHAHALGGQLSR 266
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQA 320
++ + L E L L Q D H + +DH P L+K I
Sbjct: 267 QDIRARFLDEGGECRLYGLQALRGQQLADTH--VTVDHAVPNSTSEVLYKGIFDEQ-AHG 323
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VFDG V V AQQT+A ++LLL +A V+ KP L+I ADDVKC HGA + L+E +
Sbjct: 324 VFDGRVIVRHGAQQTNAVTTNKNLLLSEKARVDAKPQLEIFADDVKCGHGATVGQLDEDE 383
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+FY ++RG+ AR+ L F F EV E+ P PS++
Sbjct: 384 IFYLRSRGLTPAEARRLLTFGFAREVSEKLPVPSLK 419
>gi|414343390|ref|YP_006984911.1| ABC transporter permease [Gluconobacter oxydans H24]
gi|411028725|gb|AFW01980.1| ABC transporter permease [Gluconobacter oxydans H24]
Length = 397
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 122/223 (54%), Gaps = 1/223 (0%)
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
+Y G Y AN ++V+GKG ++ H LQ S A H+ A + Y+ +
Sbjct: 168 LYDLNAGEGRYVANPRFDIVVGKGARLTHVKLQQDSQTAGHLAIIAASVDAGGNYDSFTL 227
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
+ GG+L+RH V P + ++ ++ ++ DL S + P RQ K +++
Sbjct: 228 NHGGELARHEVVSTLNAPHAQVHVNGIQIVDGNRLNDLTSMIHHAAPDCGSRQTVKTVLS 287
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ GQ VF G + V+R AQ+TD Q+ ++LLL +A +N KP L+I ADDVKCSHGA +
Sbjct: 288 EN-GQGVFQGKILVDRIAQKTDGYQMNQALLLSEKAQINSKPELEIYADDVKCSHGATVG 346
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
L++ QLFY ++RGI AR LV +F + ++ ++R+
Sbjct: 347 ALDDEQLFYLRSRGIPEAEARDILVRAFLLDALDLVTDETLRD 389
>gi|426401808|ref|YP_007020780.1| feS assembly protein SufD [Candidatus Endolissoclinum patella L2]
gi|425858476|gb|AFX99512.1| feS assembly protein SufD [Candidatus Endolissoclinum patella L2]
Length = 431
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 116/219 (52%), Gaps = 5/219 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ Y N V E+VIGK + H LQ + +A HI A R S Y+ +STG KL
Sbjct: 193 GSGVYINNVVTELVIGKNSHISHYKLQAEDTDAFHIAMNAARCAANSIYDNFALSTGAKL 252
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 318
SR+ + G ++ +L SDQ + + +DH C +L+K ++A+
Sbjct: 253 SRNEISATLAGSHINYSINGSYLACSDQ--HMETVTFIDHVEPACVSHELYKGVLANH-A 309
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
Q VF G + V + AQQT Q+ R+LLL +N KP L+I ADDV CSHGA + +L+E
Sbjct: 310 QGVFQGKILVRKNAQQTKGYQMNRALLLSKEVEINSKPELEIYADDVTCSHGATVGELDE 369
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
Q+FY ARGI + AR +V ++ E I IR+
Sbjct: 370 EQIFYLMARGISKKRARAIMVSAYVEETINYIHNLLIRD 408
>gi|385811470|ref|YP_005847866.1| Fe-S cluster assembly protein SufD [Ignavibacterium album JCM
16511]
gi|383803518|gb|AFH50598.1| Fe-S cluster assembly protein SufD [Ignavibacterium album JCM
16511]
Length = 437
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 181/424 (42%), Gaps = 65/424 (15%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
I+ +S E SL + ++R + S P+ KDE +++T+ S I
Sbjct: 11 IENFQSFEKSLNGGKTE-----SFHRIRKDALSKFSSIKIPTIKDEEWKYTNISSIIKHN 65
Query: 110 IQPIT-RPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
+ + ++ ++ F L V I+G + L+ LPD V VGSL
Sbjct: 66 FSVVPPKKDTAPEIIGKFLFDKLEHHLLVFINGEFRKDLSRLNELPDRVKVGSLSAAIKN 125
Query: 164 ----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP--------------------- 198
++K + + +LF ++N D I VP
Sbjct: 126 NHPVLLKHFGKYAED--SNNLFTALNSAFTKDGAFILVPKGIAIEDPIHIIFLNIAGEEK 183
Query: 199 ----------AEGND--------------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 234
AE N Y +N+V E+ + + V H LQ +S A
Sbjct: 184 FATQPRNLFIAEENSQITIIEHYASDDEGIYLSNAVTEIFVCENAVVDHIKLQEESTKAF 243
Query: 235 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 294
HI V QE +S + +STG + SR+ + G E+ L+ L+ +Q D H+
Sbjct: 244 HIGRMEVDQERSSKFASHLISTGAEFSRNEFTTRFNGEGGESMLNGLFLIKDEQFFDAHT 303
Query: 295 RLLLDHPRGYCR-QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
++DH + +C H + + VF+G V V AQ+T+A Q S+LL A +N
Sbjct: 304 --MIDHAKPHCNSHEHYKGILQDKARGVFNGKVMVRPDAQKTNAFQENNSILLSDDAVMN 361
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
KP L+I ADDVKCSHGA + L+E FY + RGI E A L+ +F ++VI+
Sbjct: 362 SKPQLEIFADDVKCSHGATVGKLDEDAKFYLKTRGIGEEAATAMLIHAFASDVIKTIKIE 421
Query: 414 SIRN 417
S+R+
Sbjct: 422 SLRD 425
>gi|453331367|dbj|GAC86946.1| ABC transporter permease [Gluconobacter thailandicus NBRC 3255]
Length = 397
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 1/208 (0%)
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
+Y G Y AN ++V+GKG ++ H LQ S A H+ A + Y+ +
Sbjct: 168 LYDLNAGEGRYVANPRFDIVVGKGARLTHVKLQQDSQTAGHLAIIAASVDAGGNYDSFTL 227
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
+ GG+L+RH V P + ++ ++ ++ DL S + P RQ K +++
Sbjct: 228 NHGGELARHEVVSTLNAPHAQVHVNGIQIVDGNRLNDLTSMIHHAAPDCGSRQTVKTVLS 287
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ GQ VF G + V+R AQ+TD Q+ ++LLL +A +N KP L+I ADDVKCSHGA +
Sbjct: 288 EN-GQGVFQGKILVDRIAQKTDGYQMNQALLLSEKAQINSKPELEIYADDVKCSHGATVG 346
Query: 375 DLEESQLFYFQARGIDLETARKALVFSF 402
L++ QLFY ++RGI AR LV +F
Sbjct: 347 ALDDEQLFYLRSRGIPEAEARDILVRAF 374
>gi|116695455|ref|YP_841031.1| iron sulfur cluster assembly protein SufD [Ralstonia eutropha H16]
gi|113529954|emb|CAJ96301.1| iron sulfur cluster assembly protein (SufD),ABC-type transporter
involved in Fe-S cluster assembly,Fe-S family [Ralstonia
eutropha H16]
Length = 443
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 175/385 (45%), Gaps = 55/385 (14%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSLDVSTDAQFPSL--------VLIDGFIQ 139
+P+ + E +++T + ++ S+ + + S D + AQ +L V ++G Q
Sbjct: 44 FPTLRHEDWKYTSVAALERSRFAVALPQAGDSPDPAVAAQIEALALAGAQLMVFVNGTHQ 103
Query: 140 NSALNLSNLPDGVYVGSLLGVSDG--------IMKRVSDFISEFQCGDLFWSINGM---- 187
+ LP G+ + SL + ++ R SD+ S F ++ + +G
Sbjct: 104 PQWSRIGTLPAGIELASLAATLERAPDCLEALLLCRTSDYPSGFAALNMAFMTDGAYIRV 163
Query: 188 ----------------GAPDLG-----VIYVPAEGNDC------------YWANSVLEVV 214
A +L ++ A C Y N++ ++V
Sbjct: 164 AAGTVPEQPIHLLFLATAAELATHARNLVVAQAGSQVCIVEHHAGLDGLAYCTNTITDIV 223
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
+ +V H LQ +SL A HI + Q S + GG L+R +++V T
Sbjct: 224 AERDAQVEHHKLQQESLKAFHIAGVNLDQRQGSRCASSSFALGGALARVDINVGLNAEHT 283
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQ 334
E L ++ Q D H+R+ P R+L+K ++A + +AVF+G V V+ AQ
Sbjct: 284 ECSLDGLYMTAGRQHVDHHTRVDHASPHSKSRELYKGVLAGA-SRAVFNGKVVVHADAQH 342
Query: 335 TDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETA 394
+DA Q R+LLL +A V+ KP L+I ADDVKC HGA + L+ Q++Y ++RG+D A
Sbjct: 343 SDAHQSNRNLLLSDQAEVDTKPQLEIYADDVKCGHGATVGQLDAEQIYYLRSRGMDDAAA 402
Query: 395 RKALVFSFGAEVIERFPYPSIRNQV 419
R L F+F EV+ R +R ++
Sbjct: 403 RALLTFAFAEEVVRRLGPAPLRTRL 427
>gi|381151144|ref|ZP_09863013.1| FeS assembly protein SufD [Methylomicrobium album BG8]
gi|380883116|gb|EIC28993.1| FeS assembly protein SufD [Methylomicrobium album BG8]
Length = 440
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 186/406 (45%), Gaps = 57/406 (14%)
Query: 71 LPLQKLRDSSSQTLLSTP-WPSRKDEPFRFTDTSMIKSSQIQPI-TRPSSSLDVSTDAQF 128
LP K R + L + +PS ++E +R+T+ S I+ P+ + P+S++D + +
Sbjct: 25 LPWLKQRRHDALALFAAGGFPSLREEEWRYTNVSAIEKKLFSPLLSAPASAVDQAWIDSY 84
Query: 129 P-----SLVLIDGFIQNSALNLSNLPDGVYVGSLLG--------VSDGIMKRVSDFISEF 175
S+VL++G +L++LP+ V V S+ V + K V+D F
Sbjct: 85 RLQDAWSIVLLNGRFSAELSSLASLPNDVLVLSMADALRQYSERVEEHFGKAVADSEHGF 144
Query: 176 QCGDLFWSINGMG---------APDLGVIYVPAE-------------------------- 200
+ W +G+ A L +++V E
Sbjct: 145 VAFNTAWFSDGLFVHIPAKQVLAKPLQLLHVVTESDALATTRNLIVVDPMAQAEVVETYI 204
Query: 201 GNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
G DC Y A SV EV +G ++ LQ +S A H T V Q + + + GG
Sbjct: 205 GADCAYLAASVNEVFVGANAELALYKLQAESAKAYHFGGTYVAQARDARFAHHHYAFGGL 264
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQ--DLHSRLLLDHPRGYCRQLHKCIVAHSL 317
L+R ++H D +E L V D+ Q D H+R+ P R+L+K ++
Sbjct: 265 LARSDIHADL---DLASECILNGLYVGDKRQHIDNHTRINHLKPHATSRELYKGVL-DDR 320
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
+ VF G V V AQ+TD+ R+LLL A + KP L+I ADDVKC HG + L+
Sbjct: 321 ARGVFQGRVIVAEDAQKTDSEMNNRNLLLSNDAEADTKPQLEIYADDVKCGHGVTVGQLD 380
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
E +FY Q+RG+D ETAR L F+F E++++ + + V+ +
Sbjct: 381 EKSVFYLQSRGVDEETARNMLTFAFANEMVDKIKIRELHDLVLGEL 426
>gi|344943945|ref|ZP_08783231.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
gi|344259603|gb|EGW19876.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
Length = 440
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 188/409 (45%), Gaps = 59/409 (14%)
Query: 69 QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-ITRPSSSLDVSTDA 126
Q LP L+ LR + + +PS ++E +R+T+ S I+ P ++ + LD
Sbjct: 23 QALPWLKALRAEALMAFSAHGFPSPREEEWRYTNVSGIEKKLFSPSLSLTAGDLDSEWLK 82
Query: 127 QFP-----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK---RVSDFI--SEFQ 176
+ S+VL++G NL++LP V S++ ++D ++K +V ++ + Q
Sbjct: 83 SYQLEDTWSVVLVNGHFSAELSNLTDLPSTV---SVMSMADALVKQPDKVEKYLGTAADQ 139
Query: 177 CGDLFWSINGMGAPDLGVIYVPAE--------------GNDC------------------ 204
F + N D ++VP + G+D
Sbjct: 140 SEHSFIAFNTAWFTDGLFVHVPVKQVLNKPIQLLHIVTGSDAMATTRNIIIADEMAEAKV 199
Query: 205 ----------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
Y +V EV +G V +Q++S A H + ++Q + +
Sbjct: 200 IETFVGIDNAYLTAAVTEVFVGSNADVTLYKMQSESDKAYHFGGSYIKQARDARFTHHNF 259
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
+ GG L+R ++H L +E EL+ +L V Q D H+R+ P R+L+K ++
Sbjct: 260 AFGGLLARSDIHAD-LDHASECELNGLYLGVKRQHIDNHTRINHLKPYAISRELYKGVL- 317
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ VF G V V AQ+TD+ R+LLL A V+ KP L+I ADDVKC HG +
Sbjct: 318 DDRARGVFQGRVIVAIDAQKTDSQMNNRNLLLSDDAEVDTKPQLEIYADDVKCGHGVTVG 377
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
L+E +FY Q+R +D ETAR L F+F E++++ S+ + V+ V
Sbjct: 378 QLDEKSIFYLQSRCVDEETARNMLTFAFANEMVDKIKIRSLHDIVLEQV 426
>gi|260436196|ref|ZP_05790166.1| iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. WH 8109]
gi|260414070|gb|EEX07366.1| iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. WH 8109]
Length = 392
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 3/213 (1%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
AEG + + VLEV +G+ ++RH L ++ + AV QE S Y V G
Sbjct: 165 AEGASAH--SHVLEVHLGQEAQLRHGLLATADGASSLMAHFAVEQEPRSSYAFTSVVQGW 222
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
L R V Q+ ET L + ++Q H+ + D P G QL KC+ A
Sbjct: 223 NLGRVEPRVVQVDGQAETVLKGLAVTGAEQQLATHTAVRFDGPEGELDQLQKCL-AGGQS 281
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
A+F+G + V R AQ+T+A QL+R+LLL RA V+ KP L+I+ADDV+C+HGA +S L+
Sbjct: 282 HAIFNGAISVPRDAQRTNAAQLSRNLLLSDRARVDTKPELEIVADDVRCAHGATVSQLQA 341
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+LFY Q+RGI E A L+ EVI + P
Sbjct: 342 DELFYLQSRGIAAEDATALLLRGACQEVIAQLP 374
>gi|124005856|ref|ZP_01690694.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
gi|123988539|gb|EAY28180.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
Length = 442
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 127/219 (57%), Gaps = 7/219 (3%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G ++N+V+EVV+ ++ H +QN NA+++ T V+Q + S Y +S G +
Sbjct: 213 GGQASFSNAVMEVVVEPNARMTHYKVQNDQPNASYVGTTQVKQASDSYYANTTISLNGGV 272
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV-AHSL 317
R+N+++ G + E+ + ++L + D HS + DH P +L+K ++ S
Sbjct: 273 IRNNLNIALDGSNVESNMFGLYMLTGNTHVDNHS--VADHLKPHSLSNELYKGVLDGKST 330
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
G VF+G + V + AQ+T+A Q R++LL +++N KP L+I ADDVKCSHGA +L+
Sbjct: 331 G--VFNGKIFVRQDAQKTNAYQQNRNILLSDNSSINTKPQLEIWADDVKCSHGATTGNLD 388
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
E LFY ++RGI AR L+ +FG E++++ +R
Sbjct: 389 EEALFYLRSRGIATNEARALLIHAFGNEIVDKIELEPLR 427
>gi|352096059|ref|ZP_08957006.1| SufBD protein [Synechococcus sp. WH 8016]
gi|351677415|gb|EHA60564.1| SufBD protein [Synechococcus sp. WH 8016]
Length = 410
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 3/215 (1%)
Query: 197 VPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 256
V A+G + + +LE+ +G+ KV H L A + AV QET S Y LV VS
Sbjct: 180 VSAKGQAAH--SHLLEIHLGQESKVNHGLLALGDGGEALLANLAVEQETRSHYSLVSVSQ 237
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 316
G R V Q+ + + +D+ +H+ + + P G Q+ K I A
Sbjct: 238 GWSFGRLEPSVVQVDGQASASIHGLSVTAADEQFAVHTAVRFEGPEGTLDQVQKTIAADR 297
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
++F+G ++V R AQ+T+A QL+R+LLL RA V+ KP L+I+ADDV+C+HGA +S L
Sbjct: 298 -SHSIFNGAIQVPRPAQRTNASQLSRNLLLSGRARVDAKPELEIVADDVRCTHGATVSQL 356
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+E QLFY ++RGI +A L+ ++ EV++R P
Sbjct: 357 QEDQLFYLRSRGITQSSAATLLLRAYCKEVLDRLP 391
>gi|373459363|ref|ZP_09551130.1| FeS assembly protein SufD [Caldithrix abyssi DSM 13497]
gi|371721027|gb|EHO42798.1| FeS assembly protein SufD [Caldithrix abyssi DSM 13497]
Length = 441
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 122/217 (56%), Gaps = 5/217 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
++ N++ V + KV HS++QN++ NA H+ V+Q+ +S Y ++ GGKL R+N
Sbjct: 212 HFTNALTVVSVSNHAKVIHSHIQNENENAYHVGNVLVQQKHSSRYVSNNITLGGKLVRNN 271
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
+ + G + L+ F++ Q D H+ L++H C +L++ I+A AVF
Sbjct: 272 LKITLQGEFADASLNGFYMAHGTQHHDNHT--LIEHASPNCTSNELYQGILA-DRASAVF 328
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V R AQ+TDA Q LLL A ++ P L+I ADDVKC+HGA + L+E +F
Sbjct: 329 AGKILVERDAQKTDAVQSNNCLLLSDEAKIDTMPQLEIYADDVKCTHGATVGQLDEEAIF 388
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Y + RGI A+ L++SF +IE+ +R+ V
Sbjct: 389 YLRTRGISENRAKNLLIYSFAERIIEQIKVKPVRDYV 425
>gi|410694648|ref|YP_003625270.1| putative Protein sufD [Thiomonas sp. 3As]
gi|294341073|emb|CAZ89470.1| putative Protein sufD [Thiomonas sp. 3As]
Length = 439
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 181/418 (43%), Gaps = 53/418 (12%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD 121
S + + +P + R + + LL + P+R E +++T + + + T P++ LD
Sbjct: 14 SGAYAAAEPAWCAQARHQAREDLLRSGLPTRHTEDWKYTSLRALDAIDL-ATTAPTALLD 72
Query: 122 VST--DA------QFPSLVLIDGFIQNSALNLSNLPDGVYV---GSLL---GVSDGIMKR 167
DA P LV +DG +LS+LP GV + G+ L + G +
Sbjct: 73 GEALRDAGALLVGDGPRLVFVDGAFDAELSHLSDLPPGVSLAPWGAGLSHNATASGAVLD 132
Query: 168 VSDFISEFQCGDLFWSINGM-----------------------GAPDLGVIYVPAEGNDC 204
+ F+ + ++ +GM GA L + +G+
Sbjct: 133 AAARGGAFEAINRLFARDGMALELADGVCLAAPVVVIALQTRAGASHLRHVLRLGQGSWA 192
Query: 205 --------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 250
Y + SV + +G + H LQ++S A H+ V Q S +
Sbjct: 193 RVIEQHIGLAQMVPYLSTSVTRAELARGATLAHVRLQDESGAAVHVSQLHVAQGRDSRLD 252
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 310
+ G +LSR H+ P T+L +L +Q D+H + HPR R +
Sbjct: 253 ARLLVVGARLSRQEFHIAHEAPGCHTDLRGASVLAGEQHGDVHMCIEHRHPRSTSRTDVR 312
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
+ + VF G V V+ AQ+TDAG + R+LLL PRA + +P LQI ADDV CSHG
Sbjct: 313 GVFDDA-SHGVFTGRVNVHPGAQKTDAGMINRNLLLSPRAEADTRPQLQIDADDVLCSHG 371
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
A + L+ LFY Q+RGI AR LV +F A+ + + +R QV + + G
Sbjct: 372 ATVGQLDAEALFYLQSRGIAAPLARALLVQAFVAQALPDIGWEPLRAQVRTRLAARRG 429
>gi|148240484|ref|YP_001225871.1| SufD protein, Fe-S cluster assembly [Synechococcus sp. WH 7803]
gi|147849023|emb|CAK24574.1| SufD protein, Fe-S cluster assembly [Synechococcus sp. WH 7803]
Length = 398
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
V+EV +G+ ++RH L + S +++ + AV QE S Y+ V V G + R V Q
Sbjct: 179 VIEVHLGQEARLRHGVLASASDDSSLLAHLAVEQEPRSSYDFVSVCRGWRFGRLEPRVLQ 238
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
+ T L+ + +D+ H+ + + P G QL K + A ++F+G ++V
Sbjct: 239 VDGQATTRLTGLAMTGTDEQFATHTSVCFEGPEGSLDQLQKAVAADR-SHSIFNGAIQVP 297
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+TDA QL+R+LLL RA V+ KP L+I+ADDV+C+HGA +S L++ QLFY ++RG+
Sbjct: 298 RAAQRTDASQLSRNLLLSNRARVDAKPELEIVADDVRCAHGATVSQLQQDQLFYLRSRGV 357
Query: 390 DLETARKALVFSFGAEVIERFP 411
+ A L+ + +V++R P
Sbjct: 358 AADEAAALLLKGYCCDVVDRLP 379
>gi|372208922|ref|ZP_09496724.1| FeS assembly protein SufD [Flavobacteriaceae bacterium S85]
Length = 435
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N V EV +GK +QN NA+ + T V QE + + S GGKL+R+N+
Sbjct: 205 FNNVVTEVFVGKNAIFDLYKIQNDKENASLVDATLVAQEKDTVASVFTFSFGGKLTRNNL 264
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
Q G E+ L+ +L DQ D H+ + P + +K I VF+G
Sbjct: 265 SFFQNGTGCESNLNGVTILEGDQLVDNHTLVAHKSPDCTSNETYKGIYGGK-ATGVFNGK 323
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V++ AQ+ +A Q S+LL AT+N KP L+I ADDVKCSHG I L++S LFY Q
Sbjct: 324 VIVDQIAQRINAYQQNDSVLLSDTATINSKPQLEIFADDVKCSHGCTIGQLDKSALFYMQ 383
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
RGI + A+ L+F+F A+ +E P+++ ++ + V + +G +
Sbjct: 384 QRGIPPKEAQALLMFAFCADAVEDIKIPALKQKINTMVADKLGVS 428
>gi|119945238|ref|YP_942918.1| FeS assembly protein SufD [Psychromonas ingrahamii 37]
gi|119863842|gb|ABM03319.1| Iron-regulated ABC transporter permease protein SufD [Psychromonas
ingrahamii 37]
Length = 475
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 198/431 (45%), Gaps = 76/431 (17%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI----QPITRPSSSLDVS-TDAQ 127
L LR+S+ + + +PS KDE +++T+T ++ ++ Q I P+ SL ++ Q
Sbjct: 26 LNDLRESAIKNFAAQGFPSPKDESWKYTNTKKLQQTEYCLAQQSIIPPTDSLTAQISEQQ 85
Query: 128 FP----SLVLIDGFIQNSALNLSNLPDGVYVGS----------LLGVSDGIMKR-----V 168
F +V I+G + + LP G+ + S L+ + G M
Sbjct: 86 FCPDEHRMVFINGTYHHDLSSNPPLPKGIILSSFAQALQDHPILIASTLGEMVNHQTHPF 145
Query: 169 SDFISEFQCGDLF-WSI-NGMGAPDLGVIYV---PAEGNDCY------------------ 205
S S F LF W+ N AP + +++ A+ CY
Sbjct: 146 SALNSAFMSDGLFLWAAENSQMAPPIHCLFISTTTAKTVVCYPRLLLVLKNKTQLTLIEH 205
Query: 206 ------------------------WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 241
N+V E+ +G ++ H LQ +SLN++HI V
Sbjct: 206 YIDLCSPRSDPDMTAANGTSGNPNLINAVTEIHLGSEAQLDHYKLQRESLNSSHIAAMYV 265
Query: 242 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 301
+Q AS + S G L+R+++ V+ G E L+ +L +Q D H+++ P
Sbjct: 266 QQHQASRFTSHSYSLGAPLARYDIQVELTGSQCECCLNGVYLADDNQHVDYHTQITHLAP 325
Query: 302 RGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 361
+QL+K ++ +AVF+G V ++ AQQ++A QL +LLL V+ KP LQI
Sbjct: 326 GCSSQQLYKGVI-QGHARAVFNGKVIIHPEAQQSNAKQLNNNLLLSDNGEVDTKPELQIY 384
Query: 362 ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN---- 417
ADDV C+HGA + L+ LFY Q+RGI + A+ LV F E++ER + S+RN
Sbjct: 385 ADDVICNHGATVGQLDTQALFYLQSRGISEKDAQACLVDGFVGELLERINHLSLRNFIQL 444
Query: 418 QVVSHVKNLMG 428
+ + +K L+G
Sbjct: 445 SISAQLKQLVG 455
>gi|357031718|ref|ZP_09093661.1| ABC transporter permease protein [Gluconobacter morbifer G707]
gi|356414948|gb|EHH68592.1| ABC transporter permease protein [Gluconobacter morbifer G707]
Length = 387
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 119/217 (54%), Gaps = 1/217 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y AN L++ +G G ++RH LQ +S +A H+ +V Y+ ++ GG L
Sbjct: 164 GEGSYVANPRLDISVGAGARLRHVKLQRESTDATHLAILSVDVAEKGEYDSFVLNQGGLL 223
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
+RH V GP ++ + ++ DL S + P RQ K +++ + GQ
Sbjct: 224 ARHEVGATLEGPHAFVHVNGVQTVDGNRLNDLTSMIHHAAPDCGSRQTVKTVLSDA-GQG 282
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G + V+R AQ+TD Q+ ++LLL +A +N KP L+I ADDV+CSHGA + L+E Q
Sbjct: 283 VFQGKILVDRIAQKTDGYQMNQALLLSEKAQINSKPELEIYADDVRCSHGATVGALDEEQ 342
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
LFY ++RGI AR LV +F + ++ +R+
Sbjct: 343 LFYLRSRGIPDSQARDLLVQAFLVDALDLVADADMRD 379
>gi|420258414|ref|ZP_14761148.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|404514140|gb|EKA27941.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 443
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQ---NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G+ ++ H L QS + AH R A Y + G L+
Sbjct: 217 HFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGLT 273
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 274 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTIVRER-GK 330
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 331 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 390
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AE+ E + SIR V++ +
Sbjct: 391 QLFYLQSRGINQADAQQMIIFAFAAELTEAIHHASIRKVVLARI 434
>gi|332161646|ref|YP_004298223.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325665876|gb|ADZ42520.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 437
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQ---NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G+ ++ H L QS + AH R A Y + G L+
Sbjct: 211 HFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGLT 267
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G+
Sbjct: 268 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTMVRER-GK 324
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I ++
Sbjct: 325 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATIGRIDAE 384
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AE+ E + SIR V++ +
Sbjct: 385 QLFYLQSRGINQADAQQMIIFAFAAELTEAIHHASIRKVVLARI 428
>gi|87301371|ref|ZP_01084212.1| ABC transporter, membrane component [Synechococcus sp. WH 5701]
gi|87284339|gb|EAQ76292.1| ABC transporter, membrane component [Synechococcus sp. WH 5701]
Length = 417
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 109/197 (55%), Gaps = 1/197 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
V+E +G+ +RH L A + AV QE S E V S G LSR V Q
Sbjct: 201 VIEAHLGRESTLRHGLLALGEGPACFLGQLAVEQEPRSQLESVWASHGWALSRFEPRVVQ 260
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
+ + T L + L Q D HSR+ P G QLHK I A G++VF+G VKV
Sbjct: 261 VDGEATTSLKALQLADGQQLADTHSRVEFRGPEGQLDQLHKAI-ADDRGRSVFNGAVKVP 319
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+T+A QL+R+LLL +A ++ KP L+I+ADDV+C+HGA +S L+ +LFY Q+RG+
Sbjct: 320 RAAQRTNASQLSRNLLLSNQARIDTKPELEIVADDVRCAHGATVSRLQTDELFYLQSRGL 379
Query: 390 DLETARKALVFSFGAEV 406
A L F EV
Sbjct: 380 SAAVAAGLLKRGFCEEV 396
>gi|344339048|ref|ZP_08769978.1| FeS assembly protein SufD [Thiocapsa marina 5811]
gi|343800968|gb|EGV18912.1| FeS assembly protein SufD [Thiocapsa marina 5811]
Length = 441
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 121/232 (52%), Gaps = 5/232 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y NSVLE+ +G+ ++H +Q +S NA HI + Q+ S Y V V G
Sbjct: 210 GESLYCTNSVLELSLGRDAVLKHDRIQIESPNAFHITGLYLSQDAGSRYVGVNVGLGAAW 269
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 318
+R ++ + G E +L +L Q D H + +DH C R+ K I+ + G
Sbjct: 270 ARTDLVTRFRGEHAECDLQGLYLAGDRQLMDYH--IDVDHAVPSCSSRETFKGIL-YGKG 326
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+AVFDG V V + AQ+TDA ++L+L A ++ KP L+I ADDVKCSHG + +E
Sbjct: 327 RAVFDGRVVVAKDAQKTDAAMSNKNLMLSQNAEIDTKPQLEINADDVKCSHGTTVGQIEP 386
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
+LFY ++RGI AR+ L F E+I+ ++R V V + T
Sbjct: 387 EKLFYLRSRGISAPLARRMLCMGFAEEIIDALQSDALREVVSEEVGRRLETA 438
>gi|386308264|ref|YP_006004320.1| iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
subsp. palearctica Y11]
gi|418243364|ref|ZP_12869846.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433549697|ref|ZP_20505741.1| Iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
IP 10393]
gi|318605862|emb|CBY27360.1| iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
subsp. palearctica Y11]
gi|351777159|gb|EHB19397.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431788832|emb|CCO68781.1| Iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
IP 10393]
Length = 437
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQ---NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G+ ++ H L QS + AH R A Y + G L+
Sbjct: 211 HFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGLT 267
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G+
Sbjct: 268 RHNTSAQLNGEGATLSINSLLLPIGSEICD--TRTYLEHNKGYCESRQLHKTMVRER-GK 324
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 325 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 384
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AE+ E + SIR V++ +
Sbjct: 385 QLFYLQSRGINQADAQQMIIFAFAAELTEAIHHASIRKVVLARI 428
>gi|122089391|emb|CAL12239.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 388
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQ---NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G+ ++ H L QS + AH R A Y + G L+
Sbjct: 162 HFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGLT 218
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G+
Sbjct: 219 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTMV-RERGK 275
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 276 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 335
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AE+ E + SIR V++ +
Sbjct: 336 QLFYLQSRGINQADAQQMIIFAFAAELTEAIHHASIRKVVLARI 379
>gi|285005770|ref|YP_001006409.2| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 443
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQ---NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G+ ++ H L QS + AH R A Y + G L+
Sbjct: 217 HFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGLT 273
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G+
Sbjct: 274 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTMVRER-GK 330
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 331 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 390
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AE+ E + SIR V++ +
Sbjct: 391 QLFYLQSRGINQADAQQMIIFAFAAELTEAIHHASIRKVVLARI 434
>gi|83593903|ref|YP_427655.1| FeS assembly protein SufD [Rhodospirillum rubrum ATCC 11170]
gi|386350652|ref|YP_006048900.1| FeS assembly protein SufD [Rhodospirillum rubrum F11]
gi|83576817|gb|ABC23368.1| FeS assembly protein SufD [Rhodospirillum rubrum ATCC 11170]
gi|346719088|gb|AEO49103.1| FeS assembly protein SufD [Rhodospirillum rubrum F11]
Length = 447
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 126/222 (56%), Gaps = 5/222 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
++N V E+ +G+G ++ H L + + + + T V +GYE + GG+L+R+ +
Sbjct: 217 FSNGVSEISLGEGAQLSHYRLIDGAADGYLVGTTLVEVGVRAGYESFTLELGGRLTRNEI 276
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFD 323
V G + + +S + + + Q D + +L+DH P RQL K ++ + G+AVF
Sbjct: 277 RVTLAGEEGQARVSGGYAVRAGQHLD--NTVLIDHAQPGATSRQLFKGVLDET-GKAVFQ 333
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V R AQ+TD QL ++LLL A V+ KP L+I ADDV C HGA +++ QLFY
Sbjct: 334 GKILVRRGAQKTDGQQLHKALLLSRGAEVDTKPELEIYADDVVCGHGATAGEMDADQLFY 393
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
QARG+D TAR LV +F +V+ +R +++ V++
Sbjct: 394 LQARGLDEATARALLVEAFLEDVVGEVGDLPVRAAMIAKVRD 435
>gi|350553961|ref|ZP_08923110.1| FeS assembly protein SufD [Thiorhodospira sibirica ATCC 700588]
gi|349789269|gb|EGZ43233.1| FeS assembly protein SufD [Thiorhodospira sibirica ATCC 700588]
Length = 437
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 170/384 (44%), Gaps = 54/384 (14%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRP----SSSLDVSTDAQFPS--LVLIDGFIQNSA 142
+P + E +++T +K+ + ++ L+ T PS LV +DG Q +
Sbjct: 41 YPDPRHEEWKYTKLRTLKNQSFVTASHAPMLDAADLERCTWPDLPSHRLVFVDGIYQPAL 100
Query: 143 LNLSNLPDGVYVGSL--------LGVSDGIMKRVSDFISEFQCGDLFWSING---MGAPD 191
+LP GV + SL +G+ + V S F +L +G APD
Sbjct: 101 SEPGDLPAGVQITSLAQAIAAGAVGLETVLGTLVDAQYSSFAAWNLAQLFDGALIQLAPD 160
Query: 192 LGV-----------------IYVP------AEGNDCY-------------WANSVLEVVI 215
+ IY P +G+ + + NS E+ +
Sbjct: 161 TCLQQPVHLLFIHSAQPTPQIYHPHSVIQAGQGSKAHILEHHIGLPGAQGFCNSATEIHL 220
Query: 216 GKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTE 275
+ H+ LQ S + HI +R + S ++ GG+L+RH+++V P E
Sbjct: 221 SANATLEHTLLQEHSEASYHIGNLFIRAQRDSRLISHNINLGGRLTRHDLNVDLCEPGAE 280
Query: 276 TELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQT 335
L+ ++ Q D H+R+ P + + I A G+ VF G V V R AQ+
Sbjct: 281 AVLNGLFVVGGTQHTDTHTRIHHRAPHTRSDETYHGI-ADDQGRGVFKGRVLVARDAQKI 339
Query: 336 DAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETAR 395
+A Q +LLL +A ++ KP L+I ADDV+CSHGA I L+ ++Y Q+RGID E AR
Sbjct: 340 EAHQHNANLLLSDKAEIDTKPELEIYADDVRCSHGATIGQLDPQSMYYLQSRGIDREKAR 399
Query: 396 KALVFSFGAEVIERFPYPSIRNQV 419
L+F+F EVI+R P + +
Sbjct: 400 DMLIFAFADEVIQRLPLAPLAKHI 423
>gi|444919520|ref|ZP_21239535.1| Iron-sulfur cluster assembly protein SufD [Cystobacter fuscus DSM
2262]
gi|444708362|gb|ELW49433.1| Iron-sulfur cluster assembly protein SufD [Cystobacter fuscus DSM
2262]
Length = 441
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 188/426 (44%), Gaps = 62/426 (14%)
Query: 48 FVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
+ + LAE + + + P L+ LR + L +P+ ++E +++T+ S +
Sbjct: 8 YYLDLAERFQAERAAGA-----PAWLRALRQDGIEQLARQGFPTSRNEDWKYTNVSSVSC 62
Query: 108 SQIQPI-TRPSSSLDVSTDAQF-----PSLVLIDG-FIQN--------SALNLSNLPDGV 152
P+ T +S++ + + Q P LV +DG F++ L + +L + +
Sbjct: 63 QSFCPVHTVHEASMEAAVELQRLPGPGPRLVFVDGRFVRELSRLDGLPEGLQVRSLREAL 122
Query: 153 YVGSLLGVSDGIMKRVS------------------DFISEFQCGD---LFWSINGMGAPD 191
G+ L G R D C + L + G+
Sbjct: 123 EEGAPLEELVGQRARAESSAFTALNVALLEEGAWVDVAPGTVCAEPVQLLFLARGVATLS 182
Query: 192 LGV--IYVPAEGN------DCY--------WANSVLEVVIGKGGKVRHSYLQNQSLNAAH 235
L + V A N + Y + N+V EVV+G G +V H LQ +S A H
Sbjct: 183 LASPRVVVRAGANSELTLVESYVGVAPGVSFTNAVTEVVLGDGARVTHLKLQAESEVAFH 242
Query: 236 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 295
I V Q S + +S GG L+R+ VH L D E + L V TQ L
Sbjct: 243 IGSLHVEQGRDSRFASHVLSLGGALARNEVHA--LFKDRGGEATLNGLYVGHGTQHLDQW 300
Query: 296 LLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
LDH + C R+L+K ++ + + F G V V AQ TDA Q R+LLL A+
Sbjct: 301 TNLDHAQPDCTSRELYKGVLDDN-ARGTFHGKVMVRPDAQHTDARQNNRNLLLSETASAE 359
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
+P L+I+ADDVKC+HGA + L+E LFY ++RGI A + L +F EV+ P
Sbjct: 360 ARPQLEILADDVKCAHGATVGRLDEQALFYLRSRGIPRGEAERLLTLAFATEVVSAIPLA 419
Query: 414 SIRNQV 419
S+R QV
Sbjct: 420 SLRTQV 425
>gi|398791540|ref|ZP_10552264.1| FeS assembly protein SufD [Pantoea sp. YR343]
gi|398215031|gb|EJN01598.1| FeS assembly protein SufD [Pantoea sp. YR343]
Length = 425
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 116/211 (54%), Gaps = 5/211 (2%)
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
+ K++H L +S A H V + G LSRHN Q G +T
Sbjct: 209 VADNAKLQHIKLSFESEKAYHFAHNDVVMGRDANVATTSFLLGAGLSRHNTSAQLNGENT 268
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYA 332
++S L V+ + D +R L+H +GYC RQ+HK ++A G+AVF+G +KV ++A
Sbjct: 269 NLAINSLSLPVNQEVCD--TRSYLEHNKGYCTSRQMHK-VIARDKGRAVFNGMIKVAQHA 325
Query: 333 QQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLE 392
+TD +LLL A V+ KP L+I ADDVKCSHGA I ++E Q+FY ++RGID
Sbjct: 326 LKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIGRIDEEQMFYLRSRGIDET 385
Query: 393 TARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
A++ ++ +F AE+ E P +R V+ +
Sbjct: 386 AAQRMIIHAFAAELTETLENPVLRQVVLQRI 416
>gi|340776231|ref|ZP_08696174.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter aceti NBRC
14818]
Length = 433
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 119/225 (52%), Gaps = 5/225 (2%)
Query: 186 GMGAPDLGVIYVPA-EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 244
G GA L VI + A E Y N VL I + + H +Q ++ NA H+
Sbjct: 182 GEGA-SLSVIEIAASENAGAYLHNPVLSCAIAEKAHLTHVKIQQEAENAVHLATVYADIA 240
Query: 245 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 304
+ Y+ + G L+RH VH G ++ LL + Q D+ S + P
Sbjct: 241 VRAAYDSFTLGLGSVLARHEVHATMHGNHAAVHVNGAQLLAASQVGDITSVIAHAAPDCI 300
Query: 305 CRQLHKCIVA-HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
RQ + +++ HS +AVF G V V R AQ+TD Q+ ++LLL P A +N KP L+I AD
Sbjct: 301 SRQTVRNVLSDHS--RAVFQGKVLVERVAQKTDGYQMNQALLLSPSAEINAKPELEIYAD 358
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
DVKCSHGA + L++ QLFY ++RGI + AR+ LV +F E ++
Sbjct: 359 DVKCSHGATVGALDDDQLFYLRSRGIPDDQARQMLVEAFLVEAVD 403
>gi|436835812|ref|YP_007321028.1| FeS assembly protein SufD [Fibrella aestuarina BUZ 2]
gi|384067225|emb|CCH00435.1| FeS assembly protein SufD [Fibrella aestuarina BUZ 2]
Length = 439
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ + N V EVV+ +V H +QN S HI T V Q S Y ++ G
Sbjct: 212 GDKAAFTNIVTEVVVAADARVEHYRVQNDSQQTNHICRTQVSQADNSHYYNATITLNGGF 271
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
R+++++ G E + + L + + TQ + + L+DH P Y +L+K I+ + G
Sbjct: 272 VRNDLNIVLNGEHCEAFM--YGLYMPNGTQHIDNHTLVDHAMPNSYSNELYKGIL-NDKG 328
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
VF+G + V AQ+T+A Q ++++L P A++N KP L+I ADDVKCSHG L E
Sbjct: 329 TGVFNGKIYVRPDAQKTNAYQSCKNVVLSPEASMNTKPQLEIYADDVKCSHGTTTGKLNE 388
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
LFY Q+RGI E AR L+++F EV+ IR
Sbjct: 389 EALFYLQSRGIPKEAARTLLLYAFAEEVVRNIKIKPIR 426
>gi|448241978|ref|YP_007406031.1| FeS cluster assembly protein of SufBCD complex [Serratia marcescens
WW4]
gi|445212342|gb|AGE18012.1| FeS cluster assembly protein of SufBCD complex [Serratia marcescens
WW4]
gi|453065549|gb|EMF06510.1| FeS assembly protein SufD [Serratia marcescens VGH107]
Length = 428
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RHN Q G ++S L V + D +R L+H +GYC RQLHK +V+
Sbjct: 254 GAGLTRHNTSAQLNGEGANLVINSLVLPVGKEICD--TRTYLEHNKGYCESRQLHKTVVS 311
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 312 -DRGKAVFNGMIKVAKHAIKTDGQMTNHNLLLGKVAEVDTKPQLEIYADDVKCSHGATVG 370
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY Q+RGID A++ ++F+F AE+ E +IR +V++ +
Sbjct: 371 RIDEEQLFYLQSRGIDKHAAQQMIIFAFAAELTEGIANDTIRERVLARI 419
>gi|381404716|ref|ZP_09929400.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea sp. Sc1]
gi|380737915|gb|EIB98978.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea sp. Sc1]
Length = 426
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 5/233 (2%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
+ ++ S IG K+ H+ L +S N+ H + + G LS
Sbjct: 197 DQAHFTGSRFTCAIGDNAKLTHTKLAFESSNSYHFAHNDLVVGNDAQVSSTSFLLGAGLS 256
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++ ++S L V + D +R L+H +G+C RQ+HK IV G+
Sbjct: 257 RHNTSTQLNGENSTLAINSLVLPVKQEVAD--TRTYLEHNKGHCVSRQMHKTIVRDK-GR 313
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G++KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I +++
Sbjct: 314 AVFNGHIKVAQHALKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDE 373
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
Q+FY ++RGI+ + A+ ++ +F AE+ E P +R V+ + DV
Sbjct: 374 QMFYLRSRGIEQDAAQTMIIHAFAAELTETLENPVMRQAVLQRIAQRFPGGDV 426
>gi|397666278|ref|YP_006507815.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
gi|395129689|emb|CCD07922.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
Length = 428
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 181/389 (46%), Gaps = 54/389 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-SMIKSSQIQPITRPSSSLDVS-TDAQFPS 130
L +L+ + L + +P+R DE +++T S+++ + P +L + D+ +
Sbjct: 22 LAQLQSKALTDLKHSGFPTRYDEEWKYTLVDSLLQQHFVPPDPAVKPALKTAFDDSPVKN 81
Query: 131 LVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISE----------- 174
L LI +GFI + NLP+GV + +L+ +D + + + +
Sbjct: 82 LFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYADLVKPYLGKIVEQEHGFHYLNTAM 141
Query: 175 FQCGDLFWSINGMGAPDLGVI-----------YV------------------PAEGNDCY 205
QCG + G+ + V+ Y+ E N CY
Sbjct: 142 LQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLRHLILMEKESQATLIEEYHGEENICY 201
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS + +S GGKL R ++
Sbjct: 202 FTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSSHSLSLGGKLVRSDI 261
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIV-AHSLGQAVF 322
V + ++ + Q D H+ ++ H CR Q +K I+ HS +AVF
Sbjct: 262 SVSMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDYKGILKGHS--RAVF 317
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G V V + AQ TDA Q ++LLL A ++ KP L+I ADDV CSHGA + L+E +F
Sbjct: 318 NGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIF 377
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFP 411
Y RGI + A L+ +F + + P
Sbjct: 378 YLATRGISRDEASHYLIQAFANDNLRLIP 406
>gi|307609399|emb|CBW98888.1| hypothetical protein LPW_06751 [Legionella pneumophila 130b]
Length = 428
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 181/400 (45%), Gaps = 56/400 (14%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSS 119
+ S + Q L +L+ + L +P+R DE +++T + P +P+
Sbjct: 12 AQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALK 71
Query: 120 LDVSTDAQFPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISE 174
V D+ +L LI +GFI + NLP+GV + +L+ +D + + + +
Sbjct: 72 -TVFDDSPVKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYADLVKPYLGKIVEQ 130
Query: 175 -----------FQCGDLFWSINGMGAPDLGVI-----------YV--------------- 197
QCG + G+ + V+ Y+
Sbjct: 131 EHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLRHLILMEKESQATLI 190
Query: 198 ---PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS + +
Sbjct: 191 EEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSSHSL 250
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCI 312
S GGKL R ++ V + ++ + Q D H+ ++ H CR Q +K I
Sbjct: 251 SLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDYKGI 308
Query: 313 V-AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
+ HS +AVF+G V V + AQ TDA Q ++LLL A ++ KP L+I ADDV CSHGA
Sbjct: 309 LTGHS--RAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGA 366
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+ L+E +FY RGI + A L+ +F + + P
Sbjct: 367 TVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIP 406
>gi|116071398|ref|ZP_01468667.1| ABC transporter, membrane component [Synechococcus sp. BL107]
gi|116066803|gb|EAU72560.1| ABC transporter, membrane component [Synechococcus sp. BL107]
Length = 396
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 168/374 (44%), Gaps = 40/374 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
L ++ + L+ P+RK E +R T+ +++ PI+ +++ D +
Sbjct: 10 LAPVQQRGQEALVRLGLPTRKHEAWRLTNLGRLEAVARMPISSVATASDAPPRLDDVVRL 69
Query: 133 LIDGFIQNSALNLSNLPDGVY------VGSLLGVSDGIMKRVSDFISEFQCGD----LFW 182
++DG N L LP+G+ + LG + D++ EF L
Sbjct: 70 VLDGV--NDPLEGVTLPEGLTPLEPKELELALGHTLDRCGWSDDWLIEFNHASAQQLLAL 127
Query: 183 SINGMGAP------------------------DLGVIYV-PAEGNDCYWANSVLEVVIGK 217
+ GM P L ++ V A G + + +LEV +G+
Sbjct: 128 RVRGMVPPVEITMAAASGLIPTRVLLVVEEKAQLELLQVFSARGEAAH--SHLLEVHLGQ 185
Query: 218 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 277
++ H L A+ AV QE S Y V G L R V Q+ T
Sbjct: 186 EAQLNHGVLACADGVASLFAQLAVEQEPRSAYSFTSVVQGWSLGRIEPRVVQVDGQASTT 245
Query: 278 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDA 337
L + ++Q +H+ + + P G QL KC+ A +F+G + V R AQ+T+A
Sbjct: 246 LKGLAVADAEQQLAVHTSVCFEGPDGELEQLQKCLAA-GRSHTIFNGAINVPRKAQRTNA 304
Query: 338 GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKA 397
QL+R+LLL RA V+ KP L+I+ADDV+C+HGA +S L+E +LFY ++RGI A
Sbjct: 305 AQLSRNLLLSDRARVDTKPELEIVADDVRCAHGATVSQLQEDELFYLRSRGIGASDAAAL 364
Query: 398 LVFSFGAEVIERFP 411
L+ EV+E+ P
Sbjct: 365 LLRGACQEVVEKLP 378
>gi|78213790|ref|YP_382569.1| Iron-regulated ABC transporter permease SufD [Synechococcus sp.
CC9605]
gi|78198249|gb|ABB36014.1| ABC transporter, membrane component [Synechococcus sp. CC9605]
Length = 392
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 3/213 (1%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
AEG + + VLEV +G+ ++RH L ++ + AV QE S Y L V G
Sbjct: 165 AEGASAH--SHVLEVHLGQEAQLRHGVLATADGVSSLMAHLAVEQEPRSSYALTSVVQGW 222
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
L R V Q+ ET L + + Q H+ + D P G QL KC+ A
Sbjct: 223 NLGRVEPRVVQVDGQAETVLKGLAVTGAKQQLATHTAVRFDGPEGELDQLQKCL-AGGQS 281
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
A+F+G + V R AQ+T+A QL+R+LLL RA V+ KP L+I+ADDV+C+HGA +S L++
Sbjct: 282 HAIFNGAISVPRDAQRTNAAQLSRNLLLSGRARVDTKPELEIVADDVRCAHGATVSQLQD 341
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+LFY Q+RGI A L+ EVI + P
Sbjct: 342 DELFYLQSRGIAAADATALLLRGACQEVIAQLP 374
>gi|365859211|ref|ZP_09399085.1| FeS assembly protein SufD [Acetobacteraceae bacterium AT-5844]
gi|363712921|gb|EHL96588.1| FeS assembly protein SufD [Acetobacteraceae bacterium AT-5844]
Length = 424
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 159/356 (44%), Gaps = 49/356 (13%)
Query: 89 WPSRKDEPFRFTDTSMI-KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQN------- 140
+P+RK E + FTD M+ +S+ + +T S+++ V +DG +
Sbjct: 47 FPTRKIEAWHFTDLGMMARSAFTEALTPVDGSVELPASHASRRAVFVDGRFREDLSETPV 106
Query: 141 -------------------------SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
+ALN DG + G G + + +S
Sbjct: 107 QSLGANLSAAEGLLGSVARVDDVPLAALNTMLFEDGALIDLPAGEDGGTI----ELLSII 162
Query: 176 QCGDLFWSIN-------GMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQN 228
+ D +++ G GA + + G Y N V+E+V+ +G + H+ +Q
Sbjct: 163 EANDRPIAVHPRHVIRLGKGATLVLIERAIGRGEGRYLHNPVVEIVLEEGAHLTHARIQQ 222
Query: 229 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 288
+ + + + + Y+ + G K SR HV GP L+ LL Q
Sbjct: 223 EGKDGIFLSTVFAKAAAGATYDSFLLHAGAKFSRSEAHVSLDGPKAMAHLNGAQLLSDGQ 282
Query: 289 TQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLL 346
D + LDH C RQ K ++A + VF G + V++ AQ+TD Q+ ++LLL
Sbjct: 283 FGDCTT--FLDHAAPDCASRQTVKTVLAGK-SRGVFQGKIHVHQVAQRTDGYQMNQALLL 339
Query: 347 EPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSF 402
+A +N KP L+I ADDVKCSHGA + +L+E+QLFY Q RGI TAR L+ +F
Sbjct: 340 SDQAEINSKPQLEIYADDVKCSHGATVGELDENQLFYLQTRGIPQATARSMLIEAF 395
>gi|238765285|ref|ZP_04626213.1| hypothetical protein ykris0001_43340 [Yersinia kristensenii ATCC
33638]
gi|238696508|gb|EEP89297.1| hypothetical protein ykris0001_43340 [Yersinia kristensenii ATCC
33638]
Length = 420
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 121/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L V +G ++ H L QS + AH R A Y + G L+
Sbjct: 194 HFTGARLTVSVGDNAELNHCKLAFEAPQSTHFAHNDLVLGRDARAKSYSFL---LGAGLT 250
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 251 RHNTSAQLNGEGASLSMNSLLLPIGREICD--TRTYLEHNKGYCDSRQLHKTIV-RERGK 307
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 308 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDTE 367
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AE+ E +IR V++ +
Sbjct: 368 QLFYLQSRGINQADAQQMIIFAFAAELTEAINNKAIRKVVLARI 411
>gi|88807205|ref|ZP_01122717.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
gi|88788419|gb|EAR19574.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
Length = 398
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 125/218 (57%), Gaps = 4/218 (1%)
Query: 197 VPAEGNDCY--WANS-VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
+PAE ++ A+S V+EV +G+ ++RH L + S + + + AV QE S Y+ V
Sbjct: 163 IPAERDNAAAPLAHSHVIEVHLGQEARLRHGLLASASGDTSLLAHLAVEQEPRSSYDFVS 222
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
V G + R V Q+ T L+ + D+ H+ + P G QL K +
Sbjct: 223 VCRGWRFGRLEPRVLQVDGQATTRLNGLAMTGGDEQFATHTGVCFQGPEGSLDQLQKAVA 282
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
A ++F+G ++V R AQ+TDA QL+R+LLL +A V+ KP L+I+ADDV+C+HGA +
Sbjct: 283 ADR-SHSIFNGAIQVPRAAQRTDASQLSRNLLLSSQARVDAKPELEIVADDVRCAHGATV 341
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
S L++ QLFY ++RG+ + A L+ + +V++R P
Sbjct: 342 SQLQQDQLFYLRSRGVAADEAAALLLKGYCCDVVDRLP 379
>gi|238782566|ref|ZP_04626597.1| hypothetical protein yberc0001_22160 [Yersinia bercovieri ATCC
43970]
gi|238716493|gb|EEQ08474.1| hypothetical protein yberc0001_22160 [Yersinia bercovieri ATCC
43970]
Length = 428
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 11/229 (4%)
Query: 205 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H ++ QS + AH R A Y + G L+
Sbjct: 202 HFTGARLTISLGDNAELSHYKLAFETPQSYHFAHNDLVLSRDARARSYSFL---LGAGLT 258
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 259 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTIVRER-GK 315
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 316 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 375
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
QLFY Q+RGI+ A++ ++F+F AE+ E +IR V++ + + +
Sbjct: 376 QLFYLQSRGINQADAQQMIIFAFAAELTEAIHSETIRKVVLARIADRLA 424
>gi|238787123|ref|ZP_04630923.1| hypothetical protein yfred0001_6090 [Yersinia frederiksenii ATCC
33641]
gi|238724911|gb|EEQ16551.1| hypothetical protein yfred0001_6090 [Yersinia frederiksenii ATCC
33641]
Length = 428
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQ---NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H L QS + AH R A Y + G L+
Sbjct: 202 HFTGARLTIAVGDNAELSHCKLAFETTQSYHFAHNDLVLERDARARSYSFL---LGAGLT 258
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 259 RHNTSAQLNGEGATLAINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTIVRER-GK 315
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 316 AIFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 375
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AE+ E +IR V++ +
Sbjct: 376 QLFYLQSRGINHADAQQMIIFAFAAELTEAIHDETIRKIVLARI 419
>gi|87125294|ref|ZP_01081140.1| ABC transporter, membrane component [Synechococcus sp. RS9917]
gi|86167063|gb|EAQ68324.1| ABC transporter, membrane component [Synechococcus sp. RS9917]
Length = 388
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
+LEV +G+ +RH + + + + AV QE S Y L V G +R V Q
Sbjct: 170 LLEVHLGQEATLRHGLIACADGHPSLLVHCAVEQEPRSSYSLTSVVKGWTFARLEPRVVQ 229
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
+ T L + DQ HS + + P G QLHKC+ A A+F+G ++V
Sbjct: 230 VDGAASTTLRGLAVTSGDQQLATHSAVRFNGPDGGLDQLHKCL-AGGRSHAIFNGAIQVP 288
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+TDA QL+R+LL+ RA ++ KP L+I+ADDV+C+HGA +S L++ +LFY Q+RGI
Sbjct: 289 REAQRTDAAQLSRNLLVSDRARIDTKPELEIVADDVRCAHGATVSQLQDDELFYLQSRGI 348
Query: 390 DLETARKALVFSFGAEVIERFP 411
A L+ + EV+++ P
Sbjct: 349 AAADAAGLLLRGYCQEVVDQLP 370
>gi|52840840|ref|YP_094639.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54296623|ref|YP_122992.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
gi|52627951|gb|AAU26692.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750408|emb|CAH11802.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
Length = 428
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 181/389 (46%), Gaps = 54/389 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-SMIKSSQIQPITRPSSSLDVS-TDAQFPS 130
L +L+ + L +P+R DE +++T S+++ + P +L + D+ +
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVPPDPTVKPALKTAFDDSPVKN 81
Query: 131 LVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSD-------GIMKRVSDF----ISE 174
L LI +GFI + NLP GV + +L+ +D IM++ F +
Sbjct: 82 LFLIQNGFISQEQEWIKNLPQGVLILPLSLALIHYADLVKPHLGKIMEQEHGFHYLNTAM 141
Query: 175 FQCGDLFWSINGMGAPDLGVI-----------YV------------------PAEGNDCY 205
QCG + G+ + V+ Y+ E N CY
Sbjct: 142 LQCGVFIYIPEGICLEEPIVLKHIQDQTNQAMYLRHLILMEKESQATLIEEYHGEENICY 201
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS + +S GGKL R ++
Sbjct: 202 FTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSSHSLSLGGKLVRSDI 261
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIV-AHSLGQAVF 322
V + ++ + Q D H+ ++ H CR Q +K I+ HS +AVF
Sbjct: 262 SVSMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDYKGILKGHS--RAVF 317
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G V V + AQ TDA Q ++LLL A ++ KP L+I ADDV CSHGA + L+E +F
Sbjct: 318 NGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIF 377
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFP 411
Y RGI + A L+ +F + + P
Sbjct: 378 YLATRGISRDEASHYLIQAFANDNLRLIP 406
>gi|419957355|ref|ZP_14473421.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae GS1]
gi|388607513|gb|EIM36717.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae GS1]
Length = 423
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E P ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALPDGGLKQQVLARI 414
>gi|148360747|ref|YP_001251954.1| ABC transporter permease [Legionella pneumophila str. Corby]
gi|296106188|ref|YP_003617888.1| ABC transporter permease [Legionella pneumophila 2300/99 Alcoy]
gi|148282520|gb|ABQ56608.1| ABC transporter, permease component [Legionella pneumophila str.
Corby]
gi|295648089|gb|ADG23936.1| ABC transporter, permease component [Legionella pneumophila 2300/99
Alcoy]
Length = 428
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 178/389 (45%), Gaps = 54/389 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-SMIKSSQIQPITRPSSSLDVS-TDAQFPS 130
L +L+ + L +P+R DE +++T S+++ + P +L + D+ +
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFDDSPVKN 81
Query: 131 LVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISE----------- 174
L LI +GFI + NLP+GV + +L+ +D + + + +
Sbjct: 82 LFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYADLVKPYLGKIVEQEHGFHYLNTAM 141
Query: 175 FQCGDLFWSINGMGAPDLGVIY-----------------------------VPAEGNDCY 205
QCG + G+ + V+ E N CY
Sbjct: 142 LQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMHLRHLILMEKESQATLIEEYQGEENICY 201
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS + +S GGKL R ++
Sbjct: 202 FTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSSHSLSLGGKLVRSDI 261
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIV-AHSLGQAVF 322
V + ++ + Q D H+ ++ H CR Q +K I+ HS +AVF
Sbjct: 262 SVSMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDYKGILKGHS--RAVF 317
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G V V + AQ TDA Q ++LLL A ++ KP L+I ADDV CSHGA + L+E +F
Sbjct: 318 NGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIF 377
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFP 411
Y RGI + A L+ +F + + P
Sbjct: 378 YLATRGISRDEASHYLIQAFANDNLRLIP 406
>gi|295096073|emb|CBK85163.1| Iron-regulated ABC transporter permease protein SufD [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 423
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E P ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALPDGGLKQQVLARI 414
>gi|378776542|ref|YP_005184979.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|364507356|gb|AEW50880.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 428
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 181/400 (45%), Gaps = 56/400 (14%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSS 119
+ S + Q L +L+ + L +P+R DE +++T + P +P+
Sbjct: 12 AQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALK 71
Query: 120 LDVSTDAQFPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISE 174
V D+ +L LI +GFI + NLP+GV + +L+ +D + + + +
Sbjct: 72 A-VFYDSPVKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYADLVKPYLGKIVEQ 130
Query: 175 -----------FQCGDLFWSINGMGAPDLGVI-----------YV--------------- 197
QCG + G+ + V+ Y+
Sbjct: 131 EHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLRHLILMEKESQATLI 190
Query: 198 ---PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
E N CY+ NS+ EV +G G K+ H +Q +S +A H+ ++RQ AS + +
Sbjct: 191 EEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSIRQSAASQFSSHSL 250
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCI 312
S GGKL R ++ V + ++ + Q D H+ ++ H CR Q +K I
Sbjct: 251 SLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDYKGI 308
Query: 313 V-AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
+ HS +AVF+G V V + AQ TDA Q ++LLL A V+ KP L+I ADDV CSHGA
Sbjct: 309 LTGHS--RAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEVDTKPQLEIFADDVLCSHGA 366
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+ L+E +FY RGI + A L+ +F + + P
Sbjct: 367 TVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIP 406
>gi|377575887|ref|ZP_09804871.1| iron-sulfur cluster assembly protein SufD [Escherichia hermannii
NBRC 105704]
gi|377541919|dbj|GAB50036.1| iron-sulfur cluster assembly protein SufD [Escherichia hermannii
NBRC 105704]
Length = 423
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RH+ + G + L+S L V+++ D SR L+H +GYC RQLHK ++A
Sbjct: 250 GGAVLRHHTSTRLEGENITLRLNSLALPVNNEVCD--SRTWLEHNKGYCNSRQLHK-VIA 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL + V+ KP L+I ADDVKCSHGA +
Sbjct: 307 RDRGKAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLSEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
++E Q+FY ++RGID A K +VF+F AE+ E +++ QV++ ++ +G
Sbjct: 367 RIDEEQMFYLRSRGIDQRAAEKMIVFAFAAELTESVTDAALKQQVLARIEARLG 420
>gi|372220666|ref|ZP_09499087.1| FeS assembly protein SufD [Mesoflavibacter zeaxanthinifaciens S86]
Length = 438
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 196/434 (45%), Gaps = 58/434 (13%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + + P+ ++R + + + +PS+K+E +++T I+
Sbjct: 1 MELKDKLISSFLAFENQVDLDHPVHEVRSEAIKNFEAKGFPSKKEEAWKYTSLKSIEKVD 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ +++L+ +F +V +DG + +S L+ DGV V +
Sbjct: 61 FSIFPKETNALEYKDVKKFFLHEIDTYKIVFVDG-VYSSYLS-ETTHDGVDVCLMSAAFS 118
Query: 163 GIMKR--VSDFISEFQCGDL-FWSINGMGAPDLGVIYVP--------------AEGNDC- 204
M + + + ++ D ++N + + IY+P A GN+
Sbjct: 119 KPMYKEVIEKYFNKVASKDESLTTLNTAFSREGAYIYIPKSKAPRKPIQILHLATGNEAA 178
Query: 205 ------------------------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAA 234
+ N+V E+ K +V + +QN + A+
Sbjct: 179 LMLQPRNLIVVEENAEVQIIERHQSLTTNEVFTNAVTEIFAAKDARVDYYKVQNDAPTAS 238
Query: 235 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 294
+ T + Q+T S + S GGKL+R+N++ Q G ++ L +L Q D ++
Sbjct: 239 LVDNTYIDQKTNSQVRVHTFSFGGKLTRNNLNYYQNGEHIDSTLKGVTILGEKQHVDHYT 298
Query: 295 RLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNV 354
+ P Q +K I S VF+G + V++ AQ+T+A Q ++L+ +ATVN
Sbjct: 299 LVHHAQPNCESHQDYKGIYGDS-STGVFNGKIIVDKIAQKTNAFQQNNNILISDKATVNT 357
Query: 355 KPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPS 414
KP L+I ADDVKCSHG I L+E LFY Q+RGI + AR ++++F V+E P
Sbjct: 358 KPQLEIFADDVKCSHGCTIGQLDEDALFYLQSRGIPKKEARALMMYAFANNVLESVRIPE 417
Query: 415 IRNQVVSHVKNLMG 428
++ ++ + + +G
Sbjct: 418 LKVRINKLIASKLG 431
>gi|325286420|ref|YP_004262210.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
gi|324321874|gb|ADY29339.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
Length = 455
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 191/433 (44%), Gaps = 64/433 (14%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ +R + + + +PS+K+E +++T + ++
Sbjct: 20 LKDKLVSSFLAFENNVDVHNPVHDVRTEAIKNFETKGFPSKKEEAWKYTSLNSLQKIDFS 79
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLP-DGVYVGSL-LGVSD 162
+ SSL+ ++ +V +DG + NLS DGV + + ++
Sbjct: 80 IFPKKESSLEYKDVKKYFIHQIDTYKIVFVDGVYSS---NLSETTHDGVDICLMSAALTK 136
Query: 163 GIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVP--------------AEGNDC-- 204
+ K V D F D ++N + + IY+P + GND
Sbjct: 137 PMYKAVIDVYFNKVASKDDSLTTLNTAFSREGAYIYIPKNKVPKKPIEIIHFSTGNDAAL 196
Query: 205 -----------------------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 235
N V E+ K V + +QN +A+
Sbjct: 197 MLQPRNLIIAEENSEMQIIERHQSLTSNEVLTNCVTEIFAAKNAIVDYYKVQNDVDSASL 256
Query: 236 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 295
I T V Q+ S ++ S GGKL R+N++ Q G ++ + ++ Q D H+
Sbjct: 257 IDNTYVDQKDGSHVKVHTFSFGGKLMRNNLNFYQNGERIDSTMKGITIIGDKQHVDHHTL 316
Query: 296 LLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVK 355
+ P Q +K I A S VF+G + V++ AQ+T+A Q ++L+ +AT+N K
Sbjct: 317 VHHIEPNCESHQDYKGIYADS-ATGVFNGKIIVDKIAQKTNAFQQNNNILISDKATINTK 375
Query: 356 PNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
P L+I ADDVKCSHG I L+E LFY Q+RGI + AR L+++F V+E P +
Sbjct: 376 PQLEIFADDVKCSHGCTIGQLDEEALFYLQSRGIPKKEARALLMYAFANNVLESVRIPEL 435
Query: 416 RNQVVSHVKNLMG 428
+ ++ + N +G
Sbjct: 436 KVRINKLIANKLG 448
>gi|397663169|ref|YP_006504707.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
gi|395126580|emb|CCD04763.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
Length = 428
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 183/399 (45%), Gaps = 54/399 (13%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-SMIKSSQIQPITRPSSSLD 121
+ S + Q L +L+ + L +P+R DE +++T S+++ + P +L
Sbjct: 12 AQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALK 71
Query: 122 VS-TDAQFPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISE- 174
+ D+ +L LI +GFI + NLP GV + +L+ +D + + + +
Sbjct: 72 TAFDDSPVKNLFLIQNGFISQEQEWIKNLPQGVLILPLSLALIHYADLVKPHLGKIVEQE 131
Query: 175 ----------FQCGDLFWSINGMGAPDLGV-----------IYV---------------- 197
QCG + G+ + V +Y+
Sbjct: 132 HGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAVYLRHLILMEKESQATLIE 191
Query: 198 --PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS + +S
Sbjct: 192 EYHGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSSHSLS 251
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIV 313
GGKL R ++ V + ++ + Q D H+ ++ H CR Q +K I+
Sbjct: 252 LGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDYKGIL 309
Query: 314 -AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
HS +AVF+G V V + AQ TDA Q ++LLL A ++ KP L+I ADDV CSHGA
Sbjct: 310 KGHS--RAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGAT 367
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+ L+E +FY RGI + A L+ +F + + P
Sbjct: 368 VGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIP 406
>gi|238749442|ref|ZP_04610947.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
gi|238712097|gb|EEQ04310.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
Length = 407
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 125/232 (53%), Gaps = 11/232 (4%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGG 258
++ ++ + L + +G ++ H L + S + AH R A Y + G
Sbjct: 178 DEAHFTGARLTLAVGDNAELNHCKLAFETPHSYHFAHNDLVLSRDARARSYSFL---LGA 234
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHS 316
L+RHN Q G ++S L V + D +R L+H +GYC RQLHK IV
Sbjct: 235 GLTRHNTSAQLNGEGATLSINSLLLPVGREICD--TRTYLEHNKGYCESRQLHKTIVRER 292
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
G+A+F+G +KV ++A +TD +LLL A ++ KP L+I ADDVKCSHGA + +
Sbjct: 293 -GKAIFNGMIKVAQHALKTDGQMTNNNLLLSKLAEIDTKPQLEIYADDVKCSHGATVGRI 351
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+ QLFY Q+RGI A++ ++F+F AE+ E + +IR +++ + + +
Sbjct: 352 DAEQLFYLQSRGISQPDAQQMIIFAFAAELTEAIHHENIRKVILARIADRLA 403
>gi|163786784|ref|ZP_02181232.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
gi|159878644|gb|EDP72700.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
Length = 437
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 125/227 (55%), Gaps = 2/227 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +QN + NA+ I T V Q+ S ++ S GGKL R+N++
Sbjct: 211 NSVTEIFTNKRAIVDYYKIQNDNENASLIDNTYVNQKQESLAKVHTFSFGGKLIRNNLNF 270
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
Q G ++ + ++ + Q D ++ + P Q +K I VF+G V
Sbjct: 271 YQNGERIDSTMKGITIIGNKQHVDHNTLVHHIEPNCESHQDYKGIFDDG-ATGVFNGKVV 329
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++L+ +A++N KP L+I ADDVKCSHG I L+ES +FY ++R
Sbjct: 330 VEKEAQKTNAFQANNNILISDKASINTKPQLEIFADDVKCSHGCTIGQLDESAMFYLRSR 389
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDVSF 434
GI + AR L+F+F V++ P I+N++ + N +G D+ F
Sbjct: 390 GIPEKEARALLMFAFSNNVLDSVKIPEIKNRITKIIANKLG-VDIGF 435
>gi|54293586|ref|YP_126001.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
gi|53753418|emb|CAH14871.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
Length = 428
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 180/389 (46%), Gaps = 54/389 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-SMIKSSQIQPITRPSSSLDVS-TDAQFPS 130
L +L+ + L +P+R DE +++T S+++ + P +L + D+ +
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFDDSPVKN 81
Query: 131 LVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISE----------- 174
L LI +GFI + NLP+GV + +L+ +D + + + +
Sbjct: 82 LFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYADLVKPYLGKIVEQEHGFHYLNTAM 141
Query: 175 FQCGDLFWSINGMGAPDLGVI-----------YV------------------PAEGNDCY 205
QCG + G+ + V+ Y+ E N CY
Sbjct: 142 LQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLRHLILMEKESQATLIEEYQGEENICY 201
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS + +S GGKL R ++
Sbjct: 202 FTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSSHSLSLGGKLVRSDI 261
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIV-AHSLGQAVF 322
V + ++ + Q D H+ ++ H CR Q +K I+ HS +AVF
Sbjct: 262 SVFMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDYKGILTGHS--RAVF 317
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G V V + AQ TDA Q ++LLL A ++ KP L+I ADDV CSHGA + L+E +F
Sbjct: 318 NGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIF 377
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFP 411
Y RGI + A L+ +F + + P
Sbjct: 378 YLATRGISRDEASHYLIQAFANDNLRLIP 406
>gi|336172315|ref|YP_004579453.1| FeS assembly protein SufD [Lacinutrix sp. 5H-3-7-4]
gi|334726887|gb|AEH01025.1| FeS assembly protein SufD [Lacinutrix sp. 5H-3-7-4]
Length = 437
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 193/434 (44%), Gaps = 59/434 (13%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + +++ P+ +R + +T +T +PS+K+E +++T I
Sbjct: 1 MDLKEKLVSSFLAFENTIDVESPVHDIRTEAIKTFETTGFPSKKEEAWKYTSLKNILKED 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLP-DGVYVGSLLGVS 161
+ ++L+ D ++ IDG + +LS++ DG+ V +
Sbjct: 61 YSVFPKQENALEYKDIKKYFIHDIDTYKIIFIDG---KYSSHLSHVTHDGIDVCLMSSAL 117
Query: 162 DGIMKR--VSDFISEFQCGDLFWSINGMGAPDLGVIYVP--------------AEGNDC- 204
+ R + ++ ++ D ++N + + I++P + GN+
Sbjct: 118 NKPKYRPVIENYFNKIATKDSLSALNTAFSNEGAYIHIPKNKLVEKPIQIIHFSTGNEAA 177
Query: 205 ------------------------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAA 234
NSV E+ K V + +QN + NA+
Sbjct: 178 LMLQPRNLIVVDENSHVQIIERHQSLTENPVLTNSVTEIYGNKRAIVDYYKIQNDNKNAS 237
Query: 235 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 294
I T V Q+ S + S GGKL R+N++ Q G ++ + ++ Q D ++
Sbjct: 238 LIDNTYVDQKEQSHCLVHTFSFGGKLIRNNLNFYQNGERIDSTMKGITIIGDKQHVDHNT 297
Query: 295 RLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNV 354
+ P Q +K I + + VF+G V V + AQ+T+A Q ++LL +AT+N
Sbjct: 298 LVHHIEPNCESHQDYKGIFSDN-ATGVFNGKVVVEKEAQKTNAFQANNNILLSDKATINT 356
Query: 355 KPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPS 414
KP L+I ADDVKCSHG I L+ES LFY + RGI + AR L+F+F V++ P
Sbjct: 357 KPQLEIFADDVKCSHGCTIGQLDESALFYMKQRGIPEKEARALLMFAFSNNVLDSVKIPE 416
Query: 415 IRNQVVSHVKNLMG 428
++ ++ + N +G
Sbjct: 417 LKQRITKLIANKLG 430
>gi|238791666|ref|ZP_04635303.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
gi|238728770|gb|EEQ20287.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
Length = 428
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H L QS + AH R A Y + G L+
Sbjct: 202 HFTGARLTIAVGDNAELHHCKLAFEAPQSYHFAHNDLLLSRDSRARSYSFL---LGAGLT 258
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 259 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRSYLEHNKGYCESRQLHKTIVRER-GK 315
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 316 AIFNGMIKVAKHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 375
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AE+ E +IR V++ +
Sbjct: 376 QLFYLQSRGINQADAQQMIIFAFAAELTEAIHSDAIRKVVLARI 419
>gi|344202783|ref|YP_004787926.1| FeS assembly protein SufD [Muricauda ruestringensis DSM 13258]
gi|343954705|gb|AEM70504.1| FeS assembly protein SufD [Muricauda ruestringensis DSM 13258]
Length = 440
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 123/228 (53%), Gaps = 2/228 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
GN+ + NSV E+ GK V + +QN A+ + T + Q+ +S + S GGKL
Sbjct: 208 GNEVF-TNSVTEIFAGKDAIVDYYKVQNDESTASLVDNTYISQKNSSVVRVHTFSLGGKL 266
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
R+N++ Q G ++ L +L Q D H+ + P Q +K I
Sbjct: 267 IRNNLNFYQNGERIDSTLKGITILGDKQHVDHHTLVHHAQPNCESHQDYKGIFGDG-STG 325
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+G + V++ AQ+TDA Q ++LL ++T+N KP L+I ADDVKCSHG I L+E
Sbjct: 326 VFNGKIVVDKIAQKTDAFQQNNNILLSDKSTINSKPQLEIFADDVKCSHGCTIGQLDEEA 385
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
LFY ++RGI + A+ L+++F V+E P ++ ++ + N +G
Sbjct: 386 LFYLRSRGIPKKEAKALLMYAFANNVLESVRIPELKARINKIIANKLG 433
>gi|326334712|ref|ZP_08200919.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693162|gb|EGD35094.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 433
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 182/416 (43%), Gaps = 64/416 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P++K E + +T + ++++ QP+ + ++ L
Sbjct: 21 LKDIRKEAFSFFAEKGFPNKKVEAWEYTSLTELQATDYHLWQPVNKKTTLLPEVLYKYAI 80
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCGDL 180
A LV ++G+ +S ++ L GV V SLL + + K FI ++ + GD+
Sbjct: 81 ADCYQLVFVNGYY-SSEMSSKELT-GVTVTSLL---EALHKGGEAFIQKYFNANTEKGDI 135
Query: 181 FWSINGMGAPDLGVIYVPAEG-----------ND-----CY------------------- 205
F +IN A + I VP ND CY
Sbjct: 136 FTAINTAFASEGVYIEVPKGKVVEKPIQLLYFNDRKETTCYQPRNIIVVGENAQLKVIEM 195
Query: 206 -----------WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
N+V EV + K + + LQN SL A+ I T + QE S +
Sbjct: 196 HQNLSDAATAILTNAVTEVFVAKNAFLDYYKLQNDSLTASLIDNTYISQEANSHANVHTF 255
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
S GG L+R+N++ G E+ L +L Q D ++ + HP Q +K IV
Sbjct: 256 SFGGTLTRNNLNFYHQGEYLESTLKGLSILKGTQHTDHYTLVNHAHPNCESHQDYKSIVN 315
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
VF+G + V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG +
Sbjct: 316 EE-ATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVG 374
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
L LFY Q RGI + A L ++F V+E P++ + + + +G T
Sbjct: 375 SLSADSLFYLQTRGIGKKEAAALLTYAFANTVLESVKIPALSEYINAIIAEKLGVT 430
>gi|339322817|ref|YP_004681711.1| iron sulfur cluster assembly protein SufD [Cupriavidus necator N-1]
gi|338169425|gb|AEI80479.1| iron sulfur cluster assembly protein SufD [Cupriavidus necator N-1]
Length = 447
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 175/407 (42%), Gaps = 63/407 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSLDVSTDAQFPSL 131
L R + + +P+ + E +++T + ++ S+ + + LD + AQ +L
Sbjct: 28 LAHARRQALEYFAQAGFPTLRQEDWKYTSVAALERSRFAVALPQGGDGLDGAVAAQIEAL 87
Query: 132 --------VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG--------IMKRVSDFISEF 175
V ++G Q + LP G + SL + +++R S++ S F
Sbjct: 88 ALAGAHLMVFVNGVHQPQWSRIGALPAGTELASLAATLERAPDCLEALLVRRTSEYPSGF 147
Query: 176 QCGDLFWSINGMGAPDLGVIYVPA------------------------------------ 199
G F ++N D I V A
Sbjct: 148 ASG--FAALNMALMTDGAYIRVAAGTVPEQPIHLLFLATAGELATHARNLVVAQAGSQVC 205
Query: 200 -----EGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
G D Y N++ ++V + +V H LQ +SL A HI + Q S
Sbjct: 206 IVEHHAGLDGLAYCTNTITDIVAERDAQVEHHKLQQESLKAFHIAGVNLDQRHGSRVASS 265
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 312
+ G L+R ++ V T+ L ++ Q D H+R+ P R+ +K +
Sbjct: 266 SFALGAALARVDIEVGLNAEHTDCSLDGLYMTGGRQHIDHHTRIDHASPHSKSREFYKGV 325
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+A + +AVF+G V V+ AQ +DA Q R+LLL A V+ KP L+I ADDVKCSHGA
Sbjct: 326 LAGA-SRAVFNGKVVVHADAQHSDAHQSNRNLLLSDNAEVDTKPQLEIYADDVKCSHGAT 384
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+ L+ Q++Y ++RG+D AR L F+F EV+ R +R ++
Sbjct: 385 VGQLDPEQIYYLRSRGMDDAEARALLTFAFAEEVVRRLGPAPLRTRL 431
>gi|291617270|ref|YP_003520012.1| SufD [Pantoea ananatis LMG 20103]
gi|291152300|gb|ADD76884.1| SufD [Pantoea ananatis LMG 20103]
Length = 425
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 127/229 (55%), Gaps = 15/229 (6%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELVEVST 256
+ ++ + + ++RH+ L +S + H + Q T++ + L
Sbjct: 196 DSAHFTGARFTFAVADNARLRHTKLAFESSKSYHFAHNDIVINRDAQVTSTSFLL----- 250
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G LSRHN Q G +T+ L+S L V+ + D +R L+H +G+C RQ+HK IV
Sbjct: 251 GAGLSRHNTSTQLNGENTQLSLNSLVLPVNQEVAD--TRTYLEHNKGHCLSRQMHKTIVR 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G++KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 309 DK-GRAVFNGHIKVAQHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 367
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A+ ++ +F AE+ E P +R V+ +
Sbjct: 368 RIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTETLDNPILRQAVLQRI 416
>gi|378767457|ref|YP_005195925.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis LMG 5342]
gi|365186938|emb|CCF09888.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis LMG 5342]
Length = 425
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 127/229 (55%), Gaps = 15/229 (6%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELVEVST 256
+ ++ + + ++RH+ L +S + H + Q T++ + L
Sbjct: 196 DSAHFTGARFTFAVADNARLRHTKLAFESSKSYHFAHNDIVINRDAQVTSTSFLL----- 250
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G LSRHN Q G +T+ L+S L V+ + D +R L+H +G+C RQ+HK IV
Sbjct: 251 GAGLSRHNTSTQLNGENTQLSLNSLVLPVNQEVAD--TRTYLEHNKGHCLSRQMHKTIVR 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G++KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 309 DK-GRAVFNGHIKVAQHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 367
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A+ ++ +F AE+ E P +R V+ +
Sbjct: 368 RIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTETLDNPILRQAVLQRI 416
>gi|157370422|ref|YP_001478411.1| FeS assembly protein SufD [Serratia proteamaculans 568]
gi|157322186|gb|ABV41283.1| FeS assembly protein SufD [Serratia proteamaculans 568]
Length = 430
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RHN Q G + ++S L V + D +R L+H +GYC RQLHK +V+
Sbjct: 254 GAGLTRHNTSAQLNGEGSNLTINSLVLPVGKEVCD--TRTYLEHNKGYCESRQLHKVVVS 311
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 312 -DRAKAVFNGMIKVAKHAIKTDGQMTNHNLLLGKVAEVDTKPQLEIYADDVKCSHGATVG 370
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY Q+RGID A++ ++F+F AE+ E +IR V++ +
Sbjct: 371 RIDEEQLFYLQSRGIDKHAAQQMIIFAFAAELTEGIGNDTIRESVLARI 419
>gi|386015658|ref|YP_005933940.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis AJ13355]
gi|386079595|ref|YP_005993120.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea ananatis
PA13]
gi|327393722|dbj|BAK11144.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis AJ13355]
gi|354988776|gb|AER32900.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea ananatis
PA13]
Length = 425
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 127/229 (55%), Gaps = 15/229 (6%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELVEVST 256
+ ++ + + ++RH+ L +S + H + Q T++ + L
Sbjct: 196 DSAHFTGARFTFAVADNARLRHTKLAFESSKSYHFAHNDIVINRDAQVTSTSFLL----- 250
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G LSRHN Q G +T+ L+S L V+ + D +R L+H +G+C RQ+HK IV
Sbjct: 251 GAGLSRHNTSTQLNGENTQLSLNSLVLPVNQEVAD--TRTYLEHNKGHCLSRQMHKTIVR 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G++KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 309 DK-GRAVFNGHIKVAQHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 367
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A+ ++ +F AE+ E P +R V+ +
Sbjct: 368 RIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTETLDNPILRQAVLQRI 416
>gi|46445825|ref|YP_007190.1| sufD [Candidatus Protochlamydia amoebophila UWE25]
gi|46399466|emb|CAF22915.1| putative sufD [Candidatus Protochlamydia amoebophila UWE25]
Length = 450
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 181/409 (44%), Gaps = 58/409 (14%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI-----QPITRPSSSL 120
++ Q PLQK R + L P+++ E +R+ + S + IT+ +
Sbjct: 34 AINQGDPLQKARQKAWSQFLERGLPTKQSEAYRYIKLRHLFSQNYEFPKEESITKDQIAS 93
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCG 178
V + Q LV I+G + NLP V + +L + +++ S+ +
Sbjct: 94 LVYPECQHSFLVFINGQFCSEFSETKNLPSQVIISTLQEANQTFGTFFNNYWSKSLKEEN 153
Query: 179 DLFWSINGMGAPDLGVIYVP----------------AEG---------NDCYWANSVLEV 213
D F IN IY+P A+G N C A + ++
Sbjct: 154 DSFALINSALHHQGAFIYIPPKTIVETPIQILHLVQAQGQLLMLMPRINVCVGAQAEVKF 213
Query: 214 VIGKGGKVRHSYLQNQS----------------LNAAHIK---WTAVRQ--ETASGYELV 252
V K + Y NQ LN H++ + AVR + S ++ V
Sbjct: 214 VSSIHQKSMNGYFINQVTDFLVEDQAYVHYTQILNEEHVQAWHFEAVRAHLKKQSTFKTV 273
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHK 310
++ GG R++ H+ G + E L+ +L + +++H+ + +DH CR QL K
Sbjct: 274 CITEGGMTVRNDYHISLSGENAEVLLNGISML--EDKREVHTHIFIDHQAPNCRSYQLFK 331
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
++ + ++ F+G + V + AQ+T+A QL +LLL A + KPNL+I ADDVK SHG
Sbjct: 332 AVL-NDFSRSSFEGKIMVRQKAQKTEAFQLNNNLLLSDHAHADSKPNLEIFADDVKASHG 390
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
A + L+ QLFY + RG A+ L++ F +VIE P SI+ +
Sbjct: 391 ATVGQLDAEQLFYMKTRGFPEMAAKNLLIYGFAEQVIEMIPINSIKEAI 439
>gi|431931545|ref|YP_007244591.1| FeS assembly protein SufD [Thioflavicoccus mobilis 8321]
gi|431829848|gb|AGA90961.1| FeS assembly protein SufD [Thioflavicoccus mobilis 8321]
Length = 444
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y N V EV +G+ + H +Q ++ A HI V E AS Y V V G
Sbjct: 211 GGARYCTNLVAEVTLGRDAGLEHYRVQTEAPEAFHISALHVALEAASRYRGVNVGLGAAW 270
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 318
+R ++ + G E +LS +L Q D H L +DH C R+ K I+ H G
Sbjct: 271 ARTDLVARFAGEGAECDLSGLYLAGDRQLIDYH--LNVDHAVPGCASREHFKGIL-HGKG 327
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+AVFDG+V V R AQQTDA + +LLL A ++ KP L+I ADDVKCSHG + +E
Sbjct: 328 RAVFDGHVLVARDAQQTDAEMVNNNLLLSASAEIDTKPQLEIYADDVKCSHGTTVGQIEP 387
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVI 407
LFY ++RGI AR+ L +F E++
Sbjct: 388 ETLFYLRSRGIPASEARRMLCLAFAGEIL 416
>gi|374595900|ref|ZP_09668904.1| FeS assembly protein SufD [Gillisia limnaea DSM 15749]
gi|373870539|gb|EHQ02537.1| FeS assembly protein SufD [Gillisia limnaea DSM 15749]
Length = 438
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 124/229 (54%), Gaps = 1/229 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
N+ NSV E+ K V + +QN A+ I T V Q+ S + S GGKL+
Sbjct: 206 NNPVLTNSVTEIYAAKRAIVDYYKIQNDRDTASLIDNTFVEQQEQSNCSMHTFSFGGKLT 265
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R+N++ Q G +++ L ++ Q D ++ + P Q +K I A + V
Sbjct: 266 RNNLNFYQRGEHSDSTLKGITIIEDKQHVDHNTLVHHISPNCESHQDYKGIFAEN-STGV 324
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G V V++ AQ+ +A Q ++LL+ +AT+N KP L+I ADDVKCSHG I L++ L
Sbjct: 325 FNGKVLVDKEAQKINAFQANNNILLDDKATINAKPQLEIFADDVKCSHGCTIGQLDQDSL 384
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
FY ++RGI L+ A+ L+++F V+E P I+ ++ + +G +
Sbjct: 385 FYLRSRGIPLKEAKALLMYAFANNVLESVKIPEIKKRINHEIAQKLGVS 433
>gi|325953986|ref|YP_004237646.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
gi|323436604|gb|ADX67068.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
Length = 439
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 122/223 (54%), Gaps = 1/223 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V EV +GK +V+ QN S N + I + QE S + + GGK+ R+N++
Sbjct: 213 NAVTEVNVGKNAEVQIHKFQNDSDNVSLIDNVYINQERDSRASVFTFAFGGKIVRNNLNF 272
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
Q G + + L ++ Q D H+ ++ ++P +L+K I A VF+G +
Sbjct: 273 YQNGENCNSILDGVTIIDKKQHVDHHTLVVHNYPNCESHELYKGIYADE-AHGVFNGKIY 331
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V++ AQ+ +A Q ++LL A+++ KP L+I ADDVKCSHG + L+E +FY Q R
Sbjct: 332 VHKEAQKLNAFQQNNNVLLSDSASIDTKPQLEIFADDVKCSHGCTVGQLDEDAMFYMQQR 391
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GI E A+ L+++F A+ ++ P + +V V N +G +
Sbjct: 392 GIGKEVAQALLLYAFAADALQHVTIPQVTAKVNQLVANKLGVS 434
>gi|238796354|ref|ZP_04639863.1| hypothetical protein ymoll0001_21820 [Yersinia mollaretii ATCC
43969]
gi|238719799|gb|EEQ11606.1| hypothetical protein ymoll0001_21820 [Yersinia mollaretii ATCC
43969]
Length = 413
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 11/229 (4%)
Query: 205 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H ++ +S + AH R A Y + G L+
Sbjct: 187 HFTGARLTITLGDNAELSHYKLAFETPESYHFAHNDLVLSRDARARSYSFL---LGAGLT 243
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 244 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTIVRER-GK 300
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 301 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 360
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
QLFY Q+RGI+ A++ ++F+F AE+ E +IR V++ + + +
Sbjct: 361 QLFYLQSRGINQADAQQMIIFAFAAELTEAIHSETIRKVVLARIADRLA 409
>gi|42521820|ref|NP_967200.1| transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
gi|39574350|emb|CAE77854.1| Transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
Length = 419
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 191/416 (45%), Gaps = 74/416 (17%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSS 118
S S P L R + L+ P+RKDE + +T + S + P+
Sbjct: 11 SQSNPADGALSAFRKAGYDYALNKGLPTRKDEDWHYTSVKTLNEGTFLPSAVNPVEPSHE 70
Query: 119 SL---DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
+L + + +F ++V +G + N L+ ++LP GV +K +S + ++F
Sbjct: 71 TLVEIKKNLNPEFANIVFFNGVL-NKTLS-ADLPAGVS-----------LKELSQYPAQF 117
Query: 176 QCGDLFWSING--MGAPDL--------------GVIYVPAEGN----------------- 202
D F ++NG M P L V + AEG
Sbjct: 118 D--DTFDALNGAYMAKPFLVTVAKETSVEKPVNFVFFTSAEGGPSLMVNPRLSLDVGARS 175
Query: 203 -------------DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
Y+ANSV +V +G+ K+ + +Q +S +A +I T + E +
Sbjct: 176 SVRVLESHYGKAGTTYFANSVSDVHVGESAKLVYVRVQAESESAVNIGRTRLVVEKDANV 235
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--Q 307
E + +TG +LSRH++ V GP + TE+ + + +Q D S L++H G C Q
Sbjct: 236 ESLAFATGARLSRHSLDVILNGPGSNTEILGVYAVRGNQHVDNTS--LINHKVGECNTNQ 293
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
L+K I+ +AVF G V++ + AQ+ ++ QL +LLL +A + KP LQI ADDVK
Sbjct: 294 LYKGIL-DGESRAVFCGTVRIEKGAQKANSAQLNNNLLLSGKAEADSKPCLQIYADDVKA 352
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+HG+ + L +LFY Q+R I E A L + + +EVI + +I+ + H+
Sbjct: 353 AHGSTVGQLNREELFYLQSRAIPKEKAIPMLSYGYLSEVIYKISDENIQKWLSRHL 408
>gi|296116549|ref|ZP_06835159.1| FeS assembly protein SufD [Gluconacetobacter hansenii ATCC 23769]
gi|295976761|gb|EFG83529.1| FeS assembly protein SufD [Gluconacetobacter hansenii ATCC 23769]
Length = 422
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV----- 194
+ALN DG V GV G + VS ++ GD S + DLG
Sbjct: 130 GTALNTVMADDGAVVRVDAGVDAGALLLVSIAVA----GDAPISFHPRHRIDLGAGARLA 185
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
+ G Y N V EV + +G ++ H+ LQ + A+ I T + + Y+ +
Sbjct: 186 VLEATVGVGNYLHNPVFEVRVTEGARLTHARLQAEGQQASQIAVTHAQVASDGLYDSFNL 245
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
+ G LSRH VH LG ++ LL + Q DL S + P RQ K ++A
Sbjct: 246 TLGALLSRHEVHAALLGERACVHVNGAQLLDAKQHGDLSSIITHAAPNCVSRQTVKNVLA 305
Query: 315 -HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
H+ G VF G + V R AQ+TD Q+ ++LLL A ++ KP L+I ADDVKCSHGA +
Sbjct: 306 GHARG--VFQGKIHVERIAQKTDGYQMNQALLLSDTAEIDAKPELEIYADDVKCSHGATV 363
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
++ QLFY ++RGI L AR L+ +F +V+ +R+ +
Sbjct: 364 GAIDPEQLFYLRSRGITLSDARSMLIRAFLHDVVHLLEDTRLRDSL 409
>gi|405355139|ref|ZP_11024365.1| Iron-sulfur cluster assembly protein SufD [Chondromyces apiculatus
DSM 436]
gi|397091481|gb|EJJ22283.1| Iron-sulfur cluster assembly protein SufD [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 446
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 181/408 (44%), Gaps = 62/408 (15%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVS 123
P L+ LR + P+ +DE ++++ + I QP+ R + +S+
Sbjct: 25 PQWLKHLRADALAHFERQGLPTPRDEAWKYSRLAPIAEGAFQPVVRDARDAAHLASVVER 84
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLP--------------DGVYVGSLLG---------- 159
P LV +DG + +++ LP DG + SL+G
Sbjct: 85 LALPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGALLESLVGQRALAKEHAF 144
Query: 160 -------VSDGIMKRVS-DFISEFQCGDLFWSINGMG----APDLGV------------I 195
+ +G + R++ +SE LF + G G +P + V
Sbjct: 145 TALNAALLEEGALLRLAPGALSEAPVQLLFLT-RGEGPVLSSPRILVDAGESSEATLVET 203
Query: 196 YVPA--EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
Y A G+ + N+V EV +G + H LQ ++ A H+ RQ S +
Sbjct: 204 YASAGPAGSGATFTNAVTEVTLGDNASLHHYKLQAEADAALHVGALHARQGRDSRFASHA 263
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKC 311
+ GG ++R+ VH G + L+ L V Q L +R LDH PR R+L+K
Sbjct: 264 FAFGGAMARNEVHAAFAGEGGDATLNG--LYVGQGAQHLDNRTALDHAVPRCTSRELYKG 321
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
++ + F G ++V + AQ+TD+ Q R+LLL A + +P L+I ADDVKC+HGA
Sbjct: 322 VL-DGQSRGTFHGLIRVRQDAQRTDSRQQNRNLLLSETAQADARPQLEIFADDVKCAHGA 380
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
A+ L+ LFY ++RG+ A + L ++F EV+E P +R +
Sbjct: 381 AVGRLDAQALFYLRSRGVPRAEAERLLTYAFAREVVEAVPAGPVRTNI 428
>gi|238757750|ref|ZP_04618933.1| hypothetical protein yaldo0001_35070 [Yersinia aldovae ATCC 35236]
gi|238703993|gb|EEP96527.1| hypothetical protein yaldo0001_35070 [Yersinia aldovae ATCC 35236]
Length = 412
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQS---LNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H L +S + AH R A Y + G L+
Sbjct: 186 HFTGARLTIAVGDNAELSHYKLAFESPRSYHFAHNDLVLGRDARARSYSFL---LGAGLT 242
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 243 RHNTSAQLNGEGATLSMNSLLLPIGREICD--TRTYLEHNKGYCESRQLHKVIVRER-GK 299
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 300 AIFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 359
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AE+ E +IR V++ +
Sbjct: 360 QLFYLQSRGINQADAQQMIIFAFAAELTEAIHNETIRKVVLARI 403
>gi|262196468|ref|YP_003267677.1| FeS assembly protein SufD [Haliangium ochraceum DSM 14365]
gi|262079815|gb|ACY15784.1| FeS assembly protein SufD [Haliangium ochraceum DSM 14365]
Length = 467
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQS-LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
A +V E+ + ++ H + + S + + AVRQ+ S Y V+ GGKLSR ++
Sbjct: 231 ACAVTEITLAPSAELEHVRVHHHSGIALQQVARVAVRQDQGSSYRSRVVTLGGKLSRLDL 290
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
V P+ EL + + D ++ + PR ++ ++ I+A + G AVFDG
Sbjct: 291 DVAMTAPEARCELDGVYHAGRGEHLDHYTTIDHQAPRCSSQERYRGIIAET-GHAVFDGT 349
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V + AQ +DA Q R+LLL+ A V+ KP+L+I ADDV CSHGA + L+++QLFY +
Sbjct: 350 IMVQQDAQHSDAHQENRNLLLDDDAVVHTKPHLRIDADDVSCSHGATVGSLDDAQLFYLR 409
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
+RGI + AR L F+F E+I+ +R + + ++N +
Sbjct: 410 SRGIGDDQARAVLTFAFVRELIDEIGCAPLREALSAQLRNRL 451
>gi|404450970|ref|ZP_11015945.1| Iron-regulated ABC transporter permease protein SufD [Indibacter
alkaliphilus LW1]
gi|403763387|gb|EJZ24346.1| Iron-regulated ABC transporter permease protein SufD [Indibacter
alkaliphilus LW1]
Length = 424
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 119/226 (52%), Gaps = 1/226 (0%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y+AN V+EV + +++ LQN+S NA + + + +S G + R+
Sbjct: 198 AYFANQVVEVKASPNSQTKYAKLQNESRNAITVNNFETDIHRDAVFTSTVISLNGDMVRN 257
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 323
N+ + L E + +LL D H+ + P +L+K I+ S + VF+
Sbjct: 258 NLSLNLLDSGCEGNMYGLYLLNGKTHVDNHTNVDHTKPHAESNELYKGILTDS-SRGVFN 316
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V + AQ+T+A Q ++LL AT+N KP L+I ADDVKCSHG L+E LFY
Sbjct: 317 GKIFVRQDAQKTNAFQQNNNILLSEDATINTKPQLEIWADDVKCSHGCTTGQLDEEALFY 376
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
QARG+ + AR L+++F E++E S R QV+ V+ +G+
Sbjct: 377 LQARGLGRDQARGFLLYAFAGEIMEYISDDSFRQQVIDLVQERLGS 422
>gi|89889830|ref|ZP_01201341.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
gi|89518103|gb|EAS20759.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
Length = 437
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 124/224 (55%), Gaps = 7/224 (3%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +QN LNA+ I T+V Q++ S L S GG L+R+N++
Sbjct: 211 NSVTEIFADKRAMVDYYKIQNDHLNASLIDHTSVEQKSDSEVRLHTFSFGGALTRNNLNF 270
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC---RQLHKCIVAHSLGQAVFDG 324
Q G + L+ ++ Q D HS L+ H C +Q + ++G VF+G
Sbjct: 271 YQRGEHCNSILNGVTIIEGKQHVD-HSTLV-HHTAPNCESYQQYKQIFDDKAVG--VFNG 326
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
V V++ AQ+ +A Q ++L+ +AT+N KP L+I ADDV+CSHG I L+E LFY
Sbjct: 327 KVLVDKIAQKINAFQQNNNILVSDKATINAKPQLEIFADDVRCSHGCTIGQLDEDALFYM 386
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Q+RGI + AR L+F+F V+E P I++++ + +G
Sbjct: 387 QSRGIGKKEARALLMFAFANSVLESVKIPEIKSRITKLIAKKLG 430
>gi|270261597|ref|ZP_06189870.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
gi|421783260|ref|ZP_16219711.1| feS assembly protein SufD [Serratia plymuthica A30]
gi|270045081|gb|EFA18172.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
gi|407754700|gb|EKF64832.1| feS assembly protein SufD [Serratia plymuthica A30]
Length = 428
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 181/390 (46%), Gaps = 54/390 (13%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRP-----SSSLDVSTDAQFPSLVLID 135
Q L WP+RK E +++T + Q ++P P +L ++ DA LV +D
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLEQQFLEPQAEPIAAAQRDALALNLDAY--RLVFVD 93
Query: 136 GFIQNSALNLSNL----------------PDGVYVGSLLGVSDGI-----MKRVSDFISE 174
G N+AL+ S+L P+ + L +++ + M RV+
Sbjct: 94 GRF-NAALSDSDLGEYQFEVTPYGTPQALPEPIQPEIFLHLTESLAQETSMIRVAAGKIA 152
Query: 175 FQCGDLFWSINGMGAP------------DLG------VIYVPAEGNDC-YWANSVLEVVI 215
+ L +G GA D+G VI ND ++ + L I
Sbjct: 153 ARPLYLLHISSGRGAEGEVNTVHHRHHLDVGRNARAEVIEHYVSLNDAAHFTGARLTASI 212
Query: 216 GKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTE 275
G ++RH L +S + H + + + G L+RHN Q G +
Sbjct: 213 GDNAELRHCKLAFESQASYHFAHNDLVIGRDARVKSDSFLLGAGLTRHNTSAQLNGEGSN 272
Query: 276 TELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQ 333
++S L V D +R L+H +GYC RQLHK +V+ +AVF+G +KV ++A
Sbjct: 273 LVINSLVLPVGKDVCD--TRTYLEHNKGYCESRQLHKTVVS-DRAKAVFNGMIKVAKHAI 329
Query: 334 QTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLET 393
+TD +LLL A V+ KP L+I ADDVKCSHGA + ++E QLFY Q+RGID
Sbjct: 330 KTDGQMTNHNLLLGKVAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLQSRGIDKHA 389
Query: 394 ARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
A++ ++F+F AE+ E IR V++ +
Sbjct: 390 AQQMIIFAFAAELTEGIGNDVIREWVLTRI 419
>gi|440230704|ref|YP_007344497.1| Iron-regulated ABC transporter permease protein SufD [Serratia
marcescens FGI94]
gi|440052409|gb|AGB82312.1| Iron-regulated ABC transporter permease protein SufD [Serratia
marcescens FGI94]
Length = 424
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 175/390 (44%), Gaps = 58/390 (14%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q L WP+RK E +++T + + Q + S + + P LV +DG
Sbjct: 36 QQALRLGWPTRKHENWKYTPLDGLLAQQFHAPQPATVSAERCAELALPLDAYRLVFVDGR 95
Query: 138 IQNSALNLSNLPDGVYVGSLLG--VSDGIMKRVSDFISEF---QCGDLFWSINGMGAPDL 192
Q +LS+ G Y L G + + I + ++E + + + A L
Sbjct: 96 YQ---ADLSDADLGDYQLELTGYQLPEPIQPEIFLHLTESLAPESSLIRLPAGKVAARPL 152
Query: 193 GVIYVPAEGNDCYWANSV-----LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 247
++++ + + NSV LEV G +V Y+ SLN H +T R
Sbjct: 153 YLLHISSGRSGAGEINSVHHRHHLEVAAGAQAEVIEHYV---SLNE-HAHFTGARLTATV 208
Query: 248 G-----------------YELVEVST---------------GGKLSRHNVHVQQLGPDTE 275
G Y G L+RHN Q G
Sbjct: 209 GDNAQLHHCKLAFENQPSYHFAHNDLKIGRDARVKSDSFLLGAGLTRHNTSAQLNGEGAN 268
Query: 276 TELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQ 333
+L+S L V + D +R L+H +GYC RQLHK +V+ +AVF+G +KV ++A
Sbjct: 269 LQLNSLVLPVGKEICD--TRSYLEHNKGYCESRQLHKTVVS-DRARAVFNGMIKVAQHAI 325
Query: 334 QTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLET 393
+TD +LLL A V+ KP L+I ADDVKCSHGA + ++E QLFY Q+RGI
Sbjct: 326 KTDGQMTNHNLLLGKVAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLQSRGIAKHD 385
Query: 394 ARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
A++ ++F+F AE+ E IR +V++H+
Sbjct: 386 AQQMIIFAFAAELTEGIGNDVIRERVLAHI 415
>gi|148243115|ref|YP_001228272.1| SufD protein, Fe-Scluster assembly [Synechococcus sp. RCC307]
gi|147851425|emb|CAK28919.1| SufD protein, Fe-Scluster assembly [Synechococcus sp. RCC307]
Length = 392
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 107/202 (52%), Gaps = 3/202 (1%)
Query: 211 LEVVIGKGGK-VRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
LE + G + V +LQ A + + +RQ+ S Y V G L+R + Q
Sbjct: 178 LEADLATGARLVEGQWLQGDE-GAVLMAGSVIRQQPGSSYSRTAVVQGWALARQEPQLLQ 236
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
ET L +L DLHS + D P G QL K +V ++F+G V+V
Sbjct: 237 CAGGAETCLRDLAVLSGTAIADLHSLVRFDGPDGRLDQLQKALV-DGRSHSIFNGTVQVP 295
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ TDA QL+R LLL +A V+ KP L+I+ADDV+CSHGA +S L + +LFY ++RGI
Sbjct: 296 RAAQGTDAAQLSRHLLLSEQAWVDTKPELEIVADDVRCSHGATVSSLADEELFYLRSRGI 355
Query: 390 DLETARKALVFSFGAEVIERFP 411
D A + L F EV+ + P
Sbjct: 356 DRPAATELLRRGFCLEVLNQLP 377
>gi|304414759|ref|ZP_07395741.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Regiella insecticola LSR1]
gi|304283157|gb|EFL91569.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Regiella insecticola LSR1]
Length = 452
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 121/228 (53%), Gaps = 11/228 (4%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV---RQETASGYELVEVSTGGKLSR 262
+ N+ L + +G ++ H L ++ + H V R A + G L+R
Sbjct: 227 FTNARLTMAVGDNAQLTHCKLAFETAQSYHFSHNDVILGRHARAHSDSFL---LGAGLTR 283
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQA 320
H+ + G D + ++S L +S + D SR L+H G+C RQLHK IV H G A
Sbjct: 284 HHTSSKLNGEDGDVSINSLLLPLSGEIAD--SRSYLEHNTGHCQSRQLHKMIVQHG-GTA 340
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+G +KV +A +TD +LLL +A V KP L+I ADDVKCSHGA + + Q
Sbjct: 341 VFNGLLKVAPHAVKTDGQMTNNNLLLSQQAFVATKPQLEIYADDVKCSHGATVGRISAEQ 400
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
LFY Q+RGI+ A+K ++F+F AE+ E IR QV+ + + +
Sbjct: 401 LFYLQSRGINQAKAKKMIIFAFAAELTETLENNLIRQQVIKRITDRLA 448
>gi|378579478|ref|ZP_09828145.1| component of SufBCD complex [Pantoea stewartii subsp. stewartii
DC283]
gi|377817952|gb|EHU01041.1| component of SufBCD complex [Pantoea stewartii subsp. stewartii
DC283]
Length = 425
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G LSRHN Q G +T+ L+S L V+ + D +R L+H +G+C RQ+HK IV
Sbjct: 251 GAGLSRHNTSTQLNGENTQLSLNSLVLPVNQEVAD--TRTYLEHNKGHCLSRQMHKTIVR 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G++KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 309 DK-GRAVFNGHIKVAQHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 367
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A+ ++ +F AE+ E P +R V+ +
Sbjct: 368 RIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTETLENPVLRQAVLQRI 416
>gi|408490462|ref|YP_006866831.1| cysteine desulfurase activator complex protein SufD [Psychroflexus
torquis ATCC 700755]
gi|408467737|gb|AFU68081.1| cysteine desulfurase activator complex protein SufD [Psychroflexus
torquis ATCC 700755]
Length = 437
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 3/218 (1%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
NSV EV +GK +V + +QN ++ I T ++QE S L S GGK++R+N+
Sbjct: 210 TNSVTEVYVGKNAEVDYYKIQNDKTTSSLIDNTFIKQERDSTCSLHTFSLGGKITRNNLR 269
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH-SLGQAVFDGN 325
Q G + + L +L Q D ++ + P Q +K I + S+G VF+G+
Sbjct: 270 FYQHGENCNSILKGVTILEGKQHVDHNTLVHHIEPNCESHQDYKGIFSEKSVG--VFNGS 327
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V+R AQ+T+A Q ++LL+ AT N KP L+I ADDVKCSHG I L+ L+Y +
Sbjct: 328 ILVDRLAQKTNAFQSNNNILLDDGATCNSKPQLEIFADDVKCSHGCTIGQLDNEALYYLR 387
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
RGI + AR L+F+F +V+ P I+ ++ +
Sbjct: 388 TRGIPKKEARALLMFAFANKVLGSVKIPEIKKRITKQI 425
>gi|347757852|ref|YP_004865414.1| feS assembly protein SufD [Micavibrio aeruginosavorus ARL-13]
gi|347590370|gb|AEP09412.1| feS assembly protein SufD [Micavibrio aeruginosavorus ARL-13]
Length = 414
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 174/408 (42%), Gaps = 77/408 (18%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV 122
S + L +P L RD + + + P+ K E +++T+ I P+ + +
Sbjct: 33 SDTLLHEPDWLAACRDKAREIVARRGLPTAKLEGWKYTN--------ILPVVKAIN---- 80
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPD-GVYVGSLLGV--SDGIMKRVSDFIS--EFQC 177
Q +N+++ G+ V SL G+ D + K +S +S E+
Sbjct: 81 ----------------QAGTVNITHKEGHGITVNSLAGMLGEDWVQKAISAPLSDKEYNA 124
Query: 178 GDLFWSINGMGAPDLGVIYVPAE------------------------------------- 200
+ W + + D VI VPA
Sbjct: 125 ENTLWYLGNLFLRDGLVIDVPANTEAKTPLDLTMVADGGLANARLIIRLGANARLTVIEH 184
Query: 201 --GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
G YW N ++++ G + H Q S A H + T SGYE + STG
Sbjct: 185 HTGTGAYWKNIQTQIILADGAHLTHVRYQEDSEQAVHTQLTHSVLGKDSGYEGIVFSTGS 244
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHS 316
+L R+ +H G LS+ +LL Q D + +L+DH P G Q + ++
Sbjct: 245 RLFRNQLHGVMNGAGAVCSLSAVNLLTGQQHGD--TTILVDHMAPNGNSNQNIRTVL-DG 301
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
VF G V V++ AQ+TD QL++SL+L A ++ KP L+I ADDVKCSHGA L
Sbjct: 302 TAHGVFQGKVHVHQPAQKTDGYQLSKSLILNEGAEMDTKPELEIYADDVKCSHGATTGQL 361
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
+E LFY +ARGI AR L+ +F E +R +I++ + VK
Sbjct: 362 DEGPLFYMRARGIPEAQARALLIEAFVDEAFDRVADETIQSVLKDKVK 409
>gi|386824747|ref|ZP_10111876.1| FeS assembly protein SufD [Serratia plymuthica PRI-2C]
gi|386378192|gb|EIJ19000.1| FeS assembly protein SufD [Serratia plymuthica PRI-2C]
Length = 428
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 6/225 (2%)
Query: 202 NDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
ND ++ + L IG ++RH L +S + H + + + G L
Sbjct: 198 NDAAHFTGTRLTASIGDNAELRHCKLAFESQASYHFAHNDLVIGRDARVKSDSFLLGAGL 257
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 318
+RHN Q G + ++S L V D +R L+H +GYC RQLHK +V+
Sbjct: 258 TRHNTSAQLNGEGSNLMINSLVLPVGKDVCD--TRTYLEHNKGYCESRQLHKTVVS-DRA 314
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++E
Sbjct: 315 KAVFNGMIKVAKHAIKTDGQMTNHNLLLGKVAEVDTKPQLEIYADDVKCSHGATVGRIDE 374
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGID A++ ++F+F AE+ E IR V++ +
Sbjct: 375 EQLFYLQSRGIDKHAAQQMIIFAFAAELTEGIGNDVIREWVLARI 419
>gi|108760528|ref|YP_629415.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
gi|108464408|gb|ABF89593.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
Length = 446
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 181/416 (43%), Gaps = 78/416 (18%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF- 128
P L++LR + P+ +DE ++++ I P T DVS D
Sbjct: 25 PQWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAIAEGTFIPRT------DVSRDTAHL 78
Query: 129 -----------PSLVLIDGFIQNSALNLSNLP--------------DGVYVGSLLG---- 159
P LV +DG + +++ LP DG + S+LG
Sbjct: 79 SAVVERLGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGELLESVLGQRAL 138
Query: 160 -------------VSDGIMKRVS-DFISEFQCGDLFWSINGMGAPDLG---VIYVPAEGN 202
+ +G++ R++ +SE +F + AP L ++ V E +
Sbjct: 139 ANEHAFTALNAALLEEGVLLRLAPGALSEVPVQVVFLTRGD--APVLSSPRILVVAGESS 196
Query: 203 DCY----------------WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
+ + N+V EV +G + H LQ ++ A H+ RQ
Sbjct: 197 EATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVEADAALHVGALHARQGRD 256
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGY 304
S + + GG ++R+ VH G + L+ L V Q L +R LDH PR
Sbjct: 257 SRFASHAFAFGGAMARNEVHAAFAGEGGDATLNG--LYVGQGAQHLDNRTALDHAVPRCT 314
Query: 305 CRQLHKCIV-AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
R+L+K ++ HS G F G ++V + AQ+TD+ Q R+LLL A + +P L+I AD
Sbjct: 315 SRELYKGVLDGHSRG--TFHGLIRVRQDAQRTDSRQQNRNLLLSESAQADARPQLEIFAD 372
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
DVKC+HGAA+ L+ LFY ++RG+ A + L ++F EV+E P +R +
Sbjct: 373 DVKCAHGAAVGRLDAQALFYLRSRGVPQAEAERLLTYAFAREVVEAVPAGPVRANI 428
>gi|340617828|ref|YP_004736281.1| protein SufD [Zobellia galactanivorans]
gi|339732625|emb|CAZ95893.1| Protein SufD [Zobellia galactanivorans]
Length = 438
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 191/432 (44%), Gaps = 62/432 (14%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ +R + + +PS+K+E +++T + ++
Sbjct: 3 LKDKLISSFMAFENNVDIEHPVHDVRTEAMKNFERKGFPSKKEEAWKYTSLNSLQKIDFS 62
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
R ++L+ ++ +V +DG I +S L+ DGV + +
Sbjct: 63 IFPREENTLEYKNVKKYFLHEVDSYKIVFVDG-IYSSYLS-ETTHDGVDICLMSAALTKP 120
Query: 165 MKR--VSDFISEFQCGDL-FWSINGMGAPDLGVIYVP--------------AEGNDC--- 204
M R + + ++ D S+N + + IY+P A GN+
Sbjct: 121 MYRPVIDVYFNKVASKDESLTSLNTAFSREGAYIYIPKNKMPKKPIEIIHFATGNEASLL 180
Query: 205 ----------------------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
NSV E+ K V + +QN + +A+ I
Sbjct: 181 LQPRNLVIAEENAEVQIIERHQSLTSNEVLTNSVTEIFAAKNAIVDYYKIQNDAPSASLI 240
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
T + Q+ S ++ S GGKL+R+N++ Q G ++ + +L Q D H+ +
Sbjct: 241 DNTYIDQKDKSVVKIHTFSFGGKLTRNNLNFYQNGEYIDSTMKGVTILGDKQHVDHHTLV 300
Query: 297 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
P Q +K I S VF+G + V++ AQ+T+A Q ++L+ +AT+N KP
Sbjct: 301 HHIEPNCESHQDYKGIYGDS-STGVFNGKIIVDKIAQKTNAFQQNNNILVSDKATINTKP 359
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
L+I ADDVKCSHG I L+E LFY Q+RGI + AR L+++F V+E P ++
Sbjct: 360 QLEIFADDVKCSHGCTIGQLDEDALFYLQSRGIPKKEARALLMYAFANNVLESVRIPELK 419
Query: 417 NQVVSHVKNLMG 428
++ + +G
Sbjct: 420 ARINKLIAKKLG 431
>gi|311746538|ref|ZP_07720323.1| FeS assembly protein SufD [Algoriphagus sp. PR1]
gi|126575438|gb|EAZ79770.1| FeS assembly protein SufD [Algoriphagus sp. PR1]
Length = 422
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 125/228 (54%), Gaps = 7/228 (3%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y+ N V+E+ G ++R+ LQN+ NA + T S + V +S G + R+N
Sbjct: 197 YFVNKVVEIKGGLNSQIRYYSLQNEGSNAIEVCNTETNLLQDSRFSSVTISLSGDMVRNN 256
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVA-HSLGQAV 321
+++ LG ++E + +LL D H+ + DH P +L+K I+A HS G V
Sbjct: 257 LNLNLLGSNSEGNMYGIYLLNGKAHVDNHTNV--DHTIPHAESNELYKGILADHSRG--V 312
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G + V + AQ+T+A Q ++LL A VN KP L+I ADDVKCSHG L+E L
Sbjct: 313 FNGKIFVRQDAQKTNAFQQNNNILLSEDAIVNTKPQLEIWADDVKCSHGCTTGQLDEEAL 372
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
FY QARGID A+ L+++F EV+E S + V V+ +G+
Sbjct: 373 FYLQARGIDKVQAKGLLLYAFAGEVLEHIQNDSFKTYVTELVQERLGS 420
>gi|398801400|ref|ZP_10560643.1| FeS assembly protein SufD [Pantoea sp. GM01]
gi|398091957|gb|EJL82380.1| FeS assembly protein SufD [Pantoea sp. GM01]
Length = 425
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 5/211 (2%)
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
+ K++H L +S + H V + G LSRHN Q G +T
Sbjct: 209 VADNAKLQHIKLSFESEKSYHFAHNDVVMGRDANVSTTSFLLGAGLSRHNTSAQLNGENT 268
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYA 332
++S L V+ + D +R L+H +G+C RQ+HK ++A G+AVF+G +KV +A
Sbjct: 269 NLAINSLSLPVNQEVCD--TRSYLEHNKGHCISRQMHK-VIARDKGRAVFNGMIKVAPHA 325
Query: 333 QQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLE 392
+TD +LLL A V+ KP L+I ADDVKCSHGA I ++E Q+FY ++RGID
Sbjct: 326 LKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIGRIDEEQMFYLRSRGIDET 385
Query: 393 TARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
A++ ++ +F AE+ E P +R V+ +
Sbjct: 386 AAQRMIIHAFAAELTETLENPVLRQVVLQRI 416
>gi|400405084|ref|YP_006587943.1| FeS assembly protein SufD [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400363447|gb|AFP84515.1| FeS assembly protein SufD [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 423
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 134/248 (54%), Gaps = 13/248 (5%)
Query: 186 GMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 245
G+GA + + + N +++ + + +G K+ H L +S + H +
Sbjct: 183 GIGAQGKVIEHFVSINNQGHFSGARTSITVGDSAKLSHVKLAFESRASYHFS----HNDI 238
Query: 246 ASGYELVEVST----GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 301
G + V S+ G L+RH Q G ++ ++S L D+ R L+H
Sbjct: 239 TLGRDAVVHSSAFILGAGLTRHQTSAQLNGEGSDLAINSLLLPSERDISDI--RTYLEHN 296
Query: 302 RGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQ 359
+GYC RQLHK ++A G+ VF+G +KV ++A +TD+ +LLL+ +A VN KP L+
Sbjct: 297 KGYCISRQLHK-VIARDHGKGVFNGLIKVAKHAVKTDSRMTNNNLLLDHQAEVNSKPQLE 355
Query: 360 IIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
I ADDVKCSH A + +++ Q+FY ++RGI + A+K ++++F +EV E IR+ V
Sbjct: 356 IYADDVKCSHAATVGQIQQEQMFYLRSRGITRDAAQKMIIYAFASEVTEAIDQDVIRDTV 415
Query: 420 VSHVKNLM 427
+ + +++
Sbjct: 416 LERISHIL 423
>gi|319953155|ref|YP_004164422.1| iron-regulated ABC transporter permease protein sufd [Cellulophaga
algicola DSM 14237]
gi|319421815|gb|ADV48924.1| Iron-regulated ABC transporter permease protein SufD [Cellulophaga
algicola DSM 14237]
Length = 438
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 193/433 (44%), Gaps = 64/433 (14%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ ++R + + + +PS+KDE +++T + ++
Sbjct: 3 LKDKLISSFMAFENNVDVDHPVHEVRSEAMKNFETKGFPSKKDEAWKYTSLNGLQKIDFS 62
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLP-DGVYVGSLL-GVSD 162
+ ++L+ ++ +V IDG + NLS DGV + + ++
Sbjct: 63 IFPKEVNALEYREVKKYFINEIDTYKIVFIDGIFSS---NLSETTHDGVDICLMSSALNK 119
Query: 163 GIMKRVSD-FISEFQCGDL-FWSINGMGAPDLGVIYVP--------------AEGNDC-- 204
+ K++ D + ++ D ++N + + IY+P A GN+
Sbjct: 120 PMYKQIIDVYFNKIASKDESLTTLNTAFSKEGAYIYIPKNKMPKKPIEILHFATGNEASL 179
Query: 205 -----------------------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 235
N V E+ K V + +QN NA+
Sbjct: 180 MLQPRNLIIVEEHAEVQIIERHQSLTSNEVLTNCVTEIFAAKSAIVDYYKVQNDDANASL 239
Query: 236 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 295
I T + Q+ S ++ S GGKL+R+N++ Q G ++ + +L Q D H+
Sbjct: 240 IDNTYIDQKDKSDVKVHTFSFGGKLTRNNLNFYQNGEYIDSTMKGVTILGDKQHVDHHTL 299
Query: 296 LLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVK 355
+ P Q +K I S VF+G + V + AQ+T+A Q ++L+ +A++N K
Sbjct: 300 VHHIEPNCESHQDYKGIYNDS-STGVFNGKIIVEKLAQKTNAFQQNNNILISDKASINTK 358
Query: 356 PNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
P L+I ADDVKCSHG I L+E LFY Q+RGI + A L+++F V+E P +
Sbjct: 359 PQLEIFADDVKCSHGCTIGQLDEDALFYLQSRGIPKKEASALLMYAFANNVLESVRIPEL 418
Query: 416 RNQVVSHVKNLMG 428
+ ++ + N +G
Sbjct: 419 KIRINKLIANKLG 431
>gi|300716482|ref|YP_003741285.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
billingiae Eb661]
gi|299062318|emb|CAX59435.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
billingiae Eb661]
Length = 408
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 11/214 (5%)
Query: 215 IGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 271
+ K +++H ++ N S + +H R + + G L+RHN VQ G
Sbjct: 192 VAKNAQLKHYKLAFEHNSSYHFSHNDLVIERDANVKSHSFL---LGAGLTRHNTSVQLNG 248
Query: 272 PDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVN 329
T+ ++S L V + D SR L+H +G+C RQLHK IV +AVF+G +KV
Sbjct: 249 EGTDLGINSLMLPVDKEVCD--SRTYLEHNKGHCQSRQLHKTIV-RDKARAVFNGMIKVA 305
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
++A +TD +LLL A V+ KP L+I ADDVKCSHGA I +++ Q+FY +ARGI
Sbjct: 306 KHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLRARGI 365
Query: 390 DLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+ E+A++ ++++F AE+ E ++ V+ +
Sbjct: 366 NEESAQRMIIYAFAAELTEAITDEVLKEAVMQRI 399
>gi|381186652|ref|ZP_09894222.1| iron-sulfur cluster assembly protein SufD [Flavobacterium frigoris
PS1]
gi|379651496|gb|EIA10061.1| iron-sulfur cluster assembly protein SufD [Flavobacterium frigoris
PS1]
Length = 438
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V +QN +L A I T V Q+ S + S GG ++R+N++
Sbjct: 212 NSVTEIFAQKRAIVDFYKIQNDNLTANLIDNTYVSQKQESHVSVHTFSFGGNITRNNLNF 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G + L+ ++ Q D ++ + P Q +K I + VF+G V
Sbjct: 272 YHFGERLTSTLNGITIIGEKQHVDHYTLVKHSTPNCESFQDYKGIYS-DRSTGVFNGKVY 330
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V R AQ+T+A Q + ++LL +AT+N KP L+I ADDVKCSHG I L+E+ +FY QAR
Sbjct: 331 VEREAQKTNAFQKSNNILLSDKATINAKPQLEIFADDVKCSHGCTIGQLDETAMFYMQAR 390
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
GI + A+ L+++F VIE P ++ ++ + N +G
Sbjct: 391 GIPKKEAKALLMYAFSNAVIENIKIPELKQRITKIIANKLG 431
>gi|333926979|ref|YP_004500558.1| FeS assembly protein SufD [Serratia sp. AS12]
gi|333931933|ref|YP_004505511.1| FeS assembly protein SufD [Serratia plymuthica AS9]
gi|386328802|ref|YP_006024972.1| FeS assembly protein SufD [Serratia sp. AS13]
gi|333473540|gb|AEF45250.1| FeS assembly protein SufD [Serratia plymuthica AS9]
gi|333491039|gb|AEF50201.1| FeS assembly protein SufD [Serratia sp. AS12]
gi|333961135|gb|AEG27908.1| FeS assembly protein SufD [Serratia sp. AS13]
Length = 428
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 119/222 (53%), Gaps = 5/222 (2%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
++ + L +G ++RH L +S + H + + + G L+RH
Sbjct: 201 AHFTGTRLTASVGDNAELRHCKLAFESQASYHFAHNDLVIGRDARVKSDSFLLGAGLTRH 260
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 321
N Q G + ++S L V D +R L+H +GYC RQLHK +V+ +AV
Sbjct: 261 NTSAQLNGEGSNLAINSLVLPVGKDVCD--TRTYLEHNKGYCESRQLHKTVVS-DRAKAV 317
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++E QL
Sbjct: 318 FNGMIKVAKHAIKTDGQMTNHNLLLGKVAEVDTKPQLEIYADDVKCSHGATVGRIDEEQL 377
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
FY Q+RGID A++ ++F+F AE+ E IR V++ +
Sbjct: 378 FYLQSRGIDKHAAQQMIIFAFAAELTEGIGNDVIREWVLTRI 419
>gi|397689345|ref|YP_006526599.1| Fe-S cluster assembly protein SufD [Melioribacter roseus P3M]
gi|395810837|gb|AFN73586.1| Fe-S cluster assembly protein SufD [Melioribacter roseus P3M]
Length = 447
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 194/421 (46%), Gaps = 65/421 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
L+K+R++S +P+ K+E +++TD S + ++ P+ PS T + LV
Sbjct: 33 LKKMRETSLAKFSEFDFPTNKNEEWKYTDVSFARKNKFNPL--PSERKTGYTKDEIKKLV 90
Query: 133 L----------IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LF 181
++G ++S D + +G+L G + + +++ + D LF
Sbjct: 91 FGGFDYNLITFVNGRYSAELSDISEDGDKIIIGNLNGFIESHGEIAGNYLGKISSEDNLF 150
Query: 182 WSINGMGAPDLGVIYVPAEGNDC------------------------------------- 204
++NG+ D GV+ V E ++
Sbjct: 151 HALNGVYMQD-GVVVVLKENSELSKPLQALFINGDPEENLLIAPRNLIVAGKNSRASVIF 209
Query: 205 ---------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
Y+ + + E+++ + + +Q ++ ++ HI+ Q+ S ++
Sbjct: 210 NYYGGSKESYFTDGITEIMLEEDSLIDVYKIQRENPSSYHIEKLQAIQKDGSVLNHYNLN 269
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 313
GG+L R++++ + G + ET F+L +Q D H+ +DH P +L+K I+
Sbjct: 270 FGGRLIRNDINSKLDGENIETHYYGFYLGKENQHIDNHT--FVDHAKPNSMSNELYKGIL 327
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
S + VF+G + V + AQ+T+A Q +++LL A V+ KP L+I ADDVKC+HGA +
Sbjct: 328 DDS-ARGVFNGKIIVRQDAQKTNAYQQNKTVLLSADARVDAKPQLEIFADDVKCTHGATV 386
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDVS 433
L+E FY ++RG+ + A+ L+ +F A+VI+ ++ Q+ + + +VS
Sbjct: 387 GHLDEEAEFYIRSRGVPSDLAKSILIRAFAADVIDEIKIVELKEQINHLIFEELHRQEVS 446
Query: 434 F 434
F
Sbjct: 447 F 447
>gi|330994037|ref|ZP_08317967.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
gi|329758983|gb|EGG75497.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
Length = 424
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 5/212 (2%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
A G Y N + ++ + GG + H+ +Q + A H+ + R A Y+ ++ G
Sbjct: 192 AAGQGFYLHNPLYDITVAGGGHLSHARVQVEGQEAVHLAVSHARIAAAGLYDSFTLTLGA 251
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
LSRH VH ++ LL Q DL S + P RQ K +++ G
Sbjct: 252 SLSRHEVHAVLTATRACVHVNGAQLLTGRQHGDLTSVITHAAPDCISRQTVKNVLS---G 308
Query: 319 QA--VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
QA VF G + V+R AQ+TD Q+ ++LLL +A ++ KP L+I ADDVKCSHGA + L
Sbjct: 309 QAHGVFQGKIHVDRIAQKTDGYQMNQALLLSDQAEIDAKPELEIYADDVKCSHGATVGAL 368
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIE 408
+E QLFY ++RGI + AR L+ +F +V++
Sbjct: 369 DEDQLFYLRSRGISGDVARSILIRAFLHDVVD 400
>gi|392375425|ref|YP_003207258.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Methylomirabilis oxyfera]
gi|258593118|emb|CBE69429.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Methylomirabilis oxyfera]
Length = 480
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 125/235 (53%), Gaps = 5/235 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+D Y N+V E+V G+ + + +Q +S A H+ V+ + + GG L
Sbjct: 245 GHDVYCTNAVTEIVGGENAVIDYYKVQRESEEAFHVATAQVQLGRGGTFSSHTIDLGGAL 304
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 318
R+N+ V G E L+ + Q D H+R+ DH R +C RQL+K I+
Sbjct: 305 VRNNLGVALDGDGAECTLNGLSMATGRQHVDNHTRI--DHIRPHCSSRQLYKGIL-DGKS 361
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ VF+G V V+ A++TDA Q+ ++LLL A ++ KP L+I +DVKC+HG I ++
Sbjct: 362 RGVFNGKVVVHGAARKTDARQVNKNLLLSEDAVIDSKPQLEIFNNDVKCTHGTTIGQHDQ 421
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDVS 433
+FY ++RGID R+ L ++F +E++ R IR ++ + + +G S
Sbjct: 422 DAIFYLRSRGIDPAATRRLLTYAFASELLSRITIEPIRARLEALLVTRLGNRSTS 476
>gi|332292133|ref|YP_004430742.1| FeS assembly protein SufD [Krokinobacter sp. 4H-3-7-5]
gi|332170219|gb|AEE19474.1| FeS assembly protein SufD [Krokinobacter sp. 4H-3-7-5]
Length = 437
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 192/433 (44%), Gaps = 63/433 (14%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+D L S+ L + + P+ +R+ + +T + +P++K E +++T + I
Sbjct: 2 SLKDKLVSNHIVLQESIDADSPIYDIRNEAIKTFEAEGFPTKKLENWKYTSLNSILKEDY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSD 162
++LD Q+ +V +DG S+ DG+ V ++ +S
Sbjct: 62 NIFPSKEAALDFKDVKQYFLNDVDTYKIVFVDGVY--SSFLSETTHDGIDVCTMGAALSK 119
Query: 163 GIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVP----------------------- 198
K+V D + ++ G+ S+N A D IY+P
Sbjct: 120 PKYKQVIDVYFNKIAKGESMDSLNTAFAKDGAYIYIPKGKVAQKPIQIVHFATGANEAMM 179
Query: 199 --------AEGN--------------DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
AE N N V E+ K V + +QN +L+A+ +
Sbjct: 180 LQPRNLIVAEENSEVQIIERHQSLTDKKVLTNVVTEIFADKRALVDYYKIQNDNLSASLV 239
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
T + Q S + S GG ++R+N++ Q G ++ L ++ Q D ++ +
Sbjct: 240 DTTEIEQHKESIVSVHTFSLGGNITRNNLNFYQKGEYMDSILKGITIIEGKQHVDHNTLV 299
Query: 297 LLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVK 355
P Q +K I A S+G VF+G V V + AQ+T+A Q ++LL+ AT+N K
Sbjct: 300 HHITPNCESHQDYKGIFADKSVG--VFNGKVVVEKEAQKTNAYQSNNNILLDDTATINSK 357
Query: 356 PNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
P L+I ADDV+CSHG I L+ES LFY Q+RGI + R L+++F V+ P +
Sbjct: 358 PQLEIFADDVRCSHGCTIGQLDESALFYLQSRGIGEKEGRALLMYAFANTVLSSVKIPQL 417
Query: 416 RNQVVSHVKNLMG 428
+ ++ + +G
Sbjct: 418 KERITKLIAKKIG 430
>gi|334122242|ref|ZP_08496283.1| FeS assembly protein SufD [Enterobacter hormaechei ATCC 49162]
gi|333392353|gb|EGK63457.1| FeS assembly protein SufD [Enterobacter hormaechei ATCC 49162]
Length = 423
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENTTLRINSLAMPVKAEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALSDGGLKQQVLARI 414
>gi|90019231|gb|ABD84267.1| ABC-type transport system-like [Yersinia sp. MH-1]
Length = 180
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 99/169 (58%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RHN Q G ++S L + + D +R L+H +GYC RQLHK +V
Sbjct: 8 GAGLTRHNTSAQLNGEGASLSMNSLLLPIGREVCD--TRTYLEHNKGYCESRQLHKTVVR 65
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 66 ER-GKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVG 124
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++ QLFY Q+RGI A++ ++F+F AE+ E +IR V+ +
Sbjct: 125 RIDAEQLFYLQSRGISQADAQQMIIFAFAAELTEAMSNETIRKLVMERI 173
>gi|392978732|ref|YP_006477320.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392324665|gb|AFM59618.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 423
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALDDGLLKQQVLARI 414
>gi|333982946|ref|YP_004512156.1| FeS assembly protein SufD [Methylomonas methanica MC09]
gi|333806987|gb|AEF99656.1| FeS assembly protein SufD [Methylomonas methanica MC09]
Length = 433
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 57/395 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD--AQFP- 129
LQ+ R + + +P+ +DE +R+T+ +++ + + PS + DV D A +
Sbjct: 29 LQQFRSEGLKAFETHGFPNPRDEEWRYTNLAVLNKT----LFAPSDNQDVDADWLAAYRL 84
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSL--------------LG------------ 159
S+VL++G + LS LP V V S+ LG
Sbjct: 85 ENAWSVVLVNGRFSAALSRLSGLPAAVSVQSVSTALRNNPSVLETRLGKAVGNDEHSLVA 144
Query: 160 -----VSDGIMKRVS---DFISEFQCGDLFWSINGMGAP-DLGVIYVPAEGN-------- 202
+DG++ ++ Q + S + + A +L V+ AE
Sbjct: 145 FNSAWFADGVVIEIAANQRLAKPLQIVHVVTSPDALAASRNLFVLEQGAEAEIVETYIGS 204
Query: 203 -DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
Y++ +V E + + + S +Q ++ A H T V+Q S + GG L+
Sbjct: 205 AASYFSAAVNECFLEQNAGLTLSKMQVEADKACHFGGTYVKQAHHSRLLHHNFAFGGLLA 264
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R ++H L +E ++ +L + Q D H+R+ P+G R+ +K ++ + + V
Sbjct: 265 RTDIH-SDLDLASECRVNGLYLGANRQHIDNHTRINHLKPQGISREFYKGVLDNR-ARGV 322
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G V V AQQTD+ R+LLL A V+ KP L+I ADDVKCSHG + LE+ +
Sbjct: 323 FQGRVIVVEDAQQTDSEMNNRNLLLSADAEVDTKPQLEIYADDVKCSHGVTVGQLEDKSV 382
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
FY Q+RG+D E+AR L F+F E++++ P ++
Sbjct: 383 FYLQSRGVDEESARNILTFAFANEMVDKVENPELK 417
>gi|345868944|ref|ZP_08820907.1| feS assembly protein SufD [Bizionia argentinensis JUB59]
gi|344046428|gb|EGV42089.1| feS assembly protein SufD [Bizionia argentinensis JUB59]
Length = 437
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 1/222 (0%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
NSV E+ K V + +QN + NA+ I T V Q+ S + S GGKL+R+N+
Sbjct: 210 TNSVTEIYSNKRAIVDYYKIQNDNENASLIDNTFVNQKRESHSSVHTFSFGGKLTRNNLS 269
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 326
Q G ++ L ++ Q D ++ + P Q +K I A S VF+G V
Sbjct: 270 FFQNGERIDSTLKGVTIIGKKQHVDHNTLVHHIEPNCESHQDYKGIYADS-SSGVFNGKV 328
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
V++ AQ+T+A Q ++LL +A++N KP L+I ADDVKC+HG I L+ES +FY ++
Sbjct: 329 LVSKEAQKTNAFQANNNILLSDKASINTKPQLEIFADDVKCTHGCTIGQLDESAMFYMRS 388
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
RGI + A+ L+F+F V+ P I+ ++ + N +G
Sbjct: 389 RGIPEKEAKALLMFAFSNNVLSSVKIPEIKERITKIIANKLG 430
>gi|86157272|ref|YP_464057.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773783|gb|ABC80620.1| Iron-regulated ABC transporter permease protein SufD
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 437
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 1/207 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D Y ANSV E+V+G+G ++ H LQ++ A H+ Q S ++ GG+L+
Sbjct: 202 GDTYLANSVTELVLGEGAEIEHLRLQDEGARAFHVSALFAEQAARSRLAAHGLALGGQLA 261
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R V + G E +S ++ +T D + + PR + +K I+ + V
Sbjct: 262 RSEVRARLAGEGAELAVSGLYMADGARTTDAFTWVEHAVPRCTTTETYKGIL-DGRARGV 320
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V AQ+T A Q+ +LLL A V+ KP L+I ADDVKC HG + L+E+ L
Sbjct: 321 FAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKPQLEIFADDVKCGHGGTVGQLDEAAL 380
Query: 382 FYFQARGIDLETARKALVFSFGAEVIE 408
FY ++RG++ AR L+++F AE+++
Sbjct: 381 FYLRSRGVEEAEARSLLIWAFAAEMVD 407
>gi|296102713|ref|YP_003612859.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057172|gb|ADF61910.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 423
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALDDGLLKQQVLARI 414
>gi|320539151|ref|ZP_08038822.1| putative truncated component of SufBCD complex [Serratia symbiotica
str. Tucson]
gi|320030789|gb|EFW12797.1| putative truncated component of SufBCD complex [Serratia symbiotica
str. Tucson]
Length = 400
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RHN Q GP ++S L + + D +R LDH +GYC RQ+HK +V+
Sbjct: 188 GAGLTRHNTSAQLNGPGANLAINSLVLPIGKEVCD--TRTYLDHNQGYCESRQMHKTVVS 245
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 246 DG-AKAVFNGMINVAKHAIKTDGQMTNHNLLLGKAAEVDTKPQLEIYADDVKCSHGATVG 304
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++ +QLFY Q+RGID A++ ++F+F AE+ ++R V++ +
Sbjct: 305 RIDVAQLFYMQSRGIDKHAAQQMIIFAFAAELTANIANETLREWVLARI 353
>gi|220916009|ref|YP_002491313.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953863|gb|ACL64247.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
Length = 437
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
+D Y ANSV E+V+G+G ++ H LQ++ A H+ Q S ++ GG+L+
Sbjct: 202 SDTYLANSVTELVLGEGAEIEHLRLQDEGARAFHVSALFAEQAARSRLTAHGLALGGQLA 261
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R V + G E +S ++ +T D + + PR + +K I+ + V
Sbjct: 262 RSEVRARLAGEGAELAVSGLYMADGARTTDAFTWVEHAVPRCTTTETYKGIL-DGRARGV 320
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V AQ+T A Q+ +LLL A V+ KP L+I ADDVKC HG + L+E+ L
Sbjct: 321 FAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKPQLEIFADDVKCGHGGTVGQLDEAAL 380
Query: 382 FYFQARGIDLETARKALVFSFGAEVIE 408
FY ++RG++ AR L+++F AE+++
Sbjct: 381 FYLRSRGVEEAEARSLLIWAFAAEMVD 407
>gi|86750108|ref|YP_486604.1| FeS assembly protein SufD [Rhodopseudomonas palustris HaA2]
gi|86573136|gb|ABD07693.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris HaA2]
Length = 437
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 148/313 (47%), Gaps = 17/313 (5%)
Query: 119 SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
SL + DA L+ +D +ALN + + DGV ++ V+DG I G
Sbjct: 122 SLRDALDAGDDRLLSLDNANPMTALNTALMTDGV----VIEVADGAKPARPLHILHIASG 177
Query: 179 DL--------FWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 230
SI A + YV +EG Y + + IG G ++ H L S
Sbjct: 178 GAPAAMFTRSLISIGNNAAATVVESYVASEGAGVYQVHDAAVIAIGDGARLDHVRLIEDS 237
Query: 231 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 290
A I VR + Y +V ++TG +SR++ V G + E + +LL Q
Sbjct: 238 REAFSIAAAEVRVGAHAHYNVVGIATGALVSRYSSTVTIAGEHAQVETNGVNLLNGKQHA 297
Query: 291 DLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEP 348
D + L+++H +C R+ + VA G +VF G + V + AQQTDA +TR+LLL
Sbjct: 298 D--TTLVMNHDVPHCVSREGFRA-VADDRGHSVFQGRINVRQPAQQTDAKMMTRALLLSD 354
Query: 349 RATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
A + KP L+I ADDV C HGAAI L++ LFY +ARG+ + A L+ +F E IE
Sbjct: 355 EAEADNKPELEIFADDVTCGHGAAIGALDDQLLFYLRARGLAEKEAEALLIQAFVGEAIE 414
Query: 409 RFPYPSIRNQVVS 421
++R +
Sbjct: 415 AIADDNLRELAIG 427
>gi|392964323|ref|ZP_10329744.1| FeS assembly protein SufD [Fibrisoma limi BUZ 3]
gi|387847218|emb|CCH51788.1| FeS assembly protein SufD [Fibrisoma limi BUZ 3]
Length = 441
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 122/218 (55%), Gaps = 5/218 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ ++N+V E+V+ + + ++ +QN+S A HI T V Q S + V+ G
Sbjct: 214 GDRSSFSNAVTEIVVEQDARAQYYKVQNESEAAYHIGTTQVYQADNSHFYSATVTLNGNF 273
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
R+N+++ G E + ++ Q D H+ L+DH P Y +L+K I+ S G
Sbjct: 274 VRNNLNIVLNGQHCEAFMYGLYMPNGRQHVDNHT--LVDHAMPNSYSNELYKGILDDS-G 330
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
VF+G + V AQ+T+A Q ++++L P A++N KP L+I ADDVKCSHG L+E
Sbjct: 331 TGVFNGKIFVRPDAQKTNAYQSCKNVVLSPNASMNTKPQLEIFADDVKCSHGTTTGKLDE 390
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
LFY ++RGI + A+ L+++F +V+ + IR
Sbjct: 391 EALFYMRSRGIPKDEAKTLLMYAFAEDVLSQIKIDPIR 428
>gi|116073823|ref|ZP_01471085.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
gi|116069128|gb|EAU74880.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
Length = 420
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 1/202 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
VLE+ +G+ +VRH + +A+ + AV QE S YE V+ G +L R V Q
Sbjct: 202 VLELHLGQEARVRHGLVALGGGDASLLGHLAVEQEPRSTYEFTSVAKGWQLGRLEPRVVQ 261
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
+ T L L +DQ H+ + + G QL K + A ++F+G V+V
Sbjct: 262 VDGHASTVLKGLVLTDADQQFATHTAMRFEGEDGQLDQLQKSVAA-GRSHSIFNGAVQVP 320
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+TDA QL+R+LLL RA V+ KP L+I+ADDV+C+HGA ++ L+E +LFY ++RGI
Sbjct: 321 RAAQRTDAAQLSRNLLLSDRARVDAKPELEIVADDVRCAHGATVTQLQEDELFYLRSRGI 380
Query: 390 DLETARKALVFSFGAEVIERFP 411
TA L+ + +V++ P
Sbjct: 381 SAATAAALLLRGYCQDVVDLLP 402
>gi|197121305|ref|YP_002133256.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
gi|196171154|gb|ACG72127.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
Length = 439
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 1/207 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D Y ANSV E+V+G+G ++ H LQ++ A H+ Q S ++ GG+L+
Sbjct: 204 GDTYLANSVTELVLGEGAEIEHLRLQDEGARAFHVSALFAEQAARSRLTAHGLALGGQLA 263
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R V + G E +S ++ +T D + + PR + +K I+ + V
Sbjct: 264 RSEVRARLAGEGAELAVSGLYMADGARTTDAFTWVEHAVPRCTTTETYKGIL-DGRARGV 322
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V AQ+T A Q+ +LLL A V+ KP L+I ADDVKC HG + L+E+ L
Sbjct: 323 FAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKPQLEIFADDVKCGHGGTVGQLDEAAL 382
Query: 382 FYFQARGIDLETARKALVFSFGAEVIE 408
FY ++RG++ AR L+++F AE+++
Sbjct: 383 FYLRSRGVEEAEARSLLIWAFAAEMVD 409
>gi|395233613|ref|ZP_10411852.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
sp. Ag1]
gi|394731827|gb|EJF31548.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
sp. Ag1]
Length = 426
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 252 GAAVLRHNTSTQLNGENNQLHINSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 309 RDKGRAVFNGMIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIG 368
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI + A++ ++F+F AE+ E +++ QV++ +
Sbjct: 369 RIDDEQMFYLRSRGISEQAAQQMIIFAFAAELTESIRDEALKQQVLARI 417
>gi|399546249|ref|YP_006559557.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
gi|399161581|gb|AFP32144.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
Length = 433
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 181/410 (44%), Gaps = 57/410 (13%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L S+ +LP+PL LR + + L P+RK E ++++ + + + ++S
Sbjct: 12 LQSAGQALPKPLL--ALRANRASALTGLLLPTRKTENWKYSAKHLKLTDDMASSLPLNAS 69
Query: 120 LDVSTDAQFPSLVLIDGFIQNSALNLSNLP-------------DGVYVGSLLG--VSD-- 162
D Q ++VL++G ++ A N L D LLG +SD
Sbjct: 70 AGAEADIQGYTVVLVNGVVRPEASNYPALKGLSIQRFSDLDGDDAELAVDLLGKSISDQP 129
Query: 163 ---GIMKRVSDFISEFQCGDL------------FWSINGMGAPDLG----VIYVPA---- 199
G + S + F+ G L + I+ A G I V A
Sbjct: 130 AKHGSINLTSLNAARFEDGLLIQLQPGTVLDQPLFVIHHTSASHSGSAFPCILVAAGSNS 189
Query: 200 ----------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G N+ E +G G + L + N H+ T VRQ+ S +
Sbjct: 190 QLTLVEDYVSSGESPVMVNTATEFSLGDGANITSVRLNTEGQNVQHMGTTGVRQQRNSRF 249
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 307
E V GG L RH++HV+ G E +L+ ++V+ TQ + ++H +C +
Sbjct: 250 ESHSVGFGGTLRRHDLHVRLEGEGGECKLNG--VVVTQGTQHYDNHTTIEHVAAHCNSEE 307
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
++ I A A+F+G + +++ AQ+++A ++LLL A +N KP L+I ADDVKC
Sbjct: 308 SYRNIAADK-SHAIFNGRIHIHQDAQKSNANMSNKNLLLTNGAEINTKPELEIYADDVKC 366
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
+HGA I L+ +FY +RG+ A+ L +F E++ + P +RN
Sbjct: 367 AHGATIGQLDNESIFYLVSRGLSRRDAKVLLTMAFINELVAQIPVELVRN 416
>gi|401763371|ref|YP_006578378.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400174905|gb|AFP69754.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 422
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 248 GGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 305
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 306 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 364
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E ++ QV++ +
Sbjct: 365 RIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALHDGVLKQQVLARI 413
>gi|305665682|ref|YP_003861969.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
gi|88710440|gb|EAR02672.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
Length = 438
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 195/434 (44%), Gaps = 62/434 (14%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ +R + + +PS+KDE +++T ++
Sbjct: 3 LKDKLVSSFMAFENKVDVEHPVHDIRSEAIKNFEEKGFPSKKDEAWKYTSLKGLQKIDFS 62
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSDG 163
+ ++L+ +F +V IDG I +S L+ DGV + + ++
Sbjct: 63 IFPKEVNALEYKDVKKFFLHEIESYKIVFIDG-IYSSFLS-ETTHDGVDICLMSAALTKP 120
Query: 164 IMKRVSD-FISEFQCGD-LFWSINGMGAPDLGVIYVP--------------AEGNDC--- 204
+ K+V D + ++ D ++N + + IY+P + GN+
Sbjct: 121 MYKQVIDVYFNKIASKDETLTTLNTAFSREGAYIYIPKNKMPKKPIEILYFSTGNEASLM 180
Query: 205 ----------------------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
N+V E+ + + + +QN S A+ I
Sbjct: 181 LQPRSLVVVEENAEVQIIERHQSLTSNEVLTNAVTEIFAAENSIIDYYKVQNDSKTASLI 240
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
T + Q++ S ++ S GGKL+R+N++ Q G ++ + +L Q D H+ +
Sbjct: 241 DNTYINQKSKSVVKVHTFSFGGKLTRNNLNFYQNGEHIDSTMKGVTILGYKQHVDHHTLV 300
Query: 297 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
P Q +K I + VF+G + V++ AQ+T+A Q ++L+ +AT+N KP
Sbjct: 301 HHIEPNCESHQDYKGIYGEN-STGVFNGKIIVDKIAQKTNAFQQNNNILISDKATINTKP 359
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
L+I ADDVKCSHG I L+E LFY Q+RGI + AR L+++F V+ P ++
Sbjct: 360 QLEIFADDVKCSHGCTIGQLDEDALFYLQSRGIPKKEARALLMYAFANNVLASVLIPELK 419
Query: 417 NQVVSHVKNLMGTT 430
+++ + +G +
Sbjct: 420 SRINKLIAEKLGVS 433
>gi|347760112|ref|YP_004867673.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
xylinus NBRC 3288]
gi|347579082|dbj|BAK83303.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
xylinus NBRC 3288]
Length = 423
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y N + ++ +G+ G + H+ +Q + A H+ + R Y+ ++ GG L
Sbjct: 193 GQGDYLHNPLYDITVGEDGHLSHARVQAEGDQAIHLAVSHARIAATGLYDSFTLTLGGSL 252
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQ 319
SRH VH + P ++ LL Q DL S + P RQ K +++ H+ G
Sbjct: 253 SRHEVHARLTAPRACVHVNGAQLLGGRQHGDLTSVITHAAPECTSRQTVKNVLSDHARG- 311
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
VF G + V R AQ+TD Q+ ++LLL A ++ KP L+I ADDVKCSHGA + L++
Sbjct: 312 -VFQGKIHVERIAQKTDGYQMNQALLLSDSAEIDAKPELEIYADDVKCSHGATVGALDDD 370
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
QLFY ++RGI AR L+ +F +V+++ +++ +
Sbjct: 371 QLFYLRSRGISGVVARSILIRAFLHDVVDQITDQRLKDSL 410
>gi|365970160|ref|YP_004951721.1| FeS cluster assembly protein sufD [Enterobacter cloacae EcWSU1]
gi|365749073|gb|AEW73300.1| FeS cluster assembly protein sufD [Enterobacter cloacae EcWSU1]
Length = 436
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V Q D +R L+H +GYC RQLHK IV+
Sbjct: 262 GGAVLRHNTSTQLNGENTTLRINSLAMPVKTQVCD--TRTWLEHNKGYCNSRQLHKTIVS 319
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 320 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 378
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A++ ++++F AE+ E ++ QV++ +
Sbjct: 379 RIDDEQMFYLRSRGIDQQAAQQMIIYAFAAELTEALHDGLLKQQVLARI 427
>gi|149278439|ref|ZP_01884576.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
gi|149230809|gb|EDM36191.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
Length = 435
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 115/214 (53%), Gaps = 1/214 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
++N+V+EVV+ + + + LQN + + + + T + Q S V +S G L R+N+
Sbjct: 212 FSNAVMEVVVAQDAFLEYYKLQNDAAHTSQVSSTHIHQTGKSHVHTVTISLNGGLLRNNL 271
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
++ ET L LL D H+ + HP + QL+K I A VF G
Sbjct: 272 NMILDAEGNETHLYGLSLLKGKTHVDNHTLIDNKHPNCFSNQLYKNI-ADDAATGVFSGR 330
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V AQ+T+A Q ++++L +AT+N KP L+I ADDVKCSHG + L+E LFY +
Sbjct: 331 IIVQPDAQKTNAYQSNKNIILSDQATINAKPQLEIFADDVKCSHGCTVGQLDEEALFYLR 390
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
ARGI E A L+ +F +++E+ +R +
Sbjct: 391 ARGISRELAEVLLLQAFATDIVEQVKIEPLRQHI 424
>gi|85817042|gb|EAQ38226.1| FeS assembly protein SufD [Dokdonia donghaensis MED134]
Length = 437
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 191/432 (44%), Gaps = 61/432 (14%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+D L S+ L + + P+ +R+ + +T + +P++K E +++T + I
Sbjct: 2 SLKDKLVSNHIVLQESIDADSPIYGIRNEAIKTFEAEGFPTKKLENWKYTSLNSILKEDY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSD 162
++LD Q+ +V +DG + +S L+ DG+ V ++ ++
Sbjct: 62 NIFPSKEAALDFKDVKQYFLNDIDTYKIVFVDG-VYSSYLS-ETTHDGIDVCTMGAALTK 119
Query: 163 GIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVP----------------------- 198
K+V D + ++ G+ ++N A D IY+P
Sbjct: 120 PKYKQVIDVYFNKIAKGESMDALNTAYAKDGAYIYIPKGKVAQKPIQIVHFSTGTNDAMM 179
Query: 199 --------AEGN--------------DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
AE N N V E+ K V + +QN L+A+ I
Sbjct: 180 LQPRNLIVAEENSEVQIIERHQSLSEKKVLTNVVTEIFADKRALVDYYKIQNDKLDASLI 239
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
T + Q S + S GG ++R+N++ Q G ++ L ++ Q D ++ +
Sbjct: 240 DTTEIEQHKESIVSVHTFSLGGNITRNNLNFYQKGEYMDSILKGVTIIEGKQHVDHNTLV 299
Query: 297 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
P Q +K I A VF+G V V + AQ+T+A Q ++LL+ AT+N KP
Sbjct: 300 HHITPNCESHQDYKGIFAEK-STGVFNGKVVVEKEAQKTNAYQSNNNILLDDTATINSKP 358
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
L+I ADDV+CSHG I L+ES LFY Q+RGI + R L+++F V+ P ++
Sbjct: 359 QLEIFADDVRCSHGCTIGQLDESALFYLQSRGIGEKEGRALLMYAFANTVLSSVKIPQLK 418
Query: 417 NQVVSHVKNLMG 428
++ + +G
Sbjct: 419 TRITKLIAKKIG 430
>gi|226228435|ref|YP_002762541.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
gi|226091626|dbj|BAH40071.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
Length = 438
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 1/211 (0%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y+ N+V+EV + G ++ +Q +S +A H+ RQ S + TG LSR N
Sbjct: 210 YFTNAVVEVFVEDGATLQLVRIQRESRSAQHVGTVEARQGRDSHFFAFTFQTGAALSRSN 269
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
++ G ++ ++L Q D +R+ P + R+ +K ++ VF+G
Sbjct: 270 IYTVLAGEGCGCTINGLYMLGGQQHGDHQTRVEHVAPNCFSREQYKGLLDER-SHGVFNG 328
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
V V+ AQ+TD Q +LLL A ++ KP L+I ADDVKC+HGA + ++E+ LFY
Sbjct: 329 KVYVHPEAQKTDGKQTNNTLLLSQDAQIDTKPQLEIFADDVKCTHGATVGRIDETALFYL 388
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSI 415
++RG+ AR+ L+++F A+V+E P I
Sbjct: 389 KSRGVSAGLARQLLMYAFAADVLETIDVPVI 419
>gi|414167004|ref|ZP_11423234.1| FeS assembly protein SufD [Afipia clevelandensis ATCC 49720]
gi|410892282|gb|EKS40077.1| FeS assembly protein SufD [Afipia clevelandensis ATCC 49720]
Length = 440
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 190/432 (43%), Gaps = 72/432 (16%)
Query: 50 IQLAESLEDSL----PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
+ L +S D+L ++ S LP P+ ++R ++ + P R+ E +++TD +
Sbjct: 3 VALVQSTTDALGELFAAARSRLPGSGPVAEVRQNAFDDFVRRGLPHRRIEEWKYTDLRAL 62
Query: 106 KSSQIQPI---------TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGS 156
++ P+ TR + ++ LVL+DG +++ L GV++ +
Sbjct: 63 LR-EVAPLAAAPDQADLTRAAKAIKALGIENTQKLVLVDGVFTPQLSDVTTLEAGVHLRT 121
Query: 157 LLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI-------------------- 195
L V DG K +D + D S+N A D GV+
Sbjct: 122 LREVLEDGGNKVRADLLQTSVASDAMISLNAALATD-GVVVDVAEGVTLTKPIHIVHVAT 180
Query: 196 -------------------------YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 230
+V AEG Y + + + IG +++H L +
Sbjct: 181 DSGTSLVTRSLLKLAKGAQATLVESFVAAEGAKSYQTHDSVVIWIGDEAELQHVRLMEDA 240
Query: 231 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 290
L+AAH+ + ++ GG +SR+ ++ G +E + +LL + +
Sbjct: 241 LDAAHVTTGIFTIGAKAKLNTFNLTNGGSVSRYQGFIRFAGEGSELTTNGVNLLGARRHG 300
Query: 291 DLHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLL 345
D + L++DH +C R++ + ++ AHS VF G + V AQ+TD +TR+LL
Sbjct: 301 D--TTLVVDHAVPHCSSREVFRAVLDDRAHS----VFQGRIIVQPDAQKTDGKMMTRALL 354
Query: 346 LEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAE 405
L A + KP L+I ADDV C HGA L+ES LFY +ARG+ + A+ L+ +F E
Sbjct: 355 LSDEAEADSKPELEIFADDVTCGHGATAGALDESLLFYLRARGLPEKEAQALLIAAFVGE 414
Query: 406 VIERFPYPSIRN 417
IE ++R+
Sbjct: 415 AIESIVDDNLRD 426
>gi|78183985|ref|YP_376420.1| ABC transporter, membrane component [Synechococcus sp. CC9902]
gi|78168279|gb|ABB25376.1| ABC transporter, membrane component [Synechococcus sp. CC9902]
Length = 397
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 109/206 (52%), Gaps = 1/206 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
++EV +G+ + H L AA AV QE S Y V G L R V Q
Sbjct: 179 LMEVHLGQEAQFNHGVLACADGVAALFAQLAVEQEPRSTYNFTSVIQGWSLGRIEPRVVQ 238
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
+ T L + +Q +H+ + + P G QL KC+ A +F+G + V
Sbjct: 239 VDGQASTTLKGLAVADLEQQLAVHTSVCFEGPDGELDQLQKCLAA-GRSHTIFNGAINVP 297
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+T+A QL+R+LLL RA V+ KP L+I+ADDV+C+HGA +S L+E +LFY ++RGI
Sbjct: 298 RKAQRTNAAQLSRNLLLSDRARVDTKPELEIVADDVRCAHGATVSQLQEDELFYLRSRGI 357
Query: 390 DLETARKALVFSFGAEVIERFPYPSI 415
A L+ EV++R P ++
Sbjct: 358 GASDAAALLLRGACQEVVDRLPTHAL 383
>gi|13470345|ref|NP_101911.1| hypothetical protein mlr0020 [Mesorhizobium loti MAFF303099]
gi|14021084|dbj|BAB47697.1| mlr0020 [Mesorhizobium loti MAFF303099]
Length = 430
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 190/427 (44%), Gaps = 56/427 (13%)
Query: 29 NKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTP 88
K+++ T PQ T ++ +I D+ S LP + RD + + +
Sbjct: 4 GKVKLMNMHTQPQRTPAETALI-------DAFGDRLSLLPGDGAVMLKRDDAIEAI-KHG 55
Query: 89 WPSRKDEPFRFTDTSMIKS-----------SQIQPITRPSSSLDV---STDAQFPSL--- 131
P+R+ E + +TD + S I PI S+ L V +DA+ P+L
Sbjct: 56 LPTRRVESWHYTDLRRLLSVVPDFDPAAMAKAIAPIVEGSAVLPVLNGKSDAKVPALDGV 115
Query: 132 -------VLIDGFIQNS-----------ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
LIDG I ALN + + DG +V ++DG +
Sbjct: 116 TVQSLSEKLIDGSIAPGLDSYGSDDAIGALNTAFVADGYFVD----IADGTELEKPIELQ 171
Query: 174 EFQCGD---LFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 230
Q G + ++ +GA VI G+ +SV ++V+G+ +V +Q Q
Sbjct: 172 NVQAGGQTHVRLAVR-VGAGAKAVIVERQAGDGAALVSSVSQLVLGEDAEVTWLIVQEQP 230
Query: 231 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 290
A H+ + L ++ GGKL R V V+ G + +L +LL D
Sbjct: 231 DTATHLAQFKAHIGKNAKLTLFVMNAGGKLVRQEVMVKTTGEGADFKLRGINLLAGDTHS 290
Query: 291 DLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEP 348
D+ ++LDH P ++ + +V + VF G + V++YAQ+T+A +LLL
Sbjct: 291 DV--TMVLDHAVPHTTSTEVIRNVVTGK-ARGVFQGRINVHQYAQKTNAKMACNTLLLSD 347
Query: 349 RATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
+ KP L+I ADDV C HGA +++++ LFY ARG+D ++AR LV +F AEVIE
Sbjct: 348 DGEFSTKPELEIFADDVVCGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIE 407
Query: 409 RFPYPSI 415
+I
Sbjct: 408 ELDDETI 414
>gi|399030740|ref|ZP_10731071.1| FeS assembly protein SufD [Flavobacterium sp. CF136]
gi|398071139|gb|EJL62409.1| FeS assembly protein SufD [Flavobacterium sp. CF136]
Length = 438
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 5/223 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +QN ++ A I T V Q+ S + S GG L+R+N++
Sbjct: 212 NSVTEIFAQKRAIVDYYKIQNDNIEANLIDNTYVSQQQESHVYVHTFSFGGNLTRNNLNF 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGN 325
G + L+ ++ Q D ++ L++H C Q +K I + VF+G
Sbjct: 272 YHFGERLTSTLNGITIIGEKQHVDHYT--LVNHATPNCESFQDYKGIFSDR-STGVFNGK 328
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V + AQ+T+A Q + ++LL +AT+N KP L+I ADDVKCSHG + L+E+ +FY Q
Sbjct: 329 VLVEKEAQKTNAFQKSNNILLSDKATINAKPQLEIFADDVKCSHGCTVGQLDETAMFYMQ 388
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+RGI + A+ L+++F VIE P ++ ++ + N +G
Sbjct: 389 SRGIPKKEAKALLMYAFSNAVIESIKIPELKQRITKIIANKLG 431
>gi|429093380|ref|ZP_19155976.1| Iron-sulfur cluster assembly protein SufD [Cronobacter dublinensis
1210]
gi|426741792|emb|CCJ82089.1| Iron-sulfur cluster assembly protein SufD [Cronobacter dublinensis
1210]
Length = 424
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 201/421 (47%), Gaps = 66/421 (15%)
Query: 60 LPSSSSSLPQPLPL---------QKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQ 109
LP+SS++L Q L ++ RD Q LL P+RK E +++T ++K
Sbjct: 4 LPNSSNALQQWHRLFEAQGGERSEEARDHLQQ-LLRLGLPTRKHENWKYTPLDGLLKHDF 62
Query: 110 I----QPITRPS-SSLDVSTDAQFPSLVLIDGFI--------QNSALNLS------NLPD 150
+ QP+ R + +L + DA LV +DG NS +++ LP
Sbjct: 63 VTPAPQPLERAAFDALALPVDAL--RLVFVDGRFAPELSDATDNSGFDITVSDSRRGLPA 120
Query: 151 GVYVGSLLGVSDGIMKRVSDF----------------ISEFQCGDLFWSIN-------GM 187
V + L +++ + + V+ IS + GD +++
Sbjct: 121 PVQPEAFLHLTESLAQSVTHIRVARNQQPSKALLLMHISAGRAGDEINTVHYRHHLELAE 180
Query: 188 GAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQE 244
GA + + + ++ + L + +G + H L + S + AH A +
Sbjct: 181 GAQATVIEHYVSRDEQPHFTGARLTLQVGANATLNHYKLAFENPASWHFAHNDLIAAQDA 240
Query: 245 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 304
A+ + G + RHN Q G + ++S L V+++ D +R L+H +GY
Sbjct: 241 HAASSSYL---LGAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGY 295
Query: 305 C--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA 362
C RQLHK IV G+AVF+G +KV ++A +TD +LLL A V+ KP L+I A
Sbjct: 296 CNSRQLHKTIV-RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYA 354
Query: 363 DDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSH 422
DDVKCSHGA + +++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++
Sbjct: 355 DDVKCSHGATVGRIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLAR 414
Query: 423 V 423
+
Sbjct: 415 I 415
>gi|365961626|ref|YP_004943193.1| FeS assembly protein SufD [Flavobacterium columnare ATCC 49512]
gi|365738307|gb|AEW87400.1| FeS assembly protein SufD [Flavobacterium columnare ATCC 49512]
Length = 438
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 3/224 (1%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NSV EV K V + +QN +A I T + Q+ S + S GG ++R+N+
Sbjct: 210 FTNSVTEVFAQKRAIVDYYKIQNDLQSANLIDNTYIAQKQESRVSVHTFSFGGNITRNNL 269
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDG 324
+ G ++ L ++ Q D ++ + P Q +KCI+ H+ G VF+G
Sbjct: 270 NFYHQGERIDSTLKGITIIGDKQHVDHYTLVQHAQPNCESHQNYKCILDDHATG--VFNG 327
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V + AQ+TDA Q ++LL +A++N KP L+I ADDVKCSHG I L+ES LFY
Sbjct: 328 KIYVEKEAQKTDAFQQNNNVLLSEKASINAKPQLEIFADDVKCSHGCTIGQLDESALFYM 387
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Q RGI + A+ L+++F +EV P ++ ++ + + +G
Sbjct: 388 QQRGIPKKEAKALLMYAFTSEVTSSIKIPELKEKIGKIIASKLG 431
>gi|319784071|ref|YP_004143547.1| FeS assembly protein SufD [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169959|gb|ADV13497.1| FeS assembly protein SufD [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 422
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 182/403 (45%), Gaps = 53/403 (13%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD------------- 101
+L D+ S LP + RD + +T+ P+R+ E + +TD
Sbjct: 15 ALIDAFGDRLSLLPGDGAVMLKRDDAIETI-KHGLPTRRVESWHYTDLRRLLNTVPDFDP 73
Query: 102 TSMIKSSQIQPITRPS---SSLDVSTDAQFPSL----------VLIDGFIQNS------- 141
+M K+ I PI S S L+ +DA+ P L L+DG
Sbjct: 74 AAMAKA--IAPIVDGSTVVSILNGKSDAKVPVLEGVSFQRLSETLVDGSAAAGLDPYGSD 131
Query: 142 ----ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD---LFWSINGMGAPDLGV 194
ALN + + DG +V ++DG+ + Q G + + +GA V
Sbjct: 132 DAIGALNTAFVADGYFVD----IADGVELEKPVELQNLQAGGQTHVRLPVR-VGAGAKAV 186
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
I G+ +SV ++V+G+G +V +Q Q A H+ + L +
Sbjct: 187 IVERQTGDGAALGSSVSQLVLGEGAEVTWLIVQEQPETATHLAQFKAHIGKNAKLTLFVM 246
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCI 312
+ GG+L R + V+ G + +L +LL D D+ ++LDH P ++ + +
Sbjct: 247 NAGGRLVRQEIMVRTTGEGADFKLRGINLLAGDTHTDV--TMVLDHAVPHTTSTEIIRNV 304
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
V + VF G + V++YAQ+T+A +LLL + KP L+I ADDV C HGA
Sbjct: 305 VTGK-ARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVICGHGAT 363
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
+++++ LFY ARG+D ++AR LV +F AEVIE +I
Sbjct: 364 VTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDEAI 406
>gi|383765395|ref|YP_005444376.1| FeS cluster assembly protein SufD [Phycisphaera mikurensis NBRC
102666]
gi|381385663|dbj|BAM02479.1| FeS cluster assembly protein SufD [Phycisphaera mikurensis NBRC
102666]
Length = 445
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 168/401 (41%), Gaps = 60/401 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVSTDAQFPSL 131
L RD+ WP +++E +RFT+ + ++ + + S + Q P L
Sbjct: 27 LNPFRDAGRARFKELGWPGKRNESWRFTNLDKLAATNFVSAVDDAEVSDEALASFQVPGL 86
Query: 132 -----VLIDG-FIQNSALNLSNLPDGVYVGSL--------------LG------------ 159
V +DG F + + L GV V L LG
Sbjct: 87 DATLLVFVDGRFREELSDATGELEPGVLVLPLTEAICQHRDLVEPHLGRLTRETDDAFTA 146
Query: 160 -----VSDGIMKRVSDFISEFQCGDLFWSINGMGAP----DLGVIY-------------V 197
V +G+ RV D ++ + + G P G+I V
Sbjct: 147 LNNASVENGVFVRVQDGVAASKPVHVLSIATDAGEPVASHPRGLIIAGVASSVTVLEHAV 206
Query: 198 PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
EG N+ E+ +V H +L+ A H+ ++ + V G
Sbjct: 207 AVEGAGVSLTNAATEIFAADRARVEHYFLERDGREAFHVASLFAHLGESTDVKSHTVLLG 266
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAH 315
G L R+NV G D E ++ L V D Q L + + + H CR Q +K I+ +
Sbjct: 267 GSLVRNNVSPTLAGTDCECLING--LYVGDGHQHLDNVMRVHHAAQGCRSRQFYKGIL-N 323
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
+ VF G + V+ AQQTDA Q R+LLL A VN +P L+I ADDVKC+HG +
Sbjct: 324 GESRGVFTGRIVVDPVAQQTDAVQSNRNLLLSEGARVNARPQLEIFADDVKCTHGCTTGE 383
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
++ +FYF++RG+D ETAR L+++F AE +R +R
Sbjct: 384 VDPDAVFYFRSRGLDEETARAMLIYAFAAEGFQRMDLQPVR 424
>gi|429120272|ref|ZP_19180956.1| Cysteine desulfurase , SufS subfamily [Cronobacter sakazakii 680]
gi|426325338|emb|CCK11693.1| Cysteine desulfurase , SufS subfamily [Cronobacter sakazakii 680]
Length = 688
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 112/182 (61%), Gaps = 6/182 (3%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 108 GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 164
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 165 RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 224
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV-KNLMGTTDVS 433
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ + + G +S
Sbjct: 225 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARIGQRFAGGRGMS 284
Query: 434 FS 435
FS
Sbjct: 285 FS 286
>gi|153003773|ref|YP_001378098.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
gi|152027346|gb|ABS25114.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
Length = 437
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 5/215 (2%)
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
+++ EG Y N+V E+V+G+G +V H LQ++S A H+ A Q+ + +
Sbjct: 198 VFLGTEG--VYLTNAVTELVLGEGAEVEHLRLQDESRRAFHVGVVAAEQQARASLTAHAL 255
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV- 313
S GG+LSR + + +G + ++ ++ D S + PR + +K ++
Sbjct: 256 SLGGRLSRSELRTRLVGEQASVAANGLYMADGERLVDNFSWVEHVAPRCSTAETYKGVLD 315
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
HS G VF G ++V AQ+T A Q+ +LLL A V+ KP L+I ADDVKC HG +
Sbjct: 316 GHSRG--VFSGRIRVLPGAQKTVARQMNSNLLLSDDAVVDTKPQLEIFADDVKCGHGGTV 373
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
L+E+ LFY ++RG+ AR L+++F E++E
Sbjct: 374 GQLDEAALFYLRSRGVPAAEARGLLIYAFAGEMVE 408
>gi|329296200|ref|ZP_08253536.1| SufD [Plautia stali symbiont]
Length = 425
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 129/235 (54%), Gaps = 12/235 (5%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYL---QNQSLNAAHIKWTAVRQETASGYELV 252
YV G ++ + +G +++H+ L ++ S + AH R S +
Sbjct: 191 YVTLNGR-AHFTGARFTFAVGDNAQLKHTKLAFEESSSYHFAHNDIVIGRDAQVSSTSFL 249
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 310
G LSRHN +Q G +T+ L+S L V + D +R L+H +G+C RQLHK
Sbjct: 250 ---LGAGLSRHNTSLQLNGENTQLSLNSLVLPVGSEVAD--TRSYLEHNKGHCLSRQLHK 304
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
I + G++VF+G++KV ++A +TD +LLL A V+ KP L+I ADDVKCSHG
Sbjct: 305 TI-SRDKGRSVFNGHIKVAQHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHG 363
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
A I +++ Q+FY ++RGI + A++ L+ +F AE+ E ++R V+ + +
Sbjct: 364 ATIGRIDDEQMFYLRSRGIAEDAAQQMLIHAFAAELTEALEDDALRQVVLQRITD 418
>gi|401676078|ref|ZP_10808064.1| SufD Protein [Enterobacter sp. SST3]
gi|400216564|gb|EJO47464.1| SufD Protein [Enterobacter sp. SST3]
Length = 423
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E ++ QV+ +
Sbjct: 366 RIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALHDGQLKLQVLDRI 414
>gi|345298949|ref|YP_004828307.1| FeS assembly protein SufD [Enterobacter asburiae LF7a]
gi|345092886|gb|AEN64522.1| FeS assembly protein SufD [Enterobacter asburiae LF7a]
Length = 423
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G + ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENITLRINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E +++ QV+ +
Sbjct: 366 RIDDEQMFYLRSRGIDKQAAQKMIIYAFAAELTEALRDNALKQQVLERI 414
>gi|336249908|ref|YP_004593618.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
aerogenes KCTC 2190]
gi|334735964|gb|AEG98339.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
aerogenes KCTC 2190]
Length = 423
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RH+ + G ++ ++S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 249 GGAVLRHHTSTRLAGENSNLRINSLAMPVKNEVCD--SRTWLDHRVGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAKHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ QLFY ++RGID + A++ ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQLFYLRSRGIDQQAAQQMILYAFAAELTEAISDDALKQQVLARI 414
>gi|354723202|ref|ZP_09037417.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
mori LMG 25706]
Length = 423
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G +T ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GSAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIDRQAAQKMIIYAFAAELTEALHDGALKQQVLARI 414
>gi|429748337|ref|ZP_19281533.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 332 str.
F0381]
gi|429171246|gb|EKY12879.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 332 str.
F0381]
Length = 433
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 116/223 (52%), Gaps = 1/223 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V EV + K + + LQN L A+ I T + QE S + S GG L+R+N++
Sbjct: 209 NAVTEVFVAKDAFLDYYKLQNDRLTASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G E+ L +L Q D ++ + HP Q +K IV + VF+G +
Sbjct: 269 YHQGEYLESTLKGLSILKGSQHTDHYTLVNHAHPNCESHQDYKSIV-NDEATNVFNGKIM 327
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L + LFY Q+R
Sbjct: 328 VEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSDDSLFYLQSR 387
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GI + A L ++F V+E P++ + + + +G T
Sbjct: 388 GIGKKEASALLTYAFANTVLESVKIPALSAYINAIIAEKLGVT 430
>gi|402832459|ref|ZP_10881105.1| FeS assembly protein SufD [Capnocytophaga sp. CM59]
gi|402277249|gb|EJU26333.1| FeS assembly protein SufD [Capnocytophaga sp. CM59]
Length = 432
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 192/425 (45%), Gaps = 69/425 (16%)
Query: 55 SLEDSLPSSSSSLP-QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
+L+D ++ + P Q L+ +R + + +S +P +K E +++T ++++
Sbjct: 3 NLKDKWEAAFAQFPHQNDILKDIRQEALRFFVSNGFPHKKIEAWKYTSLDGVQATDYVLW 62
Query: 114 TRPSSSLDVSTDAQFPS-------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
+ ++ +A P LV ++GF +S ++ + + D V LL + + K
Sbjct: 63 QPTHAKKTLAAEALHPYRIEGSHLLVFVNGFF-SSEMSDAAVADFT-VTPLL---EALHK 117
Query: 167 RVSDFISEF-----QCGDLFWSINGMGAPDLGVIYVPAEGN-----------------DC 204
+DF+ ++ + GD+F ++N A + I VP +G C
Sbjct: 118 GGADFVGKYFNAATEKGDVFTALNTAYAAEGVYIEVP-KGKVVEKPIQLLYLSDVGTPTC 176
Query: 205 Y----------------------------WANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
+ N+V EV + K + + LQN +L A+ I
Sbjct: 177 FQPRNIISVGERAELKVIEMHHNLSQAQVLTNAVTEVFVAKEAHLDYYKLQNDALQASLI 236
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
T + QE S + S GG L+R+N++ G E+ L +L Q D ++ +
Sbjct: 237 DNTYISQEGQSHASVHTFSFGGTLTRNNLNFYHHGEYLESTLKGLSILEGQQHTDHYTLV 296
Query: 297 LLDHPRGYCRQLHKCIVAHSLGQA--VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNV 354
HP Q +K IV G+A VF+G + V++ AQ+T+A Q ++LL +ATV
Sbjct: 297 NHAHPNCESHQDYKSIVN---GEATNVFNGKIMVDQIAQKTNAYQQNDNILLSEKATVYT 353
Query: 355 KPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPS 414
KP L+I ADDVKCSHG + L LFY Q RGI + A L ++F V+E P+
Sbjct: 354 KPQLEIFADDVKCSHGCTVGSLSPDSLFYLQTRGIGKKEAAALLTYAFANTVLESVKIPA 413
Query: 415 IRNQV 419
+ + +
Sbjct: 414 LSDYI 418
>gi|338530235|ref|YP_004663569.1| FeS assembly protein SufD [Myxococcus fulvus HW-1]
gi|337256331|gb|AEI62491.1| FeS assembly protein SufD [Myxococcus fulvus HW-1]
Length = 446
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 179/409 (43%), Gaps = 60/409 (14%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVS 123
P L++LR + P+ +DE ++++ I P R + SS+
Sbjct: 25 PRWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAIADGTFIPAARDARDAAHLSSVVER 84
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLP--------------DGVYVGSLLG---------- 159
P LV +DG + +++ LP DG + SLLG
Sbjct: 85 LGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGELLESLLGQRALSNEHAF 144
Query: 160 -------VSDGIMKRVS-DFISEFQCGDLFWSING---MGAPDLGVI------------Y 196
+ +G + R++ +SE LF + + +P + V+ Y
Sbjct: 145 TALNAALLEEGALLRLAPGALSEVPVQLLFLTRGDGPVLASPRILVVAGESSEATLVETY 204
Query: 197 VPA--EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
A G+ + N+V EV +G + H LQ ++ A H+ RQ S +
Sbjct: 205 ASAGPAGSSATFTNAVTEVTLGDNASLHHYKLQVEADAALHLGALHARQGRDSRFASHAF 264
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCI 312
+ GG ++R+ VH G + L+ L V Q L +R LDH PR R+L+K +
Sbjct: 265 AFGGAMARNEVHAAFAGEGGDATLNG--LYVGQGAQHLDNRTALDHAVPRCTSRELYKGV 322
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ + F G ++V AQ+TD+ Q R+LLL A + +P L+I ADDVKC+HGAA
Sbjct: 323 L-DGQSRGTFHGLIRVRPDAQRTDSRQQNRNLLLSESAQADARPQLEIFADDVKCAHGAA 381
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
+ L+ LFY ++RG+ A + L ++F EV+E P +R + S
Sbjct: 382 VGRLDAQALFYLRSRGVPQAEAERLLTYAFAREVVEAVPAGPVRANIES 430
>gi|160331083|ref|XP_001712249.1| sufD [Hemiselmis andersenii]
gi|159765696|gb|ABW97924.1| sufD [Hemiselmis andersenii]
Length = 471
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 180/395 (45%), Gaps = 62/395 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD--AQF-- 128
+ +LR + L +T +PS+KDE +RFT K ++ + +S +V+ D +F
Sbjct: 66 INQLRKIGNNILKNTNFPSKKDESWRFT-----KLDRLFGMKFANSDSEVNADFVKKFFL 120
Query: 129 ----PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---DLF 181
V ++G S D ++G +++ K++ D + + G F
Sbjct: 121 ENSQARCVFLNGVFFPSLFQARENTDSYFLGRFSDLNEKERKKIRDLAGKGESGINGGFF 180
Query: 182 WSINGMGAPDLGVIYVPAEG--------------NDC-YWANSVLEVVIGKGGK---VRH 223
+N ++ V+Y+ A+ N+ N L +V K K ++H
Sbjct: 181 PILNLANLDEIAVLYIKADSKIKDPIQILFSSSTNETPICINQKLIIVCEKNSKAKIIQH 240
Query: 224 SYLQNQSL------------NAAHIKWTAVRQET---------------ASGYELVEVST 256
N+S A I + + Q T S + + S
Sbjct: 241 HVGSNESEFFDNSTTTILVDEEAQIDFFLINQVTEKASNFNSIHADLRKGSSFNFLSASF 300
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 316
GG LSR ++ + G + + ++ + Q D+HSR+ ++P QL K +++
Sbjct: 301 GGFLSRISLGIDLNGINASCNVEGVTVVKNSQISDIHSRISHNYPLCKSSQLQKNLISDK 360
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
G A+F G V+V+ A +T++ QL +SLLL + V+ P L+I +DVKC+HG+ +SDL
Sbjct: 361 -GHAIFAGKVQVHNGAYETESNQLCKSLLLSQTSKVDSMPILEINNEDVKCTHGSTVSDL 419
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
++ QLFYF++RGI +E AR L F E+IE+ P
Sbjct: 420 DQEQLFYFKSRGIPIEKARFLLTIGFIKEIIEKLP 454
>gi|86140875|ref|ZP_01059434.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
gi|85832817|gb|EAQ51266.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
Length = 437
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 191/432 (44%), Gaps = 61/432 (14%)
Query: 55 SLEDSLPSSSSSLPQPLPLQK----LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+D L SS + + ++D + + + +PS+KDE +++T + +
Sbjct: 2 SLKDKLLSSYLTFQENTSFDNSILDIKDQAIKVFETEGFPSKKDENWKYTSLNSVTKPDY 61
Query: 111 QPITRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVSD 162
++ +++ Q+ +V IDG + +S L+ DGV V L ++
Sbjct: 62 SLVSHADDAIEFKDVKQYFLNDIDTFKIVFIDG-VYSSYLS-ETTHDGVDVCLLSSALTK 119
Query: 163 GIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVP----------------------- 198
K+V D + ++ + ++N A + IYVP
Sbjct: 120 PKFKQVIDVYFNKIAKKESLTALNTAFAKEGAYIYVPKSRAVNKPIQIVHLSTGSEANLM 179
Query: 199 --------AEGN--------------DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
AE N + + NSV E+ GK +V + +QN NA+ I
Sbjct: 180 LQPRNLIVAEENAEVQVIERHQSLSSNAVFTNSVTEIYAGKHARVDYYKIQNDKENASLI 239
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
T + Q+ +S + S GGKL+R+N++ Q G + L ++ Q D ++ +
Sbjct: 240 DNTHIDQQESSEVSVHTFSFGGKLTRNNLNYYQNGEHINSILKGVTIIEDKQHVDHNTLV 299
Query: 297 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
P Q +K I VF+G V V+ AQ+ +A Q ++L+ +A++N KP
Sbjct: 300 HHRQPNCESHQDYKGIF-DDRATGVFNGKVVVDDIAQKINAYQSNNNILVSDKASINSKP 358
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
L+I ADDV+CSHG I L+E LFY + RGI + R L+++F V+E P ++
Sbjct: 359 QLEIFADDVRCSHGCTIGQLDEDALFYMRTRGIGKKEGRALLMYAFANNVLESVKIPQLK 418
Query: 417 NQVVSHVKNLMG 428
++ + + +G
Sbjct: 419 ARITNLIAEKLG 430
>gi|206579410|ref|YP_002238019.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae 342]
gi|206568468|gb|ACI10244.1| FeS assembly protein SufD [Klebsiella pneumoniae 342]
Length = 424
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH+ + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCNSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V +A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|397168399|ref|ZP_10491837.1| feS assembly protein SufD [Enterobacter radicincitans DSM 16656]
gi|396089934|gb|EJI87506.1| feS assembly protein SufD [Enterobacter radicincitans DSM 16656]
Length = 423
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T+ ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGLVLRHNTSTQLNGENTQLNINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A+K ++ +F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQAAQKMIIHAFAAELTEVIRDEALKQQVLARI 414
>gi|288935007|ref|YP_003439066.1| FeS assembly protein SufD [Klebsiella variicola At-22]
gi|288889716|gb|ADC58034.1| FeS assembly protein SufD [Klebsiella variicola At-22]
Length = 424
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH+ + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCNSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V +A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|418021122|ref|ZP_12660266.1| FeS assembly protein SufD [Candidatus Regiella insecticola R5.15]
gi|347603523|gb|EGY28344.1| FeS assembly protein SufD [Candidatus Regiella insecticola R5.15]
Length = 428
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 122/232 (52%), Gaps = 11/232 (4%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV---RQETASGYELVEVSTGG 258
+ ++ N+ L + +G ++ H L ++ + H V R A + G
Sbjct: 199 HHAHFTNARLTMAVGDNAQLTHCKLAFETAQSYHFSHNDVILGRHARAHSDSFL---LGA 255
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHS 316
L+RH+ + G + ++S L ++ + D SR L+H G+C RQLHK IV H
Sbjct: 256 GLTRHHTSSKLNGEGGDVSINSLLLPLNGEIAD--SRSYLEHHSGHCQSRQLHKTIVHHG 313
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
G AVF+G +KV +A +TD +LLL +A V KP L+I ADDVKCSHGA + +
Sbjct: 314 -GTAVFNGLLKVAPHAVKTDGQMTNNNLLLSQQAFVATKPQLEIYADDVKCSHGATVGRI 372
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
QLFY Q+RGI+ A+K ++F+F AE+ E IR QV+ + + +
Sbjct: 373 SAEQLFYLQSRGINQAEAKKMIIFAFAAELTETLENNLIRQQVIKRITDRLA 424
>gi|372273879|ref|ZP_09509915.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea sp. SL1_M5]
gi|390433784|ref|ZP_10222322.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea agglomerans
IG1]
Length = 426
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G LSRHN Q G +T ++S L V + D +R L+H +GYC RQ+HK IV
Sbjct: 252 GAGLSRHNTSTQLNGENTTLAINSLVLPVKQEVAD--TRTYLEHNKGYCVSRQMHKTIVR 309
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G++KV ++A +TD +LLL + V+ KP L+I ADDVKCSHGA I
Sbjct: 310 DK-GRAVFNGHIKVAQHALKTDGQMTNNNLLLGKLSEVDTKPQLEIYADDVKCSHGATIG 368
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A+ ++ +F AE+ E +R V+ +
Sbjct: 369 RIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTETLENEVMRQAVLQRI 417
>gi|146311419|ref|YP_001176493.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
sp. 638]
gi|145318295|gb|ABP60442.1| Iron-regulated ABC transporter permease protein SufD [Enterobacter
sp. 638]
Length = 423
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V + D +R ++H +GYC RQ+HK IV
Sbjct: 249 GGSVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD--TRTWVEHNKGYCNSRQMHKIIV- 305
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ G+AVF+G + V ++A +TD +LLL + V+ KP L+I ADDVKCSHGA +
Sbjct: 306 NDKGRAVFNGMINVAQHAIKTDGQMTNNNLLLGRLSEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIDKQAAQKMIIYAFAAELTEALGDEELKQQVLARI 414
>gi|374849932|dbj|BAL52934.1| Fe-S cluster assembly protein SufD [uncultured beta
proteobacterium]
Length = 441
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 1/228 (0%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
++ N+V E+++ + ++ H +Q I AV E + Y + GG+L+RH+
Sbjct: 210 HFVNAVAEIIVARDAQLTHYVVQELPAAVQQIATHAVAVEANACYRSFNIQLGGRLARHD 269
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
++V P EL +L+ Q D H+RL + R+ ++ ++ G+ VF G
Sbjct: 270 INVHLHAPGAVAELEGLYLVGMRQHIDTHTRLFHEAAATTSRERYR-LIGLERGRGVFKG 328
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
V+V A ++DA Q +SLLL P A ++ KP L+I DDV CSHGA + L+ FY
Sbjct: 329 KVRVAPGAAKSDAQQSVKSLLLHPGAEIDAKPELEIYTDDVTCSHGATVGQLDRDARFYL 388
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
+RG+ + A L+F+F V+E P+++ + + + D+
Sbjct: 389 LSRGLSPQEADALLIFAFAEAVVEAVTLPALKTYLTERLIGRLPDRDI 436
>gi|290509068|ref|ZP_06548439.1| FeS assembly protein SufD [Klebsiella sp. 1_1_55]
gi|289778462|gb|EFD86459.1| FeS assembly protein SufD [Klebsiella sp. 1_1_55]
Length = 424
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH+ + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCNSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V +A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|426402180|ref|YP_007021151.1| [Fe-S] cluster assembly transport protein [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425858848|gb|AFX99883.1| transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus str. Tiberius]
Length = 419
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 186/417 (44%), Gaps = 76/417 (18%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSS 118
S S P L R + L+ P+RKDE + +T + S + P+ PS
Sbjct: 11 SQSNPAEGALSAFRKAGYDYALNKGLPTRKDEDWHYTSVKTLNEGTFLPSAVNPL-EPSH 69
Query: 119 SLDVST----DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
V + +F ++V +G + N L+ + LP GV +K VS + +
Sbjct: 70 DTLVEIKKYLNPEFANIVFFNGVL-NKTLS-AELPAGV-----------TLKDVSQYPVQ 116
Query: 175 FQCGDLFWSINGM-----------------------------GAPDLGV----------- 194
F D F ++NG G P L V
Sbjct: 117 FD--DTFDALNGAYMAKPFVVTVAKETSVEKPVNFVFFTSVEGGPSLMVHPRLSFEIGAR 174
Query: 195 IYVP------AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 248
YV + Y+ANSV +V +G+ K + +Q +S +A +I T + E +
Sbjct: 175 SYVRVLESHYGKAGTTYFANSVSDVHVGESAKFVYVRVQAESESAVNIGRTRMVIEKDAN 234
Query: 249 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR-- 306
E + +TG LSRH++ V GP + TE+ + + +Q D S L++H G C
Sbjct: 235 VESLAFATGASLSRHSLDVILNGPGSNTEILGVYAVRGNQHLDNTS--LINHKVGECNTN 292
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
QL+K I+ +AVF G V++ + AQ+ ++ QL +LLL +A + KP LQI ADDVK
Sbjct: 293 QLYKGILDGE-SRAVFCGTVRIEKGAQKANSAQLNNNLLLSGKAEADSKPCLQIYADDVK 351
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+HG+ + L +LFY Q+R I E A L + + +EVI + +I+ + H+
Sbjct: 352 AAHGSTVGQLNREELFYLQSRAIPKEKAIPMLSYGYLSEVIYKISDENIQKWLSRHL 408
>gi|317047893|ref|YP_004115541.1| FeS assembly protein SufD [Pantoea sp. At-9b]
gi|316949510|gb|ADU68985.1| FeS assembly protein SufD [Pantoea sp. At-9b]
Length = 425
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G LSRHN Q G +T ++S L ++ + D +R L+H +G+C RQ+HK IV
Sbjct: 251 GAGLSRHNTSAQLNGENTNLAMNSLALPINQEVCD--TRSYLEHNKGHCMSRQMHKTIVR 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPR-ATVNVKPNLQIIADDVKCSHGAAI 373
G+AVF+G +KV ++A +TD GQ+T + LL R A V+ KP L+I ADDVKCSHGA +
Sbjct: 309 DK-GRAVFNGMIKVAQHALKTD-GQMTNNNLLMGRLAEVDTKPQLEIYADDVKCSHGATV 366
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ A++ ++ +F AE+ E P +R V+ +
Sbjct: 367 GRIDDEQMFYLRSRGIEESAAQRMIIHAFAAELTETLENPVLRQAVLQRI 416
>gi|374374430|ref|ZP_09632089.1| Iron-regulated ABC transporter permease protein SufD [Niabella soli
DSM 19437]
gi|373233872|gb|EHP53666.1| Iron-regulated ABC transporter permease protein SufD [Niabella soli
DSM 19437]
Length = 434
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G D + N V E+V+ +G + +QN + N+ + T V Q S +V +S G L
Sbjct: 206 GADESFTNQVFEIVVEEGAVLNLCKIQNDAPNSTIVSTTHVHQVGKSVANVVTISLSGGL 265
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV-AHSLGQ 319
R+N+++ P E L+ +L D H+ + P +L+K I+ HS G
Sbjct: 266 VRNNLNMVMSAPRCEANLTGLYLQNGHTHVDNHTVVDNRQPNCLSNELYKGIMDGHSTG- 324
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
VF+G + V + AQ+T+A Q +++LL A+VN KP L+I ADDVKCSHG + L++
Sbjct: 325 -VFNGKIFVRQIAQKTNAYQTNKNILLSENASVNTKPQLEIFADDVKCSHGCTVGQLDDE 383
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY ++RGI TAR L+ F +V+E+ +R V
Sbjct: 384 ALFYLKSRGISEATARALLLRGFALDVLEKIQSDDVRAYV 423
>gi|441500737|ref|ZP_20982891.1| Iron-sulfur cluster assembly protein SufD [Fulvivirga imtechensis
AK7]
gi|441435578|gb|ELR68968.1| Iron-sulfur cluster assembly protein SufD [Fulvivirga imtechensis
AK7]
Length = 444
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 109/203 (53%), Gaps = 1/203 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N V E+V+ + + +QN A H+ T V Q S + + G + R+N+
Sbjct: 220 FTNIVSEIVVNENANAEYYKIQNNRDTAFHVGTTQVWQARNSQFSAYTFTLNGAMIRNNL 279
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
++ G E+ + +LL D H+ + P + +L+K I+ VF+G
Sbjct: 280 NIASDGEGCESHMYGLYLLHGKTHVDNHTEIDHIKPNSFSNELYKGIMEDQ-SHGVFNGK 338
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V + AQ+T+A Q +++LL +AT+N KP L+I ADDVKCSHG L+E LFY Q
Sbjct: 339 VYVRQAAQKTNAFQSNKNILLSDQATINSKPQLEIWADDVKCSHGCTTGQLDEEALFYLQ 398
Query: 386 ARGIDLETARKALVFSFGAEVIE 408
+RG+ E AR L+++F EV+E
Sbjct: 399 SRGVSKERARVLLLYAFAVEVLE 421
>gi|261339559|ref|ZP_05967417.1| FeS assembly protein SufD [Enterobacter cancerogenus ATCC 35316]
gi|288318376|gb|EFC57314.1| FeS assembly protein SufD [Enterobacter cancerogenus ATCC 35316]
Length = 423
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENTTLCINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGLLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGID + A+K ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALRDGILKQQVLTRI 414
>gi|86134637|ref|ZP_01053219.1| FeS assembly protein SufD [Polaribacter sp. MED152]
gi|85821500|gb|EAQ42647.1| FeS assembly protein SufD [Polaribacter sp. MED152]
Length = 437
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 117/222 (52%), Gaps = 1/222 (0%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
+N V EV K V + +QN + NA+ + T V Q++ S + S GG ++R+N++
Sbjct: 210 SNVVTEVFAAKSATVDYYKIQNDNTNASLVDNTYVNQKSNSVVSVHTFSFGGNITRNNLN 269
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 326
Q G ++ L ++ Q D H+ + P Q +K I VF+G V
Sbjct: 270 FYQNGEHIDSILKGITIIEGKQHVDHHTLVHHIEPNCESHQDYKGIFDER-STGVFNGKV 328
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
V + AQ+T+A Q ++L+ +AT+N KP L+I ADDVKCSHG I L++ LFY Q
Sbjct: 329 IVEKEAQKTNAYQQNNNVLVSDKATINAKPQLEIFADDVKCSHGCTIGQLDDDALFYMQQ 388
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
RGI + R L+F+F V+E P +++++ + N +
Sbjct: 389 RGIPKKEGRGLLMFAFANTVLESVKIPEVKSRITKLIANKLN 430
>gi|255039511|ref|YP_003090132.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
gi|254952267|gb|ACT96967.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
Length = 439
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 121/218 (55%), Gaps = 5/218 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ + N+V E+ + + V++ +QN+S NA HI T VR S + V+ GK
Sbjct: 211 GDQRSFTNAVTEIHVAEEANVQYYKVQNESENAYHIGTTQVRMLDRSHFYAGTVTLNGKF 270
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
+R+N+++ G + + + L D +Q + + + DH P +L+K I+
Sbjct: 271 TRNNLNIVLDGEHCDAHM--YGLYFPDGSQHVDNHTVADHQKPNSESNELYKGIL-RDKS 327
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ VF+G + V AQ+T+A Q ++++L P AT+N KP L+I ADDVKCSHG ++E
Sbjct: 328 KGVFNGKIFVRPDAQKTNAFQSCKNIVLSPDATMNTKPQLEIFADDVKCSHGTTTGQIDE 387
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
LFY ++RGI A L+F+F A+V+ + SIR
Sbjct: 388 EALFYMRSRGISQPEAMSLLMFAFCADVVSQIKIDSIR 425
>gi|384440330|ref|YP_005655054.1| SufD protein (Membrane protein) [Thermus sp. CCB_US3_UF1]
gi|359291463|gb|AEV16980.1| SufD protein (Membrane protein) [Thermus sp. CCB_US3_UF1]
Length = 431
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 188/420 (44%), Gaps = 67/420 (15%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------M 104
L + S +L +PL L + R + + L P+PS+K+E +R+TD S +
Sbjct: 9 LEAISQALSEPLWLLEKRLKALEAFLRLPYPSKKEENWRYTDLSEAPLEQEVEAPRGLKL 68
Query: 105 IKSSQIQPITRPSSSLDVS----------TDAQFPSLVLIDGFIQNS-ALNLSNLPDGVY 153
+ + + + R DVS A+ P +L G + S A L P V
Sbjct: 69 SRDALPEAVRRRLEKTDVSGFLVFVGPDLVYAEVPEELLAKGLVFTSLAEALKTHPHKVE 128
Query: 154 VGSLLGV--SDGIMKRVSDFISEFQCGDLFWSINGMGAPD-LGVIYVPAEGNDCYWANSV 210
GV D + F F G + G+ LGV V EG S+
Sbjct: 129 SALFQGVYTEDKFAALNAAF---FTHGAFLYVPAGLEVEKPLGVFKVLLEGGKASAGRSL 185
Query: 211 L----------------------------EVVIGKGGKVRHSYLQNQSLNAAHI-KWTAV 241
L E+++ G ++RH+++Q H + A+
Sbjct: 186 LFLEDNAKAAYIEEYLSPDLSPTLHLSATEMLLRPGARLRHAHVQTFGEGVWHFHRQRAL 245
Query: 242 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 301
+ A+ +LV V+ GG+ +R V + LGP E+E+ + Q D ++ L H
Sbjct: 246 LERDAALNDLV-VNLGGRYARSEVASELLGPGGESEMLGLYFGHGRQQFDHYT--LQHHV 302
Query: 302 RGYCRQ--LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQ 359
+ R L+K V +AVF G +K+ R AQ+TDA Q R+LLL P A V+ P L+
Sbjct: 303 EHHTRSDLLYKGAVKDE-ARAVFSGLIKLERGAQKTDAYQANRNLLLSPTARVDSIPQLE 361
Query: 360 IIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
I A+DV+C+HG+ + ++E QLFY Q+RG+ A++ LV + A+V+ R P ++R +
Sbjct: 362 IGANDVRCTHGSTTAPVDEMQLFYLQSRGLPRTLAQELLVKAHLADVLTRIPLKALRGHI 421
>gi|188533953|ref|YP_001907750.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
tasmaniensis Et1/99]
gi|188028995|emb|CAO96863.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
tasmaniensis Et1/99]
Length = 398
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RH+ Q G ++ ++S L + + D SR L+H +GYC RQLHK IV
Sbjct: 224 GAGLTRHHTSTQLNGEGSDLAINSLMLPIDKEVCD--SRTWLEHNKGYCQSRQLHKTIV- 280
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKC HGA I
Sbjct: 281 RDRGRAVFNGIIKVAKHALKTDGQMSNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIG 340
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E Q+FY ++RGID A++ ++++F AE+ E +++ V+ +
Sbjct: 341 RIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAIANETLKEAVMQRI 389
>gi|88799896|ref|ZP_01115468.1| Cysteine desulfurase activator SufB [Reinekea blandensis MED297]
gi|88777327|gb|EAR08530.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
Length = 429
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 182/406 (44%), Gaps = 60/406 (14%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT---DTSMIKSSQIQPITRPSS 118
S + +P LQ+ + + TPWP+RK E +++T + I S +P T +
Sbjct: 12 SKQEAWSRPQWLQQWQQAGLDRFRETPWPTRKTEHWKYTPLKSLTGIDWSLPEPKTSVAD 71
Query: 119 SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
+ D L +++G +QN +LP GV SL+ +S+ ++ F++ +
Sbjct: 72 GIRFD-DWNAIRLNIVNGELQNPG----DLPTGV---SLVRLSECNQEQAERFLAALEAS 123
Query: 179 ---------------DLFW------------------------------SIN-GMGAPDL 192
D +W IN G+GA
Sbjct: 124 RNDFLFDTANQAFIQDAYWLNVDPNTQVQQALHLNYVTDGDDVLSSSQIWINLGVGAQVT 183
Query: 193 GV-IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
V + E C N+ + + ++ H +L + +A HI + ++ +
Sbjct: 184 VVETFSAGEQGRCL-VNANTAITLADNARMTHYHLMLEEGDAHHIGRVTAELQRSAYLDS 242
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 311
V GG L R ++ V+ G E L+ +L + D H+ + + P ++ +
Sbjct: 243 FHVGIGGVLKRKDIRVRHCGEGAELRLNGVYLPKGAEIIDYHTCIEHEVPHCTSEEIFRG 302
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
I++ S +AVF+G + +++ AQ++ A R+LLL +A ++ KP L+I ADDVKC+HGA
Sbjct: 303 IISDS-AKAVFNGRIHIHKDAQKSLAEMNNRNLLLSDQAEIDTKPELEIYADDVKCAHGA 361
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
I+ L+++QLFYFQARGI A L F F E+++ +++N
Sbjct: 362 TIARLDDTQLFYFQARGISRAEAEVMLSFGFINELLDSLQDEAVQN 407
>gi|410028958|ref|ZP_11278794.1| Iron-regulated ABC transporter permease protein SufD [Marinilabilia
sp. AK2]
Length = 425
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 118/227 (51%), Gaps = 1/227 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
+D Y++N V E+ + + V +S LQ +S A + + + +S G +
Sbjct: 197 DDPYFSNMVTEIKVAQNAHVHYSRLQAESRKAIVVNNFETDIHRDATFTSSVISLSGDMV 256
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R+N+ + L E + +LL D H+ + P +L+K I+A + V
Sbjct: 257 RNNLTLNLLDSGCEGNMYGLYLLNGKTHVDNHTNVDHTKPHAESNELYKGILADQ-SRGV 315
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G + V + AQ+T+A Q ++LL ATVN KP L+I ADDVKCSHG L+E L
Sbjct: 316 FNGKIFVRQDAQKTNAFQQNNNILLSEDATVNTKPQLEIWADDVKCSHGCTTGQLDEEAL 375
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
FY QARG+ + A+ L+++F EV+E+ S R V S V+ +G
Sbjct: 376 FYLQARGLAKDQAKGLLLYAFAGEVLEKISNDSFREFVTSKVQERLG 422
>gi|386819500|ref|ZP_10106716.1| FeS assembly protein SufD [Joostella marina DSM 19592]
gi|386424606|gb|EIJ38436.1| FeS assembly protein SufD [Joostella marina DSM 19592]
Length = 438
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 5/215 (2%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
N+V E+ K G V + +QN + NA+ I T + Q+ S + S GGK++R+N+
Sbjct: 211 TNAVTEIFTHKRGIVDYYKIQNDNPNASLIDNTYISQQQNSHASVHTFSFGGKITRNNLQ 270
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDG 324
G + L + +++ Q + L+ H C Q +K I + S VF+G
Sbjct: 271 FVHKGEHINSTLKG--ITITEDKQHVDHSTLVHHATPNCESHQDYKGIYSDS-STGVFNG 327
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V + AQ+T+ Q + ++L++ +AT+N KP L+I ADDVKCSHG I L+E LFY
Sbjct: 328 RIIVEKEAQKTNGFQQSNNILIDDKATINAKPQLEIFADDVKCSHGCTIGQLDEEALFYL 387
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Q+RGI + AR L+++F V+E P ++ ++
Sbjct: 388 QSRGIPKKEARALLMYAFANNVLESVKIPEVKTRI 422
>gi|429756138|ref|ZP_19288749.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|429171988|gb|EKY13573.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 433
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 114/223 (51%), Gaps = 1/223 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V EV + K + + LQN SL A+ I T + QE S + S GG L+R+N++
Sbjct: 209 NAVTEVFVAKDAFLDYYKLQNDSLTASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G E+ L +L Q D ++ + +P Q +K IV+ VF+G +
Sbjct: 269 YHQGEHLESTLKGLSILQGTQHTDHYTLVNHAYPNCESHQDYKSIVSDE-ATNVFNGKIM 327
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L LFY Q R
Sbjct: 328 VEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTR 387
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GI + A L ++F V+E P++ + + +G T
Sbjct: 388 GIGKKEAAALLTYAFANTVLESVSIPALSEYINRIIAEKLGVT 430
>gi|308186668|ref|YP_003930799.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea vagans C9-1]
gi|308057178|gb|ADO09350.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea vagans C9-1]
Length = 426
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 119/231 (51%), Gaps = 5/231 (2%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
++ + IG K+ H+ L +S + H + G LSRH
Sbjct: 199 AHFTGTRFTFAIGDNAKLTHTKLAFESSASYHFAHNDLVIGNDGQVSSTSFLLGAGLSRH 258
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 321
N Q G +T ++S L V + D +R L+H +G+C RQ+HK IV G+AV
Sbjct: 259 NTSTQLNGENTTLAINSLVLPVKQEVAD--TRTYLEHNKGHCVSRQMHKTIVRDK-GRAV 315
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G++KV ++A +TD +LLL + V+ KP L+I ADDVKCSHGA I +++ Q+
Sbjct: 316 FNGHIKVAQHALKTDGQMTNNNLLLGKLSEVDTKPQLEIYADDVKCSHGATIGRIDDEQM 375
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
FY ++RGI+ + A+ ++ +F AE+ E +R V+ + DV
Sbjct: 376 FYLRSRGIEQDAAQTMIIHAFAAELTETLENEVMRQAVLQRIAQRFPGGDV 426
>gi|323495958|ref|ZP_08101024.1| dufD protein [Vibrio sinaloensis DSM 21326]
gi|323318993|gb|EGA71938.1| dufD protein [Vibrio sinaloensis DSM 21326]
Length = 423
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
S L IG+G +H+ L +S H +R + + + V G L RH +
Sbjct: 199 SRLTSYIGEGANYQHTKLIEESKQQHHFGHNDIRLQRDAKAKSTAVLLSGLLVRHQTSSE 258
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNV 326
G + E ++S + +QT D SR L H +CR Q+HK I+ G AVFDG +
Sbjct: 259 LSGDNGELAMNSVAMPKDEQTFD--SRTYLKHNAPHCRSEQMHK-IIGRDKGNAVFDGMI 315
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
V+ A +TD T SLLL A VN KP L+I ADDVKCSHGA ++++Q+ Y +A
Sbjct: 316 YVDPVALKTDGQMDTHSLLLSDHAQVNCKPQLEIYADDVKCSHGATTGQMDKNQIDYMRA 375
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
RGI+ E A + L+ +F EV ++ +PS+R+ V
Sbjct: 376 RGINQEQAEQMLMSAFVCEVADKIRHPSLRSYV 408
>gi|332284498|ref|YP_004416409.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
gi|330428451|gb|AEC19785.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
Length = 435
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 165/400 (41%), Gaps = 47/400 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS---LDVSTDAQFP 129
L +R + + S WP+ K E +R T + ++ P + S + V +
Sbjct: 26 LAAMRKRAIERFASEGWPTTKQENWRHTSLATLEQQSFLPAGQASVADLVNQVRANESGH 85
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV DG + ++ +LP G + +L V D + G ++N A
Sbjct: 86 WLVFTDGRFDPALSDIGDLPGGAQILALSAALADSPDTVQDLFGDETQGASTAALNLALA 145
Query: 190 PDLGVIYVP-------------------------------------------AEGNDCYW 206
D VI + + +
Sbjct: 146 SDGAVIRLARGVELEKPVHLIFIAASQQAASFPRNLIQAEAGSRAVIVEHYLGQNSGASL 205
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
N+V + V H LQ++ A H+ V Q T S Y +S G +L+RH++
Sbjct: 206 TNTVTRAQLAADAHVTHLKLQHEDEQAVHLGAIDVVQATGSVYNSHSMSFGARLARHDIA 265
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 326
G E L+ + + + D H+ + P G + ++ ++A + + VF G +
Sbjct: 266 TDFSGDHCEALLNGLYYVNGRRHVDHHTLIGHSKPHGVSHEYYRGVLADT-ARGVFSGRI 324
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
V A +TDA Q + SLLL A + +P L+I ADDVKC+HGA + ++E LFY +
Sbjct: 325 LVAPGADKTDAVQRSDSLLLSRMAKADARPELEIYADDVKCAHGATVGQIDEDSLFYLRT 384
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNL 426
RG+D +AR L ++F AE + R +R ++V +++L
Sbjct: 385 RGLDESSARSVLTYAFAAEAVARIEPEILRRRIVGAIRSL 424
>gi|161503531|ref|YP_001570643.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:- str.
RSK2980]
gi|160864878|gb|ABX21501.1| hypothetical protein SARI_01607 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 421
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 132/239 (55%), Gaps = 7/239 (2%)
Query: 188 GAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET-A 246
GA + + + G ++ + L + + + ++RH L ++ ++ H + T A
Sbjct: 180 GAEATVIEHYVSHGEAKHFTGARLTMKVAENARLRHIKLTFENASSYHFAHNDLLLATDA 239
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC- 305
S + + G + RH+ Q G + L+S + V ++ D +R L+H +GYC
Sbjct: 240 SAFSHCFL-LGAAVLRHHTSTQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCN 296
Query: 306 -RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
RQLHK IV+ G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADD
Sbjct: 297 SRQLHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
VKCSHGA + +++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 356 VKCSHGATVGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSTLKQQVLARI 414
>gi|152970687|ref|YP_001335796.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|262044176|ref|ZP_06017248.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012604|ref|ZP_08307439.1| FeS assembly protein SufD [Klebsiella sp. MS 92-3]
gi|365137840|ref|ZP_09344550.1| FeS cluster assembly protein sufD [Klebsiella sp. 4_1_44FAA]
gi|378979282|ref|YP_005227423.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|386035272|ref|YP_005955185.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae KCTC 2242]
gi|419975142|ref|ZP_14490555.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419979595|ref|ZP_14494885.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419984168|ref|ZP_14499316.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419991852|ref|ZP_14506814.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419998271|ref|ZP_14513060.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420003263|ref|ZP_14517910.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420008760|ref|ZP_14523248.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420015157|ref|ZP_14529459.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420020458|ref|ZP_14534645.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420026148|ref|ZP_14540152.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420031994|ref|ZP_14545812.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420037828|ref|ZP_14551480.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420043416|ref|ZP_14556904.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420049363|ref|ZP_14562671.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420055031|ref|ZP_14568201.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420060501|ref|ZP_14573500.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420066575|ref|ZP_14579374.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420071975|ref|ZP_14584617.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420078299|ref|ZP_14590758.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420081664|ref|ZP_14593970.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|421908271|ref|ZP_16338119.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421919150|ref|ZP_16348658.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424831069|ref|ZP_18255797.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|428148059|ref|ZP_18995954.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428941712|ref|ZP_19014746.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae VA360]
gi|150955536|gb|ABR77566.1| required for stability of iron-sulfur component of FhuF [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259038473|gb|EEW39672.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328533763|gb|EGF60452.1| FeS assembly protein SufD [Klebsiella sp. MS 92-3]
gi|339762400|gb|AEJ98620.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae KCTC 2242]
gi|363655732|gb|EHL94539.1| FeS cluster assembly protein sufD [Klebsiella sp. 4_1_44FAA]
gi|364518693|gb|AEW61821.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|397343727|gb|EJJ36869.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397348416|gb|EJJ41516.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354685|gb|EJJ47724.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397360867|gb|EJJ53538.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397362627|gb|EJJ55275.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397370247|gb|EJJ62838.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397376800|gb|EJJ69047.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397382951|gb|EJJ75105.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397387789|gb|EJJ79796.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397395774|gb|EJJ87474.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397398897|gb|EJJ90555.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397405067|gb|EJJ96546.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397413296|gb|EJK04513.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397414190|gb|EJK05392.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397422296|gb|EJK13273.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397429463|gb|EJK20177.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397433550|gb|EJK24197.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397439737|gb|EJK30170.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397445064|gb|EJK35319.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397453009|gb|EJK43073.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|410117835|emb|CCM80744.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410118547|emb|CCM91283.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|414708502|emb|CCN30206.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|426299976|gb|EKV62283.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae VA360]
gi|427541993|emb|CCM92092.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 424
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHQTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|376317242|emb|CCG00611.1| FeS assembly protein SufD [uncultured Flavobacteriia bacterium]
Length = 437
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 122/225 (54%), Gaps = 5/225 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NSV E+ K + +QN NA+ I T + QE + + S GGK++R+N+
Sbjct: 209 FTNSVTEIFAEKRAYLDFYKIQNDKENASLIDNTFIHQEQDTNCNVHTFSLGGKITRNNL 268
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFD 323
+ Q G ++ L +L Q D ++ L++H P Q +K + A S VF+
Sbjct: 269 NFSQNGEHCDSTLKGVTILKDKQHVDHNT--LVNHISPNCESHQDYKGLYADS-STGVFN 325
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G V V + AQ+ +A Q ++L++ ATVN KP L+I ADDVKCSHG I +E LFY
Sbjct: 326 GRVIVEKEAQKINAFQQNNNILIDDNATVNAKPQLEIFADDVKCSHGCTIGQFDEDALFY 385
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
++RGI L+ A+ L+++F V+E P ++ ++ + + +G
Sbjct: 386 LRSRGIGLKEAQALLMYAFANTVLETVKIPELKRRINNLIAEKIG 430
>gi|238897308|ref|YP_002922985.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465063|gb|ACQ66837.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 432
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 123/223 (55%), Gaps = 13/223 (5%)
Query: 205 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWT-AVRQETASGYELVEVSTGGKL 260
++ + L IG+ ++ H ++ NQS + AH + A R S + L+ G L
Sbjct: 206 HFTGARLTASIGEEARLHHYKLAFENNQSDHFAHNDFVLASRASVHSAHFLL----GAAL 261
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 318
+RH+ VQ G ++S LL+ + + SR ++H + C RQLHK +V+ G
Sbjct: 262 TRHHTSVQLNGEGASASINS--LLLPKEMELFDSRTHVEHNQIGCQSRQLHKTMVSKQ-G 318
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
AVF+G +KV A QTDA + +LLL A VN KP L+I ADDVKCSHGA + ++
Sbjct: 319 TAVFNGMIKVAPKAIQTDAHMINNNLLLNASAQVNTKPQLEIDADDVKCSHGATVGCIDN 378
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
Q+FY Q+RGI ARK ++F+F +E+ E +R V+S
Sbjct: 379 QQMFYLQSRGITHSQARKMILFAFASELTEGIKLDLVRESVLS 421
>gi|424932994|ref|ZP_18351366.1| Cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|407807181|gb|EKF78432.1| Cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
Length = 424
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHQTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|444351859|ref|YP_007388003.1| Iron-sulfur cluster assembly protein SufD [Enterobacter aerogenes
EA1509E]
gi|443902689|emb|CCG30463.1| Iron-sulfur cluster assembly protein SufD [Enterobacter aerogenes
EA1509E]
Length = 423
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RH+ + G ++ ++S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 249 GGAVLRHHTSTRLAGENSNLRINSLAMPVKNEVCD--SRTWLDHRVGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAKHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ QLFY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQLFYLRSRGIEQQAAQQMILYAFAAELTEAISDDALKQQVLARI 414
>gi|332878306|ref|ZP_08446032.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332683757|gb|EGJ56628.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 433
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 180/416 (43%), Gaps = 64/416 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS-SLDVSTDAQF 128
L+ +R + +P +K E +++T S ++++ QP+ ++ S +V +
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKIEAWKYTSLSKLQATDYSLWQPVNEKATLSAEVLHEYSI 80
Query: 129 P---SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCGDL 180
SLV ++GF A S GV + LL + + K FIS++ + GD+
Sbjct: 81 KDCYSLVFVNGFY--CAEMSSKEIAGVTITPLL---EALHKGGEAFISKYFNTTTEKGDV 135
Query: 181 FWSINGMGAPDLGVIYVPAEG-----------ND-----CY------------------- 205
F ++N A + I VP ND CY
Sbjct: 136 FTALNTAFASEGIYIEVPKGKVVDKPIQLLYFNDRGETTCYQPRNIIAVGENAQLKVIEV 195
Query: 206 -----------WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
N+V E+ + K + + LQN L A+ I T + QE S +
Sbjct: 196 HQNVSNTATAILTNAVTEIFVAKEAFLDYYKLQNDRLTASLIDNTYISQEANSHASVHTF 255
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
S GG+L+R+N++ G E+ L +L Q D ++ + +P Q +K IV+
Sbjct: 256 SFGGELTRNNLNFYHQGEHLESTLKGLSILQGSQHTDHYTLVNHAYPNCESHQDYKSIVS 315
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
VF+G + V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG +
Sbjct: 316 DE-ATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVG 374
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
L LFY Q RGI + A L ++F V+E P + + + +G T
Sbjct: 375 SLSADSLFYLQTRGIGKKEASALLTYAFANTVLESVKIPVLSAYINRIIAEKLGVT 430
>gi|449053644|ref|ZP_21732558.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae hvKP1]
gi|448875613|gb|EMB10625.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae hvKP1]
Length = 424
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHQTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|425081976|ref|ZP_18485073.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428933169|ref|ZP_19006729.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae JHCK1]
gi|405601202|gb|EKB74356.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|426305871|gb|EKV67984.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae JHCK1]
Length = 424
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHQTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|425091950|ref|ZP_18495035.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|405613009|gb|EKB85760.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 424
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH+ + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|293396325|ref|ZP_06640603.1| FeS assembly protein SufD [Serratia odorifera DSM 4582]
gi|291421114|gb|EFE94365.1| FeS assembly protein SufD [Serratia odorifera DSM 4582]
Length = 428
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RHN Q G + ++S L + + D +R L+H +G+C RQLHK +V+
Sbjct: 254 GAGLTRHNTSAQLNGEGSNLAINSLILPIGKEVCD--TRTYLEHNKGFCESRQLHKTVVS 311
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 312 -DRAKAVFNGMIKVAKHAIKTDGQMTNHNLLLGNVAEVDTKPQLEIYADDVKCSHGATVG 370
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI A++ ++F+F AE+ E +IR QV+ +
Sbjct: 371 RIDQEQIFYLQSRGISRHDAQQMIIFAFAAELTEGIKDDAIREQVLVQI 419
>gi|85059412|ref|YP_455114.1| cysteine desulfurase activator complex subunit SufD [Sodalis
glossinidius str. 'morsitans']
gi|84779932|dbj|BAE74709.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 428
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 105/173 (60%), Gaps = 5/173 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RH Q G ++ ++S L D +R L+H +G+C RQLHK ++A
Sbjct: 254 GAGLTRHQTSAQLNGEGSDLAINSLLLPSGQDISD--TRTYLEHNKGHCLSRQLHK-VIA 310
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+ VF+G +KV ++A +TD +LLL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 311 RDRGKGVFNGLIKVAKHALKTDGQMTNNNLLLDRLAEVDTKPQLEIYADDVKCSHGATVG 370
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
++E Q+FY ++R I E A++ ++++F AEV+E + +R+ V++ + + +
Sbjct: 371 RIDEEQMFYLRSRAITRENAQQMIIYAFAAEVMEAIGHEGVRDTVLARIADAL 423
>gi|392398274|ref|YP_006434875.1| Iron-regulated ABC transporter permease protein SufD [Flexibacter
litoralis DSM 6794]
gi|390529352|gb|AFM05082.1| Iron-regulated ABC transporter permease protein SufD [Flexibacter
litoralis DSM 6794]
Length = 441
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 208/450 (46%), Gaps = 83/450 (18%)
Query: 41 QATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT 100
++TF PF +LAE + +++ + +L + L+ + + +P+ ++E ++FT
Sbjct: 9 KSTFLAPFE-ELAEQVSENINTDKLTLAKKTALEAIEEK--------EFPTTRNEEWKFT 59
Query: 101 DTSMIKSSQIQPITRP---SSSLDVS-------TDAQFPS--LVLIDGFIQNSALNLSNL 148
D + S+ + ++ +S+LD++ ++ + S LV I+G+ ++ L
Sbjct: 60 DIKSVISNNFELQSKEGSENSTLDLNELDYYLNSNKELDSHILVFINGYFSEKHSSIKAL 119
Query: 149 PDGVYVGSLLGV---SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAEGND-- 203
D + + +L + S K SD +S +F IN APD G + A+ +
Sbjct: 120 NDKISIKTLSNIEANSSIFDKFESDSVS------IFSDINTAFAPD-GYVIELADNQELE 172
Query: 204 ----CYWAN-----------------------SVLEVVIGKG-----------------G 219
Y+ N +V+E I KG
Sbjct: 173 LPVFVYFVNDASQKNTLSQVRNYISVGENSRCTVVENYITKGENPNLVNIVTSINVEKYA 232
Query: 220 KVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELS 279
V+H +Q + + + T +Q S + +S GKL R+++ + G E+ ++
Sbjct: 233 NVKHLKIQADAKSQFQVGSTHAKQADNSSFTNTTISLAGKLIRNDLRIIS-GEHCESYMN 291
Query: 280 SFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDA 337
+LL D H+ ++DH P Y +++K ++ +AVF+G + V + AQ+T+A
Sbjct: 292 GLYLLNEKTHVDNHT--VIDHQRPNSYSNEMYKGVL-DGKSRAVFNGKIFVRQAAQKTNA 348
Query: 338 GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKA 397
Q +++LL + +N KP L+I ADDVKCSHGA L+E LFY QARGI + A+
Sbjct: 349 FQSNKNVLLSDDSILNTKPQLEIWADDVKCSHGATTGKLDEEALFYLQARGIPKQKAKSL 408
Query: 398 LVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
L+ +F EV++ +R + + ++N +
Sbjct: 409 LLQAFAEEVLDSIEIDVLREFLTNEIENRL 438
>gi|419763520|ref|ZP_14289763.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397743449|gb|EJK90664.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 424
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHQTSTRLDGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|440287373|ref|YP_007340138.1| FeS assembly protein SufD [Enterobacteriaceae bacterium strain FGI
57]
gi|440046895|gb|AGB77953.1| FeS assembly protein SufD [Enterobacteriaceae bacterium strain FGI
57]
Length = 424
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G ++RH+ Q G +T ++S + V+ + D +R L+H +GYC RQLHK IV+
Sbjct: 250 GAAITRHHTSSQLNGENTTLRMNSLAMPVNTEVCD--TRTWLEHNKGYCNSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A + KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAKHAIKTDGQMTNNNLLLGRLAEADTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ QLFY ++RGI ARK ++++F AE+ E +++ QV++ +
Sbjct: 367 RIDDEQLFYLRSRGISDRDARKIIIYAFAAELTEAIANDALKQQVLTRI 415
>gi|389841247|ref|YP_006343331.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
sakazakii ES15]
gi|387851723|gb|AFJ99820.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
sakazakii ES15]
Length = 424
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 196/421 (46%), Gaps = 66/421 (15%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTD-TSMIKSSQI 110
LP+SS++L Q L + + Q LL P+RK E +++T ++K +
Sbjct: 4 LPNSSNALQQWHRLFEAQGGERSEEAREHLQQLLRLGLPTRKHEDWKYTPLDGLLKHDFV 63
Query: 111 QPITRPSSSLDVSTDAQFP----SLVLIDGFI--------QNSALNLS------NLPDGV 152
P+ S +ST A P LV IDG NS +S L V
Sbjct: 64 VPVAEALSREALSTLA-LPVDALRLVFIDGHFVPELSDATDNSGFEISVNDSRRGLTTPV 122
Query: 153 YVGSLLGVSDGIMKRVSDF----------------ISEFQCGDLFWSIN-------GMGA 189
+ L +++ + + V+ IS + GD +++ GA
Sbjct: 123 QPEAFLHLTESLAQSVTHIHVARNQKPSKALLLMHISAGRAGDEINTVHYRHHLELAEGA 182
Query: 190 PDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETA 246
+ + + ++ + L + +G ++ H L + S + AH + A
Sbjct: 183 QATVIEHYVSRDEKPHFTGARLTMQVGANAQLNHYKLAFENPVSWHFAHNDLIVSQDAHA 242
Query: 247 --SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 304
S Y L G + RHN Q G + ++S L V+++ D +R L+H +GY
Sbjct: 243 ASSSYLL-----GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGY 295
Query: 305 C--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA 362
C RQLHK IV G+AVF+G +KV ++A +TD +LLL A V+ KP L+I A
Sbjct: 296 CNSRQLHKTIVRDK-GRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYA 354
Query: 363 DDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSH 422
DDVKCSHGA + +++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++
Sbjct: 355 DDVKCSHGATVGRIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLAR 414
Query: 423 V 423
+
Sbjct: 415 I 415
>gi|159902620|ref|YP_001549964.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9211]
gi|159887796|gb|ABX08010.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9211]
Length = 408
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 1/207 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
V E+ + KV H + +++ ++ Q++ S Y G LS + Q
Sbjct: 193 VCEIHLDNNSKVHHGLIAMGREDSSLFAGISIFQKSDSNYFFNSFQEGWDLSHLKPTIIQ 252
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
L T+L + Q HS + D P G RQL K I A ++F+G ++V
Sbjct: 253 LEGSALTDLQGLQVAKDSQQLSTHSAVKFDGPGGTLRQLQKAI-ALDKSHSIFNGLIEVP 311
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
+ AQ+T+A QL+++LLL RA ++ KP L+IIADDV C+HGA IS+L+E +LFY Q+RG+
Sbjct: 312 KLAQKTNASQLSKNLLLSNRAQIDTKPELKIIADDVSCTHGATISNLQEDELFYLQSRGL 371
Query: 390 DLETARKALVFSFGAEVIERFPYPSIR 416
E A +V + E+I P +R
Sbjct: 372 SAENAAALIVNGYAKEIIRNIPLEVMR 398
>gi|429084465|ref|ZP_19147470.1| Iron-sulfur cluster assembly protein SufD [Cronobacter condimenti
1330]
gi|426546522|emb|CCJ73511.1| Iron-sulfur cluster assembly protein SufD [Cronobacter condimenti
1330]
Length = 424
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 181/389 (46%), Gaps = 54/389 (13%)
Query: 82 QTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDG 136
Q LL P+RK E +++T ++K + P +P S D + P LV +DG
Sbjct: 34 QQLLRLGLPTRKHENWKYTPLDGLLKHDFVMPAAQPLSR-DACDELALPVDALRLVFVDG 92
Query: 137 FI--------QNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDF----------- 171
S +S LP V + L +++ + V+
Sbjct: 93 RFAPELSDAHDGSGFEISVNDSRSGLPAPVQPEAFLHLTESLAHTVTHIRVARNQQPQKA 152
Query: 172 -----ISEFQCGDLFWSIN-------GMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGG 219
IS + GD +++ G GA + + + ++ + L + +G
Sbjct: 153 LLLMHISAGRAGDEINTVHYRHHLDLGEGAQATVIEHYVSRDAQPHFTGARLTMQVGANA 212
Query: 220 KVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 276
++ H L + S + AH + A+ + G + RHN Q G +
Sbjct: 213 QLNHYKLAFENPVSWHFAHNDLLVSQDAQAASSSFL---LGAGVLRHNTSTQLNGENITL 269
Query: 277 ELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQ 334
++S L V+++ D +R L+H +GYC RQLHK IV G+AVF+G + V ++A +
Sbjct: 270 RVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV-RDKGRAVFNGLINVAQHAIK 326
Query: 335 TDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETA 394
TD +LLL A V+ KP L+I ADDVKCSHGA + +++ Q+FY ++RGI+ + A
Sbjct: 327 TDGQMSNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINEQAA 386
Query: 395 RKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++ ++F+F AE+ E +++ QV++ +
Sbjct: 387 QQMIIFAFAAELTESIHDEALKQQVLARI 415
>gi|238753645|ref|ZP_04615007.1| hypothetical protein yruck0001_13760 [Yersinia ruckeri ATCC 29473]
gi|238708197|gb|EEQ00553.1| hypothetical protein yruck0001_13760 [Yersinia ruckeri ATCC 29473]
Length = 410
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 11/226 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L V +G ++ H L QS + AH R AS + G L+
Sbjct: 184 HFTGARLTVSVGDNAQLTHCKLAFETPQSDHFAHNDIVMGRDARASSTSFL---LGAGLT 240
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RH+ Q G ++S L V + D +R L+H +GYC RQLHK +V G+
Sbjct: 241 RHHTSTQLNGEGATLSINSLLLPVGREVCD--TRTYLEHNKGYCQSRQLHKTVVRER-GK 297
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ +P L+I ADDVKCSHGA + ++
Sbjct: 298 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTRPQLEIYADDVKCSHGATVGRIDAE 357
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
QLFY Q+RGI A++ ++F+F AE+ E IR +V+ + +
Sbjct: 358 QLFYLQSRGISQADAQQMIIFAFAAELTEAIGNDIIRQRVMERIAD 403
>gi|316934378|ref|YP_004109360.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
gi|315602092|gb|ADU44627.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
Length = 437
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 186/420 (44%), Gaps = 56/420 (13%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQ 111
++ D+ ++ + LP L + R + P R+ E +++TD SM + +
Sbjct: 12 DTASDNFAAAGARLPVAGKLDETRRQALDVFQRIGLPHRRIEDWKYTDLRASMREVLPVA 71
Query: 112 P------ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG------ 159
P + R ++ + A LVL+DG + +L+ L G+ + SL
Sbjct: 72 PAPDASALVRAEAAAGLHAIAGVRRLVLVDGALAPGLSDLAGLEAGLSIRSLREALQSGD 131
Query: 160 -------------------VSDGIMKRVSDFISEFQCGDLFWSINGMGAP---------D 191
++DG++ V+D + + + +G GAP
Sbjct: 132 DCVLSLDTADPMAALNTALMTDGVVIEVADGTTLARPLHILHIASG-GAPVAMFTRSRIA 190
Query: 192 LG------VI--YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 243
LG V+ YV EG Y + + +G ++ + + S A +I AV
Sbjct: 191 LGKDAAATVVESYVAGEGAGSYQVHDAAVIAVGDYARLDYVRIVEDSREAFNITSAAVSV 250
Query: 244 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--P 301
+ + ++TGG +SR+ V G ++ E + +LL Q D + L+++H P
Sbjct: 251 GAHAHFNAFGITTGGLVSRYQAVVTVAGSHSKVETNGVNLLNGKQHAD--TTLVMNHDVP 308
Query: 302 RGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 361
R+ + V G +VF G + V + AQQTDA +TR+LLL A V+ KP L+I
Sbjct: 309 DCVSREGFRA-VCDDRGHSVFQGRINVRQPAQQTDAKMMTRALLLSDEAEVDNKPELEIF 367
Query: 362 ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
ADDV C HGAA+ L++S LFY +ARG+ + A L+ +F E IE +R V +
Sbjct: 368 ADDVTCGHGAAVGALDDSLLFYLRARGLPQKEAEAMLIQAFVGEAIEAIADDDLRELVTA 427
>gi|347734798|ref|ZP_08867788.1| FeS assembly protein SufD [Azospirillum amazonense Y2]
gi|346922140|gb|EGY02626.1| FeS assembly protein SufD [Azospirillum amazonense Y2]
Length = 194
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 97/167 (58%), Gaps = 5/167 (2%)
Query: 249 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR-- 306
YE + TGG+LSR +V V G + L +LL Q L R DH CR
Sbjct: 11 YEACALITGGRLSRRDVAVTLAGDGAQFRLHGAYLLDGGQEATLSVRA--DHLGLGCRTE 68
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
++ K ++A + VF G V V A TDA QL R+LLL P+A V+ KP L+I+ADDVK
Sbjct: 69 EVVKGVLAGA-SHGVFLGTVAVAPGADGTDARQLNRNLLLSPQARVDTKPELEILADDVK 127
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
CSHGA + L+E+ LFY QARGID ETAR+ LV +F + I+ P
Sbjct: 128 CSHGATVGSLDEASLFYLQARGIDPETARRMLVEAFAVDAIDAAGLP 174
>gi|312969706|ref|ZP_07783889.1| feS assembly protein SufD [Escherichia coli 1827-70]
gi|310337991|gb|EFQ03080.1| feS assembly protein SufD [Escherichia coli 1827-70]
Length = 423
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +R QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLRQQVLARI 414
>gi|420149517|ref|ZP_14656693.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|394753740|gb|EJF37247.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 335 str.
F0486]
Length = 433
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V E + K + + LQN SL A+ I T + QE S + S GG L+R+N++
Sbjct: 209 NAVTEAFVAKDAFLDYYKLQNDSLTASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G E+ L +L + Q D ++ + +P Q +K IV + VF+G +
Sbjct: 269 YHQGEHLESTLKGLSILKATQHTDHYTLVNHAYPNCESHQDYKSIV-NDEATNVFNGKIM 327
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L LFY Q R
Sbjct: 328 VEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTR 387
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GI + A L ++F V+E P++ + + + +G T
Sbjct: 388 GIGKKEASALLTYAFANTVLESVSIPALSGYINAIIAEKLGVT 430
>gi|227327028|ref|ZP_03831052.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 448
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVA 314
G L+RHN Q G T ++S L V + D +R L+H +GY RQLHK IV
Sbjct: 268 GAGLTRHNTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV- 324
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +AVF+G +KV +A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 325 NDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIG 384
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A++ ++F+F AEV E S+R+ V+ +
Sbjct: 385 RMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIESESLRDVVLERI 433
>gi|213962936|ref|ZP_03391196.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
gi|213954593|gb|EEB65915.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
Length = 433
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V E + K + + LQN SL+A+ I T + QE S + S GG L+R+N++
Sbjct: 209 NAVTEAFVAKEAFLDYYKLQNDSLSASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G E+ L +L Q D ++ + +P Q +K IV+ VF+G +
Sbjct: 269 YHQGEHLESTLKGLSILKGSQHTDHYTLVNHAYPNCESHQDYKSIVSDE-ATNVFNGKIM 327
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L LFY Q R
Sbjct: 328 VEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTR 387
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GI + A L ++F V+E P++ + + + +G T
Sbjct: 388 GIGKKEAAALLTYAFANTVLESVKIPALSAYINAIIAEKLGVT 430
>gi|429086289|ref|ZP_19149021.1| Iron-sulfur cluster assembly protein SufD [Cronobacter universalis
NCTC 9529]
gi|426506092|emb|CCK14133.1| Iron-sulfur cluster assembly protein SufD [Cronobacter universalis
NCTC 9529]
Length = 337
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 163 GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 219
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 220 RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 279
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 280 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 328
>gi|425076289|ref|ZP_18479392.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425086922|ref|ZP_18490015.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405591998|gb|EKB65450.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405603646|gb|EKB76767.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 424
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHQTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V A +TD +LLL A ++ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEIDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E ++R QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARI 415
>gi|227111736|ref|ZP_03825392.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 448
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVA 314
G L+RHN Q G T ++S L V + D +R L+H +GY RQLHK IV
Sbjct: 268 GAGLTRHNTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV- 324
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +AVF+G +KV +A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 325 NDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIG 384
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A++ ++F+F AEV E S+R+ V+ +
Sbjct: 385 RMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDVVLERI 433
>gi|424035753|ref|ZP_17774922.1| feS assembly protein SufD [Vibrio cholerae HENC-02]
gi|408897418|gb|EKM33204.1| feS assembly protein SufD [Vibrio cholerae HENC-02]
Length = 415
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 5/178 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G+L+RH+ Q G +TE E++S L QT D +R L+H +G+C +QLHK I+A
Sbjct: 241 AGQLTRHHTSCQLNGENTEIEINSLALPSHQQTYD--TRTYLEHNKGHCTSQQLHK-IIA 297
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV A +TD +LLL VN KP L+I ADDVKCSHG
Sbjct: 298 SQQGKAVFNGMIKVAPNALKTDGQMDNHNLLLSKACEVNSKPQLEIYADDVKCSHGTTTG 357
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
L + Q+FY QARG+ A + + +F AEV E IR V+ H+++ + +
Sbjct: 358 ALSKEQVFYLQARGLPKHQAEQLITLAFAAEVAEAIDIDVIRTLVLQHIESKLAEVNA 415
>gi|387829594|ref|YP_003349531.1| hypothetical protein ECSF_1541 [Escherichia coli SE15]
gi|432500041|ref|ZP_19741801.1| FeS cluster assembly protein sufD [Escherichia coli KTE216]
gi|432694432|ref|ZP_19929639.1| FeS cluster assembly protein sufD [Escherichia coli KTE162]
gi|432919106|ref|ZP_20123237.1| FeS cluster assembly protein sufD [Escherichia coli KTE173]
gi|432926913|ref|ZP_20128453.1| FeS cluster assembly protein sufD [Escherichia coli KTE175]
gi|432981089|ref|ZP_20169865.1| FeS cluster assembly protein sufD [Escherichia coli KTE211]
gi|433096504|ref|ZP_20282702.1| FeS cluster assembly protein sufD [Escherichia coli KTE139]
gi|433105871|ref|ZP_20291862.1| FeS cluster assembly protein sufD [Escherichia coli KTE148]
gi|281178751|dbj|BAI55081.1| conserved hypothetical protein [Escherichia coli SE15]
gi|431028911|gb|ELD41943.1| FeS cluster assembly protein sufD [Escherichia coli KTE216]
gi|431234631|gb|ELF30025.1| FeS cluster assembly protein sufD [Escherichia coli KTE162]
gi|431444420|gb|ELH25442.1| FeS cluster assembly protein sufD [Escherichia coli KTE173]
gi|431445140|gb|ELH26067.1| FeS cluster assembly protein sufD [Escherichia coli KTE175]
gi|431491844|gb|ELH71447.1| FeS cluster assembly protein sufD [Escherichia coli KTE211]
gi|431617203|gb|ELI86223.1| FeS cluster assembly protein sufD [Escherichia coli KTE139]
gi|431629095|gb|ELI97461.1| FeS cluster assembly protein sufD [Escherichia coli KTE148]
Length = 423
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVTQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|420366564|ref|ZP_14867401.1| feS assembly protein SufD [Shigella flexneri 1235-66]
gi|391324080|gb|EIQ80691.1| feS assembly protein SufD [Shigella flexneri 1235-66]
Length = 388
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 214 GGAVLRHNTSTQLNGENSTLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 271
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ +P L+I ADDVKCSHGA +
Sbjct: 272 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTRPQLEIYADDVKCSHGATVG 330
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI + A++ ++++F AE+ E +++ QV++ +
Sbjct: 331 RIDDEQMFYLRSRGIGQQDAQQMILYAFAAELTEALSDETLKQQVLARI 379
>gi|429100209|ref|ZP_19162183.1| Iron-sulfur cluster assembly protein SufD [Cronobacter turicensis
564]
gi|426286858|emb|CCJ88296.1| Iron-sulfur cluster assembly protein SufD [Cronobacter turicensis
564]
Length = 424
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 199/422 (47%), Gaps = 68/422 (16%)
Query: 60 LPSSSSSLPQPLPL---------QKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQ 109
LP+SS++L Q L Q+ R+ Q LL P+RK E +++T ++K
Sbjct: 4 LPNSSNALQQWHRLFEAQGGERSQEAREHLQQ-LLRLGLPTRKHEDWKYTPLDGLLKHDF 62
Query: 110 IQPITRPSSSLDVSTDAQFP----SLVLIDGFI--------QNSALNLS------NLPDG 151
+ P S ++S A P LV IDG NS +S LP
Sbjct: 63 VAPAAAALSREELSALA-LPVDALRLVFIDGRFAPDLSDATDNSGFEISVNDSRSGLPAP 121
Query: 152 VYVGSLLGVSDGIMKRVSDF----------------ISEFQCGDLFWSIN-------GMG 188
V + L +++ + + V+ IS + GD +++ G
Sbjct: 122 VQPEAFLHLTESLAQSVTHIRVARNQQPSKALLLMHISAGRAGDEINTVHYRHHLDLDEG 181
Query: 189 APDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT--AVRQET- 245
A + + + ++ + L + +G ++ H L ++ + H V Q+
Sbjct: 182 AQATVIEHYVSRDAQPHFTGARLTMQVGANAQLNHYKLAFENPVSWHFAHNDLVVSQDAH 241
Query: 246 --ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 303
+S Y L G + RHN Q G + ++S L V+++ D +R L+H +G
Sbjct: 242 AASSSYLL-----GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKG 294
Query: 304 YC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 361
YC RQLHK IV G+AVF+G +KV ++A +TD +LLL A V+ KP L+I
Sbjct: 295 YCNSRQLHKTIV-RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIY 353
Query: 362 ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
ADDVKCSHGA + +++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++
Sbjct: 354 ADDVKCSHGATVGRIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDDALKQQVLA 413
Query: 422 HV 423
+
Sbjct: 414 RI 415
>gi|429115293|ref|ZP_19176211.1| Iron-sulfur cluster assembly protein SufD [Cronobacter sakazakii
701]
gi|426318422|emb|CCK02324.1| Iron-sulfur cluster assembly protein SufD [Cronobacter sakazakii
701]
Length = 337
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 163 GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 219
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 220 RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 279
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 280 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 328
>gi|424032173|ref|ZP_17771593.1| feS assembly protein SufD [Vibrio cholerae HENC-01]
gi|408876178|gb|EKM15307.1| feS assembly protein SufD [Vibrio cholerae HENC-01]
Length = 426
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 101/177 (57%), Gaps = 5/177 (2%)
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 315
G+L+RH+ Q G +TE E++S L QT D +R L+H +G+C +QLHK I+A
Sbjct: 253 GQLTRHHTSCQLNGENTEIEINSLALPSHQQTYD--TRTYLEHNKGHCTSQQLHK-IIAS 309
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
G+AVF+G +KV A +TD +LLL VN KP L+I ADDVKCSHG
Sbjct: 310 QQGKAVFNGMIKVAPNALKTDGQMDNHNLLLSKACEVNSKPQLEIYADDVKCSHGTTTGA 369
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
L + Q+FY QARG+ A + + +F AEV E IR V+ H+++ + +
Sbjct: 370 LSKEQVFYLQARGLPKHQAEQLITLAFAAEVAEAIDIDVIRTLVLQHIESKLAEVNA 426
>gi|22125829|ref|NP_669252.1| cysteine desulfurase [Yersinia pestis KIM10+]
gi|45441979|ref|NP_993518.1| cysteine desulfurase [Yersinia pestis biovar Microtus str. 91001]
gi|108807741|ref|YP_651657.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Antiqua]
gi|108812018|ref|YP_647785.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Nepal516]
gi|145598050|ref|YP_001162126.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Pestoides F]
gi|162421329|ref|YP_001607000.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Angola]
gi|165927487|ref|ZP_02223319.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939482|ref|ZP_02228028.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011824|ref|ZP_02232722.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210931|ref|ZP_02236966.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400942|ref|ZP_02306448.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422191|ref|ZP_02313944.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424946|ref|ZP_02316699.1| FeS assembly protein SufD [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229837926|ref|ZP_04458085.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229895086|ref|ZP_04510262.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|229898487|ref|ZP_04513632.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902330|ref|ZP_04517450.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|270490490|ref|ZP_06207564.1| FeS assembly protein SufD [Yersinia pestis KIM D27]
gi|284987069|ref|YP_002347366.2| cysteine desulfurase [Yersinia pestis CO92]
gi|294503595|ref|YP_003567657.1| hypothetical protein YPZ3_1485 [Yersinia pestis Z176003]
gi|384122041|ref|YP_005504661.1| hypothetical protein YPD4_1450 [Yersinia pestis D106004]
gi|384125957|ref|YP_005508571.1| hypothetical protein YPD8_1495 [Yersinia pestis D182038]
gi|384139772|ref|YP_005522474.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis A1122]
gi|384414552|ref|YP_005623914.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420547340|ref|ZP_15045241.1| FeS assembly protein SufD [Yersinia pestis PY-01]
gi|420552669|ref|ZP_15049999.1| FeS assembly protein SufD [Yersinia pestis PY-02]
gi|420558207|ref|ZP_15054855.1| FeS assembly protein SufD [Yersinia pestis PY-03]
gi|420563687|ref|ZP_15059726.1| FeS assembly protein SufD [Yersinia pestis PY-04]
gi|420568725|ref|ZP_15064297.1| FeS assembly protein SufD [Yersinia pestis PY-05]
gi|420574379|ref|ZP_15069418.1| FeS assembly protein SufD [Yersinia pestis PY-06]
gi|420579690|ref|ZP_15074239.1| FeS assembly protein SufD [Yersinia pestis PY-07]
gi|420585032|ref|ZP_15079086.1| FeS assembly protein SufD [Yersinia pestis PY-08]
gi|420590157|ref|ZP_15083698.1| FeS assembly protein SufD [Yersinia pestis PY-09]
gi|420595552|ref|ZP_15088554.1| FeS assembly protein SufD [Yersinia pestis PY-10]
gi|420601190|ref|ZP_15093576.1| FeS assembly protein SufD [Yersinia pestis PY-11]
gi|420606634|ref|ZP_15098476.1| FeS assembly protein SufD [Yersinia pestis PY-12]
gi|420612034|ref|ZP_15103336.1| FeS assembly protein SufD [Yersinia pestis PY-13]
gi|420617390|ref|ZP_15108038.1| feS assembly protein SufD [Yersinia pestis PY-14]
gi|420622710|ref|ZP_15112787.1| FeS assembly protein SufD [Yersinia pestis PY-15]
gi|420627795|ref|ZP_15117398.1| FeS assembly protein SufD [Yersinia pestis PY-16]
gi|420632900|ref|ZP_15121996.1| feS assembly protein SufD [Yersinia pestis PY-19]
gi|420638115|ref|ZP_15126672.1| feS assembly protein SufD [Yersinia pestis PY-25]
gi|420643641|ref|ZP_15131697.1| feS assembly protein SufD [Yersinia pestis PY-29]
gi|420648863|ref|ZP_15136435.1| feS assembly protein SufD [Yersinia pestis PY-32]
gi|420654513|ref|ZP_15141511.1| feS assembly protein SufD [Yersinia pestis PY-34]
gi|420659990|ref|ZP_15146432.1| feS assembly protein SufD [Yersinia pestis PY-36]
gi|420665305|ref|ZP_15151196.1| feS assembly protein SufD [Yersinia pestis PY-42]
gi|420670198|ref|ZP_15155643.1| feS assembly protein SufD [Yersinia pestis PY-45]
gi|420675544|ref|ZP_15160506.1| FeS assembly protein SufD [Yersinia pestis PY-46]
gi|420681135|ref|ZP_15165570.1| feS assembly protein SufD [Yersinia pestis PY-47]
gi|420686431|ref|ZP_15170295.1| feS assembly protein SufD [Yersinia pestis PY-48]
gi|420691640|ref|ZP_15174880.1| feS assembly protein SufD [Yersinia pestis PY-52]
gi|420697424|ref|ZP_15179954.1| FeS assembly protein SufD [Yersinia pestis PY-53]
gi|420703077|ref|ZP_15184572.1| feS assembly protein SufD [Yersinia pestis PY-54]
gi|420708678|ref|ZP_15189374.1| FeS assembly protein SufD [Yersinia pestis PY-55]
gi|420714084|ref|ZP_15194206.1| FeS assembly protein SufD [Yersinia pestis PY-56]
gi|420719563|ref|ZP_15198951.1| FeS assembly protein SufD [Yersinia pestis PY-58]
gi|420725079|ref|ZP_15203756.1| FeS assembly protein SufD [Yersinia pestis PY-59]
gi|420730683|ref|ZP_15208772.1| FeS assembly protein SufD [Yersinia pestis PY-60]
gi|420735706|ref|ZP_15213319.1| FeS assembly protein SufD [Yersinia pestis PY-61]
gi|420741183|ref|ZP_15218242.1| FeS assembly protein SufD [Yersinia pestis PY-63]
gi|420746768|ref|ZP_15223026.1| FeS assembly protein SufD [Yersinia pestis PY-64]
gi|420752334|ref|ZP_15227920.1| FeS assembly protein SufD [Yersinia pestis PY-65]
gi|420757915|ref|ZP_15232529.1| FeS assembly protein SufD [Yersinia pestis PY-66]
gi|420763386|ref|ZP_15237200.1| FeS assembly protein SufD [Yersinia pestis PY-71]
gi|420768578|ref|ZP_15241874.1| FeS assembly protein SufD [Yersinia pestis PY-72]
gi|420773593|ref|ZP_15246397.1| FeS assembly protein SufD [Yersinia pestis PY-76]
gi|420779153|ref|ZP_15251313.1| FeS assembly protein SufD [Yersinia pestis PY-88]
gi|420784742|ref|ZP_15256208.1| FeS assembly protein SufD [Yersinia pestis PY-89]
gi|420789956|ref|ZP_15260861.1| FeS assembly protein SufD [Yersinia pestis PY-90]
gi|420795462|ref|ZP_15265817.1| FeS assembly protein SufD [Yersinia pestis PY-91]
gi|420800520|ref|ZP_15270357.1| FeS assembly protein SufD [Yersinia pestis PY-92]
gi|420805910|ref|ZP_15275229.1| FeS assembly protein SufD [Yersinia pestis PY-93]
gi|420811212|ref|ZP_15280010.1| feS assembly protein SufD [Yersinia pestis PY-94]
gi|420816778|ref|ZP_15285017.1| FeS assembly protein SufD [Yersinia pestis PY-95]
gi|420822076|ref|ZP_15289788.1| FeS assembly protein SufD [Yersinia pestis PY-96]
gi|420827162|ref|ZP_15294346.1| FeS assembly protein SufD [Yersinia pestis PY-98]
gi|420832865|ref|ZP_15299504.1| FeS assembly protein SufD [Yersinia pestis PY-99]
gi|420837720|ref|ZP_15303892.1| FeS assembly protein SufD [Yersinia pestis PY-100]
gi|420842903|ref|ZP_15308589.1| FeS assembly protein SufD [Yersinia pestis PY-101]
gi|420848558|ref|ZP_15313675.1| FeS assembly protein SufD [Yersinia pestis PY-102]
gi|420854084|ref|ZP_15318428.1| FeS assembly protein SufD [Yersinia pestis PY-103]
gi|420859410|ref|ZP_15323054.1| FeS assembly protein SufD [Yersinia pestis PY-113]
gi|421763895|ref|ZP_16200687.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis INS]
gi|21958758|gb|AAM85503.1|AE013796_6 hypothetical protein y1937 [Yersinia pestis KIM10+]
gi|45436842|gb|AAS62395.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Yersinia pestis biovar
Microtus str. 91001]
gi|108775666|gb|ABG18185.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Nepal516]
gi|108779654|gb|ABG13712.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Antiqua]
gi|145209746|gb|ABP39153.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Pestoides F]
gi|162354144|gb|ABX88092.1| FeS assembly protein SufD [Yersinia pestis Angola]
gi|165912531|gb|EDR31162.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
IP275]
gi|165920542|gb|EDR37819.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989289|gb|EDR41590.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208111|gb|EDR52591.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166959003|gb|EDR56024.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049795|gb|EDR61203.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056133|gb|EDR65911.1| FeS assembly protein SufD [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680665|gb|EEO76761.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|229688035|gb|EEO80106.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694292|gb|EEO84339.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701848|gb|EEO89871.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|262361637|gb|ACY58358.1| hypothetical protein YPD4_1450 [Yersinia pestis D106004]
gi|262365621|gb|ACY62178.1| hypothetical protein YPD8_1495 [Yersinia pestis D182038]
gi|270338994|gb|EFA49771.1| FeS assembly protein SufD [Yersinia pestis KIM D27]
gi|294354054|gb|ADE64395.1| hypothetical protein YPZ3_1485 [Yersinia pestis Z176003]
gi|320015056|gb|ADV98627.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342854901|gb|AEL73454.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis A1122]
gi|391425371|gb|EIQ87653.1| FeS assembly protein SufD [Yersinia pestis PY-01]
gi|391426758|gb|EIQ88919.1| FeS assembly protein SufD [Yersinia pestis PY-02]
gi|391427629|gb|EIQ89698.1| FeS assembly protein SufD [Yersinia pestis PY-03]
gi|391440704|gb|EIR01253.1| FeS assembly protein SufD [Yersinia pestis PY-04]
gi|391442227|gb|EIR02648.1| FeS assembly protein SufD [Yersinia pestis PY-05]
gi|391445614|gb|EIR05723.1| FeS assembly protein SufD [Yersinia pestis PY-06]
gi|391457780|gb|EIR16695.1| FeS assembly protein SufD [Yersinia pestis PY-07]
gi|391458744|gb|EIR17582.1| FeS assembly protein SufD [Yersinia pestis PY-08]
gi|391460926|gb|EIR19584.1| FeS assembly protein SufD [Yersinia pestis PY-09]
gi|391473883|gb|EIR31223.1| FeS assembly protein SufD [Yersinia pestis PY-10]
gi|391475433|gb|EIR32637.1| FeS assembly protein SufD [Yersinia pestis PY-11]
gi|391476268|gb|EIR33404.1| FeS assembly protein SufD [Yersinia pestis PY-12]
gi|391489853|gb|EIR45559.1| FeS assembly protein SufD [Yersinia pestis PY-13]
gi|391490977|gb|EIR46581.1| FeS assembly protein SufD [Yersinia pestis PY-15]
gi|391492841|gb|EIR48251.1| feS assembly protein SufD [Yersinia pestis PY-14]
gi|391505298|gb|EIR59324.1| FeS assembly protein SufD [Yersinia pestis PY-16]
gi|391506197|gb|EIR60141.1| feS assembly protein SufD [Yersinia pestis PY-19]
gi|391510762|gb|EIR64261.1| feS assembly protein SufD [Yersinia pestis PY-25]
gi|391521190|gb|EIR73680.1| feS assembly protein SufD [Yersinia pestis PY-29]
gi|391523449|gb|EIR75758.1| feS assembly protein SufD [Yersinia pestis PY-34]
gi|391524508|gb|EIR76721.1| feS assembly protein SufD [Yersinia pestis PY-32]
gi|391536501|gb|EIR87478.1| feS assembly protein SufD [Yersinia pestis PY-36]
gi|391539234|gb|EIR89973.1| feS assembly protein SufD [Yersinia pestis PY-42]
gi|391541212|gb|EIR91775.1| feS assembly protein SufD [Yersinia pestis PY-45]
gi|391554344|gb|EIS03599.1| FeS assembly protein SufD [Yersinia pestis PY-46]
gi|391554818|gb|EIS04029.1| feS assembly protein SufD [Yersinia pestis PY-47]
gi|391556111|gb|EIS05222.1| feS assembly protein SufD [Yersinia pestis PY-48]
gi|391569499|gb|EIS17078.1| feS assembly protein SufD [Yersinia pestis PY-52]
gi|391570430|gb|EIS17897.1| FeS assembly protein SufD [Yersinia pestis PY-53]
gi|391577247|gb|EIS23700.1| feS assembly protein SufD [Yersinia pestis PY-54]
gi|391583126|gb|EIS28822.1| FeS assembly protein SufD [Yersinia pestis PY-55]
gi|391586097|gb|EIS31435.1| FeS assembly protein SufD [Yersinia pestis PY-56]
gi|391597344|gb|EIS41177.1| FeS assembly protein SufD [Yersinia pestis PY-58]
gi|391599214|gb|EIS42859.1| FeS assembly protein SufD [Yersinia pestis PY-60]
gi|391600924|gb|EIS44396.1| FeS assembly protein SufD [Yersinia pestis PY-59]
gi|391613833|gb|EIS55760.1| FeS assembly protein SufD [Yersinia pestis PY-61]
gi|391614395|gb|EIS56268.1| FeS assembly protein SufD [Yersinia pestis PY-63]
gi|391618744|gb|EIS60110.1| FeS assembly protein SufD [Yersinia pestis PY-64]
gi|391626315|gb|EIS66688.1| FeS assembly protein SufD [Yersinia pestis PY-65]
gi|391633983|gb|EIS73319.1| FeS assembly protein SufD [Yersinia pestis PY-66]
gi|391637267|gb|EIS76209.1| FeS assembly protein SufD [Yersinia pestis PY-71]
gi|391639776|gb|EIS78411.1| FeS assembly protein SufD [Yersinia pestis PY-72]
gi|391649310|gb|EIS86717.1| FeS assembly protein SufD [Yersinia pestis PY-76]
gi|391653571|gb|EIS90510.1| FeS assembly protein SufD [Yersinia pestis PY-88]
gi|391658257|gb|EIS94680.1| FeS assembly protein SufD [Yersinia pestis PY-89]
gi|391662314|gb|EIS98262.1| FeS assembly protein SufD [Yersinia pestis PY-90]
gi|391670331|gb|EIT05384.1| FeS assembly protein SufD [Yersinia pestis PY-91]
gi|391679587|gb|EIT13706.1| FeS assembly protein SufD [Yersinia pestis PY-93]
gi|391680851|gb|EIT14862.1| FeS assembly protein SufD [Yersinia pestis PY-92]
gi|391681689|gb|EIT15628.1| feS assembly protein SufD [Yersinia pestis PY-94]
gi|391693499|gb|EIT26244.1| FeS assembly protein SufD [Yersinia pestis PY-95]
gi|391696682|gb|EIT29144.1| FeS assembly protein SufD [Yersinia pestis PY-96]
gi|391698302|gb|EIT30623.1| FeS assembly protein SufD [Yersinia pestis PY-98]
gi|391708969|gb|EIT40185.1| FeS assembly protein SufD [Yersinia pestis PY-99]
gi|391714258|gb|EIT44933.1| FeS assembly protein SufD [Yersinia pestis PY-100]
gi|391714657|gb|EIT45293.1| FeS assembly protein SufD [Yersinia pestis PY-101]
gi|391725697|gb|EIT55132.1| FeS assembly protein SufD [Yersinia pestis PY-102]
gi|391728944|gb|EIT57987.1| FeS assembly protein SufD [Yersinia pestis PY-103]
gi|391734202|gb|EIT62484.1| FeS assembly protein SufD [Yersinia pestis PY-113]
gi|411175209|gb|EKS45235.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis INS]
Length = 441
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 126/233 (54%), Gaps = 11/233 (4%)
Query: 205 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H ++ +S + AH R A + + G L+
Sbjct: 215 HFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGLT 271
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G+
Sbjct: 272 RHNTSSQLNGEGSSLSMNSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMVR-ERGK 328
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 329 AIFNGMIKVAKHALKTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 388
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
QLFY Q+RGI+ A++ ++F+F AEV E +IR QV++ + + V
Sbjct: 389 QLFYLQSRGINQADAQQMIIFAFAAEVTEAIHNEAIRKQVLARIAERLAWESV 441
>gi|414173284|ref|ZP_11428047.1| FeS assembly protein SufD [Afipia broomeae ATCC 49717]
gi|410891936|gb|EKS39732.1| FeS assembly protein SufD [Afipia broomeae ATCC 49717]
Length = 441
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 186/434 (42%), Gaps = 66/434 (15%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L + ++ LP P+ + R ++ P R+ E +++TD + +I P+
Sbjct: 13 ALGELFAAARGRLPGSGPVAEFRQNAFDDFARLGLPHRRIEEWKYTDLRALLR-EIAPLA 71
Query: 115 RPSSSLDVSTDAQF---------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGI 164
D++ A+ LVL+DG +++ L GV++ +L V DG
Sbjct: 72 PAPDQADLARAAKAVKSLGIDSTQKLVLVDGVFAPQLSDVTALEAGVHLRTLREVLEDGS 131
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVI----------------------------- 195
K +D + D S+N A D VI
Sbjct: 132 NKVRADLLQTSVASDAMISLNAALATDGVVIDVAEGAALAKPIHIVHVATDSGTSLVTRS 191
Query: 196 ---------------YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 240
+V AEG Y + + + IG +++H L +L+AA+I
Sbjct: 192 LLKVGKGARVTFVESFVAAEGAKSYQTHDSVVIWIGDEAELQHVRLMEDALDAANISTGI 251
Query: 241 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 300
+ ++ GG +SR+ + G +E + +LL + + D + L++DH
Sbjct: 252 FTIGAKAKLNTFNLTNGGNISRYQGFITFAGEGSELTTNGVNLLGARRHGD--TTLVVDH 309
Query: 301 PRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVK 355
+C R++ + ++ AHS VF G + V AQ+TD +TR+LLL A + K
Sbjct: 310 AVPHCSSREVFRSVLDDRAHS----VFQGRIIVRPGAQKTDGKMMTRALLLSDEAEADNK 365
Query: 356 PNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
P L+I ADDV C HGA L+ES LFY +ARG+ + A+ L+ +F E IE ++
Sbjct: 366 PELEIFADDVTCGHGATTGALDESLLFYLRARGLPEKEAQALLIAAFVGEAIESIADDNL 425
Query: 416 RNQVVSHVKNLMGT 429
R+ V+ + + T
Sbjct: 426 RDFAVAAAERWLAT 439
>gi|313675023|ref|YP_004053019.1| fes assembly protein sufd [Marivirga tractuosa DSM 4126]
gi|312941721|gb|ADR20911.1| FeS assembly protein SufD [Marivirga tractuosa DSM 4126]
Length = 441
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 187/429 (43%), Gaps = 66/429 (15%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F I ++ E SL S PL R + +P K E +++++ + +
Sbjct: 10 DKFFIGQFKAFESSLNGESKK-----PLHAKRKQAIDNFKELGFPHAKHEEYKYSNVAKM 64
Query: 106 --KSSQIQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGS 156
K + ++ S SL + +++ LV ++G + N ++ LP GV++ +
Sbjct: 65 FGKLFNVGNLSDDSFSLSLDEASKYFIPELDAIRLVFVNGVLDNKLSDMETLPKGVHIQA 124
Query: 157 LLGVSDGIMK---------------RVSDFISEFQCGDLFWSINGMG------------- 188
+ +D + S+ + F G +F I+
Sbjct: 125 IKTAADDYAEDFEKHFNTHEIEGADNFSELNTAFTNGGVFVKIDANAVVETPIACYYFND 184
Query: 189 APDLGVIYVPAE-------------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQ 229
A + VI P G + + N+V E+V+ + QN+
Sbjct: 185 AKNADVISQPRNLVIAKKNSQASLIESYVTLGENTSFTNAVTEIVMEDDCVFNYYKYQNE 244
Query: 230 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 289
S A + T V Q S + V +S G + R+N++ +ET + +LL D+
Sbjct: 245 SDQAIQVGATMVHQLGKSVFNGVTLSLNGAMLRNNLNTAIHKEHSETNMYGLYLL--DRK 302
Query: 290 QDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLE 347
+ + ++DH C +++K I+ + VF+G + V + AQ+T+A Q R+++L
Sbjct: 303 THVDNHTVVDHKVPNCESNEMYKGIL-DGQSRGVFNGKIFVRQDAQKTNAFQSNRNVVLS 361
Query: 348 PRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVI 407
A V+ KP L+I ADDV+CSHGA + L+ QLFY +ARGID TA+ L+ +F ++V+
Sbjct: 362 DDAEVDTKPQLEIWADDVQCSHGATVGQLDVDQLFYLRARGIDKHTAKSMLLNAFASDVL 421
Query: 408 ERFPYPSIR 416
+ R
Sbjct: 422 SNIKIEAFR 430
>gi|170024089|ref|YP_001720594.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis YPIII]
gi|169750623|gb|ACA68141.1| FeS assembly protein SufD [Yersinia pseudotuberculosis YPIII]
Length = 441
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 126/233 (54%), Gaps = 11/233 (4%)
Query: 205 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H ++ +S + AH R A + + G L+
Sbjct: 215 HFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGLT 271
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G+
Sbjct: 272 RHNTSSQLNGEGSSLSMNSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMVR-ERGK 328
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 329 AIFNGMIKVAKHALKTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 388
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
QLFY Q+RGI+ A++ ++F+F AEV E +IR QV++ + + V
Sbjct: 389 QLFYLQSRGINQADAQQMIIFAFAAEVTEAIHNEAIRKQVLARIAERLAWESV 441
>gi|440759888|ref|ZP_20939010.1| Iron-sulfur cluster assembly protein SufD [Pantoea agglomerans
299R]
gi|436426362|gb|ELP24077.1| Iron-sulfur cluster assembly protein SufD [Pantoea agglomerans
299R]
Length = 426
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 104/178 (58%), Gaps = 5/178 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G LSRHN Q G +T ++S L V + D +R L+H +G+C RQ+HK IV
Sbjct: 252 GAGLSRHNTSTQLNGENTTLAINSLVLPVKQEVAD--TRTYLEHNKGHCMSRQMHKTIVR 309
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G++KV ++A +TD +LLL + V+ KP L+I ADDVKCSHGA I
Sbjct: 310 DK-GRAVFNGHIKVAQHALKTDGQMTNNNLLLGKLSEVDTKPQLEIYADDVKCSHGATIG 368
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
+++ Q+FY ++RGI+ + A+ ++ +F AE+ E +R V+ + DV
Sbjct: 369 RIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTETLENSVMRQAVLQRIAERFPGGDV 426
>gi|429108528|ref|ZP_19170397.1| Iron-sulfur cluster assembly protein SufD [Cronobacter malonaticus
681]
gi|426295251|emb|CCJ96510.1| Iron-sulfur cluster assembly protein SufD [Cronobacter malonaticus
681]
Length = 424
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 250 GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 367 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 415
>gi|429096043|ref|ZP_19158149.1| Iron-sulfur cluster assembly protein SufD [Cronobacter dublinensis
582]
gi|426282383|emb|CCJ84262.1| Iron-sulfur cluster assembly protein SufD [Cronobacter dublinensis
582]
Length = 287
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 113 GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 169
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 170 RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 229
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 230 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 278
>gi|156934261|ref|YP_001438177.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
sakazakii ATCC BAA-894]
gi|156532515|gb|ABU77341.1| hypothetical protein ESA_02091 [Cronobacter sakazakii ATCC BAA-894]
Length = 424
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 250 GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 367 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 415
>gi|403058994|ref|YP_006647211.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806320|gb|AFR03958.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 448
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVA 314
G L+RHN Q G T ++S L V + D +R L+H +GY RQLHK IV
Sbjct: 268 GAGLTRHNTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV- 324
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +AVF+G +KV +A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 325 NDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIG 384
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A++ ++F+F AEV E S+R+ V+ +
Sbjct: 385 RMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDVVLERI 433
>gi|149365689|ref|ZP_01887724.1| hypothetical protein YPE_0859 [Yersinia pestis CA88-4125]
gi|115348102|emb|CAL21029.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|149292102|gb|EDM42176.1| hypothetical protein YPE_0859 [Yersinia pestis CA88-4125]
Length = 407
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 126/233 (54%), Gaps = 11/233 (4%)
Query: 205 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H ++ +S + AH R A + + G L+
Sbjct: 181 HFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGLT 237
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G+
Sbjct: 238 RHNTSSQLNGEGSSLSMNSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMVR-ERGK 294
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 295 AIFNGMIKVAKHALKTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 354
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
QLFY Q+RGI+ A++ ++F+F AEV E +IR QV++ + + V
Sbjct: 355 QLFYLQSRGINQADAQQMIIFAFAAEVTEAIHNEAIRKQVLARIAERLAWESV 407
>gi|339018835|ref|ZP_08644958.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter tropicalis
NBRC 101654]
gi|338752049|dbj|GAA08262.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter tropicalis
NBRC 101654]
Length = 424
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 2/226 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y N V+E+ + + H +Q +S +AA + + E Y+ + G L
Sbjct: 193 GQGRYLHNPVMELSVAANATLNHVTIQTESDDAACLATLYAQIEERGSYDSFVLGLGAAL 252
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
SRH VH + P E ++ L+ Q D+ S + P RQ + ++ +
Sbjct: 253 SRHEVHARLNAPHAEVHVNGAQRLLGRQVGDVTSVITHAAPDCRSRQTVQNVL-DGQSRG 311
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G V V R AQ+TD Q+ ++LLL +A ++ KP L+I ADDVKCSHGA + L++ Q
Sbjct: 312 VFQGKVLVERIAQKTDGYQMNQALLLSEQAEIDAKPELEIYADDVKCSHGATVGALDDEQ 371
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNL 426
+FY ++RG+ AR+ L+ +F AE + P ++ + +H+ +
Sbjct: 372 MFYLRSRGVPEAEARQILIHAFLAEALALIP-DAMAQTLAAHIMEI 416
>gi|146298940|ref|YP_001193531.1| FeS assembly protein SufD [Flavobacterium johnsoniae UW101]
gi|146153358|gb|ABQ04212.1| FeS assembly protein SufD [Flavobacterium johnsoniae UW101]
Length = 438
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 5/223 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +QN + A I T V Q+ S + S GG L+R+N++
Sbjct: 212 NSVTEIFAQKRAIVDYYKIQNDNNEANLIDNTYVSQQQESHASVHTFSFGGNLTRNNLNF 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGN 325
G + L+ +L Q D ++ L++H + C Q +K I + VF+G
Sbjct: 272 YHYGERLTSTLNGISILNDKQHVDHYT--LVNHAQPNCESFQDYKGIFSDR-STGVFNGK 328
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V + AQ+T+A Q + ++LL +AT+N KP L+I ADDVKCSHG + L+E+ +FY Q
Sbjct: 329 VLVEKEAQKTNAFQKSNNILLSDKATINAKPQLEIFADDVKCSHGCTVGQLDETAMFYMQ 388
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+RGI + A+ L+++F VIE P ++ ++ + +G
Sbjct: 389 SRGIPKKEAKALLMYAFSNAVIESIKIPELKQRITKIIATKLG 431
>gi|304397639|ref|ZP_07379516.1| FeS assembly protein SufD [Pantoea sp. aB]
gi|304354811|gb|EFM19181.1| FeS assembly protein SufD [Pantoea sp. aB]
Length = 426
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 104/178 (58%), Gaps = 5/178 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G LSRHN Q G +T ++S L V + D +R L+H +G+C RQ+HK IV
Sbjct: 252 GAGLSRHNTSTQLNGENTTLAINSLVLPVKQEVAD--TRTYLEHNKGHCMSRQMHKTIVR 309
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G++KV ++A +TD +LLL + V+ KP L+I ADDVKCSHGA I
Sbjct: 310 DK-GRAVFNGHIKVAQHALKTDGQMTNNNLLLGKLSEVDTKPQLEIYADDVKCSHGATIG 368
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
+++ Q+FY ++RGI+ + A+ ++ +F AE+ E +R V+ + DV
Sbjct: 369 RIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTETLENTVMRQAVLQRIAERFPGGDV 426
>gi|392954869|ref|ZP_10320420.1| hypothetical protein WQQ_44920 [Hydrocarboniphaga effusa AP103]
gi|391857526|gb|EIT68057.1| hypothetical protein WQQ_44920 [Hydrocarboniphaga effusa AP103]
Length = 398
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 178/372 (47%), Gaps = 29/372 (7%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA--- 126
P L++ R + Q +P+RK E +++TD S + ++ S+S D ++ +
Sbjct: 16 PADLREARREAWQRFEQLGFPTRKQEDWKYTDLSALNAANY--ALEASTSFDAASPSPAL 73
Query: 127 -QFPSLVLIDGFIQNSAL---NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFW 182
+ +L I+G +N + + D V + V DG+ R+ Q L
Sbjct: 74 SGWDALRFINGRRENGEAAPPSAKLIDDSVSALNAALVRDGLDLRIG---RNQQSKPLLL 130
Query: 183 SIN----GM-----------GAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQ 227
++ GM GA ++ + ++G++ + SV E+ + K+R +Q
Sbjct: 131 TLASGSAGMSHLRHRLHLESGAEATVLLDLRSDGSESL-STSVFEIELEANSKLRLLRIQ 189
Query: 228 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 287
+ + T V + + ++ V + GG L RH+++V GP T +
Sbjct: 190 DLGDKNTDLTRTEVHVQRDAHFDYVGLDLGGALVRHDLNVFLDGPGAATNVHGVFAPGGR 249
Query: 288 QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLE 347
D H+R+ P R++ + +V AVF+G + V++ AQ+TD+ Q +LLL
Sbjct: 250 SHFDTHTRIHHVAPHTTSREIFRGLV-RDKANAVFNGKIVVHKDAQKTDSEQNVATLLLA 308
Query: 348 PRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVI 407
P A +N KP L+I ADDVKC+HGA L+E ++Y ++RG+D+ETAR L+++F V+
Sbjct: 309 PGAQINAKPELEIYADDVKCAHGATCGQLDEMAVYYLRSRGLDVETARNVLLYTFAHTVL 368
Query: 408 ERFPYPSIRNQV 419
+ RN++
Sbjct: 369 SQVSDEQARNEM 380
>gi|415843903|ref|ZP_11523726.1| feS assembly protein SufD [Shigella sonnei 53G]
gi|323169249|gb|EFZ54925.1| feS assembly protein SufD [Shigella sonnei 53G]
Length = 388
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 183/387 (47%), Gaps = 55/387 (14%)
Query: 84 LLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG-- 136
+L T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 1 MLRTGLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDA--VRLVFVDGRY 58
Query: 137 ------FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDF------------- 171
I+ S +S LPD + L +++ + + V+
Sbjct: 59 VPALSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLL 118
Query: 172 ---ISEFQCGDLFWSINGMGAPDLG------VIYVPAEGNDC-YWANSVLEVVIGKGGKV 221
I++ G+ + + DL VI ND ++ + + + +
Sbjct: 119 LMHITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHL 178
Query: 222 RHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETEL 278
+H L + S + AH TA + + GG + RHN Q G ++ +
Sbjct: 179 QHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGAVLRHNTSTQLNGENSTLRI 235
Query: 279 SSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTD 336
+S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G + V ++A +TD
Sbjct: 236 NSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNGLINVAQHAIKTD 292
Query: 337 AGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARK 396
+LL+ A V+ KP L+I ADDVKCSHGA + +++ Q+FY ++RGI+ + A++
Sbjct: 293 GQMTNNNLLMGKMAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQ 352
Query: 397 ALVFSFGAEVIERFPYPSIRNQVVSHV 423
++++F AE+ E ++ QV++ +
Sbjct: 353 MIIYAFAAELTEALRDEGLKQQVLARI 379
>gi|126665740|ref|ZP_01736721.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
gi|126629674|gb|EBA00291.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
Length = 433
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 182/410 (44%), Gaps = 57/410 (13%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L S+ +LP+PL LR + + L P+R+ E ++++ + + ++ ++S
Sbjct: 12 LQSAGQALPEPLL--ALRANRASALTDLLLPTRRTENWKYSAKHLKLTDEMASSLPLNAS 69
Query: 120 LDVSTDAQFPSLVLIDGFIQNSALNLSNLP-------------DGVYVGSLLG--VSDGI 164
D Q ++VL++G ++ A N L D LLG +SD
Sbjct: 70 AGAEADIQGYTVVLVNGVVRPEASNYPALEGLSIQRFSDLNGDDAELAADLLGKSISDQP 129
Query: 165 MKRVSDFIS-----EFQCGDL------------FWSINGMGAPDLG----VIYVPA---- 199
K S +S F+ G L + ++ A G I V A
Sbjct: 130 AKHGSINLSLLNAARFEDGLLIQLQPGTVLDQPLFVVHHTSASHSGSAFPCILVAAGSNS 189
Query: 200 ----------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G N+ E +G G V L + N H+ T VRQ+ S +
Sbjct: 190 QLTLVEDYVSSGESPVMVNTATEFSLGDGANVTSVRLNTEGQNVQHMGTTGVRQQRNSRF 249
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 307
E V GG L RH++HV+ G E +L+ ++V+ TQ + ++H +C +
Sbjct: 250 ESHSVGFGGTLRRHDLHVRLEGEGAECKLNG--VVVTQGTQHYDNHTTIEHIAAHCNSEE 307
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
++ I A A+F+G + +++ AQ+++A ++LLL A ++ KP L+I ADDVKC
Sbjct: 308 SYRNIAADK-SHAIFNGRIHIHQDAQKSNANMSNKNLLLTNGAEIDSKPELEIYADDVKC 366
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
+HGA I L+ +FY +RG+ A+ L +F E++ + P +R+
Sbjct: 367 AHGATIGQLDNDSIFYLVSRGLSPRDAKVLLTMAFINELVAQIPVEQVRD 416
>gi|383449388|ref|YP_005356109.1| Fe-S assembly protein, SufD [Flavobacterium indicum GPTSA100-9]
gi|380501010|emb|CCG52052.1| Fe-S assembly protein, SufD [Flavobacterium indicum GPTSA100-9]
Length = 438
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +QN L A + T + Q+ S + S GG ++R+N++
Sbjct: 212 NSVTEIFAQKRAIVDYYKVQNDVLTANLVDNTYIAQKQESRVAVHTFSFGGNITRNNLNF 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G ++ L ++ +Q D ++ + P Q +KCI+ VF+G +
Sbjct: 272 YHQGERIDSTLKGITIIGENQHVDHYTLVHHAQPNCESHQNYKCILDDK-ATGVFNGKIF 330
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+TDA Q ++L+ +AT+N KP L+I ADDVKCSHG I L+ES +FY Q R
Sbjct: 331 VEKEAQKTDAFQQNNNILISEKATINAKPQLEIFADDVKCSHGCTIGQLDESAMFYMQQR 390
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
GI + A+ L+++F EV P ++ ++ + + +G
Sbjct: 391 GIPKKEAKALLMYAFTNEVTSSIQIPELKAKIGRIIADKLG 431
>gi|417790449|ref|ZP_12438001.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
sakazakii E899]
gi|449308507|ref|YP_007440863.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
sakazakii SP291]
gi|333955466|gb|EGL73216.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
sakazakii E899]
gi|449098540|gb|AGE86574.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
sakazakii SP291]
Length = 424
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 250 GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 367 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 415
>gi|399949807|gb|AFP65464.1| Fe-S cluster assembly protein SufD [Chroomonas mesostigmatica
CCMP1168]
Length = 486
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 120/225 (53%), Gaps = 6/225 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
++ NS + + +G ++ + S A+ + + S + S GG LSR +
Sbjct: 266 FFDNSTTNIFLEEGAELNYVVSNQISQKASIVLSIHAELQKNSSLNFLSASIGGFLSRMS 325
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
+ + G + + + ++Q D+HSR+ ++P QLHK +V+ AVF G
Sbjct: 326 LGIDLNGSGSNCNIQGITVASNNQLSDIHSRISHNYPYSTSSQLHKNLVSGK-ASAVFAG 384
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
V+V+ A T++ QL ++LLL P + ++ P L+I +VKC+HG+ +SDL++ Q+FYF
Sbjct: 385 KVQVHNGAFDTESDQLCKTLLLSPTSKIDSMPILEINNQNVKCTHGSTVSDLDDEQIFYF 444
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
Q+RGI +E AR L F E+IE+FP ++V +GT
Sbjct: 445 QSRGISVEKARFLLTLGFVKEMIEKFP-----KELVVFFSEFLGT 484
>gi|421844124|ref|ZP_16277283.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|411775031|gb|EKS58499.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|455646355|gb|EMF25382.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
freundii GTC 09479]
Length = 423
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G +T L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GDAVLRHNTSTQLNGENTTLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI + A++ ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIGQQDAQQMILYAFAAELTEALGEETLKQQVLARI 414
>gi|157145961|ref|YP_001453280.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
koseri ATCC BAA-895]
gi|157083166|gb|ABV12844.1| hypothetical protein CKO_01714 [Citrobacter koseri ATCC BAA-895]
Length = 423
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G +T ++S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GDAVLRHNTSTQLNGENTTLRINSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI + AR+ ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIGEQDARQMILYAFAAELTEALGDDALKQQVLARI 414
>gi|415842111|ref|ZP_11522896.1| feS assembly protein SufD [Escherichia coli RN587/1]
gi|417283570|ref|ZP_12070867.1| FeS assembly protein SufD [Escherichia coli 3003]
gi|425277921|ref|ZP_18669187.1| feS assembly protein SufD [Escherichia coli ARS4.2123]
gi|323187105|gb|EFZ72421.1| feS assembly protein SufD [Escherichia coli RN587/1]
gi|386243513|gb|EII85246.1| FeS assembly protein SufD [Escherichia coli 3003]
gi|408203345|gb|EKI28400.1| feS assembly protein SufD [Escherichia coli ARS4.2123]
Length = 423
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|416301102|ref|ZP_11652877.1| Iron-sulfur cluster assembly protein SufD [Shigella flexneri CDC
796-83]
gi|417681816|ref|ZP_12331187.1| feS assembly protein SufD [Shigella boydii 3594-74]
gi|420325624|ref|ZP_14827387.1| feS assembly protein SufD [Shigella flexneri CCH060]
gi|320184432|gb|EFW59240.1| Iron-sulfur cluster assembly protein SufD [Shigella flexneri CDC
796-83]
gi|332096005|gb|EGJ01010.1| feS assembly protein SufD [Shigella boydii 3594-74]
gi|391252967|gb|EIQ12156.1| feS assembly protein SufD [Shigella flexneri CCH060]
Length = 423
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 182/386 (47%), Gaps = 59/386 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTSLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-------L 180
I+ S +S LPD + L +++ + + V+ + G L
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIA--VKRGQRPAKPLLL 154
Query: 181 FWSINGMGAPDLGVIYVP-----AEG------------NDC-YWANSVLEVVIGKGGKVR 222
+ G+ ++ + AEG ND ++ + + + ++
Sbjct: 155 MYITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQ 214
Query: 223 HSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELS 279
H L + S + AH TA + + GG + RHN Q G ++ ++
Sbjct: 215 HIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGAVLRHNTSTQLNGENSTLRIN 271
Query: 280 SFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDA 337
S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G + V ++A +TD
Sbjct: 272 SLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNGLINVAQHAIKTDG 328
Query: 338 GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKA 397
+LL+ A V+ KP L+I ADDVKCSHGA + +++ Q+FY ++RGI+ + A++
Sbjct: 329 QMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQM 388
Query: 398 LVFSFGAEVIERFPYPSIRNQVVSHV 423
++++F AE+ E ++ QV++ +
Sbjct: 389 IIYAFAAELTEALRDEGLKQQVLARI 414
>gi|110805658|ref|YP_689178.1| cysteine desulfurase [Shigella flexneri 5 str. 8401]
gi|424838083|ref|ZP_18262720.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 5a str. M90T]
gi|110615206|gb|ABF03873.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|383467135|gb|EID62156.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 5a str. M90T]
Length = 388
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 107/169 (63%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 214 GGAVLRHNTSTQLNGENSKLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 271
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 272 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 330
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 331 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 379
>gi|51596635|ref|YP_070826.1| cysteine desulfurase [Yersinia pseudotuberculosis IP 32953]
gi|186895691|ref|YP_001872803.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis PB1/+]
gi|51589917|emb|CAH21549.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|186698717|gb|ACC89346.1| FeS assembly protein SufD [Yersinia pseudotuberculosis PB1/+]
Length = 441
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 126/233 (54%), Gaps = 11/233 (4%)
Query: 205 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H ++ +S + AH R A + + G L+
Sbjct: 215 HFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGLT 271
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G+
Sbjct: 272 RHNTSSQLNGEGSSLSMNSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMVR-ERGK 328
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 329 AIFNGMIKVAKHALKTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKCSHGATVGRIDPE 388
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
QLFY Q+RGI+ A++ ++F+F AEV E +IR QV++ + + V
Sbjct: 389 QLFYLQSRGINQADAQQMIIFAFAAEVTEAIHNEAIRKQVLARIAERLAWESV 441
>gi|395230883|ref|ZP_10409182.1| FeS cluster assembly protein sufD [Citrobacter sp. A1]
gi|424732256|ref|ZP_18160835.1| cluster assembly protein sufd [Citrobacter sp. L17]
gi|394715336|gb|EJF21158.1| FeS cluster assembly protein sufD [Citrobacter sp. A1]
gi|422893414|gb|EKU33262.1| cluster assembly protein sufd [Citrobacter sp. L17]
Length = 423
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 126/224 (56%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + + +RH ++ +QS + AH TA+ + + G +
Sbjct: 197 HFTGARLTMNVAANAHLRHIKLAFENSQSHHFAHNDIQLGADATAASHSFL---LGDAVL 253
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G +T L+S + V ++ D +R L+H +GYC RQLHK IV+ G
Sbjct: 254 RHNTSTQLNGENTTLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GW 310
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + +++
Sbjct: 311 AVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDE 370
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
Q+FY ++RGI + A++ ++++F AE+ E +++ QV++ +
Sbjct: 371 QMFYLRSRGIGQQDAQQMILYAFAAELTEALGEETLKQQVLARI 414
>gi|419221373|ref|ZP_13764308.1| feS assembly protein SufD [Escherichia coli DEC8E]
gi|378067933|gb|EHW30044.1| feS assembly protein SufD [Escherichia coli DEC8E]
Length = 423
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRNEGLKQQVLARI 414
>gi|338974695|ref|ZP_08630053.1| iron-sulfur cluster assembly protein SufD [Bradyrhizobiaceae
bacterium SG-6C]
gi|338232290|gb|EGP07422.1| iron-sulfur cluster assembly protein SufD [Bradyrhizobiaceae
bacterium SG-6C]
Length = 440
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 188/431 (43%), Gaps = 70/431 (16%)
Query: 50 IQLAESLEDS----LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
+ L +S D+ ++ S LP P+ ++R ++ P R+ E +++TD +
Sbjct: 3 VALVQSTTDAPGELFAAARSRLPGSGPVAEVRQNAFDDFARRGLPHRRIEEWKYTDLRAL 62
Query: 106 --KSSQIQP------ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL 157
+ + + P +TR + ++ LVL+DG +++ L GV++ +L
Sbjct: 63 LREVAPLAPAPDQADLTRAAKAIKSLGIENTQKLVLVDGVFTPQLSDVTTLEAGVHLRTL 122
Query: 158 LGV-SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI--------------------- 195
V DG K +D + D S+N A D GV+
Sbjct: 123 REVLEDGGNKVRADLLQTSVASDAMISLNAALATD-GVVVDVAEGVTLTRPIHIVHVSTD 181
Query: 196 ------------------------YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 231
+V AEG Y + + + IG +++H L +L
Sbjct: 182 SGSSLVTRSLLKLAKGAQATLVESFVAAEGAKSYQTHDSVVIWIGDEAELQHVRLMEDAL 241
Query: 232 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 291
+AAH+ + ++ GG +SR+ ++ G +E + +LL + + D
Sbjct: 242 DAAHVTTGIFTIGAKAKLNTFNLTNGGSVSRYQGFIKFAGEGSELTTNGVNLLGARRHGD 301
Query: 292 LHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLL 346
+ L++DH +C R++ + ++ AHS VF G + V AQ+TD +TR+LLL
Sbjct: 302 --TTLVVDHAVPHCSSREVFRAVLDDRAHS----VFQGRIIVQPDAQKTDGKMMTRALLL 355
Query: 347 EPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEV 406
A + KP L+I ADDV C HGA L+ES LFY +ARG+ + A+ L+ +F E
Sbjct: 356 SDEAEADSKPELEIFADDVTCGHGATAGALDESLLFYLRARGLPEKEAQALLIAAFVGEA 415
Query: 407 IERFPYPSIRN 417
IE ++R
Sbjct: 416 IESIVDDNLRE 426
>gi|432441097|ref|ZP_19683438.1| FeS cluster assembly protein sufD [Escherichia coli KTE189]
gi|433013821|ref|ZP_20202183.1| FeS cluster assembly protein sufD [Escherichia coli KTE104]
gi|430966938|gb|ELC84300.1| FeS cluster assembly protein sufD [Escherichia coli KTE189]
gi|431531807|gb|ELI08462.1| FeS cluster assembly protein sufD [Escherichia coli KTE104]
Length = 423
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +RL +H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCDTRTRL--EHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432446218|ref|ZP_19688517.1| FeS cluster assembly protein sufD [Escherichia coli KTE191]
gi|432465671|ref|ZP_19707762.1| FeS cluster assembly protein sufD [Escherichia coli KTE205]
gi|432583773|ref|ZP_19820174.1| FeS cluster assembly protein sufD [Escherichia coli KTE57]
gi|433023454|ref|ZP_20211455.1| FeS cluster assembly protein sufD [Escherichia coli KTE106]
gi|433072792|ref|ZP_20259458.1| FeS cluster assembly protein sufD [Escherichia coli KTE129]
gi|433120222|ref|ZP_20305901.1| FeS cluster assembly protein sufD [Escherichia coli KTE157]
gi|433183241|ref|ZP_20367507.1| FeS cluster assembly protein sufD [Escherichia coli KTE85]
gi|433324108|ref|ZP_20401426.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli J96]
gi|430972491|gb|ELC89459.1| FeS cluster assembly protein sufD [Escherichia coli KTE191]
gi|430994152|gb|ELD10483.1| FeS cluster assembly protein sufD [Escherichia coli KTE205]
gi|431116943|gb|ELE20215.1| FeS cluster assembly protein sufD [Escherichia coli KTE57]
gi|431537105|gb|ELI13253.1| FeS cluster assembly protein sufD [Escherichia coli KTE106]
gi|431589355|gb|ELI60570.1| FeS cluster assembly protein sufD [Escherichia coli KTE129]
gi|431643980|gb|ELJ11667.1| FeS cluster assembly protein sufD [Escherichia coli KTE157]
gi|431708131|gb|ELJ72655.1| FeS cluster assembly protein sufD [Escherichia coli KTE85]
gi|432347367|gb|ELL41827.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli J96]
Length = 423
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|315225486|ref|ZP_07867299.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
gi|420159751|ref|ZP_14666549.1| FeS assembly protein SufD [Capnocytophaga ochracea str. Holt 25]
gi|314944584|gb|EFS96620.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
gi|394761802|gb|EJF44130.1| FeS assembly protein SufD [Capnocytophaga ochracea str. Holt 25]
Length = 433
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V EV + K + + LQN SL A+ I T + QE S + S GG L+R+N++
Sbjct: 209 NAVTEVFVAKDAFLDYYKLQNDSLTASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
E+ L +L + Q D ++ + +P Q +K IV+ VF+G +
Sbjct: 269 YHQDEHLESTLKGLSILKATQHTDHYTLVNHAYPNCESHQDYKSIVSDE-ATNVFNGKIM 327
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L LFY Q R
Sbjct: 328 VEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTR 387
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GI + A L ++F V+E P++ + + + +G T
Sbjct: 388 GIGKKEASALLTYAFANTVLESVSIPALSEYINAIIAEKLGVT 430
>gi|26247931|ref|NP_753971.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli CFT073]
gi|227885900|ref|ZP_04003705.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 83972]
gi|300994860|ref|ZP_07180973.1| FeS assembly protein SufD [Escherichia coli MS 45-1]
gi|301050988|ref|ZP_07197834.1| FeS assembly protein SufD [Escherichia coli MS 185-1]
gi|306815066|ref|ZP_07449222.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli NC101]
gi|386629372|ref|YP_006149092.1| cysteine desulfurase activator complex subunit [Escherichia coli
str. 'clone D i2']
gi|386634292|ref|YP_006154011.1| cysteine desulfurase activator complex subunit [Escherichia coli
str. 'clone D i14']
gi|386639210|ref|YP_006106008.1| FeS assembly protein SufD [Escherichia coli ABU 83972]
gi|416335805|ref|ZP_11672453.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
WV_060327]
gi|422366782|ref|ZP_16447239.1| FeS assembly protein SufD [Escherichia coli MS 153-1]
gi|432381354|ref|ZP_19624299.1| FeS cluster assembly protein sufD [Escherichia coli KTE15]
gi|432387108|ref|ZP_19629999.1| FeS cluster assembly protein sufD [Escherichia coli KTE16]
gi|432411900|ref|ZP_19654566.1| FeS cluster assembly protein sufD [Escherichia coli KTE39]
gi|432431833|ref|ZP_19674265.1| FeS cluster assembly protein sufD [Escherichia coli KTE187]
gi|432436147|ref|ZP_19678540.1| FeS cluster assembly protein sufD [Escherichia coli KTE188]
gi|432456711|ref|ZP_19698898.1| FeS cluster assembly protein sufD [Escherichia coli KTE201]
gi|432495702|ref|ZP_19737501.1| FeS cluster assembly protein sufD [Escherichia coli KTE214]
gi|432504411|ref|ZP_19746141.1| FeS cluster assembly protein sufD [Escherichia coli KTE220]
gi|432513921|ref|ZP_19751147.1| FeS cluster assembly protein sufD [Escherichia coli KTE224]
gi|432523787|ref|ZP_19760919.1| FeS cluster assembly protein sufD [Escherichia coli KTE230]
gi|432568678|ref|ZP_19805196.1| FeS cluster assembly protein sufD [Escherichia coli KTE53]
gi|432592853|ref|ZP_19829172.1| FeS cluster assembly protein sufD [Escherichia coli KTE60]
gi|432607508|ref|ZP_19843697.1| FeS cluster assembly protein sufD [Escherichia coli KTE67]
gi|432611423|ref|ZP_19847586.1| FeS cluster assembly protein sufD [Escherichia coli KTE72]
gi|432646187|ref|ZP_19881977.1| FeS cluster assembly protein sufD [Escherichia coli KTE86]
gi|432651119|ref|ZP_19886876.1| FeS cluster assembly protein sufD [Escherichia coli KTE87]
gi|432655765|ref|ZP_19891471.1| FeS cluster assembly protein sufD [Escherichia coli KTE93]
gi|432699041|ref|ZP_19934199.1| FeS cluster assembly protein sufD [Escherichia coli KTE169]
gi|432745665|ref|ZP_19980334.1| FeS cluster assembly protein sufD [Escherichia coli KTE43]
gi|432783563|ref|ZP_20017744.1| FeS cluster assembly protein sufD [Escherichia coli KTE63]
gi|432844498|ref|ZP_20077397.1| FeS cluster assembly protein sufD [Escherichia coli KTE141]
gi|432904853|ref|ZP_20113759.1| FeS cluster assembly protein sufD [Escherichia coli KTE194]
gi|432937869|ref|ZP_20136246.1| FeS cluster assembly protein sufD [Escherichia coli KTE183]
gi|432971844|ref|ZP_20160712.1| FeS cluster assembly protein sufD [Escherichia coli KTE207]
gi|432978286|ref|ZP_20167108.1| FeS cluster assembly protein sufD [Escherichia coli KTE209]
gi|432985373|ref|ZP_20174097.1| FeS cluster assembly protein sufD [Escherichia coli KTE215]
gi|432995345|ref|ZP_20183956.1| FeS cluster assembly protein sufD [Escherichia coli KTE218]
gi|432999921|ref|ZP_20188451.1| FeS cluster assembly protein sufD [Escherichia coli KTE223]
gi|433038609|ref|ZP_20226213.1| FeS cluster assembly protein sufD [Escherichia coli KTE113]
gi|433058069|ref|ZP_20245128.1| FeS cluster assembly protein sufD [Escherichia coli KTE124]
gi|433082553|ref|ZP_20269018.1| FeS cluster assembly protein sufD [Escherichia coli KTE133]
gi|433087216|ref|ZP_20273600.1| FeS cluster assembly protein sufD [Escherichia coli KTE137]
gi|433101144|ref|ZP_20287241.1| FeS cluster assembly protein sufD [Escherichia coli KTE145]
gi|433115534|ref|ZP_20301338.1| FeS cluster assembly protein sufD [Escherichia coli KTE153]
gi|433125171|ref|ZP_20310746.1| FeS cluster assembly protein sufD [Escherichia coli KTE160]
gi|433139234|ref|ZP_20324505.1| FeS cluster assembly protein sufD [Escherichia coli KTE167]
gi|433144218|ref|ZP_20329370.1| FeS cluster assembly protein sufD [Escherichia coli KTE168]
gi|433149182|ref|ZP_20334218.1| FeS cluster assembly protein sufD [Escherichia coli KTE174]
gi|433188419|ref|ZP_20372522.1| FeS cluster assembly protein sufD [Escherichia coli KTE88]
gi|433207779|ref|ZP_20391462.1| FeS cluster assembly protein sufD [Escherichia coli KTE97]
gi|433212487|ref|ZP_20396090.1| FeS cluster assembly protein sufD [Escherichia coli KTE99]
gi|442604343|ref|ZP_21019188.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli Nissle
1917]
gi|26108334|gb|AAN80536.1|AE016761_111 SufD protein [Escherichia coli CFT073]
gi|227837079|gb|EEJ47545.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 83972]
gi|300297365|gb|EFJ53750.1| FeS assembly protein SufD [Escherichia coli MS 185-1]
gi|300406200|gb|EFJ89738.1| FeS assembly protein SufD [Escherichia coli MS 45-1]
gi|305851714|gb|EFM52167.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli NC101]
gi|307553702|gb|ADN46477.1| FeS assembly protein SufD [Escherichia coli ABU 83972]
gi|315290528|gb|EFU49902.1| FeS assembly protein SufD [Escherichia coli MS 153-1]
gi|320195423|gb|EFW70048.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
WV_060327]
gi|355420271|gb|AER84468.1| cysteine desulfurase activator complex subunit [Escherichia coli
str. 'clone D i2']
gi|355425191|gb|AER89387.1| cysteine desulfurase activator complex subunit [Escherichia coli
str. 'clone D i14']
gi|430907090|gb|ELC28589.1| FeS cluster assembly protein sufD [Escherichia coli KTE16]
gi|430908357|gb|ELC29750.1| FeS cluster assembly protein sufD [Escherichia coli KTE15]
gi|430935126|gb|ELC55448.1| FeS cluster assembly protein sufD [Escherichia coli KTE39]
gi|430953382|gb|ELC72280.1| FeS cluster assembly protein sufD [Escherichia coli KTE187]
gi|430964569|gb|ELC82016.1| FeS cluster assembly protein sufD [Escherichia coli KTE188]
gi|430982593|gb|ELC99282.1| FeS cluster assembly protein sufD [Escherichia coli KTE201]
gi|431024245|gb|ELD37410.1| FeS cluster assembly protein sufD [Escherichia coli KTE214]
gi|431039394|gb|ELD50214.1| FeS cluster assembly protein sufD [Escherichia coli KTE220]
gi|431042519|gb|ELD53007.1| FeS cluster assembly protein sufD [Escherichia coli KTE224]
gi|431052889|gb|ELD62525.1| FeS cluster assembly protein sufD [Escherichia coli KTE230]
gi|431100529|gb|ELE05499.1| FeS cluster assembly protein sufD [Escherichia coli KTE53]
gi|431128638|gb|ELE30820.1| FeS cluster assembly protein sufD [Escherichia coli KTE60]
gi|431138606|gb|ELE40418.1| FeS cluster assembly protein sufD [Escherichia coli KTE67]
gi|431148847|gb|ELE50120.1| FeS cluster assembly protein sufD [Escherichia coli KTE72]
gi|431180224|gb|ELE80111.1| FeS cluster assembly protein sufD [Escherichia coli KTE86]
gi|431190988|gb|ELE90373.1| FeS cluster assembly protein sufD [Escherichia coli KTE87]
gi|431191823|gb|ELE91197.1| FeS cluster assembly protein sufD [Escherichia coli KTE93]
gi|431244290|gb|ELF38598.1| FeS cluster assembly protein sufD [Escherichia coli KTE169]
gi|431291802|gb|ELF82298.1| FeS cluster assembly protein sufD [Escherichia coli KTE43]
gi|431329431|gb|ELG16717.1| FeS cluster assembly protein sufD [Escherichia coli KTE63]
gi|431394825|gb|ELG78338.1| FeS cluster assembly protein sufD [Escherichia coli KTE141]
gi|431433153|gb|ELH14825.1| FeS cluster assembly protein sufD [Escherichia coli KTE194]
gi|431463953|gb|ELH44075.1| FeS cluster assembly protein sufD [Escherichia coli KTE183]
gi|431480458|gb|ELH60177.1| FeS cluster assembly protein sufD [Escherichia coli KTE209]
gi|431482545|gb|ELH62247.1| FeS cluster assembly protein sufD [Escherichia coli KTE207]
gi|431500810|gb|ELH79796.1| FeS cluster assembly protein sufD [Escherichia coli KTE215]
gi|431507058|gb|ELH85344.1| FeS cluster assembly protein sufD [Escherichia coli KTE218]
gi|431509938|gb|ELH88185.1| FeS cluster assembly protein sufD [Escherichia coli KTE223]
gi|431552069|gb|ELI26031.1| FeS cluster assembly protein sufD [Escherichia coli KTE113]
gi|431570712|gb|ELI43620.1| FeS cluster assembly protein sufD [Escherichia coli KTE124]
gi|431602880|gb|ELI72307.1| FeS cluster assembly protein sufD [Escherichia coli KTE133]
gi|431606936|gb|ELI76307.1| FeS cluster assembly protein sufD [Escherichia coli KTE137]
gi|431620274|gb|ELI89151.1| FeS cluster assembly protein sufD [Escherichia coli KTE145]
gi|431635060|gb|ELJ03275.1| FeS cluster assembly protein sufD [Escherichia coli KTE153]
gi|431646556|gb|ELJ14048.1| FeS cluster assembly protein sufD [Escherichia coli KTE160]
gi|431661612|gb|ELJ28424.1| FeS cluster assembly protein sufD [Escherichia coli KTE167]
gi|431662764|gb|ELJ29532.1| FeS cluster assembly protein sufD [Escherichia coli KTE168]
gi|431671846|gb|ELJ38119.1| FeS cluster assembly protein sufD [Escherichia coli KTE174]
gi|431706462|gb|ELJ71032.1| FeS cluster assembly protein sufD [Escherichia coli KTE88]
gi|431730791|gb|ELJ94350.1| FeS cluster assembly protein sufD [Escherichia coli KTE97]
gi|431734769|gb|ELJ98145.1| FeS cluster assembly protein sufD [Escherichia coli KTE99]
gi|441714600|emb|CCQ05165.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli Nissle
1917]
Length = 423
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|74311994|ref|YP_310413.1| cysteine desulfurase [Shigella sonnei Ss046]
gi|383178260|ref|YP_005456265.1| cysteine desulfurase activator complex subunit SufD [Shigella
sonnei 53G]
gi|414575836|ref|ZP_11433035.1| feS assembly protein SufD [Shigella sonnei 3233-85]
gi|418264931|ref|ZP_12885158.1| feS assembly protein SufD [Shigella sonnei str. Moseley]
gi|420358367|ref|ZP_14859359.1| feS assembly protein SufD [Shigella sonnei 3226-85]
gi|420363138|ref|ZP_14864040.1| feS assembly protein SufD [Shigella sonnei 4822-66]
gi|73855471|gb|AAZ88178.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|391285183|gb|EIQ43769.1| feS assembly protein SufD [Shigella sonnei 3226-85]
gi|391286547|gb|EIQ45086.1| feS assembly protein SufD [Shigella sonnei 3233-85]
gi|391295255|gb|EIQ53424.1| feS assembly protein SufD [Shigella sonnei 4822-66]
gi|397901537|gb|EJL17881.1| feS assembly protein SufD [Shigella sonnei str. Moseley]
Length = 423
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKMAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|406915041|gb|EKD54168.1| hypothetical protein ACD_60C00119G0014 [uncultured bacterium]
Length = 418
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 173/397 (43%), Gaps = 57/397 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP--ITRPSSSLDVSTDAQFPS 130
L R SQ L WP++K+E F++T+ S P P + S A
Sbjct: 15 LDDFRLKQSQIFLKRGWPTKKEECFKYTEIKNTISENKNPHFTDLPERNYFFSEIAAI-R 73
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLG------------------------------- 159
++ I+G+ N+ LP G+ + +L
Sbjct: 74 MIFINGYFVAHLSNVEKLPGGIAIYTLQKALEKKESIIQSYLTREFDEKRFPFAVLNASV 133
Query: 160 VSDGIMKRVSD-----------FISEFQCGDLFWSIN----GMGAPDLGVIYVP---AEG 201
+ DG+ +S FI G+ ++I+ + PD VI + E
Sbjct: 134 MKDGMFLEISKNTKTSLPIHLVFI---HTGEDHFTIHPRNIVVARPDSKVILIEEHVGEN 190
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
Y+ N+V ++ G+ + + +QN+S A H+ V Q S + ++ G KLS
Sbjct: 191 AKHYFTNTVTDIHAGENASIEYYKIQNESHTATHVANVFVTQHRDSTLKTFFLAKGAKLS 250
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
R ++ ++Q ++ F+ L D Q D H + P G +++ ++ +A
Sbjct: 251 REDLTIKQKAIGAISDSYGFYFLNQDEQHIDHHVHVDHLAPEGKSTMVYRGVLDKK-SRA 309
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+G V V++ A+ A Q LLL A +N KP L+I AD+VKC+HGA + ++
Sbjct: 310 VFNGKVFVDKAAKHIHAHQANHHLLLSKEAEINTKPELEIYADEVKCTHGATVGQIDNDA 369
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
LFY ++RG++ +TA + L +F E+ + P++++
Sbjct: 370 LFYLRSRGMEEKTAFQILTRAFSGEIFSKIQDPTLKH 406
>gi|255532926|ref|YP_003093298.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
gi|255345910|gb|ACU05236.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
Length = 436
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 5/216 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N V+E+V+ K V + +QN NA+ + T + Q S V ++ G + R+N+
Sbjct: 213 FCNEVMELVVEKNAYVEYYKIQNDRANASQVSTTHITQIGRSYVHTVTITLSGNIVRNNM 272
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 323
++ P E L +LL D H+ L+D+ + C Q +K I A AVF+
Sbjct: 273 NLVLDAPGNEAHLYGLYLLKGKTHADNHT--LIDNRQANCFSNQFYKGIAA-DFSTAVFN 329
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V AQ+T+A Q +++LL AT+N KP L+I ADDVKCSHG + L+E LFY
Sbjct: 330 GRIMVQPDAQKTNAYQSNKNILLSDNATINTKPQLEIFADDVKCSHGCTVGQLDEEALFY 389
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+ARGI A L+ ++ +++++ +R V
Sbjct: 390 LRARGIPKAKAEVLLLQAYATDILDQIKSEPLRKYV 425
>gi|238895188|ref|YP_002919923.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|402780358|ref|YP_006635904.1| iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|238547505|dbj|BAH63856.1| Fe-S cluster assembly protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402541264|gb|AFQ65413.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 424
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG++ RH + G ++ L+S + V ++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGQVLRHQTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 308 DK-GRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 367 RIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALKEQVLARI 415
>gi|417286950|ref|ZP_12074237.1| FeS assembly protein SufD [Escherichia coli TW07793]
gi|386249283|gb|EII95454.1| FeS assembly protein SufD [Escherichia coli TW07793]
Length = 423
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|299472231|emb|CBN77201.1| FeS assembly protein SufD [Ectocarpus siliculosus]
Length = 524
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 171/388 (44%), Gaps = 65/388 (16%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
++P+P L +L + L P+RK EP+R+TD + + +++ + +
Sbjct: 129 AVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFTSAAPTTTAAETAAA 188
Query: 126 --------AQFPSLVLIDGFIQNSALNLSNLP--DGVYVGSLLGVSDGIMKRVSDFIS-- 173
+Q +V ++G + ++S L +G+ G + + + + + +S
Sbjct: 189 IKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQAKEMLSYL 248
Query: 174 -----EFQC--GDL-FWSINGMGAPDLGVIYVP--------------AEGND-------- 203
+F+ G L F S+N D GVI V +EG +
Sbjct: 249 PEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFSEGEEGPTVSHPR 308
Query: 204 ----------------------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 241
AN V++G V H Y + S + + +V
Sbjct: 309 LVVKAGADSHVTLTQSYLSRGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSV 368
Query: 242 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 301
Q T S Y + +V +G +R N + L + + + L ++Q QD+HS +
Sbjct: 369 DQTTNSTYSVNQVLSGAFDARANFQIDLLETGSHCNIFTAALTTNNQRQDVHSTIRHKAE 428
Query: 302 RGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 361
C Q + +V+ + VF G + +++ AQ+TDA QL R+LL+ +A V V P+++II
Sbjct: 429 GTTCLQEQRNVVSDT-ADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEII 487
Query: 362 ADDVKCSHGAAISDLEESQLFYFQARGI 389
A+DVKC+HGA I DLE+ +LFY +RGI
Sbjct: 488 ANDVKCTHGATICDLEDEELFYLMSRGI 515
>gi|390954259|ref|YP_006418017.1| Iron-regulated ABC transporter permease protein SufD [Aequorivita
sublithincola DSM 14238]
gi|390420245|gb|AFL81002.1| Iron-regulated ABC transporter permease protein SufD [Aequorivita
sublithincola DSM 14238]
Length = 437
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +QN A+ I T + Q+ + + S GG L R+N++
Sbjct: 211 NSVTEIFAEKRAYVDYYKIQNDEATASLIDNTYISQQRDTVCRVHTFSFGGNLVRNNLNF 270
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
Q G + ++ L +L Q D ++ + P Q +K + A S VF+G +
Sbjct: 271 YQKGENCDSTLKGITILEGKQHVDHNTLVHHISPNCESHQDYKGLYAGS-STGVFNGKIV 329
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V R AQ+ DA Q ++L++ +AT+N KP L+I ADDVKCSHG I +E LFY ++R
Sbjct: 330 VERDAQKIDAYQQNDNILIDDKATINAKPQLEIFADDVKCSHGCTIGQFDEDALFYLRSR 389
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
GI L+ AR L+++F V+E P ++ ++ + +G
Sbjct: 390 GIGLKEARALLMYAFANTVLESVKIPELKKRINKLIATKIG 430
>gi|383190670|ref|YP_005200798.1| FeS assembly protein SufD [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371588928|gb|AEX52658.1| FeS assembly protein SufD [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 433
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVA 314
G L+RHN Q G ++ +++S L V + D +R L+H +GYC QLHK IV
Sbjct: 260 GAGLTRHNTSAQLNGENSNLDINSLVLPVDAEIAD--TRTYLEHNKGYCNSNQLHKVIV- 316
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +A+F+G +KV ++A +TD +LLL V+ KP L+I ADDVKCSHGA +
Sbjct: 317 NDRAKAIFNGMIKVAQHALKTDGKMTNNNLLLGKHTEVDTKPQLEIYADDVKCSHGATVG 376
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ QLFY + RGI + A++ ++F+F AE+ E ++R V++ +
Sbjct: 377 RIDDEQLFYLRTRGISGQDAQQMIIFAFAAELTEAIENETLREVVIARI 425
>gi|429746994|ref|ZP_19280301.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429164464|gb|EKY06597.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 380 str.
F0488]
Length = 439
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 5/225 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V EV + K + + LQN SL A+ I T + QE S + S GG L+R+N++
Sbjct: 215 NAVTEVFVAKEAFLDYYKLQNDSLTASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 274
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGN 325
G E+ L +L Q D ++ L++H P Q +K IV+ VF+G
Sbjct: 275 YHQGEHLESTLKGLSILKGTQHTDHYT--LVNHACPNCESHQDYKSIVSDE-ATNVFNGK 331
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L LFY Q
Sbjct: 332 IMVEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQ 391
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
RGI + A L ++F V+E P++ + + +G T
Sbjct: 392 TRGIGKKEASALLTYAFANTVLESVSIPALSEYINRIIAEKLGVT 436
>gi|110641802|ref|YP_669532.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 536]
gi|300987769|ref|ZP_07178347.1| FeS assembly protein SufD [Escherichia coli MS 200-1]
gi|422377264|ref|ZP_16457507.1| FeS assembly protein SufD [Escherichia coli MS 60-1]
gi|432470983|ref|ZP_19713030.1| FeS cluster assembly protein sufD [Escherichia coli KTE206]
gi|432713394|ref|ZP_19948435.1| FeS cluster assembly protein sufD [Escherichia coli KTE8]
gi|433077764|ref|ZP_20264315.1| FeS cluster assembly protein sufD [Escherichia coli KTE131]
gi|110343394|gb|ABG69631.1| SufD protein [Escherichia coli 536]
gi|300306057|gb|EFJ60577.1| FeS assembly protein SufD [Escherichia coli MS 200-1]
gi|324011454|gb|EGB80673.1| FeS assembly protein SufD [Escherichia coli MS 60-1]
gi|430998201|gb|ELD14442.1| FeS cluster assembly protein sufD [Escherichia coli KTE206]
gi|431257197|gb|ELF50121.1| FeS cluster assembly protein sufD [Escherichia coli KTE8]
gi|431597435|gb|ELI67341.1| FeS cluster assembly protein sufD [Escherichia coli KTE131]
Length = 423
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDEGLKQQVLARI 414
>gi|386619250|ref|YP_006138830.1| Cysteine desulfurase activator complex subunit [Escherichia coli
NA114]
gi|432397482|ref|ZP_19640263.1| FeS cluster assembly protein sufD [Escherichia coli KTE25]
gi|432421946|ref|ZP_19664494.1| FeS cluster assembly protein sufD [Escherichia coli KTE178]
gi|432558768|ref|ZP_19795446.1| FeS cluster assembly protein sufD [Escherichia coli KTE49]
gi|432710594|ref|ZP_19945656.1| FeS cluster assembly protein sufD [Escherichia coli KTE6]
gi|432723106|ref|ZP_19958026.1| FeS cluster assembly protein sufD [Escherichia coli KTE17]
gi|432727693|ref|ZP_19962572.1| FeS cluster assembly protein sufD [Escherichia coli KTE18]
gi|432741384|ref|ZP_19976103.1| FeS cluster assembly protein sufD [Escherichia coli KTE23]
gi|432894505|ref|ZP_20106326.1| FeS cluster assembly protein sufD [Escherichia coli KTE165]
gi|432990693|ref|ZP_20179357.1| FeS cluster assembly protein sufD [Escherichia coli KTE217]
gi|433110904|ref|ZP_20296769.1| FeS cluster assembly protein sufD [Escherichia coli KTE150]
gi|333969751|gb|AEG36556.1| Cysteine desulfurase activator complex subunit [Escherichia coli
NA114]
gi|430915586|gb|ELC36664.1| FeS cluster assembly protein sufD [Escherichia coli KTE25]
gi|430944705|gb|ELC64794.1| FeS cluster assembly protein sufD [Escherichia coli KTE178]
gi|431091819|gb|ELD97527.1| FeS cluster assembly protein sufD [Escherichia coli KTE49]
gi|431249386|gb|ELF43541.1| FeS cluster assembly protein sufD [Escherichia coli KTE6]
gi|431265660|gb|ELF57222.1| FeS cluster assembly protein sufD [Escherichia coli KTE17]
gi|431273382|gb|ELF64456.1| FeS cluster assembly protein sufD [Escherichia coli KTE18]
gi|431283075|gb|ELF73934.1| FeS cluster assembly protein sufD [Escherichia coli KTE23]
gi|431422418|gb|ELH04610.1| FeS cluster assembly protein sufD [Escherichia coli KTE165]
gi|431494775|gb|ELH74361.1| FeS cluster assembly protein sufD [Escherichia coli KTE217]
gi|431628208|gb|ELI96584.1| FeS cluster assembly protein sufD [Escherichia coli KTE150]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDEGLKQQVMARI 414
>gi|417138476|ref|ZP_11982209.1| FeS assembly protein SufD [Escherichia coli 97.0259]
gi|417308124|ref|ZP_12094979.1| FeS cluster assembly protein sufD [Escherichia coli PCN033]
gi|338770330|gb|EGP25095.1| FeS cluster assembly protein sufD [Escherichia coli PCN033]
gi|386158461|gb|EIH14798.1| FeS assembly protein SufD [Escherichia coli 97.0259]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV-KNLMG 428
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ + + L+G
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQRLLG 420
>gi|432406697|ref|ZP_19649406.1| FeS cluster assembly protein sufD [Escherichia coli KTE28]
gi|430929456|gb|ELC49965.1| FeS cluster assembly protein sufD [Escherichia coli KTE28]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDEGLKQQVMARI 414
>gi|419925143|ref|ZP_14442991.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 541-15]
gi|420352606|ref|ZP_14853745.1| feS assembly protein SufD [Shigella boydii 4444-74]
gi|432533929|ref|ZP_19770908.1| FeS cluster assembly protein sufD [Escherichia coli KTE234]
gi|388387382|gb|EIL49000.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 541-15]
gi|391281855|gb|EIQ40493.1| feS assembly protein SufD [Shigella boydii 4444-74]
gi|431061415|gb|ELD70728.1| FeS cluster assembly protein sufD [Escherichia coli KTE234]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|417232090|ref|ZP_12033488.1| FeS assembly protein SufD [Escherichia coli 5.0959]
gi|386205089|gb|EII09600.1| FeS assembly protein SufD [Escherichia coli 5.0959]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|417148469|ref|ZP_11988716.1| FeS assembly protein SufD [Escherichia coli 1.2264]
gi|417154884|ref|ZP_11993013.1| FeS assembly protein SufD [Escherichia coli 96.0497]
gi|417581149|ref|ZP_12231954.1| feS assembly protein SufD [Escherichia coli STEC_B2F1]
gi|432750137|ref|ZP_19984744.1| FeS cluster assembly protein sufD [Escherichia coli KTE29]
gi|345339772|gb|EGW72197.1| feS assembly protein SufD [Escherichia coli STEC_B2F1]
gi|386162127|gb|EIH23929.1| FeS assembly protein SufD [Escherichia coli 1.2264]
gi|386167973|gb|EIH34489.1| FeS assembly protein SufD [Escherichia coli 96.0497]
gi|431297054|gb|ELF86712.1| FeS cluster assembly protein sufD [Escherichia coli KTE29]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432553647|ref|ZP_19790374.1| FeS cluster assembly protein sufD [Escherichia coli KTE47]
gi|431084947|gb|ELD91070.1| FeS cluster assembly protein sufD [Escherichia coli KTE47]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|419913891|ref|ZP_14432300.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KD1]
gi|388387919|gb|EIL49517.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KD1]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDEGLKQQVLARI 414
>gi|417121455|ref|ZP_11970883.1| FeS assembly protein SufD [Escherichia coli 97.0246]
gi|386148307|gb|EIG94744.1| FeS assembly protein SufD [Escherichia coli 97.0246]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|418043876|ref|ZP_12682028.1| FeS assembly protein SufD [Escherichia coli W26]
gi|383473293|gb|EID65320.1| FeS assembly protein SufD [Escherichia coli W26]
Length = 407
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 233 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 290
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 291 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 349
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 350 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 398
>gi|222156432|ref|YP_002556571.1| Protein sufD [Escherichia coli LF82]
gi|387617020|ref|YP_006120042.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O83:H1 str. NRG 857C]
gi|222033437|emb|CAP76178.1| Protein sufD [Escherichia coli LF82]
gi|312946281|gb|ADR27108.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O83:H1 str. NRG 857C]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|82543949|ref|YP_407896.1| cysteine desulfurase activator complex subunit SufD [Shigella
boydii Sb227]
gi|81245360|gb|ABB66068.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|386614231|ref|YP_006133897.1| feS assembly protein SufD [Escherichia coli UMNK88]
gi|332343400|gb|AEE56734.1| feS assembly protein SufD [Escherichia coli UMNK88]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|194438568|ref|ZP_03070657.1| FeS assembly protein SufD [Escherichia coli 101-1]
gi|251785135|ref|YP_002999439.1| SufD component of SufBCD Fe-S cluster scaffold complex, subunit of
SufBCD Fe-S cluster scaffold complex [Escherichia coli
BL21(DE3)]
gi|253773362|ref|YP_003036193.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254161742|ref|YP_003044850.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli B str. REL606]
gi|254288531|ref|YP_003054279.1| component of SufBCD complex [Escherichia coli BL21(DE3)]
gi|297517141|ref|ZP_06935527.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli OP50]
gi|300930849|ref|ZP_07146219.1| FeS assembly protein SufD [Escherichia coli MS 187-1]
gi|422786265|ref|ZP_16839004.1| FeS assembly protein SufD [Escherichia coli H489]
gi|422789633|ref|ZP_16842338.1| FeS assembly protein SufD [Escherichia coli TA007]
gi|442598932|ref|ZP_21016674.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|194422578|gb|EDX38576.1| FeS assembly protein SufD [Escherichia coli 101-1]
gi|242377408|emb|CAQ32157.1| SufD component of SufBCD Fe-S cluster scaffold complex, subunit of
SufBCD Fe-S cluster scaffold complex [Escherichia coli
BL21(DE3)]
gi|253324406|gb|ACT29008.1| FeS assembly protein SufD [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253973643|gb|ACT39314.1| component of SufBCD complex [Escherichia coli B str. REL606]
gi|253977838|gb|ACT43508.1| component of SufBCD complex [Escherichia coli BL21(DE3)]
gi|300461324|gb|EFK24817.1| FeS assembly protein SufD [Escherichia coli MS 187-1]
gi|323962172|gb|EGB57767.1| FeS assembly protein SufD [Escherichia coli H489]
gi|323973940|gb|EGB69112.1| FeS assembly protein SufD [Escherichia coli TA007]
gi|441652353|emb|CCQ02171.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|395802762|ref|ZP_10482014.1| FeS assembly protein SufD [Flavobacterium sp. F52]
gi|395435203|gb|EJG01145.1| FeS assembly protein SufD [Flavobacterium sp. F52]
Length = 438
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 120/223 (53%), Gaps = 5/223 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +QN + A I T V Q+ S + S GG L+R+N++
Sbjct: 212 NSVTEIFAQKRAIVDYYKIQNDNNEANLIDNTYVSQQQESHASVHTFSFGGNLTRNNLNF 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGN 325
G + L+ +L Q D ++ L++H C Q +K I + VF+G
Sbjct: 272 YHFGERLTSTLNGISILNDKQHVDHYT--LVNHATPNCESFQDYKGIFSDR-STGVFNGK 328
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V + AQ+T+A Q + ++LL +AT+N KP L+I ADDVKCSHG + L+E+ +FY Q
Sbjct: 329 VLVEKEAQKTNAFQKSNNILLSDKATINAKPQLEIFADDVKCSHGCTVGQLDETAMFYMQ 388
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+RGI + A+ L+++F VIE P ++ ++ + +G
Sbjct: 389 SRGIPKKEAKALLMYAFSNAVIESIKIPELKQRITKIIAMKLG 431
>gi|393779806|ref|ZP_10368041.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|392609763|gb|EIW92566.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 412 str.
F0487]
Length = 433
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 113/223 (50%), Gaps = 1/223 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N V E + K + + LQN SL A+ I T + QE S + S GG L+R+N++
Sbjct: 209 NVVTEAFVAKDAFLDYYKLQNDSLTASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G E+ L +L Q D ++ + +P Q +K IV+ VF+G +
Sbjct: 269 YHQGEHLESTLKGLSILQGTQHTDHYTLVNHAYPNCESHQDYKSIVSDE-ATNVFNGKIM 327
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L LFY Q R
Sbjct: 328 VEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTR 387
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GI + A L ++F V+E P++ + + + +G T
Sbjct: 388 GIGKKEASALLTYAFANTVLESVSIPALSEYINAIIAEKLGVT 430
>gi|157154860|ref|YP_001462975.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli E24377A]
gi|157076890|gb|ABV16598.1| FeS assembly protein SufD [Escherichia coli E24377A]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|419391593|ref|ZP_13932408.1| feS assembly protein SufD [Escherichia coli DEC15A]
gi|419396590|ref|ZP_13937366.1| feS assembly protein SufD [Escherichia coli DEC15B]
gi|419401998|ref|ZP_13942723.1| feS assembly protein SufD [Escherichia coli DEC15C]
gi|419407141|ref|ZP_13947832.1| feS assembly protein SufD [Escherichia coli DEC15D]
gi|419412675|ref|ZP_13953331.1| feS assembly protein SufD [Escherichia coli DEC15E]
gi|378238317|gb|EHX98318.1| feS assembly protein SufD [Escherichia coli DEC15A]
gi|378246746|gb|EHY06666.1| feS assembly protein SufD [Escherichia coli DEC15B]
gi|378247857|gb|EHY07772.1| feS assembly protein SufD [Escherichia coli DEC15C]
gi|378255391|gb|EHY15249.1| feS assembly protein SufD [Escherichia coli DEC15D]
gi|378259540|gb|EHY19352.1| feS assembly protein SufD [Escherichia coli DEC15E]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|417755680|ref|ZP_12403764.1| feS assembly protein SufD [Escherichia coli DEC2B]
gi|419002076|ref|ZP_13549613.1| feS assembly protein SufD [Escherichia coli DEC1B]
gi|419007591|ref|ZP_13555034.1| feS assembly protein SufD [Escherichia coli DEC1C]
gi|419013516|ref|ZP_13560871.1| feS assembly protein SufD [Escherichia coli DEC1D]
gi|419018276|ref|ZP_13565590.1| feS assembly protein SufD [Escherichia coli DEC1E]
gi|419023979|ref|ZP_13571210.1| feS assembly protein SufD [Escherichia coli DEC2A]
gi|419028878|ref|ZP_13576052.1| feS assembly protein SufD [Escherichia coli DEC2C]
gi|419034455|ref|ZP_13581546.1| feS assembly protein SufD [Escherichia coli DEC2D]
gi|377847408|gb|EHU12409.1| feS assembly protein SufD [Escherichia coli DEC1C]
gi|377850007|gb|EHU14975.1| feS assembly protein SufD [Escherichia coli DEC1B]
gi|377858500|gb|EHU23339.1| feS assembly protein SufD [Escherichia coli DEC1D]
gi|377863218|gb|EHU28024.1| feS assembly protein SufD [Escherichia coli DEC1E]
gi|377865460|gb|EHU30251.1| feS assembly protein SufD [Escherichia coli DEC2A]
gi|377875931|gb|EHU40539.1| feS assembly protein SufD [Escherichia coli DEC2B]
gi|377881085|gb|EHU45649.1| feS assembly protein SufD [Escherichia coli DEC2C]
gi|377881525|gb|EHU46082.1| feS assembly protein SufD [Escherichia coli DEC2D]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDNEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|422368546|ref|ZP_16448958.1| FeS assembly protein SufD [Escherichia coli MS 16-3]
gi|432898598|ref|ZP_20109290.1| FeS cluster assembly protein sufD [Escherichia coli KTE192]
gi|433028552|ref|ZP_20216414.1| FeS cluster assembly protein sufD [Escherichia coli KTE109]
gi|315299723|gb|EFU58963.1| FeS assembly protein SufD [Escherichia coli MS 16-3]
gi|431426250|gb|ELH08294.1| FeS cluster assembly protein sufD [Escherichia coli KTE192]
gi|431543661|gb|ELI18627.1| FeS cluster assembly protein sufD [Escherichia coli KTE109]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDEGLKQQVLARI 414
>gi|191167839|ref|ZP_03029644.1| FeS assembly protein SufD [Escherichia coli B7A]
gi|193068886|ref|ZP_03049845.1| FeS assembly protein SufD [Escherichia coli E110019]
gi|209918995|ref|YP_002293079.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SE11]
gi|218554247|ref|YP_002387160.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli IAI1]
gi|218695242|ref|YP_002402909.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 55989]
gi|260855505|ref|YP_003229396.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. 11368]
gi|260868172|ref|YP_003234574.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300820072|ref|ZP_07100248.1| FeS assembly protein SufD [Escherichia coli MS 107-1]
gi|300821446|ref|ZP_07101593.1| FeS assembly protein SufD [Escherichia coli MS 119-7]
gi|300924716|ref|ZP_07140662.1| FeS assembly protein SufD [Escherichia coli MS 182-1]
gi|307310748|ref|ZP_07590394.1| FeS assembly protein SufD [Escherichia coli W]
gi|331668365|ref|ZP_08369213.1| FeS assembly protein SufD [Escherichia coli TA271]
gi|331677552|ref|ZP_08378227.1| FeS assembly protein SufD [Escherichia coli H591]
gi|332279170|ref|ZP_08391583.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
gi|378712881|ref|YP_005277774.1| FeS assembly protein SufD [Escherichia coli KO11FL]
gi|386609069|ref|YP_006124555.1| component of SufBCD complex [Escherichia coli W]
gi|386709537|ref|YP_006173258.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli W]
gi|407469430|ref|YP_006784128.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|407481908|ref|YP_006779057.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2011C-3493]
gi|410482458|ref|YP_006770004.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|415791804|ref|ZP_11495529.1| feS assembly protein SufD [Escherichia coli EPECa14]
gi|415817468|ref|ZP_11507599.1| feS assembly protein SufD [Escherichia coli OK1180]
gi|415826484|ref|ZP_11513587.1| feS assembly protein SufD [Escherichia coli OK1357]
gi|415877924|ref|ZP_11543917.1| FeS assembly protein SufD [Escherichia coli MS 79-10]
gi|417132184|ref|ZP_11976969.1| FeS assembly protein SufD [Escherichia coli 5.0588]
gi|417167926|ref|ZP_12000548.1| FeS assembly protein SufD [Escherichia coli 99.0741]
gi|417195513|ref|ZP_12015927.1| FeS assembly protein SufD [Escherichia coli 4.0522]
gi|417212981|ref|ZP_12022377.1| FeS assembly protein SufD [Escherichia coli JB1-95]
gi|417221796|ref|ZP_12025236.1| FeS assembly protein SufD [Escherichia coli 96.154]
gi|417240894|ref|ZP_12037061.1| FeS assembly protein SufD [Escherichia coli 9.0111]
gi|417265809|ref|ZP_12053178.1| FeS assembly protein SufD [Escherichia coli 3.3884]
gi|417298691|ref|ZP_12085929.1| FeS assembly protein SufD [Escherichia coli 900105 (10e)]
gi|417591765|ref|ZP_12242464.1| feS assembly protein SufD [Escherichia coli 2534-86]
gi|417596805|ref|ZP_12247454.1| feS assembly protein SufD [Escherichia coli 3030-1]
gi|417602262|ref|ZP_12252832.1| feS assembly protein SufD [Escherichia coli STEC_94C]
gi|417608224|ref|ZP_12258731.1| feS assembly protein SufD [Escherichia coli STEC_DG131-3]
gi|417639183|ref|ZP_12289337.1| feS assembly protein SufD [Escherichia coli TX1999]
gi|417667058|ref|ZP_12316606.1| feS assembly protein SufD [Escherichia coli STEC_O31]
gi|417805194|ref|ZP_12452150.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. LB226692]
gi|417832916|ref|ZP_12479364.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 01-09591]
gi|417865501|ref|ZP_12510545.1| ynhC [Escherichia coli O104:H4 str. C227-11]
gi|418941229|ref|ZP_13494564.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H43 str. T22]
gi|419170227|ref|ZP_13714118.1| feS assembly protein SufD [Escherichia coli DEC7A]
gi|419180880|ref|ZP_13724497.1| feS assembly protein SufD [Escherichia coli DEC7C]
gi|419186313|ref|ZP_13729830.1| feS assembly protein SufD [Escherichia coli DEC7D]
gi|419191600|ref|ZP_13735060.1| feS assembly protein SufD [Escherichia coli DEC7E]
gi|419197012|ref|ZP_13740405.1| feS assembly protein SufD [Escherichia coli DEC8A]
gi|419203260|ref|ZP_13746461.1| feS assembly protein SufD [Escherichia coli DEC8B]
gi|419209535|ref|ZP_13752625.1| feS assembly protein SufD [Escherichia coli DEC8C]
gi|419215569|ref|ZP_13758578.1| feS assembly protein SufD [Escherichia coli DEC8D]
gi|419226707|ref|ZP_13769575.1| feS assembly protein SufD [Escherichia coli DEC9A]
gi|419232499|ref|ZP_13775280.1| feS assembly protein SufD [Escherichia coli DEC9B]
gi|419237826|ref|ZP_13780553.1| feS assembly protein SufD [Escherichia coli DEC9C]
gi|419243265|ref|ZP_13785906.1| feS assembly protein SufD [Escherichia coli DEC9D]
gi|419249078|ref|ZP_13791667.1| feS assembly protein SufD [Escherichia coli DEC9E]
gi|419254885|ref|ZP_13797408.1| feS assembly protein SufD [Escherichia coli DEC10A]
gi|419261092|ref|ZP_13803520.1| feS assembly protein SufD [Escherichia coli DEC10B]
gi|419267085|ref|ZP_13809446.1| feS assembly protein SufD [Escherichia coli DEC10C]
gi|419272597|ref|ZP_13814899.1| feS assembly protein SufD [Escherichia coli DEC10D]
gi|419283953|ref|ZP_13826144.1| feS assembly protein SufD [Escherichia coli DEC10F]
gi|419345233|ref|ZP_13886613.1| feS assembly protein SufD [Escherichia coli DEC13A]
gi|419349652|ref|ZP_13891003.1| feS assembly protein SufD [Escherichia coli DEC13B]
gi|419354991|ref|ZP_13896259.1| feS assembly protein SufD [Escherichia coli DEC13C]
gi|419360131|ref|ZP_13901352.1| feS assembly protein SufD [Escherichia coli DEC13D]
gi|419365212|ref|ZP_13906380.1| feS assembly protein SufD [Escherichia coli DEC13E]
gi|419370072|ref|ZP_13911194.1| feS assembly protein SufD [Escherichia coli DEC14A]
gi|419380785|ref|ZP_13921746.1| feS assembly protein SufD [Escherichia coli DEC14C]
gi|419386138|ref|ZP_13927020.1| feS assembly protein SufD [Escherichia coli DEC14D]
gi|419804383|ref|ZP_14329541.1| FeS assembly protein SufD [Escherichia coli AI27]
gi|419864486|ref|ZP_14386936.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O103:H25 str. CVM9340]
gi|419874893|ref|ZP_14396785.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9534]
gi|419882355|ref|ZP_14403591.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9545]
gi|419888242|ref|ZP_14408771.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9570]
gi|419896011|ref|ZP_14415773.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9574]
gi|419901820|ref|ZP_14421134.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM9942]
gi|419908234|ref|ZP_14426979.1| FeS assembly protein SufD [Escherichia coli O26:H11 str. CVM10026]
gi|419930373|ref|ZP_14447978.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 541-1]
gi|419949959|ref|ZP_14466185.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli CUMT8]
gi|420091818|ref|ZP_14603554.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9602]
gi|420094778|ref|ZP_14606346.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9634]
gi|420100618|ref|ZP_14611776.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9455]
gi|420111402|ref|ZP_14621235.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9553]
gi|420114661|ref|ZP_14624293.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10021]
gi|420118953|ref|ZP_14628262.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10030]
gi|420129892|ref|ZP_14638407.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10224]
gi|420136240|ref|ZP_14644301.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM9952]
gi|420385655|ref|ZP_14885016.1| feS assembly protein SufD [Escherichia coli EPECa12]
gi|422355527|ref|ZP_16436241.1| FeS assembly protein SufD [Escherichia coli MS 117-3]
gi|422760931|ref|ZP_16814690.1| FeS assembly protein SufD [Escherichia coli E1167]
gi|422774425|ref|ZP_16828081.1| FeS assembly protein SufD [Escherichia coli H120]
gi|422956961|ref|ZP_16969435.1| FeS cluster assembly protein sufD [Escherichia coli H494]
gi|422987681|ref|ZP_16978457.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
C227-11]
gi|422994564|ref|ZP_16985328.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
C236-11]
gi|422999750|ref|ZP_16990504.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
09-7901]
gi|423003363|ref|ZP_16994109.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
04-8351]
gi|423009877|ref|ZP_17000615.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-3677]
gi|423019106|ref|ZP_17009815.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4404]
gi|423024272|ref|ZP_17014969.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4522]
gi|423030089|ref|ZP_17020777.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4623]
gi|423037921|ref|ZP_17028595.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423043042|ref|ZP_17033709.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423044781|ref|ZP_17035442.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423053314|ref|ZP_17042122.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423060280|ref|ZP_17049076.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423705670|ref|ZP_17680053.1| FeS cluster assembly protein sufD [Escherichia coli B799]
gi|424752181|ref|ZP_18180187.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CFSAN001629]
gi|424764119|ref|ZP_18191578.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CFSAN001630]
gi|424771312|ref|ZP_18198462.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CFSAN001632]
gi|425379417|ref|ZP_18763532.1| feS assembly protein SufD [Escherichia coli EC1865]
gi|425422377|ref|ZP_18803558.1| feS assembly protein SufD [Escherichia coli 0.1288]
gi|427804816|ref|ZP_18971883.1| hypothetical protein BN16_22261 [Escherichia coli chi7122]
gi|427809374|ref|ZP_18976439.1| hypothetical protein BN17_19391 [Escherichia coli]
gi|429719136|ref|ZP_19254076.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429724481|ref|ZP_19259349.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429776179|ref|ZP_19308164.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02030]
gi|429780632|ref|ZP_19312579.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783219|ref|ZP_19315135.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02092]
gi|429790397|ref|ZP_19322266.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02093]
gi|429794359|ref|ZP_19326200.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02281]
gi|429798012|ref|ZP_19329816.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02318]
gi|429806432|ref|ZP_19338171.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02913]
gi|429810877|ref|ZP_19342578.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-03439]
gi|429816317|ref|ZP_19347975.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-04080]
gi|429821004|ref|ZP_19352618.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-03943]
gi|429912679|ref|ZP_19378635.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429913549|ref|ZP_19379497.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429918591|ref|ZP_19384524.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429924397|ref|ZP_19390311.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429928336|ref|ZP_19394238.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429934889|ref|ZP_19400776.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429940559|ref|ZP_19406433.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429948192|ref|ZP_19414047.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429950837|ref|ZP_19416685.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429954135|ref|ZP_19419971.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432376833|ref|ZP_19619830.1| FeS cluster assembly protein sufD [Escherichia coli KTE12]
gi|432580424|ref|ZP_19816850.1| FeS cluster assembly protein sufD [Escherichia coli KTE56]
gi|432765034|ref|ZP_19999473.1| FeS cluster assembly protein sufD [Escherichia coli KTE48]
gi|432805735|ref|ZP_20039674.1| FeS cluster assembly protein sufD [Escherichia coli KTE91]
gi|432809326|ref|ZP_20043219.1| FeS cluster assembly protein sufD [Escherichia coli KTE101]
gi|432831659|ref|ZP_20065233.1| FeS cluster assembly protein sufD [Escherichia coli KTE135]
gi|432834677|ref|ZP_20068216.1| FeS cluster assembly protein sufD [Escherichia coli KTE136]
gi|432934301|ref|ZP_20133839.1| FeS cluster assembly protein sufD [Escherichia coli KTE184]
gi|432967803|ref|ZP_20156718.1| FeS cluster assembly protein sufD [Escherichia coli KTE203]
gi|433092088|ref|ZP_20278363.1| FeS cluster assembly protein sufD [Escherichia coli KTE138]
gi|433130209|ref|ZP_20315654.1| FeS cluster assembly protein sufD [Escherichia coli KTE163]
gi|433134910|ref|ZP_20320264.1| FeS cluster assembly protein sufD [Escherichia coli KTE166]
gi|433193656|ref|ZP_20377656.1| FeS cluster assembly protein sufD [Escherichia coli KTE90]
gi|450215047|ref|ZP_21895383.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O08]
gi|190902098|gb|EDV61842.1| FeS assembly protein SufD [Escherichia coli B7A]
gi|192957681|gb|EDV88125.1| FeS assembly protein SufD [Escherichia coli E110019]
gi|209912254|dbj|BAG77328.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351974|emb|CAU97706.1| component of SufBCD complex [Escherichia coli 55989]
gi|218361015|emb|CAQ98590.1| component of SufBCD complex [Escherichia coli IAI1]
gi|257754154|dbj|BAI25656.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|257764528|dbj|BAI36023.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300419094|gb|EFK02405.1| FeS assembly protein SufD [Escherichia coli MS 182-1]
gi|300525949|gb|EFK47018.1| FeS assembly protein SufD [Escherichia coli MS 119-7]
gi|300527377|gb|EFK48439.1| FeS assembly protein SufD [Escherichia coli MS 107-1]
gi|306908926|gb|EFN39422.1| FeS assembly protein SufD [Escherichia coli W]
gi|315060986|gb|ADT75313.1| component of SufBCD complex [Escherichia coli W]
gi|323152812|gb|EFZ39082.1| feS assembly protein SufD [Escherichia coli EPECa14]
gi|323180997|gb|EFZ66535.1| feS assembly protein SufD [Escherichia coli OK1180]
gi|323186046|gb|EFZ71402.1| feS assembly protein SufD [Escherichia coli OK1357]
gi|323378442|gb|ADX50710.1| FeS assembly protein SufD [Escherichia coli KO11FL]
gi|323948024|gb|EGB44016.1| FeS assembly protein SufD [Escherichia coli H120]
gi|324016511|gb|EGB85730.1| FeS assembly protein SufD [Escherichia coli MS 117-3]
gi|324119165|gb|EGC13053.1| FeS assembly protein SufD [Escherichia coli E1167]
gi|331063559|gb|EGI35470.1| FeS assembly protein SufD [Escherichia coli TA271]
gi|331074012|gb|EGI45332.1| FeS assembly protein SufD [Escherichia coli H591]
gi|332101522|gb|EGJ04868.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
gi|340733798|gb|EGR62928.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 01-09591]
gi|340740097|gb|EGR74322.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. LB226692]
gi|341918790|gb|EGT68403.1| ynhC [Escherichia coli O104:H4 str. C227-11]
gi|342927683|gb|EGU96405.1| FeS assembly protein SufD [Escherichia coli MS 79-10]
gi|345340425|gb|EGW72843.1| feS assembly protein SufD [Escherichia coli 2534-86]
gi|345349928|gb|EGW82203.1| feS assembly protein SufD [Escherichia coli STEC_94C]
gi|345355718|gb|EGW87927.1| feS assembly protein SufD [Escherichia coli 3030-1]
gi|345359765|gb|EGW91940.1| feS assembly protein SufD [Escherichia coli STEC_DG131-3]
gi|345394035|gb|EGX23800.1| feS assembly protein SufD [Escherichia coli TX1999]
gi|354865639|gb|EHF26068.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
C236-11]
gi|354869808|gb|EHF30216.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
C227-11]
gi|354870896|gb|EHF31296.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
04-8351]
gi|354874313|gb|EHF34684.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
09-7901]
gi|354881245|gb|EHF41575.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-3677]
gi|354891548|gb|EHF51776.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4404]
gi|354894433|gb|EHF54627.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4522]
gi|354896715|gb|EHF56884.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354899680|gb|EHF59824.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4623]
gi|354901839|gb|EHF61963.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354914504|gb|EHF74488.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354918996|gb|EHF78951.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354919857|gb|EHF79796.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C4]
gi|371599262|gb|EHN88052.1| FeS cluster assembly protein sufD [Escherichia coli H494]
gi|375323453|gb|EHS69163.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H43 str. T22]
gi|378016864|gb|EHV79741.1| feS assembly protein SufD [Escherichia coli DEC7A]
gi|378024248|gb|EHV86902.1| feS assembly protein SufD [Escherichia coli DEC7C]
gi|378030017|gb|EHV92621.1| feS assembly protein SufD [Escherichia coli DEC7D]
gi|378039543|gb|EHW02031.1| feS assembly protein SufD [Escherichia coli DEC7E]
gi|378048324|gb|EHW10678.1| feS assembly protein SufD [Escherichia coli DEC8A]
gi|378052221|gb|EHW14531.1| feS assembly protein SufD [Escherichia coli DEC8B]
gi|378055400|gb|EHW17662.1| feS assembly protein SufD [Escherichia coli DEC8C]
gi|378064027|gb|EHW26189.1| feS assembly protein SufD [Escherichia coli DEC8D]
gi|378076702|gb|EHW38704.1| feS assembly protein SufD [Escherichia coli DEC9A]
gi|378078992|gb|EHW40971.1| feS assembly protein SufD [Escherichia coli DEC9B]
gi|378085239|gb|EHW47132.1| feS assembly protein SufD [Escherichia coli DEC9C]
gi|378091873|gb|EHW53700.1| feS assembly protein SufD [Escherichia coli DEC9D]
gi|378096451|gb|EHW58221.1| feS assembly protein SufD [Escherichia coli DEC9E]
gi|378101927|gb|EHW63611.1| feS assembly protein SufD [Escherichia coli DEC10A]
gi|378108423|gb|EHW70036.1| feS assembly protein SufD [Escherichia coli DEC10B]
gi|378112957|gb|EHW74530.1| feS assembly protein SufD [Escherichia coli DEC10C]
gi|378117973|gb|EHW79482.1| feS assembly protein SufD [Escherichia coli DEC10D]
gi|378135495|gb|EHW96806.1| feS assembly protein SufD [Escherichia coli DEC10F]
gi|378188268|gb|EHX48874.1| feS assembly protein SufD [Escherichia coli DEC13A]
gi|378203030|gb|EHX63455.1| feS assembly protein SufD [Escherichia coli DEC13B]
gi|378203430|gb|EHX63853.1| feS assembly protein SufD [Escherichia coli DEC13C]
gi|378205061|gb|EHX65476.1| feS assembly protein SufD [Escherichia coli DEC13D]
gi|378215135|gb|EHX75435.1| feS assembly protein SufD [Escherichia coli DEC13E]
gi|378219532|gb|EHX79800.1| feS assembly protein SufD [Escherichia coli DEC14A]
gi|378229661|gb|EHX89797.1| feS assembly protein SufD [Escherichia coli DEC14C]
gi|378232613|gb|EHX92711.1| feS assembly protein SufD [Escherichia coli DEC14D]
gi|383405229|gb|AFH11472.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli W]
gi|384472568|gb|EIE56621.1| FeS assembly protein SufD [Escherichia coli AI27]
gi|385713062|gb|EIG49998.1| FeS cluster assembly protein sufD [Escherichia coli B799]
gi|386150038|gb|EIH01327.1| FeS assembly protein SufD [Escherichia coli 5.0588]
gi|386170952|gb|EIH43000.1| FeS assembly protein SufD [Escherichia coli 99.0741]
gi|386189555|gb|EIH78321.1| FeS assembly protein SufD [Escherichia coli 4.0522]
gi|386194657|gb|EIH88904.1| FeS assembly protein SufD [Escherichia coli JB1-95]
gi|386201598|gb|EII00589.1| FeS assembly protein SufD [Escherichia coli 96.154]
gi|386212538|gb|EII22983.1| FeS assembly protein SufD [Escherichia coli 9.0111]
gi|386231802|gb|EII59149.1| FeS assembly protein SufD [Escherichia coli 3.3884]
gi|386257730|gb|EIJ13213.1| FeS assembly protein SufD [Escherichia coli 900105 (10e)]
gi|388340139|gb|EIL06420.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O103:H25 str. CVM9340]
gi|388349916|gb|EIL15347.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9534]
gi|388359374|gb|EIL23694.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9574]
gi|388360950|gb|EIL25100.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9570]
gi|388362012|gb|EIL26068.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9545]
gi|388375351|gb|EIL38376.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM9942]
gi|388375539|gb|EIL38546.1| FeS assembly protein SufD [Escherichia coli O26:H11 str. CVM10026]
gi|388400356|gb|EIL61103.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 541-1]
gi|388417928|gb|EIL77751.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli CUMT8]
gi|391306532|gb|EIQ64288.1| feS assembly protein SufD [Escherichia coli EPECa12]
gi|394381107|gb|EJE58804.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10224]
gi|394382133|gb|EJE59785.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9602]
gi|394395203|gb|EJE71676.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9634]
gi|394398384|gb|EJE74564.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9553]
gi|394408525|gb|EJE83167.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10021]
gi|394418759|gb|EJE92417.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM9952]
gi|394419637|gb|EJE93222.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9455]
gi|394432326|gb|EJF04428.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10030]
gi|397785305|gb|EJK96155.1| feS assembly protein SufD [Escherichia coli STEC_O31]
gi|406777620|gb|AFS57044.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|407054205|gb|AFS74256.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2011C-3493]
gi|407065465|gb|AFS86512.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|408298681|gb|EKJ16612.1| feS assembly protein SufD [Escherichia coli EC1865]
gi|408344966|gb|EKJ59312.1| feS assembly protein SufD [Escherichia coli 0.1288]
gi|412962998|emb|CCK46916.1| hypothetical protein BN16_22261 [Escherichia coli chi7122]
gi|412969553|emb|CCJ44190.1| hypothetical protein BN17_19391 [Escherichia coli]
gi|421938470|gb|EKT96044.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CFSAN001629]
gi|421939268|gb|EKT96797.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CFSAN001630]
gi|421940663|gb|EKT98113.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CFSAN001632]
gi|429347925|gb|EKY84697.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02030]
gi|429350433|gb|EKY87164.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354606|gb|EKY91302.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02092]
gi|429364725|gb|EKZ01344.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02093]
gi|429372375|gb|EKZ08925.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02281]
gi|429374325|gb|EKZ10865.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02318]
gi|429380050|gb|EKZ16549.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02913]
gi|429384430|gb|EKZ20887.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-03439]
gi|429386514|gb|EKZ22962.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-03943]
gi|429394133|gb|EKZ30514.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429394429|gb|EKZ30805.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429396438|gb|EKZ32790.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-04080]
gi|429407313|gb|EKZ43566.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429410144|gb|EKZ46367.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429418706|gb|EKZ54848.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429426304|gb|EKZ62393.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429426710|gb|EKZ62797.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429431274|gb|EKZ67323.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429440636|gb|EKZ76613.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429444216|gb|EKZ80162.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429449843|gb|EKZ85741.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429453706|gb|EKZ89574.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430899125|gb|ELC21230.1| FeS cluster assembly protein sufD [Escherichia coli KTE12]
gi|431105255|gb|ELE09590.1| FeS cluster assembly protein sufD [Escherichia coli KTE56]
gi|431310795|gb|ELF98975.1| FeS cluster assembly protein sufD [Escherichia coli KTE48]
gi|431355429|gb|ELG42137.1| FeS cluster assembly protein sufD [Escherichia coli KTE91]
gi|431362094|gb|ELG48672.1| FeS cluster assembly protein sufD [Escherichia coli KTE101]
gi|431375629|gb|ELG60952.1| FeS cluster assembly protein sufD [Escherichia coli KTE135]
gi|431385037|gb|ELG69024.1| FeS cluster assembly protein sufD [Escherichia coli KTE136]
gi|431453833|gb|ELH34215.1| FeS cluster assembly protein sufD [Escherichia coli KTE184]
gi|431470920|gb|ELH50813.1| FeS cluster assembly protein sufD [Escherichia coli KTE203]
gi|431611070|gb|ELI80350.1| FeS cluster assembly protein sufD [Escherichia coli KTE138]
gi|431647257|gb|ELJ14741.1| FeS cluster assembly protein sufD [Escherichia coli KTE163]
gi|431657773|gb|ELJ24735.1| FeS cluster assembly protein sufD [Escherichia coli KTE166]
gi|431717483|gb|ELJ81580.1| FeS cluster assembly protein sufD [Escherichia coli KTE90]
gi|449319265|gb|EMD09318.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O08]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|157161146|ref|YP_001458464.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli HS]
gi|170019969|ref|YP_001724923.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli ATCC 8739]
gi|188491802|ref|ZP_02999072.1| FeS assembly protein SufD [Escherichia coli 53638]
gi|432485431|ref|ZP_19727347.1| FeS cluster assembly protein sufD [Escherichia coli KTE212]
gi|432670759|ref|ZP_19906290.1| FeS cluster assembly protein sufD [Escherichia coli KTE119]
gi|432881918|ref|ZP_20097998.1| FeS cluster assembly protein sufD [Escherichia coli KTE154]
gi|433173540|ref|ZP_20358075.1| FeS cluster assembly protein sufD [Escherichia coli KTE232]
gi|157066826|gb|ABV06081.1| FeS assembly protein SufD [Escherichia coli HS]
gi|169754897|gb|ACA77596.1| FeS assembly protein SufD [Escherichia coli ATCC 8739]
gi|188487001|gb|EDU62104.1| FeS assembly protein SufD [Escherichia coli 53638]
gi|431015828|gb|ELD29375.1| FeS cluster assembly protein sufD [Escherichia coli KTE212]
gi|431210833|gb|ELF08816.1| FeS cluster assembly protein sufD [Escherichia coli KTE119]
gi|431411424|gb|ELG94535.1| FeS cluster assembly protein sufD [Escherichia coli KTE154]
gi|431693806|gb|ELJ59200.1| FeS cluster assembly protein sufD [Escherichia coli KTE232]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432481025|ref|ZP_19722983.1| FeS cluster assembly protein sufD [Escherichia coli KTE210]
gi|431007682|gb|ELD22493.1| FeS cluster assembly protein sufD [Escherichia coli KTE210]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|331663159|ref|ZP_08364069.1| FeS assembly protein SufD [Escherichia coli TA143]
gi|331058958|gb|EGI30935.1| FeS assembly protein SufD [Escherichia coli TA143]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|301326555|ref|ZP_07219896.1| FeS assembly protein SufD [Escherichia coli MS 78-1]
gi|300846775|gb|EFK74535.1| FeS assembly protein SufD [Escherichia coli MS 78-1]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432861809|ref|ZP_20086569.1| FeS cluster assembly protein sufD [Escherichia coli KTE146]
gi|431405556|gb|ELG88789.1| FeS cluster assembly protein sufD [Escherichia coli KTE146]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|425300453|ref|ZP_18690397.1| feS assembly protein SufD [Escherichia coli 07798]
gi|408216600|gb|EKI40914.1| feS assembly protein SufD [Escherichia coli 07798]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|425288548|ref|ZP_18679417.1| feS assembly protein SufD [Escherichia coli 3006]
gi|408215126|gb|EKI39530.1| feS assembly protein SufD [Escherichia coli 3006]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|417712656|ref|ZP_12361639.1| feS assembly protein SufD [Shigella flexneri K-272]
gi|417717178|ref|ZP_12366096.1| feS assembly protein SufD [Shigella flexneri K-227]
gi|333005923|gb|EGK25439.1| feS assembly protein SufD [Shigella flexneri K-272]
gi|333018832|gb|EGK38125.1| feS assembly protein SufD [Shigella flexneri K-227]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|419277996|ref|ZP_13820254.1| feS assembly protein SufD [Escherichia coli DEC10E]
gi|419375543|ref|ZP_13916574.1| feS assembly protein SufD [Escherichia coli DEC14B]
gi|378130776|gb|EHW92139.1| feS assembly protein SufD [Escherichia coli DEC10E]
gi|378221612|gb|EHX81858.1| feS assembly protein SufD [Escherichia coli DEC14B]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|417702397|ref|ZP_12351517.1| feS assembly protein SufD [Shigella flexneri K-218]
gi|333004018|gb|EGK23553.1| feS assembly protein SufD [Shigella flexneri K-218]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|309793447|ref|ZP_07687874.1| FeS assembly protein SufD [Escherichia coli MS 145-7]
gi|308123034|gb|EFO60296.1| FeS assembly protein SufD [Escherichia coli MS 145-7]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVFRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|215486856|ref|YP_002329287.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O127:H6 str. E2348/69]
gi|215264928|emb|CAS09314.1| component of SufBCD complex [Escherichia coli O127:H6 str.
E2348/69]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDNEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|422829010|ref|ZP_16877179.1| FeS cluster assembly protein sufD [Escherichia coli B093]
gi|371611657|gb|EHO00178.1| FeS cluster assembly protein sufD [Escherichia coli B093]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|260597666|ref|YP_003210237.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
turicensis z3032]
gi|260216843|emb|CBA30354.1| Protein sufD [Cronobacter turicensis z3032]
Length = 438
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + ++S L V+++ D +R L+H GYC RQLHK IV
Sbjct: 264 GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNTGYCNSRQLHKTIV- 320
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 321 RDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 380
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 381 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 429
>gi|432792886|ref|ZP_20026971.1| FeS cluster assembly protein sufD [Escherichia coli KTE78]
gi|432798844|ref|ZP_20032867.1| FeS cluster assembly protein sufD [Escherichia coli KTE79]
gi|431339630|gb|ELG26684.1| FeS cluster assembly protein sufD [Escherichia coli KTE78]
gi|431343711|gb|ELG30667.1| FeS cluster assembly protein sufD [Escherichia coli KTE79]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432543134|ref|ZP_19779985.1| FeS cluster assembly protein sufD [Escherichia coli KTE236]
gi|432548616|ref|ZP_19785397.1| FeS cluster assembly protein sufD [Escherichia coli KTE237]
gi|432621882|ref|ZP_19857916.1| FeS cluster assembly protein sufD [Escherichia coli KTE76]
gi|431075889|gb|ELD83409.1| FeS cluster assembly protein sufD [Escherichia coli KTE236]
gi|431081845|gb|ELD88172.1| FeS cluster assembly protein sufD [Escherichia coli KTE237]
gi|431159581|gb|ELE60125.1| FeS cluster assembly protein sufD [Escherichia coli KTE76]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|331657655|ref|ZP_08358617.1| FeS assembly protein SufD [Escherichia coli TA206]
gi|331055903|gb|EGI27912.1| FeS assembly protein SufD [Escherichia coli TA206]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|331647172|ref|ZP_08348266.1| FeS assembly protein SufD [Escherichia coli M605]
gi|417662270|ref|ZP_12311851.1| iron-sulfur cluster assembly protein SufD [Escherichia coli AA86]
gi|432801839|ref|ZP_20035820.1| FeS cluster assembly protein sufD [Escherichia coli KTE84]
gi|330911488|gb|EGH39998.1| iron-sulfur cluster assembly protein SufD [Escherichia coli AA86]
gi|331043955|gb|EGI16091.1| FeS assembly protein SufD [Escherichia coli M605]
gi|431348816|gb|ELG35658.1| FeS cluster assembly protein sufD [Escherichia coli KTE84]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|91210894|ref|YP_540880.1| cysteine desulfurase [Escherichia coli UTI89]
gi|117623860|ref|YP_852773.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli APEC O1]
gi|218558550|ref|YP_002391463.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli S88]
gi|218689623|ref|YP_002397835.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli ED1a]
gi|237705627|ref|ZP_04536108.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 3_2_53FAA]
gi|331683188|ref|ZP_08383789.1| FeS assembly protein SufD [Escherichia coli H299]
gi|386599480|ref|YP_006100986.1| FeS assembly protein SufD [Escherichia coli IHE3034]
gi|386604349|ref|YP_006110649.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UM146]
gi|419946497|ref|ZP_14462897.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli HM605]
gi|422359811|ref|ZP_16440448.1| FeS assembly protein SufD [Escherichia coli MS 110-3]
gi|422748912|ref|ZP_16802824.1| FeS assembly protein SufD [Escherichia coli H252]
gi|422755017|ref|ZP_16808842.1| FeS assembly protein SufD [Escherichia coli H263]
gi|422838394|ref|ZP_16886367.1| FeS cluster assembly protein sufD [Escherichia coli H397]
gi|432358021|ref|ZP_19601250.1| FeS cluster assembly protein sufD [Escherichia coli KTE4]
gi|432362646|ref|ZP_19605817.1| FeS cluster assembly protein sufD [Escherichia coli KTE5]
gi|432573718|ref|ZP_19810200.1| FeS cluster assembly protein sufD [Escherichia coli KTE55]
gi|432587945|ref|ZP_19824301.1| FeS cluster assembly protein sufD [Escherichia coli KTE58]
gi|432597668|ref|ZP_19833944.1| FeS cluster assembly protein sufD [Escherichia coli KTE62]
gi|432616655|ref|ZP_19852776.1| FeS cluster assembly protein sufD [Escherichia coli KTE75]
gi|432754429|ref|ZP_19988980.1| FeS cluster assembly protein sufD [Escherichia coli KTE22]
gi|432778559|ref|ZP_20012802.1| FeS cluster assembly protein sufD [Escherichia coli KTE59]
gi|432787505|ref|ZP_20021637.1| FeS cluster assembly protein sufD [Escherichia coli KTE65]
gi|432820941|ref|ZP_20054633.1| FeS cluster assembly protein sufD [Escherichia coli KTE118]
gi|432827085|ref|ZP_20060737.1| FeS cluster assembly protein sufD [Escherichia coli KTE123]
gi|433005138|ref|ZP_20193568.1| FeS cluster assembly protein sufD [Escherichia coli KTE227]
gi|433007636|ref|ZP_20196054.1| FeS cluster assembly protein sufD [Escherichia coli KTE229]
gi|433153756|ref|ZP_20338711.1| FeS cluster assembly protein sufD [Escherichia coli KTE176]
gi|433163466|ref|ZP_20348211.1| FeS cluster assembly protein sufD [Escherichia coli KTE179]
gi|433168587|ref|ZP_20353220.1| FeS cluster assembly protein sufD [Escherichia coli KTE180]
gi|450189075|ref|ZP_21890396.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SEPT362]
gi|91072468|gb|ABE07349.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli UTI89]
gi|115512984|gb|ABJ01059.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli APEC O1]
gi|218365319|emb|CAR03040.1| component of SufBCD complex [Escherichia coli S88]
gi|218427187|emb|CAR08073.2| component of SufBCD complex [Escherichia coli ED1a]
gi|226900384|gb|EEH86643.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 3_2_53FAA]
gi|294493567|gb|ADE92323.1| FeS assembly protein SufD [Escherichia coli IHE3034]
gi|307626833|gb|ADN71137.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UM146]
gi|315286393|gb|EFU45829.1| FeS assembly protein SufD [Escherichia coli MS 110-3]
gi|323952188|gb|EGB48061.1| FeS assembly protein SufD [Escherichia coli H252]
gi|323956582|gb|EGB52320.1| FeS assembly protein SufD [Escherichia coli H263]
gi|331079403|gb|EGI50600.1| FeS assembly protein SufD [Escherichia coli H299]
gi|371614318|gb|EHO02803.1| FeS cluster assembly protein sufD [Escherichia coli H397]
gi|388412618|gb|EIL72666.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli HM605]
gi|430878005|gb|ELC01437.1| FeS cluster assembly protein sufD [Escherichia coli KTE4]
gi|430887185|gb|ELC10012.1| FeS cluster assembly protein sufD [Escherichia coli KTE5]
gi|431108429|gb|ELE12401.1| FeS cluster assembly protein sufD [Escherichia coli KTE55]
gi|431120278|gb|ELE23276.1| FeS cluster assembly protein sufD [Escherichia coli KTE58]
gi|431130535|gb|ELE32618.1| FeS cluster assembly protein sufD [Escherichia coli KTE62]
gi|431154895|gb|ELE55656.1| FeS cluster assembly protein sufD [Escherichia coli KTE75]
gi|431302630|gb|ELF91809.1| FeS cluster assembly protein sufD [Escherichia coli KTE22]
gi|431326712|gb|ELG14057.1| FeS cluster assembly protein sufD [Escherichia coli KTE59]
gi|431337222|gb|ELG24310.1| FeS cluster assembly protein sufD [Escherichia coli KTE65]
gi|431367788|gb|ELG54256.1| FeS cluster assembly protein sufD [Escherichia coli KTE118]
gi|431372334|gb|ELG57996.1| FeS cluster assembly protein sufD [Escherichia coli KTE123]
gi|431515043|gb|ELH92870.1| FeS cluster assembly protein sufD [Escherichia coli KTE227]
gi|431524169|gb|ELI01116.1| FeS cluster assembly protein sufD [Escherichia coli KTE229]
gi|431675213|gb|ELJ41358.1| FeS cluster assembly protein sufD [Escherichia coli KTE176]
gi|431688553|gb|ELJ54071.1| FeS cluster assembly protein sufD [Escherichia coli KTE179]
gi|431688911|gb|ELJ54428.1| FeS cluster assembly protein sufD [Escherichia coli KTE180]
gi|449322109|gb|EMD12110.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SEPT362]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|419175367|ref|ZP_13719212.1| feS assembly protein SufD [Escherichia coli DEC7B]
gi|378034898|gb|EHV97462.1| feS assembly protein SufD [Escherichia coli DEC7B]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|170680131|ref|YP_001743573.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SMS-3-5]
gi|170517849|gb|ACB16027.1| FeS assembly protein SufD [Escherichia coli SMS-3-5]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432369801|ref|ZP_19612890.1| FeS cluster assembly protein sufD [Escherichia coli KTE10]
gi|430885428|gb|ELC08299.1| FeS cluster assembly protein sufD [Escherichia coli KTE10]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432531052|ref|ZP_19768082.1| FeS cluster assembly protein sufD [Escherichia coli KTE233]
gi|431054993|gb|ELD64557.1| FeS cluster assembly protein sufD [Escherichia coli KTE233]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|443617761|ref|YP_007381617.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli APEC O78]
gi|443422269|gb|AGC87173.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli APEC O78]
Length = 239
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 65 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 122
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 123 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 181
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 182 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 230
>gi|386701354|ref|YP_006165191.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KO11FL]
gi|383392881|gb|AFH17839.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KO11FL]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|423139795|ref|ZP_17127433.1| FeS assembly protein SufD [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379052349|gb|EHY70240.1| FeS assembly protein SufD [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 123/221 (55%), Gaps = 5/221 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
++ + L V + + ++RH L ++ ++ H + T + G + RH+
Sbjct: 197 HFTGARLTVKVAENAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHH 256
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+ G+AVF
Sbjct: 257 SSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVF 313
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I +++ Q+F
Sbjct: 314 NGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMF 373
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
Y Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 374 YLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|126668347|ref|ZP_01739305.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
gi|126627163|gb|EAZ97802.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
Length = 428
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 5/221 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G++ N+V E + +G ++ L + + HI T VRQ TAS +E V GG L
Sbjct: 196 GSEPVMVNTVTEFFLAEGARITSVRLTLEGESVQHIGATGVRQATASRFESHCVGFGGPL 255
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 318
RH++ V+ G E +L+ + Q D H+ + +H +C + ++ I A
Sbjct: 256 RRHDLQVRLEGEGAECKLNGVVVTQGKQHYDNHTSI--EHIAAHCDSEETYRNIAA-GQS 312
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
A+F+G + +++ AQ+++A ++LLL A ++ KP L+I ADDVKC+HGA I L +
Sbjct: 313 HAIFNGRIHIHQDAQKSNANMSNKNLLLSTGAEIDTKPELEIYADDVKCAHGATIGQLNK 372
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+ LFY +RG+ A L +F E++E+ P ++R V
Sbjct: 373 TSLFYLVSRGVGRREANTLLTIAFINELVEQIPVEAVREAV 413
>gi|193065302|ref|ZP_03046374.1| FeS assembly protein SufD [Escherichia coli E22]
gi|194429495|ref|ZP_03062017.1| FeS assembly protein SufD [Escherichia coli B171]
gi|260843987|ref|YP_003221765.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|415794916|ref|ZP_11496663.1| feS assembly protein SufD [Escherichia coli E128010]
gi|417172717|ref|ZP_12002750.1| FeS assembly protein SufD [Escherichia coli 3.2608]
gi|417184815|ref|ZP_12010349.1| FeS assembly protein SufD [Escherichia coli 93.0624]
gi|417252026|ref|ZP_12043789.1| FeS assembly protein SufD [Escherichia coli 4.0967]
gi|417623366|ref|ZP_12273673.1| feS assembly protein SufD [Escherichia coli STEC_H.1.8]
gi|419289574|ref|ZP_13831669.1| feS assembly protein SufD [Escherichia coli DEC11A]
gi|419294864|ref|ZP_13836910.1| feS assembly protein SufD [Escherichia coli DEC11B]
gi|419300223|ref|ZP_13842225.1| feS assembly protein SufD [Escherichia coli DEC11C]
gi|419306322|ref|ZP_13848226.1| feS assembly protein SufD [Escherichia coli DEC11D]
gi|419311344|ref|ZP_13853212.1| feS assembly protein SufD [Escherichia coli DEC11E]
gi|419316670|ref|ZP_13858485.1| feS assembly protein SufD [Escherichia coli DEC12A]
gi|419322773|ref|ZP_13864486.1| feS assembly protein SufD [Escherichia coli DEC12B]
gi|419328815|ref|ZP_13870432.1| feS assembly protein SufD [Escherichia coli DEC12C]
gi|419334373|ref|ZP_13875917.1| feS assembly protein SufD [Escherichia coli DEC12D]
gi|419339938|ref|ZP_13881415.1| feS assembly protein SufD [Escherichia coli DEC12E]
gi|419869320|ref|ZP_14391524.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O103:H2 str. CVM9450]
gi|420391358|ref|ZP_14890615.1| feS assembly protein SufD [Escherichia coli EPEC C342-62]
gi|192927096|gb|EDV81718.1| FeS assembly protein SufD [Escherichia coli E22]
gi|194412459|gb|EDX28759.1| FeS assembly protein SufD [Escherichia coli B171]
gi|257759134|dbj|BAI30631.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|323163469|gb|EFZ49295.1| feS assembly protein SufD [Escherichia coli E128010]
gi|345380007|gb|EGX11913.1| feS assembly protein SufD [Escherichia coli STEC_H.1.8]
gi|378131505|gb|EHW92862.1| feS assembly protein SufD [Escherichia coli DEC11A]
gi|378141951|gb|EHX03153.1| feS assembly protein SufD [Escherichia coli DEC11B]
gi|378149757|gb|EHX10877.1| feS assembly protein SufD [Escherichia coli DEC11D]
gi|378152193|gb|EHX13294.1| feS assembly protein SufD [Escherichia coli DEC11C]
gi|378159001|gb|EHX20015.1| feS assembly protein SufD [Escherichia coli DEC11E]
gi|378169429|gb|EHX30327.1| feS assembly protein SufD [Escherichia coli DEC12B]
gi|378171922|gb|EHX32784.1| feS assembly protein SufD [Escherichia coli DEC12A]
gi|378172572|gb|EHX33423.1| feS assembly protein SufD [Escherichia coli DEC12C]
gi|378186586|gb|EHX47209.1| feS assembly protein SufD [Escherichia coli DEC12D]
gi|378191404|gb|EHX51980.1| feS assembly protein SufD [Escherichia coli DEC12E]
gi|386180415|gb|EIH57889.1| FeS assembly protein SufD [Escherichia coli 3.2608]
gi|386183284|gb|EIH66033.1| FeS assembly protein SufD [Escherichia coli 93.0624]
gi|386217601|gb|EII34086.1| FeS assembly protein SufD [Escherichia coli 4.0967]
gi|388342525|gb|EIL08559.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O103:H2 str. CVM9450]
gi|391313123|gb|EIQ70716.1| feS assembly protein SufD [Escherichia coli EPEC C342-62]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|24113070|ref|NP_707580.1| cysteine desulfurase [Shigella flexneri 2a str. 301]
gi|30063195|ref|NP_837366.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 2a str. 2457T]
gi|384543332|ref|YP_005727395.1| putative Selenocysteine lyase [Shigella flexneri 2002017]
gi|415856750|ref|ZP_11531629.1| feS assembly protein SufD [Shigella flexneri 2a str. 2457T]
gi|417707644|ref|ZP_12356689.1| feS assembly protein SufD [Shigella flexneri VA-6]
gi|417723162|ref|ZP_12371978.1| feS assembly protein SufD [Shigella flexneri K-304]
gi|417728474|ref|ZP_12377189.1| feS assembly protein SufD [Shigella flexneri K-671]
gi|417733625|ref|ZP_12382282.1| feS assembly protein SufD [Shigella flexneri 2747-71]
gi|417738632|ref|ZP_12387219.1| feS assembly protein SufD [Shigella flexneri 4343-70]
gi|417743394|ref|ZP_12391930.1| feS assembly protein SufD [Shigella flexneri 2930-71]
gi|417827884|ref|ZP_12474447.1| feS assembly protein SufD [Shigella flexneri J1713]
gi|418256034|ref|ZP_12880250.1| feS assembly protein SufD [Shigella flexneri 6603-63]
gi|420320244|ref|ZP_14822082.1| feS assembly protein SufD [Shigella flexneri 2850-71]
gi|420331117|ref|ZP_14832792.1| feS assembly protein SufD [Shigella flexneri K-1770]
gi|420341891|ref|ZP_14843383.1| feS assembly protein SufD [Shigella flexneri K-404]
gi|420372539|ref|ZP_14872792.1| feS assembly protein SufD [Shigella flexneri 1235-66]
gi|24052043|gb|AAN43287.1| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30041447|gb|AAP17175.1| hypothetical protein S1843 [Shigella flexneri 2a str. 2457T]
gi|281601118|gb|ADA74102.1| putative Selenocysteine lyase [Shigella flexneri 2002017]
gi|313648963|gb|EFS13400.1| feS assembly protein SufD [Shigella flexneri 2a str. 2457T]
gi|332757001|gb|EGJ87344.1| feS assembly protein SufD [Shigella flexneri 4343-70]
gi|332757784|gb|EGJ88113.1| feS assembly protein SufD [Shigella flexneri 2747-71]
gi|332758522|gb|EGJ88843.1| feS assembly protein SufD [Shigella flexneri K-671]
gi|332766887|gb|EGJ97087.1| feS assembly protein SufD [Shigella flexneri 2930-71]
gi|333003808|gb|EGK23344.1| feS assembly protein SufD [Shigella flexneri VA-6]
gi|333017958|gb|EGK37263.1| feS assembly protein SufD [Shigella flexneri K-304]
gi|335575717|gb|EGM61994.1| feS assembly protein SufD [Shigella flexneri J1713]
gi|391251284|gb|EIQ10500.1| feS assembly protein SufD [Shigella flexneri 2850-71]
gi|391254608|gb|EIQ13769.1| feS assembly protein SufD [Shigella flexneri K-1770]
gi|391268698|gb|EIQ27619.1| feS assembly protein SufD [Shigella flexneri K-404]
gi|391318150|gb|EIQ75345.1| feS assembly protein SufD [Shigella flexneri 1235-66]
gi|397898317|gb|EJL14706.1| feS assembly protein SufD [Shigella flexneri 6603-63]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432602201|ref|ZP_19838445.1| FeS cluster assembly protein sufD [Escherichia coli KTE66]
gi|431140775|gb|ELE42540.1| FeS cluster assembly protein sufD [Escherichia coli KTE66]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432868882|ref|ZP_20089677.1| FeS cluster assembly protein sufD [Escherichia coli KTE147]
gi|431410798|gb|ELG93941.1| FeS cluster assembly protein sufD [Escherichia coli KTE147]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|16129637|ref|NP_416196.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
str. K-12 substr. MG1655]
gi|170081341|ref|YP_001730661.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli str. K-12 substr. DH10B]
gi|238900896|ref|YP_002926692.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli BW2952]
gi|300951273|ref|ZP_07165122.1| FeS assembly protein SufD [Escherichia coli MS 116-1]
gi|300958562|ref|ZP_07170692.1| FeS assembly protein SufD [Escherichia coli MS 175-1]
gi|301027874|ref|ZP_07191175.1| FeS assembly protein SufD [Escherichia coli MS 196-1]
gi|301647864|ref|ZP_07247646.1| FeS assembly protein SufD [Escherichia coli MS 146-1]
gi|331642279|ref|ZP_08343414.1| FeS assembly protein SufD [Escherichia coli H736]
gi|386280746|ref|ZP_10058410.1| FeS cluster assembly protein sufD [Escherichia sp. 4_1_40B]
gi|386595507|ref|YP_006091907.1| FeS assembly protein SufD [Escherichia coli DH1]
gi|387612170|ref|YP_006115286.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli ETEC H10407]
gi|387621399|ref|YP_006129026.1| cysteine desulfurase activator complex subunitSufD [Escherichia
coli DH1]
gi|388477755|ref|YP_489943.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
W3110]
gi|404375047|ref|ZP_10980237.1| FeS cluster assembly protein sufD [Escherichia sp. 1_1_43]
gi|415773556|ref|ZP_11486151.1| feS assembly protein SufD [Escherichia coli 3431]
gi|417261896|ref|ZP_12049384.1| FeS assembly protein SufD [Escherichia coli 2.3916]
gi|417273007|ref|ZP_12060356.1| FeS assembly protein SufD [Escherichia coli 2.4168]
gi|417276941|ref|ZP_12064267.1| FeS assembly protein SufD [Escherichia coli 3.2303]
gi|417292386|ref|ZP_12079667.1| FeS assembly protein SufD [Escherichia coli B41]
gi|417613044|ref|ZP_12263506.1| feS assembly protein SufD [Escherichia coli STEC_EH250]
gi|417618223|ref|ZP_12268644.1| feS assembly protein SufD [Escherichia coli G58-1]
gi|417634588|ref|ZP_12284802.1| feS assembly protein SufD [Escherichia coli STEC_S1191]
gi|417943351|ref|ZP_12586599.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli XH140A]
gi|417974777|ref|ZP_12615578.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli XH001]
gi|418302939|ref|ZP_12914733.1| feS assembly protein SufD [Escherichia coli UMNF18]
gi|418957962|ref|ZP_13509885.1| FeS assembly protein SufD [Escherichia coli J53]
gi|419153774|ref|ZP_13698346.1| feS assembly protein SufD [Escherichia coli DEC6C]
gi|419159166|ref|ZP_13703675.1| feS assembly protein SufD [Escherichia coli DEC6D]
gi|419164387|ref|ZP_13708844.1| feS assembly protein SufD [Escherichia coli DEC6E]
gi|419809823|ref|ZP_14334707.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O32:H37 str. P4]
gi|422766246|ref|ZP_16819973.1| FeS assembly protein SufD [Escherichia coli E1520]
gi|422772443|ref|ZP_16826131.1| FeS assembly protein SufD [Escherichia coli E482]
gi|423704854|ref|ZP_17679277.1| FeS cluster assembly protein sufD [Escherichia coli H730]
gi|425115055|ref|ZP_18516863.1| feS assembly protein SufD [Escherichia coli 8.0566]
gi|425119779|ref|ZP_18521485.1| feS assembly protein SufD [Escherichia coli 8.0569]
gi|425272780|ref|ZP_18664214.1| feS assembly protein SufD [Escherichia coli TW15901]
gi|425283264|ref|ZP_18674325.1| feS assembly protein SufD [Escherichia coli TW00353]
gi|425305222|ref|ZP_18694967.1| feS assembly protein SufD [Escherichia coli N1]
gi|432416896|ref|ZP_19659507.1| FeS cluster assembly protein sufD [Escherichia coli KTE44]
gi|432563874|ref|ZP_19800465.1| FeS cluster assembly protein sufD [Escherichia coli KTE51]
gi|432627267|ref|ZP_19863247.1| FeS cluster assembly protein sufD [Escherichia coli KTE77]
gi|432636903|ref|ZP_19872779.1| FeS cluster assembly protein sufD [Escherichia coli KTE81]
gi|432660914|ref|ZP_19896560.1| FeS cluster assembly protein sufD [Escherichia coli KTE111]
gi|432685468|ref|ZP_19920770.1| FeS cluster assembly protein sufD [Escherichia coli KTE156]
gi|432691617|ref|ZP_19926848.1| FeS cluster assembly protein sufD [Escherichia coli KTE161]
gi|432704433|ref|ZP_19939537.1| FeS cluster assembly protein sufD [Escherichia coli KTE171]
gi|432737170|ref|ZP_19971936.1| FeS cluster assembly protein sufD [Escherichia coli KTE42]
gi|432955115|ref|ZP_20147055.1| FeS cluster assembly protein sufD [Escherichia coli KTE197]
gi|433047958|ref|ZP_20235328.1| FeS cluster assembly protein sufD [Escherichia coli KTE120]
gi|442593362|ref|ZP_21011313.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|450244221|ref|ZP_21900184.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli S17]
gi|3025254|sp|P77689.1|SUFD_ECOLI RecName: Full=FeS cluster assembly protein SufD
gi|224983401|pdb|2ZU0|A Chain A, Crystal Structure Of Sufc-Sufd Complex Involved In The
Iron- Sulfur Cluster Biosynthesis
gi|224983402|pdb|2ZU0|B Chain B, Crystal Structure Of Sufc-Sufd Complex Involved In The
Iron- Sulfur Cluster Biosynthesis
gi|1742765|dbj|BAA15456.1| component of SufBCD complex [Escherichia coli str. K12 substr.
W3110]
gi|1787971|gb|AAC74751.1| component of SufBCD Fe-S cluster assembly scaffold [Escherichia
coli str. K-12 substr. MG1655]
gi|169889176|gb|ACB02883.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|238860170|gb|ACR62168.1| component of SufBCD complex [Escherichia coli BW2952]
gi|260449196|gb|ACX39618.1| FeS assembly protein SufD [Escherichia coli DH1]
gi|299879030|gb|EFI87241.1| FeS assembly protein SufD [Escherichia coli MS 196-1]
gi|300314771|gb|EFJ64555.1| FeS assembly protein SufD [Escherichia coli MS 175-1]
gi|300449454|gb|EFK13074.1| FeS assembly protein SufD [Escherichia coli MS 116-1]
gi|301074005|gb|EFK88811.1| FeS assembly protein SufD [Escherichia coli MS 146-1]
gi|309701906|emb|CBJ01218.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli ETEC H10407]
gi|315136322|dbj|BAJ43481.1| cysteine desulfurase activator complex subunitSufD [Escherichia
coli DH1]
gi|315618876|gb|EFU99459.1| feS assembly protein SufD [Escherichia coli 3431]
gi|323937284|gb|EGB33563.1| FeS assembly protein SufD [Escherichia coli E1520]
gi|323940652|gb|EGB36843.1| FeS assembly protein SufD [Escherichia coli E482]
gi|331039077|gb|EGI11297.1| FeS assembly protein SufD [Escherichia coli H736]
gi|339415037|gb|AEJ56709.1| feS assembly protein SufD [Escherichia coli UMNF18]
gi|342364677|gb|EGU28776.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli XH140A]
gi|344195386|gb|EGV49455.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli XH001]
gi|345363510|gb|EGW95652.1| feS assembly protein SufD [Escherichia coli STEC_EH250]
gi|345378530|gb|EGX10460.1| feS assembly protein SufD [Escherichia coli G58-1]
gi|345388079|gb|EGX17890.1| feS assembly protein SufD [Escherichia coli STEC_S1191]
gi|359332160|dbj|BAL38607.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
MDS42]
gi|377999461|gb|EHV62542.1| feS assembly protein SufD [Escherichia coli DEC6C]
gi|378009210|gb|EHV72166.1| feS assembly protein SufD [Escherichia coli DEC6D]
gi|378010469|gb|EHV73414.1| feS assembly protein SufD [Escherichia coli DEC6E]
gi|384379571|gb|EIE37439.1| FeS assembly protein SufD [Escherichia coli J53]
gi|385157385|gb|EIF19377.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O32:H37 str. P4]
gi|385705497|gb|EIG42562.1| FeS cluster assembly protein sufD [Escherichia coli H730]
gi|386121929|gb|EIG70542.1| FeS cluster assembly protein sufD [Escherichia sp. 4_1_40B]
gi|386225023|gb|EII47358.1| FeS assembly protein SufD [Escherichia coli 2.3916]
gi|386236707|gb|EII68683.1| FeS assembly protein SufD [Escherichia coli 2.4168]
gi|386240430|gb|EII77354.1| FeS assembly protein SufD [Escherichia coli 3.2303]
gi|386254708|gb|EIJ04398.1| FeS assembly protein SufD [Escherichia coli B41]
gi|404291475|gb|EJZ48361.1| FeS cluster assembly protein sufD [Escherichia sp. 1_1_43]
gi|408194448|gb|EKI19926.1| feS assembly protein SufD [Escherichia coli TW15901]
gi|408203192|gb|EKI28249.1| feS assembly protein SufD [Escherichia coli TW00353]
gi|408229893|gb|EKI53318.1| feS assembly protein SufD [Escherichia coli N1]
gi|408569473|gb|EKK45460.1| feS assembly protein SufD [Escherichia coli 8.0566]
gi|408570720|gb|EKK46676.1| feS assembly protein SufD [Escherichia coli 8.0569]
gi|430940258|gb|ELC60441.1| FeS cluster assembly protein sufD [Escherichia coli KTE44]
gi|431094861|gb|ELE00489.1| FeS cluster assembly protein sufD [Escherichia coli KTE51]
gi|431163960|gb|ELE64361.1| FeS cluster assembly protein sufD [Escherichia coli KTE77]
gi|431171892|gb|ELE72043.1| FeS cluster assembly protein sufD [Escherichia coli KTE81]
gi|431200030|gb|ELE98756.1| FeS cluster assembly protein sufD [Escherichia coli KTE111]
gi|431222503|gb|ELF19779.1| FeS cluster assembly protein sufD [Escherichia coli KTE156]
gi|431227092|gb|ELF24229.1| FeS cluster assembly protein sufD [Escherichia coli KTE161]
gi|431243739|gb|ELF38067.1| FeS cluster assembly protein sufD [Escherichia coli KTE171]
gi|431284270|gb|ELF75128.1| FeS cluster assembly protein sufD [Escherichia coli KTE42]
gi|431467786|gb|ELH47792.1| FeS cluster assembly protein sufD [Escherichia coli KTE197]
gi|431566341|gb|ELI39377.1| FeS cluster assembly protein sufD [Escherichia coli KTE120]
gi|441606848|emb|CCP96640.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|449321574|gb|EMD11585.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli S17]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|417084616|ref|ZP_11952255.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli cloneA_i1]
gi|355351791|gb|EHG00978.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli cloneA_i1]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|422781464|ref|ZP_16834249.1| FeS assembly protein SufD [Escherichia coli TW10509]
gi|323978182|gb|EGB73268.1| FeS assembly protein SufD [Escherichia coli TW10509]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|422805721|ref|ZP_16854153.1| FeS assembly protein SufD [Escherichia fergusonii B253]
gi|424816122|ref|ZP_18241273.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ECD227]
gi|324113446|gb|EGC07421.1| FeS assembly protein SufD [Escherichia fergusonii B253]
gi|325497142|gb|EGC95001.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ECD227]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432718795|ref|ZP_19953764.1| FeS cluster assembly protein sufD [Escherichia coli KTE9]
gi|431262607|gb|ELF54596.1| FeS cluster assembly protein sufD [Escherichia coli KTE9]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|422973778|ref|ZP_16975946.1| FeS cluster assembly protein sufD [Escherichia coli TA124]
gi|371596627|gb|EHN85464.1| FeS cluster assembly protein sufD [Escherichia coli TA124]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|387607302|ref|YP_006096158.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli 042]
gi|284921602|emb|CBG34674.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli 042]
Length = 423
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432850666|ref|ZP_20081361.1| FeS cluster assembly protein sufD [Escherichia coli KTE144]
gi|431399988|gb|ELG83370.1| FeS cluster assembly protein sufD [Escherichia coli KTE144]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|429753386|ref|ZP_19286193.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 326 str.
F0382]
gi|429173667|gb|EKY15179.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 326 str.
F0382]
Length = 433
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 113/223 (50%), Gaps = 1/223 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V E + K + + LQN SL A+ I T + QE S + S GG L+R+N++
Sbjct: 209 NAVTEAFVAKEAFLDYYKLQNDSLTASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G E+ L +L Q D ++ + +P Q +K IV+ VF+G +
Sbjct: 269 YHQGEYLESTLKGLSILKGTQHTDHYTLVNHAYPNCESHQDYKSIVSDE-ATNVFNGKIM 327
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L LFY Q R
Sbjct: 328 VEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTR 387
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GI + A L ++F V+E P++ + + +G T
Sbjct: 388 GIGKKEASALLTYAFANTVLESVKIPALSEYINRIIAEKLGVT 430
>gi|425072377|ref|ZP_18475483.1| FeS assembly protein SufD [Proteus mirabilis WGLW4]
gi|404597592|gb|EKA98089.1| FeS assembly protein SufD [Proteus mirabilis WGLW4]
Length = 435
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 11/233 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELV 252
Y+ ++G + ++ + L IG H + + S + AH + R + Y +
Sbjct: 202 YISSDGENRHFTGARLTATIGDNASFNHIKLGFENDISQHFAHNDLSIGRDARVNSYAFL 261
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 310
G KLSRH+ G ++E ++S L +++ D +R L H C RQLHK
Sbjct: 262 ---LGNKLSRHHTSAALTGENSELSMNSVVLPKANEIAD--TRTWLVHGEKNCLSRQLHK 316
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
I A G+AVF+G + V A +TD +LLL +A ++ KP L+I ADDVKCSHG
Sbjct: 317 SI-AMDAGKAVFNGMITVTPQALKTDGQMTNNNLLLGDKAQIDTKPQLEIYADDVKCSHG 375
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
A + +++ QLFY ++RGI L ARK ++ +F AE+ E I+ V+ +
Sbjct: 376 ATVGRIDDEQLFYLRSRGIALSEARKMIIHAFAAELTESLENSVIKTHVLERI 428
>gi|300938996|ref|ZP_07153694.1| FeS assembly protein SufD [Escherichia coli MS 21-1]
gi|300456099|gb|EFK19592.1| FeS assembly protein SufD [Escherichia coli MS 21-1]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432392089|ref|ZP_19634929.1| FeS cluster assembly protein sufD [Escherichia coli KTE21]
gi|430919906|gb|ELC40826.1| FeS cluster assembly protein sufD [Escherichia coli KTE21]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|419142312|ref|ZP_13687059.1| feS assembly protein SufD [Escherichia coli DEC6A]
gi|419148283|ref|ZP_13692960.1| feS assembly protein SufD [Escherichia coli DEC6B]
gi|422817038|ref|ZP_16865252.1| FeS cluster assembly protein sufD [Escherichia coli M919]
gi|377995799|gb|EHV58911.1| feS assembly protein SufD [Escherichia coli DEC6B]
gi|377996621|gb|EHV59729.1| feS assembly protein SufD [Escherichia coli DEC6A]
gi|385539709|gb|EIF86541.1| FeS cluster assembly protein sufD [Escherichia coli M919]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|218699754|ref|YP_002407383.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli IAI39]
gi|386624299|ref|YP_006144027.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
O7:K1 str. CE10]
gi|218369740|emb|CAR17511.1| component of SufBCD complex [Escherichia coli IAI39]
gi|349738037|gb|AEQ12743.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
O7:K1 str. CE10]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|421774034|ref|ZP_16210647.1| FeS assembly protein SufD [Escherichia coli AD30]
gi|408460664|gb|EKJ84442.1| FeS assembly protein SufD [Escherichia coli AD30]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|301026911|ref|ZP_07190307.1| FeS assembly protein SufD [Escherichia coli MS 69-1]
gi|419921015|ref|ZP_14439111.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KD2]
gi|432489290|ref|ZP_19731171.1| FeS cluster assembly protein sufD [Escherichia coli KTE213]
gi|432839305|ref|ZP_20072792.1| FeS cluster assembly protein sufD [Escherichia coli KTE140]
gi|433203258|ref|ZP_20387039.1| FeS cluster assembly protein sufD [Escherichia coli KTE95]
gi|300395258|gb|EFJ78796.1| FeS assembly protein SufD [Escherichia coli MS 69-1]
gi|388383325|gb|EIL45104.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KD2]
gi|431021326|gb|ELD34649.1| FeS cluster assembly protein sufD [Escherichia coli KTE213]
gi|431389457|gb|ELG73168.1| FeS cluster assembly protein sufD [Escherichia coli KTE140]
gi|431722326|gb|ELJ86292.1| FeS cluster assembly protein sufD [Escherichia coli KTE95]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432947556|ref|ZP_20142712.1| FeS cluster assembly protein sufD [Escherichia coli KTE196]
gi|433043279|ref|ZP_20230780.1| FeS cluster assembly protein sufD [Escherichia coli KTE117]
gi|431457534|gb|ELH37871.1| FeS cluster assembly protein sufD [Escherichia coli KTE196]
gi|431556610|gb|ELI30385.1| FeS cluster assembly protein sufD [Escherichia coli KTE117]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|40889898|pdb|1VH4|A Chain A, Crystal Structure Of A Stabilizer Of Iron Transporter
gi|40889899|pdb|1VH4|B Chain B, Crystal Structure Of A Stabilizer Of Iron Transporter
Length = 435
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 251 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 309 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 367
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 368 RIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 416
>gi|419941760|ref|ZP_14458420.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 75]
gi|388399773|gb|EIL60552.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 75]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|293409994|ref|ZP_06653570.1| FeS assembly protein SufD [Escherichia coli B354]
gi|291470462|gb|EFF12946.1| FeS assembly protein SufD [Escherichia coli B354]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|302383288|ref|YP_003819111.1| SufBD protein [Brevundimonas subvibrioides ATCC 15264]
gi|302193916|gb|ADL01488.1| SufBD protein [Brevundimonas subvibrioides ATCC 15264]
Length = 337
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 163/348 (46%), Gaps = 24/348 (6%)
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLID 135
LRD S+ +PSR+ E +++TD + + ++ PS ++ ++ F +L
Sbjct: 6 LRDPST-------FPSRRVEAWKYTDLARV----LRETPPPSPAVTIAPGGPFAAL---- 50
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
L +N G VG+ V+ G F+S+ ++ P +
Sbjct: 51 ---GGEELAFAN---GRAVGADAFVASGEQTLRLRFVSDATGTGHSAAVRIAVRPGARLT 104
Query: 196 YVPA-EGN-DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
+ + EG+ Y AN+ +E+ I G +V L ++ +A + T+V+ + Y
Sbjct: 105 LLESHEGSGSAYVANTRIELDIPAGAEVTRVVLIDEPADAISVAVTSVKTAAGAVYRQTT 164
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
V+ G +L R H+ G TE L + L ++ DL S + + G QL K +V
Sbjct: 165 VTHGARLQRQETHLAHGGEGTEIVLDGLYALSGERHSDLTSVVRHNGLNGVTSQLTKGVV 224
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ VF G + V R A TDA +L+L RA V+ KP L+I ADDV+C+HG +
Sbjct: 225 -RDTARGVFQGKIVVERGADGTDARMGHHALILGERAEVDAKPELEIYADDVQCAHGNTV 283
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
+L+ES LFY + RGI + AR L +F EV++R R +V S
Sbjct: 284 GNLDESALFYMEQRGIPADEARALLTQAFLFEVVDRIADEGAREEVRS 331
>gi|417349391|ref|ZP_12128080.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|417391373|ref|ZP_12154574.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353573042|gb|EHC36503.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353615750|gb|EHC67193.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 59/417 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTAQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLS------NLPDGV 152
Q S++ L + DA LV +DG F+ QNS ++S L V
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVSVRDERQTLAAPV 121
Query: 153 YVGSLLGVSDGIMKRVSDFISEFQCGD------LFWSINGMGAPDLGVIYVP-----AEG 201
+ L +++ + + V+ +I + L G+ +L + AEG
Sbjct: 122 HPEVFLHLTESLAQCVT-YIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHLALAEG 180
Query: 202 NDC-------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 248
+ ++ + L + + ++RH L ++ ++ H + T +
Sbjct: 181 AEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDAS 240
Query: 249 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 306
G + RH+ Q G + L+S + V ++ D +R L+H +GYC R
Sbjct: 241 AFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSR 298
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
QLHK IV+ G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVK
Sbjct: 299 QLHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVK 357
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
CSHGA I +++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 358 CSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|432674714|ref|ZP_19910189.1| FeS cluster assembly protein sufD [Escherichia coli KTE142]
gi|431215587|gb|ELF13273.1| FeS cluster assembly protein sufD [Escherichia coli KTE142]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGQLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|218548733|ref|YP_002382524.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ATCC 35469]
gi|218356274|emb|CAQ88892.1| component of SufBCD complex [Escherichia fergusonii ATCC 35469]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|293414997|ref|ZP_06657640.1| FeS assembly protein SufD [Escherichia coli B185]
gi|291432645|gb|EFF05624.1| FeS assembly protein SufD [Escherichia coli B185]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|432449689|ref|ZP_19691961.1| FeS cluster assembly protein sufD [Escherichia coli KTE193]
gi|433033414|ref|ZP_20221146.1| FeS cluster assembly protein sufD [Escherichia coli KTE112]
gi|430981265|gb|ELC97993.1| FeS cluster assembly protein sufD [Escherichia coli KTE193]
gi|431553404|gb|ELI27330.1| FeS cluster assembly protein sufD [Escherichia coli KTE112]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|422832844|ref|ZP_16880912.1| FeS cluster assembly protein sufD [Escherichia coli E101]
gi|371610860|gb|EHN99387.1| FeS cluster assembly protein sufD [Escherichia coli E101]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|194434787|ref|ZP_03067037.1| FeS assembly protein SufD [Shigella dysenteriae 1012]
gi|416281763|ref|ZP_11646071.1| Iron-sulfur cluster assembly protein SufD [Shigella boydii ATCC
9905]
gi|417672218|ref|ZP_12321691.1| feS assembly protein SufD [Shigella dysenteriae 155-74]
gi|420347333|ref|ZP_14848733.1| feS assembly protein SufD [Shigella boydii 965-58]
gi|194416956|gb|EDX33075.1| FeS assembly protein SufD [Shigella dysenteriae 1012]
gi|320181293|gb|EFW56212.1| Iron-sulfur cluster assembly protein SufD [Shigella boydii ATCC
9905]
gi|332093953|gb|EGI99006.1| feS assembly protein SufD [Shigella dysenteriae 155-74]
gi|391271282|gb|EIQ30157.1| feS assembly protein SufD [Shigella boydii 965-58]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|120437456|ref|YP_863142.1| FeS assembly protein SufD [Gramella forsetii KT0803]
gi|117579606|emb|CAL68075.1| FeS assembly protein SufD [Gramella forsetii KT0803]
Length = 437
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 1/212 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +QN + +A+ I T + Q+ S + S GGKL+R+N++
Sbjct: 211 NSVTEIFADKRAIVDYYKIQNDNASASLIDNTFIEQKDESHVSVHTFSFGGKLTRNNLNF 270
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
Q G ++ + ++ Q D ++ + P Q +K I S VF+G V
Sbjct: 271 YQRGERIDSTMKGVTIIEGKQHVDHNTLVHHIEPNCESHQDYKGIFGDS-STGVFNGKVL 329
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++L + +AT+N KP L+I ADDV CSHG I L+E LFY Q+R
Sbjct: 330 VEKEAQKTNAYQSNNNILADDKATINSKPQLEIFADDVACSHGCTIGQLDEDALFYMQSR 389
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
GI + AR ++++F V+E P ++ ++
Sbjct: 390 GIPRKEARGLMMYAFANNVLESVKIPEVKKRI 421
>gi|417628796|ref|ZP_12279036.1| feS assembly protein SufD [Escherichia coli STEC_MHI813]
gi|345374010|gb|EGX05963.1| feS assembly protein SufD [Escherichia coli STEC_MHI813]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|46199791|ref|YP_005458.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|55981809|ref|YP_145106.1| SufD protein membrane protein [Thermus thermophilus HB8]
gi|46197418|gb|AAS81831.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|55773222|dbj|BAD71663.1| SufD protein (membrane protein) [Thermus thermophilus HB8]
Length = 431
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 178/415 (42%), Gaps = 65/415 (15%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P L + R + + P+PS+KDE +R+TD S + +
Sbjct: 13 SKALGEPAWLLEKRLKALEAFARLPYPSKKDENWRYTDLSEAPLELPVEAPKGLRLSRDD 72
Query: 109 QIQPITRPSSSLDVS----------TDAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSL 157
+P+ R DVS A+ P + G + S A L PD V
Sbjct: 73 LPEPVKRRLERTDVSGFLVFVGPDLVYAEVPEALKEKGLVFTSLAEALKTHPDKVEAALF 132
Query: 158 LGV--SDGIMKRVSDFISEFQCGDLFWSINGMGAPD-LGVIYVPAEGNDCYWANSVL--- 211
V D + S F F G + G+ LGV V EG S+L
Sbjct: 133 QAVYTEDKFAAQNSAF---FTHGAFLYVPAGLEVEKPLGVFKVLLEGEKASAGRSLLFLE 189
Query: 212 -------------------------EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
E+V+ G ++RH+++Q H E
Sbjct: 190 DNAKAAYIEEYLSLDLPPTLHLSATEMVLRPGARLRHAHVQTFGEGVWHFHRQRALLERD 249
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 306
SG + V+ GG +R V + +GP E+E+ + Q D ++ L H + R
Sbjct: 250 SGLNDLVVNLGGAYARSEVASELVGPGAESEMLGLYFGHGRQQFDHYT--LQHHVEHHTR 307
Query: 307 Q--LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
L+K V +AVF G +++ + AQ+TDA Q R+LLL P A V+ P L+I A+D
Sbjct: 308 SDLLYKGAVKDE-ARAVFSGLIRLEKGAQKTDAYQANRNLLLSPTARVDSIPQLEIGAND 366
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
V+C+HG+ + ++E QLFY Q+RG+ A++ LV + A+V+ R P ++R +
Sbjct: 367 VRCTHGSTTAPVDEMQLFYLQSRGLPRGLAQELLVKAHLADVLSRIPLKALRAHI 421
>gi|331653081|ref|ZP_08354086.1| FeS assembly protein SufD [Escherichia coli M718]
gi|331049179|gb|EGI21251.1| FeS assembly protein SufD [Escherichia coli M718]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|418996783|ref|ZP_13544383.1| feS assembly protein SufD [Escherichia coli DEC1A]
gi|377845400|gb|EHU10422.1| feS assembly protein SufD [Escherichia coli DEC1A]
Length = 407
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 233 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 290
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 291 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 349
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 350 RIDNEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 398
>gi|238910812|ref|ZP_04654649.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E S++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSSLKQQVLARI 414
>gi|417342133|ref|ZP_12123019.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|357957017|gb|EHJ82215.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 59/417 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLS------NLPDGV 152
Q S++ L + DA LV +DG F+ QNS ++S L V
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVSVRDERQTLAAPV 121
Query: 153 YVGSLLGVSDGIMKRVSDFISEFQCGD------LFWSINGMGAPDLGVIYVP-----AEG 201
+ L +++ + + V+ +I + L G+ +L + AEG
Sbjct: 122 HPEVFLHLTESLAQCVT-YIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHLALAEG 180
Query: 202 NDC-------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 248
+ ++ + L + + ++RH L ++ ++ H + T +
Sbjct: 181 AEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDAS 240
Query: 249 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 306
G + RH+ Q G + L+S + V ++ D +R L+H +GYC R
Sbjct: 241 AFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSR 298
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
QLHK IV+ G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVK
Sbjct: 299 QLHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVK 357
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
CSHGA I +++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 358 CSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|432680258|ref|ZP_19915635.1| FeS cluster assembly protein sufD [Escherichia coli KTE143]
gi|431221188|gb|ELF18509.1| FeS cluster assembly protein sufD [Escherichia coli KTE143]
Length = 340
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 166 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 223
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 224 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 282
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 283 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 331
>gi|300904532|ref|ZP_07122371.1| FeS assembly protein SufD [Escherichia coli MS 84-1]
gi|301303196|ref|ZP_07209322.1| FeS assembly protein SufD [Escherichia coli MS 124-1]
gi|415861413|ref|ZP_11535079.1| FeS assembly protein SufD [Escherichia coli MS 85-1]
gi|300403526|gb|EFJ87064.1| FeS assembly protein SufD [Escherichia coli MS 84-1]
gi|300841605|gb|EFK69365.1| FeS assembly protein SufD [Escherichia coli MS 124-1]
gi|315257516|gb|EFU37484.1| FeS assembly protein SufD [Escherichia coli MS 85-1]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|365106827|ref|ZP_09335240.1| FeS cluster assembly protein sufD [Citrobacter freundii 4_7_47CFAA]
gi|363641811|gb|EHL81186.1| FeS cluster assembly protein sufD [Citrobacter freundii 4_7_47CFAA]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G +T L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GDAVLRHNTSTQLNGENTTLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI + A+ ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGIGQQDAQHMILYAFAAELTEALGDETLKQQVLARI 414
>gi|387506925|ref|YP_006159181.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. RM12579]
gi|419126234|ref|ZP_13671123.1| feS assembly protein SufD [Escherichia coli DEC5C]
gi|419131607|ref|ZP_13676448.1| feS assembly protein SufD [Escherichia coli DEC5D]
gi|209769184|gb|ACI82904.1| hypothetical protein ECs2388 [Escherichia coli]
gi|374358919|gb|AEZ40626.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. RM12579]
gi|377976289|gb|EHV39600.1| feS assembly protein SufD [Escherichia coli DEC5C]
gi|377977010|gb|EHV40311.1| feS assembly protein SufD [Escherichia coli DEC5D]
Length = 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLTRI 414
>gi|429110025|ref|ZP_19171795.1| Iron-sulfur cluster assembly protein SufD [Cronobacter malonaticus
507]
gi|426311182|emb|CCJ97908.1| Iron-sulfur cluster assembly protein SufD [Cronobacter malonaticus
507]
Length = 424
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 250 GAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G +KV + A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 RDKGRAVFNGLIKVAQQAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 367 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 415
>gi|15802093|ref|NP_288115.1| cysteine desulfurase [Escherichia coli O157:H7 str. EDL933]
gi|15831642|ref|NP_310415.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. Sakai]
gi|168751908|ref|ZP_02776930.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4113]
gi|168756679|ref|ZP_02781686.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4401]
gi|168762258|ref|ZP_02787265.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4501]
gi|168770440|ref|ZP_02795447.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4486]
gi|168775022|ref|ZP_02800029.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4196]
gi|168782093|ref|ZP_02807100.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4076]
gi|168789815|ref|ZP_02814822.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC869]
gi|168800141|ref|ZP_02825148.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC508]
gi|195937365|ref|ZP_03082747.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. EC4024]
gi|208810501|ref|ZP_03252377.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4206]
gi|208816538|ref|ZP_03257658.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4045]
gi|208821635|ref|ZP_03261955.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4042]
gi|209397107|ref|YP_002270750.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. EC4115]
gi|217329028|ref|ZP_03445109.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. TW14588]
gi|254793298|ref|YP_003078135.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. TW14359]
gi|261227874|ref|ZP_05942155.1| component of SufBCD complex [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258392|ref|ZP_05950925.1| component of SufBCD complex [Escherichia coli O157:H7 str. FRIK966]
gi|291282811|ref|YP_003499629.1| FeS assembly protein SufD [Escherichia coli O55:H7 str. CB9615]
gi|387882785|ref|YP_006313087.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli Xuzhou21]
gi|416312181|ref|ZP_11657382.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1044]
gi|416322896|ref|ZP_11664505.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. EC1212]
gi|416327153|ref|ZP_11667160.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1125]
gi|416773514|ref|ZP_11873721.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. G5101]
gi|416785322|ref|ZP_11878618.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. 493-89]
gi|416796314|ref|ZP_11883533.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. H 2687]
gi|416818175|ref|ZP_11892875.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. 3256-97]
gi|416827288|ref|ZP_11897453.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. USDA 5905]
gi|419045723|ref|ZP_13592669.1| feS assembly protein SufD [Escherichia coli DEC3A]
gi|419051204|ref|ZP_13598085.1| feS assembly protein SufD [Escherichia coli DEC3B]
gi|419057200|ref|ZP_13604015.1| feS assembly protein SufD [Escherichia coli DEC3C]
gi|419062579|ref|ZP_13609318.1| feS assembly protein SufD [Escherichia coli DEC3D]
gi|419069487|ref|ZP_13615123.1| feS assembly protein SufD [Escherichia coli DEC3E]
gi|419075587|ref|ZP_13621119.1| feS assembly protein SufD [Escherichia coli DEC3F]
gi|419080718|ref|ZP_13626175.1| feS assembly protein SufD [Escherichia coli DEC4A]
gi|419086352|ref|ZP_13631722.1| feS assembly protein SufD [Escherichia coli DEC4B]
gi|419092723|ref|ZP_13638016.1| feS assembly protein SufD [Escherichia coli DEC4C]
gi|419098530|ref|ZP_13643743.1| feS assembly protein SufD [Escherichia coli DEC4D]
gi|419103978|ref|ZP_13649119.1| feS assembly protein SufD [Escherichia coli DEC4E]
gi|419109530|ref|ZP_13654597.1| feS assembly protein SufD [Escherichia coli DEC4F]
gi|419114814|ref|ZP_13659836.1| feS assembly protein SufD [Escherichia coli DEC5A]
gi|419120437|ref|ZP_13665403.1| feS assembly protein SufD [Escherichia coli DEC5B]
gi|419136425|ref|ZP_13681226.1| feS assembly protein SufD [Escherichia coli DEC5E]
gi|420269530|ref|ZP_14771903.1| feS assembly protein SufD [Escherichia coli PA22]
gi|420280651|ref|ZP_14782898.1| feS assembly protein SufD [Escherichia coli TW06591]
gi|420286762|ref|ZP_14788959.1| feS assembly protein SufD [Escherichia coli TW10246]
gi|420292412|ref|ZP_14794544.1| feS assembly protein SufD [Escherichia coli TW11039]
gi|420298199|ref|ZP_14800262.1| feS assembly protein SufD [Escherichia coli TW09109]
gi|420304208|ref|ZP_14806215.1| feS assembly protein SufD [Escherichia coli TW10119]
gi|420309612|ref|ZP_14811556.1| feS assembly protein SufD [Escherichia coli EC1738]
gi|420315128|ref|ZP_14817011.1| feS assembly protein SufD [Escherichia coli EC1734]
gi|421818378|ref|ZP_16253891.1| feS assembly protein SufD [Escherichia coli 10.0821]
gi|421823949|ref|ZP_16259344.1| feS assembly protein SufD [Escherichia coli FRIK920]
gi|421830890|ref|ZP_16266188.1| feS assembly protein SufD [Escherichia coli PA7]
gi|423710832|ref|ZP_17685165.1| feS assembly protein SufD [Escherichia coli PA31]
gi|424077509|ref|ZP_17814564.1| feS assembly protein SufD [Escherichia coli FDA505]
gi|424083883|ref|ZP_17820445.1| feS assembly protein SufD [Escherichia coli FDA517]
gi|424090288|ref|ZP_17826318.1| feS assembly protein SufD [Escherichia coli FRIK1996]
gi|424096826|ref|ZP_17832249.1| feS assembly protein SufD [Escherichia coli FRIK1985]
gi|424103166|ref|ZP_17838043.1| feS assembly protein SufD [Escherichia coli FRIK1990]
gi|424109889|ref|ZP_17844209.1| feS assembly protein SufD [Escherichia coli 93-001]
gi|424121965|ref|ZP_17855379.1| feS assembly protein SufD [Escherichia coli PA5]
gi|424128077|ref|ZP_17861055.1| feS assembly protein SufD [Escherichia coli PA9]
gi|424134229|ref|ZP_17866776.1| feS assembly protein SufD [Escherichia coli PA10]
gi|424140918|ref|ZP_17872897.1| feS assembly protein SufD [Escherichia coli PA14]
gi|424147343|ref|ZP_17878806.1| feS assembly protein SufD [Escherichia coli PA15]
gi|424153281|ref|ZP_17884297.1| feS assembly protein SufD [Escherichia coli PA24]
gi|424235458|ref|ZP_17889749.1| feS assembly protein SufD [Escherichia coli PA25]
gi|424449702|ref|ZP_17901478.1| feS assembly protein SufD [Escherichia coli PA32]
gi|424455872|ref|ZP_17907101.1| feS assembly protein SufD [Escherichia coli PA33]
gi|424462171|ref|ZP_17912751.1| feS assembly protein SufD [Escherichia coli PA39]
gi|424468575|ref|ZP_17918490.1| feS assembly protein SufD [Escherichia coli PA41]
gi|424475158|ref|ZP_17924569.1| feS assembly protein SufD [Escherichia coli PA42]
gi|424480906|ref|ZP_17929948.1| feS assembly protein SufD [Escherichia coli TW07945]
gi|424487086|ref|ZP_17935714.1| feS assembly protein SufD [Escherichia coli TW09098]
gi|424493455|ref|ZP_17941383.1| feS assembly protein SufD [Escherichia coli TW09195]
gi|424500348|ref|ZP_17947349.1| feS assembly protein SufD [Escherichia coli EC4203]
gi|424506502|ref|ZP_17953016.1| feS assembly protein SufD [Escherichia coli EC4196]
gi|424520279|ref|ZP_17964474.1| feS assembly protein SufD [Escherichia coli TW14301]
gi|424526188|ref|ZP_17969973.1| feS assembly protein SufD [Escherichia coli EC4421]
gi|424544320|ref|ZP_17986846.1| feS assembly protein SufD [Escherichia coli EC4402]
gi|424550587|ref|ZP_17992535.1| feS assembly protein SufD [Escherichia coli EC4439]
gi|424556835|ref|ZP_17998313.1| feS assembly protein SufD [Escherichia coli EC4436]
gi|424563180|ref|ZP_18004239.1| feS assembly protein SufD [Escherichia coli EC4437]
gi|424569252|ref|ZP_18009904.1| feS assembly protein SufD [Escherichia coli EC4448]
gi|424575382|ref|ZP_18015556.1| feS assembly protein SufD [Escherichia coli EC1845]
gi|424581239|ref|ZP_18020961.1| feS assembly protein SufD [Escherichia coli EC1863]
gi|425098086|ref|ZP_18500881.1| feS assembly protein SufD [Escherichia coli 3.4870]
gi|425104264|ref|ZP_18506630.1| feS assembly protein SufD [Escherichia coli 5.2239]
gi|425110093|ref|ZP_18512091.1| feS assembly protein SufD [Escherichia coli 6.0172]
gi|425125882|ref|ZP_18527147.1| feS assembly protein SufD [Escherichia coli 8.0586]
gi|425131728|ref|ZP_18532633.1| feS assembly protein SufD [Escherichia coli 8.2524]
gi|425138109|ref|ZP_18538579.1| feS assembly protein SufD [Escherichia coli 10.0833]
gi|425144068|ref|ZP_18544129.1| feS assembly protein SufD [Escherichia coli 10.0869]
gi|425150137|ref|ZP_18549819.1| feS assembly protein SufD [Escherichia coli 88.0221]
gi|425155980|ref|ZP_18555308.1| feS assembly protein SufD [Escherichia coli PA34]
gi|425162489|ref|ZP_18561429.1| feS assembly protein SufD [Escherichia coli FDA506]
gi|425168164|ref|ZP_18566711.1| feS assembly protein SufD [Escherichia coli FDA507]
gi|425174255|ref|ZP_18572427.1| feS assembly protein SufD [Escherichia coli FDA504]
gi|425180196|ref|ZP_18577978.1| feS assembly protein SufD [Escherichia coli FRIK1999]
gi|425186424|ref|ZP_18583785.1| feS assembly protein SufD [Escherichia coli FRIK1997]
gi|425193301|ref|ZP_18590151.1| feS assembly protein SufD [Escherichia coli NE1487]
gi|425199691|ref|ZP_18596009.1| feS assembly protein SufD [Escherichia coli NE037]
gi|425206140|ref|ZP_18602021.1| feS assembly protein SufD [Escherichia coli FRIK2001]
gi|425211876|ref|ZP_18607362.1| feS assembly protein SufD [Escherichia coli PA4]
gi|425218004|ref|ZP_18613050.1| feS assembly protein SufD [Escherichia coli PA23]
gi|425224519|ref|ZP_18619083.1| feS assembly protein SufD [Escherichia coli PA49]
gi|425230753|ref|ZP_18624882.1| feS assembly protein SufD [Escherichia coli PA45]
gi|425236904|ref|ZP_18630664.1| feS assembly protein SufD [Escherichia coli TT12B]
gi|425242967|ref|ZP_18636348.1| feS assembly protein SufD [Escherichia coli MA6]
gi|425249128|ref|ZP_18642124.1| feS assembly protein SufD [Escherichia coli 5905]
gi|425254896|ref|ZP_18647490.1| feS assembly protein SufD [Escherichia coli CB7326]
gi|425261191|ref|ZP_18653279.1| feS assembly protein SufD [Escherichia coli EC96038]
gi|425267227|ref|ZP_18658912.1| feS assembly protein SufD [Escherichia coli 5412]
gi|425294682|ref|ZP_18684969.1| feS assembly protein SufD [Escherichia coli PA38]
gi|425311374|ref|ZP_18700620.1| feS assembly protein SufD [Escherichia coli EC1735]
gi|425317299|ref|ZP_18706153.1| feS assembly protein SufD [Escherichia coli EC1736]
gi|425323403|ref|ZP_18711837.1| feS assembly protein SufD [Escherichia coli EC1737]
gi|425329564|ref|ZP_18717534.1| feS assembly protein SufD [Escherichia coli EC1846]
gi|425335731|ref|ZP_18723222.1| feS assembly protein SufD [Escherichia coli EC1847]
gi|425342158|ref|ZP_18729139.1| feS assembly protein SufD [Escherichia coli EC1848]
gi|425347970|ref|ZP_18734543.1| feS assembly protein SufD [Escherichia coli EC1849]
gi|425354271|ref|ZP_18740417.1| feS assembly protein SufD [Escherichia coli EC1850]
gi|425360241|ref|ZP_18745975.1| feS assembly protein SufD [Escherichia coli EC1856]
gi|425366366|ref|ZP_18751655.1| feS assembly protein SufD [Escherichia coli EC1862]
gi|425372790|ref|ZP_18757525.1| feS assembly protein SufD [Escherichia coli EC1864]
gi|425385614|ref|ZP_18769262.1| feS assembly protein SufD [Escherichia coli EC1866]
gi|425392305|ref|ZP_18775504.1| feS assembly protein SufD [Escherichia coli EC1868]
gi|425398460|ref|ZP_18781249.1| feS assembly protein SufD [Escherichia coli EC1869]
gi|425404492|ref|ZP_18786823.1| feS assembly protein SufD [Escherichia coli EC1870]
gi|425411065|ref|ZP_18792909.1| feS assembly protein SufD [Escherichia coli NE098]
gi|425417372|ref|ZP_18798718.1| feS assembly protein SufD [Escherichia coli FRIK523]
gi|425428628|ref|ZP_18809323.1| feS assembly protein SufD [Escherichia coli 0.1304]
gi|428946973|ref|ZP_19019362.1| feS assembly protein SufD [Escherichia coli 88.1467]
gi|428953223|ref|ZP_19025073.1| feS assembly protein SufD [Escherichia coli 88.1042]
gi|428959145|ref|ZP_19030526.1| feS assembly protein SufD [Escherichia coli 89.0511]
gi|428965598|ref|ZP_19036455.1| feS assembly protein SufD [Escherichia coli 90.0091]
gi|428971399|ref|ZP_19041820.1| feS assembly protein SufD [Escherichia coli 90.0039]
gi|428978008|ref|ZP_19047898.1| feS assembly protein SufD [Escherichia coli 90.2281]
gi|428983709|ref|ZP_19053166.1| feS assembly protein SufD [Escherichia coli 93.0055]
gi|429001847|ref|ZP_19070091.1| feS assembly protein SufD [Escherichia coli 95.0183]
gi|429008111|ref|ZP_19075717.1| feS assembly protein SufD [Escherichia coli 95.1288]
gi|429014600|ref|ZP_19081570.1| feS assembly protein SufD [Escherichia coli 95.0943]
gi|429020569|ref|ZP_19087145.1| feS assembly protein SufD [Escherichia coli 96.0428]
gi|429026512|ref|ZP_19092608.1| feS assembly protein SufD [Escherichia coli 96.0427]
gi|429032590|ref|ZP_19098198.1| feS assembly protein SufD [Escherichia coli 96.0939]
gi|429038736|ref|ZP_19103927.1| feS assembly protein SufD [Escherichia coli 96.0932]
gi|429044813|ref|ZP_19109581.1| feS assembly protein SufD [Escherichia coli 96.0107]
gi|429050183|ref|ZP_19114786.1| feS assembly protein SufD [Escherichia coli 97.0003]
gi|429055443|ref|ZP_19119847.1| feS assembly protein SufD [Escherichia coli 97.1742]
gi|429061094|ref|ZP_19125164.1| feS assembly protein SufD [Escherichia coli 97.0007]
gi|429067192|ref|ZP_19130739.1| feS assembly protein SufD [Escherichia coli 99.0672]
gi|429073194|ref|ZP_19136486.1| feS assembly protein SufD [Escherichia coli 99.0678]
gi|429078521|ref|ZP_19141686.1| feS assembly protein SufD [Escherichia coli 99.0713]
gi|429832712|ref|ZP_19363195.1| feS assembly protein SufD [Escherichia coli 97.0010]
gi|444930734|ref|ZP_21249820.1| feS assembly protein SufD [Escherichia coli 99.0814]
gi|444936021|ref|ZP_21254863.1| feS assembly protein SufD [Escherichia coli 99.0815]
gi|444941661|ref|ZP_21260235.1| feS assembly protein SufD [Escherichia coli 99.0816]
gi|444947299|ref|ZP_21265655.1| feS assembly protein SufD [Escherichia coli 99.0839]
gi|444952850|ref|ZP_21270992.1| feS assembly protein SufD [Escherichia coli 99.0848]
gi|444958349|ref|ZP_21276253.1| feS assembly protein SufD [Escherichia coli 99.1753]
gi|444963593|ref|ZP_21281257.1| feS assembly protein SufD [Escherichia coli 99.1775]
gi|444969405|ref|ZP_21286812.1| feS assembly protein SufD [Escherichia coli 99.1793]
gi|444974747|ref|ZP_21291932.1| feS assembly protein SufD [Escherichia coli 99.1805]
gi|444980239|ref|ZP_21297183.1| feS assembly protein SufD [Escherichia coli ATCC 700728]
gi|444985559|ref|ZP_21302375.1| feS assembly protein SufD [Escherichia coli PA11]
gi|444990847|ref|ZP_21307530.1| feS assembly protein SufD [Escherichia coli PA19]
gi|444996050|ref|ZP_21312589.1| feS assembly protein SufD [Escherichia coli PA13]
gi|445001675|ref|ZP_21318095.1| feS assembly protein SufD [Escherichia coli PA2]
gi|445007132|ref|ZP_21323417.1| feS assembly protein SufD [Escherichia coli PA47]
gi|445012264|ref|ZP_21328405.1| feS assembly protein SufD [Escherichia coli PA48]
gi|445018000|ref|ZP_21333996.1| feS assembly protein SufD [Escherichia coli PA8]
gi|445023647|ref|ZP_21339507.1| feS assembly protein SufD [Escherichia coli 7.1982]
gi|445028887|ref|ZP_21344602.1| feS assembly protein SufD [Escherichia coli 99.1781]
gi|445034335|ref|ZP_21349898.1| feS assembly protein SufD [Escherichia coli 99.1762]
gi|445040040|ref|ZP_21355447.1| feS assembly protein SufD [Escherichia coli PA35]
gi|445045172|ref|ZP_21360464.1| feS assembly protein SufD [Escherichia coli 3.4880]
gi|445050794|ref|ZP_21365890.1| feS assembly protein SufD [Escherichia coli 95.0083]
gi|445056577|ref|ZP_21371467.1| feS assembly protein SufD [Escherichia coli 99.0670]
gi|452971118|ref|ZP_21969345.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. EC4009]
gi|12515683|gb|AAG56668.1|AE005391_5 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13361855|dbj|BAB35811.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187769397|gb|EDU33241.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4196]
gi|188014123|gb|EDU52245.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4113]
gi|189000349|gb|EDU69335.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4076]
gi|189356214|gb|EDU74633.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4401]
gi|189360642|gb|EDU79061.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4486]
gi|189367525|gb|EDU85941.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4501]
gi|189370617|gb|EDU89033.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC869]
gi|189377610|gb|EDU96026.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC508]
gi|208725017|gb|EDZ74724.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4206]
gi|208730881|gb|EDZ79570.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4045]
gi|208741758|gb|EDZ89440.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4042]
gi|209158507|gb|ACI35940.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4115]
gi|209769178|gb|ACI82901.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769180|gb|ACI82902.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769182|gb|ACI82903.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769186|gb|ACI82905.1| hypothetical protein ECs2388 [Escherichia coli]
gi|217318375|gb|EEC26802.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. TW14588]
gi|254592698|gb|ACT72059.1| component of SufBCD complex [Escherichia coli O157:H7 str. TW14359]
gi|290762684|gb|ADD56645.1| FeS assembly protein SufD [Escherichia coli O55:H7 str. CB9615]
gi|320188369|gb|EFW63031.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. EC1212]
gi|320641896|gb|EFX11264.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. G5101]
gi|320647352|gb|EFX16160.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. 493-89]
gi|320652646|gb|EFX20915.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. H 2687]
gi|320653031|gb|EFX21227.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320658715|gb|EFX26392.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. USDA 5905]
gi|326342048|gb|EGD65829.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1044]
gi|326343600|gb|EGD67362.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1125]
gi|377895320|gb|EHU59733.1| feS assembly protein SufD [Escherichia coli DEC3A]
gi|377895528|gb|EHU59939.1| feS assembly protein SufD [Escherichia coli DEC3B]
gi|377906481|gb|EHU70723.1| feS assembly protein SufD [Escherichia coli DEC3C]
gi|377911816|gb|EHU75981.1| feS assembly protein SufD [Escherichia coli DEC3D]
gi|377914545|gb|EHU78667.1| feS assembly protein SufD [Escherichia coli DEC3E]
gi|377923858|gb|EHU87819.1| feS assembly protein SufD [Escherichia coli DEC3F]
gi|377928200|gb|EHU92111.1| feS assembly protein SufD [Escherichia coli DEC4A]
gi|377932772|gb|EHU96618.1| feS assembly protein SufD [Escherichia coli DEC4B]
gi|377944012|gb|EHV07721.1| feS assembly protein SufD [Escherichia coli DEC4C]
gi|377944846|gb|EHV08548.1| feS assembly protein SufD [Escherichia coli DEC4D]
gi|377949791|gb|EHV13422.1| feS assembly protein SufD [Escherichia coli DEC4E]
gi|377958737|gb|EHV22249.1| feS assembly protein SufD [Escherichia coli DEC4F]
gi|377962019|gb|EHV25482.1| feS assembly protein SufD [Escherichia coli DEC5A]
gi|377968644|gb|EHV32035.1| feS assembly protein SufD [Escherichia coli DEC5B]
gi|377985613|gb|EHV48825.1| feS assembly protein SufD [Escherichia coli DEC5E]
gi|386796243|gb|AFJ29277.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli Xuzhou21]
gi|390645463|gb|EIN24640.1| feS assembly protein SufD [Escherichia coli FDA517]
gi|390645634|gb|EIN24806.1| feS assembly protein SufD [Escherichia coli FRIK1996]
gi|390646175|gb|EIN25301.1| feS assembly protein SufD [Escherichia coli FDA505]
gi|390663772|gb|EIN41258.1| feS assembly protein SufD [Escherichia coli 93-001]
gi|390665238|gb|EIN42549.1| feS assembly protein SufD [Escherichia coli FRIK1985]
gi|390666198|gb|EIN43394.1| feS assembly protein SufD [Escherichia coli FRIK1990]
gi|390684834|gb|EIN60438.1| feS assembly protein SufD [Escherichia coli PA5]
gi|390685846|gb|EIN61301.1| feS assembly protein SufD [Escherichia coli PA9]
gi|390701995|gb|EIN76212.1| feS assembly protein SufD [Escherichia coli PA10]
gi|390703146|gb|EIN77185.1| feS assembly protein SufD [Escherichia coli PA15]
gi|390703940|gb|EIN77930.1| feS assembly protein SufD [Escherichia coli PA14]
gi|390715732|gb|EIN88568.1| feS assembly protein SufD [Escherichia coli PA22]
gi|390727116|gb|EIN99536.1| feS assembly protein SufD [Escherichia coli PA25]
gi|390727511|gb|EIN99919.1| feS assembly protein SufD [Escherichia coli PA24]
gi|390745253|gb|EIO16060.1| feS assembly protein SufD [Escherichia coli PA32]
gi|390746225|gb|EIO16984.1| feS assembly protein SufD [Escherichia coli PA31]
gi|390747779|gb|EIO18324.1| feS assembly protein SufD [Escherichia coli PA33]
gi|390770079|gb|EIO38968.1| feS assembly protein SufD [Escherichia coli PA41]
gi|390771868|gb|EIO40521.1| feS assembly protein SufD [Escherichia coli PA39]
gi|390771946|gb|EIO40593.1| feS assembly protein SufD [Escherichia coli PA42]
gi|390782592|gb|EIO50226.1| feS assembly protein SufD [Escherichia coli TW06591]
gi|390790942|gb|EIO58337.1| feS assembly protein SufD [Escherichia coli TW10246]
gi|390797034|gb|EIO64300.1| feS assembly protein SufD [Escherichia coli TW07945]
gi|390798211|gb|EIO65407.1| feS assembly protein SufD [Escherichia coli TW11039]
gi|390808389|gb|EIO75228.1| feS assembly protein SufD [Escherichia coli TW09109]
gi|390809930|gb|EIO76706.1| feS assembly protein SufD [Escherichia coli TW09098]
gi|390816894|gb|EIO83354.1| feS assembly protein SufD [Escherichia coli TW10119]
gi|390829611|gb|EIO95211.1| feS assembly protein SufD [Escherichia coli EC4203]
gi|390832807|gb|EIO98013.1| feS assembly protein SufD [Escherichia coli TW09195]
gi|390834252|gb|EIO99218.1| feS assembly protein SufD [Escherichia coli EC4196]
gi|390849306|gb|EIP12747.1| feS assembly protein SufD [Escherichia coli TW14301]
gi|390852503|gb|EIP15663.1| feS assembly protein SufD [Escherichia coli EC4421]
gi|390873873|gb|EIP35043.1| feS assembly protein SufD [Escherichia coli EC4402]
gi|390880858|gb|EIP41526.1| feS assembly protein SufD [Escherichia coli EC4439]
gi|390885348|gb|EIP45588.1| feS assembly protein SufD [Escherichia coli EC4436]
gi|390896875|gb|EIP56255.1| feS assembly protein SufD [Escherichia coli EC4437]
gi|390900784|gb|EIP59996.1| feS assembly protein SufD [Escherichia coli EC4448]
gi|390901059|gb|EIP60243.1| feS assembly protein SufD [Escherichia coli EC1738]
gi|390908829|gb|EIP67630.1| feS assembly protein SufD [Escherichia coli EC1734]
gi|390921050|gb|EIP79273.1| feS assembly protein SufD [Escherichia coli EC1863]
gi|390922322|gb|EIP80421.1| feS assembly protein SufD [Escherichia coli EC1845]
gi|408066932|gb|EKH01375.1| feS assembly protein SufD [Escherichia coli PA7]
gi|408071337|gb|EKH05689.1| feS assembly protein SufD [Escherichia coli FRIK920]
gi|408076597|gb|EKH10819.1| feS assembly protein SufD [Escherichia coli PA34]
gi|408082269|gb|EKH16256.1| feS assembly protein SufD [Escherichia coli FDA506]
gi|408084674|gb|EKH18437.1| feS assembly protein SufD [Escherichia coli FDA507]
gi|408093470|gb|EKH26559.1| feS assembly protein SufD [Escherichia coli FDA504]
gi|408099331|gb|EKH31980.1| feS assembly protein SufD [Escherichia coli FRIK1999]
gi|408107361|gb|EKH39444.1| feS assembly protein SufD [Escherichia coli FRIK1997]
gi|408110941|gb|EKH42720.1| feS assembly protein SufD [Escherichia coli NE1487]
gi|408117834|gb|EKH49008.1| feS assembly protein SufD [Escherichia coli NE037]
gi|408123800|gb|EKH54529.1| feS assembly protein SufD [Escherichia coli FRIK2001]
gi|408129546|gb|EKH59765.1| feS assembly protein SufD [Escherichia coli PA4]
gi|408140849|gb|EKH70329.1| feS assembly protein SufD [Escherichia coli PA23]
gi|408142906|gb|EKH72250.1| feS assembly protein SufD [Escherichia coli PA49]
gi|408148155|gb|EKH77059.1| feS assembly protein SufD [Escherichia coli PA45]
gi|408156324|gb|EKH84527.1| feS assembly protein SufD [Escherichia coli TT12B]
gi|408163542|gb|EKH91405.1| feS assembly protein SufD [Escherichia coli MA6]
gi|408165549|gb|EKH93226.1| feS assembly protein SufD [Escherichia coli 5905]
gi|408176984|gb|EKI03811.1| feS assembly protein SufD [Escherichia coli CB7326]
gi|408183772|gb|EKI10194.1| feS assembly protein SufD [Escherichia coli EC96038]
gi|408184673|gb|EKI10990.1| feS assembly protein SufD [Escherichia coli 5412]
gi|408220629|gb|EKI44669.1| feS assembly protein SufD [Escherichia coli PA38]
gi|408229969|gb|EKI53392.1| feS assembly protein SufD [Escherichia coli EC1735]
gi|408241609|gb|EKI64255.1| feS assembly protein SufD [Escherichia coli EC1736]
gi|408245405|gb|EKI67793.1| feS assembly protein SufD [Escherichia coli EC1737]
gi|408249871|gb|EKI71780.1| feS assembly protein SufD [Escherichia coli EC1846]
gi|408260246|gb|EKI81375.1| feS assembly protein SufD [Escherichia coli EC1847]
gi|408262369|gb|EKI83318.1| feS assembly protein SufD [Escherichia coli EC1848]
gi|408267886|gb|EKI88322.1| feS assembly protein SufD [Escherichia coli EC1849]
gi|408277900|gb|EKI97680.1| feS assembly protein SufD [Escherichia coli EC1850]
gi|408280092|gb|EKI99672.1| feS assembly protein SufD [Escherichia coli EC1856]
gi|408291706|gb|EKJ10290.1| feS assembly protein SufD [Escherichia coli EC1862]
gi|408293706|gb|EKJ12127.1| feS assembly protein SufD [Escherichia coli EC1864]
gi|408310653|gb|EKJ27694.1| feS assembly protein SufD [Escherichia coli EC1868]
gi|408311179|gb|EKJ28189.1| feS assembly protein SufD [Escherichia coli EC1866]
gi|408323420|gb|EKJ39382.1| feS assembly protein SufD [Escherichia coli EC1869]
gi|408328354|gb|EKJ43964.1| feS assembly protein SufD [Escherichia coli NE098]
gi|408328799|gb|EKJ44338.1| feS assembly protein SufD [Escherichia coli EC1870]
gi|408339276|gb|EKJ53888.1| feS assembly protein SufD [Escherichia coli FRIK523]
gi|408348894|gb|EKJ62972.1| feS assembly protein SufD [Escherichia coli 0.1304]
gi|408552041|gb|EKK29273.1| feS assembly protein SufD [Escherichia coli 5.2239]
gi|408552803|gb|EKK29966.1| feS assembly protein SufD [Escherichia coli 3.4870]
gi|408553346|gb|EKK30467.1| feS assembly protein SufD [Escherichia coli 6.0172]
gi|408574531|gb|EKK50300.1| feS assembly protein SufD [Escherichia coli 8.0586]
gi|408582759|gb|EKK57968.1| feS assembly protein SufD [Escherichia coli 10.0833]
gi|408583399|gb|EKK58567.1| feS assembly protein SufD [Escherichia coli 8.2524]
gi|408594529|gb|EKK68810.1| feS assembly protein SufD [Escherichia coli 10.0869]
gi|408598498|gb|EKK72453.1| feS assembly protein SufD [Escherichia coli 88.0221]
gi|408614025|gb|EKK87309.1| feS assembly protein SufD [Escherichia coli 10.0821]
gi|427207811|gb|EKV77973.1| feS assembly protein SufD [Escherichia coli 88.1042]
gi|427209551|gb|EKV79581.1| feS assembly protein SufD [Escherichia coli 89.0511]
gi|427210898|gb|EKV80744.1| feS assembly protein SufD [Escherichia coli 88.1467]
gi|427226487|gb|EKV95076.1| feS assembly protein SufD [Escherichia coli 90.0091]
gi|427226793|gb|EKV95377.1| feS assembly protein SufD [Escherichia coli 90.2281]
gi|427229844|gb|EKV98146.1| feS assembly protein SufD [Escherichia coli 90.0039]
gi|427245679|gb|EKW12954.1| feS assembly protein SufD [Escherichia coli 93.0055]
gi|427263791|gb|EKW29542.1| feS assembly protein SufD [Escherichia coli 95.0943]
gi|427264642|gb|EKW30313.1| feS assembly protein SufD [Escherichia coli 95.0183]
gi|427266520|gb|EKW31953.1| feS assembly protein SufD [Escherichia coli 95.1288]
gi|427279192|gb|EKW43643.1| feS assembly protein SufD [Escherichia coli 96.0428]
gi|427282866|gb|EKW47107.1| feS assembly protein SufD [Escherichia coli 96.0427]
gi|427285425|gb|EKW49409.1| feS assembly protein SufD [Escherichia coli 96.0939]
gi|427294475|gb|EKW57654.1| feS assembly protein SufD [Escherichia coli 96.0932]
gi|427301787|gb|EKW64642.1| feS assembly protein SufD [Escherichia coli 96.0107]
gi|427302088|gb|EKW64924.1| feS assembly protein SufD [Escherichia coli 97.0003]
gi|427316318|gb|EKW78275.1| feS assembly protein SufD [Escherichia coli 97.1742]
gi|427318240|gb|EKW80120.1| feS assembly protein SufD [Escherichia coli 97.0007]
gi|427322605|gb|EKW84234.1| feS assembly protein SufD [Escherichia coli 99.0672]
gi|427330378|gb|EKW91649.1| feS assembly protein SufD [Escherichia coli 99.0678]
gi|427330798|gb|EKW92059.1| feS assembly protein SufD [Escherichia coli 99.0713]
gi|429257247|gb|EKY41338.1| feS assembly protein SufD [Escherichia coli 97.0010]
gi|444539828|gb|ELV19535.1| feS assembly protein SufD [Escherichia coli 99.0814]
gi|444548925|gb|ELV27259.1| feS assembly protein SufD [Escherichia coli 99.0815]
gi|444559970|gb|ELV37163.1| feS assembly protein SufD [Escherichia coli 99.0839]
gi|444561622|gb|ELV38725.1| feS assembly protein SufD [Escherichia coli 99.0816]
gi|444566334|gb|ELV43169.1| feS assembly protein SufD [Escherichia coli 99.0848]
gi|444575959|gb|ELV52179.1| feS assembly protein SufD [Escherichia coli 99.1753]
gi|444579991|gb|ELV55954.1| feS assembly protein SufD [Escherichia coli 99.1775]
gi|444581545|gb|ELV57383.1| feS assembly protein SufD [Escherichia coli 99.1793]
gi|444595753|gb|ELV70849.1| feS assembly protein SufD [Escherichia coli PA11]
gi|444595956|gb|ELV71051.1| feS assembly protein SufD [Escherichia coli ATCC 700728]
gi|444598466|gb|ELV73387.1| feS assembly protein SufD [Escherichia coli 99.1805]
gi|444609341|gb|ELV83799.1| feS assembly protein SufD [Escherichia coli PA13]
gi|444609731|gb|ELV84186.1| feS assembly protein SufD [Escherichia coli PA19]
gi|444617792|gb|ELV91899.1| feS assembly protein SufD [Escherichia coli PA2]
gi|444626535|gb|ELW00327.1| feS assembly protein SufD [Escherichia coli PA48]
gi|444626900|gb|ELW00689.1| feS assembly protein SufD [Escherichia coli PA47]
gi|444632218|gb|ELW05794.1| feS assembly protein SufD [Escherichia coli PA8]
gi|444641514|gb|ELW14744.1| feS assembly protein SufD [Escherichia coli 7.1982]
gi|444644564|gb|ELW17674.1| feS assembly protein SufD [Escherichia coli 99.1781]
gi|444647748|gb|ELW20711.1| feS assembly protein SufD [Escherichia coli 99.1762]
gi|444656309|gb|ELW28839.1| feS assembly protein SufD [Escherichia coli PA35]
gi|444662638|gb|ELW34890.1| feS assembly protein SufD [Escherichia coli 3.4880]
gi|444668122|gb|ELW40146.1| feS assembly protein SufD [Escherichia coli 95.0083]
gi|444671294|gb|ELW43122.1| feS assembly protein SufD [Escherichia coli 99.0670]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLTRI 414
>gi|399544971|ref|YP_006558279.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
gi|399160303|gb|AFP30866.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
Length = 428
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 120/221 (54%), Gaps = 5/221 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G++ N+V E V+ +G ++ L + + HI T VRQ TAS +E V GG L
Sbjct: 196 GSEPVMVNTVTEFVLAEGARITSVRLTLEGESVQHIGATGVRQATASRFESHCVGFGGPL 255
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 318
RH++ ++ G E +L+ + Q D H+ + +H +C + ++ I A
Sbjct: 256 RRHDLQLRLEGEGAECKLNGVVVTQGKQHYDNHTSI--EHIAAHCNSEETYRNIAA-GQS 312
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
A+F+G + +++ AQ+++A ++LLL A ++ KP L+I ADDVKC+HGA I L +
Sbjct: 313 HAIFNGRIHIHQDAQKSNANMSNKNLLLSTGAEIDTKPELEIYADDVKCAHGATIGQLNK 372
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+ LFY +RG+ A L +F E++E+ P +++ V
Sbjct: 373 TSLFYLVSRGVGRREANTLLTIAFINELVEQIPVEAVKEAV 413
>gi|416897596|ref|ZP_11927244.1| feS assembly protein SufD [Escherichia coli STEC_7v]
gi|417115934|ref|ZP_11967070.1| FeS assembly protein SufD [Escherichia coli 1.2741]
gi|422798966|ref|ZP_16847465.1| FeS assembly protein SufD [Escherichia coli M863]
gi|323968448|gb|EGB63854.1| FeS assembly protein SufD [Escherichia coli M863]
gi|327252798|gb|EGE64452.1| feS assembly protein SufD [Escherichia coli STEC_7v]
gi|386141353|gb|EIG82505.1| FeS assembly protein SufD [Escherichia coli 1.2741]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLVMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|237731313|ref|ZP_04561794.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
sp. 30_2]
gi|226906852|gb|EEH92770.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
sp. 30_2]
Length = 414
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN Q G +T L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 240 GDAVLRHNTSTQLNGENTTLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 297
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 298 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATVG 356
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI + A+ ++++F AE+ E +++ QV++ +
Sbjct: 357 RIDDEQMFYLRSRGIGQQDAQHMILYAFAAELTEALGDETLKQQVLARI 405
>gi|256820069|ref|YP_003141348.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
gi|256581652|gb|ACU92787.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
Length = 433
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 113/223 (50%), Gaps = 1/223 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V EV + K + + LQN L A+ I T + QE S + S GG L+R+N++
Sbjct: 209 NAVTEVFVAKDAFLDYYKLQNDRLTASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G E+ L +L Q D ++ + +P Q +K IV+ VF+G +
Sbjct: 269 YHQGEHLESTLKGLSILKGTQHTDHYTLVNHAYPNCESHQDYKSIVSDE-ATNVFNGKIM 327
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L LFY Q R
Sbjct: 328 VEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSADFLFYLQTR 387
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
GI + A L ++F V+E P++ + + +G T
Sbjct: 388 GIGKKEASALLTYAFANTVLESVKIPALSEYINRIIAKKLGVT 430
>gi|197263874|ref|ZP_03163948.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197242129|gb|EDY24749.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 195/417 (46%), Gaps = 59/417 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLS------NLPDGV 152
Q S++ L + DA LV +DG F+ QNS ++S L V
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVSVRDERQTLAASV 121
Query: 153 YVGSLLGVSDGIMKRVSDFISEFQCGD------LFWSINGMGAPDLGVIYVP-----AEG 201
+ L +++ + + V+ +I + L G+ +L + AEG
Sbjct: 122 HPEVFLHLTESLAQCVT-YIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHLALAEG 180
Query: 202 NDC-------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 248
+ ++ + L + + ++RH L ++ ++ H + T +
Sbjct: 181 AEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDAS 240
Query: 249 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 306
G + RH+ Q G + L+S + V ++ D +R L+H +GYC R
Sbjct: 241 AFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSR 298
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
QLHK IV+ G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVK
Sbjct: 299 QLHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVK 357
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
CSHGA I +++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 358 CSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|387888984|ref|YP_006319282.1| FeS assembly protein SufD [Escherichia blattae DSM 4481]
gi|414594794|ref|ZP_11444428.1| iron-sulfur cluster assembly protein SufD [Escherichia blattae NBRC
105725]
gi|386923817|gb|AFJ46771.1| FeS assembly protein SufD [Escherichia blattae DSM 4481]
gi|403194296|dbj|GAB82080.1| iron-sulfur cluster assembly protein SufD [Escherichia blattae NBRC
105725]
Length = 435
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 116/221 (52%), Gaps = 5/221 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
++ L + +G ++ H L ++ + H +R E + G + RH+
Sbjct: 205 HFTGGRLTMEVGANARLEHYKLAFENGASYHFAHNDLRIERDAQVHSNSFLLGAGVLRHH 264
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
+ G + L+S L V + D +R L H RGYC RQLHK IV G+AVF
Sbjct: 265 TSCELNGENISLRLNSLALPVGSEVCD--TRTWLAHNRGYCNSRQLHKTIV-RDKGRAVF 321
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G + V +A +TD +LLL A V+ KP L+I ADDVKCSHGA + L++ QLF
Sbjct: 322 NGLITVAPHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRLDDEQLF 381
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
Y ++RGID AR+ ++ +F E+ E +R+QV++ V
Sbjct: 382 YLRSRGIDETAAREMILHAFAGELTEAITIVPLRHQVLARV 422
>gi|416828585|ref|ZP_11898073.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. LSU-61]
gi|320668705|gb|EFX35510.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. LSU-61]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLTRI 414
>gi|152995375|ref|YP_001340210.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
gi|150836299|gb|ABR70275.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
Length = 419
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 179/388 (46%), Gaps = 58/388 (14%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS----TDAQFPSLV 132
R + + L +T WP+RK E +R+T ++ +Q + I S +D+S D LV
Sbjct: 23 RAHALELLANTKWPTRKTEAWRYTPLRPVERTQAKVI---SDKIDLSPVAIADLSAIELV 79
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWSINGMG 188
++G + L LP+G+ + LG G ++ +D +S F +F +N
Sbjct: 80 FVNGQFDQAQLT-KTLPEGLSIS--LGGDLGSAQQ-ADALSVFSTIKPERHIFGLVNDAL 135
Query: 189 APDLGVIYVPAEGNDCYW-------------ANSVLEVVIGKGGK---VRHSYLQNQSLN 232
A D+ VI V AEG + +++ ++V + G + + Q +S N
Sbjct: 136 AQDVVVITV-AEGVEITQPIRISSLLSQGAESHTRVQVALAAGSRLTVIEDVQAQGESFN 194
Query: 233 AAHIKWTAVRQETASGYELV-----EVSTGGK--------------------LSRHNVHV 267
A +++ Y V+ GG LSR + +
Sbjct: 195 TAFVEYNVAANARLEHYRFAMQTGSNVAIGGSHFNLHDHAKMNSTIVGFGSDLSRLDTDI 254
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G + +L++ +LL + DLH+ + P G + +CIVA +A+F+G +
Sbjct: 255 IHAGEFADAKLNAMYLLDGKELFDLHATVEHAMPNGKTEENVRCIVADR-ARAIFNGRIH 313
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
++R AQ+T A R+LLL +A +N KP L+I ADDVKC+HGA ++ +++ L+Y Q R
Sbjct: 314 IHRDAQKTLAELNNRNLLLSDKAEINTKPELEIYADDVKCAHGATVAQIDKQALYYLQTR 373
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSI 415
G+ A+ L F F E+I+ P ++
Sbjct: 374 GVSRSKAQVMLNFGFINELIDLMPNAAL 401
>gi|428989969|ref|ZP_19059017.1| feS assembly protein SufD [Escherichia coli 93.0056]
gi|428995743|ref|ZP_19064425.1| feS assembly protein SufD [Escherichia coli 94.0618]
gi|429826439|ref|ZP_19357577.1| feS assembly protein SufD [Escherichia coli 96.0109]
gi|427245084|gb|EKW12386.1| feS assembly protein SufD [Escherichia coli 93.0056]
gi|427248058|gb|EKW15103.1| feS assembly protein SufD [Escherichia coli 94.0618]
gi|429255382|gb|EKY39711.1| feS assembly protein SufD [Escherichia coli 96.0109]
Length = 388
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 214 GGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 271
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 272 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 330
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 331 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLTRI 379
>gi|386361340|ref|YP_006059585.1| FeS assembly protein SufD [Thermus thermophilus JL-18]
gi|383510367|gb|AFH39799.1| FeS assembly protein SufD [Thermus thermophilus JL-18]
Length = 431
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 178/415 (42%), Gaps = 65/415 (15%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P L + R + + P+PS+KDE +R+TD S + +
Sbjct: 13 SKALGEPAWLLEKRLKALEAFARLPYPSKKDENWRYTDLSEAPLELPVEAPKGLKLSRDE 72
Query: 109 QIQPITRPSSSLDVS----------TDAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSL 157
+P+ R DVS A+ P + G + S A L PD V
Sbjct: 73 LPEPVRRRLEKTDVSGFLVFVGPDLVYAEVPEELRQKGLVFTSLAEALKTHPDKVEAALF 132
Query: 158 LGV--SDGIMKRVSDFISEFQCGDLFWSINGMGAPD-LGVIYVPAEGNDCYWANSVL--- 211
V D + S F F G + G+ LGV V EG S+L
Sbjct: 133 QAVYTEDKFAAQNSAF---FTHGAFLYVPAGLEVEKPLGVFKVLLEGGKASAGRSLLFLE 189
Query: 212 -------------------------EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
E+V+ G ++RH+++Q H E
Sbjct: 190 DNAKAAYIEEYLSLDLSPTLHLSATEMVLRPGARLRHAHVQTFGEGVWHFHRQRALLERD 249
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 306
SG + V+ GG +R V + +GP E+E+ + Q D ++ L H + R
Sbjct: 250 SGLNDLVVNLGGAYARSEVASELVGPGAESEMLGLYFGHGRQQFDHYT--LQHHVEHHTR 307
Query: 307 Q--LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
L+K V +AVF G +++ + AQ+TDA Q R+LLL P A V+ P L+I A+D
Sbjct: 308 SDLLYKGAVKDE-ARAVFSGLIRLEKGAQKTDAYQANRNLLLSPTARVDSIPQLEIGAND 366
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
V+C+HG+ + ++E QLFY Q+RG+ A++ LV + A+V+ R P ++R +
Sbjct: 367 VRCTHGSTTAPVDEMQLFYLQSRGLPRGLAQELLVKAHLADVLSRIPLKALRAHI 421
>gi|194477105|ref|YP_002049284.1| ABC transporter, membrane component [Paulinella chromatophora]
gi|171192112|gb|ACB43074.1| ABC transporter, membrane component [Paulinella chromatophora]
Length = 417
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 112/203 (55%), Gaps = 1/203 (0%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
S LE +G+ ++ H L A + TA+ Q+ S Y+ V G L+R +
Sbjct: 191 STLEAHLGRESQLDHGILAFGDGEAGLLAHTAIVQKPKSNYKETYVIKGWGLARFEPRIT 250
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 328
Q+ + ET L ++ +D D HS + + P G Q+HK I A + G ++F+G ++V
Sbjct: 251 QISGEAETTLRGLQVVDADNQIDTHSYVSFEGPGGKLDQVHKAI-AEAKGHSIFNGIIRV 309
Query: 329 NRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARG 388
AQ T A QL+R+LL+ A ++ KP L+I+ADDVKC+HGA ++ +++ +LFY Q+RG
Sbjct: 310 PSLAQGTKASQLSRNLLISNNARIDTKPELEIVADDVKCTHGATVTQMQQEELFYLQSRG 369
Query: 389 IDLETARKALVFSFGAEVIERFP 411
+ + A + + +++ P
Sbjct: 370 LAADQAAALVKRGYYQDILNDLP 392
>gi|192361506|ref|YP_001981956.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
gi|190687671|gb|ACE85349.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
Length = 434
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 186/412 (45%), Gaps = 57/412 (13%)
Query: 69 QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----SQIQPITRPSSSLD-V 122
Q LP LQ+LR ++ L+ PWP+RK E +++T ++ S Q T ++SLD +
Sbjct: 16 QVLPWLQELRVQAADAWLAQPWPTRKTEHWKYTPLQSLQKDTPQSWGQGETLEAASLDLI 75
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGV----------------YVGSLL-------- 158
DA LV ++G NS L+ S+LP GV Y+G ++
Sbjct: 76 PLDA--TRLVFVNGVF-NSELS-SSLPAGVVRFSQANSEQQALVRQYLGRVVEGERHLFA 131
Query: 159 -----GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD------LGVI-----------Y 196
V++G++ V I + L + AP L V+ Y
Sbjct: 132 TLNNAWVNEGVLVHVPRNIQWEKPVYLVHVSSAQDAPTSANSRVLVVLESGASATLVEQY 191
Query: 197 VPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 256
+ + + N++ E+V+G + H L + NA HI + ++ ++
Sbjct: 192 ISTDEIQNSFVNALSELVLGDNASLHHYRLNLEQENALHIGAVHANLQRSARLRAFTLAL 251
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 316
G +L R + + P E +L +L Q D H+ + P ++ + IV S
Sbjct: 252 GSRLQRIDYQLNHRAPGAELDLQGLYLPRHQQLVDYHTTINHWVPNCTSNEIFRGIVGDS 311
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
QAVF+G + +++ AQ+T A ++LL +A VN KP L+I ADDVKC+HGA +S L
Sbjct: 312 -AQAVFNGRIYIHQDAQKTLAELSNKNLLTSNKAEVNTKPELEIYADDVKCAHGATVSQL 370
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+Y Q+RG+ + A L F F E++E+ P I + ++ + G
Sbjct: 371 NAQARYYLQSRGVSRQEAEVMLSFGFVNELLEQIAEPMIHDYLLPRLAARFG 422
>gi|420275430|ref|ZP_14777731.1| feS assembly protein SufD [Escherichia coli PA40]
gi|424115599|ref|ZP_17849530.1| feS assembly protein SufD [Escherichia coli PA3]
gi|424313361|ref|ZP_17895654.1| feS assembly protein SufD [Escherichia coli PA28]
gi|424513985|ref|ZP_17958770.1| feS assembly protein SufD [Escherichia coli TW14313]
gi|424532350|ref|ZP_17975756.1| feS assembly protein SufD [Escherichia coli EC4422]
gi|424538355|ref|ZP_17981373.1| feS assembly protein SufD [Escherichia coli EC4013]
gi|444924884|ref|ZP_21244291.1| feS assembly protein SufD [Escherichia coli 09BKT078844]
gi|390681368|gb|EIN57161.1| feS assembly protein SufD [Escherichia coli PA3]
gi|390729570|gb|EIO01730.1| feS assembly protein SufD [Escherichia coli PA28]
gi|390759211|gb|EIO28609.1| feS assembly protein SufD [Escherichia coli PA40]
gi|390851021|gb|EIP14354.1| feS assembly protein SufD [Escherichia coli TW14313]
gi|390863898|gb|EIP26027.1| feS assembly protein SufD [Escherichia coli EC4422]
gi|390868231|gb|EIP29989.1| feS assembly protein SufD [Escherichia coli EC4013]
gi|444542967|gb|ELV22292.1| feS assembly protein SufD [Escherichia coli 09BKT078844]
Length = 407
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 233 GGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 290
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 291 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 349
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 350 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLTRI 398
>gi|88801810|ref|ZP_01117338.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
gi|88782468|gb|EAR13645.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
Length = 437
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V E+ K V +QN A+ I + + Q++ S + S GG ++R+N++
Sbjct: 211 NAVTEIFAAKDATVDIYKIQNDHKTASLIDNSYIEQKSNSVVSVHTFSFGGNITRNNLNF 270
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
Q G ++ L ++ Q D H+ + P Q +K I VF+G V
Sbjct: 271 YQRGEHIDSILKGITIIEGKQHVDHHTMVQHIEPNCESHQDYKGIFDER-STGVFNGKVI 329
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
VN+ AQ+T+A Q ++L+ RAT+N KP L+I ADDVKCSHG I L++ LFY Q R
Sbjct: 330 VNKEAQKTNAYQKNNNILVSDRATINAKPQLEIFADDVKCSHGCTIGQLDDEALFYMQQR 389
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
GI + + L+F+F V+E P ++ ++ + N +
Sbjct: 390 GIPEKEGKALLMFAFANTVLESVKIPEVKQRIAKIIANKLN 430
>gi|432815376|ref|ZP_20049161.1| FeS cluster assembly protein sufD [Escherichia coli KTE115]
gi|431364432|gb|ELG50963.1| FeS cluster assembly protein sufD [Escherichia coli KTE115]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSSQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|197285272|ref|YP_002151144.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis HI4320]
gi|227355702|ref|ZP_03840095.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis ATCC 29906]
gi|425068229|ref|ZP_18471345.1| FeS assembly protein SufD [Proteus mirabilis WGLW6]
gi|194682759|emb|CAR42981.1| subunit of cysteine desulfurase activator complex [Proteus
mirabilis HI4320]
gi|227164021|gb|EEI48918.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis ATCC 29906]
gi|404600211|gb|EKB00657.1| FeS assembly protein SufD [Proteus mirabilis WGLW6]
Length = 435
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 121/233 (51%), Gaps = 11/233 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 252
Y+ ++G + ++ + L IG H L + S + AH + R + Y +
Sbjct: 202 YISSDGENRHFTGARLTATIGDNASFNHIKLGFENGISQHFAHNDLSIGRDARVNSYAFL 261
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 310
G KLSRH+ G ++E ++S L +++ D +R L H C RQLHK
Sbjct: 262 ---LGNKLSRHHTSAALTGENSELSMNSVVLPKANEIAD--TRTWLVHGEKNCLSRQLHK 316
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
I A G+AVF+G + V A +TD +LLL +A ++ KP L+I ADDVKCSHG
Sbjct: 317 SI-AMDAGKAVFNGMITVTPQALKTDGQMTNNNLLLGDKAQIDTKPQLEIYADDVKCSHG 375
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
A + +++ QLFY ++RGI L ARK ++ +F AE+ E I+ V+ +
Sbjct: 376 ATVGRIDDEQLFYLRSRGIALSEARKMIIHAFAAELTESLENSVIKTHVLERI 428
>gi|423120689|ref|ZP_17108373.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5246]
gi|376396190|gb|EHT08833.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5246]
Length = 424
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + H Q LG ++ ++S + V+++ D SR LDH GYC RQLHK IV+
Sbjct: 250 GGAVLHHRTSTQLLGENSTLRINSLAMPVNNEVCD--SRTWLDHRVGYCNSRQLHKTIVS 307
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ +P L+I ADDVKCSHGA I
Sbjct: 308 DK-GRAVFNGLINVAKHAIKTDGQMTNNNLLLGRLAEVDTRPQLEIYADDVKCSHGATIG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++ QLFY ++RGI A+ ++++F AE+ E ++R Q+++ +
Sbjct: 367 RIDNEQLFYLRSRGIPYRAAQHMILYAFAAELTEAIGDETLRAQILARI 415
>gi|322833499|ref|YP_004213526.1| FeS assembly protein SufD [Rahnella sp. Y9602]
gi|384258634|ref|YP_005402568.1| FeS assembly protein SufD [Rahnella aquatilis HX2]
gi|321168700|gb|ADW74399.1| FeS assembly protein SufD [Rahnella sp. Y9602]
gi|380754610|gb|AFE59001.1| FeS assembly protein SufD [Rahnella aquatilis HX2]
Length = 433
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+R+N Q G ++ +++S L V + D +R L+H +GYC +QLHK IV
Sbjct: 260 GAGLTRNNTSAQLNGENSNLDINSLVLPVDSEIAD--TRTYLEHNKGYCNSKQLHKVIV- 316
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +A+F+G +KV ++A +TD +LLL V+ KP L+I ADDVKCSHGA +
Sbjct: 317 NDRAKAIFNGMIKVAQHALKTDGKMTNNNLLLGKHTEVDTKPQLEIYADDVKCSHGATVG 376
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ QLFY + RGI + A++ ++F+F AE+ E ++R V++ +
Sbjct: 377 RIDDEQLFYLRTRGISGQDAQQMIIFAFAAELTEAIKNETLREVVIARI 425
>gi|327404072|ref|YP_004344910.1| FeS assembly protein SufD [Fluviicola taffensis DSM 16823]
gi|327319580|gb|AEA44072.1| FeS assembly protein SufD [Fluviicola taffensis DSM 16823]
Length = 422
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 182/393 (46%), Gaps = 58/393 (14%)
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQFPSL 131
LR + + L T +P+ + E +++T + IK+S Q PIT Q+
Sbjct: 26 LRQKALEILEQTAFPTTRTEAWKYTRVAKIKNSTLSVQENPITVNGYFGLEENSIQY--- 82
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD 191
V ++G ++ L+ + PDGV + L + + + + + G++F SIN D
Sbjct: 83 VFVNGHF-SAELSSKSFPDGVKILPLSQMDEAEVLVLGRNVG--LDGEIFSSINTAYVTD 139
Query: 192 LGVIYVPAE--------------GNDCY-----------------------------WAN 208
++V A+ G + + N
Sbjct: 140 GLYVHVSAKMQIEPTIEIIQINTGKNILTNLRHVLVAEAFSKVQLIQRSLSVNGTENFTN 199
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
+ E+ +GK V LQ + + + I V Q S + + V+ G L R+N+ ++
Sbjct: 200 VISEIHVGKNAYVTIDKLQEEDESCSQISTELVNQHQDSNFTINTVTLNGALVRNNLTIE 259
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNV 326
G + ET L+ ++L +Q D H+ ++DH C +L+K ++ AVF+G V
Sbjct: 260 VDGQNCETHLNGAYILNGNQHVDNHT--IVDHKVANCESFELYKGVI-DGKATAVFNGKV 316
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
V + AQ+ +A Q ++LL ATVN KP L+I ADDVKCSHG+ L+E +FY +A
Sbjct: 317 YVRKDAQKINAFQSNGNVLLSNDATVNSKPELEIYADDVKCSHGSTTGQLDEEAVFYLRA 376
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
RG+ +AR+ +V +F +VI++ ++ N++
Sbjct: 377 RGLSEASARQLMVGAFIEDVIQKIENQAVTNRI 409
>gi|300918051|ref|ZP_07134672.1| FeS assembly protein SufD [Escherichia coli MS 115-1]
gi|300414742|gb|EFJ98052.1| FeS assembly protein SufD [Escherichia coli MS 115-1]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGVVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|421812346|ref|ZP_16248094.1| feS assembly protein SufD [Escherichia coli 8.0416]
gi|408602432|gb|EKK76147.1| feS assembly protein SufD [Escherichia coli 8.0416]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQLIIYAFAAELTEALRDEGLKQQVLTRI 414
>gi|253688824|ref|YP_003018014.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755402|gb|ACT13478.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 448
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVA 314
G L+RH+ Q G T ++S L V + D +R L+H +GY RQLHK IV
Sbjct: 268 GAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV- 324
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +AVF+G +KV +A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 325 NDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIG 384
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A++ ++F+F AEV E S+R+ V+ +
Sbjct: 385 RMDEEQLFYLRSRGITEQDAQQMIIFAFAAEVTEAIENESLRDVVLQRI 433
>gi|419700478|ref|ZP_14228084.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SCI-07]
gi|422381748|ref|ZP_16461912.1| FeS assembly protein SufD [Escherichia coli MS 57-2]
gi|432732376|ref|ZP_19967209.1| FeS cluster assembly protein sufD [Escherichia coli KTE45]
gi|432759460|ref|ZP_19993955.1| FeS cluster assembly protein sufD [Escherichia coli KTE46]
gi|433198250|ref|ZP_20382162.1| FeS cluster assembly protein sufD [Escherichia coli KTE94]
gi|324007049|gb|EGB76268.1| FeS assembly protein SufD [Escherichia coli MS 57-2]
gi|380348254|gb|EIA36536.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SCI-07]
gi|431275563|gb|ELF66590.1| FeS cluster assembly protein sufD [Escherichia coli KTE45]
gi|431308633|gb|ELF96912.1| FeS cluster assembly protein sufD [Escherichia coli KTE46]
gi|431722916|gb|ELJ86878.1| FeS cluster assembly protein sufD [Escherichia coli KTE94]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSSQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|417689575|ref|ZP_12338806.1| feS assembly protein SufD [Shigella boydii 5216-82]
gi|332090821|gb|EGI95913.1| feS assembly protein SufD [Shigella boydii 5216-82]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEVLKQQVLARI 414
>gi|311279429|ref|YP_003941660.1| FeS assembly protein SufD [Enterobacter cloacae SCF1]
gi|308748624|gb|ADO48376.1| FeS assembly protein SufD [Enterobacter cloacae SCF1]
Length = 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN + G + ++S + V + D +R L+H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSARLNGENATLRINSLAMPVKSEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGVITVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ QLFY ++RGI + A++ ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQLFYLRSRGIGQQAAQQMIIYAFAAELTEAISDDALKQQVLARI 414
>gi|254505870|ref|ZP_05118015.1| FeS assembly protein SufD [Vibrio parahaemolyticus 16]
gi|219551093|gb|EED28073.1| FeS assembly protein SufD [Vibrio parahaemolyticus 16]
Length = 411
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
S L IG+G +H+ L +S H +R + + V G L RH +
Sbjct: 187 SRLTSYIGEGANYQHTKLIEESNQQHHFGHNDIRLQRDAKANSTAVLLSGLLVRHQTSSE 246
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNV 326
G + E ++S + +QT D SR L H +CR Q+HK I+ G AVFDG +
Sbjct: 247 LSGDNGELAMNSVAMPRDEQTFD--SRTYLKHNAPHCRSEQMHK-IIGRDKGNAVFDGMI 303
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
V+ A +TD T SLLL A +N KP L+I ADDVKCSHGA L+ +Q+ Y +A
Sbjct: 304 YVDPVALKTDGQMDTHSLLLSDHAQINCKPQLEIYADDVKCSHGATTGQLDNNQIDYMRA 363
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
RGI+ + A + L+ +F EV ++ +PS+R+ V
Sbjct: 364 RGINRQQAEQMLLSAFVCEVADKIRHPSLRSYV 396
>gi|385872296|gb|AFI90816.1| FeS assembly protein SufD [Pectobacterium sp. SCC3193]
Length = 448
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVA 314
G L+RH+ Q G T ++S L V + D +R L+H +GY RQLHK IV
Sbjct: 268 GAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV- 324
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +AVF+G +KV +A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 325 NDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIG 384
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A++ ++F+F AEV E S+R+ V+ +
Sbjct: 385 RMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDVVLERI 433
>gi|421080521|ref|ZP_15541439.1| Cysteine desulfurase activator complex subunit SufD [Pectobacterium
wasabiae CFBP 3304]
gi|401704533|gb|EJS94738.1| Cysteine desulfurase activator complex subunit SufD [Pectobacterium
wasabiae CFBP 3304]
Length = 448
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVA 314
G L+RH+ Q G T ++S L V + D +R L+H +GY RQLHK IV
Sbjct: 268 GAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV- 324
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +AVF+G +KV +A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 325 NDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIG 384
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A++ ++F+F AEV E S+R+ V+ +
Sbjct: 385 RMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDVVLERI 433
>gi|440747410|ref|ZP_20926669.1| Iron-sulfur cluster assembly protein SufD [Mariniradius
saccharolyticus AK6]
gi|436484330|gb|ELP40334.1| Iron-sulfur cluster assembly protein SufD [Mariniradius
saccharolyticus AK6]
Length = 425
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y++NSV E+ +G+ V +S LQN A + + + VS G L R+
Sbjct: 199 VYFSNSVTEIKVGQNSHVHYSRLQNDGSKAIVVSNFETDIHRDATFTSTVVSLSGDLVRN 258
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 323
N+ ++ + +LL D H+ + P +L+K I+ + VF+
Sbjct: 259 NLSLRLQDSGCVGNMYGLYLLNGKTHVDNHTNVDHTKPHAESNELYKGILTDQ-SRGVFN 317
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V + AQ+T+A Q ++LL A VN KP L+I ADDVKCSHG L+E LFY
Sbjct: 318 GKIFVRQDAQKTNAFQQNNNILLSEDAIVNTKPQLEIWADDVKCSHGCTTGQLDEEALFY 377
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
QARGID A+ L+++F EV+E S RN + V+ +G+
Sbjct: 378 LQARGIDKMQAKGLLLYAFAGEVLEHINDESFRNYIDRLVQERLGS 423
>gi|312966834|ref|ZP_07781052.1| feS assembly protein SufD [Escherichia coli 2362-75]
gi|419039577|ref|ZP_13586619.1| feS assembly protein SufD [Escherichia coli DEC2E]
gi|312288298|gb|EFR16200.1| feS assembly protein SufD [Escherichia coli 2362-75]
gi|377894407|gb|EHU58828.1| feS assembly protein SufD [Escherichia coli DEC2E]
Length = 423
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLTNVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDNEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|218705179|ref|YP_002412698.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UMN026]
gi|293405179|ref|ZP_06649171.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli FVEC1412]
gi|298380822|ref|ZP_06990421.1| Fe-S cluster assembly protein SufD [Escherichia coli FVEC1302]
gi|300898538|ref|ZP_07116871.1| FeS assembly protein SufD [Escherichia coli MS 198-1]
gi|417586549|ref|ZP_12237321.1| feS assembly protein SufD [Escherichia coli STEC_C165-02]
gi|419932214|ref|ZP_14449543.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 576-1]
gi|432353592|ref|ZP_19596866.1| FeS cluster assembly protein sufD [Escherichia coli KTE2]
gi|432401943|ref|ZP_19644696.1| FeS cluster assembly protein sufD [Escherichia coli KTE26]
gi|432426116|ref|ZP_19668621.1| FeS cluster assembly protein sufD [Escherichia coli KTE181]
gi|432460735|ref|ZP_19702886.1| FeS cluster assembly protein sufD [Escherichia coli KTE204]
gi|432475857|ref|ZP_19717857.1| FeS cluster assembly protein sufD [Escherichia coli KTE208]
gi|432517746|ref|ZP_19754938.1| FeS cluster assembly protein sufD [Escherichia coli KTE228]
gi|432537844|ref|ZP_19774747.1| FeS cluster assembly protein sufD [Escherichia coli KTE235]
gi|432631416|ref|ZP_19867345.1| FeS cluster assembly protein sufD [Escherichia coli KTE80]
gi|432641062|ref|ZP_19876899.1| FeS cluster assembly protein sufD [Escherichia coli KTE83]
gi|432666048|ref|ZP_19901630.1| FeS cluster assembly protein sufD [Escherichia coli KTE116]
gi|432770644|ref|ZP_20004988.1| FeS cluster assembly protein sufD [Escherichia coli KTE50]
gi|432774770|ref|ZP_20009052.1| FeS cluster assembly protein sufD [Escherichia coli KTE54]
gi|432886623|ref|ZP_20100712.1| FeS cluster assembly protein sufD [Escherichia coli KTE158]
gi|432912720|ref|ZP_20118530.1| FeS cluster assembly protein sufD [Escherichia coli KTE190]
gi|432961698|ref|ZP_20151488.1| FeS cluster assembly protein sufD [Escherichia coli KTE202]
gi|433018639|ref|ZP_20206885.1| FeS cluster assembly protein sufD [Escherichia coli KTE105]
gi|433053186|ref|ZP_20240381.1| FeS cluster assembly protein sufD [Escherichia coli KTE122]
gi|433063072|ref|ZP_20250005.1| FeS cluster assembly protein sufD [Escherichia coli KTE125]
gi|433067964|ref|ZP_20254765.1| FeS cluster assembly protein sufD [Escherichia coli KTE128]
gi|433158711|ref|ZP_20343559.1| FeS cluster assembly protein sufD [Escherichia coli KTE177]
gi|433178324|ref|ZP_20362736.1| FeS cluster assembly protein sufD [Escherichia coli KTE82]
gi|218432276|emb|CAR13166.1| component of SufBCD complex [Escherichia coli UMN026]
gi|291427387|gb|EFF00414.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli FVEC1412]
gi|298278264|gb|EFI19778.1| Fe-S cluster assembly protein SufD [Escherichia coli FVEC1302]
gi|300357802|gb|EFJ73672.1| FeS assembly protein SufD [Escherichia coli MS 198-1]
gi|345338052|gb|EGW70483.1| feS assembly protein SufD [Escherichia coli STEC_C165-02]
gi|388418387|gb|EIL78197.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 576-1]
gi|430875833|gb|ELB99354.1| FeS cluster assembly protein sufD [Escherichia coli KTE2]
gi|430926773|gb|ELC47360.1| FeS cluster assembly protein sufD [Escherichia coli KTE26]
gi|430956456|gb|ELC75130.1| FeS cluster assembly protein sufD [Escherichia coli KTE181]
gi|430989448|gb|ELD05902.1| FeS cluster assembly protein sufD [Escherichia coli KTE204]
gi|431005798|gb|ELD20805.1| FeS cluster assembly protein sufD [Escherichia coli KTE208]
gi|431051794|gb|ELD61456.1| FeS cluster assembly protein sufD [Escherichia coli KTE228]
gi|431069758|gb|ELD78078.1| FeS cluster assembly protein sufD [Escherichia coli KTE235]
gi|431170884|gb|ELE71065.1| FeS cluster assembly protein sufD [Escherichia coli KTE80]
gi|431183327|gb|ELE83143.1| FeS cluster assembly protein sufD [Escherichia coli KTE83]
gi|431201423|gb|ELF00120.1| FeS cluster assembly protein sufD [Escherichia coli KTE116]
gi|431315844|gb|ELG03743.1| FeS cluster assembly protein sufD [Escherichia coli KTE50]
gi|431318485|gb|ELG06180.1| FeS cluster assembly protein sufD [Escherichia coli KTE54]
gi|431416668|gb|ELG99139.1| FeS cluster assembly protein sufD [Escherichia coli KTE158]
gi|431440149|gb|ELH21478.1| FeS cluster assembly protein sufD [Escherichia coli KTE190]
gi|431474654|gb|ELH54460.1| FeS cluster assembly protein sufD [Escherichia coli KTE202]
gi|431533577|gb|ELI10076.1| FeS cluster assembly protein sufD [Escherichia coli KTE105]
gi|431571582|gb|ELI44452.1| FeS cluster assembly protein sufD [Escherichia coli KTE122]
gi|431582906|gb|ELI54916.1| FeS cluster assembly protein sufD [Escherichia coli KTE125]
gi|431585656|gb|ELI57603.1| FeS cluster assembly protein sufD [Escherichia coli KTE128]
gi|431679399|gb|ELJ45311.1| FeS cluster assembly protein sufD [Escherichia coli KTE177]
gi|431704688|gb|ELJ69313.1| FeS cluster assembly protein sufD [Escherichia coli KTE82]
Length = 423
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSSQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|283833344|ref|ZP_06353085.1| FeS assembly protein SufD [Citrobacter youngae ATCC 29220]
gi|291070985|gb|EFE09094.1| FeS assembly protein SufD [Citrobacter youngae ATCC 29220]
Length = 423
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 105/171 (61%), Gaps = 5/171 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G +T L+S + V ++ D +R L H +GYC RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENTTLRLNSLAMPVKNEVCD--TRTWLAHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
+++ Q+FY ++RGI + A++ ++++F AE+ E +++ V++ + +
Sbjct: 366 RIDDEQMFYLRSRGIGQQDAQQMILYAFAAELTEALRDETLKQLVLARIAH 416
>gi|261822004|ref|YP_003260110.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
wasabiae WPP163]
gi|261606017|gb|ACX88503.1| FeS assembly protein SufD [Pectobacterium wasabiae WPP163]
Length = 448
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVA 314
G L+RH+ Q G T ++S L V + D +R L+H +GY RQLHK IV
Sbjct: 268 GAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV- 324
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +AVF+G +KV +A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 325 NDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIG 384
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A++ ++F+F AEV E S+R+ V+ +
Sbjct: 385 RMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDVVLERI 433
>gi|349699194|ref|ZP_08900823.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
europaeus LMG 18494]
Length = 424
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 110/211 (52%), Gaps = 3/211 (1%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y N + ++ + G + H+ +Q + A H+ + R Y+ ++ G L
Sbjct: 194 GRGQYLHNPLYDIAVADEGYLSHARVQAEGRQAVHLAVSHARVAAGGVYDSFTLTLGASL 253
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQ 319
SRH VH P ++ LL Q DL S + P RQ K +++ H+ G
Sbjct: 254 SRHEVHAGLTQPGASVHVNGAQLLSGHQHGDLTSVITHAAPDCVSRQTIKNVLSDHARG- 312
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
VF G + V R AQ+TD Q+ ++LLL A ++ KP L+I ADDVKCSHGA + L++
Sbjct: 313 -VFQGKILVERIAQKTDGYQMNQALLLSDGAEIDAKPELEIYADDVKCSHGATVGALDDD 371
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERF 410
QLFY ++RGI AR L+ +F +V+++
Sbjct: 372 QLFYLRSRGIPDAAARSILIRAFLHDVVDQI 402
>gi|253996497|ref|YP_003048561.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
gi|253983176|gb|ACT48034.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
Length = 442
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 62/399 (15%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMI-KSSQIQPITRPSSSLDVSTDAQFPS----- 130
R ++ + + +PSR++E +++TD SMI K + P P + S++A+ +
Sbjct: 32 RKAAFKRFEAHGFPSRREEEWKYTDVSMISKRGTLAPDNIPP---EASSEAKLLAWSLSS 88
Query: 131 -----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
+V ++G N L +LP GV + SL + + + + +F ++N
Sbjct: 89 ERMHLMVFVNGHFDNGLSTLDDLPAGVQLSSLADMLEDGAELPKPLFQQQHEHTVFSALN 148
Query: 186 GMGAPDLGVIYVP----------------AEGNDCY------------------------ 205
D V+ + G Y
Sbjct: 149 NAFVTDGAVLNIAPGIVLDKPIYLLLIASGHGTAIYPRIIVMAGAGTRATIIEHYMGTLD 208
Query: 206 ---WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
+ N+ ++ + G + H L + AAHI + S + GG+L R
Sbjct: 209 AHNFTNATTQLNLDAGASIEHCKLTQEGPAAAHIAGIHAQLAEGSTFTSKSFVFGGRLVR 268
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQA 320
+++ P+ L +LL Q D H+R+ DH C R+ ++ ++ +
Sbjct: 269 NDITASLNEPNCTCNLDGLYLLNDKQHVDHHTRI--DHRAASCTSREYYRGVLDGD-SRG 325
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+G V V+ A TDA Q +LLL +A +N KP L+I ADDVKC+HGA + L +
Sbjct: 326 VFNGKVVVHAGANHTDANQTNHNLLLSRQAEINTKPQLEIFADDVKCTHGATVGQLSDES 385
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY + RG+D E AR L++ F +VI P +R ++
Sbjct: 386 LFYLRTRGLDEEVARSMLIYGFANDVIRSVDVPYLRTRL 424
>gi|443243238|ref|YP_007376463.1| ABC-type transport system involved in Fe-S cluster assembly
[Nonlabens dokdonensis DSW-6]
gi|442800637|gb|AGC76442.1| ABC-type transport system involved in Fe-S cluster assembly
[Nonlabens dokdonensis DSW-6]
Length = 437
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 5/224 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V +QN L+A+ I T V Q+ S + S GGKL+R+N++
Sbjct: 211 NSVTEIFSAKRALVDWYKIQNDHLSASLIDHTFVEQKDNSEVRIHTFSFGGKLTRNNLNF 270
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGN 325
Q G + L+ ++ Q D HS L+ H C Q +K I VF+G
Sbjct: 271 YQRGEHCNSVLNGVTIIEGKQHVD-HSTLV-HHTAPNCESFQEYKQIFDER-AVGVFNGK 327
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V++ AQ+ +A Q ++L+ AT+N KP L+I ADDV+CSHG I L++ LFY Q
Sbjct: 328 VLVDKIAQKINAYQQNNNILVSDTATINAKPQLEIFADDVRCSHGCTIGQLDDEALFYMQ 387
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
+RGI + AR L+F+F V+E P I++++ + +G
Sbjct: 388 SRGIPKKEARALLMFAFANSVLESVKIPEIKSRITKLIAKKLGV 431
>gi|187730455|ref|YP_001880441.1| cysteine desulfurase activator complex subunit SufD [Shigella
boydii CDC 3083-94]
gi|187427447|gb|ACD06721.1| FeS assembly protein SufD [Shigella boydii CDC 3083-94]
Length = 423
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPLLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|126662697|ref|ZP_01733696.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
gi|126626076|gb|EAZ96765.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
Length = 438
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV EV K V + +QN A + T + Q+ S + S GG ++R+N++
Sbjct: 212 NSVTEVYAQKRAIVDYYKVQNDVQTANLVDNTYIAQKQESRVSVHTFSFGGNITRNNLNF 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G ++ L ++ Q D ++ + P Q +K I+ S VF+G +
Sbjct: 272 YHQGERIDSTLKGITIIGDKQHVDHYTLVQHATPNCESHQNYKTILNDS-STGVFNGKIF 330
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+TDA Q ++L+ +AT+N KP L+I ADDVKCSHG I L+ES +FY Q R
Sbjct: 331 VEKEAQKTDAFQQNNNILIGDKATINAKPQLEIFADDVKCSHGCTIGQLDESAMFYMQQR 390
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
GI + A+ L+++F +EV P ++ ++ + N +G
Sbjct: 391 GIPKKEAKALLMYAFTSEVTNSIKIPELKAKIARLIANKLG 431
>gi|416497560|ref|ZP_11729828.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322655808|gb|EFY52110.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
Length = 439
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|424775418|ref|ZP_18202411.1| hypothetical protein C660_01565 [Alcaligenes sp. HPC1271]
gi|422889128|gb|EKU31508.1| hypothetical protein C660_01565 [Alcaligenes sp. HPC1271]
Length = 435
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 125/234 (53%), Gaps = 5/234 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
YV EG D +++V + + + H LQ ++L H+ V+Q S + +S
Sbjct: 195 YVGQEGTDASLSSAVTRLNVAPDANLTHMKLQQEALQDFHLAAIDVQQGRGSVFNSHSLS 254
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
G +++R+++ G ET + + + D + + ++DH + C R+ ++ I+
Sbjct: 255 FGARIARNDIATVFNGERCETLFNGLYFV--DGRRHVDHNTIIDHAQPNCQSREFYRGIL 312
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
A + + VF G V V + A TD+ Q + SLLL A + +P L+I ADDVKC+HGA +
Sbjct: 313 ADT-ARGVFSGRVLVGKGADGTDSVQRSDSLLLSKMARADSRPELEIYADDVKCAHGATV 371
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
L+ LFY ++RG+ +E AR L+++F A+ +ER S+R++ + L+
Sbjct: 372 GQLDADSLFYLRSRGMTMEDARNMLIYAFAAQSLERIASESLRSRATVGINALL 425
>gi|384432018|ref|YP_005641378.1| FeS assembly protein SufD [Thermus thermophilus SG0.5JP17-16]
gi|333967486|gb|AEG34251.1| FeS assembly protein SufD [Thermus thermophilus SG0.5JP17-16]
Length = 431
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 178/415 (42%), Gaps = 65/415 (15%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P L + R + + P+PS+KDE +R+TD S + +
Sbjct: 13 SKALGEPGWLLEKRLKALEAFARLPYPSKKDENWRYTDLSEAPLELPVEAPKGLRLSRDD 72
Query: 109 QIQPITRPSSSLDVS----------TDAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSL 157
+P+ R DVS A+ P + G + S A L PD V
Sbjct: 73 LPEPVKRRLERTDVSGFLVFVGPDLVYAEVPEALKEKGLVFTSLAEALKTHPDKVEAALF 132
Query: 158 LGV--SDGIMKRVSDFISEFQCGDLFWSINGMGAPD-LGVIYVPAEGNDCYWANSVL--- 211
V D + S F F G + G+ LGV V EG S+L
Sbjct: 133 QAVYTEDKFAAQNSAF---FTHGAFLYVPAGLEVEKPLGVFKVLLEGEKASAGRSLLFLE 189
Query: 212 -------------------------EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
E+V+ G ++RH+++Q H E
Sbjct: 190 DNAKAAYIEEYLSLDLSPTLHLSATEMVLRPGARLRHAHVQTFGEGVWHFHRQRALLERD 249
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 306
SG + V+ GG +R V + +GP E+E+ + Q D ++ L H + R
Sbjct: 250 SGLNDLVVNLGGAYARSEVASELVGPGAESEMLGLYFGHGRQQFDHYT--LQHHVEHHTR 307
Query: 307 Q--LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
L+K V +AVF G +++ + AQ+TDA Q R+LLL P A V+ P L+I A+D
Sbjct: 308 SDLLYKGAVKDE-ARAVFSGLIRLEKGAQKTDAYQANRNLLLSPTARVDSIPQLEIGAND 366
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
V+C+HG+ + ++E QLFY Q+RG+ A++ LV + A+V+ R P ++R +
Sbjct: 367 VRCTHGSTTAPVDEMQLFYLQSRGLPRGLAQELLVKAHLADVLSRIPLKALRAHI 421
>gi|417334099|ref|ZP_12117422.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
gi|353576229|gb|EHC38738.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
Length = 269
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 95 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 152
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 153 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 211
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 212 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 260
>gi|168822238|ref|ZP_02834238.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|409250319|ref|YP_006886130.1| Protein sufD [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|205341326|gb|EDZ28090.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320086147|emb|CBY95921.1| Protein sufD [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|16764722|ref|NP_460337.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167994393|ref|ZP_02575485.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|374980378|ref|ZP_09721708.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378444801|ref|YP_005232433.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378449881|ref|YP_005237240.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|378699259|ref|YP_005181216.1| hypothetical protein SL1344_1306 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378983929|ref|YP_005247084.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378988712|ref|YP_005251876.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|379700543|ref|YP_005242271.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383496083|ref|YP_005396772.1| hypothetical protein UMN798_1430 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|422025523|ref|ZP_16371953.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|422030527|ref|ZP_16376726.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|427549182|ref|ZP_18927263.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|427564808|ref|ZP_18931965.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|427584745|ref|ZP_18936763.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|427607175|ref|ZP_18941577.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|427632272|ref|ZP_18946523.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|427655566|ref|ZP_18951282.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|427660701|ref|ZP_18956189.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|427666722|ref|ZP_18960958.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|427754916|ref|ZP_18966082.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|16419892|gb|AAL20296.1| iron-sulfur component of FhuF stability protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|205327745|gb|EDZ14509.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|261246580|emb|CBG24390.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993259|gb|ACY88144.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157907|emb|CBW17402.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912357|dbj|BAJ36331.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321223998|gb|EFX49061.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323129642|gb|ADX17072.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|332988259|gb|AEF07242.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|380462904|gb|AFD58307.1| hypothetical protein UMN798_1430 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|414020328|gb|EKT03915.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|414020565|gb|EKT04144.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|414022098|gb|EKT05599.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|414034441|gb|EKT17368.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|414035798|gb|EKT18654.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|414039312|gb|EKT21989.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|414048813|gb|EKT31047.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|414050378|gb|EKT32554.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|414054922|gb|EKT36848.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|414060399|gb|EKT41914.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|414066026|gb|EKT46664.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|168239253|ref|ZP_02664311.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737662|ref|YP_002114387.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|194713164|gb|ACF92385.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197288008|gb|EDY27395.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|39935532|ref|NP_947808.1| FeS assembly protein SufD [Rhodopseudomonas palustris CGA009]
gi|39649385|emb|CAE27907.1| sufD, needed for fhuF Fe-S center production/stability
[Rhodopseudomonas palustris CGA009]
Length = 437
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 118/228 (51%), Gaps = 5/228 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
YV EG Y + + IG ++ + + S A +I V + + ++
Sbjct: 203 YVAGEGAAAYQVHDSAVITIGDHARLDYVRIVEDSREAFNITSATVAVGAHAHFNAFGIT 262
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
TGG +SR+ V G +E E + +LL Q D + L+++H +C R+ + +V
Sbjct: 263 TGGLVSRYQAVVTVAGSHSEVETNGVNLLNGKQHAD--TTLVMNHDVPHCVSREGFRAVV 320
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
G +VF G + V + AQQTDA +TR+LLL A V+ KP L+I ADDV C HGAA+
Sbjct: 321 -DDRGHSVFQGRINVRQAAQQTDAKMMTRALLLSDEAEVDNKPELEIFADDVTCGHGAAV 379
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
L++S LFY +ARG+ + A L+ +F E IE ++R V +
Sbjct: 380 GALDDSLLFYLRARGLPQKEAEAMLIQAFVGEAIEAIADDNLRELVTA 427
>gi|350563274|ref|ZP_08932096.1| FeS assembly protein SufD [Thioalkalimicrobium aerophilum AL3]
gi|349779138|gb|EGZ33485.1| FeS assembly protein SufD [Thioalkalimicrobium aerophilum AL3]
Length = 446
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 175/404 (43%), Gaps = 72/404 (17%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-MIKSS-QIQPITRPSSSLDVSTDAQFPS 130
L + R ++ + +PSRKDE ++FT S +K+ I+R +++ D++ F
Sbjct: 39 LARFRQAALNEFIEQGFPSRKDEDWQFTPLSNFLKTHYHFNGISRATAA-DIAKLRPFVD 97
Query: 131 ---LVLIDGFIQNS-ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC--------- 177
LV +DG+ S + +L LPD GVS K DF F C
Sbjct: 98 AWHLVFVDGYFSESLSDDLVGLPD--------GVSIESGKDALDFEMGF-CVFAQSEEDI 148
Query: 178 -GDLFWSINGMGAPD------------------------------------------LGV 194
D F +N M D L V
Sbjct: 149 QQDAFGMLNAMLFDDGVFIEVAPHVQLEKPIVISYVQTLAEHANIVRNKIKLGSSASLNV 208
Query: 195 IYVPAEGNDCY-WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
I +D + + NSV E+ + ++ QN A + + S +
Sbjct: 209 IEQYVAIDDGWGFENSVCEIELAANARLNQVVWQNLPEQATYFNNQFIDLAEHSQFRTHY 268
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
+ GG +SRH HVQ G E+E +S + Q D + +G RQLHK ++
Sbjct: 269 IGLGGAISRHQNHVQMDGDRIESEQNSVCFARNQQIVDTRTYTGHKAEQGLSRQLHKLVL 328
Query: 314 A-HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
A ++G VF+G +KV++ AQ+TD ++LLL +A +N KP L+I ADDVKCSHG+A
Sbjct: 329 ADQAIG--VFNGMIKVDQVAQKTDGMMDNKNLLLSNKAQMNAKPQLEIYADDVKCSHGSA 386
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+ Q+FY QARG+ + AR+ + +F E +E ++R
Sbjct: 387 SGQISADQIFYLQARGLSKQQARQLVTLAFLMEPLETVVAETVR 430
>gi|259908555|ref|YP_002648911.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
pyrifoliae Ep1/96]
gi|224964177|emb|CAX55684.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
pyrifoliae Ep1/96]
Length = 399
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RH+ + G ++ ++S L + + D SR L+H +GYC RQLHK IV
Sbjct: 225 GAGLTRHHTSTRLNGEGSDLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV- 281
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+AVF+G +KV R+A +TD +LLL A V+ KP L+I ADDVKC HGA I
Sbjct: 282 RDRARAVFNGIIKVARHALKTDGQMSNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIG 341
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E Q+FY ++RGID A++ ++++F AE+ E +++ V+ +
Sbjct: 342 RIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDETLKEAVIQRI 390
>gi|197247474|ref|YP_002146667.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|440765258|ref|ZP_20944278.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|440767715|ref|ZP_20946691.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
gi|440774165|ref|ZP_20953053.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|197211177|gb|ACH48574.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|436413683|gb|ELP11616.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|436414382|gb|ELP12312.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|436419624|gb|ELP17499.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|204927622|ref|ZP_03218823.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|452120458|ref|YP_007470706.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
gi|204322964|gb|EDZ08160.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|451909462|gb|AGF81268.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|161614214|ref|YP_001588179.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|168463221|ref|ZP_02697152.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442942|ref|YP_002040627.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|200390278|ref|ZP_03216889.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|417539663|ref|ZP_12191895.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|418513882|ref|ZP_13080103.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|418761151|ref|ZP_13317296.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418768708|ref|ZP_13324752.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418769647|ref|ZP_13325674.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418776113|ref|ZP_13332062.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418780454|ref|ZP_13336343.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418786115|ref|ZP_13341935.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418788510|ref|ZP_13344304.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418795832|ref|ZP_13351533.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418798571|ref|ZP_13354248.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|418802306|ref|ZP_13357933.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|418808909|ref|ZP_13364462.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418813065|ref|ZP_13368586.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418816855|ref|ZP_13372343.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418820296|ref|ZP_13375729.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418824926|ref|ZP_13380256.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|418832723|ref|ZP_13387657.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418835385|ref|ZP_13390280.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418839805|ref|ZP_13394637.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418846399|ref|ZP_13401168.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418849688|ref|ZP_13404413.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418855385|ref|ZP_13410041.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418858857|ref|ZP_13413467.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418862943|ref|ZP_13417481.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418868562|ref|ZP_13423003.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419787683|ref|ZP_14313390.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419792057|ref|ZP_14317700.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|161363578|gb|ABX67346.1| hypothetical protein SPAB_01957 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401605|gb|ACF61827.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195633913|gb|EDX52265.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|199602723|gb|EDZ01269.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|353664051|gb|EHD02565.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|366080796|gb|EHN44753.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|392619178|gb|EIX01563.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392619441|gb|EIX01825.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392730708|gb|EIZ87948.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392739093|gb|EIZ96232.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392740769|gb|EIZ97884.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392746746|gb|EJA03752.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392749129|gb|EJA06107.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392749504|gb|EJA06481.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392758360|gb|EJA15235.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392762812|gb|EJA19624.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392767228|gb|EJA24000.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392774291|gb|EJA30986.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392775592|gb|EJA32284.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392777319|gb|EJA34002.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|392789023|gb|EJA45543.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392792565|gb|EJA49019.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392796793|gb|EJA53121.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392803795|gb|EJA59979.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392810272|gb|EJA66292.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392812249|gb|EJA68244.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392818788|gb|EJA74668.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|392820691|gb|EJA76540.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392821443|gb|EJA77267.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392831624|gb|EJA87255.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392832811|gb|EJA88426.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392837252|gb|EJA92822.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|387871433|ref|YP_005802807.1| FeS assembly protein SufD [Erwinia pyrifoliae DSM 12163]
gi|283478520|emb|CAY74436.1| FeS assembly protein SufD [Erwinia pyrifoliae DSM 12163]
Length = 426
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RH+ + G ++ ++S L + + D SR L+H +GYC RQLHK IV
Sbjct: 252 GAGLTRHHTSTRLNGEGSDLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV- 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+AVF+G +KV R+A +TD +LLL A V+ KP L+I ADDVKC HGA I
Sbjct: 309 RDRARAVFNGIIKVARHALKTDGQMSNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIG 368
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E Q+FY ++RGID A++ ++++F AE+ E +++ V+ +
Sbjct: 369 RIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDETLKEAVIQRI 417
>gi|170768723|ref|ZP_02903176.1| FeS assembly protein SufD [Escherichia albertii TW07627]
gi|170122271|gb|EDS91202.1| FeS assembly protein SufD [Escherichia albertii TW07627]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V +A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAPHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEELKQQVLARI 414
>gi|167551663|ref|ZP_02345417.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205323531|gb|EDZ11370.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|416422329|ref|ZP_11690233.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416431054|ref|ZP_11695336.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416441171|ref|ZP_11701383.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416446456|ref|ZP_11705046.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416452110|ref|ZP_11708777.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416458877|ref|ZP_11713386.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416468022|ref|ZP_11717769.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416480042|ref|ZP_11722699.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416489540|ref|ZP_11726304.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416542918|ref|ZP_11751918.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416576135|ref|ZP_11768822.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583431|ref|ZP_11773283.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416590847|ref|ZP_11778022.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416598886|ref|ZP_11783237.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416608037|ref|ZP_11789031.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416611303|ref|ZP_11790733.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416624422|ref|ZP_11798043.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416630418|ref|ZP_11800718.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416640633|ref|ZP_11805098.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416650904|ref|ZP_11810669.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416654587|ref|ZP_11812245.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416665845|ref|ZP_11816996.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416674232|ref|ZP_11821215.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416690757|ref|ZP_11825999.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416707091|ref|ZP_11832189.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416714387|ref|ZP_11837705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416717178|ref|ZP_11839459.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416725069|ref|ZP_11845439.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416734886|ref|ZP_11851327.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416738595|ref|ZP_11853385.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416750721|ref|ZP_11859866.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|416759099|ref|ZP_11864027.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416762036|ref|ZP_11866086.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416768070|ref|ZP_11870347.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|418485791|ref|ZP_13054773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418489737|ref|ZP_13056437.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418495573|ref|ZP_13062015.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418499132|ref|ZP_13065541.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418503010|ref|ZP_13069379.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418510215|ref|ZP_13076501.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418527166|ref|ZP_13093123.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|322616756|gb|EFY13665.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322619984|gb|EFY16857.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322622295|gb|EFY19140.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322627818|gb|EFY24608.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633083|gb|EFY29826.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636671|gb|EFY33374.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322641304|gb|EFY37945.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644928|gb|EFY41461.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650233|gb|EFY46647.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322660134|gb|EFY56373.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322665300|gb|EFY61488.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669557|gb|EFY65705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673483|gb|EFY69585.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677411|gb|EFY73475.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679926|gb|EFY75965.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687398|gb|EFY83370.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192351|gb|EFZ77582.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198630|gb|EFZ83731.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203111|gb|EFZ88142.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323213809|gb|EFZ98587.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217653|gb|EGA02368.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323222898|gb|EGA07249.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227190|gb|EGA11363.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323229455|gb|EGA13578.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323232678|gb|EGA16774.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240284|gb|EGA24328.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323242728|gb|EGA26749.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323245939|gb|EGA29927.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252817|gb|EGA36654.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323255204|gb|EGA38982.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323260084|gb|EGA43709.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323267151|gb|EGA50636.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323271525|gb|EGA54946.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|366055681|gb|EHN20016.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366059429|gb|EHN23703.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366068360|gb|EHN32501.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366071667|gb|EHN35761.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366074734|gb|EHN38796.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366077075|gb|EHN41100.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366827786|gb|EHN54684.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372204635|gb|EHP18162.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|295132093|ref|YP_003582769.1| FeS assembly protein SufD [Zunongwangia profunda SM-A87]
gi|294980108|gb|ADF50573.1| FeS assembly protein SufD [Zunongwangia profunda SM-A87]
Length = 437
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 122/223 (54%), Gaps = 3/223 (1%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
NSV E+ + V + +QN ++ I T + Q+ S + S GG L+R+N++
Sbjct: 210 TNSVTEIFADRRAIVDYYKIQNDKETSSLIDNTFIEQKDESNCSVHTFSFGGNLTRNNLN 269
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGN 325
Q G ++ + ++ Q D ++ + +P Q +K I + S+G VF+G
Sbjct: 270 FYQKGERIDSTMKGVTIIEGKQHVDHNTLVHHIYPNCESHQDYKGIFSDKSVG--VFNGK 327
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V + AQ+T+A Q ++L++ +AT+N KP L+I ADDV+CSHG I L+E LFY Q
Sbjct: 328 VVVEKEAQKTNAYQANNNILVDDKATINSKPQLEIFADDVRCSHGCTIGQLDEEALFYLQ 387
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+RGI + AR L+++F V+E P I+ ++ + + +G
Sbjct: 388 SRGIPRKEARGLLMYAFANNVLESVKIPEIKKRINNLIAEKLG 430
>gi|168233562|ref|ZP_02658620.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472087|ref|ZP_03078071.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194458451|gb|EDX47290.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332336|gb|EDZ19100.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|168263801|ref|ZP_02685774.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205347636|gb|EDZ34267.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 423
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|421883430|ref|ZP_16314663.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|379987070|emb|CCF86936.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
Length = 388
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 214 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 271
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 272 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 330
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 331 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 379
>gi|417326670|ref|ZP_12112297.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
gi|353572644|gb|EHC36226.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
Length = 423
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|192291123|ref|YP_001991728.1| FeS assembly protein SufD [Rhodopseudomonas palustris TIE-1]
gi|192284872|gb|ACF01253.1| FeS assembly protein SufD [Rhodopseudomonas palustris TIE-1]
Length = 437
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 117/228 (51%), Gaps = 5/228 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
YV EG Y + + IG ++ + + S A +I V + + ++
Sbjct: 203 YVAGEGASAYQVHDSAVITIGDHARLDYVRIVEDSREAFNITSATVAVGAHAHFNAFGIT 262
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
TGG SR+ V G +E E + +LL Q D + L+++H +C R+ + +V
Sbjct: 263 TGGLASRYQAVVTVAGSHSEVETNGVNLLNGKQHAD--TTLVMNHDVPHCVSREGFRAVV 320
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
G +VF G + V + AQQTDA +TR+LLL A V+ KP L+I ADDV C HGAA+
Sbjct: 321 -DDRGHSVFQGRINVRQAAQQTDAKMMTRALLLSDEAEVDNKPELEIFADDVTCGHGAAV 379
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
L++S LFY +ARG+ + A L+ +F E IE ++R V +
Sbjct: 380 GALDDSLLFYLRARGLPQKEAEAMLIRAFVGEAIEAIADDNLRELVTA 427
>gi|417365837|ref|ZP_12138328.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353593374|gb|EHC51141.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
Length = 423
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 197/417 (47%), Gaps = 59/417 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLS------NLPDGV 152
Q S++ L + DA LV +DG F+ QNS ++S L V
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVSVRDERQTLAAPV 121
Query: 153 YVGSLLGVSDGIMKRVSDFISEFQCGD------LFWSINGMGAPDLGVIYVP-----AEG 201
+ L +++ + + V +I + L G+ +L + AEG
Sbjct: 122 HPEVFLHLTESLAQCVM-YIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHLALAEG 180
Query: 202 NDC-------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 248
+ ++ + L + + ++RH L ++ ++ H + T +
Sbjct: 181 AEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDAS 240
Query: 249 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 306
G + RH+ Q G + L+S + V ++ D +R L+H +GYC R
Sbjct: 241 AFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSR 298
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
QLHK IV+ G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVK
Sbjct: 299 QLHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVK 357
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
CSHGA I +++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 358 CSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|392391462|ref|YP_006428065.1| Iron-regulated ABC transporter permease protein SufD
[Ornithobacterium rhinotracheale DSM 15997]
gi|390522540|gb|AFL98271.1| Iron-regulated ABC transporter permease protein SufD
[Ornithobacterium rhinotracheale DSM 15997]
Length = 423
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 119/209 (56%), Gaps = 5/209 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
N+ ++ N+V E+V+G+ ++ QN + + A I Q+ S + +S GGK
Sbjct: 192 NNEPHFTNAVTEIVVGENTQINFYKTQNDTEHTALIDQVFAEQKQGSVVSIDTLSLGGKF 251
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLG 318
+R+ ++ +QLG + + + + L +Q D H+ L++H C +L++ I+
Sbjct: 252 TRNGLNFKQLGENCNSLMQAVSLGEGEQLIDHHT--LVEHTAANCESHELYRTIL-DGKS 308
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ VF+G + V+ AQ+ DA Q ++LL A++N KP L+I ADDVKCSHG + L++
Sbjct: 309 KGVFNGKIIVDPEAQKIDAFQQNNNILLTDDASINTKPQLEIFADDVKCSHGCTVGQLDK 368
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVI 407
LFY Q RGI + A+ L+++F A+V+
Sbjct: 369 DALFYMQQRGIPTKEAQAFLLYAFSADVL 397
>gi|420336220|ref|ZP_14837812.1| feS assembly protein SufD [Shigella flexneri K-315]
gi|391262865|gb|EIQ21877.1| feS assembly protein SufD [Shigella flexneri K-315]
Length = 423
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F E+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAVELTEALRDEGLKQQVLARI 414
>gi|417511240|ref|ZP_12175907.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353643643|gb|EHC87789.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
Length = 423
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|375001526|ref|ZP_09725866.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|417358408|ref|ZP_12133310.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|417383730|ref|ZP_12149333.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|417475437|ref|ZP_12170249.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|417531365|ref|ZP_12186104.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|353076214|gb|EHB41974.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353591299|gb|EHC49603.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|353611056|gb|EHC63837.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|353644276|gb|EHC88274.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|353665001|gb|EHD03264.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
Length = 423
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|375114283|ref|ZP_09759453.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
gi|322714429|gb|EFZ06000.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
Length = 423
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIYDSALKQQVLARI 414
>gi|183598856|ref|ZP_02960349.1| hypothetical protein PROSTU_02288 [Providencia stuartii ATCC 25827]
gi|386745208|ref|YP_006218387.1| cysteine desulfurase activator complex subunit SufD [Providencia
stuartii MRSN 2154]
gi|188021063|gb|EDU59103.1| FeS assembly protein SufD [Providencia stuartii ATCC 25827]
gi|384481901|gb|AFH95696.1| cysteine desulfurase activator complex subunit SufD [Providencia
stuartii MRSN 2154]
Length = 434
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 125/230 (54%), Gaps = 15/230 (6%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELVEVST 256
+ ++ L V +G + +H L N++ A H + Q +S + L
Sbjct: 207 DKAHFTGGRLTVEVGDNAQYQHFKLNNENNVAQHFAHNDIVVGRDSQVLSSSFLL----- 261
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG L+RH+ Q +G + L+S LL+ ++ + +R L+H G C RQLHK ++A
Sbjct: 262 GGALTRHHTSAQLMGENGHFSLNS--LLLPKDSEIVDTRTYLEHNVGQCESRQLHK-VIA 318
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+AVF+G +KV A +TD +LLL +A V+ KP L+I ADDVKC HGA +
Sbjct: 319 MDGSKAVFNGMIKVAPNALKTDGQMSNHTLLLGDKAEVDTKPQLEIYADDVKCGHGATVG 378
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
+++ QLFY ++RGID + A+ ++ +F AE+ E ++ V+++++
Sbjct: 379 RIDDEQLFYLRSRGIDGKAAKHMIIIAFAAELTESIENEELKQAVMANIR 428
>gi|62179962|ref|YP_216379.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62127595|gb|AAX65298.1| required for stability of iron-sulfur component of FhuF [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 423
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIYDSALKQQVLARI 414
>gi|124024848|ref|YP_001013964.1| ABC transporter, membrane component [Prochlorococcus marinus str.
NATL1A]
gi|123959916|gb|ABM74699.1| ABC transporter, membrane component [Prochlorococcus marinus str.
NATL1A]
Length = 412
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 121/233 (51%), Gaps = 5/233 (2%)
Query: 180 LFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQ-NQSLNAAHIKW 238
+F+ I DL I++ G + N ++E+ + + H ++ + ++ I
Sbjct: 166 IFFLIEEGAKLDLLQIFL---GKNNSAQNHLIEIKLEAQAEFTHGFISLGEEKESSSICT 222
Query: 239 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 298
AV Q S Y L + G +R + Q + T + + S + HS +
Sbjct: 223 LAVDQSEKSKYSLHSIHHGWDYARFEPRIIQSEGEASTTIKGLQVTKSKEQIATHSLIRF 282
Query: 299 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNL 358
+ P G QL K VA +F+G+++V + AQ+T+A QL+R+LLL RA ++ KP L
Sbjct: 283 EGPNGKLDQLQKA-VASEYSHCIFNGSIEVPQKAQKTEAAQLSRNLLLSKRARIDTKPEL 341
Query: 359 QIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+I+ADDV+C+HGA +S L++ +LFY +RGID + A L+ + EVI FP
Sbjct: 342 EIVADDVRCTHGATVSQLQDEELFYLLSRGIDKQCANSLLLQGYYDEVISHFP 394
>gi|415815789|ref|ZP_11507220.1| feS assembly protein SufD [Escherichia coli LT-68]
gi|323169994|gb|EFZ55650.1| feS assembly protein SufD [Escherichia coli LT-68]
Length = 423
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++ + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINRLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|224584116|ref|YP_002637914.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224468643|gb|ACN46473.1| hypothetical protein SPC_2357 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 423
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIYDSALKQQVLARI 414
>gi|423108792|ref|ZP_17096487.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5243]
gi|376382986|gb|EHS95714.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5243]
Length = 424
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G ++ ++S + V+++ D SR LDH GYC RQLHK IV
Sbjct: 250 GASVLRHHTSTQLNGENSNLRINSLAMPVNNEVCD--SRTWLDHKVGYCNSRQLHKTIV- 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ G+AVF+G + V ++A +TD +LLL + V+ KP L+I ADDVKCSHGA I
Sbjct: 307 NDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLSEVDTKPQLEIYADDVKCSHGATIG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ QLFY ++RGI + A++ ++++F AE+ E ++R Q+++ +
Sbjct: 367 RIDDEQLFYLRSRGITQQAAQQMILYAFAAELTEAIDDEALRQQILARI 415
>gi|423114812|ref|ZP_17102503.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5245]
gi|376383687|gb|EHS96414.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5245]
Length = 424
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G ++ ++S + V+++ D SR LDH GYC RQLHK IV
Sbjct: 250 GASVLRHHTSTQLNGENSNLRINSLAMPVNNEVCD--SRTWLDHKVGYCNSRQLHKTIV- 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ G+AVF+G + V ++A +TD +LLL + V+ KP L+I ADDVKCSHGA I
Sbjct: 307 NDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLSEVDTKPQLEIYADDVKCSHGATIG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ QLFY ++RGI + A++ ++++F AE+ E ++R Q+++ +
Sbjct: 367 RIDDEQLFYLRSRGITQQAAQQMILYAFAAELTEAIDDEALRQQILARI 415
>gi|349685693|ref|ZP_08896835.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
oboediens 174Bp2]
Length = 424
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y N + ++ + + G + H+ +Q + A H+ + R Y+ ++ G L
Sbjct: 194 GRGQYLHNPLYDIAVAQQGYLSHARIQAEGKQAVHLAVSHARVAAGGVYDSFTLTLGASL 253
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
SRH VH ++ LL Q DL S + P RQ K +++ +
Sbjct: 254 SRHEVHAGLTQAGASVHVNGAQLLSGHQHGDLTSVITHAAPDCVSRQTIKNVLSDQ-ARG 312
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G + V R AQ+TD Q+ ++LLL A ++ KP L+I ADDVKCSHGA + L++ Q
Sbjct: 313 VFQGKILVERIAQKTDGYQMNQALLLSDGAEIDAKPELEIYADDVKCSHGATVGALDDDQ 372
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERF 410
LFY ++RGI TAR L+ +F +V+++
Sbjct: 373 LFYLRSRGIPDATARSILIRAFLHDVVDQI 402
>gi|90424335|ref|YP_532705.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB18]
gi|90106349|gb|ABD88386.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisB18]
Length = 459
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 177/417 (42%), Gaps = 68/417 (16%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
+ LP P+ + R +S + S P+R+ E +++TD ++ + P +
Sbjct: 41 ARLPGSEPVTERRQASFEAYASKGLPNRRIEDWKYTDLRVLMREVLPLAAAPDEAALQRA 100
Query: 125 DAQF--------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--SDGIMKRVSDFISE 174
A LVL+DG S + + L + + SL V DG R +D ++
Sbjct: 101 AAALAQLETRDTTKLVLVDGVFAPSLSDHAGLEAAIEIRSLADVLGDDGNASR-ADLLNI 159
Query: 175 FQCGDLFWSINGMGAPDLGVI--------------------------------------- 195
D S+N A D GV+
Sbjct: 160 KASADAMISLNAAMATD-GVLITVADGASVGKPIHIVHVATQSKAASYTRSFLKLGNGAR 218
Query: 196 ------YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
+V A G Y AN + + +G G ++ H L +L+A +I +
Sbjct: 219 VTFVESFVGAAGAASYQANDAVVIWVGDGAELEHVRLMEDALDAINISTAVFTVGAKAKL 278
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 307
+ +++GG +SR+ V G + +LL Q D + L+L+H +C R+
Sbjct: 279 NTLNLTSGGGVSRYQGFVSIAGEGAHVATNGVNLLKGTQHGD--TTLVLNHVVPHCTSRE 336
Query: 308 LHKCIV---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
+ + ++ AHS VF G + V++ AQ+TDA +TR+LLL A + KP L+I ADD
Sbjct: 337 VFRAVLDGRAHS----VFQGRINVHQPAQKTDAKMMTRALLLSDEAEADNKPELEIFADD 392
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
V C HG+ L+ES LFY +ARG+ + A+ L+ +F E IE +R ++
Sbjct: 393 VTCGHGSTTGALDESLLFYLRARGLSEKDAQSLLIQAFIGEAIESIADDGLRELAIA 449
>gi|268592598|ref|ZP_06126819.1| FeS assembly protein SufD [Providencia rettgeri DSM 1131]
gi|291312012|gb|EFE52465.1| FeS assembly protein SufD [Providencia rettgeri DSM 1131]
Length = 435
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 5/222 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ S L V +G H L ++ A H + S + G L+R++
Sbjct: 211 HMTGSRLTVEVGDNADFSHFKLNIENGQAQHFAHNDIVIGRDSRVKSTSFLLGALLTRNH 270
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
+ G +TE EL+S L ++ D +R L+H +GYC RQLHK I S +AVF
Sbjct: 271 TSARLDGENTEFELNSLLLPKGNEIAD--TRTYLEHNKGYCNSRQLHKVIAMDS-SKAVF 327
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G +KV A +TD +LLL +A ++ KP L+I ADDVKC HGA + +++ QLF
Sbjct: 328 NGMIKVAPNALKTDGQMTNNTLLLGEKAEIDTKPQLEIYADDVKCGHGATVGRIDDEQLF 387
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
Y ++RGI+ + A+ ++ +F AE+ E +++ V+++++
Sbjct: 388 YLRSRGIEGKAAKHMIIIAFAAELTESIESEELKHAVMANIR 429
>gi|253989390|ref|YP_003040746.1| SUF system FeS cluster assembly [Photorhabdus asymbiotica]
gi|253780840|emb|CAQ84002.1| SUF system FeS cluster assembly [Photorhabdus asymbiotica]
Length = 437
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 7/178 (3%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ-TQDLHSRLLLDHPRGYC--RQLHKCIV 313
G L RHN VQ ++E S + L+ Q T+ +R L+H +GYC RQLHK IV
Sbjct: 263 GAALGRHNTSVQ---LNSEGANLSLNSLLLPQGTEVADTRTYLEHNKGYCESRQLHKTIV 319
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+AVF+G +KV +A +TD +LLL +A V+ KP L+I ADDVKCSHGA +
Sbjct: 320 MDQ-SKAVFNGMIKVASHALKTDGQMTNNNLLLGKQAEVDTKPQLEIYADDVKCSHGATV 378
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
+ E QLFY Q+RGI+ A++ +VF+F AE+ E ++ V+ H+K+ + +
Sbjct: 379 GRINEEQLFYLQSRGINQREAQQMIVFAFAAELTEFIEDEVLKAVVMKHIKHRLAGVE 436
>gi|217970310|ref|YP_002355544.1| FeS assembly protein SufD [Thauera sp. MZ1T]
gi|217507637|gb|ACK54648.1| FeS assembly protein SufD [Thauera sp. MZ1T]
Length = 454
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 183/425 (43%), Gaps = 76/425 (17%)
Query: 63 SSSSLPQP-LP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL 120
+++ LP LP L +LR+ + WP+ + E +R T + + + Q + +
Sbjct: 14 TAADLPGADLPWLVRLREDAIDRFADEGWPTTRRENWRHTSLAFM-AQQALAVRETVAPE 72
Query: 121 DVSTD-----------AQFPS-------------LVLIDGFIQNSALNLSNLPDGVYVGS 156
V D AQ P+ +V +DG + + LP GV +GS
Sbjct: 73 AVVADLRARYRAALGTAQDPARKAVESAGDDGHWVVFVDGHFAPALSAIGGLPGGVRIGS 132
Query: 157 LLGVSDGIMKRVSDFISEF-QCGD--------------LFWSINGMGA---PDLGVIYVP 198
L +D + + + F Q GD W G G P + ++++
Sbjct: 133 L---ADALGQTPEAVEAAFGQAGDGEAPAALNAALAADGAWIRLGRGVAVEPPIHLVFLT 189
Query: 199 AEGNDCYWAN---------------------------SVLEVVIGKGGKVRHSYLQNQSL 231
A D + N +V V+ + V H LQ ++
Sbjct: 190 ATVADQHLRNLVVTEPGAQATIVEHYPAGAAGSTLTTAVTRVLAAQDSHVTHLKLQQEAP 249
Query: 232 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 291
A H+ Q + + +S G +L+R+++ + G E L+ + + D
Sbjct: 250 EAIHLATIEAEQARGAVFASHSLSFGARLARNDIRTRLAGEGAEVLLNGLYHADGRRHVD 309
Query: 292 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRAT 351
H+R+ P+G R+ ++ ++ S + VF G + V + AQ+TDA Q +LLL A
Sbjct: 310 HHTRIDHARPQGTSREFYRGLIDGS-ARGVFTGRILVAQDAQRTDAMQRCDNLLLSRLAE 368
Query: 352 VNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+ +P L+I ADDVKC+HGA + L+E LFY ++RG+D AR+ L ++F AEV++R
Sbjct: 369 ADARPELEIYADDVKCAHGATVGQLDEDALFYLRSRGVDAVHARQLLTYAFAAEVLDRIA 428
Query: 412 YPSIR 416
+ +R
Sbjct: 429 HAPLR 433
>gi|406941270|gb|EKD73804.1| hypothetical protein ACD_45C00183G0020 [uncultured bacterium]
Length = 432
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 120/220 (54%), Gaps = 4/220 (1%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
E Y+ N+V ++ V + +Q++ A H+ V Q+ S + ++ G
Sbjct: 202 GEAAQHYFTNAVTDIYTKDNACVEYYKIQDEDSAATHVASLFVNQQQDSQIKTYFLARGC 261
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHS 316
+L+R +V ++Q+ ++ L F+ L S Q + + +DH +G L++ I+A+
Sbjct: 262 QLAREDVQIKQVASGAKSYLHGFYCL-SKNGQHVDHHVQVDHLAAQGESVMLYRGILANK 320
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
+AVF+G V V++ A+Q +A Q +LLL P A VN KP L+I ADDVKC+HGA + L
Sbjct: 321 -SRAVFNGKVYVDQAAKQINAHQANHNLLLSPDAEVNTKPELEIYADDVKCTHGATVGQL 379
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+ LFY ++RGI+ E A K L +F E+ + +IR
Sbjct: 380 DSEALFYLRSRGIETEDALKILTHAFVEEIFNQINDTTIR 419
>gi|406899477|gb|EKD42738.1| hypothetical protein ACD_73C00038G0004 [uncultured bacterium]
Length = 436
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++CYW N+ E+V+ K + +Q +S A H V Q+ +S + G LS
Sbjct: 203 DECYWMNTATEIVLEKNAHLELVQIQKESAKAFHTGSVLVTQKESSVFTHFLAEFGAVLS 262
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ--LHKCIVAHSLGQ 319
R N+ V+ P + F+ L + + D H R+ DH C+ L K ++ + +
Sbjct: 263 RQNIRVELTEPQAVCNIKGFYCLDAKRQADHHVRV--DHLSPQCKSSTLFKGVMDDA-SR 319
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
+F G V V+ A +T+A Q + SLLL A + KP L+I DDVKCSHGA I L+E
Sbjct: 320 GIFRGLVMVHPNASKTEASQTSNSLLLTADAEADPKPQLEIYHDDVKCSHGATIGQLDEE 379
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
LFY ++RGI E AR L +F E++E P +
Sbjct: 380 ALFYLKSRGISDEFARHLLTRAFLEELVESVDLPYV 415
>gi|366157697|ref|ZP_09457559.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. TW09308]
gi|432372100|ref|ZP_19615150.1| FeS cluster assembly protein sufD [Escherichia coli KTE11]
gi|430898429|gb|ELC20564.1| FeS cluster assembly protein sufD [Escherichia coli KTE11]
Length = 423
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+ + Q+FY ++RGI+ + A + ++++F AE+ E ++ QV++ +
Sbjct: 366 RINDEQMFYLRSRGINQQDALQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|373109259|ref|ZP_09523538.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 10230]
gi|423129073|ref|ZP_17116748.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 12901]
gi|423132732|ref|ZP_17120379.1| FeS assembly protein SufD [Myroides odoratimimus CIP 101113]
gi|423328342|ref|ZP_17306149.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 3837]
gi|371645257|gb|EHO10783.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 10230]
gi|371649449|gb|EHO14927.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 12901]
gi|371649899|gb|EHO15374.1| FeS assembly protein SufD [Myroides odoratimimus CIP 101113]
gi|404604778|gb|EKB04394.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 3837]
Length = 439
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 3/230 (1%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
N N+V E+V K V LQN + A + T + Q+ S + S GGKL
Sbjct: 207 NSTVLTNAVTEIVAHKRAIVDFYKLQNDNEEATLVDNTYITQKQESRVSVHTFSFGGKLI 266
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV-AHSLGQA 320
R+N++ Q G ++ L L+ Q D ++ + + P Q +K I +S G
Sbjct: 267 RNNLNFYQDGERIDSTLKGVTLISDKQHVDHYTLVSHNQPNCESHQNYKGIYDGNSTG-- 324
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+G + V++ AQ+TD Q + ++LL +A + KP L+I ADDVKCSHG I L E
Sbjct: 325 VFNGKIYVDKIAQKTDGFQQSNNILLSEKANIYAKPQLEIFADDVKCSHGCTIGQLNEDA 384
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
+FY + RGI + A+ L+++F EV+E P ++++V + +G +
Sbjct: 385 MFYMRQRGIPKKEAKALLMYAFTDEVMESVKVPELKSKVAKVIAGKLGVS 434
>gi|300770537|ref|ZP_07080416.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
gi|300763013|gb|EFK59830.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
Length = 446
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 10/235 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
++ +G+ N V E+V+ + K++H YLQ + + ++ T V QE S Y +
Sbjct: 213 FITLDGSAKNVQNKVTEIVVQENAKLQHYYLQVSASVSHYLNHTEVYQEKYSLYNNYNCN 272
Query: 256 T-GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCI 312
G R++++V+ E+ L +L +Q D H+ ++DH + +C + +K I
Sbjct: 273 FPGASFVRNDINVRLDAEYVESHLYGINLTADNQFVDNHT--VVDHMKPHCESYEWYKNI 330
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
AVF+G + V AQ+T+A Q ++L+ ++TV KP L+I ADDVKCSHG
Sbjct: 331 -PQDTSTAVFNGKIFVREDAQKTNAFQQNNNMLIGDKSTVYTKPQLEIFADDVKCSHGCT 389
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
+ + LFY +ARGI E+AR LV +F +V RF P +R +V+NL+
Sbjct: 390 MGQFDNDALFYLRARGIGEESARLLLVHAFAFDVTTRFSNPVVR----QYVENLV 440
>gi|283785089|ref|YP_003364954.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
gi|282948543|emb|CBG88133.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
Length = 423
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RHN + G + ++S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GDAVLRHNTSTRLNGENATLRINSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E Q+FY ++RGI + A++ ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDEEQMFYLRSRGIRQQDAQQMILYAFAAELTEAISDEALKQQVLARI 414
>gi|337269289|ref|YP_004613344.1| FeS assembly protein SufD [Mesorhizobium opportunistum WSM2075]
gi|336029599|gb|AEH89250.1| FeS assembly protein SufD [Mesorhizobium opportunistum WSM2075]
Length = 422
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 178/401 (44%), Gaps = 49/401 (12%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS------ 108
+L D+ S LP + RD + + + P+R+ E + +TD + ++
Sbjct: 15 ALIDAFGDRLSLLPGDGAVMLKRDDAIEAI-KHGLPTRRVESWHYTDLRRLLNAVPDFDP 73
Query: 109 -----QIQPITRPSSSLDV---STDAQFPSL----------VLIDGFIQNS--------- 141
+ PI S+ L V +DA+ P++ L DG I
Sbjct: 74 AAAPKAVGPIVEGSAVLAVLNGKSDAKMPAVDGVTVERLSEKLTDGSIAPGLDPYGSDDA 133
Query: 142 --ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD---LFWSINGMGAPDLGVIY 196
ALN + + DG +V ++DG + Q G + + +GA VI
Sbjct: 134 IGALNTAFVADGYFVD----IADGAELEKPIELQNLQAGGQTHVRLPVR-VGAGAKAVIV 188
Query: 197 VPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 256
G +SV ++V+G+G V +Q Q A H+ + L ++
Sbjct: 189 ERQAGEGAALTSSVSQLVLGEGADVTWLIVQEQPETATHLAQFKAHIGKDAKLTLFVMNA 248
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVA 314
GG+L R + V+ G + +L +LL D D+ ++LDH P ++ + +V
Sbjct: 249 GGRLVRQEIVVRTTGEGADFKLRGINLLAGDTHTDV--TMVLDHAVPHTTSTEIVRNVVT 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ VF G + V++YAQ+T+A +LLL + KP L+I ADDV C HGA ++
Sbjct: 307 GK-ARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVVCGHGATVT 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
+++ LFY ARG+D ++AR LV +F AEVIE +I
Sbjct: 366 EIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDEAI 406
>gi|387815488|ref|YP_005430978.1| FeS assembly protein SufD [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381340508|emb|CCG96555.1| FeS assembly protein SufD [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 428
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 185/422 (43%), Gaps = 60/422 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SLP+PL LR + L+ P P+RK E ++++ + +K + I+ P+
Sbjct: 12 LHPAGESLPEPL--LALRKERASALVDMPLPTRKTENWKYS-SKYLKLADDMAISLPAEG 68
Query: 120 LDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC 177
P +V I+G + A +L DG+ + S +++G + +S +
Sbjct: 69 -KTGNSLAVPGYKVVFINGVMIPEASEYPDL-DGIEILSFNDLANGEAEALSAKLGSTLN 126
Query: 178 GDL--FWSINGMGAPDLGV-------------------------------IYVPA----- 199
D F +NG D G+ IYV A
Sbjct: 127 HDQVQFARLNGARFED-GLFIRLKPGAVLDQPLFIIHETSADASGSAYPRIYVEAGANSQ 185
Query: 200 ---------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 250
G ++V E + G V L + N HI T V Q+ +S +E
Sbjct: 186 LTLVEEYTSSGEASALVSTVTEFNLADGANVTSIRLNMEGENVQHIGATGVLQQRSSRFE 245
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 308
V GG L RH++ V+ G ET+L+ + Q D H+ + DH +C +
Sbjct: 246 SHCVGFGGPLRRHDLQVRLEGEGAETKLNGVVVTQGKQHYDNHTSI--DHVAAHCNSEET 303
Query: 309 HKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCS 368
++ I A AVF+G + +++ AQ+++A ++LLL A ++ KP L+I ADDVKC+
Sbjct: 304 YRNIAADQ-SHAVFNGRIHIHQDAQKSNADMNNKNLLLSNGAEIDTKPELEIYADDVKCA 362
Query: 369 HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
HGA I L+E+ +FY +RGI A L +F E++++ P ++R + + +
Sbjct: 363 HGATIGQLDETSVFYLVSRGIGRRQANVLLTMAFINELVQQIPVEAVRETAQARLSDFFE 422
Query: 429 TT 430
T
Sbjct: 423 QT 424
>gi|149376034|ref|ZP_01893800.1| FeS assembly protein SufD [Marinobacter algicola DG893]
gi|149359671|gb|EDM48129.1| FeS assembly protein SufD [Marinobacter algicola DG893]
Length = 428
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 180/410 (43%), Gaps = 62/410 (15%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L SLP+PL +LR L+ P P+RK E ++++ + + ++ T P++
Sbjct: 12 LEPGGHSLPEPL--LELRKQRGTALVDMPLPTRKTENWKYSSRHLKLTDEL-ATTLPATG 68
Query: 120 LD------------------VSTDAQFPSL--VLIDGF---------------------- 137
D + + FP L + I F
Sbjct: 69 KDGYSLSIPGYRVVFHNGVMIPEASDFPDLDGIRIQRFADLDDDEAAALAERLDNTLDTR 128
Query: 138 -IQNSALNLSNLPDGVYV----GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDL 192
+Q + LN + DG+Y+ ++L I+ V+ S G + I A
Sbjct: 129 AVQMARLNSARFEDGLYIQLDKEAVLDQPLFIVHEVTGTAS----GSAYPRIYVDAARHS 184
Query: 193 GVIYVP---AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
+ V + G + ++V E V+ G +V + L + N HI T VRQ S +
Sbjct: 185 QITVVEEYLSSGEEPVMVDTVTEFVLADGAQVTNVRLVMEGENVQHIGATGVRQAANSRF 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 307
E V GG L RH++ V+ G E +L+ + Q D H+ + +H +C +
Sbjct: 245 ESHCVGFGGPLRRHDLQVRLEGEGGECKLNGVVVTQGKQHYDNHTSI--EHVAAHCDSEE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
++ I A AVF+G + ++ AQ+++A ++LLL A ++ KP L+I ADDVKC
Sbjct: 303 TYRNIAADE-SHAVFNGRIHIHEDAQKSNANMNNKNLLLSTGAEIDTKPELEIYADDVKC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
+HGA I L+ LFY +RGI A L +F E++E+ P ++++
Sbjct: 362 AHGATIGQLDRISLFYLVSRGIGRREANTLLTMAFINELVEQIPVQAVKD 411
>gi|384097324|ref|ZP_09998445.1| FeS assembly protein SufD [Imtechella halotolerans K1]
gi|383837292|gb|EID76692.1| FeS assembly protein SufD [Imtechella halotolerans K1]
Length = 438
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 117/216 (54%), Gaps = 7/216 (3%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
NSV E+ K V + +QN S +A+ I T + Q+ S + S GG ++R+N++
Sbjct: 211 TNSVTEIFANKNAIVDYYKIQNDSKSASLIDNTFISQQRHSHASVHTFSFGGNITRNNLN 270
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVA-HSLGQAVFD 323
E+ L ++ Q D ++ L+DH + C Q +K I + S+G VF+
Sbjct: 271 FFHKDEHIESTLKGVTIIGDKQHVDHYT--LVDHAQPNCESHQDYKGIFSDKSVG--VFN 326
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G +KV + AQ+T+A Q ++LL+ AT+N KP L+I ADDVKCSHG I L+E LFY
Sbjct: 327 GKIKVEKEAQKTNAFQQNNNILLDDTATINTKPQLEIFADDVKCSHGCTIGQLDEDALFY 386
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
RGI + A+ L + F V+E P ++ ++
Sbjct: 387 LLTRGIPRKEAQALLTYGFANNVLESVKIPEVKERI 422
>gi|293446055|ref|ZP_06662477.1| FeS assembly protein SufD [Escherichia coli B088]
gi|291322885|gb|EFE62313.1| FeS assembly protein SufD [Escherichia coli B088]
Length = 423
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQL+K IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLYKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|417415917|ref|ZP_12159460.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353621341|gb|EHC71184.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
Length = 423
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAVVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|108803021|ref|YP_642958.1| Iron-regulated ABC transporter permease SufD [Rubrobacter
xylanophilus DSM 9941]
gi|108764264|gb|ABG03146.1| Iron-regulated ABC transporter permease protein SufD [Rubrobacter
xylanophilus DSM 9941]
Length = 453
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 124/237 (52%), Gaps = 8/237 (3%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
Y +G + +N +E+ +G+G +++ LQN + N H + E + + VS
Sbjct: 213 YASEDGEEPALSNGAVELFVGQGAHLQYVSLQNWARNVVHFNTIRSQAEKDATINSLVVS 272
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHK-CI 312
G +LSR NV P +++E+ + DQ D H+ L DH P+ + L+K +
Sbjct: 273 FGAQLSRTNVEAGLTAPGSDSEMLGLYFADEDQLIDHHT--LQDHIAPQAHSDLLYKGAL 330
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVK-PNLQIIADDVKCSHGA 371
SL VF G ++V AQ+TDA Q R+L+L + V PNL+I+ADDVKCSHGA
Sbjct: 331 RDESL--TVFSGLIRVEPGAQKTDAYQTNRNLILGTDEAMAVSLPNLEIMADDVKCSHGA 388
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+++ +LFY +RGI A K +VF F EV R P ++ ++ ++ +G
Sbjct: 389 TTGQVDDLELFYLMSRGIPRIEAEKLVVFGFFGEVTSRIPLRGLKEKLDRAIEEKIG 445
>gi|358447747|ref|ZP_09158263.1| FeS assembly protein SufD [Marinobacter manganoxydans MnI7-9]
gi|385332727|ref|YP_005886678.1| FeS assembly protein SufD [Marinobacter adhaerens HP15]
gi|311695877|gb|ADP98750.1| FeS assembly protein SufD [Marinobacter adhaerens HP15]
gi|357228100|gb|EHJ06549.1| FeS assembly protein SufD [Marinobacter manganoxydans MnI7-9]
Length = 428
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 182/410 (44%), Gaps = 58/410 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SLP+PL LR L+ P P+RK E ++++ + +K + I+ P+
Sbjct: 12 LHPAGQSLPEPL--LALRKQRGTALVDMPLPTRKTENWKYS-SKYLKLTDDMAISLPADG 68
Query: 120 LDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI----- 172
+ P + ++G + A +L DG+ + S +SD ++D +
Sbjct: 69 -KTGSGLAVPGYKVAFLNGVMMPEACEYPDL-DGISIKSFGDLSDEEASDLADRLDSTLD 126
Query: 173 -----------SEFQCGDL------------FWSINGMGAPDLGV----IYVPA------ 199
+ F+ G L + ++ + A G I+V A
Sbjct: 127 NKAVQMARLNSARFEDGLLIRLKPDAVLDQPLFIVHEVTAEASGSAFPRIFVDAGRHSQI 186
Query: 200 --------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
G+ N+V E + G + L + N HI T V Q+ +S +E
Sbjct: 187 TLVEEYISSGSAQVMVNTVTEFNVADGANITSIRLNMEGENVQHIGSTGVLQQRSSRFES 246
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLH 309
V GG L RH++ V+ G E +L+ + Q D H+ ++H +C + +
Sbjct: 247 HTVGFGGPLRRHDLQVRLEGEGAECKLNGVVVTQGKQHYDNHT--TIEHVAAHCNSEETY 304
Query: 310 KCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
+ I A AVF+G + +++ AQ+++A ++LLL A ++ KP L+I ADDVKC+H
Sbjct: 305 RNIAADQ-SHAVFNGRIHIHQDAQKSNADMNNKNLLLSNGAEIDTKPELEIYADDVKCAH 363
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
GA I L+E LFY +RGI A L +F E++E+ P ++R V
Sbjct: 364 GATIGQLDEISLFYLVSRGIGRRQANVLLTMAFINELVEQIPVEAVRETV 413
>gi|407780042|ref|ZP_11127290.1| hypothetical protein NA2_18695 [Nitratireductor pacificus pht-3B]
gi|407298172|gb|EKF17316.1| hypothetical protein NA2_18695 [Nitratireductor pacificus pht-3B]
Length = 422
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 185/416 (44%), Gaps = 48/416 (11%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----- 109
+L DS S LP + RD + + LL PSR+ E + +TD + SS
Sbjct: 15 ALIDSFAGRVSELPGDAAVTVRRDEALE-LLKNGLPSRRVEAWHYTDLRRLLSSVPAFKP 73
Query: 110 ------IQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA---LNLSNLPDGVY------- 153
+ P+ S+ L V A IDG ++ L + DG+
Sbjct: 74 VSEAEPVAPLIERSAVLAVLGGAAVDRNTGIDGVTVSTVADRLIEGGMTDGLAAAEPHDA 133
Query: 154 VGSLLG--VSDGIMKRVSDFISEFQCGDL-----------FWSINGMGAPDLGVIYVPAE 200
VG++ VSDG + +++ + + +L +S+ ++ A
Sbjct: 134 VGAINAAFVSDGYVIDIAEGANLDRAIELQNLHTGGQAHSRFSVKAAAGAKATIVERQA- 192
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ +S+ ++ + +V LQ Q A+++ + R + L +++GGKL
Sbjct: 193 GDGEALVSSISDLDVADDAEVLWIVLQEQPDTASYLGRFSARLGKNAKLTLFVMNSGGKL 252
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
R V V+ G +E L +LL + D+ ++LDH P Y + + +V
Sbjct: 253 VRQEVRVEAAGEGSEFRLRGVNLLAGEAHCDV--TMVLDHIAPDTYSTETLRNVVT-GRA 309
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
VF G ++V R AQ+TDA +LLL + KP L+I ADDV C HGA +++++
Sbjct: 310 NGVFQGQIRVARDAQKTDAKMACNTLLLSDDGGFSAKPELEIFADDVACGHGATVTEIDG 369
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDVSF 434
+ LFY ARGID +TAR LV +F AEVIE ++ V+ L G D F
Sbjct: 370 NHLFYLMARGIDEKTARGLLVKAFVAEVIEELDDEAV-------VEALEGKLDAWF 418
>gi|422008416|ref|ZP_16355400.1| cysteine desulfurase activator complex subunit SufD [Providencia
rettgeri Dmel1]
gi|414094889|gb|EKT56552.1| cysteine desulfurase activator complex subunit SufD [Providencia
rettgeri Dmel1]
Length = 435
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 5/222 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ S L V +G H L ++ A H + S + G L+R++
Sbjct: 211 HMTGSRLTVEVGDNADFSHFKLNVENGQAQHFAHNDIVIGRDSRVKSTSFLLGALLTRNH 270
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
+ G +TE EL+S L ++ D +R L+H +GYC RQLHK I S +AVF
Sbjct: 271 TSARLDGENTEFELNSILLPKGNEIAD--TRTYLEHNKGYCNSRQLHKVIAMDS-SKAVF 327
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G +KV A +TD +LLL +A ++ KP L+I ADDVKC HGA + +++ QLF
Sbjct: 328 NGMIKVAPNALKTDGQMTNNTLLLGEKAEIDTKPQLEIYADDVKCGHGATVGRIDDEQLF 387
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
Y ++RGI+ + A+ ++ +F AE+ E +++ V+++++
Sbjct: 388 YLRSRGIEGKAAKHMIIIAFAAELTESIESEELKHAVMANIR 429
>gi|329114665|ref|ZP_08243424.1| FeS cluster assembly protein SufD [Acetobacter pomorum DM001]
gi|326696145|gb|EGE47827.1| FeS cluster assembly protein SufD [Acetobacter pomorum DM001]
Length = 427
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y+ N V+EV +G+ K+ H+ LQ + A + T V+ Y + GG LSRH
Sbjct: 199 YFHNPVMEVTVGERAKLYHTTLQTEGPQAIALATTYVQVAGHGVYNSFALGLGGLLSRHE 258
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV-AHSLGQAV 321
VH + P + ++ L Q D+ S ++ H C RQ + ++ H+ G V
Sbjct: 259 VHARLKAPHAQLHVNGAQNLAEHQVGDITS--VITHAASDCTSRQTVRNVLDGHARG--V 314
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G V V + AQ+TD Q+ ++LLL A ++ KP L+I ADDV+CSHGA + L++ QL
Sbjct: 315 FQGKVLVEQVAQKTDGYQMNQALLLSENAEIDAKPELEIYADDVRCSHGATVGALDDDQL 374
Query: 382 FYFQARGIDLETARKALVFSFGAEVI 407
FY ++RG+ AR+ L+ +F E +
Sbjct: 375 FYMRSRGVPEAQARQILIAAFLDEAL 400
>gi|72383270|ref|YP_292625.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus str. NATL2A]
gi|72003120|gb|AAZ58922.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus str. NATL2A]
Length = 412
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 121/233 (51%), Gaps = 5/233 (2%)
Query: 180 LFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQ-NQSLNAAHIKW 238
+F+ I DL I++ G + N ++E+ + + H ++ + ++ I
Sbjct: 166 IFFLIEEGAKLDLLQIFL---GKNNSAQNHLIEIKLEAEAEFTHGFISLGEEKESSSICT 222
Query: 239 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 298
AV Q S Y L + G +R + Q + T + + S + HS +
Sbjct: 223 LAVDQSEKSKYSLHSIHHGWDYARFEPRIIQSEGEASTIIKGLQVTKSKEQIATHSLIRF 282
Query: 299 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNL 358
+ P G QL K VA +F+G+++V + AQ+T+A QL+R+LLL RA ++ KP L
Sbjct: 283 EGPNGKLDQLQKA-VASEYSHCIFNGSIEVPQKAQKTEAAQLSRNLLLSKRARIDTKPEL 341
Query: 359 QIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+I+ADDV+C+HGA +S L++ +LFY +RGID + A L+ + EVI FP
Sbjct: 342 EIVADDVRCTHGATVSQLQDEELFYLLSRGIDKQCANSLLLQGYYDEVISHFP 394
>gi|386704588|ref|YP_006168435.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli P12b]
gi|383102756|gb|AFG40265.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli P12b]
Length = 423
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++ GI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSHGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|162148828|ref|YP_001603289.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
gi|161787405|emb|CAP57000.1| putative FeS assembly protein SufD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 430
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 162/386 (41%), Gaps = 54/386 (13%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS------------SQIQPITRPSSSLDVST 124
RD ++ L ++ P E +++T + S + I + + +
Sbjct: 37 RDRAAALLRASGLPRTGVEAWKYTSLRALADIPFAAAPARPDMSAVHAIV-AETEREFAL 95
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL------------------LGVSDGIMK 166
DA P V++DG + LS LPDGV V L L DG++
Sbjct: 96 DADLPRAVVVDGRFDAA---LSRLPDGVTVTRLTARDESPPYDDVATALNTLLADDGLVL 152
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGV---------------IYVPAEGNDCYWANSVL 211
V + + L S+ + L V + A G Y N V
Sbjct: 153 HVGPGVDAGRM--LLLSVTVADSAPLSVHPRHRIVLDQGARLSVLDLAVGRGAYLHNPVF 210
Query: 212 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 271
++ + + H+ LQ + A H+ + Y+ ++ G L+RH VH +
Sbjct: 211 DITVADNAALIHAKLQAEDPAAQHLAVIHAEVGAGASYDSFTLTLGASLARHEVHARLAA 270
Query: 272 PDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 330
++ LL Q DL S + P RQ K +++ H+ G VF G + V R
Sbjct: 271 EGGIVHVNGAQLLDGRQVADLTSVITHAAPACNSRQTVKNVLSGHARG--VFQGKILVER 328
Query: 331 YAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGID 390
AQ+TD Q+ ++LLL A ++ KP L+I ADDV+CSHGA + L+ QLFY ++RG+
Sbjct: 329 IAQKTDGYQMNQALLLSDTAEIDAKPELEIYADDVRCSHGATVGALDPDQLFYLRSRGVA 388
Query: 391 LETARKALVFSFGAEVIERFPYPSIR 416
AR LV +F + +E S+R
Sbjct: 389 EHEARAILVKAFLHDAVELIGDESLR 414
>gi|227539029|ref|ZP_03969078.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
gi|227241085|gb|EEI91100.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
Length = 446
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 10/235 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
++ +G+ N V E+V+ + K++H YLQ + + ++ T V QE S Y +
Sbjct: 213 FITLDGSAKNVQNKVTEIVVQENAKLQHYYLQVSASVSHYLNHTEVYQEKYSLYNNYNCN 272
Query: 256 T-GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCI 312
G R++++V+ E+ L +L +Q D H+ ++DH + +C + +K I
Sbjct: 273 FPGASFVRNDINVRLDAEYVESHLYGINLTADNQFVDNHT--VVDHMKPHCESYEWYKNI 330
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
AVF+G + V AQ+T+A Q ++L+ ++TV KP L+I ADDVKCSHG
Sbjct: 331 -PQDTSTAVFNGKIFVREDAQKTNAFQQNNNMLIGDKSTVYTKPQLEIFADDVKCSHGCT 389
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
+ + LFY +ARGI E+AR LV +F +V RF P +R +V+NL+
Sbjct: 390 MGQFDNDALFYLRARGIGEESARLLLVHAFAFDVTTRFSNPLVR----QYVENLV 440
>gi|92117849|ref|YP_577578.1| FeS assembly protein SufD [Nitrobacter hamburgensis X14]
gi|91800743|gb|ABE63118.1| Iron-regulated ABC transporter permease protein SufD [Nitrobacter
hamburgensis X14]
Length = 441
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 118/230 (51%), Gaps = 11/230 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+V A+ Y A+ L V +G G V H L + +A +I V + L ++
Sbjct: 207 FVAADDAKSYQAHDALIVAVGDGADVAHIRLMADADDATNISSAIVTVGGEAKLNLFSLT 266
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
+GG+LSR+ V G ++ + LL Q D+ L++DH +C R++ + +V
Sbjct: 267 SGGRLSRYQVFATLEGEGSDVFFNGVSLLKDTQHADM--TLVVDHAVPHCTSREVFRAVV 324
Query: 314 ---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
AHS VF G + V AQ+TD +TR+LLL A + KP L+I ADDV C HG
Sbjct: 325 DDRAHS----VFQGKIIVRPDAQKTDGKMMTRALLLSDGAEADSKPELEIFADDVTCGHG 380
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVV 420
A I L++S LFY +ARG+ + A+ L+ +F E IE +R+ +
Sbjct: 381 ATIGALDDSLLFYLRARGLSEKEAQALLIQAFVGEAIESIADDGLRDVAI 430
>gi|228471669|ref|ZP_04056442.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
gi|228276822|gb|EEK15517.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
Length = 433
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 114/225 (50%), Gaps = 5/225 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N V E + K + + LQN SL A+ I T + QE S + S GG L+R+N++
Sbjct: 209 NVVTEAFVAKEAFLDYYKLQNDSLTASLIDNTYISQEANSHASVHTFSFGGTLTRNNLNF 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGN 325
G E+ L +L Q D ++ L++H P Q +K IV+ VF+G
Sbjct: 269 YHQGEYLESTLKGLSILKGTQHTDHYT--LVNHACPNCESHQDYKSIVSDE-ATNVFNGK 325
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V + AQ+T+A Q ++LL +ATV KP L+I ADDVKCSHG + L LFY Q
Sbjct: 326 IMVEQIAQKTNAYQQNDNILLSDKATVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQ 385
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
RGI + A L ++F V+E P++ + + +G T
Sbjct: 386 TRGIGKKEAAALLTYAFANTVLESVKIPALSEHINQIIAEKLGVT 430
>gi|416507520|ref|ZP_11735468.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416524104|ref|ZP_11741317.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416528381|ref|ZP_11743831.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416535727|ref|ZP_11747981.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416554035|ref|ZP_11758063.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416563010|ref|ZP_11762596.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416571481|ref|ZP_11766715.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|417462636|ref|ZP_12164570.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|353631504|gb|EHC78794.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|363549030|gb|EHL33388.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363553530|gb|EHL37778.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363553698|gb|EHL37944.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363562221|gb|EHL46327.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363565935|gb|EHL49959.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363572214|gb|EHL56107.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|363574011|gb|EHL57884.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
Length = 423
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ Q+++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQMLARI 414
>gi|225010410|ref|ZP_03700882.1| FeS assembly protein SufD [Flavobacteria bacterium MS024-3C]
gi|225005889|gb|EEG43839.1| FeS assembly protein SufD [Flavobacteria bacterium MS024-3C]
Length = 438
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 123/227 (54%), Gaps = 3/227 (1%)
Query: 203 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
+ + N+V E+ K + +QN + +A+ + T + Q + S L S GGK++R
Sbjct: 207 NAVFTNAVTEIFAAKSAIIDFYKVQNDNNSASLVDNTYIDQHSQSVVTLHTFSFGGKMTR 266
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV-AHSLGQAV 321
+N++ Q G ++ + ++ Q D H+ + P Q +K I +S G V
Sbjct: 267 NNLNFYQNGERIDSTMKGVTIIGDGQHVDHHTLVHHIQPNCESHQDYKGIYDGNSTG--V 324
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G + V+R AQ+T+A Q +LL+ ++++N KP L+I ADDVKCSHG I L+ L
Sbjct: 325 FNGKIMVDRLAQKTNAFQQNNNLLISDKSSINTKPQLEIFADDVKCSHGCTIGQLDHDAL 384
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
FY Q+RGI + A+ L+++F V+E P ++ +V + + +G
Sbjct: 385 FYLQSRGIGKKEAQALLMYAFANNVLESVRIPELKKRVNALIAEKLG 431
>gi|213612669|ref|ZP_03370495.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 421
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 247 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 304
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V +++ +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 305 DK-GRAVFNGLINVAQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 363
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 364 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 412
>gi|407976243|ref|ZP_11157144.1| FeS assembly protein SufD [Nitratireductor indicus C115]
gi|407428418|gb|EKF41101.1| FeS assembly protein SufD [Nitratireductor indicus C115]
Length = 422
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 184/404 (45%), Gaps = 55/404 (13%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L DS + S LP RD + + LL P+R+ E + +TD + S T
Sbjct: 15 ALIDSFAARISDLPGDAETTVHRDDALE-LLKAGLPTRRVEAWHYTDLRRLLS------T 67
Query: 115 RPSSSLDVSTDAQFPSLV-------LIDGFIQN-----SALNLSNLPDGVYVGSL---LG 159
P+ + S+ AQ L+ +++G S + +S L D + G L LG
Sbjct: 68 VPAYRFE-SSAAQVAPLIDRAELLPVLNGAANTQRGGISGVAVSRLADRLIEGDLTSKLG 126
Query: 160 VSD---GIMKRVSDFISEFQCGDL-----------FWSING-----------MGAPDLGV 194
V+D + + F+S+ C ++ F +++ GA
Sbjct: 127 VADPYDTVAAINAAFVSDGYCLEIEDGAQIDRPVEFQNVHAGGQVHSRFAVKAGAGSKAT 186
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI-KWTAVRQETASGYELVE 253
I G++ +SV + + +G +V LQ Q +H+ ++TA + A L
Sbjct: 187 IVERQTGSEEALVSSVSHLDVAEGAEVLWIVLQEQPDTVSHLAQFTATLGKDAK-LTLFI 245
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKC 311
++ GGKL R V V G + L +LL + D+ ++LDH P + + +
Sbjct: 246 MNAGGKLVRQEVRVTADGEGSSFRLRGVNLLAGETHCDV--TMVLDHLAPDTFSTETIRN 303
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
IV + VF G ++V R AQ+TDA +LLL + + KP L+I ADDV C HGA
Sbjct: 304 IVTGK-AEGVFQGQIRVARDAQKTDAKMACNTLLLSDEGSFSAKPELEIFADDVACGHGA 362
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
++++E LFY ARGID +TAR LV +F AEVIE ++
Sbjct: 363 TVTEIEADHLFYLMARGIDEKTARGLLVKAFLAEVIEELEDEAV 406
>gi|218294672|ref|ZP_03495526.1| FeS assembly protein SufD [Thermus aquaticus Y51MC23]
gi|218244580|gb|EED11104.1| FeS assembly protein SufD [Thermus aquaticus Y51MC23]
Length = 431
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 180/415 (43%), Gaps = 65/415 (15%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P K R + + P+PSRKDE +R+TD S + + +
Sbjct: 13 SQALGEPAWALKKRLEALEAFARLPYPSRKDENWRYTDLSEAPLDRPVEAPKGLSLTRDT 72
Query: 109 QIQPITRPSSSLDVST----------DAQFPSLVLIDGFIQNSALNLSNL-PDGVYVGSL 157
+ + R DV+ A+ P + G + S L P+ V G
Sbjct: 73 LPEAVKRRLEKTDVAAFLVFVGPDLVYAEVPEELKAQGLVLTSLAEAMRLHPEKVEAGLF 132
Query: 158 LGV--SDGIMKRVSDFISEFQCGDLFWSINGMGAPD-LGVIYVPAEGNDCYWANSVL--- 211
V D + S F F G + G+ +GV V EG+ S+L
Sbjct: 133 QAVFTEDKFAAQNSAF---FTHGAFLYVPAGLELEKPVGVFKVLLEGSKASAGRSLLFLE 189
Query: 212 -------------------------EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
E+V+ G ++RH++++ H E
Sbjct: 190 DNAKAAYIEEYLSPDLPPTLHLSATEMVLRPGARLRHAHVETFGNGVWHFHRQRALLERD 249
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 306
+G + V+ GG +R V + LGP +E+E+ + Q D ++ L H + R
Sbjct: 250 AGLNDLVVNLGGAYARSEVASELLGPGSESEMLGLYFGHGRQQFDHYT--LQHHVEHHTR 307
Query: 307 Q--LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
L+K V +AVF G +++ R AQ+TDA Q R+L+L P A V+ P L+I A+D
Sbjct: 308 SDLLYKGAVKDE-ARAVFSGLIRLERGAQKTDAYQANRNLILSPTARVDSIPQLEIGAND 366
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
V+C+HG+ + ++E+QLFY Q+RG+ A++ LV + A+V+ R P ++R +
Sbjct: 367 VRCTHGSTTAPVDETQLFYLQSRGLPRTLAQELLVKAHLADVLTRIPLKALRAHI 421
>gi|363582469|ref|ZP_09315279.1| FeS assembly protein SufD [Flavobacteriaceae bacterium HQM9]
Length = 437
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 1/223 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NSV E+ GK V + +QN + A I T Q + S + + GG+++R+N+
Sbjct: 209 FTNSVTEIYTGKNAHVDYYKIQNDTDTATLIDNTFAEQHSNSLCSVHTFAFGGEITRNNL 268
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ Q G ++ L+ +L D ++ + P Q +K I VF+G
Sbjct: 269 NFFQKGQGIDSILNGVTILEGKAHVDHNTLVEHQQPNCESHQDYKGIFDEK-STGVFNGK 327
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V++ AQ+T+A Q ++LL +ATVN KP L+I ADDVKCSHG I L+ES LFY +
Sbjct: 328 IIVDQEAQKTNAFQSNNNILLSDKATVNSKPQLEIFADDVKCSHGCTIGQLDESALFYMR 387
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+RGI + A+ L+++F V+E P ++ ++ + +G
Sbjct: 388 SRGIAPKEAKALLMYAFANNVLETVKVPQLKTRINKIIAKKLG 430
>gi|416268376|ref|ZP_11642113.1| Iron-sulfur cluster assembly protein SufD [Shigella dysenteriae CDC
74-1112]
gi|420380186|ref|ZP_14879653.1| feS assembly protein SufD [Shigella dysenteriae 225-75]
gi|320175142|gb|EFW50253.1| Iron-sulfur cluster assembly protein SufD [Shigella dysenteriae CDC
74-1112]
gi|391302482|gb|EIQ60339.1| feS assembly protein SufD [Shigella dysenteriae 225-75]
Length = 423
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + R+N Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRNNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDEGLKQQVLARI 414
>gi|385788274|ref|YP_005819383.1| FeS assembly protein SufD [Erwinia sp. Ejp617]
gi|310767546|gb|ADP12496.1| FeS assembly protein SufD [Erwinia sp. Ejp617]
Length = 426
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RH+ + G ++ ++S L + + D SR L+H +GYC RQLHK IV
Sbjct: 252 GAGLTRHHTSTRLNGEGSDLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV- 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKC HGA I
Sbjct: 309 RDRARAVFNGIIKVAKHALKTDGQMSNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIG 368
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E Q+FY ++RGID A++ ++++F AE+ E +++ V+ +
Sbjct: 369 RIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDETLKEAVIQRI 417
>gi|340621063|ref|YP_004739514.1| hypothetical protein Ccan_02850 [Capnocytophaga canimorsus Cc5]
gi|339901328|gb|AEK22407.1| UPF0051 protein [Capnocytophaga canimorsus Cc5]
Length = 432
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 119/224 (53%), Gaps = 5/224 (2%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
NSV E+ + + + +QN + A+ I T + Q+ S + S GG L+R+N++
Sbjct: 207 TNSVTEIFVEDNALLDYYKVQNDNQQASLIDNTYISQQKNSNASVHTFSFGGALTRNNLN 266
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDG 324
G E+ L +L +Q D ++ L++H + C Q +K I++ VF+G
Sbjct: 267 FFHHGEHLESTLKGITILSDNQHVDHYT--LVNHAQPNCESHQDYKTILSDK-SAGVFNG 323
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V + AQ+T+A Q ++LL +A +N KP L+I ADDVKCSHG + +L + LFY
Sbjct: 324 KIMVEKIAQKTNAYQQNDTILLSDKANINTKPQLEIFADDVKCSHGCTVGELNKEALFYL 383
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
QARGI + L ++F V++ P++++ V V +G
Sbjct: 384 QARGIPKKEGEALLTYAFANTVLDTIKIPALKDYVSQLVSKKLG 427
>gi|213585085|ref|ZP_03366911.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 345
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 171 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 228
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V +++ +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 229 DK-GRAVFNGLINVAQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 287
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 288 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 336
>gi|37526510|ref|NP_929854.1| cysteine desulfurase activator complex subunit SufD [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36785941|emb|CAE14993.1| SufD protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 438
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L RHN V+ G L+S L + D +R L+H +G+C RQLHK IV
Sbjct: 264 GSGLGRHNTSVKLNGEGANLSLNSLLLPQGKEVAD--TRTYLEHHKGHCESRQLHKTIVM 321
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+AVF+G +KV +A +TD +LLL +A V+ KP L+I ADDVKCSHGA +
Sbjct: 322 -DQSKAVFNGMIKVAPHALKTDGQMTNNNLLLGKQAEVDTKPQLEIYADDVKCSHGATVG 380
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
++E QLFY Q+RGI A +VF+F AE+ E S++ V++H+K+ + +
Sbjct: 381 RIDEEQLFYLQSRGISRRDAEHMMVFAFAAELTESIEDESLKAIVMNHIKHRLARVE 437
>gi|16760535|ref|NP_456152.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29141704|ref|NP_805046.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213428570|ref|ZP_03361320.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213649927|ref|ZP_03379980.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213852801|ref|ZP_03382333.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289825918|ref|ZP_06545077.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|378959406|ref|YP_005216892.1| FeS cluster assembly protein sufD [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|25513159|pir||AH0702 conserved hypothetical protein STY1751 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502831|emb|CAD01993.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137332|gb|AAO68895.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374353278|gb|AEZ45039.1| FeS cluster assembly protein sufD [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 423
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V +++ +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|410085873|ref|ZP_11282587.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
SC01]
gi|409767421|gb|EKN51497.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
SC01]
Length = 434
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 5/238 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
++ + ++ + + +G+ RH L ++ A H + + E
Sbjct: 198 FISPDEQSAHFTGARMTANVGENSDFRHLKLGFENPQAYHFAHNDLVIAAHARVESTSFL 257
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
GGKL+RH+ Q G ++S L + D +R L+H +GYC RQ HK IV
Sbjct: 258 LGGKLTRHHTSTQLNGEGIVLAMNSLVLPKHGEIAD--TRTYLEHNKGYCESRQRHKTIV 315
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ +AVF+G +KV +A +TD +LLL +A ++ KP L+I ADDVKCSHGA +
Sbjct: 316 MDN-SRAVFNGMIKVAPHALKTDGQMTNNNLLLGRKAEIDTKPQLEIYADDVKCSHGATV 374
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
++E QLFY + RGI + A++ ++ +F AE+ + + N V++ ++ + D
Sbjct: 375 GRIDEEQLFYLRTRGIAEKAAKQMIILAFAAELTDAISDEVLNNVVMARIRQSLDQGD 432
>gi|91976930|ref|YP_569589.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
gi|91683386|gb|ABE39688.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
Length = 437
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 117/228 (51%), Gaps = 5/228 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+V EG Y + + +G ++ H L S +A +I VR + Y + V+
Sbjct: 203 FVAGEGAGVYQVHDTAVMTVGDRARLDHVRLIEDSRDAFNIASAEVRVGAHAHYSVAGVT 262
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
TG +SR+ + V G E + +LL Q D + L+++H +C R+ + +V
Sbjct: 263 TGALVSRYQLVVNIAGEYARVETNGVNLLNGKQHAD--TTLVMNHDVPHCVSREGFRAVV 320
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
G +VF G + V + AQQTDA +TR+LLL A + KP L+I ADDV C HGAAI
Sbjct: 321 -DDRGHSVFQGRINVRQPAQQTDAKMMTRALLLSDEAEADNKPELEIFADDVTCGHGAAI 379
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
L++ LFY +ARG+ + A L+ +F E IE ++R ++
Sbjct: 380 GALDDQLLFYLRARGLAEKEAEALLIQAFVGEAIEAIADDNLRELAIA 427
>gi|209545424|ref|YP_002277653.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
gi|209533101|gb|ACI53038.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
Length = 430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 161/385 (41%), Gaps = 52/385 (13%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI-TRP----------SSSLDVSTD 125
RD ++ L ++ P E +++T + RP + + + D
Sbjct: 37 RDRAAALLRASGLPRTGVEAWKYTSLRALADIPFAAAPARPDMAAVHAIVAEAEREFALD 96
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL------------------LGVSDGIMKR 167
A P V++DG + LS LPDGV V L L DG++
Sbjct: 97 ADLPRAVVVDGRFDAA---LSRLPDGVTVTRLTARDELPPYDDVATALNTLLADDGLVLH 153
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGV---------------IYVPAEGNDCYWANSVLE 212
V + + L S+ + L V + A G Y N V +
Sbjct: 154 VGPGVDAGRM--LLLSVTVADSAPLSVHPRHRIVLDQGARLSVLDLAVGRGAYLHNPVFD 211
Query: 213 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 272
+ + + H+ LQ + A H+ + Y+ ++ G L+RH VH +
Sbjct: 212 ITVADNAALIHAKLQAEDPAAQHLAVIHAEVGAGASYDSFTLTLGASLARHEVHARLAAE 271
Query: 273 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNRY 331
++ LL Q DL S + P RQ K +++ H+ G VF G + V R
Sbjct: 272 GGIVHVNGAQLLDGRQVADLTSVITHAAPACNSRQTVKNVLSGHARG--VFQGKILVERI 329
Query: 332 AQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDL 391
AQ+TD Q+ ++LLL A ++ KP L+I ADDV+CSHGA + L+ QLFY ++RG+
Sbjct: 330 AQKTDGYQMNQALLLSDTAEIDAKPELEIYADDVRCSHGATVGALDPDQLFYLRSRGVAE 389
Query: 392 ETARKALVFSFGAEVIERFPYPSIR 416
AR LV +F + +E S+R
Sbjct: 390 HEARAILVKAFLHDAVELIGDESLR 414
>gi|421492060|ref|ZP_15939422.1| YNHC [Morganella morganii subsp. morganii KT]
gi|400193820|gb|EJO26954.1| YNHC [Morganella morganii subsp. morganii KT]
Length = 430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 5/238 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
++ + ++ + + +G+ RH L ++ A H + + E
Sbjct: 194 FISPDEQSAHFTGARMTANVGENSDFRHLKLGFENPQAYHFAHNDLVIAAHARVESTSFL 253
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
GGKL+RH+ Q G ++S L + D +R L+H +GYC RQ HK IV
Sbjct: 254 LGGKLTRHHTSTQLNGEGIVLAMNSLVLPKHGEIAD--TRTYLEHNKGYCESRQRHKTIV 311
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ +AVF+G +KV +A +TD +LLL +A ++ KP L+I ADDVKCSHGA +
Sbjct: 312 MDN-SRAVFNGMIKVAPHALKTDGQMTNNNLLLGRKAEIDTKPQLEIYADDVKCSHGATV 370
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
++E QLFY + RGI + A++ ++ +F AE+ + + N V++ ++ + D
Sbjct: 371 GRIDEEQLFYLRTRGIAEKAAKQMIILAFAAELTDAISDEVLNNVVMARIRQSLDQGD 428
>gi|33860631|ref|NP_892192.1| ABC transporter, membrane component [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633573|emb|CAE18530.1| ABC transporter, membrane component [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 405
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 1/176 (0%)
Query: 241 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 300
V Q+T S Y L + +R + + QL + +T L + ++ ++++ +
Sbjct: 220 VIQKTNSEYSLGSLHFKFDYARFEIRINQLEGNAKTNLKGIQITKNNDQIATYTKMQFNG 279
Query: 301 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQI 360
P G+ Q++K + A AVF+G++ V + AQ+TDA QL+R+LLL A ++ KP L+I
Sbjct: 280 PNGFLDQINKSL-ADDKSHAVFEGSIIVPKIAQKTDASQLSRNLLLSRHAKIDTKPQLEI 338
Query: 361 IADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
IADDVKC HGA IS L E +LFY ++RG+ L A K + S+ EVI P R
Sbjct: 339 IADDVKCKHGATISQLNEEELFYMRSRGLTLAEASKLQLSSYIQEVISSIPISKDR 394
>gi|50120792|ref|YP_049959.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
atrosepticum SCRI1043]
gi|49611318|emb|CAG74765.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 439
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 1/167 (0%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 316
G L+RH+ Q G T ++S L V + D + L + G RQLHK IV +
Sbjct: 259 GAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGNGESRQLHKVIV-ND 317
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
+AVF+G +KV +A +TD +LLL A V+ KP L+I ADDVKCSHGA I +
Sbjct: 318 RARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIGRM 377
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+E QLFY ++RGI + A++ ++F+F AEV E S+R+ V+ +
Sbjct: 378 DEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDAVLERI 424
>gi|383813996|ref|ZP_09969419.1| FeS assembly protein SufD [Serratia sp. M24T3]
gi|383297194|gb|EIC85505.1| FeS assembly protein SufD [Serratia sp. M24T3]
Length = 433
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L IG + H S+ S + AH T R + + G L+
Sbjct: 208 HFTGARLTANIGDNATLSHYKLSFESQASYHFAHNDLTIGRDANVTSNSFL---LGAGLT 264
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RH+ + G + ++S L + + D +R L+H +GYC QLHK IV + +
Sbjct: 265 RHHTSARHNGEGSNLNMNSLLLPMDSELAD--TRTYLEHNKGYCNSHQLHKVIV-NDKAK 321
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G + V + A +TD +LLL +A V+ KP L I ADDVKC HGA I ++E
Sbjct: 322 AVFNGMIYVAKDAIKTDGKMTNNNLLLSDKAEVDTKPQLVIWADDVKCGHGATIGRMDEE 381
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY +ARGI+ AR ++F+F AE+ E ++R V++ +
Sbjct: 382 QLFYLRARGINAFDARNMIIFAFAAELTEAIENETLRKIVIARI 425
>gi|433775690|ref|YP_007306157.1| FeS assembly protein SufD [Mesorhizobium australicum WSM2073]
gi|433667705|gb|AGB46781.1| FeS assembly protein SufD [Mesorhizobium australicum WSM2073]
Length = 435
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 13/280 (4%)
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD---LFWSINGMGAPDLGVIYV 197
ALN + + DG +V ++DG + Q G + ++ +GA VI
Sbjct: 148 GALNTAFVADGYFVD----IADGAELEKPIELQNLQAGGQTHVRLAVR-VGAGAKAVIVE 202
Query: 198 PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
G +SV ++V+G+G +V +Q Q A H+ + L ++ G
Sbjct: 203 RQAGEGAALTSSVSQLVLGEGAEVTWLIVQEQPETATHLAQFKAHIGKNAKLTLFVMNAG 262
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAH 315
GKL R + V+ G + L +LL D D+ ++LDH P ++ + +V
Sbjct: 263 GKLVRQEIMVKTTGEGADFRLRGINLLAGDTHTDV--TMVLDHAVPHTTSTEIVRNVVTG 320
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
+ VF G + V++YAQ+T+A +LLL + KP L+I ADDV C HGA +++
Sbjct: 321 K-ARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVVCGHGATVTE 379
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
++ LFY ARG+D ++AR LV +F AEVIE +I
Sbjct: 380 IDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDETI 419
>gi|422332942|ref|ZP_16413954.1| FeS cluster assembly protein sufD [Escherichia coli 4_1_47FAA]
gi|373246071|gb|EHP65532.1| FeS cluster assembly protein sufD [Escherichia coli 4_1_47FAA]
Length = 423
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGAVLRHNTSSQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLNNVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>gi|339999199|ref|YP_004730082.1| hypothetical protein SBG_1212 [Salmonella bongori NCTC 12419]
gi|339512560|emb|CCC30300.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 423
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ + G + L+S + + ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GATVLRHHTSSRLNGENATLRLNSLAMPIKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATVG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDAALKQQVLARI 414
>gi|150026421|ref|YP_001297247.1| Fe-S assembly protein, SufD [Flavobacterium psychrophilum JIP02/86]
gi|149772962|emb|CAL44446.1| Fe-S assembly protein, SufD [Flavobacterium psychrophilum JIP02/86]
Length = 438
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +QN A I T + Q+ S + S GG ++R+N++
Sbjct: 212 NSVTEIFAQKRAVVDYYKVQNDVQTANLIDNTYIAQKQESHVSVHTFSFGGNITRNNLNF 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G + L ++ + Q D ++ + P Q +K I+ S VF+G +
Sbjct: 272 YHQGERIYSTLKGVTIIGNKQHVDHYTLVQHATPNCESHQNYKTILDGS-STGVFNGKIF 330
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+TDA Q ++LL +AT+N KP L+I ADDVKCSHG I L+E+ +FY Q R
Sbjct: 331 VEKEAQKTDAFQKNNNILLSEKATINAKPQLEIFADDVKCSHGCTIGQLDENAMFYMQQR 390
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
GI + A+ L+++F +EV P +R+++ + + +G
Sbjct: 391 GIPKKEAKALLMYAFTSEVTGSIKIPELRSKIARIIADKLG 431
>gi|437817793|ref|ZP_20842776.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
gi|435308133|gb|ELO83138.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
Length = 423
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+ VF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRTVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|455739563|ref|YP_007505829.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
subsp. morganii KT]
gi|455421126|gb|AGG31456.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
subsp. morganii KT]
Length = 434
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 5/238 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
++ + ++ + + +G+ RH L ++ A H + + E
Sbjct: 198 FISPDEQSAHFTGARMTANVGENSDFRHLKLGFENPQAYHFAHNDLVIAAHARVESTSFL 257
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
GGKL+RH+ Q G ++S L + D +R L+H +GYC RQ HK IV
Sbjct: 258 LGGKLTRHHTSTQLNGEGIVLAMNSLVLPKHGEIAD--TRTYLEHNKGYCESRQRHKTIV 315
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ +AVF+G +KV +A +TD +LLL +A ++ KP L+I ADDVKCSHGA +
Sbjct: 316 MDN-SRAVFNGMIKVAPHALKTDGQMTNNNLLLGRKAEIDTKPQLEIYADDVKCSHGATV 374
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 431
++E QLFY + RGI + A++ ++ +F AE+ + + N V++ ++ + D
Sbjct: 375 GRIDEEQLFYLRTRGIAEKAAKQMIILAFAAELTDAISDEVLNNVVMARIRQSLDQGD 432
>gi|334143296|ref|YP_004536452.1| FeS assembly protein SufD [Thioalkalimicrobium cyclicum ALM1]
gi|333964207|gb|AEG30973.1| FeS assembly protein SufD [Thioalkalimicrobium cyclicum ALM1]
Length = 446
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 178/417 (42%), Gaps = 68/417 (16%)
Query: 52 LAESLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
+A++ D S ++ L Q L + R ++ + +P+RKDE ++FT S
Sbjct: 14 VAKAAMDYYQSQATRLIQAEGEGHALARFRQAALHHFVEQGFPTRKDEDWQFTPLSNFLK 73
Query: 108 SQIQPITRPSSSLDVSTDAQFP------SLVLIDG-FIQNSALNLSNLPDGVYVGS---L 157
+ S D ++ A+ LV +DG F + + +L LP GV + S
Sbjct: 74 THYH--FNGVSQFDKASIAKIKPPVDAWHLVFVDGCFSEALSDDLVKLPKGVSIESGKDA 131
Query: 158 LGVSDG--IMKRVSDFISEFQCGDLFWSINGMGAPD---------------LGVIYVP-- 198
L G + + D I + D F +N M D + + YV
Sbjct: 132 LDFEQGFRVFAKHEDEIEQ----DAFGMLNAMLFDDGVFIELAAHTHLDKPIAISYVQTL 187
Query: 199 --------------------------AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 232
A + C + NSV E+ + + ++ QN
Sbjct: 188 KDHANTTRNKIKLGVGSQLQLIEQYVALDDACGFENSVCEIELAEQAQMSQVVWQNLPDQ 247
Query: 233 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 292
A + + S ++ GG +SRH H+Q G E+E +S + Q D
Sbjct: 248 AMYFNNQFIDLAEQSQFKTHYAGLGGAISRHQNHIQMAGDRIESEQNSICFARNQQIMDT 307
Query: 293 HSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRAT 351
+ G RQLHK ++ ++G VF+G +KV++ AQ+TD ++LLL +A
Sbjct: 308 RTYTGHKAENGLSRQLHKLVLTDQAIG--VFNGMIKVDQIAQKTDGMMDNKNLLLSNKAQ 365
Query: 352 VNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
+N KP L+I ADDVKCSHG+A + Q+FY QARG+ + AR+ + +F E +E
Sbjct: 366 MNAKPQLEIYADDVKCSHGSASGQISADQIFYLQARGLSKQQARQLVTLAFLMEPLE 422
>gi|146340501|ref|YP_001205549.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 278]
gi|146193307|emb|CAL77323.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 278]
Length = 440
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 182/436 (41%), Gaps = 74/436 (16%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + ++R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGAGKVVEIRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLD---------VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
P ++ +S D LVL+DG + +L+ LP GV V +L V
Sbjct: 69 PLAGAPDAAALARAKAAIAPISIDGA-AKLVLVDGVVAAELSDLAALPAGVGVRTLRAVL 127
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIY------------------------- 196
D + + D S+N A D GV+
Sbjct: 128 DEASNEAIGDLLLTKVSDPMLSLNAALATD-GVVVTVADGAQLTEPLHLIHVATASKAAR 186
Query: 197 --------------------VPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
+ AEG Y AN + +G G ++ H L + +A ++
Sbjct: 187 YSRSHVKVGQGARATLVETSIAAEGVAAYQANDAAVIWVGDGAQLSHIRLMRDAADAVNV 246
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
S L +++GG +SR G +E ++ +LL Q D+ L
Sbjct: 247 SSELFTVGAKSKLSLFNMTSGGAVSRLQAFFTLAGEASELIVNGVNLLRDKQHGDM--TL 304
Query: 297 LLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRAT 351
++DH C R+ + ++ AHS VF G + V + AQQTD +TR+LLL A
Sbjct: 305 VVDHAVPGCTSRENFRAVLDDRAHS----VFQGRIIVRQDAQQTDGKMMTRALLLSDEAE 360
Query: 352 VNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+ KP L+I ADDV C HGA L+ES LFY +ARG+ + A+ L+ +F E IE
Sbjct: 361 ADSKPELEIFADDVSCGHGATAGALDESLLFYLRARGLPEKQAQALLIQAFVGEAIEAIE 420
Query: 412 YPSIRNQVVSHVKNLM 427
++R +V++ ++ +
Sbjct: 421 DDALRERVIAAAEHWL 436
>gi|312881813|ref|ZP_07741587.1| FeS assembly protein SufD [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370564|gb|EFP98042.1| FeS assembly protein SufD [Vibrio caribbenthicus ATCC BAA-2122]
Length = 423
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 96/172 (55%), Gaps = 5/172 (2%)
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 315
G+L+RH+ Q G ++ +++S L QT D SR L+H +G+C RQ+HK I +
Sbjct: 250 GQLTRHHTSSQLNGENSHIDINSLTLPRKSQTYD--SRTYLEHNKGHCTSRQIHKVIASE 307
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
S +AVF+G +KV A +TD +LLL VN KP L+I ADDVKCSHG
Sbjct: 308 S-SKAVFNGMIKVAPNALKTDGQMDNHNLLLSRECEVNSKPQLEIYADDVKCSHGTTTGA 366
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
L + Q+FY Q RG+ E A + + +F AEV E P IR + +K M
Sbjct: 367 LNKEQVFYLQTRGLAKEQAEQLITLAFAAEVAEEVDIPFIRQLALESIKQKM 418
>gi|268317574|ref|YP_003291293.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
gi|262335108|gb|ACY48905.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
Length = 444
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 179/405 (44%), Gaps = 69/405 (17%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFT--DTSMIKSSQIQPI-TRPSSSLDVSTDAQFP 129
L LR + + +P RK E +++T ++ +I P+ P+ + D P
Sbjct: 35 LAALRRKAIERFGVLGFPGRKSEAWKYTPIAKALQHPYRIDPVPAVPALNEQALADYAIP 94
Query: 130 SL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL---- 180
L VL++G S+LP+GV + L + +R +D ++ L
Sbjct: 95 ELDAYRVVLVNGRFVPELSTTSDLPEGVVLTGL----EEAARRHADLFEKYFAHYLDFEN 150
Query: 181 --FWSINGMGAPDLGVIYVPAEGNDC---------------------------------- 204
F ++N A D +YVP EG
Sbjct: 151 EPFLALNTAFARDGFFLYVP-EGTALERPVHVLNLIDTDEELFLQPRNVVVAAPGASLKL 209
Query: 205 -----------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
+ N V EV +G+G +V L+ + A+ I T E + Y
Sbjct: 210 VTSGHSRAAQRTFTNGVTEVFVGQGAEVHQYDLRLEGEAASGIFSTQAYLEGGARYTNGT 269
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKC 311
++ GG L R+NV+V+ D E E + + L + + + + ++DH +C +L+K
Sbjct: 270 LTLGGALVRNNVYVRF--DDQEGEANLYGLFLGRGSMHIDNHTMIDHAVPHCVSNELYKG 327
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
I+ VF+G V V +AQ+T+A Q +S++L A + KP L+I ADDV+C+HGA
Sbjct: 328 ILDDE-ATGVFNGKVLVRPHAQKTNAYQSNKSIVLTREARMYSKPELEIYADDVRCTHGA 386
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
AI L+E +FY +ARG+ L+ AR ++ +F +V+++ +R
Sbjct: 387 AIGQLDEDGIFYLRARGLTLQKARAMMLLAFARDVLDQIAVAPVR 431
>gi|168240881|ref|ZP_02665813.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194451686|ref|YP_002045377.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|386591222|ref|YP_006087622.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|419729103|ref|ZP_14256064.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419734484|ref|ZP_14261374.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419737527|ref|ZP_14264317.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419744960|ref|ZP_14271606.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419749247|ref|ZP_14275732.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|421570815|ref|ZP_16016500.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|421573850|ref|ZP_16019481.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|421580678|ref|ZP_16026232.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|421586538|ref|ZP_16032019.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|194409990|gb|ACF70209.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205339301|gb|EDZ26065.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|381297337|gb|EIC38429.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381297806|gb|EIC38892.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381304881|gb|EIC45836.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381307167|gb|EIC48031.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|381311737|gb|EIC52548.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|383798266|gb|AFH45348.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|402519173|gb|EJW26536.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|402523395|gb|EJW30713.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|402526629|gb|EJW33900.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|402527937|gb|EJW35195.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
Length = 423
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 197/417 (47%), Gaps = 59/417 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTD-TSMIKSSQI 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T +I S I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLIHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLS------NLPDGV 152
Q S++ L + DA LV +DG F+ QNS ++S L V
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVSVRDERQTLAAPV 121
Query: 153 YVGSLLGVSDGIMKRVSDFISEFQCGD------LFWSINGMGAPDLGVIYVP-----AEG 201
+ L +++ + + V+ +I + L G+ +L + AEG
Sbjct: 122 HPEVFLHLTESLAQCVT-YIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHLALAEG 180
Query: 202 NDC-------------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 248
+ ++ + L + + ++RH L ++ ++ H + T +
Sbjct: 181 AEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDAS 240
Query: 249 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 306
G + RH+ Q G + L+S + V ++ D +R L+H +GYC R
Sbjct: 241 AFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSR 298
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
Q HK IV+ G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVK
Sbjct: 299 QSHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVK 357
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
CSHGA I +++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 358 CSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|374599262|ref|ZP_09672264.1| FeS assembly protein SufD [Myroides odoratus DSM 2801]
gi|423324406|ref|ZP_17302247.1| FeS assembly protein SufD [Myroides odoratimimus CIP 103059]
gi|373910732|gb|EHQ42581.1| FeS assembly protein SufD [Myroides odoratus DSM 2801]
gi|404608498|gb|EKB07962.1| FeS assembly protein SufD [Myroides odoratimimus CIP 103059]
Length = 439
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 121/226 (53%), Gaps = 3/226 (1%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NSV E+ K V LQN I T ++Q+ S + S GGKL+R+N+
Sbjct: 211 FTNSVTEIFSHKRAIVDFYKLQNDLDTGTLIDNTFIKQKQESRVSVHTFSFGGKLTRNNL 270
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDG 324
+ Q G ++ + L+ Q D ++ + D P Q +K + +S+G VF+G
Sbjct: 271 NFYQDGERIDSTMKGITLIGGKQHVDHYTLVSHDSPNCESHQNYKGLYDDNSVG--VFNG 328
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V++ AQ+TD Q + ++LL +A V KP L+I ADDV+CSHG I L+E +FY
Sbjct: 329 KIYVDKIAQKTDGFQQSNNILLSDKAQVYTKPQLEIFADDVRCSHGCTIGQLDEDAMFYM 388
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
+ RGI + A+ L+++F EV+E P ++ +V + + +G +
Sbjct: 389 RQRGIPQKEAKALLMYAFTDEVMESVKIPELKGKVAKVIASKLGVS 434
>gi|393758120|ref|ZP_10346944.1| hypothetical protein QWA_03345 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165812|gb|EJC65861.1| hypothetical protein QWA_03345 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 435
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 124/234 (52%), Gaps = 5/234 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
YV +G D ++ V + + + H LQ ++L H+ V+Q S + +S
Sbjct: 195 YVGQDGMDASLSSVVTRLNVAPDANLTHMKLQQEALQDFHLAAIDVQQGRGSVFNSHSLS 254
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
G +++R+++ G ET + + + D + + L+DH + C R+ ++ I+
Sbjct: 255 FGARIARNDIATVFNGERCETLFNGLYFV--DGRRHVDHNTLIDHAQPNCQSREFYRGIL 312
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
A + + VF G V V + A TD+ Q + SLLL A + +P L+I ADDVKC+HGA +
Sbjct: 313 ADT-ARGVFSGRVLVGKGADGTDSVQRSDSLLLSKMARADSRPELEIYADDVKCAHGATV 371
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
L+ LFY ++RG+ +E AR L+++F A+ +ER S+R++ + L+
Sbjct: 372 GQLDADSLFYLRSRGMSMEDARNMLIYAFAAQSLERIASESLRSRATVGINALL 425
>gi|416112189|ref|ZP_11593154.1| FeS assembly protein SufD [Riemerella anatipestifer RA-YM]
gi|442314164|ref|YP_007355467.1| hypothetical protein G148_0468 [Riemerella anatipestifer RA-CH-2]
gi|315022125|gb|EFT35154.1| FeS assembly protein SufD [Riemerella anatipestifer RA-YM]
gi|441483087|gb|AGC39773.1| hypothetical protein G148_0468 [Riemerella anatipestifer RA-CH-2]
Length = 427
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 185/409 (45%), Gaps = 63/409 (15%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
SL +++ + SSS PL KL ++ + LS +PS+KDE +++T+ I Q Q +
Sbjct: 2 SLVENIKTHSSS---PLSGDKL--NALERFLSKGFPSKKDEEYKYTNLKEIIEKQYQFL- 55
Query: 115 RPSSSLDVSTDA---------QFPSLVLIDGFI------------------------QNS 141
P +S + F +VL++G + +N
Sbjct: 56 -PQEEHHISEEELKALRLGGEDFDWVVLVNGKLRPELSKISDKDIKVLALDEVLSSGENE 114
Query: 142 AL------NLSN----LPDGVYVGSLLGVSDGIMKRVSD-------FISEFQCGDLFWSI 184
AL +SN P+ + LGV+ + K +IS+ Q + F++
Sbjct: 115 ALFRPYFNTISNESWAFPNLNLAFAHLGVALYVPKNTVVEKPIHIFYISQNQSENTFYNP 174
Query: 185 NGMGAPDLGVIYVPAEGNDCY-----WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 239
+ + G E + + + NS+ E+ K LQN + + + T
Sbjct: 175 RNILVVEAGSQIEVIESHHNFDTSFTFTNSLTEIFTKPNAKADWHKLQNDTDTSYLVDHT 234
Query: 240 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 299
V+QE S + S GGKL R+N+ Q G + + ++ ++ DQ D H+ + +
Sbjct: 235 FVKQERDSLATVNTFSFGGKLVRNNLDFIQEGENINSFMNGITIIGKDQLVDHHTAVHHN 294
Query: 300 HPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQ 359
P Q +K + + VF+G V V++ AQ+T+A Q ++LL AT++ KP L+
Sbjct: 295 QPNCESYQNYKGVFKDN-AHGVFNGKVFVDKIAQKTNAYQQNNNILLSEGATIDSKPQLE 353
Query: 360 IIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
I ADDVKCSHG + L E LFY +ARGI A+ L+++F + +E
Sbjct: 354 IFADDVKCSHGCTVGQLNEDALFYLRARGISKNEAQALLLYAFANDAME 402
>gi|154248387|ref|YP_001419345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154162472|gb|ABS69688.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 5/222 (2%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y AN +E+V+G G V LQ + +A H+ V A+ + + G LSR+
Sbjct: 219 AYQANHAMELVVGDGATVNLVRLQEEGASALHLGTLMVELGRAAKLNVFSLVQGAALSRY 278
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 321
+V+ + G T + LL Q D + + +DH C R+L K +++ V
Sbjct: 279 SVYGRFQGTGTNLGVRGATLLKGRQHAD--TTMFIDHAVAGCESRELFKTVLSDE-AHGV 335
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V R AQ+TD +++SLLL A ++ KP L+I ADDV+C HGA + L++ L
Sbjct: 336 FQGKIVVRRDAQKTDGRMMSQSLLLSDGAEMDNKPELEIFADDVQCGHGATVGTLDDKML 395
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
FY ++RG+ L+ A + L+ +F E +E ++R +++ +
Sbjct: 396 FYLRSRGLPLKEAERLLIQAFVGEAVEFVEDEALREILIARM 437
>gi|256422368|ref|YP_003123021.1| FeS assembly protein SufD [Chitinophaga pinensis DSM 2588]
gi|256037276|gb|ACU60820.1| FeS assembly protein SufD [Chitinophaga pinensis DSM 2588]
Length = 439
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 6/226 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST-GGKLSRHN 264
+ N+V EVV+ + ++ H +Q+ N+ HI T+ Q+ S Y + +L+R+N
Sbjct: 212 FVNAVTEVVLEENAELWHYNIQSTIKNSRHIYHTSATQKADSRYHHFNFTLPSAELTRNN 271
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVF 322
+ V G +TET L +L Q D H+ +DH P +L+K ++ VF
Sbjct: 272 LSVALTGSNTETNLHGLYLATGSQHVDNHT--FVDHLVPNCNSNELYKGVLLDD-ANGVF 328
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V++ AQ+T+A Q +LL+ +A +N +P L+I ADDVKCSHG + E LF
Sbjct: 329 TGKIHVHQDAQKTNAFQQNNNLLMSEKANINSQPQLEIYADDVKCSHGFTVGRFSEESLF 388
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Y ++RGI E A+ LV +F ++ ++ P++++ + ++ +
Sbjct: 389 YLRSRGIGEEAAKSLLVNAFAFDITDQVHIPALQDFLAEKIRQYVA 434
>gi|304321533|ref|YP_003855176.1| hypothetical protein PB2503_09909 [Parvularcula bermudensis
HTCC2503]
gi|303300435|gb|ADM10034.1| hypothetical protein PB2503_09909 [Parvularcula bermudensis
HTCC2503]
Length = 393
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 179/392 (45%), Gaps = 49/392 (12%)
Query: 59 SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS 118
SL ++ +L LP ++D L + PSR+ E +R++D SS P +S
Sbjct: 8 SLTAAEEALLADLPEGPVKDR----LATEGLPSRRTEAWRWSDIRAALSSAYSPSAPLAS 63
Query: 119 SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV---------------GSLLGVSDG 163
++ S + + V++ G A +++P+GV + SLL +G
Sbjct: 64 TVPPSLWPEEEAFVVLLG--NGRATVPADVPEGVTITREPGRPEIIGDAPLASLLTAKEG 121
Query: 164 -------------IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAEGNDCYWANSV 210
+++R+SD E GD GA L +I ++NS+
Sbjct: 122 LSLTLAPGVSATIVLRRMSD--GEGYHGDRVRIGVAEGA-HLRLIETHEVAGGGAFSNSL 178
Query: 211 LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE---VSTGGKLSRHNVHV 267
++ + G + LQ + I A + TA+G + +S G KLSRH +
Sbjct: 179 TDIDLADGAHLDRFVLQPAAQGI--IAGLARLRRTATGSARIRQLVLSGGAKLSRHETLI 236
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGN 325
G + L + L ++ DL S L+DH P G RQL K IV G+ VF G
Sbjct: 237 S--GGHADIILDGLYRLSEERHADLTS--LIDHEGPDGRTRQLVKGIVGDQ-GRGVFQGK 291
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+V+R AQ+TDA +LLL A V+ KP L+I ADDV+C+HG ++ L++ LFY +
Sbjct: 292 FRVDRKAQRTDAQMSHHALLLSEGAQVSAKPELEIYADDVECAHGNSVGALDDEALFYLR 351
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
RG+ E AR+ L+ +F EV+ R R
Sbjct: 352 QRGVREEAARELLIGAFAGEVLNRIEDEDFRR 383
>gi|298207477|ref|YP_003715656.1| FeS assembly protein SufD [Croceibacter atlanticus HTCC2559]
gi|83850113|gb|EAP87981.1| FeS assembly protein SufD [Croceibacter atlanticus HTCC2559]
Length = 437
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 1/225 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N+V E+ K V + +QN +A+ I T + Q+ S + S GGKL+R+N+
Sbjct: 209 FTNAVTEIFADKRAIVDYYKIQNDRQSASLIDNTYIDQKGESLCSVHTFSFGGKLTRNNL 268
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ Q G + L+ ++ Q D ++ + P Q +K I VF+G
Sbjct: 269 NFYQNGERINSVLNGVTIIEDKQHVDHNTLVHHIEPNCESHQDYKGIFDDK-AVGVFNGK 327
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V VN+ AQ+T+A Q ++L+ +AT+N KP L+I ADDV+C+HG I L+E LFY +
Sbjct: 328 VVVNKEAQKTNAYQSNNNILVSDKATINSKPQLEIFADDVRCTHGCTIGQLDEDALFYMK 387
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
+RGI + AR L+++F V+E P ++ ++ + N + +
Sbjct: 388 SRGIPHKEARALLMYAFANNVLESVKIPEVKKRINKIIANKLNVS 432
>gi|437390289|ref|ZP_20751039.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22558]
gi|445217151|ref|ZP_21402210.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|435200015|gb|ELN84039.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22558]
gi|444857719|gb|ELX82720.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
Length = 388
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQ HK IV+
Sbjct: 214 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQSHKTIVS 271
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 272 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 330
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 331 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 379
>gi|400406201|ref|YP_006588949.1| FeS assembly protein SufD [secondary endosymbiont of Heteropsylla
cubana]
gi|400364454|gb|AFP85521.1| FeS assembly protein SufD [secondary endosymbiont of Heteropsylla
cubana]
Length = 428
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G +LS+H + G + ++S LL+ + + R L+H GY RQLHK I+A
Sbjct: 254 GARLSQHQTSARTTGKRSHLTINS--LLLPSKNDISNIRTYLEHNTGYSVSRQLHK-IIA 310
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+ +F G +KV ++A + ++ +L+L+P A + KP L+I ADDV+C+H A +S
Sbjct: 311 SDYGKGIFSGLIKVAQHALKINSKMANHNLILDPMAEIYTKPQLEIYADDVQCTHAATLS 370
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
+E Q+FY +ARGI + A+K ++++F E+ E Y IR+ V+ H+ N
Sbjct: 371 RIETEQIFYLRARGIPYKEAKKIIIYAFVTEITEAIKYKEIRDIVLEHIAN 421
>gi|198244393|ref|YP_002215755.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|445142250|ref|ZP_21385936.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445149790|ref|ZP_21389391.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|197938909|gb|ACH76242.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|444849675|gb|ELX74784.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444857654|gb|ELX82658.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
Length = 423
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQ HK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQSHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|188583648|ref|YP_001927093.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
gi|179347146|gb|ACB82558.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
Length = 440
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 164/414 (39%), Gaps = 80/414 (19%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--------DAQF 128
R+ + + +T PSR+ E F++TD + P PS + + +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGAAGFAEVEA 93
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYV---------------------------------- 154
L ++G + + +L +P+GV V
Sbjct: 94 ARLTFVNGHLVAALSDLDRIPEGVTVTPLNAALAAGDARLKLLAPVEQVRENPIYQLNTA 153
Query: 155 ----GSLLGVSDGI-----------------MKRVSDFISEFQCGDLFWSINGMGAPDLG 193
G+L+ V+ G + + E G F+ + P G
Sbjct: 154 FLADGALISVAPGAKPQTPVHLRFVGTGETAFSTATRVLVEIGAGAEFFLLESHEGPS-G 212
Query: 194 VIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
+ Y P N L+V IG+ RH+ L + A + +VR + + E V
Sbjct: 213 LTYQP---------NDALDVRIGEEAAFRHTRLNREGDAAIALSTISVRLDARAQLETVN 263
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKC 311
+ TG KLSRH +++ G D ++ LL Q D S LL DH G R++ K
Sbjct: 264 LVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLAD--STLLADHAATGGVGREMFKT 321
Query: 312 IV-AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
++ S G VF G + V + AQQTD + LLL + KP L+I ADDV C HG
Sbjct: 322 VIDGDSTG--VFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPELEIFADDVACGHG 379
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
A +E LFY ARG+ TA LV +F E +E + R+ ++ ++
Sbjct: 380 ATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGARDALIGGIE 433
>gi|384261451|ref|YP_005416637.1| FeS assembly protein SufD [Rhodospirillum photometricum DSM 122]
gi|378402551|emb|CCG07667.1| FeS assembly protein SufD [Rhodospirillum photometricum DSM 122]
Length = 426
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 5/222 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N V +V++ +G ++ H+ L + + + T + YE ++ GG+L R+
Sbjct: 194 FTNLVSDVILEEGAQLSHARLICGAADGVTVGATLASVAAGARYETFSLTLGGRLVRNET 253
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFD 323
V+ G + ++ + + + Q D + + +DH P QL K ++ + G+AVF
Sbjct: 254 RVRLEGEGAQALVNGAYAVRAGQHVD--NTVFVDHAVPHATSSQLFKGVLDET-GRAVFQ 310
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V R AQ +D QL R+LLL P A V++KP LQI ADDV C HGA +++ QLFY
Sbjct: 311 GKILVRRDAQGSDGRQLHRALLLAPGAEVDIKPELQIYADDVVCGHGATAGEMDLDQLFY 370
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
Q+RG+D TAR LV +F + I ++ +V V++
Sbjct: 371 LQSRGLDAATARALLVEAFLDDAIGTVTDERLQEALVERVRD 412
>gi|110634130|ref|YP_674338.1| FeS assembly protein SufD [Chelativorans sp. BNC1]
gi|110285114|gb|ABG63173.1| FeS assembly protein SufD [Chelativorans sp. BNC1]
Length = 422
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 12/237 (5%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ +SV + +G G +V + +Q Q +A H+ V+ + L ++TGGKL
Sbjct: 193 GDGAALVSSVSHLDVGDGAEVVYLIIQEQPDDARHLGQIYVKIGKDAKLTLFVMNTGGKL 252
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
R + + G +E L +LL D D+ ++LDH P + + +V
Sbjct: 253 VRQELRIIAEGEGSEFRLRGVNLLAGDTHCDV--TMILDHAAPHTVSTETIRNVVTGK-A 309
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ F G ++V R AQ+TDA +LLL + KP L+I ADDV C HGA ++++E
Sbjct: 310 EGAFQGQIRVARDAQKTDAKMACNTLLLSDEGGFSSKPELEIFADDVACGHGATVTEIEP 369
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDVSFS 435
+ LFY ARGID +TAR LV +F AEVIE + V+ L G D F+
Sbjct: 370 AHLFYLMARGIDEKTARGLLVKAFVAEVIEELEDEQV-------VEVLEGKLDAWFA 419
>gi|357029337|ref|ZP_09091335.1| FeS assembly protein SufD [Mesorhizobium amorphae CCNWGS0123]
gi|355535256|gb|EHH04545.1| FeS assembly protein SufD [Mesorhizobium amorphae CCNWGS0123]
Length = 422
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 173/398 (43%), Gaps = 43/398 (10%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS------ 108
+L D+ S LP + RD + + + P+R+ E + +TD + +S
Sbjct: 15 ALIDAFGERLSLLPGDGAVMLKRDDAIEAI-KHGLPTRRVESWHYTDLRRLLTSVPAFDP 73
Query: 109 -----QIQPITRPSSSL---DVSTDAQFPSL----------VLIDGFIQNS--------- 141
I P+ S+ L D + A+ P + L DG +
Sbjct: 74 AAATKAIAPVIEGSAVLPLLDGVSTAKLPDIEGVTVQRLSEKLTDGSVAPGLDPYGADDA 133
Query: 142 --ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA 199
ALN + + DG +V G + + S Q + G GA I
Sbjct: 134 IGALNTAFVADGYFVDIADGAELDRPLELQNLQSAGQTHVRLLTRVGDGAK--ATIVERQ 191
Query: 200 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
G +SV ++V+G+G +V +Q Q A H+ S L ++ GGK
Sbjct: 192 TGEGAALVSSVSQLVLGEGAEVTWLIVQEQPDTATHLAQFKAHLGKNSKLTLFVMNAGGK 251
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSL 317
L R + V+ G + +L +LL D D+ ++LDH P ++ + +V
Sbjct: 252 LVRQEIVVRTTGEGADFKLRGINLLAGDTHTDV--TMVLDHAVPHTTSTEVIRNVVTGK- 308
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
+ VF G + V++YAQ+T+A +LLL + KP L+I ADDV C HGA +++++
Sbjct: 309 ARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVVCGHGATVTEID 368
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
LFY ARGID ++AR LV +F AEVIE +I
Sbjct: 369 HDHLFYLMARGIDEKSARGLLVKAFVAEVIEELDDEAI 406
>gi|205352908|ref|YP_002226709.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207857122|ref|YP_002243773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|375123731|ref|ZP_09768895.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|378954916|ref|YP_005212403.1| hypothetical protein SPUL_1189 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|421358130|ref|ZP_15808428.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|421364604|ref|ZP_15814836.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421366607|ref|ZP_15816809.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421373572|ref|ZP_15823712.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421377043|ref|ZP_15827142.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|421381543|ref|ZP_15831598.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|421385222|ref|ZP_15835244.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|421390450|ref|ZP_15840425.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|421393710|ref|ZP_15843654.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|421398244|ref|ZP_15848152.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|421404056|ref|ZP_15853900.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|421409567|ref|ZP_15859357.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|421413291|ref|ZP_15863045.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421418602|ref|ZP_15868303.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|421422278|ref|ZP_15871946.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|421426484|ref|ZP_15876112.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|421432764|ref|ZP_15882332.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|421434769|ref|ZP_15884315.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|421441807|ref|ZP_15891270.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421444629|ref|ZP_15894059.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|421448081|ref|ZP_15897476.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
gi|436627186|ref|ZP_20515174.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436792622|ref|ZP_20521585.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE30663]
gi|436795745|ref|ZP_20522498.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|436809028|ref|ZP_20528408.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|436815216|ref|ZP_20532767.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|436844639|ref|ZP_20538397.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436854030|ref|ZP_20543664.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436857571|ref|ZP_20546091.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436864745|ref|ZP_20550712.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436873691|ref|ZP_20556415.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436878110|ref|ZP_20558965.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|436888348|ref|ZP_20564677.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436895868|ref|ZP_20568624.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436901749|ref|ZP_20572659.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436912210|ref|ZP_20578039.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|436922142|ref|ZP_20584367.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436927120|ref|ZP_20586946.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436936161|ref|ZP_20591601.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436943351|ref|ZP_20596297.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|436951161|ref|ZP_20600216.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436961514|ref|ZP_20604888.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436970892|ref|ZP_20609285.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436983506|ref|ZP_20614095.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436994360|ref|ZP_20618831.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437007087|ref|ZP_20623138.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|437024008|ref|ZP_20629217.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|437030330|ref|ZP_20631300.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437040710|ref|ZP_20634845.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437053965|ref|ZP_20642764.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437058681|ref|ZP_20645528.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|437070496|ref|ZP_20651674.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|437076371|ref|ZP_20654734.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|437081266|ref|ZP_20657718.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|437091570|ref|ZP_20663170.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|437101783|ref|ZP_20666232.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|437121065|ref|ZP_20671705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437130976|ref|ZP_20677106.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437138727|ref|ZP_20681209.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|437145582|ref|ZP_20685489.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|437156913|ref|ZP_20692449.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|437164322|ref|ZP_20697139.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437165569|ref|ZP_20697661.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|437180270|ref|ZP_20706038.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|437186123|ref|ZP_20709392.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|437258853|ref|ZP_20716773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|437268423|ref|ZP_20721893.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|437277262|ref|ZP_20726781.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|437293318|ref|ZP_20732033.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|437312340|ref|ZP_20736448.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|437332491|ref|ZP_20742182.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 17927]
gi|437343796|ref|ZP_20745964.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS4]
gi|437409708|ref|ZP_20752492.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|437452162|ref|ZP_20759643.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|437460717|ref|ZP_20761671.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|437473500|ref|ZP_20765801.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|437499686|ref|ZP_20774110.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|437514494|ref|ZP_20777857.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|437525455|ref|ZP_20779764.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|437560857|ref|ZP_20786141.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437577804|ref|ZP_20791153.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437594871|ref|ZP_20795788.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|437601184|ref|ZP_20797507.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437613764|ref|ZP_20801644.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437653854|ref|ZP_20810269.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437663641|ref|ZP_20814078.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437681585|ref|ZP_20818505.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|437696921|ref|ZP_20822584.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|437714935|ref|ZP_20827768.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|437733861|ref|ZP_20832106.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437764660|ref|ZP_20835045.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|437801153|ref|ZP_20838094.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|438031412|ref|ZP_20855324.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-5646]
gi|438088089|ref|ZP_20859550.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|438099942|ref|ZP_20863686.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|438110521|ref|ZP_20867919.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|438124307|ref|ZP_20872544.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|445135138|ref|ZP_21383131.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|445170586|ref|ZP_21395759.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445223988|ref|ZP_21403487.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445322216|ref|ZP_21412135.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|445326420|ref|ZP_21412584.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|445353036|ref|ZP_21420928.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445357157|ref|ZP_21422077.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|205272689|emb|CAR37603.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708925|emb|CAR33255.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326627981|gb|EGE34324.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|357205527|gb|AET53573.1| hypothetical protein SPUL_1189 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|395984093|gb|EJH93283.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395988434|gb|EJH97590.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|395989262|gb|EJH98396.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395996691|gb|EJI05736.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|396000665|gb|EJI09679.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|396001506|gb|EJI10518.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|396014260|gb|EJI23146.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|396016659|gb|EJI25526.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|396017593|gb|EJI26458.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|396024864|gb|EJI33648.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|396027136|gb|EJI35900.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|396031317|gb|EJI40044.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|396037880|gb|EJI46524.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|396040379|gb|EJI49003.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396041593|gb|EJI50216.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|396048980|gb|EJI57523.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|396053991|gb|EJI62484.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|396059150|gb|EJI67605.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|396063109|gb|EJI71513.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|396067060|gb|EJI75420.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|396073681|gb|EJI81981.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
gi|434942790|gb|ELL49020.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|434956082|gb|ELL49855.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE30663]
gi|434962079|gb|ELL55310.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434962168|gb|ELL55394.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|434966845|gb|ELL59680.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|434973332|gb|ELL65720.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|434979225|gb|ELL71217.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434982833|gb|ELL74641.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434989723|gb|ELL81273.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434995780|gb|ELL87096.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|434998448|gb|ELL89669.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|435008047|gb|ELL98874.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|435010058|gb|ELM00844.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435015757|gb|ELM06283.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435021183|gb|ELM11572.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435024460|gb|ELM14666.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435026455|gb|ELM16586.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|435036961|gb|ELM26780.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435038999|gb|ELM28780.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435043550|gb|ELM33267.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|435050653|gb|ELM40157.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435051628|gb|ELM41130.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435057181|gb|ELM46550.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435064519|gb|ELM53647.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435065944|gb|ELM55049.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435070003|gb|ELM59002.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|435073815|gb|ELM62670.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|435082095|gb|ELM70720.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435087166|gb|ELM75683.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435088979|gb|ELM77434.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435090467|gb|ELM78869.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|435094494|gb|ELM82833.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|435105668|gb|ELM93705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|435111885|gb|ELM99773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|435112476|gb|ELN00341.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|435123762|gb|ELN11253.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|435124950|gb|ELN12406.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435126143|gb|ELN13549.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435132249|gb|ELN19447.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|435135520|gb|ELN22629.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|435137043|gb|ELN24114.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|435139650|gb|ELN26634.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435150037|gb|ELN36731.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|435154251|gb|ELN40838.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|435158997|gb|ELN45367.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|435166100|gb|ELN52102.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|435173448|gb|ELN58958.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|435174602|gb|ELN60044.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|435180757|gb|ELN65862.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|435183472|gb|ELN68447.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|435188469|gb|ELN73182.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 17927]
gi|435191573|gb|ELN76130.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS4]
gi|435204707|gb|ELN88371.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|435208482|gb|ELN91891.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|435221009|gb|ELO03283.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|435223634|gb|ELO05656.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|435225020|gb|ELO06953.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|435229493|gb|ELO10854.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|435238183|gb|ELO18832.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435242746|gb|ELO23050.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435248311|gb|ELO28197.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|435251401|gb|ELO31023.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|435261466|gb|ELO40621.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435264239|gb|ELO43171.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435264757|gb|ELO43652.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435266281|gb|ELO45044.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435270913|gb|ELO49397.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|435276509|gb|ELO54511.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|435285698|gb|ELO63063.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|435286928|gb|ELO64160.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435304123|gb|ELO79928.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|435308190|gb|ELO83185.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|435317932|gb|ELO90932.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|435325540|gb|ELO97405.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|435327470|gb|ELO99159.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-5646]
gi|435331728|gb|ELP02826.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|444846388|gb|ELX71568.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|444862211|gb|ELX87070.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444868734|gb|ELX93349.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444869620|gb|ELX94192.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|444873213|gb|ELX97514.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444881601|gb|ELY05639.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|444886757|gb|ELY10502.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
Length = 423
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQ HK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQSHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 414
>gi|115524971|ref|YP_781882.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisA53]
gi|115518918|gb|ABJ06902.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisA53]
Length = 439
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 119/231 (51%), Gaps = 11/231 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+V A G Y + L++ I G ++ L + +A HI ++G ++
Sbjct: 205 FVAAGGTKGYQTHDALQIAIEDGARLEQIRLNEDATDAFHIASCFATLGASAGLNTFNLT 264
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
TGG +SR+ ++ G +E + +LL + TQ + L LDH +C R++ + ++
Sbjct: 265 TGGAVSRYQAFIRFNGEGSEVMTNGVNLL--NGTQHGDTTLFLDHAVPHCSSREVFRAVL 322
Query: 314 ---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
AHS VF G + V +AQ+TDA +TR+LLL A + KP L+I ADDV C HG
Sbjct: 323 DGRAHS----VFQGRIIVRPHAQKTDAKMMTRALLLSDEAEADSKPELEIFADDVTCGHG 378
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
+ L+ES LFY +ARG+ + A+ L+ +F E IE +R ++
Sbjct: 379 STTGALDESLLFYLRARGLPEKDAQSLLIQAFVGEAIESIADDDLRALAIT 429
>gi|406663211|ref|ZP_11071277.1| FeS cluster assembly protein sufD [Cecembia lonarensis LW9]
gi|405552728|gb|EKB48079.1| FeS cluster assembly protein sufD [Cecembia lonarensis LW9]
Length = 425
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 117/226 (51%), Gaps = 5/226 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK--WTAVRQETASGYELVEVSTGGKLSR 262
Y++N V E+ + + V +S LQ + A + T + ++ LV +S G + R
Sbjct: 200 YFSNMVTEIKVAQNAHVHYSRLQAEHRRAIVVNNFETDIHRDATFTSSLVSLS--GDMVR 257
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 322
+N+ + L E + +LL D H+ + P +L+K I+A + VF
Sbjct: 258 NNLSLNLLDSGCEGNMYGLYLLNGKTHVDNHTNVDHTKPHAESNELYKGILADK-SRGVF 316
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G + V + AQ+T+A Q ++LL ATVN KP L+I ADDVKCSHG L+E LF
Sbjct: 317 NGKIFVRQDAQKTNAFQQNNNILLSEDATVNTKPQLEIWADDVKCSHGCTTGQLDEEALF 376
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Y QARG+ E A+ L+++F EV+++ R V V+ +G
Sbjct: 377 YLQARGLGKEQAKGLLLYAFAGEVLDKISNDGFRAFVTQKVQERLG 422
>gi|417373682|ref|ZP_12143648.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|353601823|gb|EHC57352.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
Length = 423
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQ HK IV+
Sbjct: 249 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQSHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 307 DK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY Q+RGI + AR ++++F AE+ E +++ QV++ +
Sbjct: 366 RIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIYDSALKQQVLARI 414
>gi|338213041|ref|YP_004657096.1| FeS assembly protein SufD [Runella slithyformis DSM 19594]
gi|336306862|gb|AEI49964.1| FeS assembly protein SufD [Runella slithyformis DSM 19594]
Length = 439
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 5/218 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G++ + N V E+V+ + V++ +QN++ A HI T V Q+ S + V V+ G
Sbjct: 212 GDNGSFTNVVTEIVVEENANVQYYKVQNETEKAYHIGTTQVLQKDKSHFYAVTVTVNGGF 271
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
R+N+++ G E+ + + Q D H+ L+DH P Y +L+K I+
Sbjct: 272 VRNNLNIVLDGQYCESFMYGLYFPNGKQHVDNHT--LVDHAKPNSYSNELYKGILKDK-S 328
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
VF+G + V YA +T+A Q R+++L A++N KP L+I DDVKCSHG L +
Sbjct: 329 TGVFNGKIFVREYASKTNAYQSCRNVVLSDEASMNTKPQLEIYNDDVKCSHGTTTGKLND 388
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+FY ++RGI A L+++F +VI + IR
Sbjct: 389 EAIFYMRSRGIPKAEAVTLLMYAFCEDVISQIKIEPIR 426
>gi|375261342|ref|YP_005020512.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
oxytoca KCTC 1686]
gi|397658434|ref|YP_006499136.1| iron-sulfur cluster assembly protein SufD [Klebsiella oxytoca E718]
gi|365910820|gb|AEX06273.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
oxytoca KCTC 1686]
gi|394346735|gb|AFN32856.1| Iron-sulfur cluster assembly protein SufD [Klebsiella oxytoca E718]
Length = 424
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 102/164 (62%), Gaps = 5/164 (3%)
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RH+ Q G ++ ++S + V+ + D SR LDH GYC RQLHK IV + G+
Sbjct: 255 RHHTSTQLKGENSTLRINSLAMPVNGEVCD--SRTWLDHQVGYCNSRQLHKTIV-NDKGR 311
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G + V ++A +TD +LLL + V+ KP L+I ADDVKCSHGA I +++
Sbjct: 312 AVFNGLINVAQHAIKTDGQMTNNNLLLGRLSEVDTKPQLEIYADDVKCSHGATIGRIDDE 371
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY ++RGI + A++ ++++F AE+ E ++R Q+++ +
Sbjct: 372 QLFYLRSRGITQQAAQQMILYAFAAELTEAIDDEALRQQILARI 415
>gi|304311759|ref|YP_003811357.1| FeS assembly protein [gamma proteobacterium HdN1]
gi|301797492|emb|CBL45712.1| FeS assembly protein [gamma proteobacterium HdN1]
Length = 456
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 5/209 (2%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
S+L++ + +++H LQ I T + + Y V G L R+++H+
Sbjct: 227 SLLQIHLHDNAQLQHVQLQLADEQCQQICTTQTQLGRDARYRHYNVLLGTNLLRNDLHL- 285
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL--HKCIVAHSLGQAVFDGNV 326
L D E + +S Q + + L L+H GYC+ +K +V +A+F+G +
Sbjct: 286 -LFNDKGAEAELYGAFLSKHNQHVDNHLNLEHVSGYCQSTTQYKGLVTDR-SRAIFNGRI 343
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
++ +A +TDA ++LLL A ++ KP L+I ADDVKC+HGA+I L++ LFYF++
Sbjct: 344 HIHPHAIKTDAQLNNKNLLLSREAEIDTKPELEIYADDVKCAHGASIGQLDDRSLFYFES 403
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSI 415
RGID TA L F F E+IE+ P PS+
Sbjct: 404 RGIDRSTAEAMLSFGFINEIIEKLPIPSL 432
>gi|114327987|ref|YP_745144.1| sufD protein [Granulibacter bethesdensis CGDNIH1]
gi|114316161|gb|ABI62221.1| sufD protein [Granulibacter bethesdensis CGDNIH1]
Length = 441
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y N+V ++ + + + H QN+ +A HI YE ++ GG++
Sbjct: 207 GRGTYLHNAVTQISVAEDAVLEHIRWQNEDQHAFHIATVFADVAARGRYEAFVLNMGGRV 266
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
+R H + G + LL Q D+ S + P RQ + ++A +
Sbjct: 267 ARAEFHARLDGEGGAVHVHGAQLLRDQQVGDITSIVRHTAPGCSSRQAVRNVLA-GRSRG 325
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G ++V R AQ+TD Q+ +LLL A ++ KP L+I ADDVKCSHGA + +L+ Q
Sbjct: 326 VFQGKIEVTREAQKTDGYQMNAALLLSDEAEIDTKPELEIFADDVKCSHGATVGELDADQ 385
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+FY ++RG+ AR LV +F AE I+ + R
Sbjct: 386 MFYLRSRGVPEVQARAILVRAFLAEAIDTVSHEGAR 421
>gi|326801400|ref|YP_004319219.1| FeS assembly protein SufD [Sphingobacterium sp. 21]
gi|326552164|gb|ADZ80549.1| FeS assembly protein SufD [Sphingobacterium sp. 21]
Length = 435
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 118/224 (52%), Gaps = 6/224 (2%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST-G 257
A G+ N+V E+V+ + ++H YLQ + ++ T V+Q S Y S G
Sbjct: 204 ANGSTISLNNTVSELVLNENAHLQHYYLQTSGEKSRYLNHTEVKQAKHSLYNNYNCSFPG 263
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAH 315
R+N++V+ E+ L L DQ D H+ ++DH +C + +K I A
Sbjct: 264 SSFVRNNINVRLDDTSVESHLYGVTLTAKDQLVDNHT--IVDHRMPHCESYEWYKNI-AQ 320
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
AVF+G + V AQ+T+A Q ++L+ +A++ KP L+I ADDVKCSHG +
Sbjct: 321 DTSTAVFNGKIFVQPDAQKTNAFQQNNNMLIGDKASILTKPQLEIFADDVKCSHGCTMGQ 380
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
++ LFY +ARGI +AR LV +F +V E+F ++R V
Sbjct: 381 FDDEALFYLKARGIGEASARVLLVHAFAFDVTEKFSNDNVRAYV 424
>gi|212712080|ref|ZP_03320208.1| hypothetical protein PROVALCAL_03159 [Providencia alcalifaciens DSM
30120]
gi|422018400|ref|ZP_16364957.1| cysteine desulfurase activator complex subunit SufD [Providencia
alcalifaciens Dmel2]
gi|212685602|gb|EEB45130.1| hypothetical protein PROVALCAL_03159 [Providencia alcalifaciens DSM
30120]
gi|414104692|gb|EKT66257.1| cysteine desulfurase activator complex subunit SufD [Providencia
alcalifaciens Dmel2]
Length = 435
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 113/212 (53%), Gaps = 5/212 (2%)
Query: 211 LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQL 270
L V +G + H L ++ +A H + S + G L+RH+ +
Sbjct: 217 LTVEVGDNVQFTHFKLMTENASAQHFAHNDIIVGRDSVVKSSSFLLGAGLTRHHTSSRLE 276
Query: 271 GPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 328
G +TE EL+S L ++ D +R L+H GYC QLHK I S +AVF+G +KV
Sbjct: 277 GENTEFELNSLLLPQGNEIAD--TRSYLEHNAGYCSSHQLHKVIAMDS-SKAVFNGMIKV 333
Query: 329 NRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARG 388
A +TD +LLL +A ++ KP L+I ADDVKC HGA + +++ QLFY ++RG
Sbjct: 334 APNALKTDGQMTNNTLLLGEKAEIDTKPQLEIYADDVKCGHGATVGRIDDEQLFYLRSRG 393
Query: 389 IDLETARKALVFSFGAEVIERFPYPSIRNQVV 420
ID + A++ ++ +F AE+ E ++ V+
Sbjct: 394 IDSQAAKQMIINAFAAELTESIAIDGLKQAVM 425
>gi|120556063|ref|YP_960414.1| FeS assembly protein SufD [Marinobacter aquaeolei VT8]
gi|120325912|gb|ABM20227.1| Iron-regulated ABC transporter permease protein SufD [Marinobacter
aquaeolei VT8]
Length = 428
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 184/422 (43%), Gaps = 60/422 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SLP+PL LR + L+ P P+RK E ++++ + +K + I+ P+
Sbjct: 12 LHPAGESLPEPL--LALRKERASALVDMPLPTRKTENWKYS-SKYLKLADDMAISLPAEG 68
Query: 120 LDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC 177
P +V I+G + A +L DG+ + S +++ + +S +
Sbjct: 69 -KTGNSLAVPGYKVVFINGVMIPEASEYPDL-DGIEILSFNDLANDEAEALSAKLGSTLN 126
Query: 178 GDL--FWSINGMGAPDLGV-------------------------------IYVPA----- 199
D F +NG D G+ IYV A
Sbjct: 127 HDQAQFARLNGARFED-GLFIRLKPGAVLDQPLFIIHETSADASGSAYPRIYVEAGANSQ 185
Query: 200 ---------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 250
G ++V E + G V L + N HI T V Q+ +S +E
Sbjct: 186 LTLVEEYTSSGEASALVSTVTEFNLADGANVTSIRLNMEGENVQHIGATGVLQQRSSRFE 245
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 308
V GG L RH++ V+ G ET+L+ + Q D H+ + DH +C +
Sbjct: 246 SHCVGFGGPLRRHDLQVRLEGEGAETKLNGVVVTQGKQHYDNHTSI--DHVAAHCNSEET 303
Query: 309 HKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCS 368
++ I A AVF+G + +++ AQ+++A ++LLL A ++ KP L+I ADDVKC+
Sbjct: 304 YRNIAADQ-SHAVFNGRIHIHQDAQKSNADMNNKNLLLSNGAEIDTKPELEIYADDVKCA 362
Query: 369 HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
HGA I L+E+ +FY +RGI A L +F E++++ P ++R + + +
Sbjct: 363 HGATIGQLDETSVFYLVSRGIGRRQANVLLTMAFINELVQQIPVEAVRETAQARLSDFFE 422
Query: 429 TT 430
T
Sbjct: 423 QT 424
>gi|330861454|emb|CBX71677.1| hypothetical protein YEW_LR49840 [Yersinia enterocolitica W22703]
Length = 604
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 12/203 (5%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQ---NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G+ ++ H L QS + AH R A Y + G L+
Sbjct: 115 HFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGLT 171
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G+
Sbjct: 172 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTMV-RERGK 228
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA I ++
Sbjct: 229 AVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATIGRIDAE 288
Query: 380 QLFYFQARGIDLETARKALVFSF 402
QLFY Q+RGI+ A++ ++F F
Sbjct: 289 QLFYLQSRGINQADAQQ-MIFCF 310
>gi|359790747|ref|ZP_09293629.1| hypothetical protein MAXJ12_15000 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253337|gb|EHK56487.1| hypothetical protein MAXJ12_15000 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 422
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 5/212 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ A+SV ++++G ++ +Q+Q A H S L ++ GGKL
Sbjct: 193 GSGAALASSVSQLLLGDDAEILWIIVQDQPETATHFAQFKAELGKNSKLTLFIMNAGGKL 252
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
R V V G + +L +LL D D+ ++LDH P ++ + +V
Sbjct: 253 VRQEVVVDAKGEGADFKLRGVNLLAGDSHTDV--TMVLDHSVPHTTSTEVIRNVVT-GRA 309
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ VF G + V +YAQ+TDA +LLL + KP L+I ADDV+C HGA +++++
Sbjct: 310 KGVFQGRINVAQYAQKTDAKMACNTLLLSDDGEFSTKPELEIFADDVQCGHGATVTEIDH 369
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERF 410
+ LFY ARGID +TAR LV +F AEVIE
Sbjct: 370 NHLFYLMARGIDEKTARGLLVKAFLAEVIEEL 401
>gi|284035108|ref|YP_003385038.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
gi|283814401|gb|ADB36239.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
Length = 441
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G + N V E+V+ + ++++ + N++ A HI T V Q S + ++ G
Sbjct: 214 GEKSSFVNVVTEIVLDRDARMQYYKVLNETAKAYHIGTTQVHQSDNSHFYSASITLNGHF 273
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
R+N+++ G E + ++ Q D H+ L+DH P Y +L+K I+ +
Sbjct: 274 VRNNLNIVLNGQHAEAFMYGLYMPNGRQHVDNHT--LVDHAMPNSYSNELYKGILDDN-S 330
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
VF+G + V AQ+T+A Q ++++L P A++N KP L+I ADDVKCSHG L +
Sbjct: 331 TGVFNGKIFVRPDAQKTNAYQSCKNVVLSPGASMNTKPQLEIYADDVKCSHGTTTGQLND 390
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
LFY ++RGI + AR L+++F +V+ + IR
Sbjct: 391 EALFYMRSRGIPKDEARTLLLYAFSQDVLSQIKIQPIR 428
>gi|347535593|ref|YP_004843018.1| Fe-S assembly protein, SufD [Flavobacterium branchiophilum FL-15]
gi|345528751|emb|CCB68781.1| Fe-S assembly protein, SufD [Flavobacterium branchiophilum FL-15]
Length = 438
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 1/212 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V E+ K V + +QN A+ I T + Q+ S + S GG ++R+N++
Sbjct: 212 NAVTEIFAQKRAIVDYYKVQNDLQTASLIDNTYIAQKQESHVAVHTFSFGGNITRNNLNF 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G ++ L ++ Q D ++ + P Q +K I+ S VF+G +
Sbjct: 272 YHQGERIDSTLKGITIIGDKQHVDHYTLVQHATPNCESHQNYKTILNDS-ATGVFNGKIF 330
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+TDA Q ++L+ +AT+N KP L+I ADDVKCSHG I L+ES LFY Q R
Sbjct: 331 VEKEAQKTDAFQQNNNILIGDKATINAKPQLEIFADDVKCSHGCTIGQLDESALFYMQQR 390
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
GI + A+ L+++F +EV P ++ ++
Sbjct: 391 GIPKKEAKALLMYAFTSEVTNSVKIPELKAKI 422
>gi|221632407|ref|YP_002521628.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
gi|221156953|gb|ACM06080.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
Length = 445
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 189/435 (43%), Gaps = 69/435 (15%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI---- 113
+++ S L +P L++ R ++ + TP PSR DE +R TD + Q+ P
Sbjct: 15 EAVEELSHLLDEPAWLRERRLAAWEIYERTPMPSRTDEEWRRTDIRRLPIDQVVPFAGVG 74
Query: 114 -------TRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG- 163
PS+ ++ DA S LV +D + + L+ +GV LL +
Sbjct: 75 QRVSGPDVLPSALFEILGDAALRSGLLVQVDSSVVFTQLDPQLAAEGVVFTDLLTAARDM 134
Query: 164 --IMKRVSDFISE---------------FQCGDLFWSI-NGM--GAPDLGVIYVPAEGND 203
+++RV F++E F G F + G+ P ++ G+
Sbjct: 135 PELLQRV--FMTEAVKPEDNKFAALHGAFWSGGTFLYVPEGVEVALPLRSFVWAETPGSA 192
Query: 204 CY------------------WAN----------SVLEVVIGKGGKVRHSYLQN--QSLNA 233
+ WA+ +V+E++ G+G +VR+ LQ+ +S+
Sbjct: 193 IFAHTLLVAEPGASVVLIDTWASPTVEEPLIASNVVEIITGEGAQVRYIQLQDWGRSVWN 252
Query: 234 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 293
+ +RQ+ + VS G +LS+ + +GP E+ + Q D
Sbjct: 253 FTTQRALLRQDVT--VNTLNVSLGSRLSKAFIASNLVGPGATAEMLGLYFADDAQHLDHQ 310
Query: 294 SRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
+R P L+K + + VF G +KV AQ+TDA Q R+L+L P A +
Sbjct: 311 TRQWHVAPYASSDLLYKGALKDR-ARTVFSGLIKVFPQAQRTDAYQANRNLILSPTARAD 369
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
PNL+I A+DV+C+HGA + +EE +FY +RGI A K +V F EVIER P
Sbjct: 370 TIPNLEIGANDVRCTHGATVGQVEEEYIFYLMSRGISRPEAVKLIVDGFFDEVIERVPVT 429
Query: 414 SIRNQVVSHVKNLMG 428
++ V + + +G
Sbjct: 430 EVQETVRAAIARKIG 444
>gi|158425237|ref|YP_001526529.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158332126|dbj|BAF89611.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 445
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 66/418 (15%)
Query: 69 QPLP--LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
QP+ + +LR +++ P+R+ E +++TD I + P+ P LD S +A
Sbjct: 31 QPVAGRIGELRRAAATAFSEGGLPTRRVEEWKYTDLKAILRDAV-PLAGP---LDASAEA 86
Query: 127 Q--FPSL--------VLIDGFIQNSALNLSNLPDGVY-----------------VGSL-- 157
+ F +L + ++G + A +L L G+ +G+L
Sbjct: 87 EGSFKALTVPGAKRILFVNGALARPASDLLALESGIAALPLESAIASNDPLAERIGALQP 146
Query: 158 -----------LGVSDGIMKRVS---DFISEFQCGDLFWSINGMGAPDLGVIYVPA---- 199
+ + +G++ RV+ + ++F + + V+ V
Sbjct: 147 QRYDAPLALNTVFLGEGLLVRVAAGAKIAAPLHIANVFTGDDPVATYGRVVVVVEDGAEV 206
Query: 200 ------EGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
+G D Y N+ LE+ +G G V +Q + A H+ V +
Sbjct: 207 TLVESFQGRDGVAYQTNTALELFVGDGAHVDLVRVQEEGDAALHLSTVMVEIGREAQLHT 266
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLH 309
+++G K SR +++ + G + L +LL Q QD + LLLDH +C R+L
Sbjct: 267 FALNSGAKASRTSLYGRFGGQHSHAGLRGANLLKGKQHQD--TTLLLDHAVPHCESRELF 324
Query: 310 KCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
K ++A VF G + V AQ+TD ++R+LLL A ++ KP L+I ADDV+C H
Sbjct: 325 KTVLADE-SHGVFQGKIVVRPDAQKTDGRMMSRALLLGEAAEMDNKPELEIFADDVQCGH 383
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
GA DL+E LFY +ARGI A LV +F E IE ++R +++ + +
Sbjct: 384 GATAGDLDEDLLFYLKARGIPQRQAEALLVQAFVGEAIEFVENEALRELIIARAETWL 441
>gi|149369533|ref|ZP_01889385.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
gi|149356960|gb|EDM45515.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
Length = 437
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 121/225 (53%), Gaps = 5/225 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V E+ K V + +QN + A+ + T ++QE S + S GGK++R+N+
Sbjct: 211 NAVTEIFADKRAMVDYYKIQNDTPEASLVDSTYIKQERESICSVHTFSFGGKITRNNLQF 270
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGN 325
Q G ++ L+ ++ Q D ++ L+ H C Q +K I S VF+G
Sbjct: 271 TQEGEYCDSILNGVTIIGDKQHVDHNT--LVHHIAENCESHQDYKGIFDDS-STGVFNGK 327
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V + AQ+ DA Q ++L+ +AT+N KP L+I ADDVKCSHG I ++ LFY +
Sbjct: 328 VYVEKEAQKLDAFQQNNNILISDKATINAKPQLEIFADDVKCSHGCTIGQMDSDALFYMR 387
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
+RGI + A+ L+++F V+E P +++++ + +G +
Sbjct: 388 SRGIGEKEAKALLMYAFANNVLESVKIPELKSRINKLIAEKIGVS 432
>gi|260772564|ref|ZP_05881480.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
gi|260611703|gb|EEX36906.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
Length = 419
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 177/392 (45%), Gaps = 51/392 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L +R + L T WP+R+ E +R+T S ++ ++ P + ++ +++ A +
Sbjct: 19 LSPVRQQALNALRQTRWPTRRTEAWRYTSLSCLEQLELSPKS-DNAPFNLAPIAGLETID 77
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV +DG +Q + L+ NLP GV + S + +D VS F LF +N + A
Sbjct: 78 LVFVDGQLQ-TDLSALNLPQGVSIYSAQSLPADQQAAAVSRFSQVKPSRHLFGMVNDVLA 136
Query: 190 PDLGVIYVPAE------------GNDCYWANSVLEVVIGKGGK---VRHSYLQNQSLNAA 234
++ I V E + Y A+ ++V +G GK + H+ +L
Sbjct: 137 DNVLFIDVDPECHCTTPIRIVHHNHHGYEAHYRVQVNLGHHGKLTLIEHAQGSGDNLRTG 196
Query: 235 HIKWTAVRQETASGYELV-------------------------EVSTGGKLSRHNVHVQQ 269
+ Y+ + + G +LSR +V +
Sbjct: 197 FTECLLDTHAELEHYQFLINSPQALYFGGTHFSLNDHAQLNSTVIGFGSQLSRLDVDIIH 256
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
G E ++++ +LL + D+HS + P G + + IV AVF+G + ++
Sbjct: 257 SGEHAEAKMNAVYLLGESEHFDMHSTIEHAKPNGTSEENVRGIVGDK-ATAVFNGRIHIH 315
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+T A R+LLL R +N KP L+I ADDVKC+HGA ++++EE L+Y +RGI
Sbjct: 316 RDAQKTLAELNNRNLLLSRRGQINTKPELEIYADDVKCAHGATVAEIEEEALYYLMSRGI 375
Query: 390 DLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
A L F E+I + P NQV++
Sbjct: 376 GRSQALVMLNVGFIQELINQMP-----NQVLA 402
>gi|371775946|ref|ZP_09482268.1| FeS assembly protein SufD [Anaerophaga sp. HS1]
Length = 464
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 186/442 (42%), Gaps = 76/442 (17%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L E ++ SSS + L LR+ + + L PS K E +++T+ S
Sbjct: 18 LFEENRQTIEDSSSKV-----LNNLREQALEAFLKLGIPSNKVENYKYTNLQPYFSGDFS 72
Query: 112 -PITRPSS--------SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ P S DV T F ++ + N+ L LP+GV VGSL ++
Sbjct: 73 FSLNAPDFTGRMEDIFSCDVETLDSFTIFIVNGWYYSNNGSAL--LPEGVRVGSLAALA- 129
Query: 163 GIMKRVSDFISEFQCGDLFW------SINGMGAPDLGVIYVPA----------------- 199
K F+ ++ + W ++N M A D I++P
Sbjct: 130 ---KEDPSFVEKYYGKNAPWLSDGLVALNTMFARDGFYIHIPKGVVVEKPIQVVNILLSE 186
Query: 200 -------------EGN--------------DCYWANSVLEVVIGKGGKVRHSYLQNQSLN 232
E N D + N+V E + ++ + LQNQ
Sbjct: 187 EPLMTNQRNLIVLEENSEARVLVCDHTLSSDRFVVNNVTEGFVAPNARLDYYNLQNQHNA 246
Query: 233 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 292
+ V Q+ S + ++ + R+N+ ++ LG E +LL D+ Q +
Sbjct: 247 TTQVAGLYVDQKENSYVKTNNLTLHTGVGRNNIVLKLLGKHAEGHAYGLYLL--DKNQHV 304
Query: 293 HSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRA 350
+ +DH P + +L K ++ A F G + V AQ+T+A Q +LLL A
Sbjct: 305 DNFSFIDHAVPECFSDELFKGVLDDH-ATAAFTGKIMVRPDAQKTNAYQTNNNLLLTRDA 363
Query: 351 TVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
+N +P L+I ADDVKCSHGA + L+E +FY ++RGI+ + A L+++F EVIE+
Sbjct: 364 KINSRPQLEIYADDVKCSHGATVGQLDEEAMFYLRSRGINKDEATILLMYAFAYEVIEKI 423
Query: 411 PYPSIRNQVVSHV-KNLMGTTD 431
+R Q+ S V K G D
Sbjct: 424 KMDPLREQIRSLVEKRFRGELD 445
>gi|94501135|ref|ZP_01307658.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
gi|94426711|gb|EAT11696.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
Length = 451
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 5/211 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N E + G K+ H + + ++ H V + S +E ++ GGK+ R +V V
Sbjct: 215 NQTSEAYVADGAKLEHYRVHTEHESSLHFGGMYVDLQRDSQFESYQMLLGGKIKRFDVLV 274
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGN 325
P + E+ +L +DQ D+HS ++H +C ++++ I+A + +AVF+G
Sbjct: 275 NHNQPGSHCEMKGVYLPKNDQHVDIHS--YIEHKAAHCTTDEVYRGIMADN-SKAVFNGR 331
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ ++ AQ+T A ++LLL +A VN KP L+I ADDV+C+HGA ++ L+E+ FY +
Sbjct: 332 IHIHPDAQKTLAELSNKNLLLSDKAQVNTKPELEIYADDVRCAHGATVAQLDETAKFYLR 391
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+RGI + A L F F E+I+ P ++R
Sbjct: 392 SRGISSKEADIMLSFGFINELIDSMPLEALR 422
>gi|213421382|ref|ZP_03354448.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 165
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 5/155 (3%)
Query: 271 GPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 328
G + L+S + V ++ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 5 GENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 61
Query: 329 NRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARG 388
+++ +TD +LLL A V+ KP L+I ADDVKCSHGA I +++ Q+FY Q+RG
Sbjct: 62 AQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRG 121
Query: 389 IDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
I + AR ++++F AE+ E +++ QV++ +
Sbjct: 122 IRQQEARHMILYAFAAELTEAIHDSALKQQVLARI 156
>gi|389875965|ref|YP_006369530.1| FeS assembly protein SufD [Tistrella mobilis KA081020-065]
gi|388526749|gb|AFK51946.1| FeS assembly protein SufD [Tistrella mobilis KA081020-065]
Length = 449
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 5/231 (2%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
+ + N+ +E+ +G+G K+ LQ HI A + +++++ GG+LS
Sbjct: 210 GETAFVNATVEIRLGRGAKLTLIRLQTSGEKGFHIDRLASSIAGDAELDMIQIDMGGRLS 269
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQ 319
RH + V G L + + Q D S + +H CR Q K VA +
Sbjct: 270 RHTLDVALEGRGAAATLDGLFAIGAGQQTDTRSNV--EHRARDCRLSQTWKG-VAGGRAR 326
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
+F+G V V A TDA +R+LL A + KP L+I AD+VKC+HGA + + E
Sbjct: 327 GIFNGRVHVLPGAIGTDAEMSSRNLLASREAEILPKPELEIHADEVKCAHGATVGAISEQ 386
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
+LFY ++RG+D R+ L +F E+++R P+ + R QV V M T
Sbjct: 387 ELFYLRSRGLDAAEGRRILTRAFAEEIVDRLPFETFREQVSGWVDRHMAQT 437
>gi|154706072|ref|YP_001424793.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164685980|ref|ZP_01947350.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165924043|ref|ZP_02219875.1| FeS assembly protein SufD [Coxiella burnetii Q321]
gi|212218764|ref|YP_002305551.1| SufD [Coxiella burnetii CbuK_Q154]
gi|154355358|gb|ABS76820.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164601505|gb|EAX32026.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165916502|gb|EDR35106.1| FeS assembly protein SufD [Coxiella burnetii Q321]
gi|212013026|gb|ACJ20406.1| SufD [Coxiella burnetii CbuK_Q154]
Length = 426
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 179/425 (42%), Gaps = 66/425 (15%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
E +L + + Q P QK +T L +P RK E +++T+ + PI
Sbjct: 6 ESALRALQNQNSQWHPWQK---EQLKTFLLHGFPHRKVENWKYTN--------VTPIAEQ 54
Query: 117 SSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
+ S +TDA LV I+G +LS LP V + SL + I +
Sbjct: 55 AFSFGENTDADIADFILPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNEL 114
Query: 169 S---DFISEFQCGD--LFWSINGMGAPD-------------------------------- 191
+ D+ + F + LF + P
Sbjct: 115 AIKKDYQTAFSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKPTASLTMSQIRHVILLE 174
Query: 192 ---LGVIYVPAEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
VI+ +G + Y+ N V ++ + + LQ + A HI T++ Q
Sbjct: 175 ENAKAVIFEEYQGTNGVAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRH 234
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC- 305
S ++ G +LSR +++ +L F+ L D H+R+ DH +C
Sbjct: 235 SQVTSGHIAMGSELSRDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTRI--DHRVSHCT 292
Query: 306 -RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
+Q +K I+A +AVF+G + V A+QT A Q ++L+L A V+ KP L+I DD
Sbjct: 293 SQQNYKGILADK-SRAVFNGKIIVQPNAKQTSAHQTNKNLILSSDAEVDTKPELEIYNDD 351
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
VKC+HGA + L E +FY Q+RGI+ A L +F EV+E P I +++ V
Sbjct: 352 VKCTHGATVGQLNEEAIFYLQSRGINRGAAEHLLTCAFANEVVEMLPNKVIADRIQQLVT 411
Query: 425 NLMGT 429
+ + T
Sbjct: 412 DRLAT 416
>gi|260061112|ref|YP_003194192.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
gi|88785244|gb|EAR16413.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
Length = 455
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV E+ K V + +Q A+ I T + Q+T S + S GG L+R+N++
Sbjct: 229 NSVTEIFAAKDAIVDYYKVQTDRPTASLIDNTYIDQKTNSQVSVHTFSFGGNLTRNNLNF 288
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
Q G + L +L Q D H+ + P Q +K I VF+G +
Sbjct: 289 YQDGNHMNSILKGVTILGDKQHVDHHTLVHHQQPDCESHQDYKGIFGDQ-STGVFNGKII 347
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V++ AQ+T+A Q +LL+ +A+VN KP L+I ADDVKCSHG I L++ LFY ++R
Sbjct: 348 VDKIAQKTNAFQQNNNLLISDKASVNTKPQLEIFADDVKCSHGCTIGQLDQDALFYLRSR 407
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
GI + A L+++F V+E P ++ ++ + +G
Sbjct: 408 GIGKKEAEALLMYAFANNVLESVRIPELKGRINRLIAEKLG 448
>gi|402493160|ref|ZP_10839915.1| FeS assembly protein SufD [Aquimarina agarilytica ZC1]
Length = 437
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 119/223 (53%), Gaps = 1/223 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NSV E+ G + + +QN + ++ + T Q + S + + GG+++R+N+
Sbjct: 209 FTNSVTEMYTGNNAHIDYYKIQNDTDASSLVDNTFTEQHSNSVCSVHTFAFGGEITRNNL 268
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ Q G ++ L+ +L D ++ + P Q +K I VF+G
Sbjct: 269 NFYQKGQGIDSILNGVTILEGKTHVDHNTLVEHQEPNCESHQDYKGIFDEK-STGVFNGK 327
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V + AQ+T+A Q ++LL +ATVN KP L+I ADDVKCSHG I L+ES LFY +
Sbjct: 328 IIVEQEAQKTNAFQSNNNILLSDKATVNSKPQLEIFADDVKCSHGCTIGQLDESALFYMR 387
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+RGI + A+ L+++F V+E P ++ ++ + + +G
Sbjct: 388 SRGIATKEAKALLMYAFANNVLESVKIPQLKTRINKIIADKLG 430
>gi|82777160|ref|YP_403509.1| cysteine desulfurase [Shigella dysenteriae Sd197]
gi|309788336|ref|ZP_07682940.1| feS assembly protein SufD [Shigella dysenteriae 1617]
gi|81241308|gb|ABB62018.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308923718|gb|EFP69221.1| feS assembly protein SufD [Shigella dysenteriae 1617]
Length = 423
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 249 GGTVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+ + V ++A +TD +LL+ A V+ KP L+I ADDVKCSHGA
Sbjct: 307 DK-GRAVFNCLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATEG 365
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 366 RIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEELKQQVLARI 414
>gi|345302709|ref|YP_004824611.1| FeS assembly protein SufD [Rhodothermus marinus SG0.5JP17-172]
gi|345111942|gb|AEN72774.1| FeS assembly protein SufD [Rhodothermus marinus SG0.5JP17-172]
Length = 444
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 117/213 (54%), Gaps = 5/213 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N V EV +G+G +V L+ +S A+ I T E + Y ++ GG L R+NV
Sbjct: 222 FTNGVTEVFVGQGAEVHQYDLRLESEAASGIFSTQAYLEGGARYTNGTLTLGGALVRNNV 281
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 323
+V+ + E L F L D H+R+ DH +C +L+K I+ VF+
Sbjct: 282 YVRFDDQEGEAHLYGFFLGRGSMHIDNHTRI--DHAVPHCVSNELYKGILDDE-ATGVFN 338
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G V V +AQ+T+A Q +S++L A + KP L+I ADDV+C+HGAAI L+E +FY
Sbjct: 339 GKVLVRPHAQKTNAYQSNKSIVLTREARMYSKPELEIYADDVRCTHGAAIGQLDEDGIFY 398
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+ RG+ L+ AR ++ +F +V+++ +R
Sbjct: 399 LRTRGLTLQRARAMMLLAFARDVLDQIAVEPVR 431
>gi|226330346|ref|ZP_03805864.1| hypothetical protein PROPEN_04263 [Proteus penneri ATCC 35198]
gi|225201141|gb|EEG83495.1| FeS assembly protein SufD [Proteus penneri ATCC 35198]
Length = 435
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 118/233 (50%), Gaps = 11/233 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELV 252
Y+ ++ + ++ + L IG H + S + AH T R + Y +
Sbjct: 202 YISSDNKNRHFTGARLTAAIGDNASFNHIKLGFENGVSQHFAHNDLTIGRDARVNSYAFL 261
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 310
G KLSRH+ G +T ++S L + + D +R L H C RQLHK
Sbjct: 262 ---LGAKLSRHHTSSALKGENTVLSMNSVVLPKAGEIAD--TRTWLVHGEKNCQSRQLHK 316
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
I A G+AVF+G + V A +TD +LLL +A ++ KP L+I ADDVKCSHG
Sbjct: 317 SI-AMDAGKAVFNGMITVTPQALKTDGQMTNNNLLLGDKAQIDTKPQLEIYADDVKCSHG 375
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
A + +++ QLFY ++RGI L ARK ++ +F AE+ E I++ V+ +
Sbjct: 376 ATVGRIDDEQLFYLRSRGISLTDARKMIIHAFAAELTESIENSVIKSLVLDRI 428
>gi|374263111|ref|ZP_09621663.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
gi|363536373|gb|EHL29815.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
Length = 397
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 159/375 (42%), Gaps = 52/375 (13%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLI-DGFIQNSALNLSN 147
+P R DE +++T + +++ ++D S ++I +G I +
Sbjct: 14 FPGRHDEEWKYTRVDALLKQPFAAYHHGLAAVPKASDLPIASQIVIHNGLISGVEVLAKT 73
Query: 148 LPDGVYVGSL--------------LGVSDGIMKRVSDF----ISEFQCGDLFWSINGM-- 187
LP GV V L LG+ I+K+ F + CG L + G+
Sbjct: 74 LPAGVLVLPLAAALISHPELLKPYLGM---ILKQEHGFHFLNTAMIHCGVLIYLPAGVYL 130
Query: 188 --------------GAPDLGVIYVPAEG-------------NDCYWANSVLEVVIGKGGK 220
A L + + G N CY N+V EV +G K
Sbjct: 131 DEPIALRHIQDQTNQAVHLRHVIIAEAGSQATIVEDYQGLENSCYLTNTVTEVFMGTNAK 190
Query: 221 VRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSS 280
+ H +Q +S A H+ +V+Q T S + +S GGK R ++ + ++
Sbjct: 191 LTHCKIQRESKAAYHLGHLSVKQSTRSEFANHSLSLGGKCVRSDLSLYLQEEHAHCLMNG 250
Query: 281 FHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQL 340
+ Q D H+ + P Q +K I+ +AVF+G V V + AQ TDA Q
Sbjct: 251 IYAPAEGQHVDHHTTVHHLVPNCRSEQDYKGILT-GRSRAVFNGKVLVAKDAQHTDAQQQ 309
Query: 341 TRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVF 400
++LLL A V+ KP L+I ADDV CSHGA + L+E LFY RGID A L+
Sbjct: 310 NKNLLLSANAEVDTKPQLEIFADDVLCSHGATVGQLDEEALFYLATRGIDRVEASHYLIH 369
Query: 401 SFGAEVIERFPYPSI 415
+F + + P+P +
Sbjct: 370 AFARDNLRLIPHPKL 384
>gi|402843466|ref|ZP_10891861.1| FeS assembly protein SufD [Klebsiella sp. OBRC7]
gi|423103453|ref|ZP_17091155.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5242]
gi|376386117|gb|EHS98834.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5242]
gi|402276884|gb|EJU25979.1| FeS assembly protein SufD [Klebsiella sp. OBRC7]
Length = 424
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 101/164 (61%), Gaps = 5/164 (3%)
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RH+ Q G ++ ++S + V+ + D SR LDH GYC RQLHK IV + G+
Sbjct: 255 RHHTSTQLKGENSTLRINSLAMPVNGEVCD--SRTWLDHQVGYCNSRQLHKTIV-NDKGR 311
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G + V +A +TD +LLL + V+ KP L+I ADDVKCSHGA I +++
Sbjct: 312 AVFNGLINVAPHAIKTDGQMTNNNLLLGRLSEVDTKPQLEIYADDVKCSHGATIGRIDDE 371
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY ++RGI + A++ ++++F AE+ E ++R Q+++ +
Sbjct: 372 QLFYLRSRGITQQAAQQMILYAFAAELTEAIDDEALRQQILARI 415
>gi|422022558|ref|ZP_16369065.1| cysteine desulfurase activator complex subunit SufD [Providencia
sneebia DSM 19967]
gi|414095728|gb|EKT57388.1| cysteine desulfurase activator complex subunit SufD [Providencia
sneebia DSM 19967]
Length = 434
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 15/234 (6%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR-----QETASGYELVEVST 256
+ ++ S L V +G + +H L +++ H ++ Q +S + L
Sbjct: 207 DKAHFTGSRLTVEVGDNAQFKHFKLNSENEQVQHFAHNDIKIGRDSQVLSSSFLL----- 261
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G KL+RH+ Q G + L+S L + + D +R L+H YC RQLHK I
Sbjct: 262 GAKLTRHHTSTQLNGENANLSLNSLLLPKNTEIAD--TRTYLEHNAEYCESRQLHKVIAM 319
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
S +AVF+G +KV+ A +TD +LLL +A V+ KP L+I ADDVKC HGA +
Sbjct: 320 DS-SKAVFNGMIKVSPNALKTDGQMSNNTLLLGDKAEVDTKPQLEIYADDVKCGHGATVG 378
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
++E QLFY ++RGID + A+ ++ +F AE+ E ++ V++ ++ +
Sbjct: 379 RIDEEQLFYLRSRGIDGKEAKHMIIIAFAAELTESIASEELKQAVMTSIRQRLA 432
>gi|189501697|ref|YP_001957414.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497138|gb|ACE05685.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
Length = 439
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 5/211 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G + + N+V ++++G ++ LQ Q NA I Q S S G L
Sbjct: 210 GENEGFTNAVTDIIVGPYTQLDCYTLQTQLGNACQINNIHYYQAEHSVVNNYAFSWDGML 269
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
R+N+H+ E + + L + TQ + + L+DH P +L+K I+ +
Sbjct: 270 IRNNLHIVIQASHAEANMYGLYCL--NNTQHIDNHTLVDHQQPHTASNELYKGIIGGN-A 326
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
VF+G + V AQ+T+A Q ++LL +AT++ KP L+I ADDVKCSHGA I L+E
Sbjct: 327 TGVFNGRIYVQPEAQKTNAFQANNNILLSDQATIHTKPQLEIWADDVKCSHGATIGQLDE 386
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIER 409
SQLFY Q+RGI A+ L+ SF EVI +
Sbjct: 387 SQLFYLQSRGIPEGLAKHMLLESFADEVISK 417
>gi|163753693|ref|ZP_02160816.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
gi|161325907|gb|EDP97233.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
Length = 439
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
NSV EV K V + +QN + A+ I T + Q+ +S + S GGKL R+N+
Sbjct: 213 NSVTEVFANKRAIVDYYKIQNDNQQASLIDNTYISQKQSSHASVHTFSFGGKLVRNNLQF 272
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
Q G ++ + ++ Q D ++ + P Q +K I VF+G V
Sbjct: 273 FQKGEHIDSTMKGITIIGDKQHVDHNTLVHHIEPNCESHQDYKGIFG-DRSTGVFNGKVV 331
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + AQ+T+A Q ++L++ +AT+N KP L+I ADDVKCSHG I L++ LFY ++R
Sbjct: 332 VEKEAQKTNAFQANNNILVDDKATINTKPQLEIFADDVKCSHGCTIGQLDKDALFYLRSR 391
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
GI + A+ L+++F V+E +I+ ++ + +G
Sbjct: 392 GIPKKEAKALLMYAFANNVLESVKINAIKTRINKLIAQKLG 432
>gi|157412422|ref|YP_001483288.1| ABC transporter membrane component [Prochlorococcus marinus str.
MIT 9215]
gi|157386997|gb|ABV49702.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9215]
Length = 405
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 224 SYLQNQS--LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 281
SY +N+S LN+ + V Q S Y L + +R + ++Q + +T +
Sbjct: 206 SYGENKSNLLNSLN-----VIQHKNSEYNLGSLHYKFNYARFEISIKQSAGNAKTNIKGM 260
Query: 282 HLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLT 341
+ D+ ++++ + P G+ Q++K + A A+F+G++ V + AQ+TDA QL+
Sbjct: 261 QITKKDEQISTYTKIDFNGPNGFLDQINKSL-ADDKSHAIFEGSIIVPKIAQKTDASQLS 319
Query: 342 RSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFS 401
R+LLL A ++ KP L+IIADDVKC HGA IS L E +LFY + RGI L+ A K + S
Sbjct: 320 RNLLLSNFAKIDTKPQLEIIADDVKCKHGATISQLNEEELFYMRTRGITLQEASKLQLSS 379
Query: 402 FGAEVIERFPYPSIR 416
+ E+I P R
Sbjct: 380 YFQEIISFIPISKER 394
>gi|269104612|ref|ZP_06157308.1| iron-sulfur cluster assembly protein SufD [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268161252|gb|EEZ39749.1| iron-sulfur cluster assembly protein SufD [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 423
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 228 NQSLNAAHIKWTAVRQE--TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 285
N+ L+ AH R T+S Y L GK RH + G + E++S L
Sbjct: 224 NEQLHLAHNHIVTNRDANVTSSAYLL-----SGKWIRHKTSSELGGENGVVEMNSLSLPA 278
Query: 286 SDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRS 343
DQ D SR L+H +CR QLHK +VA G+ VFDG + V+ A +TD +
Sbjct: 279 RDQCFD--SRTYLNHSVSHCRSHQLHK-MVAVDDGKGVFDGLIYVSPGALKTDGQMDNHN 335
Query: 344 LLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFG 403
LL+ +A +N +P L+I ADDVKCSHGA L++ Q+FY QARGI E A + ++ +F
Sbjct: 336 LLIGDKAQINSQPKLEIYADDVKCSHGATTGQLDQEQIFYLQARGIKKELAERMIIKAFA 395
Query: 404 AEVIERFPYPSIRNQVVSHVK 424
EV + + IR ++ HV+
Sbjct: 396 KEVCDLVSFEPIRRYLLDHVE 416
>gi|33239536|ref|NP_874478.1| ABC transporter permease [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33237061|gb|AAP99130.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 405
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 1/203 (0%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
+++E+ I V H + + + ++ QE S Y + SR H+
Sbjct: 191 NLIEIYIENQAIVNHGCIAIGKQYSKLLSHISIIQEKESVYSFCSMLEDWYFSRIEQHIF 250
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 328
QL + T + + + + + HS + P G Q+HK I A+ ++F+G + V
Sbjct: 251 QLDGNASTNIKGLQITSNSENIETHSIVKFGGPNGSLEQIHKAIAANE-SHSIFNGLIDV 309
Query: 329 NRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARG 388
+ AQQT A Q++++LLL A ++ P L IIADDV+C+HGA IS LE+ +LFY Q+RG
Sbjct: 310 PQVAQQTKASQISKNLLLSSNAKIDTSPKLNIIADDVQCNHGATISQLEKEELFYLQSRG 369
Query: 389 IDLETARKALVFSFGAEVIERFP 411
ID A ++ F E++ P
Sbjct: 370 IDQNLANSLIINGFCNEILNGMP 392
>gi|270158825|ref|ZP_06187482.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|289166382|ref|YP_003456520.1| component of SufBCD complex [Legionella longbeachae NSW150]
gi|269990850|gb|EEZ97104.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|288859555|emb|CBJ13520.1| component of SufBCD complex [Legionella longbeachae NSW150]
Length = 426
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 178/406 (43%), Gaps = 64/406 (15%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT------DTSMIKSSQIQPITR 115
+S SSLP L L+ + + L +P+R DE +++T + S + S ++ + +
Sbjct: 14 TSLSSLPW---LAHLQTKALRDLHRRGFPTRHDEDWKYTSVDGLLNQSFLPVSNLESVAK 70
Query: 116 PSSSLDVSTDAQFPSLVLIDG--FIQNSALNLSNLPDGV------------------YVG 155
PS D+ D +L+ + + L S LP GV Y+G
Sbjct: 71 PSH-YDLEFDLPITQKILLQNGSYFSDDRLT-SVLPKGVIVLPLSAAIIQHPELLEPYLG 128
Query: 156 SLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD-LGVIYVP--------------AE 200
++L G + I CG + + G+ + + + +V AE
Sbjct: 129 NILKQEHGFHYLNTAMI---HCGVMIYIPKGVVLEEPIALTHVQTRMNQAVYLRHVIIAE 185
Query: 201 GND--------------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
N Y N+V E+++G ++ H +Q +S +A H+ AV+Q
Sbjct: 186 ANSRATVIEDYQGLPDGSYLTNTVTEILVGANAQLTHYKIQRESKSAYHVGHVAVKQLAG 245
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 306
S + +S GG+ R +V + T + ++ + Q D H+ + P
Sbjct: 246 SEFANHSLSLGGQWVRSDVSLDLQEEKTYSLMNGIYAPTEGQHVDHHTTVQHLVPNCRSE 305
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
Q +K I+ +AVF+G V V + AQ TDA Q ++LLL A V+ KP L+I ADDV
Sbjct: 306 QDYKGILT-GRSRAVFNGKVFVAKDAQHTDAIQQNKNLLLSVNAEVDTKPQLEIFADDVL 364
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPY 412
CSHGA + L+E LFY RGID A L+ +F ++ + P+
Sbjct: 365 CSHGATVGQLDEEALFYLATRGIDRLEASHYLIHAFASDNLRLVPH 410
>gi|399926345|ref|ZP_10783703.1| FeS assembly protein SufD [Myroides injenensis M09-0166]
Length = 440
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 121/226 (53%), Gaps = 3/226 (1%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NSV E+ K LQN I T ++Q+ S + S GGKL+R+N+
Sbjct: 212 FTNSVTEIFAHKRAICDFYKLQNDLDTGTLIDNTFIKQKQESRVSVHTFSFGGKLTRNNL 271
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDG 324
+ Q G ++ L L+ Q D ++ + + P Q +K + +S+G VF+G
Sbjct: 272 NFYQDGERIDSTLKGITLIGGKQHVDHYTLVSHNQPNCESHQDYKGLYNDNSVG--VFNG 329
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V++ AQ+TD Q + ++LL +A V KP L+I ADDVKCSHG I L+E +FY
Sbjct: 330 KIYVDKIAQKTDGFQQSNNILLSDKAVVYTKPQLEIFADDVKCSHGCTIGQLDEEAMFYL 389
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTT 430
+ RGI + A+ L+++F +V++ P ++++V + + +G +
Sbjct: 390 RQRGIPKKEAKALLMYAFTDDVMKSVKIPELKSKVAKVIADKLGVS 435
>gi|357384575|ref|YP_004899299.1| iron-sulfur cluster assembly protein SufD [Pelagibacterium
halotolerans B2]
gi|351593212|gb|AEQ51549.1| iron-sulfur cluster assembly protein SufD [Pelagibacterium
halotolerans B2]
Length = 403
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 171/381 (44%), Gaps = 41/381 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SL L +D++ + L P+R+ E + +TD + S Q+ P+ +
Sbjct: 9 LSGAEESLVAQLESAGAKDAAER-LRVIGLPTRRVESYHYTDLKTLLS-QVPPLAQ---- 62
Query: 120 LDVSTDAQFPSL--------VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV-SD 170
V+ D+ P++ V+ +G +Q+++ + + G GS+L D ++ R+ +
Sbjct: 63 --VANDSSAPAIDIPGAYRIVIANGVMQSTSTAPAGVIVGKAAGSILTTRDDVIVRLNAA 120
Query: 171 FISEFQCGDLFWSIN----------GMGA-------------PDLGVIYVPAEGNDCYWA 207
+SE +L S++ G A VI + + +
Sbjct: 121 LVSESLSLELSGSVDPVIHIDRRMEGAAAHVQSGAKIAIAPGAKATVIETISGSDAAHMG 180
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+ + +G G V H + + A H R + + V ++ G L+R NV
Sbjct: 181 NAGSYISVGDGADVTHILVDLSARQATHFATVEYRIGAEANLKSVVINAGAHLARANVFA 240
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
+G T + +++ +D+ +D+ + P +L+K I A G+AVF G +
Sbjct: 241 DFVGEGTHGDFFGLNVVDTDEHRDITIDITHGVPNTTSAELYKQI-ARGRGKAVFQGKIN 299
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V AQ+TDA +T+ L+L A + KP L+I ADDV C HGA DL+E+ LFY +R
Sbjct: 300 VAVDAQKTDAKMMTQGLMLSDEAEILSKPELEIFADDVVCGHGATCGDLDETWLFYLMSR 359
Query: 388 GIDLETARKALVFSFGAEVIE 408
GI A L+ +F E+ E
Sbjct: 360 GISRADAETMLIRAFLEEITE 380
>gi|53804903|ref|YP_113468.1| FeS assembly protein SufD [Methylococcus capsulatus str. Bath]
gi|53758664|gb|AAU92955.1| FeS assembly protein SufD [Methylococcus capsulatus str. Bath]
Length = 434
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 2/206 (0%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y V ++ + G + H LQ A H + R + +S GG L R+
Sbjct: 212 YLGAVVNQIEVADNGGLNHYKLQLDGGRAYHFGGSYARVARDGRFGHHLLSLGGLLVRNE 271
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
VH + LG +TE++ L + Q D H R+ D P G R ++ I+ + VF G
Sbjct: 272 VHAR-LGHAAQTEMNGVFLSENRQHVDNHIRVDHDEPHGSSRVSYRGIL-EDRSRGVFQG 329
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V+ AQ+TDA R+LLL A ++ KP L+I ADDVKC+HG I L+ +FY
Sbjct: 330 RIVVHADAQKTDAEMNNRNLLLSDDAEIDTKPQLEIHADDVKCAHGVTIGQLDPDSVFYL 389
Query: 385 QARGIDLETARKALVFSFGAEVIERF 410
++RGID TAR+ L F+F AE++ERF
Sbjct: 390 ESRGIDAATAREMLTFAFAAEIVERF 415
>gi|418936150|ref|ZP_13489887.1| FeS assembly protein SufD [Rhizobium sp. PDO1-076]
gi|375057133|gb|EHS53320.1| FeS assembly protein SufD [Rhizobium sp. PDO1-076]
Length = 425
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 176/390 (45%), Gaps = 36/390 (9%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI---------- 105
L D+ + SLP + RD TL P+R+ E F +TD +
Sbjct: 16 LIDAYTNQIGSLPGDGAVLLQRDGLFDTLKRQGLPTRRVESFHYTDLKALLRALPADEIS 75
Query: 106 -KSSQIQPITRPSSSL----DVSTDA-QFPSLVLIDGFIQN-------SALNLSNLPD-- 150
+ ++PI ++ L V+ DA P + + + + AL N D
Sbjct: 76 AVAEGVRPIVTNATVLAIRQGVAQDAGSLPEGLTVTAYRDSLKDGSAAPALTAYNSEDTI 135
Query: 151 ----GVYV--GSLLGVSDGI-MKRVSDFISEFQCGDL---FWSINGMGAPDLGVIYVPAE 200
G +V G L ++DG ++ + + S G L F + G GA V +
Sbjct: 136 GRINGAFVRDGFSLEIADGAEIEELIELQSVHAAGHLHLRFPATFGKGAKATIVERHVGQ 195
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
+ A V ++ +G G +V LQ + +H+ + + L ++ GGKL
Sbjct: 196 SDSAALATVVADLTLGDGAEVTWVILQGEGDADSHLGQIRADLGPNAKFRLFIINAGGKL 255
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
R VHV+ G ++ L + +LL D D+ L + P ++ + IV +
Sbjct: 256 VRQEVHVKTTGEGSDFTLRAVNLLGGDTHTDVTMTLGHNVPHTTSTEIIRNIV-FDRAKG 314
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C+HGA ++D++++
Sbjct: 315 VFQGMIRVAPDAQKTDARMACNTLLMSDDAEFSVKPELEIFADDVQCAHGATVTDIQKNH 374
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERF 410
L+Y +RGI +TAR L+ F AE++E
Sbjct: 375 LYYLMSRGIPEKTARGLLINGFVAEIVEEL 404
>gi|408674679|ref|YP_006874427.1| FeS assembly protein SufD [Emticicia oligotrophica DSM 17448]
gi|387856303|gb|AFK04400.1| FeS assembly protein SufD [Emticicia oligotrophica DSM 17448]
Length = 443
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 122/225 (54%), Gaps = 5/225 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G + + N+V E+V+ + V + +QN+S + HI T V Q++ S + V+ G
Sbjct: 215 GEEAAFVNTVTEIVVAESAMVDYYKVQNESDKSYHIGTTQVYQKSNSYFYAATVTINGGF 274
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLG 318
R+N+++ G E+ + + L V + Q + + L+DH + C+ +L+K ++
Sbjct: 275 VRNNLNIVLDGEHVESHM--YGLYVPNGKQHVDNHTLVDHQKPNCQSNELYKGVLMDK-S 331
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
VF+G + V + AQ+T+A Q R+++ A +N KP L+I ADDVKCSHG L++
Sbjct: 332 TGVFNGKIFVRQDAQKTNAYQNCRNVVTSDDAIMNTKPQLEIWADDVKCSHGTTTGKLDD 391
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+FY Q+RGI + A + + +F +V+ + SIR + +
Sbjct: 392 EAIFYMQSRGIPKKEAIRLQLLAFAQDVVTQIKIDSIREYIEEQI 436
>gi|421853149|ref|ZP_16285828.1| iron-sulfur assembly protein SufD [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478609|dbj|GAB31031.1| iron-sulfur assembly protein SufD [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 427
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 171/384 (44%), Gaps = 63/384 (16%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP------ITRPSSSLD---VSTDA- 126
R ++ LL T P R E +++T + + + Q + S LD DA
Sbjct: 27 RQAAIGALLRTGLPDRHVEAWKYTSLRPLSAQEFQAPPAQYDAAQAKSLLDNLLSQHDAV 86
Query: 127 -QFPSLVLIDG-FIQNSALNLSNLPDGVYV------------------------------ 154
P +V ++G F+++ LS LP+GV V
Sbjct: 87 QALPRIVFVNGRFVKD----LSLLPEGVDVSFFSQNSLTSDVQASPDRDPLVALNTALVD 142
Query: 155 -GSLLGVSDGIMKRVSDFISEFQCGDLFWSIN-------GMGAPDLGVIYVPAEGNDCYW 206
G++L V+ G IS GD S + GA L ++ + A G Y+
Sbjct: 143 DGAILHVAKGADAGRVLLISLGVAGDTAISFHPRHSVVLEEGA-HLALLSLSA-GVGPYF 200
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
N V EV +G+ K+ H+ LQ + A + T V+ Y + G LSRH VH
Sbjct: 201 HNPVTEVTVGESAKLYHTTLQTEGPQAIALATTYVQVAGHGVYNSFALGLGSLLSRHEVH 260
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV-AHSLGQAVFD 323
+ P + ++ L Q D+ S ++ H C RQ + ++ H+ G VF
Sbjct: 261 ARLNAPHAQLHVNGAQNLAEHQVGDITS--VITHAASDCISRQTVRNVLDGHARG--VFQ 316
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G V V + AQ+TD Q+ ++LLL A ++ KP L+I ADDV+CSHGA + L++ QLFY
Sbjct: 317 GKVLVEQVAQKTDGYQMNQALLLSENAEIDAKPELEIYADDVRCSHGATVGALDDDQLFY 376
Query: 384 FQARGIDLETARKALVFSFGAEVI 407
++RG+ AR L+ +F E +
Sbjct: 377 MRSRGVPEAQARHILIAAFLDEAL 400
>gi|307131458|ref|YP_003883474.1| SufD protein [Dickeya dadantii 3937]
gi|306528987|gb|ADM98917.1| SufD protein [Dickeya dadantii 3937]
Length = 430
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
Y EG +++ + L + G+ + H L ++ ++ H +R A+
Sbjct: 193 YASLEGA-AHFSGARLTIDAGENSRTEHYKLGFEAADSYHFAHNDLRLARAAQLHSHSFL 251
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIV 313
G L+RH+ Q G ++S + ++ D +R L+H +G+ RQLHK IV
Sbjct: 252 LGAGLTRHHTSAQMNGEGVTLSMNSLMVPTGNEVCD--TRTYLEHNQGFGESRQLHKAIV 309
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ VF+G +KV A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 310 -RDRARGVFNGLIKVAPGALKTDGKMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATV 368
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A++ ++F+F AE+ E ++R+ V+ V
Sbjct: 369 GRIDEEQLFYLRSRGIGEQAAQQMIIFAFAAELTEAIRDDALRDAVLERV 418
>gi|424799368|ref|ZP_18224910.1| Iron-sulfur cluster assembly protein SufD [Cronobacter sakazakii
696]
gi|423235089|emb|CCK06780.1| Iron-sulfur cluster assembly protein SufD [Cronobacter sakazakii
696]
Length = 424
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + ++S L V+++ D +R L+H +GYC RQLHK IV
Sbjct: 250 GAGVLRHHTSTQLNGENITLRVNSLALPVNNEVCD--TRTWLEHNKGYCNSRQLHKTIV- 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AV G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 307 RDKGRAVKMGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ Q+FY ++RGI+ + A++ ++++F AE+ E +++ QV++ +
Sbjct: 367 RIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 415
>gi|390944982|ref|YP_006408743.1| Iron-regulated ABC transporter permease protein SufD [Belliella
baltica DSM 15883]
gi|390418410|gb|AFL85988.1| Iron-regulated ABC transporter permease protein SufD [Belliella
baltica DSM 15883]
Length = 425
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 182/416 (43%), Gaps = 58/416 (13%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
+++PQ + LR+SS + L P K+E ++FT S I T PS ++ +S+
Sbjct: 15 TNIPQYSSFEDLRNSSLEFLKKNGLPHLKEEEYKFTQISKKLEQNITAFT-PSKNISISS 73
Query: 125 -DAQFPSLVLIDG--FIQNSAL---NLSNLPDGVYVGSLLGVSDG-IMKRVSDFISEFQC 177
D + DG + N+ L LS++ Y S L S ++ ++ F S
Sbjct: 74 SDVKSNLFEGFDGDVIVFNNGLLDTQLSSISSKNYSFSKLSDSKSELLGNIATFES---- 129
Query: 178 GDLFWSINGMGAPD-------------------------LGVIYVP------AEGND--- 203
D F ++N +G D G I P AE +D
Sbjct: 130 -DPFTALNNIGFEDGLHIQTAKGKKVEKPIAFLLFNQANEGQIIQPRILIEVAENSDVTF 188
Query: 204 ----------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
Y++N+V+EV + + + LQN++ A + A + + V
Sbjct: 189 IENTISADEEAYFSNAVVEVKVAQNSHAYYYRLQNENRKAISVTNFATDIHRDATFTSVA 248
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
+ + R+N+ + L + +LL D H+ + P +L+K I+
Sbjct: 249 LQLQADMLRNNLTLNLLDKGCVGNMYGLYLLNGKTHVDNHTNVDHTKPNSDSNELYKGIL 308
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
S + VF+G + V + AQ+T+A Q ++LL A +N KP L+I ADDVKCSHG
Sbjct: 309 TDS-SRGVFNGKIFVRQDAQKTNAFQQNNNILLSENAIINTKPQLEIWADDVKCSHGCTT 367
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
L+E LFY QARGI E AR L+++ EV+E Y R+ + ++ +G+
Sbjct: 368 GQLDEEALFYLQARGIGKEQARGLLLYAVAGEVLEHIAYEPFRSYCIQLIEERLGS 423
>gi|114776744|ref|ZP_01451787.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
gi|114552830|gb|EAU55261.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
Length = 416
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 173/402 (43%), Gaps = 64/402 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK---------SSQIQPITRPSSSLDVS 123
LQ +RD + Q + P+ +DE +++TD S I+ S+ +P +S +
Sbjct: 5 LQHIRDEAWQAFEARGLPTTRDEDWKYTDISRIQALLGDQWWQSAATEPCD-AASFVIAK 63
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
DA +V+++G A S+LP V V SL + ++VS+ I+ D F S
Sbjct: 64 LDAY--RVVIVNGHFDAQA---SDLPASVSVKSLAAMIQDEPEQVSELITYRD--DAFLS 116
Query: 184 -----INGMGAPDLGVIYVP---------------------------------------- 198
N A D I VP
Sbjct: 117 NGIVAANSALASDGACICVPDNTRLDKPIHILNVNSGGTTHLRTGIHIGKQAQAEIIEHF 176
Query: 199 -AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
N+ +V + + +G ++ H LQ ++ H+ + Q+ S L G
Sbjct: 177 AGNHNNSGLTTAVTAIRLLEGARIEHYRLQMEAPKQCHLGRVEITQQRDSSCTLHATEIG 236
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 317
G +SR +V V+ L+ + + Q D H+R+ + P R+ ++ ++
Sbjct: 237 GMISRADVVVRLQQAGASCTLNGLFVAANRQHIDHHTRIDHNAPHCTSRENYRAVL-DGR 295
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
VF+G + V A +TD+ Q +LLL A ++ KP L+I DDVKC+HG + L+
Sbjct: 296 SHGVFNGKIVVAEGAIKTDSAQNNANLLLSQHAEIDTKPELEIYNDDVKCAHGVTVGQLD 355
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
++QLFY ++RG+ + AR+ L F+F EV+ + ++R V
Sbjct: 356 QNQLFYLKSRGLSDDEARQMLTFAFADEVLAKMSNQAVRRYV 397
>gi|254563304|ref|YP_003070399.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
gi|254270582|emb|CAX26585.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
Length = 440
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 162/404 (40%), Gaps = 60/404 (14%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--------DAQF 128
R+ + + +T PSR+ E F++TD + P PS + + +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGTTGFNEVEA 93
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYV---------------------------------- 154
L ++G + S +L +P+GV V
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRENPIYQLNTA 153
Query: 155 ----GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV-----IYVPAEG--ND 203
G+L+ V+ G + G+ +S D+G + EG
Sbjct: 154 FLADGALISVAPGAKPATPIHLRFVGTGEAAFSTATRVLVDVGAEAEFFLLESHEGPAGL 213
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y N L+V IG RH+ L + A + +VR + + E V + TG KLSRH
Sbjct: 214 TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVRLDARAQLETVNLVTGAKLSRH 273
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKCIV-AHSLGQA 320
+++ G D ++ LL Q D S LL DH G R++ K ++ S G
Sbjct: 274 QIYLHVAGEDANAVVNGATLLGHSQLAD--STLLADHAATGGVGREMFKTVIDGDSTG-- 329
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G + V + AQQTD + LLL + KP L+I ADDV C HGA +E
Sbjct: 330 VFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPELEIFADDVACGHGATCGAPDEDL 389
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
LFY ARG+ TA LV +F E +E + R ++ ++
Sbjct: 390 LFYLMARGLPRATAESLLVQAFVGEAVETVTHEGARAGLIGGIE 433
>gi|387791804|ref|YP_006256869.1| FeS assembly protein SufD [Solitalea canadensis DSM 3403]
gi|379654637|gb|AFD07693.1| FeS assembly protein SufD [Solitalea canadensis DSM 3403]
Length = 432
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 182/399 (45%), Gaps = 58/399 (14%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
SLP L + R ++ L +P+ K+E +++T + I + + T + S
Sbjct: 19 SLPVDLANAEQRKTALSNFLEGGFPTIKNEDWKYTSVNKIVNIPYELTTTSTGSFTQKEL 78
Query: 126 AQFPSLVLIDGFIQ---NSALN--LSNLPDGVYVGSLLGVSDGIMKRVSD--FISEFQCG 178
+QFP +D + Q N N LSN P ++ +SD K +++ F + +
Sbjct: 79 SQFP-FTNLDVYYQVFINGHYNARLSNFPSTENGLTISHLSDPAAKELANKYFNTVAKND 137
Query: 179 DLFWSINGMGAPDLGVIYV-PAEGND-----CYWANSVLE---------VVIGKGGKVRH 223
F S+N D +I++ P + D + A+S +E +V K +++
Sbjct: 138 SGFASLNTALTTDGTLIHLSPGKNLDKPLFLVFIADSRIETPLIQPRNIIVAEKNNELQL 197
Query: 224 SYL-----QNQSLNA----------AHIKWTAVRQETASGYELVE--------------- 253
L +NQSL AHI +T + E + Y +
Sbjct: 198 VELFLSIGENQSLTNSITEVLCGENAHIDYTKIHLEGDNNYHVATTQFELLRDASVSSHT 257
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKC 311
+S G R+N++ + L+ +L Q D H+ L+DH P Y +L+K
Sbjct: 258 LSIDGGFIRNNLNFVLKDKNCNVLLNGIYLPNRQQFMDNHT--LVDHASPECYSNELYKG 315
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
IV S G AVF+G + V R AQ+T+A Q ++LL +VN KP L+I ADDV+C+HGA
Sbjct: 316 IVNDS-GTAVFNGKIMVRRDAQKTNAYQRNMNMLLSTEGSVNTKPQLEIFADDVRCTHGA 374
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
++E +FY ++RG+ E A+ L+ +F E+IE
Sbjct: 375 TTGQIDEEAVFYLRSRGLSAENAKTLLMNAFADEIIEHL 413
>gi|163853378|ref|YP_001641421.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
gi|163664983|gb|ABY32350.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
Length = 440
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 162/404 (40%), Gaps = 60/404 (14%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS------ 130
R+ + + +T PSR+ E F++TD + P PS + A+
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAETTGFNAVEA 93
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYV---------------------------------- 154
L ++G + S +L +P+GV V
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRQNPIYQLNTA 153
Query: 155 ----GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV-----IYVPAEG--ND 203
G+L+ V+ G + G+ +S D+G + EG
Sbjct: 154 FLADGALISVAPGAKPATPIHLRFVGTGEAAFSTATRVLVDVGAEAEFFLLESHEGPAGL 213
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y N L+V IG RH+ L + A + +VR + + E V + TG KLSRH
Sbjct: 214 TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVRLDARAQLETVNLVTGAKLSRH 273
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKCIV-AHSLGQA 320
+++ G D ++ LL Q D S LL DH G R++ K ++ S G
Sbjct: 274 QIYLHVAGEDANAVVNGATLLGHGQLAD--STLLADHAATGGVGREMFKTVIDGDSTG-- 329
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G + V + AQQTD + LLL + KP L+I ADDV C HGA +E
Sbjct: 330 VFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPELEIFADDVACGHGATCGAPDEDL 389
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
LFY ARG+ TA LV +F E +E + R ++ ++
Sbjct: 390 LFYLMARGLPRATAESLLVQAFVGEAVETVTHEGARAVLIGGIE 433
>gi|365898208|ref|ZP_09436178.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
gi|365421018|emb|CCE08720.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
Length = 438
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 119/229 (51%), Gaps = 11/229 (4%)
Query: 197 VPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 256
V AEG + Y AN + IG G ++ H L + +A ++ V S L +++
Sbjct: 205 VAAEGANAYQANDAAVIWIGDGVELSHIRLMRDAPDAFNVTSNIVTVGARSKLNLFNMTS 264
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV- 313
GG +SR + G D+E ++ +LL Q D + L++DH C R+ + ++
Sbjct: 265 GGAVSRLQGFITLAGEDSELTVNGVNLLRGKQHGD--TTLVVDHAVPGCTSRENFRAVLD 322
Query: 314 --AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
AHS VF G + V A++TD +TR+LLL A + KP L+I ADDV C HGA
Sbjct: 323 DRAHS----VFQGRIIVRPDARKTDGKMMTRALLLSDEAEADNKPELEIFADDVSCGHGA 378
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVV 420
L+ES LFY +ARG+ + A+ LV +F E IE S+R +V+
Sbjct: 379 TSGALDESLLFYLRARGLPEKQAQALLVQAFVGEAIEAIEDESLRERVI 427
>gi|240140794|ref|YP_002965274.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
gi|418058018|ref|ZP_12696000.1| FeS assembly protein SufD [Methylobacterium extorquens DSM 13060]
gi|240010771|gb|ACS41997.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
gi|373568471|gb|EHP94418.1| FeS assembly protein SufD [Methylobacterium extorquens DSM 13060]
Length = 440
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 162/404 (40%), Gaps = 60/404 (14%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS--------TDAQF 128
R+ + + +T PSR+ E F++TD + P PS + + +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGTAGFNEVEA 93
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYV---------------------------------- 154
L ++G + S +L +P+GV V
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRENPIYQLNTA 153
Query: 155 ----GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV-----IYVPAEG--ND 203
G+L+ V+ G + G+ +S D+G + EG
Sbjct: 154 FLADGALISVAPGAKPATPIHLRFVGTGETAFSTATRVLVDVGAEAEFFLLESHEGPAGL 213
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y N L+V IG RH+ L + A + +VR + + E V + TG KLSRH
Sbjct: 214 TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVRLDARAQLETVNLVTGAKLSRH 273
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKCIV-AHSLGQA 320
+++ G D ++ LL Q D S LL DH G R++ K ++ S G
Sbjct: 274 QIYLHVAGEDANAVVNGATLLGHGQLAD--STLLADHAATGGVGREMFKTVIDGDSTG-- 329
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G + V + AQQTD + LLL + KP L+I ADDV C HGA +E
Sbjct: 330 VFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPELEIFADDVACGHGATCGAPDEDL 389
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
LFY ARG+ TA LV +F E +E + R ++ ++
Sbjct: 390 LFYLMARGLPRATAESLLVQAFVGEAVETVTHEGARAVLIGGIE 433
>gi|456353823|dbj|BAM88268.1| SufD, needed for fhuF Fe-S center production/stability [Agromonas
oligotrophica S58]
Length = 441
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 6/231 (2%)
Query: 200 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
+G+D Y N+ +++V+G ++ H + ++ +A HI + + + GG
Sbjct: 212 DGSD-YQVNTAMQLVVGDEARIDHIKVVSEGTSALHISSLLANIGARATFNQLGFVAGGS 270
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 317
L R+ + V G T ++ LL Q D + L ++H C R+ K +V S
Sbjct: 271 LVRNQLFVHIAGEGTIADIRGGSLLSGTQHAD--TTLAIEHAAENCQSRETFKAVVGDS- 327
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
+AVF G + VN AQ+TDA ++R+LLL A + KP L+I ADDV+C HG ++
Sbjct: 328 ARAVFQGKITVNPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAID 387
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+ LFY ARGI + AR L+ +F E+IE S+R + + +G
Sbjct: 388 DELLFYLMARGIPPKEARALLIQAFIGEIIEGAANESVRTALTEAMLGWLG 438
>gi|354593917|ref|ZP_09011960.1| hypothetical protein CIN_06560 [Commensalibacter intestini A911]
gi|353673028|gb|EHD14724.1| hypothetical protein CIN_06560 [Commensalibacter intestini A911]
Length = 426
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 116/224 (51%), Gaps = 6/224 (2%)
Query: 192 LGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
L VI + A G+ Y+ N V EV +G G ++ L N SL + + V + Y
Sbjct: 188 LSVIEINA-GSGEYFTNPVCEVTVGSGADFEYNKLLNSSLESYNCANLYVSLADHAKYRQ 246
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLH 309
+S G K SR V++ G + + L Q D+ + + H +C+ Q
Sbjct: 247 FLISKGSKFSRQEVYIDMNGEWSNASFQAVQKLGDRQHADITT--VFSHLVPHCQSDQNV 304
Query: 310 KCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
K I++ VF G V V++ AQ+T+A Q ++LLL +A +N KP L+I ADDVKCSH
Sbjct: 305 KNILSDQ-SHGVFQGKVFVHQKAQKTNAQQQNQALLLSDQAEINTKPELEIYADDVKCSH 363
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
GA + L+E QLF+ ARGI + AR L+ +F A+ +E P
Sbjct: 364 GATVGALDEDQLFFLMARGIPYDQARDILINAFVAQAVEDIDDP 407
>gi|421849591|ref|ZP_16282569.1| iron-sulfur assembly protein SufD [Acetobacter pasteurianus NBRC
101655]
gi|371459652|dbj|GAB27772.1| iron-sulfur assembly protein SufD [Acetobacter pasteurianus NBRC
101655]
Length = 427
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 7/206 (3%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y+ N V EV +G+ K+ H+ LQ + A + T V+ Y + G LSRH
Sbjct: 199 YFHNPVTEVTVGESAKLYHTTLQTEGPQAIALATTYVQVAGHGVYNSFALGLGSLLSRHE 258
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV-AHSLGQAV 321
VH + P + ++ L Q D+ S ++ H C RQ + ++ H+ G V
Sbjct: 259 VHARLNAPHAQLHVNGAQNLAEHQVGDITS--VITHAASDCISRQTVRNVLDGHARG--V 314
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G V V + AQ+TD Q+ ++LLL A ++ KP L+I ADDV+CSHGA + L++ QL
Sbjct: 315 FQGKVLVEQVAQKTDGYQMNQALLLSENAEIDAKPELEIYADDVRCSHGATVGALDDDQL 374
Query: 382 FYFQARGIDLETARKALVFSFGAEVI 407
FY ++RG+ AR L+ +F E +
Sbjct: 375 FYMRSRGVPEAQARHILIAAFLDEAL 400
>gi|313206630|ref|YP_004045807.1| fes assembly protein sufd [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|383485936|ref|YP_005394848.1| fes assembly protein sufd [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|386321386|ref|YP_006017548.1| Fe-S cluster assembly ABC transporter permease [Riemerella
anatipestifer RA-GD]
gi|312445946|gb|ADQ82301.1| FeS assembly protein SufD [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|325335929|gb|ADZ12203.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Riemerella anatipestifer RA-GD]
gi|380460621|gb|AFD56305.1| fes assembly protein sufd [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
Length = 426
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 183/408 (44%), Gaps = 60/408 (14%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
SL +++ + SSSL + ++ + LS +PS+KDE +++T+ I Q Q +
Sbjct: 2 SLFENIKTHSSSLSGD------KLNALERFLSKGFPSKKDEEYKYTNLKEIIEKQYQFLP 55
Query: 115 RPSSSLDVST-------DAQFPSLVLIDGF------------IQNSALN--LSNLPDGV- 152
+ + + F +VL++G I+ AL LSN +G
Sbjct: 56 QEEHHISEEELKALRLGEEDFDWVVLVNGKWCPELSKISDKDIKVLALEEALSNGENGAL 115
Query: 153 ---YVGSLLGVS------------DGIMKRVSD-----------FISEFQCGDLFWSING 186
Y ++ S G+ V +IS+ Q + F++
Sbjct: 116 FRPYFNTIANESWAFPNLNLAFAHSGVALYVPKNTVVEKPIHIFYISQNQSENTFYNPRN 175
Query: 187 MGAPDLG----VIYVPAEGNDCY-WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 241
+ + G VI +D + + NS+ E+ K LQN + + + T V
Sbjct: 176 ILVVEAGSQIEVIESHHNFDDSFTFTNSLTEIFTKPNAKADWHKLQNDTDTSYLVDHTFV 235
Query: 242 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 301
+QE S + S GGKL R+N+ Q G + + ++ ++ DQ D H+ + + P
Sbjct: 236 KQERDSLATVNTFSFGGKLVRNNLDFIQEGENINSFMNGITIIGKDQLVDHHTAVHHNQP 295
Query: 302 RGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 361
Q +K + + VF+G V V++ AQ+T+A Q ++LL AT++ KP L+I
Sbjct: 296 NCESYQNYKGVFKDN-AHGVFNGKVFVDKIAQKTNAYQQNNNILLSEGATIDSKPQLEIF 354
Query: 362 ADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIER 409
ADDVKCSHG + L E LFY +ARGI A+ L+++F + +E
Sbjct: 355 ADDVKCSHGCTVGQLNEDALFYLRARGISKNEAQALLLYAFANDAMEN 402
>gi|258542736|ref|YP_003188169.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01]
gi|384042657|ref|YP_005481401.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-12]
gi|384051174|ref|YP_005478237.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-03]
gi|384054282|ref|YP_005487376.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-07]
gi|384057516|ref|YP_005490183.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-22]
gi|384060157|ref|YP_005499285.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-26]
gi|384063449|ref|YP_005484091.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-32]
gi|384119459|ref|YP_005502083.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256633814|dbj|BAH99789.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01]
gi|256636873|dbj|BAI02842.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-03]
gi|256639926|dbj|BAI05888.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-07]
gi|256642982|dbj|BAI08937.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-22]
gi|256646037|dbj|BAI11985.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-26]
gi|256649090|dbj|BAI15031.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-32]
gi|256652077|dbj|BAI18011.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655134|dbj|BAI21061.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-12]
Length = 420
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 171/384 (44%), Gaps = 63/384 (16%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP------ITRPSSSLD---VSTDA- 126
R ++ LL T P R E +++T + + + Q + S LD DA
Sbjct: 20 RQAAIGALLRTGLPDRHVEAWKYTSLRPLSAQEFQAPPAQYDAVQAKSLLDNLLSQHDAV 79
Query: 127 -QFPSLVLIDG-FIQNSALNLSNLPDGVYV------------------------------ 154
P +V ++G F+++ LS LP+GV V
Sbjct: 80 QALPHIVFVNGRFVKD----LSLLPEGVDVSFFSQNSLTSDVQASPDRDPLVALNTALVD 135
Query: 155 -GSLLGVSDGIMKRVSDFISEFQCGDLFWSIN-------GMGAPDLGVIYVPAEGNDCYW 206
G++L V+ G IS GD S + GA L ++ + A G Y+
Sbjct: 136 DGAILHVAKGADAGRVLLISLGVAGDTAISFHPRHSVVLEEGA-HLSLLSLSA-GVGPYF 193
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
N V EV +G+ K+ H+ LQ + A + T V+ Y + G LSRH VH
Sbjct: 194 HNPVTEVTVGESAKLYHTTLQTEGPQAIALATTYVQVAGHGVYNSFALGLGSLLSRHEVH 253
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV-AHSLGQAVFD 323
+ P + ++ L Q D+ S ++ H C RQ + ++ H+ G VF
Sbjct: 254 ARLNAPHAQLHVNGAQNLAEHQVGDITS--VITHAASDCISRQTVRNVLDGHARG--VFQ 309
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G V V + AQ+TD Q+ ++LLL A ++ KP L+I ADDV+CSHGA + L++ QLFY
Sbjct: 310 GKVLVEQVAQKTDGYQMNQALLLSENAEIDAKPELEIYADDVRCSHGATVGALDDDQLFY 369
Query: 384 FQARGIDLETARKALVFSFGAEVI 407
++RG+ AR L+ +F E +
Sbjct: 370 MRSRGVPEAQARHILIAAFLDEAL 393
>gi|254526988|ref|ZP_05139040.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9202]
gi|221538412|gb|EEE40865.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9202]
Length = 405
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 8/195 (4%)
Query: 224 SYLQNQS--LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 281
SY +N+S LN+ + V Q S Y L + +R + ++Q + +T +
Sbjct: 206 SYGENKSNLLNSLN-----VIQHKNSEYNLGSLHYKFNYARFEISIKQSAGNAKTNIKGM 260
Query: 282 HLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLT 341
+ D+ +++ + P G+ Q++K + A A+F+G++ V + AQ+TDA QL+
Sbjct: 261 QITKKDEQISTFTKIDFNGPNGFLDQINKSL-ADDKSHAIFEGSIIVPKIAQKTDASQLS 319
Query: 342 RSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFS 401
R+LLL A ++ KP L+IIADDVKC HGA IS L E +LFY + RGI L+ A K + S
Sbjct: 320 RNLLLSNFAKIDTKPQLEIIADDVKCKHGATISQLNEEELFYMRTRGITLQEASKLQLSS 379
Query: 402 FGAEVIERFPYPSIR 416
+ EVI P R
Sbjct: 380 YFQEVISFIPVSKER 394
>gi|407451526|ref|YP_006723250.1| hypothetical protein B739_0750 [Riemerella anatipestifer RA-CH-1]
gi|403312511|gb|AFR35352.1| hypothetical protein B739_0750 [Riemerella anatipestifer RA-CH-1]
Length = 426
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 108/204 (52%), Gaps = 1/204 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NS+ E+ K LQN + + + T V+QE S + S GGKL R+N+
Sbjct: 200 FTNSLTEIFTKPNAKADWHKLQNDTDTSYLVDHTFVKQEKDSLATVNTFSFGGKLVRNNL 259
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
Q G + + ++ ++ DQ D H+ + + P Q +K + + VF+G
Sbjct: 260 DFIQEGENINSFMNGITIIGKDQLVDHHTAVHHNQPNCESYQNYKGVFKDN-AHGVFNGK 318
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V++ AQ+T+A Q ++LL AT++ KP L+I ADDVKCSHG + L E LFY +
Sbjct: 319 VFVDKIAQKTNAYQQNNNILLSEGATIDSKPQLEIFADDVKCSHGCTVGQLNEDALFYLR 378
Query: 386 ARGIDLETARKALVFSFGAEVIER 409
ARGI A+ L+++F + +E
Sbjct: 379 ARGISKNEAQALLLYAFANDAMEN 402
>gi|218532235|ref|YP_002423051.1| FeS assembly protein SufD [Methylobacterium extorquens CM4]
gi|218524538|gb|ACK85123.1| FeS assembly protein SufD [Methylobacterium extorquens CM4]
Length = 440
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 164/404 (40%), Gaps = 60/404 (14%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVSTDAQFPS--- 130
R+ + + +T PSR+ E F++TD + P PS + V+ F +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGTTGFNAVEA 93
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYV---------------------------------- 154
L ++G + S +L +P+GV V
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRENPIYQLNTA 153
Query: 155 ----GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV-----IYVPAEG--ND 203
G+L+ V+ G + G+ +S D+G + EG
Sbjct: 154 FLADGALISVAPGAKPATPIHLRFVGTGEAAFSTATRVLVDVGAEAEFFLLESHEGPAGL 213
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y N L+V IG RH+ L + A + +VR + + E V + TG KLSRH
Sbjct: 214 TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVRLDARAELETVNLVTGAKLSRH 273
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKCIV-AHSLGQA 320
+++ G D ++ LL Q D S LL DH G R++ K ++ S G
Sbjct: 274 QIYLHVAGEDANAVVNGATLLGHGQLAD--STLLADHAATGGVGREMFKTVIDGDSTG-- 329
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G + V + AQQTD + LLL + KP L+I ADDV C HGA +E
Sbjct: 330 VFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPELEIFADDVACGHGATCGAPDEDL 389
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
LFY ARG+ TA LV +F E +E + R ++ ++
Sbjct: 390 LFYLMARGLPRATAESLLVQAFVGEAVETVTHEGARAVLIGGIE 433
>gi|398380046|ref|ZP_10538164.1| FeS assembly protein SufD [Rhizobium sp. AP16]
gi|397721362|gb|EJK81910.1| FeS assembly protein SufD [Rhizobium sp. AP16]
Length = 424
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 1/203 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
+S+ ++ +GKG +V LQ Q H+ V + +L ++ GGKL R +H+
Sbjct: 202 SSISDITVGKGAEVTWIILQEQGSEDTHLGQIRVDLGQDAKLKLFVINAGGKLVRQELHI 261
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
+ G E L +LL D D+ L D P ++ + +V + VF G ++
Sbjct: 262 KVSGEGAELSLRGVNLLGGDTHTDVTMVLGHDVPHTSSTEIVRNVV-FDRARGVFQGMIR 320
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L+Y AR
Sbjct: 321 VAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVADIDSNHLYYLMAR 380
Query: 388 GIDLETARKALVFSFGAEVIERF 410
GI AR LV +F AE++E
Sbjct: 381 GIPKNKARAMLVNAFVAEIVEEL 403
>gi|307544376|ref|YP_003896855.1| Fe-S cluster assembly protein SufD [Halomonas elongata DSM 2581]
gi|307216400|emb|CBV41670.1| K09015 Fe-S cluster assembly protein SufD [Halomonas elongata DSM
2581]
Length = 448
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
E + N V E+++ +G + H LQ L HI V Q S Y ++ GG
Sbjct: 202 GEAEAANFTNLVEEIILERGAILTHYKLQEAPLKDRHIASIHVEQARDSRYVSFNLNLGG 261
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
L R+++ + G E + Q D H+ + + PR + R+ +K I+
Sbjct: 262 GLVRNDLVSELNGEGAEAIYNGLFYGQGRQHVDNHTLVNHNAPRTFSRENYKGIL-DDRA 320
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
VF+G V V R +QQ +A Q +LLL RA ++ KP L+I ADDVKC+HGA L+E
Sbjct: 321 HGVFNGKVIVKRDSQQIEADQSNANLLLSDRAEIDTKPELEIYADDVKCAHGATTGQLDE 380
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
++ + RGID +TAR L +F EV+E ++ +V
Sbjct: 381 EAVYALRTRGIDEQTARGLLTLAFAGEVMELVDLDAVSERV 421
>gi|375013273|ref|YP_004990261.1| FeS assembly protein SufD [Owenweeksia hongkongensis DSM 17368]
gi|359349197|gb|AEV33616.1| FeS assembly protein SufD [Owenweeksia hongkongensis DSM 17368]
Length = 439
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 5/218 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+ E+ K ++ + +QN ++ A+ I T V+Q S + S G + R+N++
Sbjct: 213 NTATEIFAEKNSRLFYYKVQNDNMEASIIDSTTVKQAEGSNVRVGTFSFGNRFIRNNLNF 272
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGN 325
G E+ L ++ Q D H+ L DH + C +L+K I + VF+G
Sbjct: 273 FLEGEHIESHLDGITVINEGQFVDQHT--LADHQKPNCESHELYKGIYDGN-ASGVFNGK 329
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V+ +AQ+T+A Q ++LL +A+++ KP L+I ADDV+CSHG I L E +FY Q
Sbjct: 330 VMVHPHAQKTNAFQQNNNILLTDKASIDTKPQLEIYADDVQCSHGCTIGQLNEDAMFYMQ 389
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
ARGI + A+ L+++F + + P +R ++ +
Sbjct: 390 ARGIPEKEAKALLLYAFANDGLRNVAIPELRKKLNKQI 427
>gi|222086101|ref|YP_002544633.1| FeS assembly protein SufD [Agrobacterium radiobacter K84]
gi|221723549|gb|ACM26705.1| FeS assembly protein SufD [Agrobacterium radiobacter K84]
Length = 424
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 1/203 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
+S+ ++ +GKG +V LQ Q H+ V + +L ++ GGKL R +H+
Sbjct: 202 SSISDITVGKGAEVTWIILQEQGSEDTHLGQIRVDLGQDAKLKLFVINAGGKLVRQELHI 261
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
+ G E L +LL D D+ L D P ++ + +V + VF G ++
Sbjct: 262 KVSGEGAELSLRGVNLLGGDTHTDVTMVLGHDVPHTSSTEIVRNVV-FDRARGVFQGMIR 320
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L+Y AR
Sbjct: 321 VAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVADIDSNHLYYLMAR 380
Query: 388 GIDLETARKALVFSFGAEVIERF 410
GI AR LV +F AE++E
Sbjct: 381 GIPKNKARAMLVNAFVAEIVEEL 403
>gi|406597511|ref|YP_006748641.1| cysteine desulfurase activator SufB [Alteromonas macleodii ATCC
27126]
gi|406374832|gb|AFS38087.1| cysteine desulfurase activator SufB [Alteromonas macleodii ATCC
27126]
Length = 418
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 176/390 (45%), Gaps = 52/390 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + + L + WP+R++E +RFT + ++ + +Q + P ++D +
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKREAKQAVQADSLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSD-------------FISEF 175
LV +DG + + +N N+P G+ + SL + +S +++
Sbjct: 75 IDLVFVDGVLV-TQVNTLNVPAGMSITSLNNDDTATQQAISSVYGQVKPTRHMFGLVNDA 133
Query: 176 QCG-DLFWSINGMGAPD--LGVIYVPAEGNDCYWANSVLEVVIGKGGKV-RHSYLQNQSL 231
C +F ++ D + ++ + ++ D + V++V G V + +SL
Sbjct: 134 LCQHGIFINVEAGARIDTPIRIVNMASQNVDAH-TRVVVKVAEGASATVIEQGFGDTESL 192
Query: 232 NAAHIKWT-----------------AVRQETASGYEL--------VEVSTGGKLSRHNVH 266
A ++ +Q S ++L V G +LSR +V
Sbjct: 193 TTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNSTMVGYGSELSRLDVD 252
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 326
+ G + ++++ +LL + DLHS + P G + + IV +AVF+G +
Sbjct: 253 IHHAGEFADAKMNAIYLLAEGELFDLHSTIEHAMPNGTTEENARGIVGDK-ARAVFNGRI 311
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
++R AQ+T A R+LLL R +N KP L+I ADDVKC+HGA ++++EE L+Y
Sbjct: 312 HIHRDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVKCAHGATVAEIEEEALYYMLT 371
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIR 416
RG+ A F F E+I P ++R
Sbjct: 372 RGVSRSKALVMFNFGFIQELINDVPNAAVR 401
>gi|251789308|ref|YP_003004029.1| FeS assembly protein SufD [Dickeya zeae Ech1591]
gi|247537929|gb|ACT06550.1| FeS assembly protein SufD [Dickeya zeae Ech1591]
Length = 430
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 5/240 (2%)
Query: 186 GMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 245
G GA + + + +++ + L + G+ V H L ++ ++ H +R
Sbjct: 182 GAGASATLIEHYASLAGAAHFSGARLTIDAGENSVVEHYKLGFEATDSYHFAHNDLRLAQ 241
Query: 246 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY- 304
A+ G L+RH+ Q G ++S + ++ D +R L+H +G+
Sbjct: 242 AAQLHSHSFLLGAGLTRHHTSAQMNGEGATLSMNSLMVPTGNEVCD--TRTYLEHNQGFG 299
Query: 305 -CRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
RQLHK IV + VF+G +KV A +TD +LLL A V+ KP L+I AD
Sbjct: 300 ESRQLHKAIV-RDRARGVFNGLIKVAPGALKTDGKMTNNNLLLGRLAEVDTKPQLEIYAD 358
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
DVKCSHGA + ++E QLFY ++RGI + A++ ++F+F AE+ E +R+ V++ V
Sbjct: 359 DVKCSHGATVGRIDEDQLFYLRSRGIGEQAAQQMIIFAFAAELTEAIHDDRLRDAVLARV 418
>gi|37520941|ref|NP_924318.1| hypothetical protein glr1372 [Gloeobacter violaceus PCC 7421]
gi|35211936|dbj|BAC89313.1| glr1372 [Gloeobacter violaceus PCC 7421]
Length = 444
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 1/219 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G ++ V V +G + H L ++ A H+ + VR + ++ + GG L
Sbjct: 208 GAGVHFTCPVGAVDVGADADLDHYRLGQENAAAFHLATSRVRLGRDARFKSLAFVAGGGL 267
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
RH++ + GP +E L +L + D H + P RQ++K I+A +A
Sbjct: 268 VRHDLFAELAGPGSEATLHGLYLAGGTRHVDHHLWVRHSAPHAASRQIYKGILA-GRARA 326
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF+GNV V A +TDA Q R+LLL A V+ P L+I A DV+C+HG+ + L+E
Sbjct: 327 VFNGNVFVASEAAKTDAKQTNRNLLLSDAALVHSNPQLEIYAGDVRCTHGSTVGQLDEEA 386
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
LFY ++RG+D A+ L +F ++ E ++R+++
Sbjct: 387 LFYLRSRGLDEAQAKNLLTRAFAGDLFEDIRLAALRDRL 425
>gi|408380481|ref|ZP_11178065.1| FeS assembly protein SufD [Agrobacterium albertimagni AOL15]
gi|407745694|gb|EKF57226.1| FeS assembly protein SufD [Agrobacterium albertimagni AOL15]
Length = 425
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 169/391 (43%), Gaps = 38/391 (9%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI---------- 105
L D+ + SLP + RD L P+R+ E F +TD +
Sbjct: 16 LIDAYTNQIGSLPGDGAVLLKRDGLFDALKRQGLPTRRVETFHYTDLKALLRALPADEPQ 75
Query: 106 -KSSQIQPITRPSSSLDVSTD-AQFPSLVLIDGF---IQNSALNLSNLPDGVY------- 153
+ + P+ + L+V AQ PS L DG + AL+ DG+
Sbjct: 76 AVAKTVDPLVSGAHVLNVLQGVAQRPS-ALPDGLSIALYRDALSTGAAADGLTAFNADDT 134
Query: 154 VGSLLG--VSDGIMKRVSD---------FISEFQCGDL---FWSINGMGAPDLGVIYVPA 199
+G L G V DG V++ S G L F + G G+ +
Sbjct: 135 IGRLNGAFVRDGFTLDVAEDTEIEAPIELQSVHAAGQLHLRFPATFGKGSKATVIERHVG 194
Query: 200 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
+ A+ V ++ +G+G ++ LQ + H+ T + + L V+ GGK
Sbjct: 195 QSGSAALASVVADLKLGEGAEITWIILQGEGDADTHLGQIRAELGTDAKFRLFIVNAGGK 254
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L R VHV+ G ++ L +LL D D+ L D P ++ + +V
Sbjct: 255 LVRQEVHVKTAGEGSDFMLRGVNLLGGDTHTDVTMTLGHDVPNTTSTEIIRNVV-FDRAH 313
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
VF G ++V AQ+TDA +LL+ +VKP L+I ADDV+C+HGA ++D+ +S
Sbjct: 314 GVFQGMIRVAPDAQKTDARMACNTLLMSDDCEFSVKPELEIFADDVQCAHGATVADIHKS 373
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERF 410
L+Y +RGI + AR L+ F AE++E
Sbjct: 374 HLYYLMSRGIPEKKARALLINGFVAEIVEEL 404
>gi|417104050|ref|ZP_11961280.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
gi|327191055|gb|EGE58108.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
Length = 424
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 1/209 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + + + ++ +GKG ++ LQ Q + AH+ + + L ++ GGKL
Sbjct: 196 GDAAFVSHISDITVGKGTELTWIILQQQGADDAHLGQIRIDLGADAKLRLFVINAGGKLV 255
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +H++ G + L +LL +D D+ L D P ++ + +V + V
Sbjct: 256 RQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGV 314
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L
Sbjct: 315 FQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHL 374
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERF 410
+Y ARGI AR LV +F AE++E
Sbjct: 375 YYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|113953876|ref|YP_731675.1| FeS assembly protein SufD [Synechococcus sp. CC9311]
gi|113881227|gb|ABI46185.1| FeS assembly protein SufD [Synechococcus sp. CC9311]
Length = 410
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 1/202 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
+LE+ +G+ KV H L A + AV QE+ S Y LV VS G R + Q
Sbjct: 191 LLEIHLGQESKVNHGLLALGDGQEALLANLAVEQESRSHYSLVSVSQGWLFGRLEPSLVQ 250
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
+ + + +D+ +H+ + + P G Q+ K I A ++F+G ++V
Sbjct: 251 VDGQASASIHGLSVTAADEQFAVHTAMRFEGPEGTLDQVQKTIAADR-SHSIFNGAIQVP 309
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+T+A QL+RSLLL RA V+ KP L+I+ADDV+C+HGA +S L+E QLFY ++RGI
Sbjct: 310 RPAQRTNASQLSRSLLLSGRARVDAKPELEIVADDVRCTHGATVSQLQEDQLFYLRSRGI 369
Query: 390 DLETARKALVFSFGAEVIERFP 411
+A L+ + +V++R P
Sbjct: 370 TQSSAAALLLRGYCQDVLDRLP 391
>gi|421724233|ref|ZP_16163466.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
oxytoca M5al]
gi|410374989|gb|EKP29637.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
oxytoca M5al]
Length = 424
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ + G ++ ++S + V+ + D SR LDH GYC RQLHK IV
Sbjct: 250 GSAVLRHHTSTRLNGENSNLRINSLAMPVNGEVCD--SRTWLDHKVGYCNSRQLHKTIV- 306
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ G+AVF+G + V +A +TD +LLL + V+ KP L+I ADDVKCSHGA I
Sbjct: 307 NDKGRAVFNGLINVAPHAIKTDGQMTNNNLLLGRLSEVDTKPQLEIYADDVKCSHGATIG 366
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
+++ QLFY ++RGI + A++ ++++F AE+ E ++R Q+++ +
Sbjct: 367 RIDDEQLFYLRSRGITQQAAQQMILYAFAAELTEAKDDEALRQQILARI 415
>gi|92113361|ref|YP_573289.1| FeS assembly protein SufD [Chromohalobacter salexigens DSM 3043]
gi|91796451|gb|ABE58590.1| Iron-regulated ABC transporter permease protein SufD
[Chromohalobacter salexigens DSM 3043]
Length = 445
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 168/404 (41%), Gaps = 56/404 (13%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDV 122
+P + R + + + +P+++DE +++TD I + +L +
Sbjct: 18 EPTWVTARRQAGAARFEALGFPTKRDEAWKYTDVRRIAEGEFALTYDAELSASRFEALSM 77
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGV------------------YVGSLLGV---- 160
DA LV +DG + ++ LP+G+ +G L GV
Sbjct: 78 PLDAY--RLVFVDGVFSTALSDVEALPEGISIEPLTTAMRTNHEAIGGAIGRLAGVDFSP 135
Query: 161 ---------SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLG----------------VI 195
+G + R+ + + + ++ AP + +
Sbjct: 136 FTALNVALSEEGAVVRIGQGVVVDKPIYVVFASRANEAPRMSHPRVLVMAGARSQSTVIE 195
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+ E + N V EV++ +G V H LQ S H+ V Q S + ++
Sbjct: 196 HYAGETGAANFTNVVSEVMLERGAIVDHYKLQEASSEDLHVASIHVEQARDSRFTSFNLN 255
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
GG L R ++ E + + Q D H+ + + P+ + + +K I+ +
Sbjct: 256 LGGALVRTDLVTDLNAQGAEANYNGLFFVQGRQHVDNHTLVNHNAPQTFSNENYKGIL-N 314
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
+ VF+G V V R +QQ +A Q +LLL RA ++ KP L+I ADDVKCSHG
Sbjct: 315 DRARGVFNGKVIVKRDSQQIEAYQNNANLLLSDRAEIDTKPELEIYADDVKCSHGTTTGQ 374
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
L+E +F + RGID + AR L +F EV+++ P+I +V
Sbjct: 375 LDEEAVFALRTRGIDEQMARGLLTLAFAGEVMDQVRLPAIAERV 418
>gi|254447152|ref|ZP_05060619.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
gi|198263291|gb|EDY87569.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
Length = 439
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 190/415 (45%), Gaps = 61/415 (14%)
Query: 61 PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL 120
P+ +S+LP PL K RD ++ L + P+R+ E ++++ ++ QI TR ++
Sbjct: 17 PAHTSALPAPLA--KWRDEAAPHLSALTLPTRRTENWKYSYRALKLDDQIAQ-TRTNAPQ 73
Query: 121 DVSTDAQFPS------LVLIDGFIQNSA-----------LNLSNLPD------GVYVGSL 157
S D+ P LV+ +G+I SA L S L D +GS
Sbjct: 74 TDSADS-VPHHGLGYRLVIRNGWIDRSASRLPQQSGIELLAFSELDDLQAQALAGKLGSC 132
Query: 158 LG-------------VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA----- 199
L ++DG++ R++ Q L+ +I+G I++ A
Sbjct: 133 LDAKTTQLAVLNQAHLADGLVIRLAKGAVLDQ--PLYLAIHGDAGASYPRIWLEAAENSQ 190
Query: 200 ---------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 250
EG D N+ +E+ + V L ++ ++ HI T + E
Sbjct: 191 IAVVEEYSSEGADPTLTNAAVEMTLAANAHVNWVRLALEAEHSQHIGATGAVLAQHARLE 250
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 308
+ GG+L RH++ V+ E +L+ + Q D H+ +++H +C +
Sbjct: 251 HHHIGFGGQLRRHDLQVRLEESGAECKLNGVAVTQGRQHFDNHT--VIEHIAPHCNSEET 308
Query: 309 HKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCS 368
++ I A A+F+G + +++ AQ++ A ++LLL A ++ KP L+I ADDVKC+
Sbjct: 309 YRNIAA-DRSHAIFNGRIHIHQDAQKSLAEMNNKNLLLSNGAEIDTKPELEIYADDVKCA 367
Query: 369 HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
HGA I L+E LFY ARGI+ A+ L +F E+++ P ++R V H+
Sbjct: 368 HGATIGRLDEKSLFYLVARGINRLDAKALLSMAFINELVDEVPIDNVREAVDEHL 422
>gi|359407358|ref|ZP_09199835.1| FeS assembly protein SufD, group 1 [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356677397|gb|EHI49741.1| FeS assembly protein SufD, group 1 [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 410
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 5/203 (2%)
Query: 213 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 272
V +G ++ H Q++ H+ T R + + VS GG+++R H
Sbjct: 190 VRLGADARLDHIKFQDEGEQTTHLGLTLFRLDHQANINSFAVSKGGQMARMETHCFFAAS 249
Query: 273 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 330
D E +S+ +L Q D+ + ++ H C RQL + ++ + VF G V+V
Sbjct: 250 DAEAAMSAVYLGQGSQHHDITT--VVSHEMRDCASRQLIRGVLDDK-ARGVFQGRVRVAP 306
Query: 331 YAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGID 390
AQ+TD Q++R+LLL A + KP L+I ADDV CSHGA + +L+E+ LFY ++RGI
Sbjct: 307 DAQKTDGQQMSRALLLSRDAEADAKPELEIFADDVVCSHGATVGELDETLLFYLKSRGIG 366
Query: 391 LETARKALVFSFGAEVIERFPYP 413
+ AR L+ +F + +E YP
Sbjct: 367 EKQARTMLIDAFLVDTLEEISYP 389
>gi|312129604|ref|YP_003996944.1| iron-regulated ABC transporter permease sufd [Leadbetterella
byssophila DSM 17132]
gi|311906150|gb|ADQ16591.1| Iron-regulated ABC transporter permease protein SufD
[Leadbetterella byssophila DSM 17132]
Length = 432
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 5/221 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G + N+V E+ + + +V + +Q+++ + H+ T V Q+ S + V+ G
Sbjct: 205 GEQAAFTNAVSEIFVAEDARVDYYKIQDENDASYHVGTTQVVQKDKSYFYAATVTVNGGF 264
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 318
R+N+++ G E+ + ++ +Q D H+ L+DH P +L+K I+
Sbjct: 265 VRNNLNLVLDGEYIESHMYGLYIPNGNQLVDNHT--LVDHRKPNSESNELYKGIL-DGKS 321
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ VF+G + V + AQ+T+A Q R+++L A++N KP L+I ADDVKCSHG L+E
Sbjct: 322 KGVFNGKIYVQQDAQKTNAYQNCRNVILSDSASMNTKPQLEIWADDVKCSHGTTTGKLDE 381
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+FY Q+RGI A K + +F +V+ +F + ++R ++
Sbjct: 382 EAIFYMQSRGIPKAEAVKLQLAAFAEDVVSQFKWETLREEL 422
>gi|423123359|ref|ZP_17111038.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5250]
gi|376401990|gb|EHT14591.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5250]
Length = 424
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 101/164 (61%), Gaps = 5/164 (3%)
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RH+ + G ++ ++S + V+ + D SR LDH GYC RQLHK IV + G+
Sbjct: 255 RHHTSTRLNGENSNLRINSLAMPVNGEVCD--SRTWLDHKVGYCNSRQLHKTIV-NDKGR 311
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G + V +A +TD +LLL + V+ KP L+I ADDVKCSHGA I +++
Sbjct: 312 AVFNGLINVAPHAIKTDGQMTNNNLLLGRLSEVDTKPQLEIYADDVKCSHGATIGRIDDE 371
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY ++RGI + A++ ++++F AE+ E ++R Q+++ +
Sbjct: 372 QLFYLRSRGITQQAAQQMILYAFAAELTEAIGDEALRQQILARI 415
>gi|153947648|ref|YP_001400719.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis IP 31758]
gi|152959143|gb|ABS46604.1| FeS assembly protein SufD [Yersinia pseudotuberculosis IP 31758]
Length = 441
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 11/224 (4%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
++ + L + +G ++ H L + S + AH R A + + G L+
Sbjct: 215 HFTGARLTISLGDNAELNHCKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGLT 271
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G+
Sbjct: 272 RHNTSSQLNGEGSSLSINSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMVR-ERGK 328
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
A+F+G +KV ++A +TD +LLL A V+ KP L+I ADDVKCSHGA + ++
Sbjct: 329 AIFNGMIKVAKHALKTDGQMTNNNLLLSNLAEVDTKPQLEIYADDVKCSHGATVGRIDAE 388
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY Q+RGI+ A++ ++F+F AEV E IR QV++ +
Sbjct: 389 QLFYLQSRGINQADAQQMIIFAFAAEVTEAIHNDVIRKQVLARI 432
>gi|269926802|ref|YP_003323425.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
gi|269790462|gb|ACZ42603.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
Length = 434
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 179/415 (43%), Gaps = 54/415 (13%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSL-D 121
S SL +P + LR + + +TP P+ +DE +R TD + Q P+ SS L +
Sbjct: 22 SESLNEPEWFRDLRLRAWEAFENTPMPTLQDEEWRRTDIRALNFDNFQVPLEASSSYLPE 81
Query: 122 VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGS---------------LLGVSDGIMK 166
S D + +DG + S L+ S GV + L V
Sbjct: 82 SSEDHRSGFAQFVDGRLVQSWLDDSLAAKGVIMTDLSTAAREYPDLLRQYLFSVVPDAYS 141
Query: 167 RVSDFISEFQCGDLFWSING------------MGAPDLGV----IYVPAEGNDCY----- 205
+ + + F G + N + +P L V + V G+
Sbjct: 142 KFAALANAFGNGVFVYVPNNVQVDLPVQISFTLSSPGLAVFPRSLVVAERGSSLAIIERY 201
Query: 206 ----WAN-------SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
W + + EVV G+G ++R+ +Q N H + + + +
Sbjct: 202 YTEDWKDEPESLSVAGAEVVAGEGSQLRYVSVQELGRNFWHFLVQRHKVLKDAQENSLNI 261
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ--LHKCI 312
GGKLS+ NV +EL + Q D H+ L DH + C L+K +
Sbjct: 262 GLGGKLSKSNVETIMAEKGGVSELLGIYFGDDSQFFDYHT--LQDHAQPNCTSDLLYKGV 319
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ + +AVF G +KV AQ+TDA Q R+LLL A + PNL+I A+DV+CSHGA+
Sbjct: 320 LKDT-ARAVFSGLIKVRPGAQKTDAYQTNRNLLLSDSARADSIPNLEIEANDVRCSHGAS 378
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
+ +++ QLFY ARG+ + A + +V F ++ R P +R+++++ + M
Sbjct: 379 VGPIDKEQLFYLMARGLSRKAAERMIVDGFFEPIVNRIPLEGVRDRLLAAIDKKM 433
>gi|29654655|ref|NP_820347.1| FeS assembly protein SufD [Coxiella burnetii RSA 493]
gi|161831539|ref|YP_001597200.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
gi|29541923|gb|AAO90861.1| SufD [Coxiella burnetii RSA 493]
gi|161763406|gb|ABX79048.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
Length = 426
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 178/425 (41%), Gaps = 66/425 (15%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
E +L + + Q P QK +T L +P RK E +++T+ + PI
Sbjct: 6 ESALRALQNQNSQWHPWQK---EQLKTFLLHGFPHRKVENWKYTN--------VTPIAEQ 54
Query: 117 SSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
+ S +TD LV I+G +LS LP V + SL + I +
Sbjct: 55 AFSFGENTDTDIADFILPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNEL 114
Query: 169 S---DFISEFQCGD--LFWSINGMGAPD-------------------------------- 191
+ D+ + F + LF + P
Sbjct: 115 AIKKDYQTAFSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKPTASLTMSQIRHVILLE 174
Query: 192 ---LGVIYVPAEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
VI+ +G + Y+ N V ++ + + LQ + A HI T++ Q
Sbjct: 175 ENAKAVIFEEYQGTNGVAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRH 234
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC- 305
S ++ G +LSR +++ +L F+ L D H+R+ DH +C
Sbjct: 235 SQVTSGHIAMGSELSRDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTRI--DHRVSHCT 292
Query: 306 -RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
+Q +K ++A +AVF+G + V A+QT A Q ++L+L A V+ KP L+I DD
Sbjct: 293 SQQNYKGVLADK-SRAVFNGKIIVQPNAKQTSAHQTNKNLILSSDAEVDTKPELEIYNDD 351
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
VKC+HGA + L E +FY Q+RGI+ A L +F EV+E P I +++ V
Sbjct: 352 VKCTHGATVGQLNEEAIFYLQSRGINRGAAEHLLTCAFANEVVEMLPNKVIADRIQQLVT 411
Query: 425 NLMGT 429
+ + T
Sbjct: 412 DRLAT 416
>gi|11342548|emb|CAC17127.1| SufD protein [Erwinia chrysanthemi]
Length = 430
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 6/230 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
Y EG +++ + L + G+ + H L ++ ++ H +R A+
Sbjct: 193 YASLEGA-AHFSGARLTIDAGENSRTEHYKLGFEAADSYHFAHNDLRLARAAQLHSHSFL 251
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIV 313
G L+RH+ Q G ++S + ++ D +R L+H +G+ RQLHK IV
Sbjct: 252 LGAGLTRHHTSAQMNGEGVTLSMNSLMVPTGNEVCD--TRTYLEHNQGFGESRQLHKAIV 309
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ VF+G +KV A TD +LLL A V+ KP L+I ADDVKCSHGA +
Sbjct: 310 -RDRARGVFNGLIKVAPGALPTDGKMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATV 368
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A++ ++F+F AE+ E ++R+ V+ V
Sbjct: 369 GRIDEEQLFYLRSRGIGEQAAQQMIIFAFAAELTEAIRDDALRDAVLERV 418
>gi|365875814|ref|ZP_09415339.1| FeS assembly protein SufD [Elizabethkingia anophelis Ag1]
gi|442587591|ref|ZP_21006407.1| FeS assembly protein SufD [Elizabethkingia anophelis R26]
gi|365756326|gb|EHM98240.1| FeS assembly protein SufD [Elizabethkingia anophelis Ag1]
gi|442562762|gb|ELR79981.1| FeS assembly protein SufD [Elizabethkingia anophelis R26]
Length = 435
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 125/243 (51%), Gaps = 6/243 (2%)
Query: 171 FISEFQCGDLFWSINGMGAPDLG----VIYVPAEGNDCY-WANSVLEVVIGKGGKVRHSY 225
++S+ Q + F++ + + G VI +D + + NSV E+ + K
Sbjct: 169 YLSQNQEENTFYNTRNLLIAEAGSKVEVIESHHNFDDTFTFTNSVTEIFVYPNAKADWHK 228
Query: 226 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 285
LQN S + + T RQE S + S GGKL R+N+ G + + ++ ++
Sbjct: 229 LQNDSDTSYLVDNTYARQEKDSLATVNTFSFGGKLVRNNLDFIHNGENINSFMNGITIIN 288
Query: 286 SDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLL 345
+DQ D H+ + + P Q +K + VF+G V V++ AQ+T+A Q ++L
Sbjct: 289 NDQLVDHHTAVHHNFPNCESYQNYKGVFG-GKSHGVFNGKVFVDKIAQKTNAYQQNNNVL 347
Query: 346 LEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAE 405
L AT++ KP L+I ADDVKCSHG + L++ LFY +ARGI AR L+++F +
Sbjct: 348 LSEGATIDTKPQLEIFADDVKCSHGCTVGQLDDEALFYLRARGISKNEARALLLYAFAHD 407
Query: 406 VIE 408
++
Sbjct: 408 AMQ 410
>gi|359786382|ref|ZP_09289517.1| Fe-S cluster assembly protein SufD [Halomonas sp. GFAJ-1]
gi|359296232|gb|EHK60485.1| Fe-S cluster assembly protein SufD [Halomonas sp. GFAJ-1]
Length = 446
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 155/382 (40%), Gaps = 53/382 (13%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALN 144
+P+R+DE +++TD I S + P L +DG ++ +
Sbjct: 41 FPTRRDEEWKYTDVRTIAQGNFALADNAEFSQATAATLTLPLDAYRLTFVDGVFSSALSD 100
Query: 145 LSNLPDGVYV------------------GSLLGV-------------SDGIMKRVS---- 169
L LP V V G L GV +G + R++
Sbjct: 101 LEALPSSVQVMPLSKALSENHEAVGGPLGRLTGVDFSAFAALNTAFTEEGAVVRIAPGTV 160
Query: 170 -------DFISE----FQCGDLFWSINGMGAPDLGVI-YVPAEGNDCYWANSVLEVVIGK 217
F+S C + G + +I + E + + N V E+++ +
Sbjct: 161 VEKPILLQFLSRAGSPVMCHPRIL-VEAAGRSEATIIEHYAGEADAANFTNVVAELMLDR 219
Query: 218 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 277
G + H LQ L H+ V Q + Y ++ GG L R+++ G ET
Sbjct: 220 GAILNHYKLQEAPLGDMHVASIHVEQNRDTRYSSYNLNLGGALVRNDLISDLNGQGAETN 279
Query: 278 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDA 337
Q D H+++ + P + + +K I+ VF+G V V R +Q+ +
Sbjct: 280 FYGLFFGQGRQHVDNHTKVNHNAPLTFSNENYKGIL-DDRAHGVFNGKVYVKRDSQKIEG 338
Query: 338 GQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKA 397
Q ++LLL RA ++ KP L+I ADDVKCSHG L+E ++ + RGID TAR
Sbjct: 339 FQSNQNLLLSDRARIDAKPELEIYADDVKCSHGTTTGQLDEEAIYALRTRGIDEATARGL 398
Query: 398 LVFSFGAEVIERFPYPSIRNQV 419
L +F EV+E+ I +V
Sbjct: 399 LTLAFAGEVLEQVALDVIAERV 420
>gi|374386568|ref|ZP_09644067.1| FeS assembly protein SufD [Odoribacter laneus YIT 12061]
gi|373223741|gb|EHP46086.1| FeS assembly protein SufD [Odoribacter laneus YIT 12061]
Length = 453
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 161/338 (47%), Gaps = 17/338 (5%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNL 148
W +++E + +I S Q + P L + Q+ + DG + +LN +
Sbjct: 102 WYFKENEKADVPEGVVICSFQEASLKYPE--LFAAHYNQYAPAAVKDGLV---SLNTAFA 156
Query: 149 PDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSINGM-----GAPDLGVIYVPAEGN 202
DGV+V GV+ +KR ++ + DL M GA ++
Sbjct: 157 QDGVFVYIPEGVN---LKRPLQIVNLLRAKADLMAYQRNMIILEKGAEATLLVCDHTLSE 213
Query: 203 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
+ + N+V E+ +G+G + + +QNQ L A+ I V ++ + +E V+ G + R
Sbjct: 214 NYFLMNNVTEIYVGEGAHLDYYQVQNQHLGASQINSLFVSEQRNAVFESNMVTLYGGMIR 273
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-RQLHKCIVAHSLGQAV 321
+N +V E L ++L D++Q + + +DH +C H V A
Sbjct: 274 NNQYVALNEEGGECHLYGIYIL--DKSQKVDNFSYIDHIAPHCTSNEHFKGVLDDSSLAN 331
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+T+A Q +LLL A VN KP L I ADDVKCSHGA + ++E +
Sbjct: 332 FSGCIRVEPDAQKTEAYQANNNLLLTDSARVNAKPQLIIDADDVKCSHGATVGQIDEEAM 391
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
FY ++RGI L AR ++F F ++++R +R ++
Sbjct: 392 FYLRSRGISLAEARMMMMFGFAHDIVQRVKLEPLRVKI 429
>gi|212212267|ref|YP_002303203.1| SufD [Coxiella burnetii CbuG_Q212]
gi|212010677|gb|ACJ18058.1| SufD [Coxiella burnetii CbuG_Q212]
Length = 426
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 178/425 (41%), Gaps = 66/425 (15%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
E +L + + Q P QK +T L +P RK E +++T+ + PI
Sbjct: 6 ESALRALQNQNSQWHPWQK---EQLKTFLLHGFPHRKVENWKYTN--------VTPIAEQ 54
Query: 117 SSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
+ S +TD LV I+G +LS LP V + SL + I +
Sbjct: 55 AFSFGENTDTDIADFILPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNEL 114
Query: 169 S---DFISEFQCGD--LFWSINGMGAPD-------------------------------- 191
+ D+ + F + LF + P
Sbjct: 115 AIKKDYQTAFSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKPTASLTMSQIRHVILLE 174
Query: 192 ---LGVIYVPAEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
VI+ +G + Y+ N V ++ + + LQ + A HI T++ Q
Sbjct: 175 ENAKAVIFEEYQGTNGVAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRH 234
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC- 305
S ++ G +LSR +++ +L F+ L D H+R+ DH +C
Sbjct: 235 SQVTSGHIAMGSELSRDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTRI--DHRVSHCT 292
Query: 306 -RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
+Q +K ++A +AVF+G + V A+QT A Q ++L+L A V+ KP L+I DD
Sbjct: 293 SQQNYKGVLADK-SRAVFNGKIIVQPNAKQTSAHQTNKNLILSSDAEVDTKPELEIYNDD 351
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
VKC+HGA + L E +FY Q+RGI+ A L +F EV+E P I +++ V
Sbjct: 352 VKCTHGATVGQLNEEAIFYLQSRGINRGAAEHFLTCAFANEVVEMLPNKVIADRIQQLVT 411
Query: 425 NLMGT 429
+ + T
Sbjct: 412 DRLAT 416
>gi|407684525|ref|YP_006799699.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'English Channel 673']
gi|407246136|gb|AFT75322.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'English Channel 673']
Length = 418
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 172/387 (44%), Gaps = 46/387 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSL 131
L +R + + L + WP+R++E +RFT T + K Q + S + + L
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKRDAKQAVQADSLPVPAIDNLNAIDL 77
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSD-------------FISEFQCG 178
V +DG + + +N ++P G+ + SL + +S +++ C
Sbjct: 78 VFVDGVLV-TQVNTLDVPAGMSITSLNSDDAATQQAISSVYGQVKPTRHMFGLVNDALCQ 136
Query: 179 -DLFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGK---VRHSYLQNQSLNAA 234
+F ++ D V V + A++ + V +G+G + + +SL A
Sbjct: 137 HGIFINVEAGAKIDTPVRIVNMASQNVD-AHTRVVVKVGEGASATVIEQGFGDTESLTTA 195
Query: 235 HIKWT-----------------AVRQETASGYEL--------VEVSTGGKLSRHNVHVQQ 269
++ +Q S ++L V G +LSR +V +
Sbjct: 196 FAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNSTMVGYGSELSRLDVDIHH 255
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
G + ++++ +LL + DLHS + P G + + IV +AVF+G + ++
Sbjct: 256 AGEFADAKMNAIYLLAEGELFDLHSTIEHAMPNGTTEENARGIVGDK-ARAVFNGRIHIH 314
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+T A R+LLL R +N KP L+I ADDVKC+HGA ++++EE L+Y RG+
Sbjct: 315 RDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVKCAHGATVAEIEEEALYYMLTRGV 374
Query: 390 DLETARKALVFSFGAEVIERFPYPSIR 416
A L F F E+I P ++R
Sbjct: 375 SRSKALVMLNFGFIQELINDVPNAAVR 401
>gi|448746842|ref|ZP_21728507.1| SUF system FeS cluster assembly, SufD [Halomonas titanicae BH1]
gi|445565770|gb|ELY21879.1| SUF system FeS cluster assembly, SufD [Halomonas titanicae BH1]
Length = 446
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 178/417 (42%), Gaps = 60/417 (14%)
Query: 58 DSLPSSSSSL-PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK--------SS 108
D+L + SS+ +P + R + + + +P+R+DE +++TD I ++
Sbjct: 9 DTLKARSSNYTAEPTWIAARRQAGAARFEALGFPTRRDEEWKYTDVRSIAQGNFAIADNA 68
Query: 109 QIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV-------------- 154
+ P T +++L + DA L +DG ++ +L +LP V V
Sbjct: 69 EFSPAT--AAALTLPIDAY--RLTFVDGVFSSALSDLDSLPSSVQVLPLSKALAENHEAV 124
Query: 155 ----GSLLGV-------------SDGIMKRVS-----------DFISE----FQCGDLFW 182
G L+GV +G + R++ F+S C
Sbjct: 125 GGPLGRLIGVDFSPFAALNTAFMEEGAVVRIAPGTVVEKPILLQFLSRAGQPVMCHPRVL 184
Query: 183 SINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 242
G + + + E + N V E+++ +G + H LQ L H+ V
Sbjct: 185 VEAGGRSEATLIEHYTGESEAANFTNVVGELMLDRGAILAHYKLQEAPLGDLHVASIHVE 244
Query: 243 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 302
Q + Y +S GG L R+++ G ET Q D H+++ + P
Sbjct: 245 QGRDTRYTSYNLSLGGALVRNDLISDLNGQGAETNFLGLFFGQGRQHVDNHTKVNHNAPL 304
Query: 303 GYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA 362
+ + +K I+ VF+G V V R +Q+ + Q ++LLL RA ++ KP L+I A
Sbjct: 305 TFSNENYKGIL-DDRAHGVFNGKVYVKRDSQKIEGFQSNQNLLLSDRAHIDAKPELEIYA 363
Query: 363 DDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
DDVKCSHG L+E ++ + RGID TAR L +F EV+++ +I +V
Sbjct: 364 DDVKCSHGTTTGQLDEEAIYALRTRGIDEATARGLLTLAFAGEVLDKVTLDAIAERV 420
>gi|294083586|ref|YP_003550343.1| Fe-S center production/stability protein SufD [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663158|gb|ADE38259.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 421
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 177/391 (45%), Gaps = 53/391 (13%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT------RPSSS 119
+L Q L +R + ++ WP E +RFT + + + P R +S+
Sbjct: 9 NLDQMTGLGGVRSDALARWQASGWPDANVEAWRFTRLGAVIARDLVPAIQGGETGRETSA 68
Query: 120 LDVSTDAQFPSLVL--IDGFIQNSALNLSNLPDG-VYVGSLLGVSDGIMKRVSDFI-SEF 175
A+ + V+ +G I ++L+ LPDG V SL D I V+ ++
Sbjct: 69 TIAKIAAEMQAHVIRFYNGMIDVASLD--GLPDGMVATHSLTSDFDAIAAEVAGLAPNDH 126
Query: 176 QCGDLFWSINGMG---APDLGV-----IYVPAEGN-DCYWANSVLEVVIGKGG------- 219
G+L + G + GV + + EG+ + A+ VL V +G G
Sbjct: 127 PVGNLSLAAMSSGLRLSVAAGVQITQPVLLAFEGDGENVSAHPVLMVDVGMGSAAVIAEW 186
Query: 220 ------------------KVRHSY--LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
K R Y +Q + ++ H+ T + S + +S GG+
Sbjct: 187 HQSQLGLNAPLCALRLADKARLDYAKVQAEGADSVHLAATGIALGEESVFAGFSISAGGQ 246
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSL 317
L+R HV G E LS+ +L Q D+ + +DH G+C Q+ + ++ +
Sbjct: 247 LARLETHVTLTGETAECGLSAIYLGRDKQHHDITT--YMDHAVGHCHSNQIIRGVLDDA- 303
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
+ VF G V V AQ+TD Q++R+LLL +A + KP L+I ADDV C+HGA + +L+
Sbjct: 304 SRGVFQGKVHVAPDAQKTDGQQMSRALLLSRKAEADAKPELEIYADDVICAHGATVGELD 363
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIE 408
E+QLFY +RGI AR L+ +F + I+
Sbjct: 364 ETQLFYLTSRGIPKAKARAMLIGAFLDDAID 394
>gi|284006308|emb|CBA71544.1| cysteine desulfurase activator complex subunit [Arsenophonus
nasoniae]
Length = 465
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKC 311
+ G L RH+ V+ G + L+S LL+ + + SR L+H + +C RQLHK
Sbjct: 290 IFIGSALLRHHTSVKLNGAGSRLALNS--LLLPQNREIVDSRTYLEHNQPFCKSRQLHKT 347
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
I A +AVF+G +KV A +TD +LLL A ++ KP L+I ADDVKCSHGA
Sbjct: 348 I-AQDESKAVFNGMIKVAPPALKTDGQMTNNNLLLGKYAEIDTKPQLEIYADDVKCSHGA 406
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVV 420
+ +++ QLFY ++RGI L A+ ++ +F AEVIE I N+V+
Sbjct: 407 TVGRIDDEQLFYLRSRGIHLNDAKHMIMVAFAAEVIEAIDNEEISNKVM 455
>gi|121997338|ref|YP_001002125.1| FeS assembly protein SufD [Halorhodospira halophila SL1]
gi|121588743|gb|ABM61323.1| Iron-regulated ABC transporter permease protein SufD
[Halorhodospira halophila SL1]
Length = 445
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 171/398 (42%), Gaps = 64/398 (16%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF- 128
P L + R ++ T + +P+R+ E ++ D + + S P + + ++D +
Sbjct: 23 PEWLAERRRAAMATFDAHGFPTRRWEAWKHIDLTPVLRSDFHP-PQTAGAVDDGLAGRVD 81
Query: 129 --------PSLVLIDGFIQNSALNLSNLPDGVYV-------------------------- 154
P LV IDG++ S + + LP G+ V
Sbjct: 82 QLLPRSDGPRLVFIDGYLDASRSDYAELPAGLSVQPLSQALADDVAWLQQHLAAHADPAN 141
Query: 155 -------------GSLLGVSDGIMKR----VSDFISEFQCGDLFWS---INGMGAPDLGV 194
G + V+ G M + + S G + ++G A L V
Sbjct: 142 SPFIALNTALMDEGVAIHVARGAMIEAPLLIVCYTSAACAGHAVYPRVIVHGEEASHLRV 201
Query: 195 I-YVPAEGNDCYWANSVLEVVIGKGGKV---RHSYLQNQSLNAAHIKWTAVRQETASGYE 250
+ Y + Y + V E+V G +V R S + + TA R +
Sbjct: 202 VEYHSGDPEAAYLSCPVTELVADAGAQVDLTRISEEGDAGCQLGAVSGTAARDARVGAHS 261
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 310
V GG R ++ G + E +L+ HL + D H+ + D RQ+ K
Sbjct: 262 FV---WGGDKVRVDIEATVQGDNGEGDLTGVHLSDGQRFVDHHTWVHHDAEHTRSRQVFK 318
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
++ ++VFDG +KV+ AQ+TDA Q R+LLL PRA + P L+I ADDV+C+HG
Sbjct: 319 GVL-DGRSESVFDGLIKVHPGAQKTDAEQENRNLLLSPRAFAHSNPRLEIFADDVRCTHG 377
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
+ + +L+E LFY +ARGID A+ L ++F AEV+E
Sbjct: 378 STVGELDEQALFYMRARGIDPLVAKSLLTYAFVAEVLE 415
>gi|354597121|ref|ZP_09015138.1| FeS assembly protein SufD [Brenneria sp. EniD312]
gi|353675056|gb|EHD21089.1| FeS assembly protein SufD [Brenneria sp. EniD312]
Length = 441
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVA 314
G L+RH+ Q G ++S + V + D +R L+H GY RQLHK IV
Sbjct: 260 GAGLTRHHTSAQMNGEGANLAINSLIMPVGSEVCD--TRTYLEHNDGYGESRQLHKTIV- 316
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+ +AVF+G +KV A +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 317 NDRAKAVFNGMIKVAPRALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIG 376
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E QLFY ++RGI + A + ++F+F AE+ E S+R+ ++ +
Sbjct: 377 RMDEEQLFYLRSRGITRQDAHQMIIFAFAAELTEAIADESLRDVILKRI 425
>gi|218463659|ref|ZP_03503750.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli Kim 5]
Length = 281
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 1/209 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + + + ++ IGKG ++ LQ Q + H+ V + L ++ GGKL
Sbjct: 53 GDAAFVSHISDITIGKGTELTWIILQQQGADDTHLGQIRVDLGADAKLRLFVINAGGKLV 112
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +H++ G + L +LL +D D+ L D P ++ + +V + V
Sbjct: 113 RQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGV 171
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L
Sbjct: 172 FQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHL 231
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERF 410
+Y ARGI + AR LV +F AE++E
Sbjct: 232 YYMMARGIPEKKARAMLVNAFVAEIVEEL 260
>gi|407688453|ref|YP_006803626.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291833|gb|AFT96145.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 418
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 176/390 (45%), Gaps = 52/390 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + + L + WP+R++E +RFT + ++ + +Q + P ++D +
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKREAKQAVQADSLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSD-------------FISEF 175
LV +DG + + +N ++P G+ + SL + +S +++
Sbjct: 75 VDLVFVDGVLV-TQVNTLDVPAGMSITSLNNDDTATQQAISSVYGQVKPTRHMFGLVNDA 133
Query: 176 QCG-DLFWSINGMGAPD--LGVIYVPAEGNDCYWANSVLEVVIGKGGKV-RHSYLQNQSL 231
C +F ++ D + ++ + ++ D + V++V G V + +SL
Sbjct: 134 LCQHGIFINVEAGAKIDTPVRIVNMASQNVDAH-TRVVVKVAEGASATVIEQGFGDTESL 192
Query: 232 NAAHIKWT-----------------AVRQETASGYEL--------VEVSTGGKLSRHNVH 266
A ++ +Q S ++L V G +LSR +V
Sbjct: 193 TTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNSTMVGYGSELSRLDVD 252
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 326
+ G ++++ +LL + DLHS + P G + + IV +AVF+G +
Sbjct: 253 IHHAGEFANAKMNAIYLLAEGELFDLHSTIEHAMPNGTTEENARGIVGDK-ARAVFNGRI 311
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
++R AQ+T A R+LLL R +N KP L+I ADDVKC+HGA ++++EE L+Y
Sbjct: 312 HIHRDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVKCAHGATVAEIEEEALYYMLT 371
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIR 416
RG+ A L F F E+I P ++R
Sbjct: 372 RGVSRSKALVMLNFGFIQELINDVPNAAVR 401
>gi|123965315|ref|YP_001010396.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9515]
gi|123199681|gb|ABM71289.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9515]
Length = 405
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 1/176 (0%)
Query: 241 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 300
V Q+ S Y L + +R +++ QL + +T + + ++ ++ + +
Sbjct: 220 VIQKAKSEYSLGSLHFKFNYARFEININQLDGNAKTNIKGIQITKNNDQIATYTNMNFNG 279
Query: 301 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQI 360
P G+ Q++K + A AVF+G++ V + AQ+TDA QL+R+LLL A ++ KP L+I
Sbjct: 280 PNGFLDQINKSL-ADDKSHAVFEGSIIVPKIAQKTDASQLSRNLLLSRFAKIDTKPQLEI 338
Query: 361 IADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
IADDVKC HGA IS L E ++FY ++RG+ L A K + S+ E+I P R
Sbjct: 339 IADDVKCKHGATISQLNEEEIFYMRSRGLTLAEASKLQLSSYIQEIISSIPISKDR 394
>gi|261855794|ref|YP_003263077.1| FeS assembly protein SufD [Halothiobacillus neapolitanus c2]
gi|261836263|gb|ACX96030.1| FeS assembly protein SufD [Halothiobacillus neapolitanus c2]
Length = 426
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
+W NSVL + ++ H L + V + Y+ + + GG+L R
Sbjct: 198 VFWRNSVLVAELAANSQLTHLSLGLDGDARLLTDRSFVTLARDARYQSINIQLGGQLVRR 257
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 323
++ V +L + + Q D H+RL+ + ++ I+A G+ +F
Sbjct: 258 DIDVNITETGAHCDLIGLMMPRAKQVLDTHTRLIHGAAHTTSNEQYQ-IIADESGRGIFK 316
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V + AQ+ +A Q +R+LLL A ++ KP L+I ADDVKCSHGA I L++ L+Y
Sbjct: 317 GRILVAQDAQKIEAFQNSRNLLLSDSAEIDTKPELEIYADDVKCSHGATIGRLDDEALYY 376
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSI 415
++RGI E ARK L+ F E++++ P P +
Sbjct: 377 LKSRGISSENARKLLITGFAQEIVDQLPTPEL 408
>gi|88811717|ref|ZP_01126971.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
gi|88791108|gb|EAR22221.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
Length = 443
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 5/201 (2%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET--ASGYELVEVSTGGKLSRHNVHV 267
V E+V +G V + +Q + +AH+ AV ET + + ++ G KL+R +++
Sbjct: 217 VTEIVARQGANVDYYKVQEEGAGSAHLG--AVHAETFRDATVHIHSLACGAKLARTDIYA 274
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
+GP + L+ +L Q D H+ + G RQ+ K ++ + VFDG VK
Sbjct: 275 NLIGPGADVTLNGLYLTTGRQYCDHHTWVNHKAEHGTSRQVFKGVL-QGRSETVFDGLVK 333
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V AQ+ DA Q R+LLL A + P L+I ADDVKCSHG+ + L++ LFY R
Sbjct: 334 VFERAQKIDAQQQNRNLLLGKLALAHSNPRLEIHADDVKCSHGSTVGKLDDEALFYLNTR 393
Query: 388 GIDLETARKALVFSFGAEVIE 408
GI L+ A+ L F+F AE+++
Sbjct: 394 GIGLDEAQGLLTFAFAAEMLK 414
>gi|390449443|ref|ZP_10235049.1| hypothetical protein A33O_07860 [Nitratireductor aquibiodomus RA22]
gi|389664136|gb|EIM75644.1| hypothetical protein A33O_07860 [Nitratireductor aquibiodomus RA22]
Length = 423
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 176/402 (43%), Gaps = 50/402 (12%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD------------- 101
+L + S S LP + RD + + LL P+R+ E + +TD
Sbjct: 15 ALVNGYSSRFSDLPGDADVTVRRDEALE-LLKQGLPTRRVEAWHYTDLRRLLSVVPDFKP 73
Query: 102 -------TSMIKSSQIQPITRPSS--------SLDVST------DAQFPS--LVLIDGFI 138
+I+++ + P+ ++ L ++T + P+ L D F
Sbjct: 74 VANAEAVAPLIENALVLPVLNGTAHGREAGPEGLTIATLADKLQEGALPAEWLTASDRFD 133
Query: 139 QNSALNLSNLPDGVYVGSLLGVSDGI-MKRVSDFISEFQCGDLF--WSINGMGAPDLGVI 195
A+N + + DG + L +++G + R + S G + + +N +I
Sbjct: 134 AVGAINAAFVSDGYW----LDIAEGAELDRPIELQSIHAGGQVHGRFVVNAAAGSKATII 189
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
D + A+S+ + + G V LQ Q +AA++ S L ++
Sbjct: 190 ERQTGAGDAF-ASSITHLDVADGANVLWILLQEQPDDAAYLGQFTASLGKNSSLTLFIMN 248
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 313
GGKL R V V G ++ L +LL + D+ ++LDH P + + +V
Sbjct: 249 GGGKLVRQEVKVVARGEGSDFRLRGVNLLGGETHCDV--TMVLDHLAPDTVSTETFRNVV 306
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
VF G ++V + AQ+TDA +LLL + KP L+I ADDV C HGA +
Sbjct: 307 TGK-ANGVFQGQIRVAKVAQKTDAKMACNTLLLTDEGGFSSKPELEIFADDVACGHGATV 365
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
+D+E+ LFY ARGID +TAR LV +F AEVIE ++
Sbjct: 366 TDIEKEHLFYLMARGIDEKTARGLLVKAFVAEVIEELEDETV 407
>gi|423315855|ref|ZP_17293760.1| FeS assembly protein SufD [Bergeyella zoohelcum ATCC 43767]
gi|405585571|gb|EKB59395.1| FeS assembly protein SufD [Bergeyella zoohelcum ATCC 43767]
Length = 426
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 177/405 (43%), Gaps = 54/405 (13%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT---------------DTSMIKSSQIQP 112
Q LQ + ++ + LS +P++KDE +++T T I Q+
Sbjct: 9 KQKNTLQGEKHAALEKFLSLGFPTKKDEEYKYTHLKEVTEKDYNFSPKKTHNITKEQLNQ 68
Query: 113 ITRPSSSLD---------------VSTD-AQFPSLVLIDGF-------------IQNSAL 143
+ + D +S + A+F SL + I N L
Sbjct: 69 LHLGEENFDWLVFVNGELHKELSKISIENAEFLSLEYVQNHEQYQPMVKQYLDTIANKDL 128
Query: 144 NLSNLPDGVY-VGSLLGVSDG--IMKRVSDF-ISEFQCGDLFWSINGMGAPDLGVIYVPA 199
+ L +Y G L + I K + F +S+ Q + +++ + + G
Sbjct: 129 AFTQLNTALYSFGFFLHIPKNTVIEKPIHVFYLSQNQEENTCYNVRNLLIAEEGAKVEII 188
Query: 200 EGNDCY-----WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
E + + + N+V E+ + KV LQN + ++ + T +QE S +
Sbjct: 189 ESHHNFDTTYTFTNAVTEIFVASNAKVDWHKLQNDNASSYLVDHTFAKQERDSLATVNTF 248
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
S GGKL R+N+ G + + ++ ++ +Q D H+ + + P Q +K I
Sbjct: 249 SFGGKLVRNNLDFIHNGENINSFMNGITIIGGEQLVDHHTAVHHNQPNCESYQNYKGIFK 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
VF+G V V++ AQ+T+A Q ++LL AT++ KP L+I ADDVKCSHG +
Sbjct: 309 DK-AHGVFNGKVFVDKIAQKTNAYQQNNNVLLSEGATIDTKPQLEIFADDVKCSHGCTVG 367
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
L E LFY +ARGI + A+ L+++F + ++ ++ ++
Sbjct: 368 QLNEDALFYLRARGISKKEAQALLLYAFANDAMQNIDIEPLKEKI 412
>gi|374314126|ref|YP_005060555.1| FeS assembly protein SufD [Serratia symbiotica str. 'Cinara cedri']
gi|363988352|gb|AEW44543.1| FeS assembly protein SufD [Serratia symbiotica str. 'Cinara cedri']
Length = 429
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 5/167 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVA 314
G +L+RHN+ Q +++S L + + D+ R ++H +GYC QLHK IV+
Sbjct: 255 GTRLTRHNISSQFNSTGANLKINSLVLPIGKEVCDI--RTYIEHNQGYCNSDQLHKTIVS 312
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+AVF G + V + + +T+ R+LLL A VN KP L+I ADDVKCSHGA +
Sbjct: 313 DQ-AKAVFHGIINVAKKSIKTNGNMTNRNLLLGKDAEVNTKPELEIYADDVKCSHGATVG 371
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
++ +QLFY Q+RGI+ + A++ ++ +F AE+ ++R V++
Sbjct: 372 SIDVAQLFYMQSRGINKQDAQQMIIVAFSAELTANILNKTLRESVIN 418
>gi|255534221|ref|YP_003094592.1| Iron-sulfur cluster assembly protein SufD [Flavobacteriaceae
bacterium 3519-10]
gi|255340417|gb|ACU06530.1| Iron-sulfur cluster assembly protein SufD [Flavobacteriaceae
bacterium 3519-10]
Length = 436
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 1/201 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V E+ + K LQN S ++ I T +QE S + + GGKL R+N+
Sbjct: 211 NTVTEIFTYENAKADWHKLQNDSDHSYMIDHTFAKQERDSRTTVNTFTFGGKLVRNNLDF 270
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G + + ++ ++ +Q D H+ + P Q +K I VF+G V
Sbjct: 271 IHNGENINSYMNGITIIGKEQLVDHHTAVHHKTPHCESYQNYKGIYKDK-SHGVFNGKVF 329
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V++ AQ+T+A Q ++LL+ AT++ KP L+I ADDVKCSHG + L E LFY +AR
Sbjct: 330 VDKLAQKTNAYQQNNNILLDEGATIDTKPQLEIFADDVKCSHGCTVGQLNEDALFYLRAR 389
Query: 388 GIDLETARKALVFSFGAEVIE 408
GI + A+ L+F+F ++ I+
Sbjct: 390 GISKKEAQALLLFAFASDAIQ 410
>gi|365849700|ref|ZP_09390168.1| FeS assembly protein SufD [Yokenella regensburgei ATCC 43003]
gi|364568025|gb|EHM45670.1| FeS assembly protein SufD [Yokenella regensburgei ATCC 43003]
Length = 423
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 5/164 (3%)
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 319
RHN + G ++ ++S + V + D +R L+H +GYC RQLHK IV+ G+
Sbjct: 255 RHNTSTRLSGENSTLRVNSLAMPVKSEVCD--TRTWLEHGKGYCNSRQLHKTIVSDK-GR 311
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
AVF+G + V +A +TD +LLL A + KP L+I ADDVKCSHGA + +++
Sbjct: 312 AVFNGIINVAPHAIKTDGQMTNNNLLLGRLAEADSKPQLEIYADDVKCSHGATVGRIDDE 371
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
QLFY ++RGI + A++ ++++F AE+ E +++ QV+ +
Sbjct: 372 QLFYLRSRGIGQQAAQQMIIYAFAAELTEVIDDEALKQQVLGRI 415
>gi|78778458|ref|YP_396570.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9312]
gi|78711957|gb|ABB49134.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9312]
Length = 405
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 101/171 (59%), Gaps = 1/171 (0%)
Query: 241 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 300
V Q+ S Y L + +R +H++Q + +T + + +D+ H+++ +
Sbjct: 220 VIQQKNSKYNLGSLHFKFNYARFEIHIKQSAGNAKTNIKGMQVTKNDEQISTHTKIYFNG 279
Query: 301 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQI 360
P G+ Q++K + A A+F+G++ V + AQ+TDA QL+R+LLL A ++ KP L+I
Sbjct: 280 PNGFLDQINKSL-ADDKSHAIFEGSIIVPKIAQKTDASQLSRNLLLSNLAQIDTKPQLEI 338
Query: 361 IADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
IADDVKC HGA IS L E +LFY +ARGI L+ A K + S+ E+I P
Sbjct: 339 IADDVKCKHGATISQLNEEELFYMRARGITLKEASKLQLSSYFQEIISFIP 389
>gi|408369389|ref|ZP_11167170.1| FeS assembly protein SufD [Galbibacter sp. ck-I2-15]
gi|407745135|gb|EKF56701.1| FeS assembly protein SufD [Galbibacter sp. ck-I2-15]
Length = 438
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V E+ K G V + +QN +A+ I T + Q+ S + S GGKL+R+N+
Sbjct: 212 NAVTEIHTSKRGIVDYYKIQNDQESASLIDNTYISQQQNSHASVHTFSFGGKLTRNNLQF 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGN 325
G + L ++ Q D HS L+ H C Q +K I VF+G
Sbjct: 272 LHKGEYINSTLKGVTIIEDKQHVD-HS-TLVQHATPNCESHQDYKGIYG-DRSTGVFNGR 328
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V++ AQ+T+ Q ++L+ +AT+N KP L+I ADDVKCSHG I L+E ++Y +
Sbjct: 329 IIVDKEAQKTNGFQQNNNILVSDKATINAKPQLEIFADDVKCSHGCTIGQLDEEAMYYLR 388
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
RGI + AR L+++F V+E P ++ +V
Sbjct: 389 TRGIPKKEARALLMYAFANNVLESVKIPEVKARV 422
>gi|83644265|ref|YP_432700.1| FeS assembly protein SufD [Hahella chejuensis KCTC 2396]
gi|83632308|gb|ABC28275.1| FeS assembly protein SufD [Hahella chejuensis KCTC 2396]
Length = 439
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 104/195 (53%), Gaps = 1/195 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V EV + + H L + N H V Q+ S YE +TGG L R +++V
Sbjct: 212 NTVTEVFLAANSTMTHYALNCEGANQIHTGCVFVEQQGGSQYEQHAFATGGALKRRDINV 271
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
+ LG +L+ +L + D H+ + P + +K I+ + G+AVF+G V
Sbjct: 272 KLLGQLASCKLNGVYLAGGREHVDFHTTIEHVAPHCVSEETYKGII-NGKGKAVFNGRVH 330
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
++R AQQ+ A +LLL A VN KP L+I ADDVKC+HGA + L++ LFYF++R
Sbjct: 331 IHRDAQQSSAAMNNNNLLLTNTAEVNTKPELEIYADDVKCAHGATVGQLDDMALFYFRSR 390
Query: 388 GIDLETARKALVFSF 402
GI A + L +F
Sbjct: 391 GITRSDAHRMLSRAF 405
>gi|348028805|ref|YP_004871491.1| cysteine desulfurase activator SufB [Glaciecola nitratireducens
FR1064]
gi|347946148|gb|AEP29498.1| cysteine desulfurase activator SufB [Glaciecola nitratireducens
FR1064]
Length = 419
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 178/410 (43%), Gaps = 60/410 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L +R + L + WP + E +RFT + IK R + ++ + + P
Sbjct: 19 LAPMRQQALSKLQTQGWPHARSEEWRFTPLTSIKE-------RSVDASSIAGNYEVPEIE 71
Query: 131 ------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF------------- 171
LV +DG + + ++S LP G+ V +L + +++
Sbjct: 72 GLNAIDLVFVDGLLVTNLSDIS-LPSGLSVYALSDAPSAVQSKITSLFGHVKPARHVFGL 130
Query: 172 ISEFQCGD-LFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVR-------- 222
+++ C ++ ++ + D + V DC VL V +GK +++
Sbjct: 131 VNDALCQQGIYVEVDEDASIDTPLRIVNLATKDCDAHTRVL-VNLGKHSQLKVIEHGSGN 189
Query: 223 --------HSYLQNQSLNAAHIKWT----AVRQETASGYELVE--------VSTGGKLSR 262
Y+ + + H ++ A +Q S + L VS G +LSR
Sbjct: 190 VASFTTAFAEYVIGEKASLEHYRFALFTGAAKQVGGSHFSLQHSANLNSTLVSYGSELSR 249
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 322
+V + G ++++ +LL + DLHS + P G + + I+ +AVF
Sbjct: 250 LDVDIIHAGEHANAKMNAIYLLAEGEFFDLHSTIEHAMPNGTTEENARGIIGDR-ARAVF 308
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + ++R AQ+T A R+LLL RA +N KP L+I ADDVKC+HGA ++++EE L+
Sbjct: 309 SGRIHIHRDAQKTLAELNNRNLLLSRRAMINTKPELEIYADDVKCAHGATVAEIEEKALY 368
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTDV 432
Y +RGI A L F F E++ SIR ++ + + +V
Sbjct: 369 YLLSRGIKRSKALVMLNFGFIQELVNAIDDESIRTWLLPMLSERFASMEV 418
>gi|90417690|ref|ZP_01225602.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337362|gb|EAS51013.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 411
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 20/227 (8%)
Query: 185 NGMGAPDLGVIYVP-AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 243
N GAP GV ++ A+G + W +++ Q + ++AAH+ V
Sbjct: 183 NATGAPSTGVSHLTIADGAEVLW---IID--------------QAKGMSAAHLGQLNVTV 225
Query: 244 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 303
+ ++L +++GG L R+ VHV+ +G ++E + +LL Q D+ + L P
Sbjct: 226 GANAVFKLFVLNSGGALVRNEVHVESVGENSEIRIRGVNLLTEGQHVDVTTTLRHQVPNT 285
Query: 304 YCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
+ + +V + G VF G +KV + AQ+TDA +LLL + + KP L+I AD
Sbjct: 286 TATETFRNVV--TGGHGVFQGMIKVAKDAQKTDAKMACNTLLLSDQGDFSAKPELEIFAD 343
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
DV+C HGA ++ LFY +RGI + AR LV +F AEV+E
Sbjct: 344 DVQCGHGATAGEINADHLFYLMSRGIPEKPARALLVKAFVAEVVEEL 390
>gi|406672658|ref|ZP_11079883.1| FeS assembly protein SufD [Bergeyella zoohelcum CCUG 30536]
gi|405587202|gb|EKB60930.1| FeS assembly protein SufD [Bergeyella zoohelcum CCUG 30536]
Length = 426
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N+V E+ + KV LQN + + + T +QE S + S GGKL R+N+
Sbjct: 200 FTNAVTEIFVASNAKVDWHKLQNDNATSYLVDHTFAKQERDSLATVNTFSFGGKLVRNNL 259
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
G + + ++ ++ +Q D H+ + + P Q +K I VF+G
Sbjct: 260 DFIHNGENINSFMNGITIIGGEQLVDHHTAVHHNQPNCESYQNYKGIFKDK-AHGVFNGK 318
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V++ AQ+T+A Q ++LL AT++ KP L+I ADDVKCSHG + L E LFY +
Sbjct: 319 VFVDKIAQKTNAYQQNNNVLLSEGATIDTKPQLEIFADDVKCSHGCTVGQLNEDALFYLR 378
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
ARGI + A+ L+++F + ++ ++ ++
Sbjct: 379 ARGISKKEAQALLLYAFANDAMQNIDIEPLKEKI 412
>gi|399024661|ref|ZP_10726692.1| FeS assembly protein SufD [Chryseobacterium sp. CF314]
gi|398079958|gb|EJL70791.1| FeS assembly protein SufD [Chryseobacterium sp. CF314]
Length = 441
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 1/218 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
N + NSV E+ K LQN + + I T RQE S + S GGKL
Sbjct: 211 NSYVFTNSVTEIFTYPNAKADWHKLQNDNDTSYLIDNTFARQEKDSLTTVNTFSFGGKLV 270
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R+N+ G + + ++ ++ DQ D H+ + + P Q +K I V
Sbjct: 271 RNNLDFIHNGQNINSFMNGITIIGKDQLVDHHTAVHHNQPNCESYQNYKGIFKDK-AHGV 329
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G V V++ AQ+T+A Q ++LL AT++ KP L+I ADDVKCSHG + L E L
Sbjct: 330 FNGKVFVDKIAQKTNAYQQNNNVLLSEGATIDTKPQLEIFADDVKCSHGCTVGQLNEDAL 389
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
FY +ARGI + A+ L+++F + ++ ++ ++
Sbjct: 390 FYLRARGISKKEAQALLLYAFANDAMQNIDIEPLKEKI 427
>gi|86357865|ref|YP_469757.1| ABC transporter involved in Fe-S cluster assembly, permease
[Rhizobium etli CFN 42]
gi|86281967|gb|ABC91030.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CFN 42]
Length = 424
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 165/381 (43%), Gaps = 37/381 (9%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVS 123
LP + LRD L P+R+ E + +TD ++++ IQ S L+
Sbjct: 25 GDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDFKNLLRGLPIQAGDAGSDPLEPL 84
Query: 124 TDAQFPSLVLIDGFIQNSA----LNLS----NLPDGVYVGSL--LGVSDGIMKRVSDFIS 173
A L +I G A L +S +L DG G L LG D + + F+
Sbjct: 85 V-AGSSVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAGGLDALGSDDAVGRINGSFVR 143
Query: 174 EFQCGDL-------------FWSINGMGAPDLGVIYVP-----------AEGNDCYWANS 209
+ D+ F G L V + A D + +
Sbjct: 144 DGYVVDVPDDTELEDPLEIQFIHAGGQTHTRLPVSFGAGVKATVIERHRAVTGDAAFVSH 203
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
+ ++ +GKG ++ LQ Q + H+ V T + L ++ GGKL R +H++
Sbjct: 204 ISDITVGKGTELTWIILQQQGADDTHLGQIRVDLGTDAKLRLFVINAGGKLVRQELHIKV 263
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
G + L +LL ++ D+ L D P ++ + +V + VF G ++V
Sbjct: 264 TGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGVFQGMIRVA 322
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L+Y ARGI
Sbjct: 323 PDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHLYYMMARGI 382
Query: 390 DLETARKALVFSFGAEVIERF 410
AR LV +F +E++E
Sbjct: 383 PENKARAMLVNAFVSEIVEEL 403
>gi|330040358|ref|XP_003239873.1| Fe-S cluster assembly protein SufD [Cryptomonas paramecium]
gi|327206798|gb|AEA38975.1| Fe-S cluster assembly protein SufD [Cryptomonas paramecium]
Length = 476
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 179/384 (46%), Gaps = 62/384 (16%)
Query: 84 LLSTPWPSRKDEPFRFT------DTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGF 137
L +TP+P +++E ++F ++ SQ + P D + + ++GF
Sbjct: 91 LKTTPFPFQREESYKFVPLDRLFGMNLFTDSQKNTVHSPK----FFADKEQIEIHFLNGF 146
Query: 138 -IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ---CGDLFWSINGMGAPDLG 193
++N + +Y+GS + K + D ++ + G F ++N +
Sbjct: 147 CLENFSSTNYQSSKHLYLGSFEALPSEKKKYLLDISNQGESSVTGGFFSALNTACLSQIS 206
Query: 194 VIYVPAEGNDC----------------YWANSVLEVVIGKGGKVRHS----------YLQ 227
V+ +P E +C ++ N L ++ G+ + S Y
Sbjct: 207 VLLIP-ENYNCEKEINLFFQQNDYCSKFYLNQKLIIISGRNSNSKISQYHFSFSKLTYFD 265
Query: 228 NQSLNAAHIKWTAVRQETAS--------------------GYELVEVSTGGKLSRHNVHV 267
N ++N ++ ++ + ++L S+ +SR NV +
Sbjct: 266 NTNVNIVLKDYSVMKYYVTAKNNQLSSQIFSLYVDVKKNVSFDLSIASSNSFISRVNVGI 325
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G +++ + S ++ + D HSR+ ++P+ QLHK +V + G +F G ++
Sbjct: 326 DMNGVNSDICIKSISIVNDEGMTDFHSRITHNYPQCVSSQLHKNLVEKN-GHGIFSGKIQ 384
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V+ A ++A QL +SLLL ++ V++ P L+I D+VKC+HG+ I+DL+++Q+FY Q+R
Sbjct: 385 VHGTAFNSEACQLCKSLLLSKKSKVDIMPILEINNDNVKCTHGSTIADLDKNQIFYLQSR 444
Query: 388 GIDLETARKALVFSFGAEVIERFP 411
GI LET+ K LV SF +VI+ FP
Sbjct: 445 GISLETSYKMLVNSFIRDVIDSFP 468
>gi|119476386|ref|ZP_01616737.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
gi|119450250|gb|EAW31485.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 180/395 (45%), Gaps = 56/395 (14%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS-SSLDVSTDAQFPSLVLID 135
R S + L + WP+RK E +++T +M+ + + + ++ + L+L+D
Sbjct: 23 RQQSLELLQQSRWPTRKTEAWKYTSVNMLVDATFAETSDGIFDAPELIDNLDSIDLLLVD 82
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-----DLFWSINGMGAP 190
G +++ ++ +LP G+ S+ ++D +++ ++ +E G F +N + A
Sbjct: 83 GVLRS---DIGDLPSGL---SIYSIADTPIEQ-REWAAEVFTGAKPSKHYFGLVNDVLAT 135
Query: 191 DLGVIYVPAEG--------------NDCYWANSVL------------------------- 211
GV+ AEG N C +L
Sbjct: 136 -AGVLIDVAEGVKVDRPIRVICRQSNGCESHTRILMRLGSNAEAVIIEDFAGEVKSFNTG 194
Query: 212 --EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
E ++G+ + H + + A I S V G LSR ++ V
Sbjct: 195 FSEYIVGESATLEHYRIAMNTGEAISIGGCHFNLNYRSALNSTVVGLGSSLSRLDIDVNH 254
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
+G +L++F+LL +T DLHS + G + + IVA S +AVF+G + ++
Sbjct: 255 IGEYATAKLNAFYLLNGSETFDLHSSIEHIAANGTSEENVRGIVADS-SRAVFNGRIHIH 313
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+T A R+LLL A + KP L+I ADDV+C+HGA I+++++ L+Y Q+RG+
Sbjct: 314 RNAQKTLAELNNRNLLLSRNAEIYTKPELEIYADDVRCAHGATIAEIDKEALYYLQSRGM 373
Query: 390 DLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
A+ L F F E++++ P ++ + H++
Sbjct: 374 SKAQAQIMLSFGFINELVDQMPNQNLAAWLRPHLR 408
>gi|391227906|ref|ZP_10264113.1| FeS assembly protein SufD [Opitutaceae bacterium TAV1]
gi|391223399|gb|EIQ01819.1| FeS assembly protein SufD [Opitutaceae bacterium TAV1]
Length = 450
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 121/232 (52%), Gaps = 5/232 (2%)
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
++ AE N + A+ V ++ G G ++ + Q S + ++ E + + V
Sbjct: 217 FFISAEANARHLASGVNDLHAGPGAQLTYVGAQAWSGQTLAFQSNSIVAERDARVLSLNV 276
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCI 312
GG+ +RH H + LGP +E+ L ++D +++ R L H PR L+K
Sbjct: 277 HLGGRRARHESHSRLLGPGAHSEM--LALTIADGSREFDQRTLQTHAAPRTSSNLLYKNA 334
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ + + +F G + V AQ+TDA Q R+L+L A N P L+I A+DV+C+HG+
Sbjct: 335 LLDT-AKTIFSGLIIVEPDAQKTDAYQSNRNLMLSDAAEANSLPGLEIEANDVRCTHGST 393
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
S +E Q FY QARGID + A + LVF F EV+ + S+ + +V+ ++
Sbjct: 394 TSRIEPEQQFYLQARGIDPKNAHELLVFGFFEEVLGKLENESLHDALVALIR 445
>gi|190891949|ref|YP_001978491.1| Fe-S cluster assembly ABC transporter permease [Rhizobium etli CIAT
652]
gi|190697228|gb|ACE91313.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 652]
Length = 424
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 1/209 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + + + ++ +GKG ++ LQ Q + H+ V + + ++ GGKL
Sbjct: 196 GDAAFVSHISDITVGKGTELTWIILQQQGADDTHLGQIRVDLGADAKLRMFVINAGGKLV 255
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +H+ G + L +LL +D D+ L D P ++ + +V + V
Sbjct: 256 RQELHINVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGV 314
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L
Sbjct: 315 FQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHL 374
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERF 410
+Y ARGI AR LV +F AE++E
Sbjct: 375 YYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|292488155|ref|YP_003531036.1| FeS assembly protein SufD [Erwinia amylovora CFBP1430]
gi|292899365|ref|YP_003538734.1| SufB-SufC-SufD cysteine desulfurase activator complex protein
[Erwinia amylovora ATCC 49946]
gi|428785092|ref|ZP_19002583.1| FeS assembly protein SufD [Erwinia amylovora ACW56400]
gi|291199213|emb|CBJ46328.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Erwinia amylovora ATCC 49946]
gi|291553583|emb|CBA20628.1| FeS assembly protein SufD [Erwinia amylovora CFBP1430]
gi|426276654|gb|EKV54381.1| FeS assembly protein SufD [Erwinia amylovora ACW56400]
Length = 426
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 103/170 (60%), Gaps = 7/170 (4%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RH+ + G + ++S L + + D SR L+H +GYC RQLHK IV
Sbjct: 252 GAGLTRHHTSTRLDGEGSFLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV- 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPR-ATVNVKPNLQIIADDVKCSHGAAI 373
+AVF+G +KV ++A +TD GQ+ + LL R A V+ KP L+I ADDVKC HGA I
Sbjct: 309 RDRARAVFNGIIKVAKHALKTD-GQMNNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATI 367
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E Q+FY ++RGID A++ ++++F AE+ E +++ V+ +
Sbjct: 368 GRIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDETLKEAVMQRI 417
>gi|149196445|ref|ZP_01873500.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
gi|149140706|gb|EDM29104.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
Length = 434
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N + ++V+ + + +S LQN+S + ++ R + + S+GG LSRH + V
Sbjct: 209 NIMTDIVLQERSVLTYSRLQNESEESVNVSALRARLAADAKFNSSVFSSGGALSRHFMDV 268
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGN 325
+ G ET+L L + T +R ++ H P QL+K ++ S + VF+G
Sbjct: 269 ELNGKHAETDL--LGLFTTKGTMHADNRGIIRHNVPECEANQLYKGVLDDS-SRGVFNGI 325
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V + R AQ T+A Q++R+LLL +A V+ KP L + ADDVK +HGAAI L +++LFY Q
Sbjct: 326 VNIARDAQLTNATQMSRNLLLSRQARVDAKPELDVYADDVKAAHGAAIGQLSDAELFYLQ 385
Query: 386 ARGIDLETARKALVFSFGAEVIERFP 411
R I E A + L+ F EVI++ P
Sbjct: 386 TRCISREEAIQMLIKGFMHEVIDKAP 411
>gi|389690950|ref|ZP_10179843.1| FeS assembly protein SufD [Microvirga sp. WSM3557]
gi|388589193|gb|EIM29482.1| FeS assembly protein SufD [Microvirga sp. WSM3557]
Length = 437
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 184/439 (41%), Gaps = 68/439 (15%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
T ++ ++Q ES + +LP + + Q + S P R+ E F++TD
Sbjct: 9 TPAETALVQAFESAKTALPGNGEARAQAF----------EQFNSRGLPHRRVEEFKYTDL 58
Query: 103 SMIKSSQIQPITRPSSSLDVST---DAQFPSLV------LIDGFIQNSALNLSNLPDGVY 153
+ ++ P S+ + T +A+ S V ++G A++ NLP+ V
Sbjct: 59 RALLR-EVAPFAEAPSAEESRTALANAKALSGVDALQVPFVNGHFVRDAVDFHNLPENVE 117
Query: 154 VGSLLG------------------------------VSDGIMKRVSDFISEFQCGDLFWS 183
+ L ++DG+M RV+ + +
Sbjct: 118 IVPLAEAMANGHEWLSRLSPVPWANDNPVYQLNTSFMADGVMIRVAGAVERPVHLRFVTA 177
Query: 184 INGMGAPDLGVIYVPAEGNDC-------------YWANSVLEVVIGKGGKVRHSYLQNQS 230
N A V+ V EG + N V+E++ G V+H + +
Sbjct: 178 SNAAVATATRVLVVVEEGASVTLLETHESTDGANHQPNDVVEMIAGDRTNVQHVRVNAEG 237
Query: 231 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 290
A + A + + + + V+ G SRH V G +T ++ +L Q
Sbjct: 238 DKALALSTLAAKIGGEAVFNSINVTAGSATSRHQVFAVLNGENTNLRVNGTTMLKGSQHG 297
Query: 291 DLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEP 348
D S L+++H +C R+L K ++ + VF G + V +AQ+TD ++ +LLLE
Sbjct: 298 D--STLVVEHGAPHCESRELFKTVIDNE-ATGVFQGKIIVPHHAQKTDGRMMSAALLLEE 354
Query: 349 RATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
++N KP L+I ADDV+C+HGA L+E LFY ARG+ + A LV +F E +E
Sbjct: 355 GGSMNNKPELEIFADDVQCAHGATCGQLDEDLLFYLMARGLPKKEAESLLVQAFLGEALE 414
Query: 409 RFPYPSIRNQVVSHVKNLM 427
++R +V V+ +
Sbjct: 415 FVENEAVREALVGTVEGWL 433
>gi|343495463|ref|ZP_08733614.1| dufD protein [Vibrio nigripulchritudo ATCC 27043]
gi|342822906|gb|EGU57584.1| dufD protein [Vibrio nigripulchritudo ATCC 27043]
Length = 418
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 315
GKL RHN E E++S +L DQ D +R L H +C Q HK ++
Sbjct: 248 GKLIRHNTSSVLKAEGGEIEMNSLNLPKQDQVFD--TRTFLRHKSAHCNSHQTHK-VIGK 304
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
G VF+G + V++ A +TD +LLL +A VN KP L+I ADDVKCSHGA
Sbjct: 305 DNGVGVFNGMIYVDKGAIKTDGQMDNHNLLLSEKAQVNSKPQLEIYADDVKCSHGATTGQ 364
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
++++Q+FY QARGI A K + F+F E+ + + +R ++ ++
Sbjct: 365 IDQNQVFYLQARGIPKAKAEKMITFAFAGELTDAIEHEEVRKHIIRRIE 413
>gi|320449480|ref|YP_004201576.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
gi|320149649|gb|ADW21027.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
Length = 430
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 182/416 (43%), Gaps = 68/416 (16%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P + + R + + P+PS+KDE +R+TD S + +
Sbjct: 13 SRALKEPGWVLEKRLKALEAFARLPYPSKKDEAWRYTDLSEAPLEQEVETPKGLSLSRDE 72
Query: 109 QIQPITRPSSSLDVS----------TDAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSL 157
+ + R DVS A+ P + G + S A L P V
Sbjct: 73 LPELVKRRLEKTDVSGFLVFVGPDLVYAEVPEELSAKGLVFTSLAEALKTHPGKVEATLF 132
Query: 158 LGV--SDGIMKRVSDFISEFQCGDLFWSINGMGAPD-LGVIYVPAEGNDCYWANSVL--- 211
GV D S F F G + G+ LGV V EG S++
Sbjct: 133 RGVYVEDKFAAENSAF---FTHGAFLYVPAGLEVEKPLGVFKV-LEGGKASAGRSLIFLE 188
Query: 212 -------------------------EVVIGKGGKVRHSYLQNQSLNAAHI-KWTAVRQET 245
E+V+ G ++RH+++Q H + A+ +
Sbjct: 189 DNAKAAYIEEYLSLDLPPTLHLSATEMVLRPGARLRHAHVQTLGDGVWHFHRQRALLERD 248
Query: 246 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 305
A+ +LV V+ GG+ +R V + LGP E+E+ + Q D ++ L H +
Sbjct: 249 AALNDLV-VNLGGRYARSEVASELLGPGAESEMLGLYFGHGLQHFDHYT--LQHHVEHHT 305
Query: 306 RQ--LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
R L+K V +AVF G +K+ R AQ+TDA Q R+L+L P A V+ P L+I A+
Sbjct: 306 RSDLLYKGAVKDE-ARAVFSGLIKLERGAQKTDAYQANRNLILSPTARVDSIPQLEIGAN 364
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
DV+C+HG+ + ++E QLFY Q+RG+ A++ LV + A+V+ R P ++R +
Sbjct: 365 DVRCTHGSTTAPVDEMQLFYLQSRGLSRSLAQELLVKAHLADVLNRIPLKALRAHL 420
>gi|374331347|ref|YP_005081531.1| FeS assembly protein SufD [Pseudovibrio sp. FO-BEG1]
gi|359344135|gb|AEV37509.1| FeS assembly protein SufD [Pseudovibrio sp. FO-BEG1]
Length = 427
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 5/219 (2%)
Query: 186 GMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 245
G GA L + + Y +N++ EV +G + LQ +S A HI+ ++
Sbjct: 179 GSGAKALIIESFEGDAEAAYQSNALTEVKVGDKANIHWLKLQVESEKAQHIETLSIELGA 238
Query: 246 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRG 303
+ ++ + G LSR + ++ G T L LL + Q D+ L ++H P
Sbjct: 239 ETNFQHFIYNEGSALSRAQLFLEFKGEGTHAGLRGTCLLKNSQHADI--TLFVNHAVPEC 296
Query: 304 YCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
R+ ++ +V +AVF G + V AQ+TD + +SLLL A +N KP L+I AD
Sbjct: 297 ESREYYRAVVDDK-ARAVFQGKIIVEPGAQKTDGQMMIKSLLLSDTAEINAKPELEIFAD 355
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSF 402
DV+C+HG+ D++E LFY ARGI ARK LV +F
Sbjct: 356 DVQCAHGSTTGDIDEDLLFYLMARGIPEAQARKILVLAF 394
>gi|312172293|emb|CBX80550.1| FeS assembly protein SufD [Erwinia amylovora ATCC BAA-2158]
Length = 426
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 103/170 (60%), Gaps = 7/170 (4%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RH+ + G + ++S L + + D SR L+H +GYC RQLHK IV
Sbjct: 252 GAGLTRHHTSTRLDGEGSFLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV- 308
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPR-ATVNVKPNLQIIADDVKCSHGAAI 373
+AVF+G +KV ++A +TD GQ+ + LL R A V+ KP L+I ADDVKC HGA I
Sbjct: 309 RDRARAVFNGIIKVAKHALKTD-GQMNNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATI 367
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E Q+FY ++RGID A++ ++++F AE+ E +++ V+ +
Sbjct: 368 GRIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDETLKEAVMQRI 417
>gi|367477660|ref|ZP_09477007.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
gi|365270110|emb|CCD89475.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
Length = 440
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 177/435 (40%), Gaps = 72/435 (16%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + +R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGAGKVADVRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLDVSTDAQF--------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
P ++ A LVL+DG + +L+ LP GV V +L V D
Sbjct: 69 PLAGAPDAAALAKAKAAIALVAIDGAAKLVLVDGVVAAELSDLAALPAGVTVRTLRAVLD 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIY-------------------------- 196
+ + D S+N A D GV+
Sbjct: 129 EASNESRGDLLLTKATDPMLSLNAALATD-GVVVTVADGAQLSAPLHLIHVATTSKAARY 187
Query: 197 -------------------VPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 237
+ A+G Y AN + +G G ++ H L + +A +I
Sbjct: 188 SRSHVKVGQGARATLVETSIAADGVAAYQANDTGVIWVGDGAQLSHIRLMRDAADAVNIS 247
Query: 238 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 297
S L +++GG +SR G +E ++ +LL Q D+ L+
Sbjct: 248 SELFTVGAKSKLSLFNMTSGGAVSRLQAFFTLAGESSELIVNGVNLLRDKQHGDMT--LV 305
Query: 298 LDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 352
+DH C R+ + ++ AHS VF G + V AQQTD +TR+LLL A
Sbjct: 306 VDHAVPGCTSRENFRAVLDDRAHS----VFQGRIIVRPDAQQTDGKMMTRALLLSDEAEA 361
Query: 353 NVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPY 412
+ KP L+I ADDV C HGA L++S LFY +ARG+ + A+ L+ +F E IE
Sbjct: 362 DSKPELEIFADDVSCGHGATAGALDDSLLFYLRARGLPEKQAQALLIQAFVGEAIEAIED 421
Query: 413 PSIRNQVVSHVKNLM 427
+R +V++ ++ +
Sbjct: 422 DGLRERVIATAQDWL 436
>gi|336450976|ref|ZP_08621422.1| FeS assembly protein SufD [Idiomarina sp. A28L]
gi|336282232|gb|EGN75470.1| FeS assembly protein SufD [Idiomarina sp. A28L]
Length = 422
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 169/390 (43%), Gaps = 51/390 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA----QF 128
L +R ++ TL WP+R+ E +R+T + ++ S+++ A
Sbjct: 19 LSPVRQTALATLREQAWPTRRTEAWRYTSLHEVAELELAQANSAQSTVNAEAPAIEGLNS 78
Query: 129 PSLVLIDGFIQNSALNLSNL--PDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSIN 185
LV +D + S L P+GV V SL GV+ R+S ++ + LF +N
Sbjct: 79 LDLVFVDA---QPVTDFSKLILPEGVTVTSLHGVNADQQARISKIFNQAKPTHHLFGLVN 135
Query: 186 GMGAPDLGVIYVPAEGN------------DCYWANSVLEVVIGKGGKV---RHSYLQNQS 230
+ A VI V A D ++ + V +G KV H S
Sbjct: 136 DVLAEQGVVIDVAAGAEIEQPIRIVNFVTDGVESHHRVLVNVGDNAKVTVIEHGAGNGHS 195
Query: 231 LNAA-------------HIKWTAVRQET----ASGYELVE--------VSTGGKLSRHNV 265
+N A H ++ QE S ++L E V G +L+R +
Sbjct: 196 MNTAYAEYVLGSETKLEHYRFAMHGQEAIHMGGSHFKLGEHSRLNSTIVGYGSRLTRIDT 255
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
V +++ +LL + DLH+ + P G + + IV +A+F+G
Sbjct: 256 DVIHAAEHAFAKMNCIYLLAPKEHFDLHTTIEHAKPNGTSEENARGIVGDK-AKAIFNGR 314
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ ++R AQ+T A R+LLL +N KP L+I ADDV+C+HGA ++++ E +L+Y Q
Sbjct: 315 IHIHRDAQKTLAELNNRNLLLSRGGQINTKPELEIYADDVQCAHGATVAEIAEEELYYLQ 374
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSI 415
RGI A L F F E++ + P ++
Sbjct: 375 TRGIPRSQALVMLNFGFVQELVNQMPNKAL 404
>gi|422014535|ref|ZP_16361145.1| cysteine desulfurase activator complex subunit SufD [Providencia
burhodogranariea DSM 19968]
gi|414100755|gb|EKT62366.1| cysteine desulfurase activator complex subunit SufD [Providencia
burhodogranariea DSM 19968]
Length = 434
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 15/230 (6%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELVEVST 256
+ ++ S L V +G + RH L N++ A H + Q +S + L
Sbjct: 207 DKAHFTGSRLTVEVGDNAQYRHFKLNNENNQAQHFAHNDIVVGRDSQVLSSSFLL----- 261
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G KL+R++ Q G L+S L + D +R L+H G+C RQLHK I
Sbjct: 262 GAKLTRNHSSAQLEGESANLSLNSLLLPKDAEIAD--TRTYLEHNAGHCTSRQLHKVIAM 319
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
S +AVF+G +KV+ A +TD +LLL ++ ++ KP L+I ADDVKC HGA +
Sbjct: 320 DS-SKAVFNGVIKVSPNALKTDGQMSNNTLLLGEKSEIDTKPQLEIYADDVKCGHGATVG 378
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
+++ QLFY ++RGID + A+ ++ +F AE+ E ++ V++ ++
Sbjct: 379 RIDDEQLFYLRSRGIDGKAAKHMIIIAFAAELTESIESEELKQAVMASIR 428
>gi|409199078|ref|ZP_11227741.1| ABC transporter permease [Marinilabilia salmonicolor JCM 21150]
Length = 463
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 186/440 (42%), Gaps = 80/440 (18%)
Query: 50 IQLAESLED---SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK 106
I LAE ++ ++ S SSS+ L LRD + PS K E +++T+ +
Sbjct: 13 ISLAELFDENRAAIESHSSSV-----LNSLRDEAFDAFQELGIPSNKVENYKYTNLQPLF 67
Query: 107 SSQIQPITRPSS---------SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL 157
S +P + S DV T ++ L++G+ N LP G+ +GS+
Sbjct: 68 SGDFTFSLKPETLTENLEDIFSCDVDTLDSI-TIYLVNGWYYTRN-NPGVLPKGLVIGSM 125
Query: 158 LGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPA------------ 199
++ K D I ++ D + N M A D ++VP
Sbjct: 126 AQMA----KENPDLIEKYYGTRAPHLSDGAVAFNTMFAQDGFFVHVPKGVAVERPIQIVN 181
Query: 200 ------------------EGND------C--------YWANSVLEVVIGKGGKVRHSYLQ 227
E N C + NSV E +GK ++ LQ
Sbjct: 182 ILMSEDALMTTQRNLVVMEDNSEARIMVCDHTLTTGKFVMNSVTEGYVGKDARLDLYNLQ 241
Query: 228 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 287
NQ + Q S ++ ++R+N+ ++ G E +LL D
Sbjct: 242 NQHNATTQVAGFYFEQHENSHLATNNLTLHAGVARNNIELKLAGSHAEGHAYGLYLL--D 299
Query: 288 QTQDLHSRLLLDH--PRGYCRQLHKCIVA-HSLGQAVFDGNVKVNRYAQQTDAGQLTRSL 344
+ Q + + +DH P + +L K ++ HS G F G + V AQ+T+A Q +L
Sbjct: 300 KNQHVDNFSYIDHAVPDCFSDELFKGVLDDHSTG--AFTGKIMVRPDAQKTNAYQSNNNL 357
Query: 345 LLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGA 404
LL A +N KP L+I ADDVKCSHGA + ++E +FY + RGI+ E A L+++F
Sbjct: 358 LLTNDAKMNTKPQLEIYADDVKCSHGATVGQIDEDAMFYLRTRGINKEEATILLMYAFAY 417
Query: 405 EVIERFPYPSIRNQVVSHVK 424
EVIE+ +R Q+ + V+
Sbjct: 418 EVIEKIKVEPLREQIRTLVE 437
>gi|429768985|ref|ZP_19301113.1| SufB/sufD domain protein [Brevundimonas diminuta 470-4]
gi|429188336|gb|EKY29224.1| SufB/sufD domain protein [Brevundimonas diminuta 470-4]
Length = 340
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 5/218 (2%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y A++ +E+ + +V L N+ +A + VR E Y ++TG +L RH
Sbjct: 118 AYVAHNKVEIDVAADAEVTRIVLTNEPADAISVAEAEVRLEAGGRYRQTIIATGARLQRH 177
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAV 321
++ + + +LL + DL + ++DH P G QL K +V + V
Sbjct: 178 ETRLRHGAEGADARVDGLYLLNGARHFDLTT--VIDHVSPNGTTSQLIKGVV-RDEARGV 234
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V + A TDA L+ R ++VKP L I AD+V+C+HGA + L+ES L
Sbjct: 235 FQGKILVQKGADDTDARMGHHGLIASDRGEIDVKPELIIYADEVQCAHGATVGTLDESAL 294
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
FY Q RGI + AR L +F EV++R + R V
Sbjct: 295 FYMQQRGISADEARALLTHAFLIEVVDRIEHEGAREVV 332
>gi|407892711|ref|ZP_11151741.1| hypothetical protein Dmas2_01215 [Diplorickettsia massiliensis 20B]
Length = 402
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 167/390 (42%), Gaps = 53/390 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS---SQIQPITRPSSSLDVSTDAQFP 129
L + R S+ L +P RK +++T S + S P++ + +L +
Sbjct: 5 LTEQRQSALARLTEMGFPDRKHAAWKYTPLSSLLGKPFSATDPLSAATQTLVLEKSTSDY 64
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-------------------SDGIMKRVSD 170
LV +DGF ++ ++ LP GV +GSL S+ + +
Sbjct: 65 RLVFVDGFFISTLSTIAPLPPGVQIGSLATFLQQSPTLVSEQKINPIQRDSNSFIDLNTA 124
Query: 171 FISEFQCGDLFWSINGMGAP---------DLGVIYVP--------------------AEG 201
F+ + D+ +I + AP DLG I + E
Sbjct: 125 FLQDGAYIDVAENIQ-LSAPIELVFIATCDLGFIPIRNRIQLGPSSQAVVVEKYLSLTEK 183
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
C + N V E + ++ H L +L + H+ V Q+ S ++ G+
Sbjct: 184 PLCTFTNVVTECTLENQSQLEHYKLIRDTLTSFHLGHLCVNQQAGSQCAAYSLALQGQFI 243
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +V + L +L + Q H+ + + +QL+K ++A + A
Sbjct: 244 RSDVTIALQQTGARCRLQGLYLPKNKQHVSHHTVIAHQDADTHSQQLYKGVLADN-ATAA 302
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V +A ++ A QL ++LLL +A VN +P L+I DD++CSHGA++ L+E L
Sbjct: 303 FQGKIIVEPHAAKSRAQQLNKNLLLSAQAEVNTQPQLEIFTDDIQCSHGASVGQLDEKAL 362
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFP 411
FY Q+RG+ AR+ L+ +F ++++ P
Sbjct: 363 FYLQSRGLSECKARETLINAFLGDILQTIP 392
>gi|339478052|ref|YP_004706872.1| FeS assembly protein SufD [Candidatus Moranella endobia PCIT]
gi|338172603|gb|AEI75004.1| FeS assembly protein SufD [Candidatus Moranella endobia PCIT]
Length = 437
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G L+RH Q G ++S L + D +R L+H +G+C RQLHK ++A
Sbjct: 263 GAGLTRHQTSAQLNGEGANIAINSLLLPSAADISD--TRTYLEHNQGHCFSRQLHK-VIA 319
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+ V +G +KV + A +TD +LLL+ V +P L+I ADDVKCSHGA +
Sbjct: 320 RDHGKGVCNGLIKVAKNALKTDGKMTNNNLLLDRMTEVATQPKLEIYADDVKCSHGATVG 379
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
++E Q+FY ++RGI + A++ ++++F AEV +R +R+ V++ +
Sbjct: 380 RIDEEQIFYLRSRGIARKEAKQMIIYAFAAEVTDRICNDVVRDTVLTRI 428
>gi|437859259|ref|ZP_20847841.1| cysteine desulfurase activator complex subunit SufD, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
gi|435336778|gb|ELP06568.1| cysteine desulfurase activator complex subunit SufD, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
Length = 146
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Query: 294 SRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRAT 351
+R L+H +GYC RQ HK IV+ G+AVF+G + V ++A +TD +LLL A
Sbjct: 7 TRTWLEHNKGYCNSRQSHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAE 65
Query: 352 VNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
V+ KP L+I ADDVKCSHGA I +++ Q+FY Q+RGI + AR ++++F AE+ E
Sbjct: 66 VDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIH 125
Query: 412 YPSIRNQVVSHV 423
+++ QV++ +
Sbjct: 126 DSALKQQVLARI 137
>gi|335419037|ref|ZP_08550095.1| FeS assembly protein SufD [Salinisphaera shabanensis E1L3A]
gi|334897172|gb|EGM35308.1| FeS assembly protein SufD [Salinisphaera shabanensis E1L3A]
Length = 442
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 181/430 (42%), Gaps = 80/430 (18%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D ++ + A +E LP S ++ Q+ R + + T +P + E +++T +
Sbjct: 9 DHYLAEYAR-IERDLPGSDAN-------QRARKDALKAFTDTGFPDTRQEDWKYTSLRPL 60
Query: 106 K------SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG 159
+ SS+ ++ + + D + +V++DG L LP+GV V S
Sbjct: 61 EKRRFEISSEAGDVSEKELAAFLPADLEAYRIVIVDGHFSPRLSALDGLPEGVVVQSFAE 120
Query: 160 -VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAE------------------ 200
+ + RV E Q G L +N A D ++V A
Sbjct: 121 YLRNNDDARVKASAIESQPGSL-SDMNAAFATDGAYVHVAANAAADKPIHVITLSSGGHE 179
Query: 201 ---------------------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 233
G+ Y+ N V E V+G+ ++ +Q +S
Sbjct: 180 ERMSQLRHRYVMDPSSQATVIEHYVGLGDKPYFTNVVTEAVMGQNAQLTRCRVQQESDRG 239
Query: 234 AHIKWTAVRQETAS-----GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 288
H Q S G++L GG+L+R + + + + P+ E ++ Q
Sbjct: 240 YHTASFFAHQTRDSRVFNHGFDL-----GGRLARTDTNTRLVDPNAEVHFYGVYIPTGRQ 294
Query: 289 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEP 348
D H+ + D R+++K ++A G+ VF+G + + + AQ+TD+ +LLL
Sbjct: 295 HMDNHTCVDHDTEHSVSREIYKGVLAEH-GRGVFNGKILIRKDAQKTDSDLSCDALLLSD 353
Query: 349 RATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSF------ 402
+A V+ KP L+I ADDV +HG+ + L+E +FY ++RG+ E AR L +SF
Sbjct: 354 KAEVDAKPELEIYADDVVAAHGSTVGQLDEDAVFYLKSRGVADEGARAILTYSFANALVQ 413
Query: 403 --GAEVIERF 410
G E +ERF
Sbjct: 414 KVGIEPVERF 423
>gi|110834728|ref|YP_693587.1| ABC transporter permease [Alcanivorax borkumensis SK2]
gi|110647839|emb|CAL17315.1| permease component of ABC-tranporter [Alcanivorax borkumensis SK2]
Length = 409
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 167/394 (42%), Gaps = 52/394 (13%)
Query: 63 SSSSLPQPLPLQKL----RDSSS----QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
S+SSL Q L Q L R+ S+ L + +P RK E +++T + + I
Sbjct: 4 SASSLAQELKTQALANAQRNGSAGDALAALQAASFPERKTESWKYTSLQALADGHLNAIA 63
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
D + P+L I N L NLPDGV + +G+ + + S
Sbjct: 64 ------DGEINPPLPALSEHVVTINNGKLVDHNLPDGVTLSHDGPAINGLQTPFAFYNSA 117
Query: 175 F-------------------------------QCGDLFWSINGMGAPDLGVIYVPAEGND 203
C + GA + + A+G
Sbjct: 118 VASQPIVLTVAANTRIEQPIHVQIQAASDTPAHCNPRLVVVLNQGAEAAVIEHYHAQGK- 176
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
N+V ++ ++ H LQ + + HI + Q+ AS + ++ TG +L R+
Sbjct: 177 -ALTNAVTALITADNAQLTHYRLQGEQASTIHIGTLIIDQQGASKVDSYQLMTGNRLRRN 235
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAV 321
+V + L + EL+ + V + +++ ++H P G Q K + A G+AV
Sbjct: 236 DV--RALMNKSGAELNMKGIFVVRDNSHVDNQMCVEHAVPNGESDQNFKGL-AGERGKAV 292
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G + ++ A T+AG ++LLL P A +N KP L+I DDVKC+HG + L+ Q
Sbjct: 293 FNGRIHIHPGASGTNAGLSNKNLLLNPGAEINTKPELEIYNDDVKCAHGTTVGQLDAMQQ 352
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
FY Q+RGI A++ L F E++ P+ +
Sbjct: 353 FYLQSRGIPAAEAKRMLSLGFVNELLMTLPHEKV 386
>gi|456355250|dbj|BAM89695.1| SufD, needed for fhuF Fe-S center production/stability [Agromonas
oligotrophica S58]
Length = 440
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 171/420 (40%), Gaps = 63/420 (15%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
LP + +R + T P R+ E +++TD + + P ++ A
Sbjct: 25 LPGTGKVADIRREAFAAFERTGLPHRRIEEWKYTDLRALVREVLPLAGLPDAAALSRARA 84
Query: 127 QF--------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
LVLIDG + +LS LP GV V +L V D + +
Sbjct: 85 AVASVAIEGATKLVLIDGVVAADLSDLSALPAGVTVRTLRAVLDDQSNDARGDLLLTKAS 144
Query: 179 DLFWSINGMGAPD---------------LGVIYVPAEGNDCYWANSVLEV---------- 213
D S+N A D L +I+V ++ S L V
Sbjct: 145 DPMLSLNAALATDGVVITVADGAQLSAPLQLIHVATAAKSARYSRSHLRVGQGARATLVE 204
Query: 214 -------------------VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
+G + H L + +A ++ V S L +
Sbjct: 205 NSIAVDGAAAYQANDAAVISVGDDAALSHVRLMRDATDALNVSSELVTVGARSKLSLFNM 264
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCI 312
++GG +SR V G +E ++ +LL Q DL L++DH C R+ + +
Sbjct: 265 TSGGAVSRLQVFFTMAGEGSELIVNGVNLLRDKQHGDLT--LVVDHAVPGCTSRENFRAV 322
Query: 313 V---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
+ AHS VF G + V +AQ+TD +TR+LLL A + KP L+I ADDV C H
Sbjct: 323 LDDRAHS----VFQGRIIVRPHAQKTDGKMMTRALLLSDEAESDSKPELEIFADDVSCGH 378
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
GA L++S LFY QARG+ + A+ LV +F E IE +R +V++ ++ + T
Sbjct: 379 GATAGALDDSLLFYLQARGLPEKQAQALLVQAFVGEAIEAIEDDGLRERVIASAQDWLET 438
>gi|365887511|ref|ZP_09426350.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3809]
gi|365336882|emb|CCD98881.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3809]
Length = 440
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 181/432 (41%), Gaps = 70/432 (16%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + +R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGTGKVADIRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGV-- 160
P ++ + S LVL+DG + +L+ LP GV V +L V
Sbjct: 69 PLAGAPDAAALARARSAIASVAIEGAAKLVLVDGVVAAELSDLAALPSGVTVRTLRAVLE 128
Query: 161 ---------------------------SDGIMKRVSD---------FISEFQCGDLF-WS 183
+DG++ V+D I G +S
Sbjct: 129 EQGNEARGDLLLTKASDPMLSLNAALATDGVVVTVADGTQLSSPVQLIHVATAGKAARYS 188
Query: 184 IN----GMGA-PDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 238
+ G GA L + AEG Y AN + +G ++ H L + A ++
Sbjct: 189 RSHLRVGHGARATLVETSIAAEGATAYQANDAAVISVGDEAQLSHIRLMRDAAEAVNVSS 248
Query: 239 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 298
S L +++GG +SR G +E ++ +LL Q D+ L++
Sbjct: 249 ELFTVGARSKLSLFNMTSGGAVSRLQAFFTLAGEASELIVNGVNLLRDKQHGDMT--LVV 306
Query: 299 DHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
DH C R+ + ++ AHS VF G + V + AQQTD +TR+LLL A +
Sbjct: 307 DHAVPGCTSRENFRAVLDDRAHS----VFQGRIIVRQDAQQTDGKMMTRALLLSDEAEAD 362
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
KP L+I ADDV C HGA L++S LFY +ARG+ + A+ L+ +F E IE
Sbjct: 363 SKPELEIFADDVSCGHGATAGALDDSLLFYLRARGLPEKQAQALLIQAFVGEAIEAIEDD 422
Query: 414 SIRNQVVSHVKN 425
+R +V++ ++
Sbjct: 423 GLRERVIAAAEH 434
>gi|343501675|ref|ZP_08739546.1| dufD protein [Vibrio tubiashii ATCC 19109]
gi|418478776|ref|ZP_13047869.1| dufD protein [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342817164|gb|EGU52050.1| dufD protein [Vibrio tubiashii ATCC 19109]
gi|384573326|gb|EIF03820.1| dufD protein [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 423
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 110/217 (50%), Gaps = 1/217 (0%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
S L +G+G H+ L +S H+ +R + + + G L R +
Sbjct: 199 SRLTNYVGEGACFHHTKLIEESPQQHHLGHNDIRLQRDAKATSTSLLLSGLLLRTQTSSE 258
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 328
G + E ++S L QT D + L + P Q+HK I+ AVFDG + V
Sbjct: 259 LCGDNGEIAMNSISLPTDKQTFDTRTYLKHNAPHCQSEQMHK-IIGRDQSNAVFDGMIYV 317
Query: 329 NRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARG 388
+ A +TD T SLLL A VN KP L+I ADDVKCSHGA L+ +Q+ Y +ARG
Sbjct: 318 DPTALKTDGQMDTHSLLLSDNAQVNCKPQLEIYADDVKCSHGATTGQLDPNQIAYMRARG 377
Query: 389 IDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
I+ A + L+ +F EV ++ +PS+RN V+S + N
Sbjct: 378 INRFNAEQMLMSAFVCEVADKIHHPSLRNYVISQLHN 414
>gi|378826027|ref|YP_005188759.1| ABC transporter involved in Fe-S cluster assembly [Sinorhizobium
fredii HH103]
gi|365179079|emb|CCE95934.1| ABC transporter involved in Fe-S cluster assembly [Sinorhizobium
fredii HH103]
Length = 425
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 170/395 (43%), Gaps = 45/395 (11%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L D+ + LP + LRD+ L + P+R+ E + +TD + + P
Sbjct: 15 ALVDAYTAQIGDLPGDGAVLSLRDTLVHELKTAGLPTRRVESWHYTDLRTLLRAV--PSA 72
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGV----YVGSLL------GV---- 160
PS+ D D P ++ ++N +L +LP+GV Y SLL G+
Sbjct: 73 DPSAFAD-RVDPIVPGSSVLS--VRNGQADLKSLPEGVTARSYTESLLDGSAVAGLAVLG 129
Query: 161 SDGIMKRVSDFI------------SEF-------------QCGDLFWSINGMGAPDLGVI 195
SD + R++ + +EF Q F G G+ +
Sbjct: 130 SDDAIGRINGGLVGGGLEIALAEGAEFEAPLEIQIAQSHGQAHTRFPVSFGAGSKATVIE 189
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+ D + +SV ++ + +G V LQ Q H+ + LV ++
Sbjct: 190 RHLSTNGDASFVSSVTDLTLAEGADVIWIILQQQGPADTHLGQIRFDLGKDAKLHLVVIN 249
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
GGKL R +H + G + L +LL D D+ L D P ++ + +V
Sbjct: 250 AGGKLVRQELHGKASGEGADLTLRGINLLGGDSHTDVTFTLSHDVPHTTSTEIIRNVV-F 308
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
+ VF G + V + AQ+TDA +LLL + KP L+I ADDV+C HGA + D
Sbjct: 309 DRAKGVFQGKILVAKDAQKTDAKMSCNTLLLSDEGDFSAKPELEIFADDVQCGHGATVID 368
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
++ +QLFY +RGI AR LV +F AE++E
Sbjct: 369 IDHTQLFYLLSRGIPENKARAMLVNAFVAEIVEEL 403
>gi|114319888|ref|YP_741571.1| FeS assembly protein SufD [Alkalilimnicola ehrlichii MLHE-1]
gi|114226282|gb|ABI56081.1| Iron-regulated ABC transporter permease protein SufD
[Alkalilimnicola ehrlichii MLHE-1]
Length = 441
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y A+ V E++ VR LQ + +A H+ + + + + GG++SR
Sbjct: 209 AYLASPVTEIIAEANANVRLDRLQREGADAFHLGAVHAEADRDARVHVQNFNFGGRISRV 268
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 323
+ + G E ++ +L + D H+ + D G+ QL K I+ +AVFD
Sbjct: 269 DYYGLLKGTAAEVIINGLYLGDRKRFTDQHTWMTHDCEHGHSSQLFKGILKDK-AEAVFD 327
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G +KV AQ+TD Q R+L+L P A + P L+I ADDVKCSHG+ + +L++ +FY
Sbjct: 328 GLLKVEEGAQKTDGFQENRNLILSPMALAHSNPRLEIYADDVKCSHGSTVGELDKEAVFY 387
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
++RG+D ++A+ L ++F EV+ S++
Sbjct: 388 LRSRGMDQDSAQALLTWAFANEVLSEVRLDSLKT 421
>gi|346225747|ref|ZP_08846889.1| ABC transporter permease [Anaerophaga thermohalophila DSM 12881]
Length = 463
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 203 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
D + N+V E + K ++ LQNQ + Q+ S + ++ + R
Sbjct: 217 DKFVINNVTEAFVDKNARLDFYNLQNQHNATTQVAGFYFEQKEDSYVKTNNLTLHTGVGR 276
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVA-HSLGQ 319
+N+ ++ G T E S+ L + D+ Q + + +DH P + +L K ++ H+ G
Sbjct: 277 NNITLKLAG--THAEGHSYGLYLLDKNQHVDNFSFIDHAVPDCFSDELFKGVLDDHATG- 333
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
F G + V AQ+T+A Q +LLL A +N KP L+I ADDVKCSHGA + L+E
Sbjct: 334 -AFTGKIMVRPDAQKTNAYQTNNNLLLTNDAKINTKPQLEIYADDVKCSHGATVGQLDEE 392
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV-KNLMGTTD 431
+FY ++RGI+ E A L+++F EVIE+ +R Q+ + V K G D
Sbjct: 393 AMFYLRSRGINREEATILLMYAFAYEVIEKIQVELLREQIRTLVEKRFRGELD 445
>gi|440226765|ref|YP_007333856.1| FeS assembly protein SufD [Rhizobium tropici CIAT 899]
gi|440038276|gb|AGB71310.1| FeS assembly protein SufD [Rhizobium tropici CIAT 899]
Length = 424
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 1/203 (0%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
+SV EV IGKG ++ LQ Q H+ + + +L ++ GGKL R +++
Sbjct: 202 SSVSEVKIGKGSEITWIILQEQGSEDTHLGQLRIDLGEDAKLKLFVINAGGKLVRQELYI 261
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 327
+ G + L +LL D D+ L D P ++ + +V + VF G ++
Sbjct: 262 KVAGEGADLTLRGINLLGGDTHTDVTMVLGHDVPNTGSTEVIRNVV-FDRARGVFQGMIR 320
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L+Y AR
Sbjct: 321 VAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVADIDGNHLYYLMAR 380
Query: 388 GIDLETARKALVFSFGAEVIERF 410
GI + AR LV +F AE++E
Sbjct: 381 GIPEKKARAMLVNAFVAEIVEEL 403
>gi|254469354|ref|ZP_05082759.1| FeS assembly protein SufD [Pseudovibrio sp. JE062]
gi|211961189|gb|EEA96384.1| FeS assembly protein SufD [Pseudovibrio sp. JE062]
Length = 428
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 5/219 (2%)
Query: 186 GMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 245
G GA L + + Y +N++ EV +G + LQ +S A HI+ ++
Sbjct: 180 GSGAKALIIESFEGDAEAAYQSNALTEVKVGDKANIHWLKLQVESEKAQHIETLSIELGA 239
Query: 246 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRG 303
+ ++ + G LSR + ++ G T L LL Q D+ L ++H P
Sbjct: 240 ETNFQHFIYNEGSALSRAQLFLEFKGEGTHAGLRGTCLLKDSQHADI--TLFVNHAVPEC 297
Query: 304 YCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIAD 363
R+ ++ +V +AVF G + V AQ+TD + +SLLL A +N KP L+I AD
Sbjct: 298 ESREYYRAVVDDK-ARAVFQGKIIVEPGAQKTDGQMMIKSLLLSDTAEINAKPELEIFAD 356
Query: 364 DVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSF 402
DV+C+HG+ D++E LFY ARGI ARK LV +F
Sbjct: 357 DVQCAHGSTTGDIDEDLLFYLMARGIPEAQARKILVLAF 395
>gi|398827252|ref|ZP_10585466.1| FeS assembly protein SufD [Phyllobacterium sp. YR531]
gi|398220098|gb|EJN06558.1| FeS assembly protein SufD [Phyllobacterium sp. YR531]
Length = 423
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 169/412 (41%), Gaps = 54/412 (13%)
Query: 36 QTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDE 95
Q T ++T D FV ++ E LP + RD++ + L + PSR+ E
Sbjct: 8 QPTAAESTLVDAFVDRMGE------------LPGDGEVVSARDNAIEALKTQGLPSRRVE 55
Query: 96 PFRFTDT--------------------SMIKSS--------------QIQPITRPSSSLD 121
+ +TD S+I S +I+ +T S
Sbjct: 56 AWHYTDLRTLLRSIPAYDSAAGSSALPSVIAGSSVATVSNGIALNAPKIEAVTFTKFSET 115
Query: 122 VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC---G 178
++ L + DG +N + + DG + V+DG+ I Q G
Sbjct: 116 LANGEAIRHLAIRDGDDAIGQINAAYVTDGWNIV----VADGVELDSPLEIQNAQTRGQG 171
Query: 179 DLFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 238
+ + + VI G ++ SV + I ++ L+ Q +A +
Sbjct: 172 HVRFPVQFGKGVKATVIERQTGGEGEGFSTSVSNLTIADDAEINWIILREQGADATQLAQ 231
Query: 239 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 298
T S L V+ GGKL R VHV G ++ +L +LL D D+ L
Sbjct: 232 FTATLGTNSKLTLYVVNAGGKLVRQEVHVLVKGEGSDFQLRGVNLLAGDTHTDVTMTLGH 291
Query: 299 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNL 358
Q+ + +V + VF G +KVNR AQ+TDA +LLL + KP L
Sbjct: 292 LVENTTSVQIVRNVVTDR-ARGVFQGQIKVNRIAQKTDARMACNTLLLSDDGEFDAKPEL 350
Query: 359 QIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
+I ADDV C HGA +++++ + LFY +ARGI AR L+ +F AE+IE
Sbjct: 351 EIFADDVACGHGATVTEIDGNHLFYLKARGIPENEARGLLIKAFVAEIIEEL 402
>gi|373849837|ref|ZP_09592638.1| FeS assembly protein SufD [Opitutaceae bacterium TAV5]
gi|372476002|gb|EHP36011.1| FeS assembly protein SufD [Opitutaceae bacterium TAV5]
Length = 450
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 121/232 (52%), Gaps = 5/232 (2%)
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
++ AE N + A+ V ++ G G ++ + Q S + ++ E + + V
Sbjct: 217 FFISAEANARHLASGVNDLHAGPGAQLTYVGAQAWSGQTLAFQSNSIVAERDARVLSLNV 276
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCI 312
GG+ +RH H + LGP +E+ L ++D +++ R L H PR L+K
Sbjct: 277 HLGGRRARHESHSRLLGPGAHSEM--LALTIADGSREFDQRTLQTHAAPRTSSNLLYKNA 334
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ + + +F G + V AQ+TDA Q R+L+L A N P L+I A+DV+C+HG+
Sbjct: 335 LLDT-AKTIFSGLIIVEPDAQKTDAYQSNRNLMLSDAAEANSLPGLEIEANDVRCTHGST 393
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
S +E Q FY QARGID + A + LVF F EV+ + S+ + +V+ ++
Sbjct: 394 TSRIEPEQQFYLQARGIDPKHAHELLVFGFFEEVLGKLENESLHDALVALIR 445
>gi|241204824|ref|YP_002975920.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858714|gb|ACS56381.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 424
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 156/393 (39%), Gaps = 61/393 (15%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
LP + LRD L P+R+ E + +TD + T P + D +
Sbjct: 25 GELPGNGTVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TVPQQAGDAGS 78
Query: 125 DAQFP------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
+A P L +I G N L Y LL DG +D +
Sbjct: 79 EALEPLVADATVLAVIQGH-SNQKATADGLGVSAYSEHLL---DG---SAADGLDALGSD 131
Query: 179 DLFWSINGMGAPDLGVIYVPAEG------------------------------------- 201
D ING D VI VPAE
Sbjct: 132 DAVGRINGSFVRDGYVIDVPAETELENPLEIQFIHAGGQTHTRLPVSFGAGVKATVIERH 191
Query: 202 ----NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
D + V ++ +G+G ++ LQ Q + H+ + + L ++ G
Sbjct: 192 RTVTGDAALVSHVTDITVGEGTELTWIILQQQGADDTHLGQIRIDLGADAKLRLFVINAG 251
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 317
GKL R +H++ G + L +LL D D+ L D P ++ + +V
Sbjct: 252 GKLVRQELHIKVTGEGADLTLRGINLLGGDTHTDVTMVLGHDVPNTGSTEVIRNVV-FDR 310
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
+ VF G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++
Sbjct: 311 AKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDID 370
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
+ L+Y ARGI AR LV +F AE++E
Sbjct: 371 ANHLYYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|85710908|ref|ZP_01041969.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
gi|85695312|gb|EAQ33249.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
Length = 415
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 187/415 (45%), Gaps = 74/415 (17%)
Query: 49 VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS 108
VI+ A +++D L + L KL++ S WP R+ E +R+T +++
Sbjct: 8 VIERAAAVDDWLSPVRAE-----ALAKLKEQS--------WPGRRTEAWRYTSLHAVEN- 53
Query: 109 QIQPITRPSSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
++ P+ S + A+ P+ LV +DG + S L NLP+G+ + SL
Sbjct: 54 ----LSLPTES---NAQAEAPAIKGLDAIDLVFVDGRL-TSDLAALNLPEGLTIRSLTDK 105
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAEGN------------DCYWAN 208
SD I ++V F LF +N + A VI V A D ++
Sbjct: 106 SD-IAEQV--FTQVKPSHHLFGLVNDVLATQGIVIEVAANATIERPIRVVNFATDNVESH 162
Query: 209 SVLEVVIGKGGK---VRHSYLQNQSLNAAHIKWT------------AVRQETA-----SG 248
+ + V +G K + H SLN A ++ A+ Q A S
Sbjct: 163 TRVLVSLGDNAKATVIEHGSGTGHSLNTAFAEYDIADNARLEHYRFALHQGEAIHVGGSH 222
Query: 249 YELVE--------VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 300
++L + G +L+R +V + G + ++ +LL + DLHS +
Sbjct: 223 FKLANKSRLNSTLIGYGSQLTRLDVDIIHAGEHAHAKFNNAYLLAPKEHFDLHSTIEHAM 282
Query: 301 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQI 360
P G + + I+ +AVF+G + ++R AQ+T A R+LLL A +N KP L+I
Sbjct: 283 PNGTTEENARGIIGDK-AKAVFNGRIHIHRDAQKTLAELNNRNLLLSRGAQINTKPELEI 341
Query: 361 IADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
ADDV+C+HGA +++++E L+Y RGID + A L F F E++ P ++
Sbjct: 342 YADDVQCAHGATVAEIDEEALYYLLTRGIDKQKALVMLNFGFVQEMVFDMPNEAL 396
>gi|338174481|ref|YP_004651291.1| hypothetical protein PUV_04870 [Parachlamydia acanthamoebae UV-7]
gi|336478839|emb|CCB85437.1| UPF0051 protein slr0076 [Parachlamydia acanthamoebae UV-7]
Length = 434
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 182/436 (41%), Gaps = 73/436 (16%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
ES SL + ++ L+K+R + L P+ +++ FR+ + +
Sbjct: 10 ESFHSSLEEAFRNVAGDPLLKKIRQKAWDHFLELGLPTPRNDVFRYVPLRKLFAHTYATA 69
Query: 114 TRPSSSLDVSTDAQFPS-------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
P+ LD + A F + LV ++G+ S ++S LP V V L + ++
Sbjct: 70 LTPA--LDKAKIADFIAPECIHSVLVFVNGYYVPSLSDISGLPTKVVVTPL----EQAVR 123
Query: 167 RVSDFISEFQCG-------DLFWSINGMGAPDLGVIYVPAE------------------- 200
F++ Q G D F ++N D +Y+P
Sbjct: 124 SFGAFLTN-QWGKTLMEETDPFATLNAAIHTDGIFVYIPPRLQVEKPIQILEIMDTEVPF 182
Query: 201 -------------------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 235
YW N V + I + VR++ + L
Sbjct: 183 MSMPRLHFFVGAQSELNVLSTLGSLSGSTYWVNQVADFSIEEQAHVRYTQ-TSYPLPPEC 241
Query: 236 IKWTAVRQ--ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 293
+ T+ R + S + V + G +RH+ V G + EL+ L D+ ++ H
Sbjct: 242 WQMTSTRAYLKKNSTFLAVHATEGSTTARHDYRVVLNGENAHAELNGAWTL--DEKREAH 299
Query: 294 SRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRAT 351
+ +L+DH C+ QL K I+ S + F+G + V + AQ+T+A QL +++L A
Sbjct: 300 THVLVDHQSPNCQSLQLFKGILNGS-SHSSFEGKILVRQAAQKTNAFQLNNNIILSDTAR 358
Query: 352 VNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
KPNL+I ADDVK SHGA + L++ QLFY + RG A++ LV F EV +
Sbjct: 359 AESKPNLEIFADDVKASHGATVGQLDKEQLFYLKTRGCPPVDAKRLLVDGFAQEVYNKIS 418
Query: 412 YPSIRNQVVSHVKNLM 427
PS+R + ++N +
Sbjct: 419 IPSVRQHLAQRMQNYL 434
>gi|160872499|ref|ZP_02062631.1| FeS assembly protein SufD [Rickettsiella grylli]
gi|159121298|gb|EDP46636.1| FeS assembly protein SufD [Rickettsiella grylli]
Length = 434
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 5/219 (2%)
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
I + ++ N Y+ NSV E + + H N+S A H+ +V Q+ S +
Sbjct: 205 IDMTSKKNTPYFTNSVTECYLSANSHIEHYQYINESQQAQHVGSLSVSQQENSQFSAYSF 264
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCI 312
+ L R ++ V+ L P + +L +L Q D + ++DH P+ + +K I
Sbjct: 265 ALNSALIRRDIIVKLLAPQAQCQLKGLYLAFRHQQIDYCT--VIDHVSPKTQSDEFYKGI 322
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ + +A F+G + V A Q+ A QL ++LLL + +N KP L++ DD+ C+HGA+
Sbjct: 323 IGDN-ARATFNGKLIVREDAIQSKAHQLNKNLLLSAHSEMNSKPQLELFTDDIHCTHGAS 381
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
I L+ LFY Q+RG+ + A LV +F ++++ P
Sbjct: 382 IGQLDNDALFYLQSRGLTINQATDLLVNAFAHDILQHMP 420
>gi|424881755|ref|ZP_18305387.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WU95]
gi|392518118|gb|EIW42850.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 424
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + V ++V+G+G ++ LQ Q H+ + + L ++ GGKL
Sbjct: 196 GDAALVSHVSDIVVGEGTELTWIILQQQGGEDTHLGQIRIDLGADAKLRLFVINAGGKLV 255
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +H++ G + L +LL D D+ L D P ++ + +V + V
Sbjct: 256 RQELHIKVTGEGADLTLRGINLLGGDTHTDVTMVLGHDVPNTGSTEVIRNVV-FDRAKGV 314
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L
Sbjct: 315 FQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHL 374
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERF 410
+Y ARGI AR LV +F AE++E
Sbjct: 375 YYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|220925675|ref|YP_002500977.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
gi|219950282|gb|ACL60674.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
Length = 439
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 200 EGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
EG D Y N L+ VI G +RH+ L + A + +V+ + E V V G
Sbjct: 207 EGPDGVAYQPNDALDAVIADGATLRHTRLNREGREAIALSTLSVKLGAKAHLETVNVVAG 266
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKCIVAH 315
SRH +++ G D ++ +L + Q D S LL DH G+ R+ K ++
Sbjct: 267 AAFSRHQLYLLFAGEDATATVNGATMLGNGQLGD--STLLADHAATGGFSREQFKTVI-D 323
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
VF G + V + AQ+TD + LLL + KP L+I ADDV C HGA
Sbjct: 324 GEATGVFQGKIIVEQAAQKTDGKMKSDCLLLSDEGQMMNKPELEIFADDVACGHGATCGA 383
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
L++ LFY ARG+ A LV +F E IE + R +++ V+N
Sbjct: 384 LDDDLLFYLMARGLPRGEAEGLLVQAFLGEAIEAISHEGAREAMIAVVEN 433
>gi|339000118|ref|ZP_08638740.1| Fe-S cluster assembly protein SufD [Halomonas sp. TD01]
gi|338762993|gb|EGP18003.1| Fe-S cluster assembly protein SufD [Halomonas sp. TD01]
Length = 446
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N V E+++ +G + H LQ L H+ V Q S Y ++ GG L R+++
Sbjct: 208 FTNVVAELMLDRGAILNHYKLQEAPLGDMHVASIHVEQSRDSRYSSYNLNLGGALVRNDL 267
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
G ET Q D H+++ + P + + +K I+ VF+G
Sbjct: 268 ISDLNGQGAETNFYGLFFGQGRQHIDNHTKVNHNAPLTFSNENYKGIL-DDRAHGVFNGK 326
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V R +Q+ + Q ++LLL RA ++ KP L+I ADDVKCSHG L+E ++ +
Sbjct: 327 VYVKRDSQKIEGFQSNQNLLLSDRARIDAKPELEIYADDVKCSHGTTTGQLDEDAIYALR 386
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
RGID TAR L +F EV+E+ I +V
Sbjct: 387 TRGIDKATARGLLTLAFAGEVLEQVALDVIAERV 420
>gi|325283587|ref|YP_004256128.1| FeS assembly protein SufD [Deinococcus proteolyticus MRP]
gi|324315396|gb|ADY26511.1| FeS assembly protein SufD [Deinococcus proteolyticus MRP]
Length = 450
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
+E D +A +E+V+ G ++R+ +QN HI+ + + V+ GG
Sbjct: 220 SEALDNAYAIGAVELVVKPGARLRYVSIQNWGKGVTHIQRQRGDVDKDGKLNSLVVTMGG 279
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSL 317
LSR + G E+E+ + + DQ D ++ P Y L+K + A S+
Sbjct: 280 TLSRTEMQSYVRGSGAESEMLALYFADEDQHFDHYTLQHHAAPNAYSDLLYKGVGADQSV 339
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
G VF G +KV+ AQ+TDA Q R+L+L A P L+I A+DVKCSHG+ +
Sbjct: 340 G--VFSGMIKVDLGAQKTDAYQKHRTLMLSSEARNFSVPQLEINANDVKCSHGSTTGPVG 397
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
E ++FY ++RGI ETA K LV +F +V+ R P S+ + + + +G
Sbjct: 398 EEEMFYLRSRGISKETAEKMLVTAFLEDVLGRVPLRSVTDYIEGIIAEKVG 448
>gi|282892126|ref|ZP_06300601.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498021|gb|EFB40365.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 434
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 8/227 (3%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ--ETASGYELVEVSTGGKLSR 262
YW N V + I + VR++ + L + T+ R + S + V + G +R
Sbjct: 212 YWVNQVADFSIEEQAHVRYTQ-TSYPLPPECWQMTSTRAYLKKNSTFLAVHATEGSTTAR 270
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQA 320
H+ V G + EL+ L D+ ++ H+ +L+DH C+ QL K I+ S +
Sbjct: 271 HDYRVVLNGENAHAELNGAWTL--DEKREAHTHVLVDHQSPNCQSLQLFKGILNGS-SHS 327
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
F+G + V + AQ+T+A QL +++L A KPNL+I ADDVK SHGA + L++ Q
Sbjct: 328 SFEGKILVRQAAQKTNAFQLNNNIILSDTARAESKPNLEIFADDVKASHGATVGQLDKEQ 387
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
LFY + RG A++ LV F EV + PS+R + ++N +
Sbjct: 388 LFYLKTRGCPPVDAKRLLVDGFAQEVYNKISIPSVRQHLAQRMQNYL 434
>gi|375143582|ref|YP_005006023.1| Iron-regulated ABC transporter permease protein SufD [Niastella
koreensis GR20-10]
gi|361057628|gb|AEV96619.1| Iron-regulated ABC transporter permease protein SufD [Niastella
koreensis GR20-10]
Length = 433
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N V+E+V+ K + LQ + +A+ + T ++Q V VS L R+N+
Sbjct: 208 FTNRVIEIVVEKDAITEYYKLQTDASHASQVATTHIQQIGKCVTHTVTVSLNEGLVRNNL 267
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFD 323
++ E L +L D H+ ++DH + +C +L+K ++ VF+
Sbjct: 268 NIVLDEEYCEAHLYGIYLQTGTSHIDNHT--VVDHAKPHCESNELYKGMLDDQ-STGVFN 324
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V + AQ+T+A Q +++LL A+VN KP L+I ADDVKCSHG I L+E LFY
Sbjct: 325 GKIFVRKDAQKTNAYQSNKNVLLSEGASVNTKPQLEIFADDVKCSHGCTIGRLDEESLFY 384
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
++RGI TA+ L+ F +++E+ IR V
Sbjct: 385 LRSRGITEATAKSLLLHGFAVDILEQIKLAPIREYV 420
>gi|359395489|ref|ZP_09188541.1| UPF0051 protein slr [Halomonas boliviensis LC1]
gi|357969754|gb|EHJ92201.1| UPF0051 protein slr [Halomonas boliviensis LC1]
Length = 446
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 63/387 (16%)
Query: 89 WPSRKDEPFRFTDT--------SMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQN 140
+P+R+DE +++TD ++ ++ P + +++L + DA L +DG +
Sbjct: 41 FPTRRDEEWKYTDVRSIAQGSFALADDAEFSPAS--AAALTLPIDAY--RLTFVDGVFSS 96
Query: 141 SALNLSNLPDGVYV------------------GSLLGV-------------SDGIMKRVS 169
+ ++ +LP V V G L GV +G + R++
Sbjct: 97 ALSDVDSLPSSVQVLPLSKALAENHEAVGGPLGRLTGVDFSPFAALNTAFMEEGAVVRIA 156
Query: 170 -----------DFISEFQCGDLFWS-----INGMGAPDLGVI-YVPAEGNDCYWANSVLE 212
F+S + G S + G + +I + E + N V E
Sbjct: 157 PGTVVEKPILLQFLS--RAGQPVMSHPRVLVEAGGRSEATLIEHYTGESEATNFTNVVGE 214
Query: 213 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 272
+++ +G + H LQ L H+ V Q + Y +S GG L R+++ G
Sbjct: 215 LMLDRGAILAHYKLQEAPLGDMHVASIHVEQSRDTRYTSYNLSLGGGLVRNDLISDLNGQ 274
Query: 273 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYA 332
ET Q D H+++ + P + + +K I+ VF+G V V R +
Sbjct: 275 GAETNFLGLFFGQGRQHVDNHTKVNHNAPLTFSNENYKGIL-DDRAHGVFNGKVYVKRDS 333
Query: 333 QQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLE 392
Q+ + Q ++LLL RA ++ KP L+I ADDVKCSHG L+E ++ + RGID
Sbjct: 334 QKIEGFQSNQNLLLSDRAHIDAKPELEIYADDVKCSHGTTTGQLDEEAIYALRTRGIDEA 393
Query: 393 TARKALVFSFGAEVIERFPYPSIRNQV 419
TAR L +F EV+++ +I +V
Sbjct: 394 TARGLLTLAFAGEVLDKVTLDAIAERV 420
>gi|352101432|ref|ZP_08958738.1| Fe-S cluster assembly protein SufD [Halomonas sp. HAL1]
gi|350600598|gb|EHA16662.1| Fe-S cluster assembly protein SufD [Halomonas sp. HAL1]
Length = 446
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 168/413 (40%), Gaps = 52/413 (12%)
Query: 58 DSLPSSSSSL-PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
D+L + SSS +P + R + + + +P+R+DE +++TD I
Sbjct: 9 DTLKARSSSYTAEPTWIAARRQAGAARFEALGFPTRRDEEWKYTDVRSIAQGNFALADNA 68
Query: 117 SSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYV------------------ 154
S + P L +DG ++ ++ +LP V V
Sbjct: 69 EFSQASAAALTLPIDAYRLTFVDGVFSSALSDVDSLPSSVQVLPLSKALAENHEAVGGPL 128
Query: 155 GSLLGV-------------SDGIMKRVS-----------DFISE----FQCGDLFWSING 186
G L GV +G + R++ F+S C G
Sbjct: 129 GRLTGVDFSPFAALNTAFMEEGAVVRIAPGTVVEKPILLQFLSRAGQPVMCHPRVLVEAG 188
Query: 187 MGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
+ + + E + N V E+++ +G + H LQ L H+ V Q
Sbjct: 189 SRSEATLIEHYTGESEATNFTNVVGELMLDRGAILAHYKLQEAPLGDMHVASIHVEQSRD 248
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 306
+ Y +S GG L R+++ G ET Q D H+++ + P +
Sbjct: 249 TRYTSYNLSLGGALVRNDLISDLNGQGAETNFLGLFFGQGRQHVDNHTKVNHNAPLTFSN 308
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
+ +K I+ VF+G V V R +Q+ + Q ++LLL RA ++ KP L+I ADDVK
Sbjct: 309 ENYKGIL-DDRAHGVFNGKVYVKRDSQKIEGFQSNQNLLLSDRAHIDAKPELEIYADDVK 367
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
CSHG L+E ++ + RGID TAR L +F EV+++ +I +V
Sbjct: 368 CSHGTTTGQLDEEAIYALRTRGIDEATARGLLTLAFAGEVLDKVSLDAIAERV 420
>gi|338737940|ref|YP_004674902.1| FeS assembly protein SufD [Hyphomicrobium sp. MC1]
gi|337758503|emb|CCB64328.1| FeS assembly protein SufD [Hyphomicrobium sp. MC1]
Length = 445
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 120/223 (53%), Gaps = 5/223 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N++ +VV+GKG + H+ + A H+ V + + Y + S G L+R+ ++V
Sbjct: 221 NALTDVVVGKGATLHHAKVAVDEGKALHLSNCDVTLDADATYRSFQFSAGLGLARNGLNV 280
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGN 325
G + +LS +L + + + + + L++DH PR R+L K ++ G+ VF G
Sbjct: 281 IFEGEGGKIDLSGAYL--ARRAEHIDTTLVVDHAVPRCESRELFKGVL-EDHGRGVFQGK 337
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V AQ+TD Q++++L+L A + KP L+I ADDV C HG ++L+ LFY +
Sbjct: 338 IIVRPDAQKTDGKQMSQALMLSEDAEFDSKPELEIYADDVVCGHGTTAAELDPDLLFYCR 397
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+RGI + AR ++ SF E IE+ +R + ++ +G
Sbjct: 398 SRGIPEKEARALMIESFIGEAIEKVENEQLRGALAAYATQWLG 440
>gi|297620331|ref|YP_003708468.1| FeS assembly protein SufD [Waddlia chondrophila WSU 86-1044]
gi|297375632|gb|ADI37462.1| FeS assembly protein SufD [Waddlia chondrophila WSU 86-1044]
gi|337292774|emb|CCB90778.1| UPF0051 protein slr0076 [Waddlia chondrophila 2032/99]
Length = 421
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 122/229 (53%), Gaps = 11/229 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ--ETASGYELVE 253
+V + G+ C N+ E+ I + V Y N + AH + R + S + V
Sbjct: 197 HVFSSGSVC---NASFELSIDENADV-SLYQLNHRMPEAHWQLETTRSFLKRDSRFTAVN 252
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKC 311
++ G + R + G + E LS +L ++ + H+ +L+DH +CR QL K
Sbjct: 253 LTNGSETVRSDYKAVLTGENGEVNLSGLWMLQGNR--EAHTNILIDHQAPHCRSNQLFKG 310
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
++ + ++ F+G + V + AQ+TDA QL +LLL +A KPNL+I ADDVK SHGA
Sbjct: 311 VLDDA-SRSSFEGKIYVRQAAQKTDAFQLNNNLLLSEKANAFSKPNLEIFADDVKASHGA 369
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVV 420
+ L++ QLFY ++RG E A+K ++ F E+I++ +R+++
Sbjct: 370 TVGQLDKEQLFYLKSRGYSQEMAQKTMIKGFYLEIIDQIKDSVVRDEIT 418
>gi|298372247|ref|ZP_06982237.1| ABC transporter [Bacteroidetes oral taxon 274 str. F0058]
gi|298275151|gb|EFI16702.1| ABC transporter [Bacteroidetes oral taxon 274 str. F0058]
Length = 446
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 12/225 (5%)
Query: 200 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
EG D ++A+ V EVV+G G + + L+N + A ++ V Q S +V
Sbjct: 205 EGVD-FFASKVTEVVVGDGARFEYYSLENTTRKANNLMQMFVTQGNNS-----QVIVNNL 258
Query: 260 LSRHNVHVQQLGPDTETELSSFHL---LVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVA 314
L + V Q+ D + E +S L L+SD TQ+ + ++ H P +L K I+
Sbjct: 259 LLLNAVSRNQITADIDGENASLFLGGMLISDGTQEAENNTIIRHNQPNSTSNELFKYILD 318
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
+F G + V + AQ+T + Q +S+ L P A VN +P L+I ADDVKC HGA
Sbjct: 319 ER-SHGIFSGIIVVEKDAQKTLSRQTNKSICLTPEAVVNSRPQLEIYADDVKCGHGATTG 377
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
L+ LFY + RGID +TAR L+ +F +VI+ +R+++
Sbjct: 378 QLDNEALFYMKQRGIDQDTARMMLLSAFVQDVIDEIHIDVLRDKM 422
>gi|261343986|ref|ZP_05971631.1| FeS assembly protein SufD [Providencia rustigianii DSM 4541]
gi|282568377|gb|EFB73912.1| FeS assembly protein SufD [Providencia rustigianii DSM 4541]
Length = 435
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 116/215 (53%), Gaps = 5/215 (2%)
Query: 211 LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQL 270
L V IG ++ H L ++ +A H + S + G L RH+ +
Sbjct: 217 LTVEIGDNAQLSHFKLVTENPSAQHFAHNDMIVGRDSQVKSSSFLLGAGLLRHHTSSRLE 276
Query: 271 GPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 328
G +T+ EL+S L++ T+ +R L+H YC RQLHK I S + VF+G +KV
Sbjct: 277 GENTQFELNS--LVLPQGTEIADTRSYLEHNACYCSSRQLHKVIGMDS-SKTVFNGMIKV 333
Query: 329 NRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARG 388
A +TD +LLL +A ++ KP L+I ADDVKC HGA + +++ QLFY ++RG
Sbjct: 334 APNALKTDGQMTNNTLLLGEKAEIDTKPQLEIYADDVKCGHGATVGRMDDEQLFYLRSRG 393
Query: 389 IDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
I + A++ ++ +F AE+ E +++ V++++
Sbjct: 394 ISHQAAKQMIINAFAAELTESIDIAGLKSAVMANI 428
>gi|405382874|ref|ZP_11036650.1| FeS assembly protein SufD [Rhizobium sp. CF142]
gi|397320635|gb|EJJ25067.1| FeS assembly protein SufD [Rhizobium sp. CF142]
Length = 424
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 177/391 (45%), Gaps = 37/391 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPI 113
+L ++ LP + LRD L P+R+ E + +TD +++++ +Q
Sbjct: 15 ALIEAFNEKIGELPGNGAVTALRDRLLDDLKREGLPTRRVEAWHYTDLKNLLRNIPVQAG 74
Query: 114 TRPSSSLDVSTDAQFPSLVLIDG--FIQNSALNLS------NLPDGVYVGSL--LGVSDG 163
S +L+ D P L +I G + SA +L+ L DG +L LG D
Sbjct: 75 DAGSEALEPLVDGS-PVLAVIQGKPVHKASAGDLAVAVYSEKLTDGSAAANLDALGRDDA 133
Query: 164 IMKRVSDFI-----------SEFQ----------CGDLFWSI-NGMGAPDLGVIYVPAEG 201
+ + F+ +EF+ GD+ + GA GV+ +
Sbjct: 134 VGRINGSFVKDGYVVDVPDGTEFEEPLEIQFVHAGGDIHTRLPVSFGANVKGVVIERHQS 193
Query: 202 --NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 259
++ + V ++ +G+G ++ LQ Q H+ V + +L ++ GGK
Sbjct: 194 VTDNAALVSHVSDITVGQGTELTWIILQQQGAEDTHLGQIRVDLGADAKLKLFVINAGGK 253
Query: 260 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 319
L R ++++ G + L +LL ++ D+ L D P ++ + +V +
Sbjct: 254 LVRQELNIKVTGEGADLTLRGINLLGAETHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAR 312
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
VF G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ +
Sbjct: 313 GVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVADIDHN 372
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERF 410
L+Y ARGI AR LV +F AE++E
Sbjct: 373 HLYYLMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|254419884|ref|ZP_05033608.1| sufB/sufD domain protein [Brevundimonas sp. BAL3]
gi|196186061|gb|EDX81037.1| sufB/sufD domain protein [Brevundimonas sp. BAL3]
Length = 340
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 146/340 (42%), Gaps = 29/340 (8%)
Query: 86 STPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNL 145
+ +PSR+DE ++++D ++ PS + V F +L A+
Sbjct: 12 AATFPSRRDEAWKYSDLK----RHLREAPTPSGTAAVGAPGPFYAL-------GGEAIVF 60
Query: 146 SNLPDGVYVGSLLGVSDGI--------MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
+N G +GV+D I ++ +S+ + ++ GA L ++
Sbjct: 61 AN-------GRPVGVTDFIASGEQTLRLRYISNAVGTGHTARARVAVRA-GAKLL-LLET 111
Query: 198 PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
Y A++ LE+ + G +V L + +A I V+ E Y ++TG
Sbjct: 112 HEGAGSAYVAHNTLELDVAAGAEVTRVVLVEEPEDAISIAEAHVKVEAGGVYRQTIIATG 171
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 317
KL R + + + +LL + DL S + G QL K VA
Sbjct: 172 AKLQRIETRIAHFAQGAQVQADGLYLLNGSRQADLTSVVRHMERDGATSQLIKG-VARDT 230
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
+ VF G + V R A TDA +L+ RA ++ KP L I ADDV+C+HG + L+
Sbjct: 231 ARGVFQGKIVVERGADGTDARMGHHALIASERAEIDAKPELIIYADDVQCAHGNTVGALD 290
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
ES LFY Q RGI E AR L +F EVI+R + R
Sbjct: 291 ESALFYMQQRGIPAEEARALLTQAFLIEVIDRIEHEGARE 330
>gi|424887762|ref|ZP_18311365.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393173311|gb|EJC73355.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 424
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 161/399 (40%), Gaps = 73/399 (18%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
LP + LRD L P+R+ E + +TD + T P D +
Sbjct: 25 GDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TLPPQVGDAGS 78
Query: 125 DAQFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVS-------DGIMKRVSDFI 172
+A P L+DG IQ A N DG LGVS DG +D +
Sbjct: 79 NALEP---LVDGSAVLAVIQGHA-NQKAAADG------LGVSAYSEHLLDG---SAADGL 125
Query: 173 SEFQCGDLFWSINGMGAPDLGVIYVPAEG------------------------------- 201
D ING D V+ VPA+
Sbjct: 126 DALGSDDAVGRINGSFVRDGYVVDVPADTELDAPLEIQFVHAGGQAHTRLPVTFGAGVKA 185
Query: 202 ----------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
D + V ++ +G+G ++ LQ Q + H+ + + L
Sbjct: 186 TVIERHLAVTGDAALVSHVSDIAVGEGAELTWIILQQQGADDTHLGQIRIDLGVNAKLRL 245
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 311
++ GGKL R +H++ G + L +LL ++ D+ L D P ++ +
Sbjct: 246 FVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTGSTEVIRN 305
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
+V + VF G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA
Sbjct: 306 VV-FDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGA 364
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
++D++ + L+Y ARGI AR LV +F AE++E
Sbjct: 365 TVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|153009583|ref|YP_001370798.1| FeS assembly protein SufD [Ochrobactrum anthropi ATCC 49188]
gi|151561471|gb|ABS14969.1| FeS assembly protein SufD [Ochrobactrum anthropi ATCC 49188]
Length = 425
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 184/413 (44%), Gaps = 45/413 (10%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS------ 107
+L DS LP + RD++ +TL PSR+ E + +TD +++K
Sbjct: 18 ALIDSFADRMGDLPGNGDVVVARDAALETLKENGIPSRRVESWHYTDFRTLLKGVAPFDA 77
Query: 108 ---SQIQPITRPSSSLDVSTD-----AQFPSLV--------LIDGFIQNSALNLSNLPDG 151
+Q P SS+ +++ A+ P V L DG + + L D
Sbjct: 78 AAGTQALPALIAGSSIAATSNGVALAAKAPEGVSLTPVREALADGSLV-TQLRSRGFDDT 136
Query: 152 VYVGSLLGVSDGIMKRVSD---FISEFQCGDLFWSING-------MGAPDLGVIYVPAEG 201
+ + VSDG M ++D + + ++ + G +GA G I G
Sbjct: 137 IGQINAAYVSDGWMVSIADDTELEAPLELQNIQKAGQGHTRFPVRIGANVKGTIVERQNG 196
Query: 202 NDC-YWANSVLEVVIGKGGKVRHSYLQN--QSLNAAHIKWTAVRQETASGYELVEVSTGG 258
+ ++ SV V +G G ++ L++ Q+ + T + S L V+ GG
Sbjct: 197 GEGDAFSTSVNHVTVGDGAEILWIILRDFGQATQLSQFNATIGK---GSKLTLYIVNAGG 253
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQLHKCIVAHS 316
KL R VHV G D++ EL +LL D D+ + L+++ R Q+ + +V
Sbjct: 254 KLVRQEVHVNVTGEDSDFELRGLNLLADDTHTDVTMTVGHLVENTR--STQIIRNVV-KD 310
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
+ VF G ++V + AQ+TDA +LLL + KP L+I ADDV C HGA +++L
Sbjct: 311 RARGVFQGMIRVAQIAQKTDARMACNTLLLSDDGEFDAKPELEIFADDVACGHGATVAEL 370
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
LFY ARGI AR L+ +F AE+IE ++ + + N + T
Sbjct: 371 SRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEEVLSNWLAT 423
>gi|148257191|ref|YP_001241776.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. BTAi1]
gi|146409364|gb|ABQ37870.1| Iron-regulated ABC transporter permease protein SufD
[Bradyrhizobium sp. BTAi1]
Length = 441
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 5/226 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y N+ L++V+G ++ H + + A HI + + + GG L R+
Sbjct: 216 YQVNTALQLVVGDEARIDHVKVVTEGNGALHISSLLANIGARATFNQLGFVAGGSLVRNQ 275
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
+ V G T ++ LL Q D + L ++H C R+ K +V + +AVF
Sbjct: 276 LFVHIAGEGTVADIRGGSLLAGAQHAD--TTLAIEHAAENCQSRETFKAVVGDT-ARAVF 332
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V+ AQ+TDA ++R+LLL A + KP L+I ADDV+C HG +++ LF
Sbjct: 333 QGKITVSPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAIDDELLF 392
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Y ARGI + A+ L+ +F E+IE S+R + + +G
Sbjct: 393 YLMARGIPPDEAKALLIQAFIGEIIEGAANESVRAALTEAMLGWLG 438
>gi|170743212|ref|YP_001771867.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
gi|168197486|gb|ACA19433.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
Length = 439
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 200 EGNDC--YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
EG D Y N L+ V+G G +RH+ L + A + +V+ S E V V+TG
Sbjct: 207 EGPDGVGYQPNDALDAVVGDGATLRHARLNREGGGAVALSTLSVKLGAKSHLETVNVATG 266
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAH 315
+RH + + G + +++ +L Q D S LL DH P G R+ K ++
Sbjct: 267 AAFARHQIFLLFAGAEATAQVNGATMLKDGQLGD--STLLADHAAPGGISREQFKTVIDG 324
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
VF G + V + AQ+TD + LLL + KP L+I ADDV C HGA
Sbjct: 325 D-ATGVFQGKIIVAQVAQKTDGKMKSDCLLLSDEGQMMNKPELEIFADDVACGHGATCGA 383
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
+E LFY ARG+ A ++ +F E IE + R +++ V+
Sbjct: 384 PDEDLLFYLMARGLPRAEAEGLMIQAFLGEAIEAVTHEGARAAMIAAVET 433
>gi|410663514|ref|YP_006915885.1| FeS assembly protein SufD [Simiduia agarivorans SA1 = DSM 21679]
gi|409025871|gb|AFU98155.1| FeS assembly protein SufD [Simiduia agarivorans SA1 = DSM 21679]
Length = 408
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 159/383 (41%), Gaps = 50/383 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
LQ R + + L WP RK E +R+T ++ S T P+ + + +V
Sbjct: 18 LQVQRARAREALSVARWPGRKVEDWRYTPVRALEKSAFVQATLPAEPAPAIGNLETLDIV 77
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD- 191
L DG + LP+GV + L SD K VS F S LF +N + A
Sbjct: 78 LRDGM----PILPEGLPEGVSIAFL---SDA--KAVSLFGSVKPERHLFGLVNDLLATTG 128
Query: 192 --------------LGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 237
L V+Y EG V + + HS +S A+ +
Sbjct: 129 VYIEVAAGVEVERPLRVVYQAGEGEQVQQRVLVKLAAGARATVIEHSESAVESFTCAYAE 188
Query: 238 WTAVRQETASGYELV-------------------------EVSTGGKLSRHNVHVQQLGP 272
+ Y V V G LSR +V V G
Sbjct: 189 YLLEESAHLEHYRFVLNGGAALHIGGCHFSLAGKSELNSTLVGFGSDLSRLDVDVIHAGQ 248
Query: 273 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYA 332
+++ +LL + DLH+ + P G + + IVA +AVF+G + ++R A
Sbjct: 249 FATAAMNAIYLLDGSELFDLHTTIEHASPNGTTEENVRGIVADK-ARAVFNGRIHIHRDA 307
Query: 333 QQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLE 392
Q+T A R+LLL A VN KP L+I ADDV+C+HGA I++ ++ L+Y Q+RGI
Sbjct: 308 QKTLAELNNRNLLLSEGAEVNTKPELEIYADDVRCAHGATIAETDKQALYYLQSRGISKA 367
Query: 393 TARKALVFSFGAEVIERFPYPSI 415
A+ L F F E+++ P ++
Sbjct: 368 QAQIMLNFGFINELVDAMPNAAL 390
>gi|404320392|ref|ZP_10968325.1| FeS assembly protein SufD [Ochrobactrum anthropi CTS-325]
Length = 425
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 59/420 (14%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L DS LP + RD++ +TL PSR+ E + +TD + +
Sbjct: 18 ALIDSFADRMGDLPGNGDVVVARDAALETLKENGIPSRRVESWHYTD--------FRTLL 69
Query: 115 RPSSSLDVSTDAQ-FPSLVLIDGF--IQNSALNLSNLPDGVYV---------GSLLG--- 159
+ + D +T Q P+L+ N + P+GV + GSL+
Sbjct: 70 KGVAPFDAATGTQALPALIAGSSIAATSNGVALAAKAPEGVSLTPVREALADGSLVTQLR 129
Query: 160 ---------------VSDGIMKRV---SDFISEFQCGDLFWSING-------MGAPDLGV 194
VSDG M + ++ + + ++ + G +GA G
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIAEDTELEAPLELQNIQKAGQGHTRFPVRIGANVKGT 189
Query: 195 IYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQN--QSLNAAHIKWTAVRQETASGYEL 251
I G + ++ SV V +G G ++ L++ Q+ + T + S L
Sbjct: 190 IVERQNGGEGDAFSTSVNHVTVGDGAEILWIILRDFGQATQLSQFNATIGK---GSKLTL 246
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQLH 309
V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R Q+
Sbjct: 247 YIVNAGGKLVRQEVHVNVTGEDSDFELRGLNLLADDTHTDVTMTVGHLVENTR--STQII 304
Query: 310 KCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
+ +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C H
Sbjct: 305 RNVV-KDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGH 363
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
GA +++L LFY ARGI AR L+ +F AE+IE ++ + + N + T
Sbjct: 364 GATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEEVLSNWLAT 423
>gi|244539254|dbj|BAH83297.1| component of SufBCD complex [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 428
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 213 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 272
+ +G ++ H L ++ + H + S + G KL RHN Q
Sbjct: 208 ISLGNNTRLTHIKLVCENSESYHFAHNDIILAHKSQASTISFFIGAKLLRHNTSAQLNDK 267
Query: 273 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 330
E +++ L ++ + D SR ++H +GYC QLHK I + +++F+G +KV++
Sbjct: 268 SAELIINTLSLPINKEIHD--SRSYVEHNKGYCSSYQLHKTITCNQ-ARSIFNGIIKVSK 324
Query: 331 YAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGID 390
+A +TD+ L +LL+ A V KP L+I ADD+KCSHGA + +E Q+FY +ARGI
Sbjct: 325 HALKTDSKMLNNNLLIGTLAAVYTKPQLEIYADDIKCSHGATVGHIEYEQIFYLRARGIS 384
Query: 391 LETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
A+ +++ F ++ IR V+ +
Sbjct: 385 ESFAKNIIIYGFIEDLTGMLKNNIIRKLVLERI 417
>gi|116252325|ref|YP_768163.1| iron-sulfur cluster assembly protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256973|emb|CAK08067.1| putative iron-sulfur cluster assembly protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 442
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 178/424 (41%), Gaps = 39/424 (9%)
Query: 22 PKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSS 81
P A+ + RV T+ T S + A L ++ LP + LRD
Sbjct: 2 PTSSARRPEFRVERTTSMNMQTTSRLTAAETA--LIEAFNQQIGELPGNGAVTALRDRLL 59
Query: 82 QTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQN 140
L P+R+ E + +TD +++++ Q S +L+ D L +I G
Sbjct: 60 DDLKKAGLPTRRIEAWHYTDLKNLLRTVPQQAGDAGSQALEPLVD-DATVLAVIQGHSNQ 118
Query: 141 SA----LNLS----NLPDGVYVGSL--LGVSDGIMKRVSDFISEFQCGDL---------- 180
A L +S L DG G L LG D + + F+ + D+
Sbjct: 119 KATVDGLGVSAYSERLLDGSAAGGLDALGSDDAVGRINGSFVRDGYVVDVPADTELETPL 178
Query: 181 ---FWSINGMGAPDL------GVIYVPAE-----GNDCYWANSVLEVVIGKGGKVRHSYL 226
F G L GV E D + V ++ +G+G ++ L
Sbjct: 179 EIQFIHAGGQTHTRLPVSFGAGVKATVIERHLTVTGDAALVSHVSDITVGEGTELTWIIL 238
Query: 227 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 286
Q Q + H+ + + L ++ GGKL R +H++ G + L +LL +
Sbjct: 239 QQQGADDTHLGQIRIDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGA 298
Query: 287 DQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLL 346
+ D+ L D P ++ + +V + VF G ++V AQ+TDA +LL+
Sbjct: 299 ESHTDVTMVLGHDVPNTGSTEVIRNVV-FDRAKGVFQGMIRVAPDAQKTDAKMACNTLLM 357
Query: 347 EPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEV 406
A +VKP L+I ADDV+C HGA ++D++ + L+Y ARGI AR LV +F AE+
Sbjct: 358 SDDAEFSVKPELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEI 417
Query: 407 IERF 410
+E
Sbjct: 418 VEEL 421
>gi|87118502|ref|ZP_01074401.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
gi|86166136|gb|EAQ67402.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
Length = 420
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 173/389 (44%), Gaps = 67/389 (17%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDG 136
RD + L WP+RK E +++T ++P+ + S + S ++ SL IDG
Sbjct: 23 RDLALSALADVRWPTRKTEAWKYT--------SLRPVEKFSKTAPASF-SKASSLTQIDG 73
Query: 137 F------IQN----SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFW 182
F +N + L LP+G+ S+ S + +D +S+F +F
Sbjct: 74 FECLDLVFENGQFVTDLAELTLPEGL---SIQLASQADSAKQADVLSKFSSIKPERHVFG 130
Query: 183 SINGMGAPDLGVIYV-------PA---------------------------------EGN 202
+N D+ VI V PA +GN
Sbjct: 131 LLNDALVQDVLVIEVADNVSVAPALRLTSILSLAAQAHTRVLVVLGEHAKLTVSEHYQGN 190
Query: 203 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
+ +E IG ++ H Q+ A + + + + V G LSR
Sbjct: 191 EESLNTGFVEYEIGADARLEHYRFALQTGKAVSLGGSHFQLAERADLNSTLVGFGSDLSR 250
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 322
+V + G + ++++F+LL + DLH+ + P G + + I+A +AVF
Sbjct: 251 VDVDMVHAGENAFAKMNAFYLLDGKELFDLHATVEHAVPHGTTEE-NIRIIAADQAKAVF 309
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G + ++R AQ+T A R+LL+ +A +N KP L+I ADDV+C+HGA ++++++ L+
Sbjct: 310 NGRIHIHRDAQKTLAELNNRNLLMSNKAEINTKPELEIYADDVRCAHGATVAEIDKKALY 369
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFP 411
Y Q+RGI A+ L F F E+I++ P
Sbjct: 370 YMQSRGISRAKAQVMLNFGFINELIDQMP 398
>gi|409437499|ref|ZP_11264613.1| putative iron-sulfur cluster assembly protein [Rhizobium
mesoamericanum STM3625]
gi|408750927|emb|CCM75771.1| putative iron-sulfur cluster assembly protein [Rhizobium
mesoamericanum STM3625]
Length = 424
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 185/422 (43%), Gaps = 53/422 (12%)
Query: 33 VSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSR 92
+++QTT Q T ++ +I+ + LP S + +RD L P+R
Sbjct: 1 MNMQTTSRQ-TAAEAALIEAFNNQIGELPGDGSVIA-------IRDRLLDDLKRAGLPTR 52
Query: 93 KDEPFRFTDTSMI-----------KSSQIQPITRPSSSLDVSTDAQFPSL-VLIDGF-IQ 139
+ E + +TD + S P+ SS L V P L +DG I
Sbjct: 53 RIEAWHYTDLKTLLRAIPAQAGDAGSEARDPLVEQSSVLSVIQ--GVPDLRASVDGLDIS 110
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA 199
+ A LSN +G+L G D I + F+ + D+ + + AP + + +V A
Sbjct: 111 DYAALLSNGTAATSLGAL-GSDDAIGRINGSFVRDGYVIDVPAGAD-LEAP-VEIQFVHA 167
Query: 200 EG--------------------------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 233
G +D + V ++ +G+G ++ +Q Q +
Sbjct: 168 GGQTHTRLPVNFGANVKATVIERHLAVTSDAALVSHVSDITVGEGSELTWIIIQQQGADD 227
Query: 234 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 293
H+ + + +L ++ GGKL R +H++ G + L +LL ++ D+
Sbjct: 228 THLGQIRIDLGADAKLKLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAETHTDVT 287
Query: 294 SRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
L + P ++ + +V + VF G ++V AQ+TDA +LL+ A +
Sbjct: 288 MVLGHNVPHTGSTEVIRNVV-FDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFS 346
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYP 413
VKP L+I ADDV+C HGA ++D++++ L+Y ARGI AR LV +F AE++E
Sbjct: 347 VKPELEIFADDVQCGHGATVADIDDNHLYYMMARGIPRAKARAMLVNAFVAEIVEELEDE 406
Query: 414 SI 415
S+
Sbjct: 407 SL 408
>gi|393769168|ref|ZP_10357696.1| FeS assembly protein SufD [Methylobacterium sp. GXF4]
gi|392725409|gb|EIZ82746.1| FeS assembly protein SufD [Methylobacterium sp. GXF4]
Length = 440
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 161/403 (39%), Gaps = 58/403 (14%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVSTDAQFPSL-- 131
R+ + + + PSR+ E F++TD + P PS + V++ F L
Sbjct: 34 REEAFRFFEAAGLPSRRVEAFKYTDLRAAMKEAVPPAEAPSPEVAQAAVASAKGFAGLDA 93
Query: 132 ---VLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISE-----FQCGDL 180
++G + +L LP G+ V L +G D ++ ++ FQ
Sbjct: 94 ARLTFVNGHLIRPLSDLDGLPAGLTVTPLNDAMGKGDARLRLLAPVEQARENPVFQLNTA 153
Query: 181 FWS--------------------INGMGAP----------DLGV-----IYVPAEGND-- 203
F + G G+ DLG + EG D
Sbjct: 154 FLADGALISVAPGTKIERALHLRFVGTGSEGFSTATRVLVDLGAGAELTLLESHEGPDDI 213
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y N L+V +GK RH+ L + A + +VR + + E V + TG LSRH
Sbjct: 214 TYQPNDALDVRVGKQAVFRHARLNREGKAAIALSTISVRLDDEARLETVNLVTGAVLSRH 273
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKCIVAHSLGQAV 321
+ + G + ++ +L Q D S LL DH G R++ K ++ V
Sbjct: 274 QIFMHVAGENVNAVVNGAAMLGDGQLAD--STLLADHAAVGGVGREMFKTVIDGD-ATGV 330
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V + AQQTD + LLL + KP L+I ADDV C HGA +E L
Sbjct: 331 FQGKIIVRQAAQQTDGKMKSDCLLLSDEGQMMNKPELEIFADDVACGHGATCGAPDEDLL 390
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
FY ARG+ A LV +F E +E + R ++ ++
Sbjct: 391 FYLMARGLPRAVAESLLVQAFIGEAVESVSHEGARAALIGEIE 433
>gi|421588792|ref|ZP_16034033.1| FeS assembly protein SufD [Rhizobium sp. Pop5]
gi|403706434|gb|EJZ21697.1| FeS assembly protein SufD [Rhizobium sp. Pop5]
Length = 424
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 1/209 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + + V ++ +G+G ++ LQ Q H+ V + L ++ GGK+
Sbjct: 196 GDAAFVSHVSDITVGEGTELTWIILQQQGAEDTHLGQIRVDLGADAKLRLFVINAGGKMV 255
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +H++ G + L +LL ++ D+ L D P ++ + +V + V
Sbjct: 256 RQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGV 314
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L
Sbjct: 315 FQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHL 374
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERF 410
+Y ARGI AR LV +F AE++E
Sbjct: 375 YYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|410862378|ref|YP_006977612.1| cysteine desulfurase activator SufB [Alteromonas macleodii AltDE1]
gi|410819640|gb|AFV86257.1| cysteine desulfurase activator SufB [Alteromonas macleodii AltDE1]
Length = 418
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
V G +LSR +V + G + ++++ +LL + DLHS + P G + + IV
Sbjct: 240 VGYGSELSRLDVDIHHAGEFADAKMNAVYLLAEGELFDLHSTIEHAMPNGTTEENARGIV 299
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+AVF+G + ++R AQ+T A R+LLL R +N KP L+I ADDVKC+HGA +
Sbjct: 300 GDK-ARAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVKCAHGATV 358
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+++EE L+Y RGI A L F F E+I P +IR
Sbjct: 359 AEIEEEALYYMLTRGIARSKALVMLNFGFIQELINDVPNGAIR 401
>gi|437256047|ref|ZP_20715739.1| cysteine desulfurase activator complex subunit SufD, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|435155636|gb|ELN42168.1| cysteine desulfurase activator complex subunit SufD, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
Length = 138
Score = 110 bits (276), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
Query: 298 LDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVK 355
L+H +GYC RQ HK IV+ G+AVF+G + V ++A +TD +LLL A V+ K
Sbjct: 3 LEHNKGYCNSRQSHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTK 61
Query: 356 PNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
P L+I ADDVKCSHGA I +++ Q+FY Q+RGI + AR ++++F AE+ E ++
Sbjct: 62 PQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSAL 121
Query: 416 RNQVVSHV 423
+ QV++ +
Sbjct: 122 KQQVLARI 129
>gi|367472260|ref|ZP_09471843.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
gi|365275344|emb|CCD84311.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
Length = 441
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y N+ +++V+G ++ H + ++ +A HI + + + GG L R+
Sbjct: 216 YQVNTAMQLVVGDEARIDHVKVVSEGSSALHIGSLLANIGARATFNQLGFVAGGSLVRNQ 275
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP--RGYCRQLHKCIVAHSLGQAVF 322
+ V+ G T ++ LL Q D + L ++H G R+ K +V + +AVF
Sbjct: 276 LFVRMAGEGTVADIRGGSLLSGTQHAD--TTLSIEHAAENGQSRETFKAVVGDT-ARAVF 332
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V AQ+TDA ++R+LLL A + KP L+I ADDV+C HG +++ LF
Sbjct: 333 QGKITVAPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAIDDELLF 392
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Y ARGI A+ L+ +F E+IE S+R+ + + +G
Sbjct: 393 YLMARGIPPAEAKALLIQAFIGEIIEGAANESVRDALTGALLGWLG 438
>gi|313204300|ref|YP_004042957.1| fes assembly protein sufd [Paludibacter propionicigenes WB4]
gi|312443616|gb|ADQ79972.1| FeS assembly protein SufD [Paludibacter propionicigenes WB4]
Length = 466
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 164/398 (41%), Gaps = 56/398 (14%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDT----SMIKSSQIQPITRPSS-----SLDVSTDAQ 127
RD+S +P+ E ++++D S+ I I P + DV
Sbjct: 48 RDASFALFEELRFPTTALEDYKYSDLKAALSIDYGLNINRIPIPVNPYDAFKCDVPGIQS 107
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC--GDLFWSIN 185
+ V+ D F LP+GV +GSL +++ + + ++ + D + N
Sbjct: 108 YLFFVVNDAFYPTMDPKALKLPEGVIIGSLKEIAETRPELLKEYYGKLSTPKKDGLVAFN 167
Query: 186 GMGAPDLGVIYVPA-------------------------------EGNDC---------- 204
G A D +YVP EG
Sbjct: 168 GAFAQDGFFMYVPKNVQLTKPVQLVNIMRSDVDFMANSHNLIILEEGAKAQLLVCDHTVD 227
Query: 205 ---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
+ +N V EV +G+ H L+N ++ + Q +S ++ ++
Sbjct: 228 EVRFLSNRVTEVFVGEHATYEHYKLENTHTKTTNLSTLLIDQRASSNVIANVITLHNGVT 287
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R+ V + G ET+L + +Q D + ++ + P +L K V +
Sbjct: 288 RNTVEIDLDGEHCETQLCGMVIGDKNQQVDNFTSIIHNKPNCNSHELFK-YVLDDFAKGG 346
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V + AQ+T A Q R++LL A + KP L+I ADDVKCSHGA I L+E+
Sbjct: 347 FTGKLLVAKDAQKTAAFQTNRNILLNKTAKMRTKPQLEIYADDVKCSHGATIGSLDETAK 406
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
FY Q+RGI AR L+F+F +VIE P++++++
Sbjct: 407 FYMQSRGISEPEARLLLMFAFTNDVIEFIRIPALQDRI 444
>gi|407700820|ref|YP_006825607.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Black Sea 11']
gi|407249967|gb|AFT79152.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Black Sea 11']
Length = 418
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
V G +LSR +V + G + ++++ +LL + DLHS + P G + + IV
Sbjct: 240 VGYGSELSRLDVDIHHAGEFADAKMNAIYLLAEGELFDLHSTIEHAMPNGTTEENARGIV 299
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+AVF+G + ++R AQ+T A R+LLL R +N KP L+I ADDVKC+HGA +
Sbjct: 300 GDK-ARAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVKCAHGATV 358
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+++EE L+Y RG+ A L F F E+I P ++R
Sbjct: 359 AEIEEEALYYMLTRGVSRSKALVMLNFGFIQELINDVPNAAVR 401
>gi|424895175|ref|ZP_18318749.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393179402|gb|EJC79441.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 424
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + V ++ +G+G ++ LQ Q + H+ + + L ++ GG+L
Sbjct: 196 GDAALVSHVSDITVGEGAELTWIILQQQGGDDTHLGQIRIDLGANAKLRLFVINAGGRLV 255
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +H++ G + L +LL D D+ L D P ++ + +V + V
Sbjct: 256 RQELHIKVTGEGADLTLRGINLLGGDSHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGV 314
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L
Sbjct: 315 FQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHL 374
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERF 410
+Y ARGI AR LV +F AE++E
Sbjct: 375 YYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|424870814|ref|ZP_18294476.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393166515|gb|EJC66562.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 424
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 1/209 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + V ++ +G+G ++ LQ Q + H+ + + L ++ GGKL
Sbjct: 196 GDAALVSHVSDITVGEGTELTWIILQQQGADDTHLGQIRIDLGADAKLRLFVINAGGKLV 255
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +H++ G + L +LL ++ D+ L D P ++ + +V + V
Sbjct: 256 RQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPNTGSTEVIRNVV-FDRAKGV 314
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L
Sbjct: 315 FQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHL 374
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERF 410
+Y ARGI AR LV +F AE++E
Sbjct: 375 YYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|218679563|ref|ZP_03527460.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 894]
Length = 264
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + + ++ IGKG ++ LQ Q H+ + + L ++ GGKL
Sbjct: 36 GDAALVSHISDISIGKGAELTWIILQQQGAEDTHLGQIRIDLGADAKLRLFVINAGGKLV 95
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +H++ G + L +LL ++ D+ L D P ++ + +V + V
Sbjct: 96 RQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGV 154
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L
Sbjct: 155 FQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHL 214
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERF 410
+Y ARGI AR LV +F AE++E
Sbjct: 215 YYLMARGIPENKARAMLVNAFVAEIVEEL 243
>gi|383642117|ref|ZP_09954523.1| SufBD protein [Sphingomonas elodea ATCC 31461]
Length = 360
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 6/214 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV--STGGKLSRH 263
WAN + + +GKG ++ S Q+ I+ A E AS LV + GG SR
Sbjct: 137 WANRLTAIALGKGARLMRSVRLVQTGGFVSIRDEAEIGEAAS---LVSIFLGAGGMGSRI 193
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 323
+ + G E+ L Q Q+ + + G RQ+ + + A A
Sbjct: 194 DGALTLTGKGAFAEMGGALLTSGTQRQEAAVAVRHEQIEGTSRQIWRAVAADQ-SVASLA 252
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
V+V R AQQTD Q R LLL+ ATVN+KP L+I ADDVKC+HGA + +L+ + LFY
Sbjct: 253 ARVEVARGAQQTDGEQSLRGLLLQRSATVNLKPELEIFADDVKCAHGATVGELDRNALFY 312
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
Q+RGI+ A+ L +F A+ + R +R
Sbjct: 313 LQSRGIEESQAKALLTHAFVADALARIGEAPVRE 346
>gi|374287999|ref|YP_005035084.1| hypothetical protein BMS_1241 [Bacteriovorax marinus SJ]
gi|301166540|emb|CBW26116.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 417
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y SV + G +H +Q + A H + + ++ +TG +RHN
Sbjct: 184 YNQVSVTNFTLKDGAIAKHIKVQTEGNLAFHAGSVNATLKRDANFKSFTFNTGAIKARHN 243
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
+ V+ L P E + + L Q D S + D QL K ++ S + VF G
Sbjct: 244 LQVKLLEPGAEASVDGLYTLAGKQHCDNFSLIHHDAEHTDSSQLFKGVLDES-ARGVFTG 302
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
V V+R AQ+ ++ QL ++LLL +A V+ +P L++ ADDVKC+HGA + + + + FY
Sbjct: 303 KVLVDRDAQKVNSEQLNKNLLLTKKAHVDTRPQLEVYADDVKCAHGATVGQMSDEEAFYL 362
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
Q+RG+ E A+K L+ +F A+ I + I N
Sbjct: 363 QSRGLSKERAQKLLIHAFCADAILKIEDTQIEN 395
>gi|298291336|ref|YP_003693275.1| FeS assembly protein SufD [Starkeya novella DSM 506]
gi|296927847|gb|ADH88656.1| FeS assembly protein SufD [Starkeya novella DSM 506]
Length = 437
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 111/223 (49%), Gaps = 5/223 (2%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y ANSV E V+G + LQ + +A H+ + +TG ++R
Sbjct: 211 AYQANSVTEFVVGDEAHLDVVRLQQEGGSAFHLSTILFDVGRHAQVHAFTFATGASVART 270
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 321
+++ G + + LL Q D S L +DH C R+L K ++ S + V
Sbjct: 271 SLYATLSGDASHVSFNGAALLKGRQHSD--STLFVDHQVPGCESRELFKTVLDDS-SRGV 327
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V + AQ+TD ++R+LLL A ++ KP L+I ADDV C HGA D++E L
Sbjct: 328 FQGKIVVRQAAQKTDGRMMSRALLLGEDAEMDNKPELEIFADDVACGHGATCGDIDEELL 387
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
FY +ARGI L+ A+ LV +F E IE + +R +V +
Sbjct: 388 FYLRARGIPLKEAQSLLVQAFVGEAIETVKHDGLREALVEQAE 430
>gi|332141973|ref|YP_004427711.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
gi|327551995|gb|AEA98713.1| Cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
Length = 418
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
V G +LSR +V + G + ++++ +LL + DLHS + P G + + IV
Sbjct: 240 VGYGSELSRLDVDIHHAGEFADAKMNAVYLLAEGELFDLHSTIEHAMPNGTTEENARGIV 299
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+AVF+G + ++R AQ+T A R+LLL R +N KP L+I ADDVKC+HGA +
Sbjct: 300 GDK-ARAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVKCAHGATV 358
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+++EE L+Y RGI A L F F E+I P +IR
Sbjct: 359 AEIEEEALYYMLTRGIPRSKALVMLNFGFIQELINDVPNGAIR 401
>gi|222148791|ref|YP_002549748.1| transport system [Agrobacterium vitis S4]
gi|221735777|gb|ACM36740.1| transport system [Agrobacterium vitis S4]
Length = 424
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 176/406 (43%), Gaps = 47/406 (11%)
Query: 31 IRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWP 90
I+ + ++T +A + + QL + LP + RD L P
Sbjct: 3 IQAANRSTAAEAALVEAYTAQLGD------------LPGDGAVLGARDILFDDLKRAGLP 50
Query: 91 SRKDEPFRFTD-----------TSMIKSSQIQPITRPSSSLDV----STDAQFPSLVLID 135
+R+ E + +TD ++ S + P+ + ++ S D P V +
Sbjct: 51 TRRVEAWHYTDLKTLLRAIPDAATLTPSKAVAPLVEAARIFELRQGLSRDVSAPDGVKVH 110
Query: 136 GFIQN-----SALNLSNLPDGVYVGSLLG--VSDGIMKRVSDFIS--------EFQCG-- 178
+ ++ +A +L +G + G V DG V D + +Q G
Sbjct: 111 AYSESLLDGTAAADLVAFSKDDTIGRINGSFVRDGYRLSVEDNVEVDRLIELQAYQGGGQ 170
Query: 179 --DLFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 236
F + G G+ + G +SV ++ +G+G +V +Q Q L H+
Sbjct: 171 SHSRFVASFGSGSKATVIERHRNSGETAGLISSVSDLDLGEGAEVTWIIVQTQGLADTHL 230
Query: 237 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 296
V T + +L ++ GGKL R +HV+ G ++ L + +LL + D+ L
Sbjct: 231 GQIKVVLGTNAKLKLFVINAGGKLVRQEIHVRTAGEGSDFTLRAVNLLGGESHTDVTMTL 290
Query: 297 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
D P ++ + +V + VF G ++V AQ+TDA +LL+ A +VKP
Sbjct: 291 GHDVPNTTSTEVIRNVV-FDRARGVFQGQIRVAPDAQKTDARMACNTLLMSDDAEYSVKP 349
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSF 402
L+I ADDV+C+HGA ++D++ + L+Y ARGI + AR L+ +F
Sbjct: 350 ELEIFADDVQCAHGATVADIDHNHLYYLMARGIPQKVARGLLIKAF 395
>gi|209549491|ref|YP_002281408.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535247|gb|ACI55182.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 424
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 160/399 (40%), Gaps = 73/399 (18%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
LP + LRD L P+R+ E + +TD + T P D +
Sbjct: 25 GDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TLPPQVGDAGS 78
Query: 125 DAQFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVS-------DGIMKRVSDFI 172
DA P L+DG IQ A + DG LGVS DG +D +
Sbjct: 79 DALEP---LVDGSTVLAVIQGHA-SQKAAADG------LGVSAYSEHLLDG---SAADGL 125
Query: 173 SEFQCGDLFWSINGMGAPDLGVIYVPAEG------------------------------- 201
D ING D V+ VPA+
Sbjct: 126 DALGSDDAVGRINGSFVRDGYVVDVPADTELDAPLEIQFVHAGGQTHTRLPVAFASGVKA 185
Query: 202 ----------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
D + V ++ +G+G ++ LQ + H+ + + L
Sbjct: 186 TVIERHLAVTGDPALVSHVSDITVGEGAELTWIILQQHGVEDTHLGQIRIDLGADAKLRL 245
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 311
++ GGKL R +H++ G + L +LL +D D+ L D P ++ +
Sbjct: 246 FVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRN 305
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
+V + VF G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA
Sbjct: 306 VV-FDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGA 364
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
++D++ + L+Y ARGI AR LV +F AE++E
Sbjct: 365 TVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|297622510|ref|YP_003703944.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
gi|297163690|gb|ADI13401.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
Length = 437
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 115/247 (46%), Gaps = 21/247 (8%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
Y E + +A+ +E+++ G K+R+ LQN S AH+ E S E + VS
Sbjct: 198 YTSDEFGERLFASGSVEIILQDGAKLRYVSLQNWSRTVAHVSRIRAHLERNSRLESLTVS 257
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
G +R V GP +E+E+ L +D+ Q H Y Q H AH
Sbjct: 258 LGADAARAEVECVMAGPGSESEM--LGLYFADKGQ---------HFNQYTLQHHAADHAH 306
Query: 316 S----------LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDV 365
S AV+ G ++V+ AQ+TDA Q R+LLL+ + P L+I A+DV
Sbjct: 307 SDLLFKGALRDASTAVYSGLIQVDEGAQKTDAYQTNRNLLLDAASEAVSIPQLEIGANDV 366
Query: 366 KCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
+CSHG+ +S + E Q FY +RG+ E A LV F EV R P + V V+
Sbjct: 367 RCSHGSTVSPVPEDQRFYLMSRGLRPEVAEHVLVTGFLHEVTSRVTLPKVAEYVERVVQA 426
Query: 426 LMGTTDV 432
+G V
Sbjct: 427 KLGVPGV 433
>gi|306843828|ref|ZP_07476426.1| FeS assembly protein SufD [Brucella inopinata BO1]
gi|306275906|gb|EFM57622.1| FeS assembly protein SufD [Brucella inopinata BO1]
Length = 425
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 174/403 (43%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFIQNS-----------ALNLSNLPDGVYVGSLLG 159
+ + ++ D S Q P+L++ I S ++L+ + + + GSL+
Sbjct: 67 TLLKGVAAFDTSAGTQALPALIVGSSVIAASNGVALPAKASKGVSLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QATQLSQFNVTIGKGSKL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|90021063|ref|YP_526890.1| Iron-regulated ABC transporter permease SufD [Saccharophagus
degradans 2-40]
gi|89950663|gb|ABD80678.1| Iron-regulated ABC transporter permease protein SufD
[Saccharophagus degradans 2-40]
Length = 439
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 118/204 (57%), Gaps = 5/204 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ +SV E +G+ +++H LQ + +A HI VR + ++ + ++ G K+ R ++
Sbjct: 208 FTHSVSEFNVGENARLQHYRLQQEQEDAIHIGGVFVRLDRSADLDSFHMAFGSKIKRVDI 267
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 323
VQ G + ++++ +L ++Q D H+ ++H +C ++ + I+A S AVF+
Sbjct: 268 EVQHQGEGSTSKINGVYLPKNNQHIDYHT--CIEHAVPHCTSQETFRGIIADS-AHAVFN 324
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + ++ AQ+T A ++LL +A ++ KP L+I ADDV+C+HGA I+ L+E L Y
Sbjct: 325 GRIHIHPDAQKTLAELSNKNLLTSDKAQIDTKPELEIYADDVRCAHGATIAQLDEKSLNY 384
Query: 384 FQARGIDLETARKALVFSFGAEVI 407
+ RGI L+ A+ L + F E+I
Sbjct: 385 LRTRGISLDEAQVMLSYGFINELI 408
>gi|402487875|ref|ZP_10834690.1| FeS assembly protein SufD [Rhizobium sp. CCGE 510]
gi|401813043|gb|EJT05390.1| FeS assembly protein SufD [Rhizobium sp. CCGE 510]
Length = 424
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 1/209 (0%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + V ++ +G+G ++ LQ Q H+ + + L ++ GGKL
Sbjct: 196 GDAALVSHVSDITVGEGAELTWIILQQQGAEDTHLGQIRIDLGADAKLRLFVINAGGKLV 255
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 321
R +H++ G + L +LL + D+ L D P ++ + +V + V
Sbjct: 256 RQELHIKVTGEGADLTLRGINLLGGESHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGV 314
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G ++V AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L
Sbjct: 315 FQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHL 374
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERF 410
+Y ARGI AR LV +F AE++E
Sbjct: 375 YYLMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|110637386|ref|YP_677593.1| iron-regulated ABC transporter membrane-spanning permease
[Cytophaga hutchinsonii ATCC 33406]
gi|110280067|gb|ABG58253.1| Iron-regulated ABC transporter permease protein SufD [Cytophaga
hutchinsonii ATCC 33406]
Length = 425
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 7/219 (3%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G + + N+ ++ K + +QN N+ I + + E S ++ G L
Sbjct: 199 GKNTAFTNAFTHAILKKEAYLEQYKIQNDIDNSNFIHNSQIVHEGKSNSYTTTITLNGGL 258
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV-AHSL 317
R+N+++ E L+ +L Q D H+ L+DH P Y +L+K I+ S
Sbjct: 259 VRNNLNITLGAEYCEAYLNGLYLEKGAQHVDNHT--LVDHAMPHCYSNELYKGILDGKST 316
Query: 318 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 377
G VF+G + V + AQ+T+A Q +++LL A+V+ KP L+I ADDVKCSHGA L+
Sbjct: 317 G--VFNGKIWVRKDAQKTNAFQSNKNILLSKEASVHTKPQLEIFADDVKCSHGATTGQLD 374
Query: 378 ESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
+FY +ARG+ + A+K LV + +V+++ + +R
Sbjct: 375 PEAMFYLRARGVGEDKAKKMLVHAIAFDVLDKVKHDELR 413
>gi|17987323|ref|NP_539957.1| ABC transporter ATP-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|225852444|ref|YP_002732677.1| FeS assembly protein SufD [Brucella melitensis ATCC 23457]
gi|256264062|ref|ZP_05466594.1| FeS assembly protein SufD [Brucella melitensis bv. 2 str. 63/9]
gi|260563953|ref|ZP_05834439.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. 16M]
gi|265991025|ref|ZP_06103582.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. Rev.1]
gi|265994862|ref|ZP_06107419.1| FeS assembly protein SufD [Brucella melitensis bv. 3 str. Ether]
gi|384211309|ref|YP_005600391.1| FeS assembly protein SufD [Brucella melitensis M5-90]
gi|384408411|ref|YP_005597032.1| FeS assembly protein SufD [Brucella melitensis M28]
gi|384445007|ref|YP_005603726.1| FeS assembly protein SufD [Brucella melitensis NI]
gi|17983004|gb|AAL52221.1| abc transporter ATP-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|225640809|gb|ACO00723.1| FeS assembly protein SufD [Brucella melitensis ATCC 23457]
gi|260153969|gb|EEW89061.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. 16M]
gi|262765975|gb|EEZ11764.1| FeS assembly protein SufD [Brucella melitensis bv. 3 str. Ether]
gi|263001809|gb|EEZ14384.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. Rev.1]
gi|263094257|gb|EEZ18127.1| FeS assembly protein SufD [Brucella melitensis bv. 2 str. 63/9]
gi|326408958|gb|ADZ66023.1| FeS assembly protein SufD [Brucella melitensis M28]
gi|326538672|gb|ADZ86887.1| FeS assembly protein SufD [Brucella melitensis M5-90]
gi|349742999|gb|AEQ08542.1| FeS assembly protein SufD [Brucella melitensis NI]
Length = 425
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 171/403 (42%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG 159
+ + ++ D S Q P+L+ I N + P GV + GSL+
Sbjct: 67 TLLKGVAAFDTSAGTQALPALIAGSSIIAASNGVALAAKAPKGVLLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QATQLSQFNVTIGKGSRL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|414162820|ref|ZP_11419067.1| FeS assembly protein SufD [Afipia felis ATCC 53690]
gi|410880600|gb|EKS28440.1| FeS assembly protein SufD [Afipia felis ATCC 53690]
Length = 436
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 11/231 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+V AEG Y +EV +G +++H L + +AA+I A R ++
Sbjct: 202 FVGAEGASAYQVYDQVEVSVGDDTELQHVRLMEDARDAANITTAAFRLGARVKLNTFGLT 261
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 313
G +SR+ + G +E + +LL S + D + L++DH P R++ + ++
Sbjct: 262 QGAAVSRYQGFITFAGEGSELSTNGVNLLGSRRHGD--TTLIVDHTVPNCISREVFRAVL 319
Query: 314 ---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
+HS VF G + V + AQ+TD +TR+LLL A + KP L+I ADDV C HG
Sbjct: 320 DDQSHS----VFQGRIIVRQIAQKTDGKMMTRALLLSDEAEADNKPELEIFADDVACGHG 375
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
A ++E LFY +ARG+ + A+ L+ +F E IE +R+ ++
Sbjct: 376 ATAGAIDEELLFYLRARGLPEKEAQGLLIAAFVGEAIESIVDDDLRDIAIA 426
>gi|399036564|ref|ZP_10733598.1| FeS assembly protein SufD [Rhizobium sp. CF122]
gi|398065892|gb|EJL57504.1| FeS assembly protein SufD [Rhizobium sp. CF122]
Length = 424
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 180/417 (43%), Gaps = 53/417 (12%)
Query: 33 VSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSR 92
+++QTT Q T ++ +I+ + LP S + +RD L P+R
Sbjct: 1 MNMQTTSRQ-TAAEAALIEAFNNQVGELPGDGSVIA-------IRDRLLDDLKKAGLPTR 52
Query: 93 KDEPFRFTDTSMI-----------KSSQIQPITRPSSSLDVSTDAQFPSL-VLIDGF-IQ 139
+ E + +TD + S P+ SS L V P L +DG I
Sbjct: 53 RIEAWHYTDLKTLLRAIPEQAGDAGSEARDPLVEESSVLSVIQG--VPDLKASVDGLDIS 110
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPA 199
+ A LSN +G+ G D I + F+ + D+ + P L + +V A
Sbjct: 111 SYAAQLSNGTAATGLGAF-GSDDAIGRINGSFVRDGYVIDVAAE-TALEEP-LEIQFVHA 167
Query: 200 EG--------------------------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 233
G +D + + V ++ +G+G ++ +Q Q
Sbjct: 168 GGQTHTRLPISFGANVKATVIERHLAVTSDAAFVSHVSDITVGEGTELTWIIIQQQGAED 227
Query: 234 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 293
H+ V + +L ++ GGKL R +H++ G + L +LL ++ D+
Sbjct: 228 THLGQIRVDLGADAKLKLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAETHTDVT 287
Query: 294 SRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 353
L + P ++ + +V + VF G ++V AQ+TDA +LL+ A +
Sbjct: 288 MVLGHNVPHTGSTEVIRNVV-FDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFS 346
Query: 354 VKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
VKP L+I ADDV+C HGA ++D++++ L+Y ARGI AR LV +F AE++E
Sbjct: 347 VKPELEIFADDVQCGHGATVADIDDNHLYYMMARGIPENKARAMLVNAFVAEIVEEL 403
>gi|239831807|ref|ZP_04680136.1| FeS assembly protein SufD [Ochrobactrum intermedium LMG 3301]
gi|239824074|gb|EEQ95642.1| FeS assembly protein SufD [Ochrobactrum intermedium LMG 3301]
Length = 425
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 170/400 (42%), Gaps = 57/400 (14%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L DS LP + RD++ ++L PSR+ E + +TD + +
Sbjct: 18 ALIDSFADRMGDLPGNGDVVVARDAALESLKENGIPSRRVESWHYTD--------FRTLL 69
Query: 115 RPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG--- 159
+ + D S Q P+L+ + N +N P GV + GSL+
Sbjct: 70 KGVAPFDTSAGTQALPALIAGSSIVAASNGVALAANAPQGVSLTPVREALADGSLVTQLR 129
Query: 160 ---------------VSDGIMKRVSDFISEFQCGDLFWSINGMG----------APDLGV 194
VSDG M ++D +E + +I G ++
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADG-TELEAPLELQNIQKAGQGHTRFPVRIGANVKA 188
Query: 195 IYVPAE--GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
V + G ++ SV V +G G ++ L++ A + S L
Sbjct: 189 TIVERQNGGEGDAFSTSVNHVTVGDGAEILWVILRDFG-QATQLSQFNATMGKGSRLTLY 247
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQLHK 310
++ GGKL R VHV G D++ EL +LL D D+ + L+++ R ++ +
Sbjct: 248 IINAGGKLVRQEVHVNVAGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STEIVR 305
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
+V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C HG
Sbjct: 306 NVV-KDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHG 364
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
A +++L + LFY ARGI AR L+ +F AE+IE
Sbjct: 365 ATVTELSKDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|306840446|ref|ZP_07473206.1| FeS assembly protein SufD [Brucella sp. BO2]
gi|306289580|gb|EFM60795.1| FeS assembly protein SufD [Brucella sp. BO2]
Length = 425
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 174/403 (43%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFIQNS-----------ALNLSNLPDGVYVGSLLG 159
+ + ++ D S Q P+L++ I S ++L+ + + + GSL+
Sbjct: 67 TLLKGVAAFDTSAGTQALPALIVGSSVIAASNGVALPAKAPKGVSLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QATQLSQFNVTIGKGSRL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|319898937|ref|YP_004159030.1| ABC-type transport system [Bartonella clarridgeiae 73]
gi|319402901|emb|CBI76452.1| ABC-type transport system [Bartonella clarridgeiae 73]
Length = 422
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 178/408 (43%), Gaps = 37/408 (9%)
Query: 42 ATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT- 100
+T S P +I + E + ++ LP +Q +R + + T PSRK E + +T
Sbjct: 2 STNSQPKLIAVEEDIINNFNQRIDDLPGNETIQVIRKKAIELFQKTRLPSRKMEYWHYTN 61
Query: 101 ---------DTSMIKSSQIQPITRPSS---------SLDVSTDAQFPSLVLIDGFIQNSA 142
D S S Q P + +L +S A L F +NSA
Sbjct: 62 LRVLLKSVSDFSEFNSEQSIDTLLPENIVFSIENGKALTLSKIAGVEVEHLATAFDKNSA 121
Query: 143 LNLSNLPDGVYVGSL--LGVSDGIMKRVSDF--------ISEFQCGD---LFWSINGMGA 189
S + D ++G L V+DG + +SD + Q G F I +G
Sbjct: 122 EINSTISDENFIGQLNTAFVTDGWLFNISDNTKLDAPIELQNIQMGGQSHTFSRIK-VGK 180
Query: 190 PDLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI-KWTAVRQETAS 247
VI GND + +SV + + V ++++ NA ++ A+ E A
Sbjct: 181 NSQAVIIERQIGNDKDTFVSSVFSLNLAANSSVTWILIRDRGSNATQFGQFRALLAEDAE 240
Query: 248 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 307
+L ++ G +L+R + ++ LG + +L + +LL DL + + R+
Sbjct: 241 -LKLYVINIGSQLNRQEIDIELLGKKSNFQLRAINLLSGKTHSDLTMTVRHVEEKSISRE 299
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V F G ++V + AQ+TDA SL++ A +VKP L+I ADDV C
Sbjct: 300 IVRNVVTDK-AHGAFQGVIRVAQKAQETDARMACNSLIISDDAEFDVKPELEIFADDVAC 358
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
SHGA ++ + LFY ARGI + A + LV F +E+I+ SI
Sbjct: 359 SHGATVTKINYDHLFYLMARGISFKIACELLVKGFISELIDDIKQDSI 406
>gi|444311366|ref|ZP_21146976.1| FeS assembly protein SufD [Ochrobactrum intermedium M86]
gi|443485282|gb|ELT48074.1| FeS assembly protein SufD [Ochrobactrum intermedium M86]
Length = 425
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 170/400 (42%), Gaps = 57/400 (14%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L DS LP + RD++ ++L PSR+ E + +TD + +
Sbjct: 18 ALIDSFADRMGDLPGNGDVVVARDAALESLKENGIPSRRIESWHYTD--------FRTLL 69
Query: 115 RPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG--- 159
+ + D S Q P+L+ + N +N P GV + GSL+
Sbjct: 70 KGVAPFDTSAGTQALPALIAGSSIVAASNGVALAANAPQGVSLTPVREALADGSLVTQLR 129
Query: 160 ---------------VSDGIMKRVSDFISEFQCGDLFWSINGMG----------APDLGV 194
VSDG M ++D +E + +I G ++
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADG-TELEAPLELQNIQKAGQGHTRFPVRIGANVKA 188
Query: 195 IYVPAE--GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 252
V + G ++ SV V +G G ++ L++ A + S L
Sbjct: 189 TIVERQNGGEGDAFSTSVNHVTVGDGAEILWVILRDFG-QATQLSQFNATMGKGSRLTLY 247
Query: 253 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQLHK 310
++ GGKL R VHV G D++ EL +LL D D+ + L+++ R ++ +
Sbjct: 248 IINAGGKLVRQEVHVNVAGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STEIVR 305
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
+V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C HG
Sbjct: 306 NVV-KDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHG 364
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
A +++L + LFY ARGI AR L+ +F AE+IE
Sbjct: 365 ATVTELSKDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|148558883|ref|YP_001258906.1| FeS assembly protein SufD [Brucella ovis ATCC 25840]
gi|148370140|gb|ABQ60119.1| FeS assembly protein SufD [Brucella ovis ATCC 25840]
Length = 425
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 171/403 (42%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG 159
+ + ++ D S Q P+L+ I N + P GV + GSL+
Sbjct: 67 TLLKGVAAFDTSAGTQVLPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QATQLSQFNVTIGKGSRL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|381395172|ref|ZP_09920878.1| Fe-S cluster assembly protein SufD [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379329271|dbj|GAB56011.1| Fe-S cluster assembly protein SufD [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 419
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 164/387 (42%), Gaps = 46/387 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP-SL 131
L +R + L + WP + E +R T + IK ++ + + + P L
Sbjct: 19 LAPMRQQALSKLQTQGWPHARSEEWRLTPLTSIKERTVEASSVAVNYIVPQIKGLNPIDL 78
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD 191
V +DG + + LN LP G+ V +L +++ + + +
Sbjct: 79 VFVDGVLVTN-LNDIRLPTGLSVHALSDAPSAAQTKITALFGHVKPTRHVFGLVNDAICQ 137
Query: 192 LGVIYVPAEGN---------------DC---------YWANSVLEVVI-GKGGKVRHS-- 224
G IY+ + N DC NS L+V+ G G +
Sbjct: 138 QG-IYIEVDENCSIDTPLRIVNLATKDCDAHTRALVNLGKNSQLKVIEHGSGSAASFTTA 196
Query: 225 ---YLQNQSLNAAHIKWT----AVRQETASGYELVE--------VSTGGKLSRHNVHVQQ 269
Y Q H ++ A +Q S + L + V+ G +LSR +V +
Sbjct: 197 FAEYAIGQEARLEHYRFAFFTGAAKQVGGSHFSLQDKANLNSTLVAYGSELSRLDVDIIH 256
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
G ++++ +LL + DLHS + P G + + I+ +AVF G + ++
Sbjct: 257 AGEHANAKMNAIYLLAEGEFFDLHSTIEHAMPNGTTEENARGIIGDR-ARAVFSGRIHIH 315
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
R AQ+T A R+LLL RA +N KP L+I ADDVKC+HGA ++++EE L+Y +RGI
Sbjct: 316 RDAQKTLAELNNRNLLLSRRAMINTKPELEIYADDVKCAHGATVAEIEEQALYYLLSRGI 375
Query: 390 DLETARKALVFSFGAEVIERFPYPSIR 416
A L F F E++ +IR
Sbjct: 376 KRSKALVMLNFGFIQELVNDIDNENIR 402
>gi|182677102|ref|YP_001831248.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632985|gb|ACB93759.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
Length = 444
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 174/414 (42%), Gaps = 65/414 (15%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQP 112
+L +S + ++LP + KLR+ + + P R+ E + +TD T M ++ + P
Sbjct: 15 TLVESFGAVKATLPGTADVAKLREENFAAFVEAGLPHRRVESWHYTDLRTIMREALPLAP 74
Query: 113 ITRPSSSLDVSTDA-----QFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGV-SDGIM 165
+ P++ + D LVL+DG F+ + +P GV V SL V + G
Sbjct: 75 VPTPAALEGLRKDVGALTLHGTKLVLVDGAFVPELS---DTVPAGVTVHSLASVLTKGPA 131
Query: 166 KRVSDFISE-FQCGDLFWSINGMGAPD---------------LGVIYVPA---------- 199
+ ++ E GD ++N D L +IY A
Sbjct: 132 ELLTLLSGEGLGAGDAIVALNAAMMQDGIVVEVAPGAVIAEPLNLIYATASAMPVARFSR 191
Query: 200 -------------------EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL-NAAHIKWT 239
EG N L +G KV H+ SL N+ I
Sbjct: 192 SLVAVGAKASVTIAESSLGEGGRSGQTNGCLIFSVGDEAKVNHTTQLTGSLANSIRIDTF 251
Query: 240 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 299
V ++ + +G L+R + ++ G + E L LL + D + L ++
Sbjct: 252 MVSLGAKVKFDSFALVSGAGLTRRQIFLRFNGEEAEAALRGASLLRGREYAD--TTLFVE 309
Query: 300 H--PRGYCRQLHKCIV-AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKP 356
H P R+L K I+ S+G VF G + V AQ TD L+++LLL +N KP
Sbjct: 310 HLAPSCVGRELFKYILDEESVG--VFQGKIHVAPEAQHTDGKMLSKALLLTDGVAMNNKP 367
Query: 357 NLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
L+I ADDV C+HGA L E Q+FY QARG+ + A L+ +F AE+++
Sbjct: 368 ELEIFADDVACAHGATCGGLSEEQIFYLQARGLPYKEAEALLLEAFAAELVDEL 421
>gi|23501817|ref|NP_697944.1| hypothetical protein BR0933 [Brucella suis 1330]
gi|161618889|ref|YP_001592776.1| FeS assembly protein SufD [Brucella canis ATCC 23365]
gi|225627419|ref|ZP_03785456.1| FeS assembly protein SufD [Brucella ceti str. Cudo]
gi|256369359|ref|YP_003106867.1| FeS assembly protein SufD [Brucella microti CCM 4915]
gi|260566516|ref|ZP_05836986.1| FeS assembly protein SufD [Brucella suis bv. 4 str. 40]
gi|260754676|ref|ZP_05867024.1| FeS assembly protein SufD [Brucella abortus bv. 6 str. 870]
gi|260883702|ref|ZP_05895316.1| FeS assembly protein SufD [Brucella abortus bv. 9 str. C68]
gi|261213927|ref|ZP_05928208.1| FeS assembly protein SufD [Brucella abortus bv. 3 str. Tulya]
gi|261218717|ref|ZP_05932998.1| Fe-S assembly protein SufD [Brucella ceti M13/05/1]
gi|261222111|ref|ZP_05936392.1| FeS assembly protein SufD [Brucella ceti B1/94]
gi|261314327|ref|ZP_05953524.1| FeS assembly protein SufD [Brucella pinnipedialis M163/99/10]
gi|261317577|ref|ZP_05956774.1| Fe-S assembly protein SufD [Brucella pinnipedialis B2/94]
gi|261321785|ref|ZP_05960982.1| Fe-S assembly protein SufD [Brucella ceti M644/93/1]
gi|261752244|ref|ZP_05995953.1| FeS assembly protein SufD [Brucella suis bv. 5 str. 513]
gi|261754903|ref|ZP_05998612.1| FeS assembly protein SufD [Brucella suis bv. 3 str. 686]
gi|261758131|ref|ZP_06001840.1| FeS assembly protein SufD [Brucella sp. F5/99]
gi|265988611|ref|ZP_06101168.1| FeS assembly protein SufD [Brucella pinnipedialis M292/94/1]
gi|265998076|ref|ZP_06110633.1| FeS assembly protein SufD [Brucella ceti M490/95/1]
gi|297248276|ref|ZP_06931994.1| FeS assembly protein SufD [Brucella abortus bv. 5 str. B3196]
gi|340790561|ref|YP_004756026.1| FeS assembly protein SufD [Brucella pinnipedialis B2/94]
gi|376274321|ref|YP_005114760.1| FeS assembly protein SufD [Brucella canis HSK A52141]
gi|376280610|ref|YP_005154616.1| hypothetical protein BSVBI22_A0929 [Brucella suis VBI22]
gi|384224604|ref|YP_005615768.1| hypothetical protein BS1330_I0929 [Brucella suis 1330]
gi|23347751|gb|AAN29859.1| conserved hypothetical protein [Brucella suis 1330]
gi|161335700|gb|ABX62005.1| FeS assembly protein SufD [Brucella canis ATCC 23365]
gi|225617424|gb|EEH14469.1| FeS assembly protein SufD [Brucella ceti str. Cudo]
gi|255999519|gb|ACU47918.1| FeS assembly protein SufD [Brucella microti CCM 4915]
gi|260156034|gb|EEW91114.1| FeS assembly protein SufD [Brucella suis bv. 4 str. 40]
gi|260674784|gb|EEX61605.1| FeS assembly protein SufD [Brucella abortus bv. 6 str. 870]
gi|260873230|gb|EEX80299.1| FeS assembly protein SufD [Brucella abortus bv. 9 str. C68]
gi|260915534|gb|EEX82395.1| FeS assembly protein SufD [Brucella abortus bv. 3 str. Tulya]
gi|260920695|gb|EEX87348.1| FeS assembly protein SufD [Brucella ceti B1/94]
gi|260923806|gb|EEX90374.1| Fe-S assembly protein SufD [Brucella ceti M13/05/1]
gi|261294475|gb|EEX97971.1| Fe-S assembly protein SufD [Brucella ceti M644/93/1]
gi|261296800|gb|EEY00297.1| Fe-S assembly protein SufD [Brucella pinnipedialis B2/94]
gi|261303353|gb|EEY06850.1| FeS assembly protein SufD [Brucella pinnipedialis M163/99/10]
gi|261738115|gb|EEY26111.1| FeS assembly protein SufD [Brucella sp. F5/99]
gi|261741997|gb|EEY29923.1| FeS assembly protein SufD [Brucella suis bv. 5 str. 513]
gi|261744656|gb|EEY32582.1| FeS assembly protein SufD [Brucella suis bv. 3 str. 686]
gi|262552544|gb|EEZ08534.1| FeS assembly protein SufD [Brucella ceti M490/95/1]
gi|264660808|gb|EEZ31069.1| FeS assembly protein SufD [Brucella pinnipedialis M292/94/1]
gi|297175445|gb|EFH34792.1| FeS assembly protein SufD [Brucella abortus bv. 5 str. B3196]
gi|340559020|gb|AEK54258.1| FeS assembly protein SufD [Brucella pinnipedialis B2/94]
gi|343382784|gb|AEM18276.1| hypothetical protein BS1330_I0929 [Brucella suis 1330]
gi|358258209|gb|AEU05944.1| hypothetical protein BSVBI22_A0929 [Brucella suis VBI22]
gi|363402888|gb|AEW13183.1| FeS assembly protein SufD [Brucella canis HSK A52141]
Length = 425
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 171/403 (42%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG 159
+ + ++ D S Q P+L+ I N + P GV + GSL+
Sbjct: 67 TLLKGVAAFDTSAGTQALPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QATQLSQFNVTIGKGSRL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|399910100|ref|ZP_10778414.1| Fe-S cluster assembly protein SufD [Halomonas sp. KM-1]
Length = 356
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 5/223 (2%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
E + N V E+++ +G + H LQ L H+ V Q S Y ++ GG
Sbjct: 110 GESEAANFTNLVAELMLDRGAILTHYKLQEAPLADLHVASIHVEQNRDSRYTSFNLNLGG 169
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHS 316
L R+++ + G E + L Q + + L +H PR + + +K I+
Sbjct: 170 GLVRNDLIGELNGEGAEANF--YGLFYGQGRQHIDNHTLANHNAPRTFSNENYKGIL-DD 226
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
+ VF+G V V R +Q+ + Q +LLL RA ++ KP L+I ADDVKCSHG L
Sbjct: 227 RARGVFNGKVVVKRDSQKIEGFQSNANLLLSDRAEIDAKPELEIYADDVKCSHGTTTGQL 286
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+E ++ + RGID +TAR L +F EV+E +I +V
Sbjct: 287 DEEAIYALRTRGIDEQTARGLLTLAFAGEVMELVDLDAISERV 329
>gi|261325033|ref|ZP_05964230.1| FeS assembly protein SufD [Brucella neotomae 5K33]
gi|261301013|gb|EEY04510.1| FeS assembly protein SufD [Brucella neotomae 5K33]
Length = 425
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 171/403 (42%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG 159
+ + ++ D S Q P+L+ I N + P GV + GSL+
Sbjct: 67 TLLKGVAAFDTSAGTQALPALIADSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QATQLSQFNVTIGKGSRL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|78484926|ref|YP_390851.1| FeS assembly protein SufD [Thiomicrospira crunogena XCL-2]
gi|78363212|gb|ABB41177.1| Iron-regulated ABC transporter permease protein SufD
[Thiomicrospira crunogena XCL-2]
Length = 434
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+V E N V +V + + + LQ+ + + + Q ++S E +
Sbjct: 201 FVSLESGCSALVNDVAKVTVADHARFKQIVLQDMNPESFYFANQFFEQSSSSVIETNYIG 260
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
G ++SRH ++ LG +E+ +S L Q D SR H +C RQLHK +V
Sbjct: 261 LGCEISRHQNYLMMLGEHSESMQNSIGLGTGKQIID--SRTSTTHQAAHCNSRQLHK-LV 317
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+ VF+G + V + AQ+TD ++LLL A V+ KP L+I ADDVKCSHG A
Sbjct: 318 LDDQSRGVFNGMIHVVKGAQKTDGQMDNKNLLLSKTAKVDAKPQLEIYADDVKCSHGCAS 377
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
++E Q+FY QARGI A + + +F E +E ++RN
Sbjct: 378 GQIDEQQVFYAQARGIRKADALQLITRAFLLEPLESITNLTLRN 421
>gi|365884634|ref|ZP_09423671.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 375]
gi|365286826|emb|CCD96202.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 375]
Length = 441
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y N+ +++V+G ++ H + ++ +A HI + + + GG L R+
Sbjct: 216 YQVNTAMQLVVGDEARIDHIKVVSEGGSALHIGSLLANIGARATFNQLGFVAGGSLVRNQ 275
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP--RGYCRQLHKCIVAHSLGQAVF 322
+ V+ G T ++ LL Q D + L ++H G R+ K +V + +AVF
Sbjct: 276 LFVRLAGEGTVADIRGGSLLSGTQHAD--TTLSIEHAAENGQSRETFKAVVGDT-ARAVF 332
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V AQ+TDA ++R+LLL A + KP L+I ADDV+C HG +++ LF
Sbjct: 333 QGKITVAPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAIDDELLF 392
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Y ARGI A+ L+ +F E+IE S+R+ + + +G
Sbjct: 393 YLMARGIPPAEAKALLIQAFIGEIIEGAANESVRDALTGALLGWLG 438
>gi|265984021|ref|ZP_06096756.1| Fe-S assembly protein SufD [Brucella sp. 83/13]
gi|306840081|ref|ZP_07472867.1| FeS assembly protein SufD [Brucella sp. NF 2653]
gi|264662613|gb|EEZ32874.1| Fe-S assembly protein SufD [Brucella sp. 83/13]
gi|306404809|gb|EFM61102.1| FeS assembly protein SufD [Brucella sp. NF 2653]
Length = 425
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 171/403 (42%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG 159
+ + ++ D S Q P+L+ I N + P GV + GSL+
Sbjct: 67 TLLKGVAAFDTSAGTQALPALIAGSSVIAASNGVALAAKAPKGVSLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QATQLSQFNVTIGKGSRL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|225154860|ref|ZP_03723358.1| FeS assembly protein SufD [Diplosphaera colitermitum TAV2]
gi|224804390|gb|EEG22615.1| FeS assembly protein SufD [Diplosphaera colitermitum TAV2]
Length = 447
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 5/232 (2%)
Query: 195 IYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 254
+V AE + A+ V ++ G G + + Q S + + ++ E + + V
Sbjct: 214 FFVSAEAGARHLASGVNDLHAGPGAHLTYVGAQAWSQHTLAFQSNSIVAERDARVLSLNV 273
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCI 312
GGK +RH H + LGP +E+ + L ++ Q+ R L H P L+K
Sbjct: 274 HLGGKRARHESHSRLLGPGAHSEMLA--LTIASGAQEFDQRTLQTHAAPHTSSNLLYKNA 331
Query: 313 VAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
+ + + +F G + V AQ+TDA Q R+L+L A N P L+I A+DV+C+HG+
Sbjct: 332 LLDT-AKTIFSGLIIVEPDAQKTDAYQSNRNLMLSDTAEANSLPGLEIEANDVRCTHGST 390
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
S +E Q FY QARGID + A + LVF F EV+ + P + + +V+ ++
Sbjct: 391 TSRIEPEQQFYLQARGIDPKNAHELLVFGFFEEVLGKLDNPDLHDALVTLIR 442
>gi|431798406|ref|YP_007225310.1| FeS assembly protein SufD [Echinicola vietnamensis DSM 17526]
gi|430789171|gb|AGA79300.1| FeS assembly protein SufD [Echinicola vietnamensis DSM 17526]
Length = 416
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y+ NS+ EV + + +QN+S A + + V +S G R+N
Sbjct: 192 YFLNSLTEVKVDDNAHLYFHKIQNESDAAIDVNNFEADIHRDATLTTVTLSLKGDFIRNN 251
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
+ + E + +LL D H+ + P +L+K I+A + VF+G
Sbjct: 252 LTLNLRDSGCEGNMYGLYLLNGGTHVDNHTNVDHTMPHADSNELYKGILADK-SRGVFNG 310
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V + AQ+T+A Q ++LL A +N KP L+I ADDVKCSHG L+E LFY
Sbjct: 311 KIFVRQDAQKTNAFQQNNNILLSEDAIINTKPQLEIWADDVKCSHGCTTGQLDEEALFYL 370
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
QARGI A+ L+++F E+++ +R ++ V+ +G
Sbjct: 371 QARGIGKVEAKNLLLYAFAGEILDHIKIEPLREYCIALVQERLG 414
>gi|424913816|ref|ZP_18337180.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392849992|gb|EJB02513.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 424
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 1/201 (0%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
V ++ +G+G ++ LQ H+ + + L ++ GGKL R +H++
Sbjct: 204 VSDITVGEGAELTWIILQQHGAEDTHLGQIRIDLGADAKLRLFVINAGGKLVRQELHIKV 263
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 329
G + L +LL +D D+ L D P ++ + +V + VF G ++V
Sbjct: 264 TGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGVFQGMIRVA 322
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
AQ+TDA +LL+ A +VKP L+I ADDV+C HGA ++D++ + L+Y ARGI
Sbjct: 323 PDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHLYYMMARGI 382
Query: 390 DLETARKALVFSFGAEVIERF 410
AR LV +F AE++E
Sbjct: 383 PENKARAMLVNAFVAEIVEEL 403
>gi|294507395|ref|YP_003571453.1| FeS assembly protein SufD [Salinibacter ruber M8]
gi|294343723|emb|CBH24501.1| FeS assembly protein SufD [Salinibacter ruber M8]
Length = 487
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 115/224 (51%), Gaps = 1/224 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N+V E +G+ + H +Q++ NA+ + A +QE S Y ++ G++ R+N
Sbjct: 262 FTNTVSEAFVGERANLEHYLVQDEGANASQVHTRAGQQEDDSVYSTNTITFSGEVVRNNA 321
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
++ G E+ L + + D H+++ P +L+K ++ + AVF+G
Sbjct: 322 TIEVNGSFCESNLYGLCIGKDEMHVDNHTQMNHVQPDCSSNELYKHVL-NDESTAVFNGK 380
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V R +Q+ DA Q +++L A + KP L+I ADDV CSHGA ++E +FY +
Sbjct: 381 VLVTRGSQRIDAYQQNDTIVLTTDANIYTKPELEIYADDVVCSHGATTGQVDEEGVFYLR 440
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
+RG+ A ++ +F EV+ + +RN + ++ G+
Sbjct: 441 SRGLSERRAHILMLQAFTDEVLSEYKIDGLRNYITDKIRRRFGS 484
>gi|300774695|ref|ZP_07084558.1| FeS assembly protein SufD [Chryseobacterium gleum ATCC 35910]
gi|300506510|gb|EFK37645.1| FeS assembly protein SufD [Chryseobacterium gleum ATCC 35910]
Length = 444
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 1/213 (0%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
NSV E+ K LQN + I T +QE S + S GGKL R+N+
Sbjct: 219 TNSVTEIFTYPNAKADWHKLQNDNNTTYLIDNTFAKQEKDSLTTVNTFSFGGKLVRNNLD 278
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 326
G + + ++ ++ DQ D H+ + + P Q +K I + VF+G V
Sbjct: 279 FIHNGSNINSFMNGITIIGKDQLVDHHTAVHHNFPNCESYQNYKGIFDGN-AHGVFNGKV 337
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
V++ AQ+T+A Q ++LL A+++ KP L+I ADDVKCSHG + L E LFY +A
Sbjct: 338 FVDKIAQKTNAYQQNNNVLLSEGASIDTKPQLEIFADDVKCSHGCTVGQLNEDALFYLRA 397
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
RGI + A+ L+++F + ++ ++ ++
Sbjct: 398 RGISKKEAQALLLYAFANDAMQNIDIEPLKEKI 430
>gi|343087339|ref|YP_004776634.1| FeS assembly protein SufD [Cyclobacterium marinum DSM 745]
gi|342355873|gb|AEL28403.1| FeS assembly protein SufD [Cyclobacterium marinum DSM 745]
Length = 435
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 183/410 (44%), Gaps = 57/410 (13%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSL 131
P + L+ + +L +T +P+ K+E +++T+ + +I+ + P S +++ + SL
Sbjct: 27 PFKDLKTVAKSSLEATGFPTLKEEEYKYTNITKRIIDKIENYSSPQSIDNLAEIIKGNSL 86
Query: 132 V-LIDGF--IQNSAL---NLSNLPDGVY---------------VGSL------------- 157
+ +DG+ ++N+ + LSN D + +GS+
Sbjct: 87 INTLDGYRLVRNNGVFDPELSNYKDAGFSVKAFSELDEEQASEIGSIESVDKDAFAALNA 146
Query: 158 --------LGVSDGIMKR----VSDFI---SEFQCGDLFWSINGMGAPDLGVIYVPAEGN 202
+ + DG++ ++DF+ + QC + VI + N
Sbjct: 147 YSFESGIRIDIPDGLIVEQPIVLADFVNPDANGQCVQPRTYYHAGKNSQATVIEITVYLN 206
Query: 203 D-CYWANSVLEVVIGKGGKVRHSYLQ---NQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
+ + N V E + +RH LQ N L ++ R T + V +S G
Sbjct: 207 ESTVFLNEVAEWNVEDNAHIRHYKLQDGHNAELGVSNSGSEIARDAT---FTSVLLSLSG 263
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
++ R+N+ + + + +LL D H+ + P +L+K I+
Sbjct: 264 EMLRNNLSLNINASNCVGNMYGLYLLNGKTHVDNHTNVDHKMPHSESNELYKGILTDQ-S 322
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ VF+G + V + AQ+T+A Q ++LL AT+N KP L+I ADDVKCSHG L+E
Sbjct: 323 RGVFNGKIFVRQDAQKTNAFQQNNNILLSEDATLNTKPQLEIWADDVKCSHGCTTGQLDE 382
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
LFY +ARGI ++A+ L+++F EV++ S +N V +G
Sbjct: 383 EALFYLRARGIGKKSAKSLLLYAFAGEVLDHITNESFKNYCEKIVHERLG 432
>gi|431806218|ref|YP_007233119.1| Iron-sulfur cluster assembly protein SufD [Liberibacter crescens
BT-1]
gi|430800193|gb|AGA64864.1| Iron-sulfur cluster assembly protein SufD [Liberibacter crescens
BT-1]
Length = 397
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 5/222 (2%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ +S+ E+ +G G +V +Q Q + H+ + E + +LV ++ GG L R +
Sbjct: 175 FVSSISEIRVGAGAEVVWVMIQQQGKDDVHLGQLRIILEKEASLKLVVINAGGSLVRQEI 234
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ G D+ L +LL ++ DL L + Q+ + +V VF G
Sbjct: 235 FLDINGKDSGMMLRGINLLRNETHNDLSVVLHHNTIDTRSSQIIRNVVLDQ-ANGVFQGM 293
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
++V R AQ+TDA SLL+ + + +VKP L+I A+DV+C HGA ISD++ L+Y
Sbjct: 294 IRVARDAQRTDARMACNSLLVSNKGSFSVKPELEIFANDVQCGHGATISDIDHRHLYYLM 353
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
ARGI AR L+ +F E++ P Q++ V+N+
Sbjct: 354 ARGIPECKARSLLIHAFIIEILSDLEDP----QLIEAVENIF 391
>gi|163843202|ref|YP_001627606.1| FeS assembly protein SufD [Brucella suis ATCC 23445]
gi|163673925|gb|ABY38036.1| FeS assembly protein SufD [Brucella suis ATCC 23445]
Length = 425
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 171/403 (42%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG 159
+ + ++ D S Q P+L+ I N + P GV + GSL+
Sbjct: 67 TLLKGVAAFDTSAGTQALPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QARQLSQFNVTIGKGSRL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|388257768|ref|ZP_10134947.1| FeS assembly protein SufD [Cellvibrio sp. BR]
gi|387938935|gb|EIK45487.1| FeS assembly protein SufD [Cellvibrio sp. BR]
Length = 442
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NS+ E+ + G ++H L ++ A H+ V + + ++ G + R +
Sbjct: 203 FVNSLTEIYLADGANLQHYRLNMEAEQAQHVGAVHVDLQRNARLRGFALALGASVMRIDY 262
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ GP E +L +L + Q D H+ + P ++ + I++ S QA+F+G
Sbjct: 263 QLNHRGPGAELDLQGVYLPRNQQVVDYHTNICHWVPHCTSNEVFRGIISDS-AQAIFNGR 321
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ +++ AQ+T A ++LL +A VN KP L+I ADDVKC+HGA IS L E+ +Y +
Sbjct: 322 IYIHQDAQKTLAELSNKNLLTSNKAEVNTKPELEIYADDVKCAHGATISQLNENARYYLR 381
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+RG+ A L F F E++E+ P + + + + +L G
Sbjct: 382 SRGLSRAEADVMLSFGFINELLEQIAQPVVHDYLQPRLAHLFG 424
>gi|337741244|ref|YP_004632972.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
gi|386030260|ref|YP_005951035.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM4]
gi|336095328|gb|AEI03154.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM4]
gi|336098908|gb|AEI06731.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
Length = 436
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 176/417 (42%), Gaps = 59/417 (14%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS-SQIQPITR 115
D ++ LP P+ R ++ + S P R+ E +++TD +++++ + + P+
Sbjct: 16 DVFAAARDRLPGEGPVATARKAAFEDFTSRGLPHRRIEEWKYTDLRALLRAVAPLAPVPG 75
Query: 116 PSSSLDVSTDA------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
++ + L L+DG + +L+ LP GV V SL + +
Sbjct: 76 DAALALAAKAQAAIGIENATRLTLVDGVLAPKLSDLALLPKGVRVRSL---RESLAAGAV 132
Query: 170 DFISEFQCGDLFWSINGMGAPDL-------GVI-----YVP------------------- 198
D + D S NG A D GVI Y+
Sbjct: 133 DLLKTTFAADAMISFNGAMATDGVLVEVDDGVILERPLYIAHVATASSASSVTRSKIAIG 192
Query: 199 ------------AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
A G Y + +++ +G +++H L + +AA+I A
Sbjct: 193 KKACVTLVESFVAAGATAYQVHDQVDISVGDDSELQHIRLMEDARDAANITTAAFTLGAR 252
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGY 304
++ G +SR+ + LG D+E + +LL + D + L+++H P
Sbjct: 253 VKLNTFGLNQGAAVSRYQGFISFLGEDSELSTNGVNLLGGRRHAD--TTLVVNHAVPNCT 310
Query: 305 CRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
R++ + ++ ++VF G + V + AQ+TD +TR+LLL A + KP L+I ADD
Sbjct: 311 SREIFRAVL-DDQSRSVFQGRIIVQQDAQKTDGKMMTRALLLSDEAEADNKPELEIFADD 369
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
V C HGA L+E LFY +ARG+ A+ L+ +F E IE +R ++
Sbjct: 370 VACGHGATAGALDEELLFYLRARGLPENEAQSLLISAFVGEAIESIVDDGLRELAIT 426
>gi|62289874|ref|YP_221667.1| hypothetical protein BruAb1_0942 [Brucella abortus bv. 1 str.
9-941]
gi|82699801|ref|YP_414375.1| hypothetical protein BAB1_0950 [Brucella melitensis biovar Abortus
2308]
gi|189024116|ref|YP_001934884.1| hypothetical protein BAbS19_I08890 [Brucella abortus S19]
gi|237815368|ref|ZP_04594366.1| FeS assembly protein SufD [Brucella abortus str. 2308 A]
gi|260545382|ref|ZP_05821123.1| FeS assembly protein SufD [Brucella abortus NCTC 8038]
gi|260757900|ref|ZP_05870248.1| FeS assembly protein SufD [Brucella abortus bv. 4 str. 292]
gi|260761722|ref|ZP_05874065.1| FeS assembly protein SufD [Brucella abortus bv. 2 str. 86/8/59]
gi|376273338|ref|YP_005151916.1| FeS assembly protein SufD [Brucella abortus A13334]
gi|423166956|ref|ZP_17153659.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI435a]
gi|423170670|ref|ZP_17157345.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI474]
gi|423173250|ref|ZP_17159921.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI486]
gi|423177465|ref|ZP_17164111.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI488]
gi|423180101|ref|ZP_17166742.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI010]
gi|423183233|ref|ZP_17169870.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI016]
gi|423185827|ref|ZP_17172441.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI021]
gi|423188965|ref|ZP_17175575.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI259]
gi|62196006|gb|AAX74306.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615902|emb|CAJ10906.1| Protein of unknown function UPF0051 [Brucella melitensis biovar
Abortus 2308]
gi|189019688|gb|ACD72410.1| hypothetical protein BAbS19_I08890 [Brucella abortus S19]
gi|237790205|gb|EEP64415.1| FeS assembly protein SufD [Brucella abortus str. 2308 A]
gi|260096789|gb|EEW80664.1| FeS assembly protein SufD [Brucella abortus NCTC 8038]
gi|260668218|gb|EEX55158.1| FeS assembly protein SufD [Brucella abortus bv. 4 str. 292]
gi|260672154|gb|EEX58975.1| FeS assembly protein SufD [Brucella abortus bv. 2 str. 86/8/59]
gi|363400944|gb|AEW17914.1| FeS assembly protein SufD [Brucella abortus A13334]
gi|374540718|gb|EHR12218.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI474]
gi|374542578|gb|EHR14066.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI435a]
gi|374542889|gb|EHR14374.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI486]
gi|374549946|gb|EHR21388.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI010]
gi|374550465|gb|EHR21904.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI016]
gi|374550749|gb|EHR22185.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI488]
gi|374558623|gb|EHR30016.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI259]
gi|374559621|gb|EHR31007.1| FeS assembly protein SufD [Brucella abortus bv. 1 str. NI021]
Length = 425
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 171/403 (42%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG 159
+ + ++ D S Q P+L+ I N + P GV + GSL+
Sbjct: 67 TLLQGVAAFDTSAGTQALPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QATQLSQFNVTIGKGSRL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|299133788|ref|ZP_07026982.1| FeS assembly protein SufD [Afipia sp. 1NLS2]
gi|298591624|gb|EFI51825.1| FeS assembly protein SufD [Afipia sp. 1NLS2]
Length = 436
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 11/231 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+V AEG Y + +EV IG +++H L + +AA+I A R + ++
Sbjct: 202 FVGAEGAATYQVHDQVEVSIGDDAELQHVRLMEDARDAANITTAAFRLGARTKLNSFGLT 261
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 313
G +SR+ + G +E + +LL S + D + L++DH P R++ + ++
Sbjct: 262 QGAAVSRYQGFITFAGEGSELSTNGVNLLGSRRHGD--TTLVVDHAVPNCISREVFRAVL 319
Query: 314 ---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
+HS VF G + V + AQ+TD +TR+LLL + KP L+I ADDV C HG
Sbjct: 320 DDQSHS----VFQGRIIVRQDAQKTDGKMMTRALLLSDDTEADNKPELEIFADDVACGHG 375
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
A ++E LFY +ARG+ + A+ L+ +F E IE +R+ ++
Sbjct: 376 ATAGAIDEELLFYLRARGLPEKEAQGLLIAAFVGEAIESIVDEGLRDIAIA 426
>gi|163759513|ref|ZP_02166598.1| putative iron-sulfur cluster assembly protein [Hoeflea
phototrophica DFL-43]
gi|162283110|gb|EDQ33396.1| putative iron-sulfur cluster assembly protein [Hoeflea
phototrophica DFL-43]
Length = 424
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 201 GNDCY--WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
G+D + +++SV + + G V +Q + + H+ + R T + L ++ GG
Sbjct: 193 GDDEHSGFSSSVSTLDVADGADVTWVIVQQRGASDQHLGQLSARLGTGAKLRLFVINAGG 252
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
KL+R VHV G D +L + +LL D D+ L + ++ + +V
Sbjct: 253 KLTRQEVHVDVAGEDAHFDLRTVNLLAGDSHTDVTLTLGHNVANTTSSEIVRNVVLDR-A 311
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ VF G + V + AQ+TDA +LLL + KP L+I ADDV C+HGA + DL+E
Sbjct: 312 RGVFQGQICVAQEAQKTDAQMACNTLLLSDDGEFSAKPELEIFADDVICAHGATVIDLDE 371
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERF 410
LFY ARGI + AR LV F E++E
Sbjct: 372 DHLFYLMARGITEKAARGLLVNGFVDELVEEL 403
>gi|402850222|ref|ZP_10898431.1| Iron-sulfur cluster assembly protein SufD [Rhodovulum sp. PH10]
gi|402499521|gb|EJW11224.1| Iron-sulfur cluster assembly protein SufD [Rhodovulum sp. PH10]
Length = 448
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 108/217 (49%), Gaps = 5/217 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y ++ L++V+G G ++ + + A H+ T V + + +TGG +SR+
Sbjct: 218 YQVDNALDIVVGDGARLERVKVGAEGDAALHVSTTVVVLGREVEFRDLLFTTGGAVSRNQ 277
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
V V+ GP T L LL Q D + L++DH G C R+ K ++ ++VF
Sbjct: 278 VFVRCDGPGTTLTLDGASLLKGRQHSD--ATLVVDHAIGGCKSRETFKAVL-DGESRSVF 334
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G V AQ+TD + +LLL A + KP L+I ADDV C HGA L+E F
Sbjct: 335 QGKTVVRPDAQKTDGKMASHALLLSNDAEADHKPELEIFADDVVCGHGATAGALDEDLKF 394
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Y ARGI A L+ SF EVI++ S+R+ +
Sbjct: 395 YLMARGIPEREAETLLIQSFVGEVIDQVADESVRDAL 431
>gi|365887723|ref|ZP_09426545.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3809]
gi|365336698|emb|CCD99076.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3809]
Length = 441
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y N+ +++V+G ++ H + + +A HI + + + GG L R+
Sbjct: 216 YQVNTAMQLVVGDEARIDHIKVVSDGNSALHIGSLLANIGARATFNQLGFVAGGSLIRNQ 275
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP--RGYCRQLHKCIVAHSLGQAVF 322
+ V+ G T ++ LL Q D + L ++H G R+ K +V + +AVF
Sbjct: 276 LFVRLAGEGTVADIRGGSLLSGTQHAD--TTLAIEHAAENGQSRETFKAVVGDT-ARAVF 332
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V AQ+TDA ++R+LLL A + KP L+I ADDV+C HG +++ LF
Sbjct: 333 QGKITVAPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAIDDELLF 392
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Y ARGI + A+ L+ +F E+IE ++R+ + + +G
Sbjct: 393 YLMARGIPPDEAKALLIQAFIGEIIEGAANEAVRDALTGALLGWLG 438
>gi|209885129|ref|YP_002288986.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
gi|209873325|gb|ACI93121.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
Length = 439
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 176/417 (42%), Gaps = 59/417 (14%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS-SQIQPITR 115
D ++ LP P+ R ++ + S P R+ E +++TD +++++ + + P+
Sbjct: 19 DVFAAARDRLPGEGPVATARKAAFEDFTSRGLPHRRIEEWKYTDLRALLRAVAPLAPVPG 78
Query: 116 PSSSLDVSTDA------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
++ + L L+DG + +L+ LP GV V SL + +
Sbjct: 79 DAALALAAKAQAAIGIENATRLTLVDGVLAPKLSDLALLPKGVRVRSL---RESLAAGAV 135
Query: 170 DFISEFQCGDLFWSINGMGAPDL-------GVI-----YVP------------------- 198
D + D S NG A D GVI Y+
Sbjct: 136 DLLKTTFAADAMISFNGAMATDGVLVEVDDGVILERPLYIAHVATASSASSVTRSKIAIG 195
Query: 199 ------------AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
A G Y + +++ +G +++H L + +AA+I A
Sbjct: 196 KKACVTLVESFVAAGATAYQVHDQVDISVGDDSELQHIRLMEDARDAANITTAAFTLGAR 255
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGY 304
++ G +SR+ + LG D+E + +LL + D + L+++H P
Sbjct: 256 VKLNTFGLNQGAAVSRYQGFISFLGEDSELSTNGVNLLGGRRHAD--TTLVVNHAVPNCT 313
Query: 305 CRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD 364
R++ + ++ ++VF G + V + AQ+TD +TR+LLL A + KP L+I ADD
Sbjct: 314 SREIFRAVLDDQ-SRSVFQGRIIVQQDAQKTDGKMMTRALLLSDEAEADNKPELEIFADD 372
Query: 365 VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
V C HGA L+E LFY +ARG+ A+ L+ +F E IE +R ++
Sbjct: 373 VACGHGATAGALDEELLFYLRARGLPENEAQSLLISAFVGEAIESIVDDGLRELAIT 429
>gi|410696126|gb|AFV75194.1| FeS assembly protein SufD [Thermus oshimai JL-2]
Length = 430
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
S E+++ G ++RH++++ H E +G + + GG+ +R V +
Sbjct: 211 SATEMLLRPGSRLRHAHVETFGQGVWHFHRQRALLERDAGLNDLVANLGGRCARSEVASE 270
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNV 326
LGP E+E+ + DQ D ++ L H + R L+K V +AVF G +
Sbjct: 271 LLGPGAESEMLGLYFAHGDQQFDHYT--LQHHVAHHTRSDLLYKGAVKDE-ARAVFSGLI 327
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
++ + AQ+TDA Q R+LLL P A V+ P L+I A+DV+C+HG+ + ++E QLFY Q+
Sbjct: 328 RLEKGAQKTDAYQANRNLLLSPTARVDSIPQLEIGANDVRCTHGSTTAPVDEMQLFYLQS 387
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
RG+ A++ LV + +V+ R P ++R +
Sbjct: 388 RGLPKALAQELLVKAHLGDVLSRIPLKALRAHL 420
>gi|410098740|ref|ZP_11293716.1| FeS assembly protein SufD [Parabacteroides goldsteinii CL02T12C30]
gi|409221201|gb|EKN14152.1| FeS assembly protein SufD [Parabacteroides goldsteinii CL02T12C30]
Length = 450
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 170/388 (43%), Gaps = 61/388 (15%)
Query: 89 WPSRKDEPFRFTDTSMI----KSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQ 139
+PS K E +++TD + I + P + DV P+L +++
Sbjct: 45 FPSVKSEDYKYTDVAQAFAPDYGVNINRLAIPVNPYDVFR-CDVPNLSTSLYFVVNDTFY 103
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
+ + ++LP+GVY G L ++ + + + + D ++N M A D V+YV
Sbjct: 104 DKMMPKAHLPEGVYAGGLKNFAEQYPEVAACYYGKAAKSSHDGIIALNTMLAQDGFVLYV 163
Query: 198 PAEG--------------------------------------------NDC-YWANSVLE 212
P EG +D + A V+E
Sbjct: 164 P-EGVAVERPIQLINIFRSDVDTMANRRILVIMEPRSEAKLLVCDHSIDDVKFLATQVVE 222
Query: 213 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 272
+ G+G + L+ S++ + V+QE +S + ++ L+R+N +++ G
Sbjct: 223 IFAGEGAYFDYYDLEESSISTSRFASVYVKQEASSNVLVNGITLNNGLTRNNYYIELNGE 282
Query: 273 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNRY 331
ET L ++ +Q D +S + P +L K ++ H++G F G + V
Sbjct: 283 YAETTLCGMSVMDHEQQVDTYSHITHAVPNCTSNELFKNVLDDHAVG--AFSGRILVKEG 340
Query: 332 AQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDL 391
AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ LFY ++RGI L
Sbjct: 341 AQKTAAFQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMRSRGIPL 400
Query: 392 ETARKALVFSFGAEVIERFPYPSIRNQV 419
AR L +F ++VI+ ++++++
Sbjct: 401 SEARMMLSVAFTSDVIDHVRLDALKDRL 428
>gi|83814449|ref|YP_445509.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
gi|83755843|gb|ABC43956.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
Length = 446
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 115/224 (51%), Gaps = 1/224 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N+V E +G+ + H +Q++ NA+ + A +QE S Y ++ G++ R+N
Sbjct: 221 FTNTVSEAFVGERANLEHYLVQDEGANASQVHTRAGQQEDDSVYSTNTITFSGEVVRNNA 280
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
++ G E+ L + + D H+++ P +L+K ++ + AVF+G
Sbjct: 281 TIEVNGSFCESNLYGLCIGKDEMHVDNHTQMNHVQPDCSSNELYKHVL-NDESTAVFNGK 339
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
V V R +Q+ DA Q +++L A + KP L+I ADDV CSHGA ++E +FY +
Sbjct: 340 VLVTRGSQRIDAYQQNDTIVLTTDANIYTKPELEIYADDVVCSHGATTGQVDEEGVFYLR 399
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
+RG+ A ++ +F EV+ + +RN + ++ G+
Sbjct: 400 SRGLSERRAHILMLQAFTDEVLSEYKIDGLRNYITDKIRRRFGS 443
>gi|148255359|ref|YP_001239944.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. BTAi1]
gi|146407532|gb|ABQ36038.1| Iron-regulated ABC transporter permease protein SufD
[Bradyrhizobium sp. BTAi1]
Length = 440
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 179/435 (41%), Gaps = 72/435 (16%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + +R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGAGKVADIRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
P ++ S +VL+DG + +L+ LP GV V +L + D
Sbjct: 69 PLAGTPDAAALARAKVAIASVAIDGATKIVLVDGVVALELSDLAALPSGVSVRTLRALLD 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAEGND---------CYWANSVLE- 212
+ + D S+N A D GV+ A+G A+ V
Sbjct: 129 EQSNESRGDLLLTKASDPMLSLNAALATD-GVVVTVADGVQLSSPLQLIHVATASKVARY 187
Query: 213 ----VVIGKGGK-------------------------------VRHSYLQNQSLNAAHIK 237
V+IG+G + + H L + + ++
Sbjct: 188 SRSHVLIGQGARAALVENSIAAEGAAAYQANDAAVIWVGDEAALSHVRLMRDATDVVNVS 247
Query: 238 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 297
S L +++GG +SR + G +E ++ +LL Q D+ L+
Sbjct: 248 SELFTVGAKSKLSLFNMTSGGAVSRLQAFITLAGEASELIVNGVNLLRDKQHGDMT--LV 305
Query: 298 LDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 352
+DH C R+ + ++ AHS VF G + V + AQQTD +TR+LLL A
Sbjct: 306 VDHAVPGCTSRENFRAVLDDRAHS----VFQGRIIVRQDAQQTDGKMMTRALLLSDEAEA 361
Query: 353 NVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPY 412
+ KP L+I ADDV C HGA L++S LFY QARG+ + A+ L+ +F E IE
Sbjct: 362 DSKPELEIFADDVSCGHGATAGALDDSLLFYLQARGLPEKQAQALLIQAFVGEAIEAIED 421
Query: 413 PSIRNQVVSHVKNLM 427
+R +V++ ++ +
Sbjct: 422 DDLRERVIAAAQDWL 436
>gi|170747131|ref|YP_001753391.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
gi|170653653|gb|ACB22708.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
Length = 440
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 101/219 (46%), Gaps = 5/219 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N L+VV+G RH+ L + + +++ E E V + TG LSRH + V
Sbjct: 218 NDALDVVVGPRAAFRHTRLNTEGDATIALSTLSLKVEAEGQVETVNLVTGAVLSRHQIFV 277
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKCIVAHSLGQAVFDGN 325
G DT ++ +L Q D S LL DH G R+ K I+ VF G
Sbjct: 278 HVAGEDTNLVVNGAAMLRKGQLAD--STLLADHAAVGGVGREQFKWIIDGD-ATGVFQGK 334
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V + AQQTD + LLL + KP L+I ADDV C HGA +E LFY
Sbjct: 335 IIVRQAAQQTDGKMKSDCLLLTDEGQMMNKPELEIFADDVACGHGATCGAPDEDLLFYLM 394
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
ARG+ TA LV +F E +E + R ++ ++
Sbjct: 395 ARGLPRATAESLLVQAFVGEAVEAVTHEGARAALIGAIE 433
>gi|114569868|ref|YP_756548.1| SufBD protein [Maricaulis maris MCS10]
gi|114340330|gb|ABI65610.1| Iron-regulated ABC transporter permease protein SufD [Maricaulis
maris MCS10]
Length = 342
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 1/175 (0%)
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
+ TG KLSR+ H+ G +L ++L + + D + + P +QL K V
Sbjct: 166 IDTGAKLSRNETHIYHPGQGATVDLGGAYVLAAGRHADTTTVVHHAGPGCQTKQLVKGAV 225
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
A S G VF G V+R AQQTDA R+L+L +A ++ KP L+I ADDV+C+HG A+
Sbjct: 226 A-SGGHGVFQGKFIVDRIAQQTDARMTHRALMLGEKAEIDAKPELEIYADDVQCAHGNAL 284
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
L+E+ LFY + RG+ AR L+ S+ AE ++ ++R ++ S ++ +G
Sbjct: 285 GTLDETALFYMRQRGLPEVKARALLIESYLAEPLDMISDEALREELKSILRQRLG 339
>gi|418054504|ref|ZP_12692560.1| FeS assembly protein SufD [Hyphomicrobium denitrificans 1NES1]
gi|353212129|gb|EHB77529.1| FeS assembly protein SufD [Hyphomicrobium denitrificans 1NES1]
Length = 444
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 119/222 (53%), Gaps = 5/222 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+ EV +GKG + H+ + H+ V + + Y + S+G L+R+ ++V
Sbjct: 220 NAQTEVTVGKGATLHHAKVAVDEGKCVHLADWDVSLDADATYRGFQFSSGLGLARNEINV 279
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 325
+ G + +LS ++ +++ D + L++DH C R+L K ++ G+ VF G
Sbjct: 280 RYTGQGGKLDLSGAYMARANEHID--TTLVVDHAVPACESRELFKGVL-DGHGRGVFQGK 336
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V AQ++D Q++++L+L A + KP L+I ADDV C HG ++L+ LFY +
Sbjct: 337 IIVQPDAQKSDGKQMSQALMLSEDAEFDSKPELEIFADDVVCGHGTTSAELDPDMLFYCR 396
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
+RGI AR ++ SF E I++ +P ++ ++ K+ +
Sbjct: 397 SRGIPESEARALMIESFIGEAIDKVEHPELQTALMKFAKSWL 438
>gi|404486685|ref|ZP_11021875.1| FeS assembly protein SufD [Barnesiella intestinihominis YIT 11860]
gi|404336503|gb|EJZ62964.1| FeS assembly protein SufD [Barnesiella intestinihominis YIT 11860]
Length = 449
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 188/432 (43%), Gaps = 74/432 (17%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-- 107
I L S ++ + S SS++ + LR+ + L S PS KDE R TD + S
Sbjct: 8 IDLYRSQKNLINSHSSAV-----MNGLREEAVALLESRGLPSLKDEEHRRTDIESVYSPD 62
Query: 108 -----SQIQPITRPSSSL--DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
+I P DV + V+ D F + S LPDGV VGSL +
Sbjct: 63 YGLNLGRIDIEINPYEVFRCDVPNLSTLLYFVVNDSFYKRVQPVSSKLPDGVLVGSLCDM 122
Query: 161 SDGIMKRVSDFISEF--QCGDL----FWSINGMGAPDLGVIYVP--------------AE 200
S + D +S + + D+ ++N A D +Y+P
Sbjct: 123 S----LQYPDLVSRYYGKVADMKRDGTVALNTAFAQDGFFLYIPDGVIVEKPIQLVNILR 178
Query: 201 GNDCYWANSVLEVVIGKGGKVR-----HS------YLQNQ-------------------- 229
GN + N L +V+GK + + HS +L +Q
Sbjct: 179 GNVDFMVNRRLLIVVGKRAQAKLLVCDHSDEATVKFLSSQVCEIFVDDDAVFDYYDIEES 238
Query: 230 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 289
S N + + VRQ S + + ++R+N + G ELS + ++D+
Sbjct: 239 SENTSKVSSVFVRQGERSNVLVNGIVLHNGVTRNNYYSAFEGE--HAELSLCGMAIADKG 296
Query: 290 QDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLE 347
Q + + +DH +C +L K ++ S + F G + V AQ+T+A Q ++L
Sbjct: 297 QVVDTYTHIDHAVPHCHSNELFKYVLNDS-ARGSFSGRILVRHGAQKTEAYQSNKNLCAS 355
Query: 348 PRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVI 407
P A + KP L+I ADDVKCSHGA + L+++ LFY ++RGI AR L+F+F +VI
Sbjct: 356 PLAKMYTKPQLEIYADDVKCSHGATVGQLDQNALFYMRSRGIPESEARMLLMFAFTNDVI 415
Query: 408 ERFPYPSIRNQV 419
E ++++++
Sbjct: 416 ELVRLDALKDRL 427
>gi|126695420|ref|YP_001090306.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9301]
gi|126542463|gb|ABO16705.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9301]
Length = 405
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 99/176 (56%), Gaps = 1/176 (0%)
Query: 241 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 300
V Q+ S Y L + + +R + ++Q + +T + + D+ ++++ D
Sbjct: 220 VIQQKNSEYNLGSLHSKFNYARFEIRIKQSEGNAKTNIKGMQITKKDEQISTYTKIDFDG 279
Query: 301 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQI 360
P G+ Q++K + A A+F+G++ V + AQ+TDA QL+R+LLL A ++ KP L+I
Sbjct: 280 PNGFLDQINKSL-ADDKSHAIFEGSIIVPKIAQKTDASQLSRNLLLSNLAQIDTKPQLEI 338
Query: 361 IADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
IADDVKC HGA IS L E +LFY + RGI L A K + S+ E+I P R
Sbjct: 339 IADDVKCKHGATISQLNEEELFYMRTRGITLTEASKLQLTSYFQEIISFIPVSKDR 394
>gi|146342290|ref|YP_001207338.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 278]
gi|146195096|emb|CAL79121.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 278]
Length = 441
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y N+ +++V+G ++ H + ++ +A HI + + + GG L R+
Sbjct: 216 YQVNTAMQLVVGDEARIDHIKVVSEGGSALHIGSLLANIGARATFNQLGFVAGGSLVRNQ 275
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP--RGYCRQLHKCIVAHSLGQAVF 322
+ V+ G T ++ LL Q D + L ++H G R+ K +V + +AVF
Sbjct: 276 LFVRLAGEGTVADIRGGSLLSGTQHAD--TTLSIEHAAENGQSRETFKAVVGDT-ARAVF 332
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V AQ+TDA ++R+LLL A + KP L+I ADDV+C HG +++ LF
Sbjct: 333 QGKITVAPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAIDDELLF 392
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Y ARGI A+ L+ +F E+IE ++R+ + + +G
Sbjct: 393 YLMARGIPPAEAKALLIQAFIGEIIEGAANEAVRDALTGALLGWLG 438
>gi|325281868|ref|YP_004254410.1| FeS assembly protein SufD [Odoribacter splanchnicus DSM 20712]
gi|324313677|gb|ADY34230.1| FeS assembly protein SufD [Odoribacter splanchnicus DSM 20712]
Length = 453
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 3/216 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ N+ EV +G + + +QNQ L A+ I V + S +E V+ G R+N
Sbjct: 216 FLINNTTEVYLGPNAHMEYYQVQNQHLGASQINSLFVSEHRNSTFESNLVTLYGGTIRNN 275
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR-QLHKCIVAHSLGQAVFD 323
++V E L + + + D+ Q + + +DH +C H V A F
Sbjct: 276 MYVALNEEGGECHL--YGMYIQDKKQIVDNFSYIDHIAPHCTSNEHFKGVLDDAALANFS 333
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G ++V AQ+T+A Q +LLL A +N KP L I ADDVKCSHGA + ++E +FY
Sbjct: 334 GCIRVRPDAQKTEAYQANNNLLLTDTARINAKPQLIIDADDVKCSHGATVGQIDEEAMFY 393
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
++RGI E AR ++F F ++I R +R ++
Sbjct: 394 LRSRGISPEEARMMMMFGFAHDIIRRVKLEPLRVKI 429
>gi|83858477|ref|ZP_00951999.1| hypothetical protein OA2633_03221 [Oceanicaulis sp. HTCC2633]
gi|83853300|gb|EAP91152.1| hypothetical protein OA2633_03221 [Oceanicaulis sp. HTCC2633]
Length = 366
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 1/218 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+AN L +V+ G ++ Q+ S +AA + + + + + G KL+R
Sbjct: 142 FANLTLVIVVMPGAELDRVIEQHASPDAALVVTSLIDLAPGAKLNQTTLGFGAKLARLET 201
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
HV G E +L ++L D S + + P G ++L K A + VF G
Sbjct: 202 HVSHAGEGAELQLDGAYVLDEGLHLDQTSLVRHEGPNGVTKELFKGAAARG-AKGVFQGK 260
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V + AQ+TDA R LLL+ +A ++ KP L+I ADDV C+HG A L+E LFY +
Sbjct: 261 IHVEQAAQKTDAQMQHRGLLLDDKAEIDAKPELEIYADDVVCAHGNAFGALDEDALFYMR 320
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
RG+ AR L SF AE IER R ++++ +
Sbjct: 321 QRGLPESKARALLTQSFLAEPIERIRDEDDRERLLARL 358
>gi|338740505|ref|YP_004677467.1| ABC transporter permease [Hyphomicrobium sp. MC1]
gi|337761068|emb|CCB66901.1| ABC transporter, permease; Fe-S cluster assembly protein
[Hyphomicrobium sp. MC1]
Length = 447
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 5/214 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y N+ L++ IG G + H + + + H+ V A+ Y ++ GG + R+
Sbjct: 222 YQCNNALDISIGAGACLDHVKIISDGARSLHVDTLTVAVGKAATYRDFCLTIGGAVVRNQ 281
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
+ V+ G + +L LL Q D + L+LDH C R++ K ++ + +F
Sbjct: 282 LFVRCTGSEASIDLRGASLLKGSQHAD--TTLVLDHAVANCQSREMFKSVLEDD-SRTIF 338
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V AQ+TDA +TR+LLL A + KP L+I ADDV+C HGA L++ F
Sbjct: 339 QGKIIVRPDAQKTDARMVTRALLLSETAEADSKPELEIFADDVQCGHGATAGALDDELKF 398
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
Y ARGI + A L+ SF E ++ S++
Sbjct: 399 YLMARGIPAKEAEALLIQSFVGEALDVVEAESLK 432
>gi|381191358|ref|ZP_09898868.1| SufD protein membrane protein [Thermus sp. RL]
gi|380450718|gb|EIA38332.1| SufD protein membrane protein [Thermus sp. RL]
Length = 339
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
S E+V+ G ++RH+++Q H E SG + V+ GG +R V +
Sbjct: 120 SATEMVLRPGARLRHAHVQTFGEGVWHFHRQRALLERDSGLNDLVVNLGGAYARSEVASE 179
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNV 326
+GP E+E+ + Q D ++ L H + R L+K V +AVF G +
Sbjct: 180 LVGPGAESEMLGLYFGHGRQQFDHYT--LQHHVEHHTRSDLLYKGAVKDE-ARAVFSGLI 236
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
+ + AQ+TDA Q R+LLL P A V+ P L+I A+DV+C+HG+ + ++E QLFY Q+
Sbjct: 237 XLEKGAQKTDAYQANRNLLLSPTARVDSIPQLEIGANDVRCTHGSTTAPVDEMQLFYLQS 296
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
RG+ A++ LV + A+V+ R P ++R +
Sbjct: 297 RGLPRGLAQELLVKAHLADVLSRIPLKALRAHI 329
>gi|154491950|ref|ZP_02031576.1| hypothetical protein PARMER_01580 [Parabacteroides merdae ATCC
43184]
gi|154088191|gb|EDN87236.1| FeS assembly protein SufD [Parabacteroides merdae ATCC 43184]
Length = 447
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 7/218 (3%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ G+G + L+ S++ V+QE S + ++ L+R+N
Sbjct: 212 FLATQVVEIFAGEGAFFDYYDLEESSMSTTRFASVHVKQEAGSNVLVNGITLNNGLTRNN 271
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA-HSLGQAV 321
+++ G E L +L +Q D +S + H YC +L K ++ H++G
Sbjct: 272 YYIELNGEQAEATLCGMSILDKEQQLDTYSHIT--HAVPYCTSNELFKNVLDDHAVG--A 327
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ L
Sbjct: 328 FSGRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDETAL 387
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
FY Q+RGI + AR L +F A+VI+ ++++++
Sbjct: 388 FYMQSRGIPRDEARMLLSVAFTADVIDYVRLDALKDRL 425
>gi|333029423|ref|ZP_08457484.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
gi|332740020|gb|EGJ70502.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
Length = 447
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 179/428 (41%), Gaps = 68/428 (15%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI---- 105
I L E + S+SS + + +LR ++ +P++K E F++TD +
Sbjct: 8 IDLFSQSEKVINSNSSVI-----MNRLRKNAISDFEKQGFPTKKLEDFKYTDVAKFFEPD 62
Query: 106 KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSAL-----NLSNLPDGVYVGSLLGV 160
++ + P++ D P+L I+ F+ N S +PDGV GSL +
Sbjct: 63 YGINLKRLNIPANP-DSVFKCDVPNLNTIECFMVNDVFYPEVRKQSLIPDGVVFGSLKDL 121
Query: 161 SDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYVP-------------------- 198
D V + + D ++N A D ++Y+P
Sbjct: 122 GDKYADIVEKYYGQLADTSKDAISALNTAFAQDGILLYIPKNVIIEEPIQLINLLRADVN 181
Query: 199 ----------------AEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAA 234
A+ C + + V E+ +G+ L+ A
Sbjct: 182 LMSNRRLLIILERGAQAKMLICNHAVDEVEFLSTGVTEIFVGENANFDFYELEETHTRTA 241
Query: 235 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 294
V Q+ S L ++ +R+ + V+ LG + + + D+ Q + +
Sbjct: 242 RFNNVFVSQDANSNVLLNNMTLHNGATRNTIEVKLLGEGAHIDCHG--MAIEDKNQHVDN 299
Query: 295 RLLLDH--PRGYCRQLHKCIVA-HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRAT 351
L+DH P +L K ++ HS+G F G V V AQ+T++ Q R+L + A
Sbjct: 300 TTLIDHVVPNCTSNELFKYVLDDHSVG--AFTGLVLVRPDAQKTNSQQTNRNLCVTKDAR 357
Query: 352 VNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+ +P L+I ADDVKC HGA + L+E+ LFY +ARGI AR L+F+F EVI+
Sbjct: 358 MYARPQLEIYADDVKCGHGATVGQLDETALFYMRARGISKHEARLLLMFAFVNEVIDTIS 417
Query: 412 YPSIRNQV 419
++++++
Sbjct: 418 IEALKDRL 425
>gi|162606194|ref|XP_001713612.1| hypothetical protein GTHECHR1114 [Guillardia theta]
gi|13794532|gb|AAK39907.1|AF165818_115 hypothetical protein [Guillardia theta]
Length = 467
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 3/215 (1%)
Query: 192 LGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA-VRQETASGYE 250
+I + D Y+ NS + + + + + N S+ +++I T V S +
Sbjct: 233 FNLINTSTKKEDIYFENSCINFYLKENSNLVLQNINN-SVGSSNIMNTIHVDLNKGSFFT 291
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 310
+S GG R N+ V GP+++ +L+ + ++ D+HSR+ + P Q K
Sbjct: 292 FNSISFGGDFERINIGVDMNGPESQCKLNGVFINHQNKIADIHSRISHNFPNCKSSQFQK 351
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
I+ ++ A+F G +++ A+ ++A QL R+L+L P++ ++ P L+I ++VKCSHG
Sbjct: 352 NIL-NNFSHAIFAGKIQIQFGAENSEAEQLCRTLMLSPKSRIDSIPILEINNENVKCSHG 410
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAE 405
A +SD+++ Q+FY +RGI+ + A+ L+ F E
Sbjct: 411 ATVSDIDDEQMFYLISRGIEKKIAQLILIKGFINE 445
>gi|397620657|gb|EJK65832.1| hypothetical protein THAOC_13270 [Thalassiosira oceanica]
Length = 696
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 222 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 281
R LQN + A + T S L+E+S G+ SR + L P ++ F
Sbjct: 471 RRPALQNSNFQAFDVHVTGDSGSFQS--SLMELSGNGR-SRVAISTALLRPGASVSINGF 527
Query: 282 HLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLT 341
L Q D+ + + RQ + +V A F G ++V + AQQTD+ QL+
Sbjct: 528 ALSGGAQRTDMRTNIHHMAQGTISRQEQRNMVG-GRSTASFRGRIRVEQSAQQTDSEQLS 586
Query: 342 RSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFS 401
R++LL A + P+L+IIADDV+C+HGA +SDL E +LFY ++RG+DL TAR L+++
Sbjct: 587 RTVLLSDNARIWATPSLEIIADDVQCTHGATVSDLSEEELFYLRSRGLDLPTARNMLMYA 646
Query: 402 FGAEV 406
F E+
Sbjct: 647 FVEEI 651
>gi|387907352|ref|YP_006337688.1| FeS assembly protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582245|gb|AFJ91023.1| FeS assembly protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 430
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ NSV E+ + + +QN + + I T ++Q+ S + S G R+N+
Sbjct: 206 FINSVSEIYAMDCSVIDYYKIQNDLVETSIIDNTFLKQKNNSKCTVYTFSLQGNFIRNNL 265
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFD 323
+ G T + L +L Q D H+ L+DH Y QL+K I+ + +F+
Sbjct: 266 NFYSNGKKTYSYLYGISILSGKQLVDHHT--LIDHLCSDSYSFQLYKNILCEK-SKGIFN 322
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + VN + ++ +A Q +++L A + KP L+I ++ VKCSHG + +++ES+LFY
Sbjct: 323 GKIIVNEFIKEINAFQKNHNIILSNEACIYTKPQLKIYSEYVKCSHGCTVGNIQESELFY 382
Query: 384 FQARGIDLETARKALVFSFGAEV--------IERFPYPSIRNQVVSHV 423
Q+RGI + A+ L+FSF E+ +++F + IR ++ H+
Sbjct: 383 LQSRGISEKKAKMLLLFSFLEEMLVPIHIFELKKFIHKKIREKLNKHL 430
>gi|289805590|ref|ZP_06536219.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 273
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 5/147 (3%)
Query: 257 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 314
G + RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 130 GAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVS 187
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
G+AVF+G + V +++ +TD +LLL A V+ KP L+I ADDVKCSHGA I
Sbjct: 188 DK-GRAVFNGLINVAQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIG 246
Query: 375 DLEESQLFYFQARGIDLETARKALVFS 401
+++ Q+FY Q+RGI + AR ++++
Sbjct: 247 RIDDEQMFYLQSRGIRQQEARHMILYA 273
>gi|158422670|ref|YP_001523962.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158329559|dbj|BAF87044.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 444
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 5/219 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ N L +++G ++ H + + H+ + + + GG R+
Sbjct: 218 HQVNVALGLLVGDKAQLDHVKVTGEGSAVLHVGSLVASVGAQARFGSCGFTLGGATVRNQ 277
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVF 322
++V+ +G TE L+ LL Q D + L L H P R++ K +V +A F
Sbjct: 278 LYVRLVGETTELNLAGASLLCGKQHAD--TALFLTHAAPGSTSREVFKAVV-DDKAEAAF 334
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V + AQQTDA ++R+LLL A KP L+I ADDV+C HGA + L+E F
Sbjct: 335 QGRITVEQAAQQTDARMMSRALLLSEEAEAYSKPELEIFADDVQCGHGATVGTLDEQLKF 394
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
Y +ARGI + A L+ +F EV++ + +R + +
Sbjct: 395 YLKARGIPAKEAEALLIQAFIGEVLDGIAHEGVREALTA 433
>gi|423724401|ref|ZP_17698546.1| FeS assembly protein SufD [Parabacteroides merdae CL09T00C40]
gi|409237382|gb|EKN30181.1| FeS assembly protein SufD [Parabacteroides merdae CL09T00C40]
Length = 447
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ G+G + L+ S++ V+QE S + ++ L+R+N
Sbjct: 212 FLATQVVEIFAGEGAFFDYYDLEESSMSTTRFASVHVKQEAGSNVLVNGITLNNGLTRNN 271
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFD 323
+++ G E L +L +Q D +S + P +L K ++ H++G F
Sbjct: 272 YYIELNGEQAEATLCGMSILDKEQQLDTYSHITHAVPHCTSNELFKNVLDDHAVG--AFS 329
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ LFY
Sbjct: 330 GRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDETALFY 389
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Q+RGI + AR L +F A+VI+ ++++++
Sbjct: 390 MQSRGIPRDEARMLLSVAFTADVIDYVRLDALKDRL 425
>gi|423347742|ref|ZP_17325428.1| FeS assembly protein SufD [Parabacteroides merdae CL03T12C32]
gi|409216102|gb|EKN09090.1| FeS assembly protein SufD [Parabacteroides merdae CL03T12C32]
Length = 447
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ G+G + L+ S++ V+QE S + ++ L+R+N
Sbjct: 212 FLATQVVEIFAGEGAFFDYYDLEESSMSTTRFASVHVKQEAGSNVLVNGITLNNGLTRNN 271
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFD 323
+++ G E L +L +Q D +S + P +L K ++ H++G F
Sbjct: 272 YYIELNGEQAEATLCGMSILDKEQQLDTYSHITHAVPHCTSNELFKNVLDDHAVG--AFS 329
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ LFY
Sbjct: 330 GRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDETALFY 389
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Q+RGI + AR L +F A+VI+ ++++++
Sbjct: 390 MQSRGIPRDEARMLLSVAFTADVIDYVRLDALKDRL 425
>gi|16126104|ref|NP_420668.1| hypothetical protein CC_1861 [Caulobacter crescentus CB15]
gi|221234874|ref|YP_002517310.1| SufD protein [Caulobacter crescentus NA1000]
gi|13423304|gb|AAK23836.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964046|gb|ACL95402.1| SufD protein [Caulobacter crescentus NA1000]
Length = 342
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 148/343 (43%), Gaps = 21/343 (6%)
Query: 90 PSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDG-FIQNSALNLSN 147
PSR+DE +R+TD ++K+ P P+ +V F L + F+ + S+
Sbjct: 16 PSRRDEDWRWTDLRGLLKA---LPPAAPAHDGEVPA-GPFAGLAAAETVFVNGRRMTASD 71
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAEGN-DCYW 206
GV + +SD + S I + G+ V+ EG Y
Sbjct: 72 AASGVVALRFVALSDKAAQGASHVIV-VKPGESL------------VLLESHEGRAGAYV 118
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
++ L++ +G+G + L + A ++ V + + ++ G + R
Sbjct: 119 SDVALDIAVGEGASLERIVLVDDDAEAVNVVTAEVTLAPGAKFAQTVLTGGARRQRIETR 178
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 326
V+ G E L +LL + + DL S + G QL K +V + VF G +
Sbjct: 179 VRHPGAHAEVRLDGAYLLDAQRHADLTSVVTHGGLDGVTSQLTKGMVTDQ-ARGVFQGRI 237
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
V + A QTDA +L+L +A ++ KP L I ADDV C+HG I L++ LFY +
Sbjct: 238 VVEKGADQTDARMGHHALILSDKAEIDAKPELLIFADDVSCAHGNTIGALDDEVLFYAKQ 297
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 429
RGI A+ L +F EVIER + R + V +G+
Sbjct: 298 RGIPEAEAKAMLTVAFVGEVIERIAHEGARELAAAWVARKLGS 340
>gi|407720684|ref|YP_006840346.1| hypothetical protein BN406_01475 [Sinorhizobium meliloti Rm41]
gi|407318916|emb|CCM67520.1| hypothetical protein BN406_01475 [Sinorhizobium meliloti Rm41]
Length = 425
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ +SV +V + G V LQ Q H+ + L ++ GGKL R +
Sbjct: 200 FVSSVSDVTLADGADVIWIILQQQGPADTHLGQIRFDLGKDAKLHLFVINAGGKLVRQEL 259
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
H + G ++ L +LL D DL L D P ++ + +V + VF G
Sbjct: 260 HGRASGEGSDLTLRGINLLGGDSHTDLTFTLSHDVPHTTSSEIIRNVV-FDRAKGVFQGK 318
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V + AQ+TDA +LLL A + KP L+I ADDV+C HGA + D++ +QLFY
Sbjct: 319 ILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQCGHGATVIDIDHTQLFYLL 378
Query: 386 ARGIDLETARKALVFSFGAEVIERF 410
ARGI AR LV +F AE++E
Sbjct: 379 ARGIPENKARAMLVNAFVAEIVEEL 403
>gi|15965486|ref|NP_385839.1| hypothetical protein SMc00532 [Sinorhizobium meliloti 1021]
gi|334316369|ref|YP_004548988.1| FeS assembly protein SufD [Sinorhizobium meliloti AK83]
gi|384529553|ref|YP_005713641.1| FeS assembly protein SufD [Sinorhizobium meliloti BL225C]
gi|384536116|ref|YP_005720201.1| putative FeS assembly protein [Sinorhizobium meliloti SM11]
gi|418402480|ref|ZP_12975992.1| FeS assembly protein SufD [Sinorhizobium meliloti CCNWSX0020]
gi|433613517|ref|YP_007190315.1| FeS assembly protein SufD [Sinorhizobium meliloti GR4]
gi|15074667|emb|CAC46312.1| Putative FeS assembly protein [Sinorhizobium meliloti 1021]
gi|333811729|gb|AEG04398.1| FeS assembly protein SufD [Sinorhizobium meliloti BL225C]
gi|334095363|gb|AEG53374.1| FeS assembly protein SufD [Sinorhizobium meliloti AK83]
gi|336033008|gb|AEH78940.1| putative FeS assembly protein [Sinorhizobium meliloti SM11]
gi|359503614|gb|EHK76164.1| FeS assembly protein SufD [Sinorhizobium meliloti CCNWSX0020]
gi|429551707|gb|AGA06716.1| FeS assembly protein SufD [Sinorhizobium meliloti GR4]
Length = 425
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ +SV +V + G V LQ Q H+ + L ++ GGKL R +
Sbjct: 200 FVSSVSDVTLADGADVIWIILQQQGPADTHLGQIRFDLGKDAKLHLFVINAGGKLVRQEL 259
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
H + G ++ L +LL D DL L D P ++ + +V + VF G
Sbjct: 260 HGRASGEGSDLTLRGINLLGGDSHTDLTFTLSHDVPHTTSSEIIRNVV-FDRAKGVFQGK 318
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V + AQ+TDA +LLL A + KP L+I ADDV+C HGA + D++ +QLFY
Sbjct: 319 ILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQCGHGATVIDIDHTQLFYLL 378
Query: 386 ARGIDLETARKALVFSFGAEVIERF 410
ARGI AR LV +F AE++E
Sbjct: 379 ARGIPENKARAMLVNAFVAEIVEEL 403
>gi|227822093|ref|YP_002826064.1| ABC transporter permease [Sinorhizobium fredii NGR234]
gi|227341093|gb|ACP25311.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Sinorhizobium fredii NGR234]
Length = 425
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 35/390 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK-------- 106
+L D+ + LP + LRD+ L + P+R+ E + +TD +
Sbjct: 15 ALVDAYTAQIGDLPGDGAVLSLRDTLVYELKTAGLPTRRVESWHYTDLRTLLRAVPSADP 74
Query: 107 ---SSQIQPITRPSSSLDV-STDAQFPSL-----------VLIDG------FIQNSALNL 145
+ +++PI ++ L V + +A SL LIDG + S +
Sbjct: 75 SAFADRVEPIVAGATVLSVRNGEADLKSLPEGVTARSYTESLIDGSAVAGLAVLGSDDAI 134
Query: 146 SNLPDGVYVGSL-LGVSDGIMKRVSDFI----SEFQCGDLFWSINGMGAPDLGVIYVPAE 200
+ G+ G L + V++G+ I S Q F G G+ + +
Sbjct: 135 GRINGGLVRGGLEIAVAEGVELEAPLEIQVAQSHGQAHTRFPVSFGAGSKATVLERHLST 194
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
D + +SV +V + +G V LQ Q H+ + + ++ GGKL
Sbjct: 195 NGDASFVSSVSDVTLAEGADVIWIILQQQGPADTHLGQIRFDLAKDAKLHVFVINAGGKL 254
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
R +H + G + L +LL + D+ L D P ++ + +V +
Sbjct: 255 VRQELHGRASGEGADLTLRGINLLGGESHTDVTFTLSHDVPHTTSSEIIRNVV-FDRAKG 313
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G + V + AQ+TDA +LLL A + KP L+I ADDV+C HGA + D++ +Q
Sbjct: 314 VFQGKILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQCGHGATVIDIDHTQ 373
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERF 410
LFY +RGI AR LV +F AE++E
Sbjct: 374 LFYLLSRGIPENKARAMLVNAFVAEIVEEL 403
>gi|430003785|emb|CCF19576.1| putative iron-sulfur cluster assembly protein [Rhizobium sp.]
Length = 425
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 5/211 (2%)
Query: 202 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 261
D + +S+ ++ + +G V LQ Q + H+ VR + +L V+ GGKL
Sbjct: 197 GDAAFISSISDLTLEEGADVVWVILQEQGADDTHLGQIRVRFAAEAKLKLFVVNVGGKLV 256
Query: 262 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQ 319
R + + G +E L +LL + D+ L+L H P ++ + +V +
Sbjct: 257 RQELRIDVEGEGSELTLRGVNLLGQETHTDV--TLVLGHNVPHTSSTEIIRNVV-FDRAR 313
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
VF G ++V AQ+TDA +LLL +VKP L+I ADDV C HGA ++D++++
Sbjct: 314 GVFQGMIRVAPDAQKTDAKMACNTLLLTDDGEFSVKPELEIFADDVVCGHGATVTDIDKN 373
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERF 410
L+Y ++RGI AR LV +F AE++E
Sbjct: 374 HLYYLRSRGIPENVARAMLVNAFVAEIVEEL 404
>gi|328951403|ref|YP_004368738.1| FeS assembly protein SufD [Marinithermus hydrothermalis DSM 14884]
gi|328451727|gb|AEB12628.1| FeS assembly protein SufD [Marinithermus hydrothermalis DSM 14884]
Length = 443
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 120/214 (56%), Gaps = 7/214 (3%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHI-KWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
SV E+++ G +RH+ +Q+ H + A+ ++ A +LV + GG LSR V
Sbjct: 224 SVSELLLHPGAILRHANVQSWGRGVHHFHRQRALLEKDARLNDLV-ATFGGTLSRAEVQS 282
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHS--RLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ +GP ++E+ + +DQ D ++ + DH R L+K A + V+ G
Sbjct: 283 ELVGPGADSEMLGIYFAHADQHFDHYTLQHHVADHARSDV--LYKG-AAKDRARTVYSGL 339
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+++ AQ+TDA Q R+LLL P A + P L+I A+DV+CSHG++ + ++E+Q+ Y
Sbjct: 340 IRLEPGAQKTDAYQTNRNLLLSPEARSDSVPQLEIAANDVRCSHGSSTAPVDETQVLYLM 399
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+RG+ A + LV +F A+V+ R P P++R +
Sbjct: 400 SRGLPRTLAEQLLVKAFLADVLTRIPLPALRQHL 433
>gi|56459263|ref|YP_154544.1| cysteine desulfurase [Idiomarina loihiensis L2TR]
gi|56178273|gb|AAV80995.1| Cysteine desulfurase activator SufB [Idiomarina loihiensis L2TR]
Length = 416
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 166/393 (42%), Gaps = 64/393 (16%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ----------PITRPSSSLDV 122
L +R + TL WP+R+ E +R+T + +++ P+ +SLD
Sbjct: 19 LSPVRAQALDTLKQQQWPTRRTEAWRYTSLHPVADLELKSSTGNATAEAPVIEGLNSLD- 77
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL--------------------LGVSD 162
LV +DG + L LP+G+ + L G+ +
Sbjct: 78 --------LVFVDGQLSTDISKLK-LPEGITISELSAPSEPAEAIFAQVKPSRHLFGLVN 128
Query: 163 GIMKR---VSDFISEFQCGDLFWSIN----------------GMGAPDLGVIYVPAEGND 203
++ + V D + + +N G A + + GN
Sbjct: 129 DVLAQQGVVIDIAAGAKVEQPIRIVNFASAGIESHQRTLVRVGENAQATIIEHGSGSGNS 188
Query: 204 CYWANSVL-EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 262
N+V E I + ++ H A HI + + + + G +L+R
Sbjct: 189 L---NTVFAEYDIAEKARLEHYRFALHEGEAIHIGGSHFKLHDHARLNSTLIGYGSQLTR 245
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 322
+V ++ G + ++ +LL Q DLHS + P G + + I+ +AVF
Sbjct: 246 LDVDIEHAGEHAFAKFNNVYLLAPRQHFDLHSTIEHASPNGTTEENARGIIG-DRAKAVF 304
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
+G + ++R+AQ+T A R+LLL A +N KP L+I ADDV+C+HGA +++++E L+
Sbjct: 305 NGRIHIHRHAQKTLAELNNRNLLLTRGAQINTKPELEIYADDVQCAHGATVAEIDEEALY 364
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
Y RGID + A L F F E++ + P ++
Sbjct: 365 YMLTRGIDRQQALVMLNFGFVQEMVFQMPNKAL 397
>gi|254515561|ref|ZP_05127621.1| FeS assembly protein SufD [gamma proteobacterium NOR5-3]
gi|219675283|gb|EED31649.1| FeS assembly protein SufD [gamma proteobacterium NOR5-3]
Length = 430
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 25/327 (7%)
Query: 98 RFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL 157
RF D S ++ +I ++SLDV D F +ALN + L DGV+V
Sbjct: 101 RFDDASEAQADRIAE--HLNTSLDVE-DHLF------------AALNTATLRDGVFVEIA 145
Query: 158 LGVS-DG---IMKRVSDFISEFQCGDLFWSINGMGAPDLGVI-YVPAEGNDCYWANSVLE 212
S D ++ VS + + GA V +V + + + N + E
Sbjct: 146 ANASVDAPVEVLYLVSAAAAPIAINQRLLVLAQTGACATIVEHFVSLDAANESFCNGMTE 205
Query: 213 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 272
+++ ++ H + +S NA HI R + + E ++ G L R ++ V GP
Sbjct: 206 LLLAPNARLSHYRIHEESGNAVHIGGVHARLDRDAHLESFHLALGSVLKRFDLVVNHAGP 265
Query: 273 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 330
L+ +L D+ D H+ ++H +C ++ + I+A AVF+G + ++
Sbjct: 266 GAYASLNGVYLPRGDEHIDYHT--TIEHAVPHCDTDEVFRGIIA-DRATAVFNGRIHIHP 322
Query: 331 YAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGID 390
AQ+T A ++LL A +N KP L+I ADDV+C+HGA ++ L+E + Y + RG+
Sbjct: 323 DAQKTRAELSNKNLLTSAEAQINSKPELEIYADDVQCAHGATVAQLDELAMHYLRTRGVS 382
Query: 391 LETARKALVFSFGAEVIERFPYPSIRN 417
+ A L F F E+IE +RN
Sbjct: 383 RDEAEVMLSFGFINELIEALKLEPLRN 409
>gi|294054747|ref|YP_003548405.1| FeS assembly protein SufD [Coraliomargarita akajimensis DSM 45221]
gi|293614080|gb|ADE54235.1| FeS assembly protein SufD [Coraliomargarita akajimensis DSM 45221]
Length = 431
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 5/174 (2%)
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ--LHKC 311
V+ G + +R + GP + ++ + L V+++ Q+ R H G L+K
Sbjct: 254 VNIGAERARFENQTRIEGPGADVKM--YSLTVAEEKQEFDQRTFQTHNAGNAVSDLLYKN 311
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 371
+ S + +F G +KV AQQTDA Q R+LLL+P A N P L+I+A+DVKCSHGA
Sbjct: 312 ALLDS-SRTIFSGLIKVAEGAQQTDAYQTNRNLLLDPTAEANALPGLEILANDVKCSHGA 370
Query: 372 AISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN 425
+++E +LFY RGI TA + +VF F EVIE+ + + + + ++N
Sbjct: 371 TTGNVDEEELFYMMQRGIHKRTAMQLMVFGFFEEVIEKVDSDELADNLRTLIRN 424
>gi|90407346|ref|ZP_01215531.1| hypothetical protein PCNPT3_03892 [Psychromonas sp. CNPT3]
gi|90311497|gb|EAS39597.1| hypothetical protein PCNPT3_03892 [Psychromonas sp. CNPT3]
Length = 410
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAH 315
G L RH+ + G ++ + S L QT D SR L+H YC+ Q+HK IV
Sbjct: 237 GDLIRHHTSSRLKGENSHLSMHSLSLPKGKQTYD--SRTYLEHQATYCQSLQIHKFIVQD 294
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
VF+G +KV + A +TDA +LLL +N KP L+I ADDVKCSHG
Sbjct: 295 Q-AVGVFNGMIKVAKDAIKTDAQMQDHNLLLSDTCQINSKPQLEIYADDVKCSHGCTTGT 353
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV-KNL 426
L + Q+FY Q+RGI + A+K L +F + + +++ VV+H+ KNL
Sbjct: 354 LNKEQIFYMQSRGISQKRAKKILTLAFAMALTDLIKVSDLKDFVVAHIDKNL 405
>gi|88706201|ref|ZP_01103908.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
gi|88699595|gb|EAQ96707.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
Length = 435
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+ N + E+++G ++ H + +S +A HI R + + E ++ G L R ++
Sbjct: 204 FCNGLTELMLGPNARLSHYRIHEESGSAVHIGGVHARLDRDAHLESFHLALGSVLKRFDL 263
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
+ GP L+ +L D+ D HS + P ++ + I+A AVF+G
Sbjct: 264 VINHAGPGAYASLNGVYLPRGDEHIDYHSTIEHAVPHCSSDEIFRGIIADK-ATAVFNGR 322
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ ++ AQ+T A R+LL P ATVN KP L+I ADDV+C+HG ++ L+E+ + Y +
Sbjct: 323 IHIHPDAQKTRAELSNRNLLTSPEATVNSKPELEIYADDVQCAHGTTVAQLDETAMHYLR 382
Query: 386 ARGIDLETARKALVFSFGAEVIE 408
RG+ A L F F E+I+
Sbjct: 383 TRGVSQAEAEVMLSFGFINELID 405
>gi|294852287|ref|ZP_06792960.1| FeS assembly protein SufD [Brucella sp. NVSL 07-0026]
gi|294820876|gb|EFG37875.1| FeS assembly protein SufD [Brucella sp. NVSL 07-0026]
Length = 425
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 170/403 (42%), Gaps = 58/403 (14%)
Query: 53 AES-LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AES L DS LP + RD++ + L PSR+ E + +TD +
Sbjct: 15 AESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTD--------FR 66
Query: 112 PITRPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYV---------GSLLG 159
+ + ++ D S Q P+L+ I N + P GV + GSL+
Sbjct: 67 TLLKGVAAFDTSAGTQALPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVS 126
Query: 160 ------------------VSDGIMKRVSD-----------FISEFQCGDLFWSINGMGAP 190
VSDG M ++D I G + + +GA
Sbjct: 127 QLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVR-IGAN 185
Query: 191 DLGVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 249
G I G + ++ SV V +G G ++ L++ A + V S
Sbjct: 186 VKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFG-QATQLSQFNVTIGKGSRL 244
Query: 250 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL--LLDHPRGYCRQ 307
L V+ GGKL R VHV G D++ EL +LL D+ + L+++ R +
Sbjct: 245 TLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADGSHTDVTMTVGHLVENTR--STE 302
Query: 308 LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKC 367
+ + +V + VF G ++V + AQ+TDA +LLL + KP L+I ADDV C
Sbjct: 303 IVRNVVKDR-ARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVAC 361
Query: 368 SHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA +++L LFY ARGI AR L+ +F AE+IE
Sbjct: 362 GHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEEL 404
>gi|167764128|ref|ZP_02436255.1| hypothetical protein BACSTE_02511 [Bacteroides stercoris ATCC
43183]
gi|167698244|gb|EDS14823.1| FeS assembly protein SufD [Bacteroides stercoris ATCC 43183]
Length = 447
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 162/389 (41%), Gaps = 63/389 (16%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + ++++ P SL + D F
Sbjct: 42 FPTRKTEKYKYTDVSKFFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEMAEQRPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PA-------------------------------EGNDC-------------YWANSVLEV 213
P EG + A V+EV
Sbjct: 161 PKNVVVEKPIQLVNILRGDVNFMVNRRVLIILEEGAQARLLACDHAMDSVNFLATQVVEV 220
Query: 214 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 273
+G+ L+ + I VRQE S L ++ +R+ V G
Sbjct: 221 FVGENATFDFYELEETHTSTVRINSLYVRQEANSNVLLNGMTLHNGTTRNTTEVTLAGEG 280
Query: 274 TETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 330
E L + V+D+ Q + + +DH P +L K ++ S+G F G V V
Sbjct: 281 AELNLCG--MAVADKNQHVDNNTTIDHAVPNCTSNELFKYVLDDQSVG--AFAGLVLVRP 336
Query: 331 YAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGID 390
AQ T + Q R+L A + +P L+I ADDVKCSHGA + L+ES LFY Q RGI
Sbjct: 337 GAQHTSSQQTNRNLCATREAHMYTQPQLEIYADDVKCSHGATVGQLDESALFYMQQRGIS 396
Query: 391 LETARKALVFSFGAEVIERFPYPSIRNQV 419
+ AR L+F+F EVI+ ++++++
Sbjct: 397 VHEARLLLMFAFVNEVIDTIRLDALKDRL 425
>gi|150396679|ref|YP_001327146.1| FeS assembly protein SufD [Sinorhizobium medicae WSM419]
gi|150028194|gb|ABR60311.1| FeS assembly protein SufD [Sinorhizobium medicae WSM419]
Length = 425
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 165/390 (42%), Gaps = 35/390 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK-------- 106
+L D+ + LP + LRD+ L ++ P+R+ E + +TD +
Sbjct: 15 ALVDAYTAQIGDLPGDGAVLSLRDTLVHELKTSGLPTRRVEAWHYTDLRTLLRAVPAADP 74
Query: 107 ---SSQIQPITRPSSSLDVSTD----AQFPSLVLIDGFIQN-----SALNLSNLPDGVYV 154
+ ++ P+ SS L V P + + + ++ +A LS L +
Sbjct: 75 TAFAERVDPLVPGSSVLSVRNGQADIKNVPEQLTVRSYTESLLDGSAAAGLSVLGADDAI 134
Query: 155 GSLLG--VSDGIMKRVSDFI------------SEFQCGDLFWSINGMGAPDLGVIYVPAE 200
G + G V G+ V+ + S Q F G GA + +
Sbjct: 135 GRINGGLVRGGLEIAVAAGVEIEAPVEIQVVQSHGQAHTRFPVSFGAGAKATVIERHLST 194
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
+ + +SV +V + +G V LQ Q H+ + L ++ GGKL
Sbjct: 195 NAEQSFVSSVSDVTLAEGADVIWIILQQQGPADTHLGQIRFDLGKDAKLHLFVINAGGKL 254
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
R +H + G + L +LL + DL L D P ++ + +V +
Sbjct: 255 VRQELHGRATGEGADLTLRGINLLGGESHTDLTFTLSHDVPHTTSSEIIRNVV-FDRAKG 313
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G + V + AQ+TDA +LLL A + KP L+I ADDV+C HGA + D++ +Q
Sbjct: 314 VFQGKILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQCGHGATVIDIDHTQ 373
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERF 410
LFY ARGI AR LV +F AE++E
Sbjct: 374 LFYLLARGIPENKARAMLVNAFVAEIVEEL 403
>gi|330997786|ref|ZP_08321621.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
gi|329569674|gb|EGG51439.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
Length = 447
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 175/407 (42%), Gaps = 63/407 (15%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVS 123
+ L LRD + + +P++K E +++TD S + ++++ P +
Sbjct: 24 VALNALRDKAFEDFTRQGFPTQKVERYKYTDVSAAFAPDYGLNLNRVEFPVNPYEAFRCD 83
Query: 124 TDAQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC--GD 179
SL + D F + AL + LP+GV V SL ++ RVS + D
Sbjct: 84 VPNLSTSLYFMVNDSFYR-KALPAAALPEGVVVCSLKQAAEDYPDRVSACYGKLARTEKD 142
Query: 180 LFWSINGMGAPDLGVIYVPA--------------EGNDCYWANSVLEVVIGKGGKVR--- 222
++N M D IYVP + AN + VV+ + +VR
Sbjct: 143 AINALNTMLVQDGLFIYVPRGVVVERTLQVVNILRSDVDLMANRRVLVVLEENAQVRLLF 202
Query: 223 ----------------------HSYLQNQSLNAAHIKW-----TAVRQETASGYELVEVS 255
++ L+ L H+K VRQ+ S L ++
Sbjct: 203 CDHAMDDRNFLTTQVVEVFAAENTRLELYELEETHVKNRRFSNMYVRQQRGSVVNLYNIT 262
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 313
+R+ + G E+ L L+++D+ Q + + L+DH G+C QL+K ++
Sbjct: 263 LHNGQTRNRTDLVLDGEGAESNLCG--LVIADKEQRVDNNTLIDHRAGHCTSNQLYKYVM 320
Query: 314 -AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAA 372
S+G F G + V + AQ T + + +L A + +P L+I ADDVKCSHG+
Sbjct: 321 DERSVG--AFAGRILVRQGAQHTVSNERNANLCATKEARMYSQPMLEIYADDVKCSHGST 378
Query: 373 ISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+ L E LFY Q RGI E A+ L F+F EVI+ ++R+++
Sbjct: 379 VGQLNEQALFYMQQRGISREEAQMLLKFAFAGEVIDAISLEALRDRL 425
>gi|85716313|ref|ZP_01047286.1| FeS assembly protein SufD [Nitrobacter sp. Nb-311A]
gi|85696829|gb|EAQ34714.1| FeS assembly protein SufD [Nitrobacter sp. Nb-311A]
Length = 440
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 11/211 (5%)
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
IG G +++H L + +AA+I V + + + ++ G +SR+ ++ G +
Sbjct: 225 IGDGAELQHVRLVEDAHDAANISTAIVTIGAKARFNSLNLTCGAAVSRYQGFIKFGGEGS 284
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVN 329
+++ +LL Q D + L+LDH +C ++ + ++ AHS VF G + V
Sbjct: 285 HADVNGVNLLNGHQHGD--TTLVLDHAVPHCSSNEVFRAVLDDQAHS----VFQGKIIVQ 338
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
AQ+TD +TR+LLL A + KP L+I ADDV C HGA + L+ES LFY +ARG+
Sbjct: 339 PDAQKTDGKMMTRALLLSDGAEADNKPELEIFADDVTCGHGATVGALDESLLFYLRARGL 398
Query: 390 DLETARKALVFSFGAEVIERFPYPSIRNQVV 420
+ A+ L+ +F E +E +R+ V+
Sbjct: 399 SEKEAQALLIQAFVGEAVESVADDGLRDVVI 429
>gi|148555824|ref|YP_001263406.1| SufBD protein [Sphingomonas wittichii RW1]
gi|148501014|gb|ABQ69268.1| SufBD protein [Sphingomonas wittichii RW1]
Length = 360
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 155/359 (43%), Gaps = 49/359 (13%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLP 149
PS ++E +R++D S +++ + P T + LD P L+ +DG + + P
Sbjct: 6 PSTREEAWRWSDLSGLEALSVAPATGAAGDLDSHWIGDGPRLLFVDGRLDAG----RSRP 61
Query: 150 DGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFW--SINGMGAPDLGVI-----------Y 196
V VG++ S + R++ GD W +++ GA G I +
Sbjct: 62 GPVTVGAVDAESIHPLARLA-------AGD-GWTLALHKDGAAPAGAIEIVHVATGGASH 113
Query: 197 VPAE---GNDCY-----------WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 242
VPA D WAN + + +G+ ++ + Q +T++R
Sbjct: 114 VPARIVMAEDAQASIVETYVGDGWANRLTRIELGRSARLMRAIRLVQGSG-----FTSLR 168
Query: 243 QET--ASGYELVE--VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 298
E +G LV + G SR + + G E L Q D +
Sbjct: 169 DEAVLGAGASLVTTILGAGAGGSRLDAFITLDGVGAYAEHGGALLARDSQRHDAAVVVRH 228
Query: 299 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNL 358
P G RQL + VA V+V R AQ+TD Q R L+L+ ATVN+KP L
Sbjct: 229 AEPEGTSRQLWRA-VADDQATTSMAARVEVARDAQKTDGEQSLRGLMLKRTATVNLKPEL 287
Query: 359 QIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
+I ADDVKC+HGA + +L+ LFY +RGI + AR L +F A+ + R +R+
Sbjct: 288 EIFADDVKCAHGATVGELDAQALFYMSSRGITPDRARALLTQAFIADALSRIGDEPVRD 346
>gi|340028693|ref|ZP_08664756.1| SufBD protein [Paracoccus sp. TRP]
Length = 448
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 184/407 (45%), Gaps = 46/407 (11%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
+LP+ + R+ ++Q L + P +DE +R+TD ++ +++ + S + T+
Sbjct: 33 TLPEGGFTRAAREDAAQRLQAMGLPGPRDEYWRYTDPALFNAARPEAAEIAGDSSTLFTE 92
Query: 126 AQFPSLVLIDGF--------IQNSALNLSNLPD----------GVY-------------- 153
+ +LV +DG ++ + + NL G+Y
Sbjct: 93 IERLNLVFVDGRFDAAASDKLEGEGVEIENLASAEGRADHWAAGLYGRLEAAGQQPVKRP 152
Query: 154 --VGSLLGVSDGIMKRVSDFISE-------FQCGDLFWSINGMGAPDLGVIYVPAE-GND 203
V + L SDG++ RV+ I D S++ + + G E G
Sbjct: 153 FAVLNTLTASDGVLIRVTGRIGRPVHITYHRSAVDADVSLHHVVKLEEGAELTLLETGAI 212
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
+N VLEV +GKG + H + + I R E+ + ++ ++ G++ R+
Sbjct: 213 GARSNVVLEVEVGKGARFHHVSAKRANDPKLGIGHIFARVESEALFKSFALTVNGRMMRN 272
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHS-RLLLDHPRGYC--RQLHKCIVAHSLGQA 320
+ G D +++ L D + H + + H C RQ+ K ++ +S +
Sbjct: 273 EAVIDIAGDDAIAHIAAAVLGDGDTGRFHHDDTVFIIHGAERCESRQVFKKVLKNS-AEG 331
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF G + V AQ+TD Q+++ LLL+ + KP L+I ADDVKCSHG+ L+E+
Sbjct: 332 VFQGKILVKPGAQKTDGYQISQGLLLDEGSQFLAKPELEIYADDVKCSHGSTTGALDETA 391
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
LFY ++RG+ E A LV SF A+ +E +R+ ++ +++ +
Sbjct: 392 LFYLRSRGVPKERAIVLLVLSFLADALEEIEDERLRDDILGRLEDWL 438
>gi|398353642|ref|YP_006399106.1| FeS cluster assembly protein SufD [Sinorhizobium fredii USDA 257]
gi|390128968|gb|AFL52349.1| FeS cluster assembly protein SufD [Sinorhizobium fredii USDA 257]
Length = 425
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 162/402 (40%), Gaps = 59/402 (14%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L D+ + LP + LRD+ L + P+R+ E + +TD + + P
Sbjct: 15 ALVDAYTAQIGDLPGDGAVLSLRDTLVHELRTAGLPTRRVESWHYTDLRTLLRAV--PSA 72
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGV----YVGSLLGVSDGIMKRVSD 170
PS+ D + VL ++N +L +LP+G+ Y SLL S V
Sbjct: 73 DPSAFADRVEPIVAGATVL---SVRNGEADLKSLPEGITARSYTESLLDGSAVAGLAVLG 129
Query: 171 FISEFQCGDLFWSINGMGAPDLGVIYVPAEG----------------------------- 201
F D ING G G+ AEG
Sbjct: 130 F------DDAIGRING-GLVRGGLEIAVAEGVELEAPLEIQVAQSHGQAHTRFPVSFGAG 182
Query: 202 -------------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 248
D + +SV +V + +G V LQ Q H+ +
Sbjct: 183 SKATVLERHLSTNGDASFVSSVSDVTLAEGADVIWIILQQQGPADTHLGQIRFDLGKNAK 242
Query: 249 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 308
L ++ GGKL R +H + G + L +LL + D+ L D P ++
Sbjct: 243 LHLFVINAGGKLVRQELHGRASGEGADLTLRGINLLGGESHTDVTFTLSHDVPHTTSSEI 302
Query: 309 HKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCS 368
+ +V + V G + V + AQ+TDA +LLL A + KP L+I ADDV+C
Sbjct: 303 IRNVV-FDRAKGVLQGKILVAKDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQCG 361
Query: 369 HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
HGA + D++ +QLFY +RGI AR LV +F AE++E
Sbjct: 362 HGATVIDIDHTQLFYLLSRGIPENKARAMLVNAFVAEIVEEL 403
>gi|333892262|ref|YP_004466137.1| cysteine desulfurase activator SufB [Alteromonas sp. SN2]
gi|332992280|gb|AEF02335.1| Cysteine desulfurase activator SufB [Alteromonas sp. SN2]
Length = 418
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
V G +LSR +V + G ++++ +LL + DLHS + P G + + IV
Sbjct: 240 VGYGSELSRLDVDMHHAGEFANAKMNAIYLLAEGELFDLHSTIEHAMPNGTTEENARGIV 299
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
+AVF+G + ++R AQ+T A R+LLL R +N KP L+I ADDV+C+HGA +
Sbjct: 300 GDK-ARAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVRCAHGATV 358
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
+++E L+Y RG+ A L F F E+I P +IR+
Sbjct: 359 AEIEGEALYYMLTRGVPRSKALVMLNFGFIQELINDMPNAAIRD 402
>gi|323456627|gb|EGB12493.1| putative FeS assembly protein [Aureococcus anophagefferens]
Length = 327
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 198 PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
PA N+ +G GG + H L +Q + H+ + +S G
Sbjct: 97 PAAEKRSRLTNARTNCRVGAGGVLTH-VLDSQEADQVHVHHVQCGVRRDGEFRSRAISDG 155
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI-VAHS 316
+ R V + LGP + L DQ DL R L H G + VA
Sbjct: 156 AAVGRVAVEAEILGPHARFDFLGLQLGAGDQNLDL--RTALRHTAGDAESVQDIRNVAGE 213
Query: 317 LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDL 376
+ F G + V Q+T+A Q+ +SLLL+ ATVN P+L+I+ADDVKC+HGA I+DL
Sbjct: 214 RAKLTFKGRIAVPVTGQKTNADQICKSLLLDDGATVNAMPSLEIVADDVKCTHGATIADL 273
Query: 377 EESQLFYFQARGIDLETARKALVFSFGAEVIER 409
+E LFY +R + + ARK L+ +F ++++R
Sbjct: 274 DEEGLFYLNSRMLSEKDARKLLLKAFCYDIVQR 306
>gi|254445793|ref|ZP_05059269.1| FeS assembly protein SufD [Verrucomicrobiae bacterium DG1235]
gi|198260101|gb|EDY84409.1| FeS assembly protein SufD [Verrucomicrobiae bacterium DG1235]
Length = 443
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 5/208 (2%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
V + G G V ++ LQN + + + S + + V+ G K R H Q
Sbjct: 221 VNHIFAGVGSTVDYTLLQNFNEQTLGFQINSNIAGKDSNVKTISVNVGCKRYRSETHGQI 280
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G ++ + S L V+D Q++ R L H P Y L K + + +F G +K
Sbjct: 281 KGSGSQVNMLS--LAVADHDQEIDQRTLQTHSAPHTYSNLLFKNALVDD-ARTIFSGLIK 337
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V+ AQQTDA Q R+LLL A N P L+I A+DVKCSHGA S +E+ ++FY AR
Sbjct: 338 VDPGAQQTDAYQTNRNLLLSGTAEANSLPGLEIDANDVKCSHGATTSQIEDDEIFYMLAR 397
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSI 415
GI E A++ +V+ F E++E+ ++
Sbjct: 398 GIPREKAQELIVYGFFEEILEQISCDTV 425
>gi|422293427|gb|EKU20727.1| assembly protein [Nannochloropsis gaditana CCMP526]
Length = 572
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G+ AN+ V + + +V+H + +V + S Y+ V V+ GG+L
Sbjct: 333 GSGTALANACTTVRVDRRAEVQHLHANELGPRGLMFDAVSVTTKKLSAYKNVFVNVGGEL 392
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR-GYCRQLHKCIVAHSLGQ 319
R N G + + + +Q D+HS + H R G +++C +
Sbjct: 393 GRVNFQATLNGTEGRVDTEGVTITGEEQELDIHS--YIHHRRKGGESNMYQCNIVSGDSH 450
Query: 320 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 379
VF G +K+ A+ A QL RS++L TV+ P L++ + DV C+HGA ++D++E+
Sbjct: 451 CVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDEN 510
Query: 380 QLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+ FY Q+RGI AR+ L+ F A+V + P ++ ++
Sbjct: 511 EAFYLQSRGISRREARQVLMMGFAAQVYNQIPCEKMKKRL 550
>gi|357421235|ref|YP_004928684.1| SufBCD Fe-S assembly scaffold, FADH2-dependent [Blattabacterium sp.
(Mastotermes darwiniensis) str. MADAR]
gi|354803745|gb|AER40859.1| SufBCD Fe-S assembly scaffold, FADH2-dependent [Blattabacterium sp.
(Mastotermes darwiniensis) str. MADAR]
Length = 430
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 7/221 (3%)
Query: 210 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 269
V E+ K+ + +Q+Q L + I T ++Q+ S + S GK R+N++
Sbjct: 212 VSEIYALSNSKIEYYKIQDQEL--SMIDNTFLKQDLHSKCSVYTFSFKGKFIRNNLNFYS 269
Query: 270 LGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVK 327
G T + L LL Q D H+ L+DH + QL+K I+ S +++F+G V
Sbjct: 270 RGEKTSSSLYGISLLSGKQLVDNHT--LIDHLYSNSHSFQLYKNILWGS-SKSIFNGKVL 326
Query: 328 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 387
V + + +A Q ++LL ++ + KP L+I +D+VKCSHG I ES LFY Q+R
Sbjct: 327 VKKGTKGINAFQKNNNILLSDKSCIYAKPQLEIFSDEVKCSHGCTIGSFHESDLFYLQSR 386
Query: 388 GIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
GI + +R L+ SF EV++ ++N V + +K +G
Sbjct: 387 GISEKESRVLLLLSFLEEVLKPINIFKLKNLVHNQIKKKLG 427
>gi|296445838|ref|ZP_06887790.1| FeS assembly protein SufD [Methylosinus trichosporium OB3b]
gi|296256666|gb|EFH03741.1| FeS assembly protein SufD [Methylosinus trichosporium OB3b]
Length = 434
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 106/225 (47%), Gaps = 8/225 (3%)
Query: 208 NSVLEVVIGKGGKVRH-SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
N VL IG G +V H S + QS A + V +T + ++ + GG L R +
Sbjct: 208 NHVLAFSIGAGAEVEHISDIGPQSEAAIRLFSLMVTAQTKASFKSLGYIEGGGLVRRQIF 267
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR---QLHKCIVAHSLGQAVFD 323
+ G + L LL D + L+++H +C+ + + S G VF
Sbjct: 268 ARLAGEEASLSLDGVALLGGKDHAD--TTLVVEHAAAHCQSRERFRNVLDGQSTG--VFQ 323
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G V V AQ+TD +R+LLL AT+N KP L+I ADDV C HGA L QLFY
Sbjct: 324 GKVVVRPGAQKTDGSMQSRALLLSENATMNNKPELEIFADDVVCGHGATCGRLNADQLFY 383
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+ARG+ A L+ F E+++ + R + +++ +G
Sbjct: 384 LEARGLPKREAEALLIEGFAGEIVDAVSEEATREAYFARIRSWLG 428
>gi|359690468|ref|ZP_09260469.1| ABC transporter permease [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750130|ref|ZP_13306417.1| putative FeS assembly protein SufD [Leptospira licerasiae str.
MMD4847]
gi|418759747|ref|ZP_13315926.1| putative FeS assembly protein SufD [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384113499|gb|EID99764.1| putative FeS assembly protein SufD [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404274284|gb|EJZ41603.1| putative FeS assembly protein SufD [Leptospira licerasiae str.
MMD4847]
Length = 393
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 1/227 (0%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G D N V + G R+S L+N + H + T QE S + S GG
Sbjct: 165 GKDLVLMNGVTVLFTPANGDFRYSSLENLGDSTFHFRATYGIQEKDSKFHASLASWGGYK 224
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 320
+ G T L + + QD R+L L++ +V
Sbjct: 225 GKSFYDTNVAGKGCWTRYVGLSPLKAREFQDTEVRILHSESHAQSSILYRTVVREK-AHH 283
Query: 321 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 380
VF GN+ + + A Q+ +LLL+ A P L++ AD VKC HGA + +++E Q
Sbjct: 284 VFTGNLHIPSRCKDVGAVQINNNLLLDRTARAESIPKLEVFADSVKCEHGATVGEIDEEQ 343
Query: 381 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
LFY +RGI E ARK +V F EV+ FP ++R ++ S +++ M
Sbjct: 344 LFYLASRGISEEEARKMIVEGFLNEVVREFPSETVREELSSMIESRM 390
>gi|423341063|ref|ZP_17318778.1| FeS assembly protein SufD [Parabacteroides johnsonii CL02T12C29]
gi|409222563|gb|EKN15503.1| FeS assembly protein SufD [Parabacteroides johnsonii CL02T12C29]
Length = 450
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 7/218 (3%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ G+G + L+ S++ V+QE S + ++ L+R+N
Sbjct: 215 FLATQVVEIFAGEGAFFDYYDLEESSVSTTRFASVHVKQEAGSNVLVNGITLNNGLTRNN 274
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA-HSLGQAV 321
+++ G E L +L +Q D +S + H YC +L K ++ H++G
Sbjct: 275 YYIELNGEQAEATLCGMSILDKEQQLDTYSHIT--HAVPYCTSNELFKNVLDDHAVG--A 330
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ L
Sbjct: 331 FSGRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENAL 390
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
FY Q+RGI + AR L +F ++VI+ ++++++
Sbjct: 391 FYMQSRGIPRDEARMLLSVAFTSDVIDYVRLDALKDRL 428
>gi|388455287|ref|ZP_10137582.1| component of SufBCD complex [Fluoribacter dumoffii Tex-KL]
Length = 430
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
CY N V EV++G G K+ H +Q +S A H+ +V+Q S + +S GG L R
Sbjct: 207 CYLTNKVTEVMVGTGAKLTHCTIQRESKAAFHLGHLSVKQLAHSEFANHSLSLGGHLVRS 266
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 323
++ + + ++ + Q D H+ + Q +K ++ +AVF+
Sbjct: 267 DISLYLQEEKAHSLMNGIYAPAEGQHVDHHTTVHHMVADCSSEQDYKGVLT-GRSRAVFN 325
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G V V + AQ T+A Q ++LLL A V+ KP L+I ADDV CSHGA + L+E LFY
Sbjct: 326 GKVIVAKDAQHTNAKQQNKNLLLSANAEVDTKPQLEIFADDVLCSHGATVGQLDEEALFY 385
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPY 412
RGI A L+ +F ++ + P+
Sbjct: 386 LATRGIGRLEASHYLIHAFASDNLRLIPH 414
>gi|218264752|ref|ZP_03478464.1| hypothetical protein PRABACTJOHN_04173 [Parabacteroides johnsonii
DSM 18315]
gi|218221801|gb|EEC94451.1| hypothetical protein PRABACTJOHN_04173 [Parabacteroides johnsonii
DSM 18315]
Length = 450
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 7/218 (3%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ G+G + L+ S++ V+QE S + ++ L+R+N
Sbjct: 215 FLATQVVEIFAGEGAFFDYYDLEESSVSTTRFASVHVKQEAGSNVLVNGITLNNGLTRNN 274
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA-HSLGQAV 321
+++ G E L +L +Q D +S + H YC +L K ++ H++G
Sbjct: 275 YYIELNGEQAEATLCGMSILDKEQQLDTYSHIT--HAVPYCTSNELFKNVLDDHAVG--A 330
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ L
Sbjct: 331 FSGRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENAL 390
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
FY Q+RGI + AR L +F ++VI+ ++++++
Sbjct: 391 FYMQSRGIPRDEARMLLSVAFTSDVIDYVRLDALKDRL 428
>gi|395782048|ref|ZP_10462457.1| FeS assembly protein SufD [Bartonella rattimassiliensis 15908]
gi|395419899|gb|EJF86185.1| FeS assembly protein SufD [Bartonella rattimassiliensis 15908]
Length = 420
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 189/402 (47%), Gaps = 35/402 (8%)
Query: 49 VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS 107
++ + E + ++ ++LP ++++R+ + + +T PSRK E + +T+ +++KS
Sbjct: 7 LLAVEEDILNNFNQYVNNLPGDKAMRQIREKAIKQFQTTQLPSRKIENWHYTNLRTLLKS 66
Query: 108 ----SQIQ------PITRPSSSLDV-----STDAQFPSLVLI---DGFIQNSALNLSNLP 149
S++Q P+ S+ + S ++ L + D NS N+
Sbjct: 67 VSNFSKVQDNQLVAPLLSESTIFSINNGKTSIQSKVDHLTVKRFSDALEDNSVQINPNIS 126
Query: 150 DGVYVGSL--LGVSDGIMKRVSDF--------ISEFQCGDLFWSINGMGA-PDLGVIYVP 198
D ++G L V+DG + + + + Q G + + + V+++
Sbjct: 127 DEDFIGQLNTAFVTDGWLFHIPENTKSNIPIELQNIQMGGQSHVFSDIKVDKNSQVMFIE 186
Query: 199 AE-GND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI-KWTAVRQETASGYELVEVS 255
+ GND + +S+ + I V+ ++++ N+ ++ AV + A L ++
Sbjct: 187 HQIGNDQNTFVSSIFSLNIAAESDVKWILIRDRDFNSTQFGRFRAVLDQGAK-LSLYVIN 245
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 315
G +L+R V ++ G +++ +L +LL DL + + ++ + +V
Sbjct: 246 IGSQLNRQEVDIELQGKESDFQLRVINLLSGQTHSDLTMTVCHMEEKSTSTEIIRNVVTD 305
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
VF G ++V + AQ+TDA SL+L +A N KP L+I ADDV C HGA +++
Sbjct: 306 K-AVGVFQGIIRVAQKAQKTDARMACNSLILSDKAEFNAKPELEIFADDVACGHGATVAN 364
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRN 417
+ LFY ARGI +TAR L+ F AE+I+ +I+N
Sbjct: 365 INHDYLFYLMARGISFKTARALLIKGFIAELIDDIKQDNIQN 406
>gi|389774347|ref|ZP_10192466.1| FeS assembly protein SufD [Rhodanobacter spathiphylli B39]
gi|388437946|gb|EIL94701.1| FeS assembly protein SufD [Rhodanobacter spathiphylli B39]
Length = 439
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 179/436 (41%), Gaps = 67/436 (15%)
Query: 44 FSDPFVIQLAESLEDS-LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
+ P + L ESL D+ LP+S + L R S ST P + E +++T
Sbjct: 1 MTQPATLPLVESLLDAPLPASGIAW-----LDAARQESRDAFASTGLPDTRVEAWKYTAL 55
Query: 103 SMIKSSQIQ--PITRPSSSLDVSTDA----QFPSLVLIDGFIQNSALNLSNLPDGVYVGS 156
+ + T ++D S A + LV ++G + L LPDG+ +
Sbjct: 56 RGLAQRRFAHGDATASGRAVDPSLLALPGVEGARLVFVNGVFRADLSTLDALPDGLTLQP 115
Query: 157 LLGV------------------------------------SDGIMKRVSD---------- 170
L V +DG++ RV+
Sbjct: 116 LSRVLKDDAEPLRFGWSRSATRAEAHGAADAFARINAASAADGMVLRVAARATIAAPVQL 175
Query: 171 -FISEFQCGDLFWSIN-----GMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHS 224
FI G+L W G GA + +G A V ++ +G G K+ H
Sbjct: 176 VFIGADGEGELAWHARNLIELGEGASLTLIEQHLGDGGQAQLATFVSDIHVGAGAKLHHV 235
Query: 225 YLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 284
LQN + A I+ + +R + S L V GG L RH++ V+ LG + L + +
Sbjct: 236 TLQNAASAANLIRHSHLRLQARSEATLHVVELGGALVRHDLQVELLGDGAK--LHTRGVF 293
Query: 285 VSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRS 343
+ Q + ++L + H + VA+ + VF G + V A +DA ++
Sbjct: 294 MPHGRQHIDTQLAIRHQALNTASSSNWRGVANDRARGVFRGAIVVAPGADGSDASLSNKN 353
Query: 344 LLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFG 403
LLL A ++ KP L+I AD+V+ +HGA + L+E LFY ++RGI L AR L +F
Sbjct: 354 LLLSAGAEIDTKPELEIYADEVQAAHGATVGQLDERSLFYLRSRGIPLAEARALLTAAFC 413
Query: 404 AEVIERFPYPSIRNQV 419
+++ P P +R +
Sbjct: 414 RAMLDDLPNPDLREHL 429
>gi|218131829|ref|ZP_03460633.1| hypothetical protein BACEGG_03450 [Bacteroides eggerthii DSM 20697]
gi|217986132|gb|EEC52471.1| FeS assembly protein SufD [Bacteroides eggerthii DSM 20697]
Length = 447
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 161/389 (41%), Gaps = 63/389 (16%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKVEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++D + V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEMADRHPELVRKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PA-------------------------------EGNDC-------------YWANSVLEV 213
P EG + A V+EV
Sbjct: 161 PKNVVVEKPIQLVNILRADVNFMVNRRVLVILEEGAQARLLACDHAMDSVNFLATQVIEV 220
Query: 214 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 273
+G+ L+ + I V+QE S L ++ +R+ V G
Sbjct: 221 FVGENATFDFYELEETHTSTVRISALYVKQEANSNVLLNGMTLHNGTTRNTTEVTLAGEG 280
Query: 274 TETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 330
E L + ++D+ Q + + +DH P +L K ++ S+G F G V V
Sbjct: 281 AELNLCG--MAIADKNQHVDNNTTIDHAVPNCTSNELFKYVLDDQSVG--AFAGLVLVRP 336
Query: 331 YAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGID 390
AQ T + Q R+L A + +P L+I ADDVKCSHGA + L+ES LFY Q RGI
Sbjct: 337 DAQHTSSQQTNRNLCATCEAHMYTQPQLEIYADDVKCSHGATVGQLDESALFYMQQRGIS 396
Query: 391 LETARKALVFSFGAEVIERFPYPSIRNQV 419
+ AR L+F+F EVI+ ++++++
Sbjct: 397 MREARLLLMFAFVNEVIDTIRLDALKDRL 425
>gi|317474555|ref|ZP_07933829.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
gi|316909236|gb|EFV30916.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
Length = 447
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 161/389 (41%), Gaps = 63/389 (16%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKVEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++D + V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEMADRHPELVRKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PA-------------------------------EGNDC-------------YWANSVLEV 213
P EG + A V+EV
Sbjct: 161 PKNVVVEKPIQLVNILRADVNFMVNRRVLVILEEGAQARLLACDHAMDSVNFLATQVIEV 220
Query: 214 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 273
+G+ L+ + I V+QE S L ++ +R+ V G
Sbjct: 221 FVGENATFDFYELEETHTSTVRISALYVKQEANSNVLLNGMTLHNGTTRNTTEVTLAGEG 280
Query: 274 TETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 330
E L + ++D+ Q + + +DH P +L K ++ S+G F G V V
Sbjct: 281 AELNLCG--MAIADKNQHVDNNTTIDHAVPNCTSNELFKYVLDDQSVG--AFAGLVLVRP 336
Query: 331 YAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGID 390
AQ T + Q R+L A + +P L+I ADDVKCSHGA + L+ES LFY Q RGI
Sbjct: 337 DAQHTSSQQTNRNLCATREAHMYTQPQLEIYADDVKCSHGATVGQLDESALFYMQQRGIS 396
Query: 391 LETARKALVFSFGAEVIERFPYPSIRNQV 419
+ AR L+F+F EVI+ ++++++
Sbjct: 397 MREARLLLMFAFVNEVIDTIRLDALKDRL 425
>gi|386395547|ref|ZP_10080325.1| FeS assembly protein SufD [Bradyrhizobium sp. WSM1253]
gi|385736173|gb|EIG56369.1| FeS assembly protein SufD [Bradyrhizobium sp. WSM1253]
Length = 440
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 11/230 (4%)
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 255
+V A Y N + + +G V H L + S +A +I V + ++
Sbjct: 206 FVAAGKTSAYQVNDAVILWVGDNADVAHIRLMDDSPDAVNITSQFVTVGANTKLNFFNMT 265
Query: 256 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 313
TG +SR + G +E ++ +LL +T+ + L++DH P R++ + ++
Sbjct: 266 TGAAVSRLQGFITLAGEGSELSVNGVNLL--QKTEHGDTTLVVDHAVPNCVSREVFRAVI 323
Query: 314 ---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
AHS VF G + V AQ+TD + R+LLL A + KP L+I ADDV C HG
Sbjct: 324 DDRAHS----VFQGRIIVRPDAQKTDGKMMIRALLLSDEAEADNKPELEIFADDVSCGHG 379
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVV 420
A L++S LFY +ARG+ + A+ L+ +F E IE+ +R V+
Sbjct: 380 ATAGALDDSLLFYLKARGLPEKQAQALLIQAFVGEAIEQIADDDLREHVI 429
>gi|262382595|ref|ZP_06075732.1| FeS assembly protein SufD [Bacteroides sp. 2_1_33B]
gi|262295473|gb|EEY83404.1| FeS assembly protein SufD [Bacteroides sp. 2_1_33B]
Length = 450
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ +G + + L+ S++ VRQ ++ + ++ L+R+N
Sbjct: 215 FLATQVVEIFAEEGARFDYYDLEESSVSTTRFSSVHVRQAASTNVLVNGITLTNGLTRNN 274
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFD 323
+V+ G E+ L +L +Q D +S + P +L K ++ H++G VF
Sbjct: 275 YYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFKNVLNDHAVG--VFS 332
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ LFY
Sbjct: 333 GRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFY 392
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Q+RGI + AR L +F ++VI+ ++++++
Sbjct: 393 MQSRGIPRDEARMLLSVAFTSDVIDHVRLEALKDRL 428
>gi|444921215|ref|ZP_21241052.1| FeS cluster assembly protein sufD [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444507574|gb|ELV07749.1| FeS cluster assembly protein sufD [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 363
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 42/377 (11%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
+L L L++ R++ + +LST W ++ Q+ P D +
Sbjct: 4 TLTDNLRLERWRETPLKRVLSTEWQG-----------AVAAYPQLMPA-------DHTMP 45
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
+ L +++G + N + +P+GV + G + +D + F + S
Sbjct: 46 EKCFVLTVVNGEVNPQWFNENLVPEGVLITLEKGKIQLKVIPNTDIATPFVIYNYTVSEE 105
Query: 186 GMGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR--- 242
G DL + + + +VL V GKG + + + AA + W +
Sbjct: 106 GARTADLDISVEVGDESKL----TVLFVEAGKGQYLSSPKVAAKVGQAATLNWLKMSLNP 161
Query: 243 ------------QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 290
Q S ++ GG + R ++ V G + + + +L Q
Sbjct: 162 EMASSFYEFECDQAAESATSILHYQAGGDVVRSDITVHLKGEMSHSNFIALNL--GSGKQ 219
Query: 291 DLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEP 348
L + + L H +C Q K ++A + A+FDG + V++ AQ+TDA QLTRS+LL
Sbjct: 220 SLENVMTLHHEVPHCTSEQSIKNLLADN-ANALFDGMINVHQDAQKTDANQLTRSILLSD 278
Query: 349 RATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
+A P L+I ADDV+C+HGA + LE LFY ++RGI+L+ A+ L+ S+ AE +
Sbjct: 279 KARAMTIPRLEIYADDVRCTHGATVGFLEPESLFYLRSRGIELQEAQAMLLLSYAAEFLG 338
Query: 409 RFPYPSIRNQVVSHVKN 425
+ +++ + ++N
Sbjct: 339 MIEHETVKEWMHKQLEN 355
>gi|228470973|ref|ZP_04055818.1| FeS assembly protein SufD [Porphyromonas uenonis 60-3]
gi|228307370|gb|EEK16384.1| FeS assembly protein SufD [Porphyromonas uenonis 60-3]
Length = 462
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ N V E+ +G G +++ ++ S +RQ S L + ++R++
Sbjct: 225 FLINQVAEIYVGDGAQLKLFDMEENSHQTHRTCTYFLRQGAESQVTLATYTLNNGITRNS 284
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
+ LG E L + Q D +R+ P+ + QL K ++ F G
Sbjct: 285 FRTRFLGERAEQILGGVAVTNGTQHVDTFTRVEHIKPKCHSTQLFKNLLEEQ-STGAFSG 343
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V + AQQT+A Q R++LL P A + KP L+I ADDV+CSHG A L+E LFY
Sbjct: 344 RIFVAQSAQQTEAYQSNRNMLLSPEARMYSKPQLEIYADDVQCSHGMATGHLDEEALFYM 403
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN-LMG 428
RGI AR L +F +VI P +R+++ S V+N L+G
Sbjct: 404 MQRGIPEHEARVMLSVAFVGDVIALMPLEDLRDRIESIVRNRLLG 448
>gi|300023862|ref|YP_003756473.1| FeS assembly protein SufD [Hyphomicrobium denitrificans ATCC 51888]
gi|299525683|gb|ADJ24152.1| FeS assembly protein SufD [Hyphomicrobium denitrificans ATCC 51888]
Length = 444
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 7/223 (3%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIK-WTAVRQETASGYELVEVSTGGKLSRHNVH 266
N++ EV +GKG + H+ + H+ W V A+ Y + S+G L+R+ ++
Sbjct: 220 NALTEVSVGKGATLHHAKVAVDDGKCLHLADWDVVLGADAT-YRGFQFSSGLGLARNEIN 278
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 324
V+ G + +LS ++ + + D + L++DH C R+L K ++ G+ VF G
Sbjct: 279 VRYAGERGKLDLSGAYMARAHEHVD--TTLVVDHAVPNCESRELFKGVL-DDHGRGVFQG 335
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V AQ+TD Q+ ++L+L A + KP L+I ADDV C HG ++L+ LFY
Sbjct: 336 KIIVRPDAQKTDGKQMAQALMLSEDAEFDSKPELEIFADDVVCGHGTTSAELDPDLLFYC 395
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
++RGI AR ++ SF E I++ P + +++ N +
Sbjct: 396 RSRGIPEAEARALMIESFIGEAIDKVENPELHTALMAFAVNWL 438
>gi|423333443|ref|ZP_17311224.1| FeS assembly protein SufD [Parabacteroides distasonis CL03T12C09]
gi|409228323|gb|EKN21215.1| FeS assembly protein SufD [Parabacteroides distasonis CL03T12C09]
Length = 450
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ +G + + L+ S++ VRQ ++ + ++ L+R+N
Sbjct: 215 FLATQVVEIFAEEGARFDYYDLEESSVSTTRFSSVHVRQAASTNVLVNGITLTNGLTRNN 274
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFD 323
+V+ G E+ L +L +Q D +S + P +L K ++ H++G VF
Sbjct: 275 YYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFKNVLNDHAVG--VFS 332
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ LFY
Sbjct: 333 GRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFY 392
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Q+RGI + AR L +F ++VI+ ++++++
Sbjct: 393 MQSRGIPRDEARMLLSVAFTSDVIDHVRLEALKDRL 428
>gi|365122292|ref|ZP_09339196.1| FeS assembly protein SufD [Tannerella sp. 6_1_58FAA_CT1]
gi|363642792|gb|EHL82132.1| FeS assembly protein SufD [Tannerella sp. 6_1_58FAA_CT1]
Length = 447
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ ++ V E+ GK + ++ SLN I T V Q S + ++ +R+N
Sbjct: 212 FLSSQVTEIYAGKNAVFDYYDIEESSLNTNRITSTFVDQAEKSNVLINGITLHNGTTRNN 271
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
+ G E L + ++D+ Q + + +DH +C +L K ++ S F
Sbjct: 272 YRMTFSGEHAEAHLCG--MAIADKKQSVDNHTFIDHAVPHCTSNELFKYVLNDS-STGSF 328
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V AQ+T A Q R+L A + KP L+I ADDVKCSHGA + L+E+ LF
Sbjct: 329 SGRILVREGAQKTSAYQTNRNLCATKEAHMYTKPQLEIYADDVKCSHGATVGQLDENALF 388
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Y ++RGI AR L+F+F +VIE ++++++
Sbjct: 389 YLRSRGIPEAEARMLLMFAFTNDVIENVRMDALKDRL 425
>gi|383772889|ref|YP_005451955.1| SufD protein [Bradyrhizobium sp. S23321]
gi|381361013|dbj|BAL77843.1| SufD protein [Bradyrhizobium sp. S23321]
Length = 437
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 200 EGNDC--YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
EG D Y N+ L++ + + L + A HI Y +TG
Sbjct: 205 EGPDLSDYQVNTALQLTVADDAEFDRIKLTGEGAAALHIATLQAEIGARVRYREFGFTTG 264
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG--YCRQLHKCIVAH 315
G + R+ + V G T+ ++ LL Q D + L++DH R++ K +V
Sbjct: 265 GAVVRNQLLVTLAGKGTDAQIHQASLLAGRQHAD--TTLVIDHVAAGSQSREVFKAVVDD 322
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
+AVF G + V + AQQTDA + R+LLL A N KP L+I ADDV+C HG
Sbjct: 323 E-ARAVFQGKITVQQGAQQTDARMMARALLLSDEAIANCKPELEIFADDVQCGHGTTTGA 381
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
L++ FY ARGI + A L+ +F EVI+ +R +
Sbjct: 382 LDDQLKFYLMARGIPEKEAEALLIQAFVGEVIDAIDREDLRGAL 425
>gi|256838941|ref|ZP_05544451.1| FeS assembly protein SufD [Parabacteroides sp. D13]
gi|298374488|ref|ZP_06984446.1| FeS assembly protein SufD [Bacteroides sp. 3_1_19]
gi|256739860|gb|EEU53184.1| FeS assembly protein SufD [Parabacteroides sp. D13]
gi|298268856|gb|EFI10511.1| FeS assembly protein SufD [Bacteroides sp. 3_1_19]
Length = 450
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ +G + + L+ S++ VRQ ++ + ++ L+R+N
Sbjct: 215 FLATQVVEIFAEEGARFDYYDLEESSVSTTRFSSVHVRQAASANVLVNGITLTNGLTRNN 274
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFD 323
+V+ G E+ L +L +Q D +S + P +L K ++ H++G VF
Sbjct: 275 YYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFKNVLNDHAVG--VFS 332
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ LFY
Sbjct: 333 GRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFY 392
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Q+RGI + AR L +F ++VI+ ++++++
Sbjct: 393 MQSRGIPRDEARMLLSVAFTSDVIDHVRLEALKDRL 428
>gi|255012622|ref|ZP_05284748.1| putative ABC transporter protein [Bacteroides sp. 2_1_7]
gi|410102455|ref|ZP_11297381.1| FeS assembly protein SufD [Parabacteroides sp. D25]
gi|409238527|gb|EKN31318.1| FeS assembly protein SufD [Parabacteroides sp. D25]
Length = 450
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ +G + + L+ S++ VRQ ++ + ++ L+R+N
Sbjct: 215 FLATQVVEIFAEEGARFDYYDLEESSVSTTRFSSVHVRQAASTNVLVNGITLTNGLTRNN 274
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFD 323
+V+ G E+ L +L +Q D +S + P +L K ++ H++G VF
Sbjct: 275 YYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFKNVLNDHAVG--VFS 332
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ LFY
Sbjct: 333 GRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFY 392
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Q+RGI + AR L +F ++VI+ ++++++
Sbjct: 393 MQSRGIPRDEARMLLSVAFTSDVIDHVRLEALKDRL 428
>gi|319407270|emb|CBI80909.1| ABC-type transport system [Bartonella sp. 1-1C]
Length = 422
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 178/399 (44%), Gaps = 39/399 (9%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
S P +I + E + ++ LP +Q +R + + T PSRK E + +TD +
Sbjct: 5 SQPKLIAVEEDIINNFNQRIDLLPGDETVQVIRKKAIELFQKTRLPSRKVEYWHYTDLRV 64
Query: 105 IKSS--------QIQPITRPSSSLDVSTDAQFPSLV-----------LIDGFIQNSALNL 145
+ S Q I + V + +L L+ +NSA
Sbjct: 65 LLKSVSDFLEFNDKQTIDKLLPENIVFSIENGKALTSNKIEGVEVENLVTALDKNSAKLN 124
Query: 146 SNLPDGVYVGSL--LGVSDGIMKRVSDFIS--------EFQCGD---LFWSINGMGAPDL 192
S + D ++G L V+DG + ++SD I Q G F SI +G
Sbjct: 125 STISDENFIGQLNTAFVTDGWLLKISDNIKLDVPIELQNIQMGGQSHTFSSIK-VGKNSQ 183
Query: 193 GVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
VI GND + +SV+ + + + ++++ +A +++ R A EL
Sbjct: 184 AVIIERQIGNDKDTFVSSVISLNLAANSSITWILIRDRGESAT--QFSQFRAVLAKNAEL 241
Query: 252 V--EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 309
++ G +L+R + ++ LG ++ +L + +LL DL + + +++
Sbjct: 242 TLYVINIGSQLNRQEIDIELLGKESNFQLRAINLLSGKMHSDLTMTVRHVEEKSISKEII 301
Query: 310 KCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
+ +V + F G ++V + AQ+TDA SL+L A VKP L+I ADDV C+H
Sbjct: 302 RNVVTDK-ARGAFQGVIRVAQKAQKTDAHMACNSLILSDDAEFYVKPELEIFADDVACAH 360
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
GA ++ + LFY ARGI +TA + LV F +E+I+
Sbjct: 361 GATVAKINHDHLFYLMARGISFKTACELLVKGFISELID 399
>gi|451979728|ref|ZP_21928141.1| putative Iron-sulfur cluster assembly protein SufD [Nitrospina
gracilis 3/211]
gi|451763097|emb|CCQ89338.1| putative Iron-sulfur cluster assembly protein SufD [Nitrospina
gracilis 3/211]
Length = 438
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 184/436 (42%), Gaps = 70/436 (16%)
Query: 35 LQTTFPQATFSDPFVIQL-AESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK 93
+ TT + S+ V+ L E L+DS P+ L+ L ++ + + +P RK
Sbjct: 1 MSTTLDVISESEQAVLDLHKEFLKDSDPA----------LKPLNEAGIRRFEAVKFPHRK 50
Query: 94 DEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNL 148
E + F +T + ++ Q ++ A +PS +V ++G N S L
Sbjct: 51 HEMYTFVNTHDLTETRFQLTGHAAADAKEVQAAVYPSCQDRVIVFVNGVYDEKLSNTSGL 110
Query: 149 PDGVYVGSLL-GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD---------------L 192
V + L+ + D ++ E + D+F ++N A D L
Sbjct: 111 EAEVKITPLVQAIQDEAVQEYLLATVE-EENDVFAALNSGFAKDGLVVSVAEKAVIEKPL 169
Query: 193 GVIYVPAEGND-------------------------------CYWANSVLEVVIGKGGKV 221
V+YV + G D Y+ N+V + ++ +
Sbjct: 170 QVLYV-STGTDNGTVASHPRLLVKLQPRAEFKLAVKFIGQGAGYFVNAVQDFLVDPDAGL 228
Query: 222 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 281
+ +Q H+ T V S + S+G +L+RH+ V+ D EL+
Sbjct: 229 TYWQVQRDDPAVWHMSKTRVHLHRNSRFVCTNGSSGSRLARHHYEVRL--KDEGAELNMN 286
Query: 282 HLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQ 339
+ V + + H+ + + H +C Q + ++ ++ ++ FDG V V++ AQ T++ Q
Sbjct: 287 GISVLENEEQAHNFVRVHHEAPHCTSNQFFRNVI-NNKARSSFDGTVIVDKGAQLTNSDQ 345
Query: 340 LTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALV 399
L +L+L + KPNL I ADDVKC+HGA + ++E QLFY + RG+ + L
Sbjct: 346 LINNLMLSDDGKADAKPNLMIFADDVKCTHGATVGQIDEDQLFYLKTRGLSEAVGKSILT 405
Query: 400 FSFGAEVIERFPYPSI 415
SF +I+ P+ +
Sbjct: 406 KSFVTSIIDAVPFEDV 421
>gi|402773181|ref|YP_006592718.1| FeS assembly protein SufD [Methylocystis sp. SC2]
gi|401775201|emb|CCJ08067.1| FeS assembly protein SufD [Methylocystis sp. SC2]
Length = 440
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 171/414 (41%), Gaps = 61/414 (14%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP------- 116
S+ PQ L KLR ++ T P+R+DE +++TD + ++P+ P
Sbjct: 28 SAGAPQ---LAKLRTAAFDAFAKTGLPNRRDEAWKYTDLRALLR-DVKPLAAPPEDSAKQ 83
Query: 117 -SSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL--------------LG-- 159
+ + V +V + G+ +L +L G+ V SL +G
Sbjct: 84 GARNAAVLEGVASRRVVFVGGYFVPELSDLGDLEAGLSVVSLSEALAKGDAAAMTQIGNV 143
Query: 160 --------------VSDGIMKRVSD-----------FISEFQCGDLFWS---INGMGAPD 191
+ +G++ R+ F++ Q F I GA
Sbjct: 144 GEVDDPAFALNTAFMGEGVVIRIGAGVCVDKPIQLVFVAGAQPATYFLRSLVIVEKGARA 203
Query: 192 LGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 251
+ E Y N+ EVV+ +G + + ++ A H+ +
Sbjct: 204 TLIESFEGETVQEYHVNAATEVVLEEGASLERLKISHEGAAAMHVSTFVASLAADARLSD 263
Query: 252 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP--RGYCRQLH 309
+ GG + R+ + G L +LL + D + L LDH R + L
Sbjct: 264 FGFNLGGAVLRNQSFININGQGAHAGLRGANLLKGKEHAD--ATLFLDHAAERSESKALF 321
Query: 310 KCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH 369
K ++ S QAVF G + V AQ+TDA + R+LLL A N KP L+I ADDV+C+H
Sbjct: 322 KSVLDDS-SQAVFQGKILVRPGAQKTDARMMARTLLLSEGAQANCKPELEIFADDVQCAH 380
Query: 370 GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
G+ + L+E+ +FY ARGI A+ L +F EVI+ S+R+ + + V
Sbjct: 381 GSTVGALDENLIFYLMARGICQAEAQSLLTEAFVGEVIDAVENRSVRDALSALV 434
>gi|27379452|ref|NP_770981.1| hypothetical protein blr4341 [Bradyrhizobium japonicum USDA 110]
gi|27352603|dbj|BAC49606.1| blr4341 [Bradyrhizobium japonicum USDA 110]
Length = 434
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
A G Y + + V IG V H L + + +A +I V + +++G
Sbjct: 203 AAGAKAYQVSDAVIVTIGDNADVAHIRLMDDAPDAVNITSQFVTVGANTKVNFFNMTSGA 262
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV--- 313
+SR + G ++ ++ +LL +T+ + L++DH P R++ + ++
Sbjct: 263 AVSRLQGFITLAGEGSDLAINGVNLL--QKTEHGDTTLVVDHAVPNCVSREIFRAVIDDR 320
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
AHS VF G + V AQ+TD +TR+LLL A + KP L+I ADDV C HGA
Sbjct: 321 AHS----VFQGRIIVRPDAQKTDGKMMTRALLLSDEAEADNKPELEIFADDVSCGHGATA 376
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVV 420
L++S LFY +ARG+ + A+ L+ +F E IE+ +R V+
Sbjct: 377 GALDDSLLFYLKARGLPEKQAQALLIQAFVGEAIEQIADDGLREHVI 423
>gi|398826021|ref|ZP_10584290.1| FeS assembly protein SufD [Bradyrhizobium sp. YR681]
gi|398222137|gb|EJN08524.1| FeS assembly protein SufD [Bradyrhizobium sp. YR681]
Length = 434
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
A G Y N + + +G V H L + + +A +I V + + ++TG
Sbjct: 203 AAGAKAYQINDAVLMTVGDDADVAHIRLMDDAPDAVNITSQFVTVGANTKLNVFNMTTGA 262
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV--- 313
+SR + G +E + +LL +T+ + L++DH P R++ + ++
Sbjct: 263 AVSRLQGFITLAGEGSELSANGVNLL--QKTEHGDTTLVVDHAVPNCVSREVFRAVLDDR 320
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
AHS VF G + V AQ+TD + R+LLL A + KP L+I ADDV C HGA
Sbjct: 321 AHS----VFQGRIIVRPDAQKTDGKMMIRALLLSDEAEADNKPELEIFADDVSCGHGATA 376
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVV 420
L+ES LFY +ARG+ + A+ L+ +F E IE+ ++R V+
Sbjct: 377 GALDESLLFYLKARGLPEKQAQALLIQAFVGEAIEQIADDNLREHVI 423
>gi|223996721|ref|XP_002288034.1| hypothetical protein THAPSDRAFT_268364 [Thalassiosira pseudonana
CCMP1335]
gi|220977150|gb|EED95477.1| hypothetical protein THAPSDRAFT_268364 [Thalassiosira pseudonana
CCMP1335]
Length = 295
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG----------------- 248
+AN +V +G G V HSYL+ +S K +E ++G
Sbjct: 17 FANGFTQVFVGAGANVTHSYLE-ESGGQVTSKVEMSDEEVSAGKLDESPREVEAKRPALR 75
Query: 249 ---YELVEVSTGGKLSRHNVHVQQLG---------------PDTETELSSFHLLVSDQTQ 290
+E ++V G + V +LG P ++ F L Q
Sbjct: 76 NTHFEAIDVHVIGDEGSYISSVMELGGTGRSRIGISTTLLRPGAMASINGFALSGGAQRS 135
Query: 291 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRA 350
D+ + + RQ + +V A F G ++V + AQQTD+ QL+R++LL A
Sbjct: 136 DMRTNIHHIGQGTVSRQEQRNMVG-GRSTASFRGRIRVEQSAQQTDSEQLSRTILLSDHA 194
Query: 351 TVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERF 410
V P+L+IIADDV C+HGA +SDL E +LFY ++RG+D TAR L+++F E+
Sbjct: 195 RVWATPSLEIIADDVTCTHGATVSDLSEEELFYLRSRGLDRTTARNMLMYAFVEEIGSSV 254
Query: 411 PYP---------SIRNQVVSHVKNLM 427
+R+++V ++NL+
Sbjct: 255 DTTIAGGFDDKNGLRSRIVRRLENLI 280
>gi|390565474|ref|ZP_10246130.1| FeS assembly protein SufD [Nitrolancetus hollandicus Lb]
gi|390171290|emb|CCF85465.1| FeS assembly protein SufD [Nitrolancetus hollandicus Lb]
Length = 449
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 5/230 (2%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG--YELVEVSTGG 258
G D A+ V+E+ + +VR Y+Q Q + +T R + ++ VS G
Sbjct: 222 GTDPLLASGVVEIFAKEASQVR--YIQVQDWGRSAWNFTTQRAVISQDAVVNMLNVSLGS 279
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 318
+LSR+ + +G + E+ + Q D +R + P L+K +
Sbjct: 280 RLSRNLIASDLIGAGSAAEMLGLYFADERQHLDNQTRQMHIAPYATSDLLYKGAI-KDRA 338
Query: 319 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 378
+ V+ G +KV AQ+TDA Q R+LLL + + P L+I A+DV+C+HGA + +EE
Sbjct: 339 RTVYLGVIKVFPDAQRTDAYQANRNLLLSRTSRADTMPELEIGANDVRCTHGATVGQVEE 398
Query: 379 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+FY +RGI+ A K +V F EVIER P P ++ V + + +G
Sbjct: 399 EYIFYLMSRGINRTEAVKLIVDGFFDEVIERVPVPEVQETVRAAIARKIG 448
>gi|334345659|ref|YP_004554211.1| SufBD protein [Sphingobium chlorophenolicum L-1]
gi|334102281|gb|AEG49705.1| SufBD protein [Sphingobium chlorophenolicum L-1]
Length = 250
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 4/203 (1%)
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
+ G VRH LQ+ + AA + A+ + + ++ GGKL R V LG +
Sbjct: 36 VAAGESVRHHLLQDAADGAAAVHDYAITIADGARCDFHVLNIGGKLGRVTFAVT-LGEGS 94
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNRYAQ 333
EL+ + SDQ ++ + + P Q + I+ H+ G + G++ V R AQ
Sbjct: 95 HFELNGAIIGGSDQVLEIITSVTHAQPDATSGQTIRSILGQHATGS--YLGSINVARDAQ 152
Query: 334 QTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLET 393
+TDA Q +++LL+ AT N KP L+I ADDVKC+HGA + +L++ LFY +RG+D T
Sbjct: 153 RTDAFQSVKAMLLDRTATANAKPELEIYADDVKCAHGATVGELDKQALFYMASRGMDPAT 212
Query: 394 ARKALVFSFGAEVIERFPYPSIR 416
A+ L+ +F A V + +++
Sbjct: 213 AKTLLLKAFVAGVFDDVADEAVK 235
>gi|75675854|ref|YP_318275.1| FeS assembly protein SufD [Nitrobacter winogradskyi Nb-255]
gi|74420724|gb|ABA04923.1| Iron-regulated ABC transporter permease protein SufD [Nitrobacter
winogradskyi Nb-255]
Length = 440
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 11/211 (5%)
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
+G ++H L + +AA+I V + + + +++G +SR+ ++ G +
Sbjct: 225 VGDDAVLQHVRLVEDARDAANISTAIVTIGAKATFNSLNLTSGAAVSRYQGFIKFSGEGS 284
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVN 329
+++ +LL Q D + L+LDH +C ++ + ++ AHS VF G + V
Sbjct: 285 HADVNGVNLLNGRQHGD--TTLVLDHAVPHCSSNEVFRAVLDDQAHS----VFQGKIIVR 338
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
AQ+TD +TR+LLL A + KP L+I ADDV C HGA I L+ES LFY +ARG+
Sbjct: 339 PDAQKTDGRMMTRALLLSDSAEADNKPELEIFADDVSCGHGATIGALDESLLFYLRARGL 398
Query: 390 DLETARKALVFSFGAEVIERFPYPSIRNQVV 420
+ A+ L+ +F E IE +R+ V+
Sbjct: 399 SEKEAQALLIQAFVGEAIESVADDGLRDVVI 429
>gi|365881110|ref|ZP_09420440.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 375]
gi|365290774|emb|CCD92971.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 375]
Length = 440
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 177/435 (40%), Gaps = 72/435 (16%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + ++R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGTGKVAEIRREAFAAFERTGLPHRRIEEWKYTDLRALARELL 68
Query: 111 QPITRPSSSLDVSTDAQF--------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
P ++ A LVL+DG + +L+ LP GV V +L V D
Sbjct: 69 PLAGAPDAAALAKAKAAIASAAIDGATKLVLVDGVVAAELSDLAALPAGVTVRTLRAVLD 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAEGNDCYWANSVLEVV-------- 214
+ + D S+N A D GV+ A+G ++ V
Sbjct: 129 EASNDSRGDLLLTKASDPMLSLNAALATD-GVVVTVADGTQLSSPLHLIHVATASKAARY 187
Query: 215 ------IGKGGK-------------------------------VRHSYLQNQSLNAAHIK 237
IG+G + + H L + +A ++
Sbjct: 188 SRSHVRIGQGARATLVETSIVADGAAAYQANDAAVIWVGDQAQLSHIRLMRDAADALNVS 247
Query: 238 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 297
S L +++GG +SR G +E ++ +LL Q D+ L+
Sbjct: 248 SELFTVGAKSKLSLFNMTSGGAVSRLQAFFTLAGEASELIVNGVNLLRDKQHGDMT--LV 305
Query: 298 LDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 352
+DH C R+ + ++ AHS VF G + V AQQTD +TR+LLL A
Sbjct: 306 VDHAVPGCTSRENFRAVLDDRAHS----VFQGRIIVRPDAQQTDGKMMTRALLLSDEAEA 361
Query: 353 NVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPY 412
+ KP L+I ADDV C HGA L++S LFY +ARG+ + A+ L+ +F E IE
Sbjct: 362 DSKPELEIFADDVSCGHGATAGALDDSLLFYLRARGLPEKQAQALLIQAFVGEAIEAIED 421
Query: 413 PSIRNQVVSHVKNLM 427
+R +V++ ++ +
Sbjct: 422 DGLRERVIATAQDWL 436
>gi|406935981|gb|EKD69808.1| hypothetical protein ACD_46C00724G0006 [uncultured bacterium]
Length = 433
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y+ N V + + K+ + Q + + A H+ T + Q+ S + GG SR +
Sbjct: 205 YFINVTDHVYVEENAKLEVNKFQQEHVEAIHMAHTFLSQKNNSRVVYNHFARGGLFSRDD 264
Query: 265 VHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 323
V V P E F+ L D Q D H + P + L+K I+ +AVF+
Sbjct: 265 VIVNLEEPGAECLTGGFYRLCRDHQYADNHVDINHLAPHSHSEMLYKGILDKK-SRAVFN 323
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V + AQ+ A Q ++LL A V KP L+I ADDVKC HGA ++E LFY
Sbjct: 324 GKLLVEKDAQKILAYQANHNILLSKNAEVFSKPALEIYADDVKCKHGATTGQMDEDALFY 383
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK-NLMGTTD 431
++RGI A L+ F EVI+R +I++Q V+ + GTT+
Sbjct: 384 MRSRGIHRAEAANILLQGFAGEVIQRVTDSTIKSQATEMVQCHECGTTN 432
>gi|224025202|ref|ZP_03643568.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
gi|224018438|gb|EEF76436.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
Length = 450
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 160/388 (41%), Gaps = 61/388 (15%)
Query: 89 WPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN 144
+P+RK E +++TD + + + P + +V P++ F+ N A +
Sbjct: 45 FPTRKQEDYKYTDVGRYFAPDYGLNLNRLEIPVNPYEVFK-CDVPNMSTSLYFVVNDAFD 103
Query: 145 -----LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
++LP+GV GSL ++ + + + + D + N + A D V+YV
Sbjct: 104 RHDSPTASLPEGVEFGSLCEIATRRPELIKKYYAHLADTSEDALAAFNTLFAQDGVVMYV 163
Query: 198 PA-------------------------------EGNDC-------------YWANSVLEV 213
P EG + + V EV
Sbjct: 164 PKGVVVERPIQLVNILRADVATLVNRRLLIILEEGAQAKLLICDHAMDEVNFLSTQVAEV 223
Query: 214 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 273
+G+ + L+ + V Q S L V+ +R+ VHV GP
Sbjct: 224 FVGENASLDLYELEETHYSTVRFSNLYVHQSAGSRVLLNGVTLHNGTTRNRVHVVLDGPG 283
Query: 274 TETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRY 331
E +L + D+ D H+ +DH C +L K ++ F G V V
Sbjct: 284 AEVDLCGMAIADRDEQVDNHT--FIDHRAPACTSNELFKYVLDER-AVGAFAGKVLVRPG 340
Query: 332 AQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDL 391
A++T + Q R+L + A + +P L+I ADDVKCSHGA + L+E+ LFY Q RG+ L
Sbjct: 341 AERTSSLQTNRNLCVTREARMYTQPQLEIYADDVKCSHGATVGQLDENALFYMQQRGVSL 400
Query: 392 ETARKALVFSFGAEVIERFPYPSIRNQV 419
AR L+F+F EV +R ++R+++
Sbjct: 401 REARLLLMFAFVNEVTDRIRMEALRDRL 428
>gi|410615606|ref|ZP_11326625.1| Fe-S cluster assembly protein SufD [Glaciecola psychrophila 170]
gi|410165019|dbj|GAC40514.1| Fe-S cluster assembly protein SufD [Glaciecola psychrophila 170]
Length = 440
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)
Query: 208 NSVLEVVIGKGGKVRHSYLQ-NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 266
N+V+E + + HS LQ ++S+ + I V+Q S Y+ ++S KL R+++
Sbjct: 214 NTVIECFVNDKAHITHSRLQLDESVTS--ICSHRVKQGHHSTYQQHQISLASKLKRNDLT 271
Query: 267 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 326
V G ++ QT D H + P ++ + +V AVF+G +
Sbjct: 272 VSLQGEYASNDIRGSFYGRHQQTIDNHICMQHIAPNCSSNEVFRGLVDDQ-ANAVFNGRI 330
Query: 327 KVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQA 386
++ AQ+T A ++LLL AT+N KP L+I ADDV+CSHGA + + LFY Q+
Sbjct: 331 HIHPNAQKTLAELSNKNLLLSSTATINTKPELEIYADDVRCSHGATVGQINSEALFYLQS 390
Query: 387 RGIDLETARKALVFSFGAEVIERFPYPSIR 416
RGI A++ L +F AE++E+ P S+R
Sbjct: 391 RGIPRVEAKRLLSLAFIAEIVEQLPQNSVR 420
>gi|94676925|ref|YP_588901.1| cysteine desulfurase activator complex subunit SufD [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94220075|gb|ABF14234.1| FeS assembly protein SufD [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 432
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 227 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 286
+N S + AH T Y + S G +++H +Q G ++ + S LL
Sbjct: 229 KNNSYHFAHNDITIGLNAVVRDYSFI-FSPG--MTQHQTSMQLNGEGSDVLVKSLLLLTH 285
Query: 287 DQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSL 344
D+ + L+H +GYC QLHK ++A GQ +F+G +KVN+ A +T+ + +L
Sbjct: 286 QDISDICT--YLEHNKGYCCSHQLHK-LIALDQGQGMFNGLIKVNQEALKTNGKMINNNL 342
Query: 345 LLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGA 404
LL A ++ KP L+I DDVKCSHG +S + +Q+FY ++RGI+ A+ ++ +F A
Sbjct: 343 LLGKLANIHSKPQLEIYTDDVKCSHGTTVSSFDHNQMFYLRSRGINKNDAQHTMISAFAA 402
Query: 405 EVIE 408
++I+
Sbjct: 403 DIID 406
>gi|333381976|ref|ZP_08473654.1| hypothetical protein HMPREF9455_01820 [Dysgonomonas gadei ATCC
BAA-286]
gi|332829537|gb|EGK02186.1| hypothetical protein HMPREF9455_01820 [Dysgonomonas gadei ATCC
BAA-286]
Length = 446
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V E+ G+ V L+ S + T V QE +S + ++ +SR+N
Sbjct: 211 FLATQVTEIYAGRNAVVDCYDLEENSDKVTRLTNTFVLQEGSSNVLVNNMTLNTGVSRNN 270
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVF 322
+V+ G E + ++++D+ Q + + LDH + +C QL K V + F
Sbjct: 271 YNVKLNGEHAEAYVCG--MVIADRQQYVDNFAFLDHAKPHCTSTQLFK-YVLQDEAKGSF 327
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V + AQ+T A Q +L + P A + KP L+I ADDVKCSHG L+E LF
Sbjct: 328 CGRILVEKDAQKTMAYQSNNNLCISPNAKMYAKPQLEIYADDVKCSHGLTTGQLDEEALF 387
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Y ++RGI + A+ L+ +F A V+E P +R ++
Sbjct: 388 YLRSRGIGYDAAKLMLMQAFTAGVLEHVRIPRLRERL 424
>gi|269837553|ref|YP_003319781.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
gi|269786816|gb|ACZ38959.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
Length = 443
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 9/226 (3%)
Query: 207 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV----EVSTGGKLSR 262
A V+E++ + +VR+ LQ+ N W V Q + + V V G KLS+
Sbjct: 222 AAGVVEIIAREEAQVRYIQLQDWGRNV----WNFVTQRSLIAQDAVVNSLNVGLGSKLSK 277
Query: 263 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 322
+ +G E+ + Q D +R P L K + + V+
Sbjct: 278 SFIAGHLVGAGALAEMLGLYFADETQHLDFQTRQWHISPYAQSDLLFKGAI-KDRARTVY 336
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G +KV AQ+TDA Q R+L+L A + PNL+I A+DV+C+HGA + +EE +F
Sbjct: 337 SGIIKVFEGAQRTDAYQANRNLILSRTARADTIPNLEIGANDVRCTHGATVGQVEEEYIF 396
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
Y +RGI A K +V F EVIER P P ++ V + + +G
Sbjct: 397 YLMSRGIGRTEAVKLIVDGFFDEVIERVPVPEVQETVRAAIARKIG 442
>gi|333908821|ref|YP_004482407.1| FeS assembly protein SufD [Marinomonas posidonica IVIA-Po-181]
gi|333478827|gb|AEF55488.1| FeS assembly protein SufD [Marinomonas posidonica IVIA-Po-181]
Length = 419
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 313
V G +LSR + + G + +L++ +LL + DLH+ + P G + + IV
Sbjct: 241 VGFGSELSRLDTDIIHAGEFADAKLNAMYLLDGKELFDLHATVEHAMPNGTTEENVRGIV 300
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
A +AVF+G + ++R AQ+T A R+LL+ +A +N KP L+I ADDV+C+HGA I
Sbjct: 301 ADR-ARAVFNGRIHIHRDAQKTLAELNNRNLLMSNKAEINTKPELEIYADDVRCAHGATI 359
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
+++++ L+Y + RGI A+ L F F E+I+ P ++ V
Sbjct: 360 AEIDKQALYYLETRGISKSKAQVMLNFGFINELIDLMPNEALAEWV 405
>gi|226355169|ref|YP_002784909.1| FeS assembly protein SufD [Deinococcus deserti VCD115]
gi|226317159|gb|ACO45155.1| putative FeS assembly protein SufD [Deinococcus deserti VCD115]
Length = 450
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 118/226 (52%), Gaps = 7/226 (3%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL--VEVSTGGKLSRH 263
+A +E+V+ +G ++R+ +QN HI+ R + A L + V+ GG LSR
Sbjct: 227 YAIGAVELVVKQGARLRYVSIQNWGKGVTHIQRQ--RGDVARDATLNSLVVTMGGTLSRT 284
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV-AHSLGQAVF 322
+ G +++E+ + + DQ D ++ P + L+K + S+G VF
Sbjct: 285 EMQSYLRGQGSDSEMLALYFANEDQHFDHYTLQHHAAPNAHSDLLYKGVGDGQSVG--VF 342
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G +KV+ AQ+TDA Q R+L+L A P L+I A+DV+CSHG+ ++E QLF
Sbjct: 343 SGMIKVDLGAQKTDAYQKHRTLMLSSEARNFSVPQLEINANDVRCSHGSTTGPVDEEQLF 402
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+ ++RGI E A K LV +F +V+ R P S+ + + +G
Sbjct: 403 FLRSRGIRKELAEKMLVTAFLEDVLARVPLQSVVKYIEGIIAEKVG 448
>gi|449016310|dbj|BAM79712.1| unknown protein involving with Iron-Sulfur proteins SufD
[Cyanidioschyzon merolae strain 10D]
Length = 601
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 120/244 (49%), Gaps = 16/244 (6%)
Query: 198 PAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA---------HIKWTAVRQETASG 248
P + ND + N + V + ++ S + +QS++ + H+ +VR E +
Sbjct: 349 PQQPNDATFLNECVNVHLETDACLKLSIIGSQSVSESVRQDQHRFYHMTGLSVRCEQGTS 408
Query: 249 YELVEVSTGG-KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR- 306
+ ++ L R + V +G ++ LL D+ R+ H C
Sbjct: 409 FTATNLNVDSLALRRLVMGVDLVGRRASCNVNGLTLLQDRALGDVQVRV--SHHVAQCES 466
Query: 307 -QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDV 365
QLHK +V AV+ G V V R A T+A QL RSLLL + V+V P L+++ DDV
Sbjct: 467 NQLHKNVVVDR-STAVYRGTVYVEREADGTNAHQLIRSLLLSDGSRVHVMPFLEVLNDDV 525
Query: 366 KCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSH-VK 424
C+HGAA + L+E +LFY Q+RG + AR L++ F ++ + PYP + + H V+
Sbjct: 526 SCTHGAASAHLDEVELFYLQSRGASRDEARTLLLYGFVGDIAKLVPYPRMEGWIRDHLVR 585
Query: 425 NLMG 428
N+ G
Sbjct: 586 NIAG 589
>gi|294677415|ref|YP_003578030.1| FeS assembly protein SufD [Rhodobacter capsulatus SB 1003]
gi|294476235|gb|ADE85623.1| FeS assembly protein SufD [Rhodobacter capsulatus SB 1003]
Length = 422
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 4/223 (1%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N V+EV +G G + H Q I R + ++ V+ G L+R+ +
Sbjct: 196 NKVMEVDVGAGARFHHIRAQGPDSERRAITHIFARVAEKALFKSFTVTVNGALTRNEAVI 255
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHS-RLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 324
+ +G D ++ L LH + + H C RQ+ K ++ H F G
Sbjct: 256 EIIGNDAVAHVAGAALGDGATGAFLHDDTVFVTHAGLRCESRQVFKKVLKHG-AIGTFQG 314
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V AQ+TD Q+++SLLL+ + KP L+I ADDVKCSHG+ ++E+ LFY
Sbjct: 315 KILVKPGAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDVKCSHGSTTGAIDETALFYL 374
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
++RG+ E A+ LV SF A+ I+ ++ ++V+ ++ +
Sbjct: 375 RSRGVPEEEAKGLLVLSFLADAIDEIEDAGLKEEIVARLETWL 417
>gi|288928614|ref|ZP_06422460.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329598|gb|EFC68183.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
Length = 447
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 180/405 (44%), Gaps = 71/405 (17%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSS-----SLDVSTDAQ 127
R+++ + +P+RK E +++TD S + +Q + P + S DV +
Sbjct: 30 REAAFEDFKRLGFPTRKTEEYKYTDISKLFEPDFGLNLQRLPMPINPYEVFSCDVPHLST 89
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF------QCGDLF 181
V+ D F+Q +A + LPDGV + SL ++ + DFI+ + GD
Sbjct: 90 ANHFVVNDAFLQPTAPH-KQLPDGVVITSLCQYAE----KNPDFIARYYGKLAATSGDAV 144
Query: 182 WSINGMGAPDLGVIYVP----------------------------------AEG------ 201
++N M A D ++YVP AE
Sbjct: 145 TALNTMLAQDGLLVYVPRGVKLGQTIQVINILHAQVDLMVNRRVLIIVEPQAEAKFLFCD 204
Query: 202 ----NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 257
+ + A V+E +G ++ ++ + + Q+++S ++
Sbjct: 205 HTFDDQRFLATQVIEAFVGDNARLDLYCMEETHEKNVRVSSVYIEQQSSSRVNHNVITLH 264
Query: 258 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVA- 314
++R+NV + G E LS +++D+ Q + + ++DH C+ +L+K ++
Sbjct: 265 NGVTRNNVSLTFRGEGAECNLSG--CVIADKKQHVDNNTVIDHAVPNCQSHELYKYVLDD 322
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
++G F G V V + AQ TD+ +++ +A + +P L+I ADDVKCSHG+ +
Sbjct: 323 EAIG--AFAGLVLVRQDAQHTDSEMRNQNICATKKAHMYTQPMLEIYADDVKCSHGSTVG 380
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
L ++ LFY + RGI + A+ L F+F EVI++ +R ++
Sbjct: 381 QLNDAALFYMRQRGISEKEAKLLLEFAFINEVIDQMDLEPLRERL 425
>gi|123967620|ref|YP_001008478.1| ABC transporter, membrane component [Prochlorococcus marinus str.
AS9601]
gi|123197730|gb|ABM69371.1| ABC transporter, membrane component [Prochlorococcus marinus str.
AS9601]
Length = 405
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 8/195 (4%)
Query: 224 SYLQNQS--LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 281
SY +N+S LN+ + V Q S Y L + +R + + Q + +T +
Sbjct: 206 SYGENKSNLLNSLN-----VIQRKNSEYNLGSLHFKFNYARFEIRITQSEGNAKTNIKGM 260
Query: 282 HLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLT 341
+ D+ ++++ + P G+ Q++K + A A+F+G++ V + AQ+TDA QL+
Sbjct: 261 QITKKDEQISTYTKIDFNGPNGFLDQINKSL-ADDESHAIFEGSIIVPKIAQKTDASQLS 319
Query: 342 RSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFS 401
R+LLL A ++ KP L+IIADDVKC HGA IS L E +LFY ++RGI L A K + S
Sbjct: 320 RNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEDELFYMRSRGITLPEASKLQLSS 379
Query: 402 FGAEVIERFPYPSIR 416
+ E+I P R
Sbjct: 380 YFQEIISFIPVSKDR 394
>gi|357416831|ref|YP_004929851.1| iron ABC transporter permease [Pseudoxanthomonas spadix BD-a59]
gi|355334409|gb|AER55810.1| iron ABC transporter permease [Pseudoxanthomonas spadix BD-a59]
Length = 420
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 172/378 (45%), Gaps = 56/378 (14%)
Query: 78 DSSSQTLL----STPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--L 131
DS+ +T+L + P++++E +++T ++ P+ + + +D + A P+ L
Sbjct: 15 DSARRTVLDEALAAGLPTQREEAWKYTSLRALERRSFAPV-QVAPPVDAAPIAHIPAPRL 73
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSL------------------------------LGVS 161
VL++G S +LS L DG+ V L +
Sbjct: 74 VLVNGRHVESLSDLSGLADGISVQRLSQALAEGGDAARFLARRFERGDEVFARLNAALAT 133
Query: 162 DGIMKRVSD-----------FISEFQCGDLFWSINGM-----GAPDLGVIYVPAEGNDCY 205
+G++ R FI D W + + GA V + A G +
Sbjct: 134 EGVLVRAEAGVQAATPLQLVFIGAADSTDRAWHLRHLIELRAGAQLRVVEHHLAAGEHAH 193
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
AN++ V + +G ++ H+ LQ++S A + T + Y +++ G LSRH +
Sbjct: 194 LANTLTHVHLAQGAQLVHARLQHESDKATSLLRTDAVLARETVYRRLDLELGAALSRHEL 253
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLGQAVFDG 324
+V+ G E + +L++ + L +RL +DH R L + G+AVF G
Sbjct: 254 NVRLEGEHARLEANG--VLLAGGRRHLDTRLGIDHIARDTGCALTWRGLGTGRGRAVFHG 311
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ + + A TDA ++LLL A ++ +P L+I AD+V+ +HGA + L+ + LFY
Sbjct: 312 GILIRQGADGTDARLSNKNLLLSDDAEIDTQPVLEIHADEVQAAHGATVGRLDANALFYL 371
Query: 385 QARGIDLETARKALVFSF 402
++RG+ LE A++ L +F
Sbjct: 372 RSRGLPLEQAQRLLTAAF 389
>gi|114704648|ref|ZP_01437556.1| hypothetical protein FP2506_06926 [Fulvimarina pelagi HTCC2506]
gi|114539433|gb|EAU42553.1| hypothetical protein FP2506_06926 [Fulvimarina pelagi HTCC2506]
Length = 417
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
+G G V Q + L+++H+ +VR E S + L ++ GG R+ VH +G
Sbjct: 202 VGAGANVLWIVDQEKGLDSSHLGQLSVRLEADSVFRLFVLNAGGGFVRYEVHTDVVGEGA 261
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQ 334
+ ++ +LL + Q D+ + L+H + + G VF G +KV R AQ+
Sbjct: 262 DVQIRGVNLLHAGQHVDVTT--TLNHTVAHTTATETFRNVVTGGHGVFQGIIKVARGAQK 319
Query: 335 TDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETA 394
TDA SLLL + KP L+I ADDV+C HGA +++ LFY +RGI + A
Sbjct: 320 TDAKMACNSLLLSDEGDFSAKPELEIFADDVQCGHGATAGEIDADHLFYLMSRGIPGDQA 379
Query: 395 RKALVFSF 402
R L+ +F
Sbjct: 380 RALLIKAF 387
>gi|328543979|ref|YP_004304088.1| FeS assembly protein SufD [Polymorphum gilvum SL003B-26A1]
gi|326413723|gb|ADZ70786.1| FeS assembly protein SufD [Polymorphum gilvum SL003B-26A1]
Length = 440
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 5/222 (2%)
Query: 208 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 267
N+V + +GKG + L + + + AH+ + R + + + G +R+ V
Sbjct: 218 NAVSDYDLGKGAILASVRLMSGAGSHAHVSTSFARLAGDAHLKTLGFVVGTAFARNQSFV 277
Query: 268 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 325
G +L ++ DQ D L++DH +C R+ K ++ +AV+ G
Sbjct: 278 SFAGEGARADLFGVTMVRGDQLAD--QTLVVDHAVPHCDSREYFKSVI-DGRAKAVYQGK 334
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+ V +AQ+TD +T++LLL A + KP L+I ADDV+C+HGA ++E LFY +
Sbjct: 335 IIVRPHAQKTDGRMMTQALLLSEEAEMANKPELEIFADDVQCAHGATSGQIDEDLLFYLR 394
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 427
ARGI AR LV +F +E IE F S+ + V++ +
Sbjct: 395 ARGIPEAEARTLLVLAFLSEAIEEFGSESVTEPLEQRVRDWL 436
>gi|390166730|ref|ZP_10218986.1| Fe-S cluster assembly protein SufD [Sphingobium indicum B90A]
gi|389590397|gb|EIM68389.1| Fe-S cluster assembly protein SufD [Sphingobium indicum B90A]
Length = 250
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
+ G RH LQ+ + AA + A+ + + ++ GGKL R V LG +
Sbjct: 36 VAAGENARHHLLQDAADGAAAVHDYAITVADGARCDFHILNIGGKLGRVTFAVT-LGKGS 94
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNRYAQ 333
EL+ + DQ ++ + + P Q + I+ H+ G + G++ V R AQ
Sbjct: 95 HFELNGAIIGGGDQVLEIVTAVTHAQPDATSGQTIRSILGQHATGS--YLGSINVARAAQ 152
Query: 334 QTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLET 393
+TDA Q +++LL+ AT N KP L+I ADDVKC+HGA + +L++ LFY +RG+D T
Sbjct: 153 RTDAFQSVKAMLLDRTATANAKPELEIYADDVKCAHGATVGELDQQALFYMASRGMDPAT 212
Query: 394 ARKALVFSFGAEVIERFPYPSIRNQV 419
A+ L+ +F A V + ++++ +
Sbjct: 213 AKTLLLKAFVAGVFDDMADEAVKDSL 238
>gi|313887268|ref|ZP_07820959.1| FeS assembly protein SufD [Porphyromonas asaccharolytica
PR426713P-I]
gi|332299231|ref|YP_004441152.1| FeS assembly protein SufD [Porphyromonas asaccharolytica DSM 20707]
gi|312923187|gb|EFR34005.1| FeS assembly protein SufD [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176294|gb|AEE11984.1| FeS assembly protein SufD [Porphyromonas asaccharolytica DSM 20707]
Length = 462
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ N V E+ +G G +++ ++ S +RQ S L + ++R++
Sbjct: 225 FLVNQVAEIYVGDGAQLKLFDMEENSHQTHRTCAYFLRQGAESQVTLAAYTLNNGITRNS 284
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 324
+ LG E L + Q D +R+ P+ + QL K ++ F G
Sbjct: 285 FRTRFLGEHAEQTLGGVAVTNGTQHVDTFTRVEHIKPKCHSTQLFKNLLEEQ-STGAFSG 343
Query: 325 NVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYF 384
+ V + AQQT+A Q R++LL A + KP L+I ADDV+CSHG A L+E LFY
Sbjct: 344 RIFVAQSAQQTEAYQSNRNMLLSSEARMYSKPQLEIYADDVQCSHGMATGHLDEEALFYM 403
Query: 385 QARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKN-LMG 428
RGI AR L +F +VI P +R+++ S V+N L+G
Sbjct: 404 MQRGIPEHEARVMLSVAFVGDVIALMPLEDLRDRIESIVRNRLLG 448
>gi|254428157|ref|ZP_05041864.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
gi|196194326|gb|EDX89285.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
Length = 409
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 161/394 (40%), Gaps = 52/394 (13%)
Query: 63 SSSSLPQPLPLQKLRDSSSQ--------TLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
S+SSL Q L Q L ++ L + +P RK E +++T + + I
Sbjct: 4 SASSLAQELKTQALANAQRSGSEGDALAALEAANFPERKTERWKYTSLQALADGHLNAIA 63
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
D P+L I N L NLPDGV + +G+ + + S
Sbjct: 64 ------DGEISQPLPALSEHVVTINNGQLVSHNLPDGVTLSHDGPAINGLQTPFAFYNSA 117
Query: 175 F-------------------------------QCGDLFWSINGMGAPDLGVIYVPAEGND 203
C + GA + + +G
Sbjct: 118 VASQPVVLTVAANTRIEQPIHVQIQSASDAPAHCNPRLVVVLNQGAEAAVIEHYHGQGE- 176
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
N+V +V ++ H LQ + ++ HI + Q+ S + ++ TG +L R+
Sbjct: 177 -ALTNAVTALVTADNAQLTHYRLQGEQASSLHIGTLIIDQQGISKVDSYQLMTGNRLRRN 235
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAV 321
+V + L + EL+ + V + ++L ++H C Q K + + G+AV
Sbjct: 236 DV--RALVSKSGAELNMKGIFVVRDKTHVDNQLCVEHSVPNCESDQNFKGLAGEN-GKAV 292
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F+G + ++ A T+A ++LLL P A +N KP L+I DDVKC+HG + L+ Q
Sbjct: 293 FNGRIHIHPGASGTNAELSNKNLLLNPGAEINTKPELEIYNDDVKCAHGTTVGQLDAMQQ 352
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
FY Q+RGI A++ L F E++ P+ +
Sbjct: 353 FYLQSRGIPAAEAKRMLSLGFVNELLMTLPHEKV 386
>gi|374575248|ref|ZP_09648344.1| FeS assembly protein SufD [Bradyrhizobium sp. WSM471]
gi|374423569|gb|EHR03102.1| FeS assembly protein SufD [Bradyrhizobium sp. WSM471]
Length = 434
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 199 AEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 258
A G Y + + + +G V H L + S +A +I V + ++TG
Sbjct: 203 AAGAKAYQVSDAVILSVGDNADVAHIRLMDDSPDAVNITSQFVTVGANTKLNFFNMTTGA 262
Query: 259 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV--- 313
+SR + G +E ++ +LL +T+ + L++DH P R++ + ++
Sbjct: 263 AVSRLQGFITLAGEGSELSVNGVNLL--QKTEHGDTTLVVDHAVPNCVSREVFRAVIDDR 320
Query: 314 AHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAI 373
AHS VF G + V AQ+TD + R+LLL A + KP L+I ADDV C HGA
Sbjct: 321 AHS----VFQGRIIVRPDAQKTDGKMMIRALLLSDEAEADNKPELEIFADDVSCGHGATA 376
Query: 374 SDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVV 420
L++S LFY +ARG+ + A+ L+ +F E IE+ +R V+
Sbjct: 377 GALDDSLLFYLKARGLPEKQAQALLIQAFVGEAIEQIADDDLREHVI 423
>gi|383762991|ref|YP_005441973.1| protein SufD [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381383259|dbj|BAM00076.1| protein SufD [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 424
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 209 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 268
SV+E+++G G VR+ LQ+ +A + + ++VS G +L++ + V
Sbjct: 205 SVVELILGPGSVVRYMNLQDFEHSAWNFLTGRAVMNRDADLRWIQVSWGSRLTKAFLDVD 264
Query: 269 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 328
+GP EL + +Q D + L P + L + ++V+ G +KV
Sbjct: 265 LMGPGGHAELLGIYFPTGEQHIDHQTLQLHRAPHCFSDLLFNGALKDK-SRSVYMGVIKV 323
Query: 329 NRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARG 388
AQ+TDA Q +L+L+P A + P L+I ADDV+C+HGA ++ +EE +FY ARG
Sbjct: 324 FPGAQKTDAYQRNGNLILDPTARADSIPGLEIQADDVRCTHGATVAQVEEEYVFYLMARG 383
Query: 389 IDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMG 428
+ A + +V F V++R P S+ +++ S ++ +G
Sbjct: 384 LSRPQAERMIVQGFFQAVLDRVPVESVVHKLESVIERKIG 423
>gi|319900396|ref|YP_004160124.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
gi|319415427|gb|ADV42538.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
Length = 447
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 166/388 (42%), Gaps = 61/388 (15%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + ++++ P DV + V+ D F
Sbjct: 42 FPTRKQEKYKYTDVSNFFEPDYGLNLNRLELPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N L S+LP GV GSL V++ + V + + D + N A D ++YV
Sbjct: 101 NKTLPKSHLPQGVIFGSLKEVAEQNPELVRKYYGKLANTAEDGVAAFNTAFAQDGVLLYV 160
Query: 198 PA--------------EGNDCYWANSVLEVVIGKGGKVR-----HS-----YLQNQSLNA 233
P G+ + N + +++ +G +VR H+ +L Q + A
Sbjct: 161 PKNVVVEKPIQLVNILRGDVDFLVNRRVLIILEEGAQVRLLACDHAMDSVNFLATQVIEA 220
Query: 234 --------------------AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 273
I V+QE S L ++ +R+ V G
Sbjct: 221 FVGENAVFDFYELEETHTSTVRISNLYVKQEAGSNVLLNGMTLHNGTTRNTTRVTLAGRH 280
Query: 274 TETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRY 331
E L + ++D+ Q + + +DH YC +L+K V F G V V
Sbjct: 281 AELNLCG--MAIADKNQHVDNNTSIDHAASYCTSNELYK-YVLDDRAVGAFAGLVLVRPG 337
Query: 332 AQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDL 391
AQ T + Q R+L A + +P L+I ADDVKCSHGA + L+E+ LFY + RGI +
Sbjct: 338 AQHTSSQQTNRNLCATRDAHMYTQPQLEIYADDVKCSHGATVGQLDETALFYMRQRGIPV 397
Query: 392 ETARKALVFSFGAEVIERFPYPSIRNQV 419
AR L+F+F EVI+ ++++++
Sbjct: 398 HEARLLLMFAFVNEVIDTIRLDALKDRL 425
>gi|365900638|ref|ZP_09438503.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
gi|365418611|emb|CCE11045.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
Length = 441
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y N+ +++V+G ++ H + + A H+ + + + GG + R+
Sbjct: 216 YQVNTAMQLVVGDEARIDHIKVTREGDGALHVASLLANVGARASFNQLGFVLGGAVVRNQ 275
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
+ ++ G T ++ LL Q D + L ++H C R+ K +V + +AVF
Sbjct: 276 LFLRLAGEGTVADIKGASLLKGAQHAD--ATLSIEHAAAECQSRETFKAVVDDT-ARAVF 332
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G + V+ AQ+TDA ++R+LLL A + KP L+I ADDV+C HG ++E F
Sbjct: 333 QGKITVSPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAIDEELRF 392
Query: 383 YFQARGIDLETARKALVFSFGAEVIE 408
Y ARGI + A L+ +F EVIE
Sbjct: 393 YLMARGIPAKEAEALLIQAFVGEVIE 418
>gi|407803616|ref|ZP_11150450.1| ABC transporter permease [Alcanivorax sp. W11-5]
gi|407022460|gb|EKE34213.1| ABC transporter permease [Alcanivorax sp. W11-5]
Length = 423
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 180/419 (42%), Gaps = 70/419 (16%)
Query: 42 ATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD 101
AT +P +QL + +L + + L + LQ +R + L T +P ++ E +++T
Sbjct: 3 ATAQEPLNVQLKQQ---ALALARAGLRED-ALQPVRRDALALLEHTEFPDKRTEQWKYTS 58
Query: 102 TSMIKSSQIQPITRPSSSLDVSTDAQFPS------LVLIDGFIQNSALNLSNLPDGVYVG 155
++ + + + R +T+A P+ LVLI+G Q + LS LPD + +
Sbjct: 59 LQVLTAGHLARVAR-------ATEAPLPAPLATHRLVLINGHYQPA---LSQLPDNITLT 108
Query: 156 SLLGVSDGIMKRVSDFISEFQCGDLFWSING-------MGAPDLGVIYVPAE-------- 200
G S + SD + W N + D VI P E
Sbjct: 109 RFDGSSALSAETASDTLRT----PFAWWNNATLHDGLQLSIADDTVIDAPVEVLLLATDD 164
Query: 201 -GNDC-------------------YWA------NSVLEVVIGKGGKVRHSYLQNQSLNAA 234
+ C Y A N+V E+V G G ++ H LQ + +
Sbjct: 165 APSHCQTRLRVQLGRHSRATLIERYAAIGPVLTNAVTELVAGAGSQLTHYRLQAEHPESL 224
Query: 235 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 294
HI + S + ++ G L R++V + + ++ L+ + V + +
Sbjct: 225 HIGTLVIAPGRDSNVQSFQLMQGNVLRRNDV--RAIMAESGASLTMSGIFVGRGNSHIDN 282
Query: 295 RLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 352
++ ++H P + QL K + + + VF+G + + A+ T+A ++LLL P A V
Sbjct: 283 QITVEHRVPHCHSEQLFKGMAGDT-ARLVFNGRIHIFEGAKGTNAELSNKNLLLTPGAEV 341
Query: 353 NVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 411
+ KP L+I DDVKCSHG L+ LFY ++RGI+ A++ L F F E++ P
Sbjct: 342 DTKPELEIYNDDVKCSHGTTCGQLDAQSLFYLRSRGIEAAEAKRMLGFGFVNELLSALP 400
>gi|154244044|ref|YP_001415002.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154158129|gb|ABS65345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 204 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 263
Y N+ LE+V+G G V + + +A H+ + + + + +TGG + R+
Sbjct: 220 AYQVNTALELVVGAGANVERVKITAEGSDAVHLATLLAKVDANATFANTFFTTGGLVVRN 279
Query: 264 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAV 321
+ G ++ LL Q D + L +DH P G R+ + ++ Q +
Sbjct: 280 QLLGHLAGEAIHARMNGVSLLSGKQHAD--TLLSVDHAAPAGESRESFRAVL-DGASQDI 336
Query: 322 FDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQL 381
F G + V + AQ+TDA L+R+LLL A KP L+I ADDV+C HG L++
Sbjct: 337 FQGKIAVRQAAQKTDARMLSRALLLTETAEACAKPELEIFADDVQCGHGCTTGTLDQQLK 396
Query: 382 FYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
FY +RGI + A L+ +F EV++ +R
Sbjct: 397 FYLMSRGIAAKEAEALLIQAFVGEVLDAIGNEGVR 431
>gi|444335325|ref|YP_007391694.1| cysteine desulfurase activator complex subunit [Blattabacterium sp.
(Blatta orientalis) str. Tarazona]
gi|444299704|gb|AGD97941.1| cysteine desulfurase activator complex subunit [Blattabacterium sp.
(Blatta orientalis) str. Tarazona]
Length = 431
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 177/434 (40%), Gaps = 67/434 (15%)
Query: 56 LEDSLPSSSSSLPQPLP-----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
L+D + SS SS + + + LR S L +PS DE ++ T+ + I + +
Sbjct: 3 LKDRIFSSLSSSKKNIHGESSYISSLRHKSIDIFLKKGFPSVTDEEWKNTNVNSILNQEY 62
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM----- 165
++ S + L+ +D +S L + DG Y S+ I
Sbjct: 63 NLFSKLSQQRKDLEYKKIKELIYLD----DSFLII--FIDGKYQSIYSHTSNNIRLSNLA 116
Query: 166 ----KRVSDFISE-FQCGDLFWSINGMGAPDLGVIYVP---------------------- 198
K++ DF + F + F +N + + D IY+P
Sbjct: 117 SQEEKKIKDFYGKLFNLDEAFNILNTIFSKDGVYIYIPDNLFLKRPIEILHIYTGIESKI 176
Query: 199 ------------------AEGNDCY-----WANSVLEVVIGKGGKVRHSYLQNQSLNAAH 235
E + C + NSV E+ ++ + +Q+ +
Sbjct: 177 MLNPRNLIIVGKSSFVKIIEHHKCLKKHLLFNNSVSEIYAFSNSQIEYYKIQDNLDELSI 236
Query: 236 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 295
I T V+Q+ S S GK R+N++ G T + L LL +Q D H+
Sbjct: 237 IDNTFVKQDLRSKCSFYTFSFQGKFIRNNLNFSSHGKFTSSYLYGISLLSGEQLVDHHTS 296
Query: 296 LLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVK 355
+ + + QL+K I+ + +F+G + V++ + A Q ++LL A + K
Sbjct: 297 MEHLYSNAHSFQLYKNILWNK-SMGIFNGKILVDKCIKNIKAFQKNNNILLSDEACIYAK 355
Query: 356 PNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSI 415
P L+I +D+VKCSHG + E LFY Q+RGI + ++ L+ SF E+++ +
Sbjct: 356 PQLEIFSDEVKCSHGCTVGSFHELDLFYCQSRGIPEKESKVLLLLSFLEEILKTMNILKL 415
Query: 416 RNQVVSHVKNLMGT 429
RN V ++K +G
Sbjct: 416 RNLVYENMKKKLGV 429
>gi|271967267|ref|YP_003341463.1| FeS assembly protein SufD [Streptosporangium roseum DSM 43021]
gi|270510442|gb|ACZ88720.1| FeS assembly protein SufD [Streptosporangium roseum DSM 43021]
Length = 372
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 7/234 (2%)
Query: 194 VIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 253
V+ + +G+ Y N +E V+G+G ++ LQ+ + +A H+ + +
Sbjct: 138 VLVLDHQGSAVYADN--VEFVVGEGATLKVISLQDWADDAVHVSHHHALLGKDATFRSFV 195
Query: 254 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ--LHKC 311
V+ GG L R + V GP + +L+ + + D Q + RLL+DH + C+ ++K
Sbjct: 196 VTLGGDLVRLSPSVSYSGPGGDADLTGLYFV--DAGQHMEHRLLVDHSQPNCKSNVVYKG 253
Query: 312 IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK-CSHG 370
+ AV+ G+V + A+ TD +L R+LLL A + PNL+I+ +V H
Sbjct: 254 ALQGEDAHAVWIGDVIIRVEAEGTDTYELNRNLLLTDGARADSVPNLEILTGEVAGAGHA 313
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 424
+A L++ +FY QARGI + AR+ ++ F A+++E+ P +R +V+ V+
Sbjct: 314 SASGRLDDEHIFYLQARGIPFDDARRLVIRGFFAQLLEKIELPELRERVLGKVE 367
>gi|320334855|ref|YP_004171566.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
gi|319756144|gb|ADV67901.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
Length = 451
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
+A +E+V+ G +VR+ +QN HI+ + + + V+ GG LSR +
Sbjct: 228 YAFGAVELVVKAGARVRYVSVQNWGKGVTHIQRQRGDVDRDATLNSLVVTMGGTLSRTEM 287
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 325
G +++E+ + + DQ D ++ P + L+K V + VF G
Sbjct: 288 QSYLRGQGSDSEMLALYFANEDQHFDHYTLQHHAAPHAHSDLLYKG-VGDNQAVGVFSGM 346
Query: 326 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 385
+KV+ AQ+TDA Q R+L+L A P L+I A+DV+CSHG+ + QLF+ +
Sbjct: 347 IKVDLGAQKTDAYQKHRTLMLSSEARNFSVPQLEINANDVRCSHGSTTGPVNAEQLFFLR 406
Query: 386 ARGIDLETARKALVFSFGAEVIERFPYPSI 415
+RGI E A K LV +F +V+ R P S+
Sbjct: 407 SRGISKEQAEKMLVTAFLEDVLSRVPLKSV 436
>gi|150003926|ref|YP_001298670.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
gi|294775082|ref|ZP_06740611.1| FeS assembly protein SufD [Bacteroides vulgatus PC510]
gi|319639843|ref|ZP_07994572.1| hypothetical protein HMPREF9011_00169 [Bacteroides sp. 3_1_40A]
gi|345518992|ref|ZP_08798425.1| FeS assembly protein SufD [Bacteroides sp. 4_3_47FAA]
gi|423312933|ref|ZP_17290869.1| FeS assembly protein SufD [Bacteroides vulgatus CL09T03C04]
gi|149932350|gb|ABR39048.1| conserved hypothetical protein, putative ABC transporter permease
component [Bacteroides vulgatus ATCC 8482]
gi|294451126|gb|EFG19597.1| FeS assembly protein SufD [Bacteroides vulgatus PC510]
gi|317388507|gb|EFV69357.1| hypothetical protein HMPREF9011_00169 [Bacteroides sp. 3_1_40A]
gi|345457304|gb|EET13935.2| FeS assembly protein SufD [Bacteroides sp. 4_3_47FAA]
gi|392686663|gb|EIY79965.1| FeS assembly protein SufD [Bacteroides vulgatus CL09T03C04]
Length = 447
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 167/390 (42%), Gaps = 65/390 (16%)
Query: 89 WPSRKDEPFRFTDTSMI----KSSQIQPITRPSS-----SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + + + P + DV + V+ D F +
Sbjct: 42 FPTRKQEKYKYTDVSKLFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTALYFVVNDAFYR 101
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
AL + LP+GV +GSL +S+ V + + D + N A D ++YV
Sbjct: 102 -KALPKAQLPEGVLLGSLKELSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYV 160
Query: 198 P----------------AEGNDCYWANSVLEVVIGKGGKVR-----HSYLQNQSLNAAHI 236
P A+ N + N + VV+ +G + R H+ L+ I
Sbjct: 161 PKGVVVDKPIQLVNILRADVN--FMVNRRVLVVLEEGAQARLLICDHAMDNVNFLSTQVI 218
Query: 237 KWTAVRQETASGYELVEVST---------------------GGKL----SRHNVHVQQLG 271
+ A T YEL E T G L +R+ V G
Sbjct: 219 EVFAKENATFDLYELEETHTSTVRFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAG 278
Query: 272 PDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVN 329
E L ++++D+ + + + +DH C +L K ++ F G V V
Sbjct: 279 RGAEINLCG--MVIADKNEQVDNHTFIDHKVADCTSNELFKYVLDDQ-ATGAFAGKVLVR 335
Query: 330 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 389
AQ T++ Q R+L A + +P L+I ADDVKCSHGA + L+E+ LFY Q RGI
Sbjct: 336 EGAQHTNSQQTNRNLCATRDAHMYTQPQLEIYADDVKCSHGATVGQLDENALFYMQQRGI 395
Query: 390 DLETARKALVFSFGAEVIERFPYPSIRNQV 419
L+ AR L+F+F EVI+ ++++++
Sbjct: 396 SLKEARLLLMFAFVNEVIDTIRLDALKDRL 425
>gi|384219154|ref|YP_005610320.1| hypothetical protein BJ6T_54770 [Bradyrhizobium japonicum USDA 6]
gi|354958053|dbj|BAL10732.1| hypothetical protein BJ6T_54770 [Bradyrhizobium japonicum USDA 6]
Length = 434
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 11/226 (4%)
Query: 201 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 260
G Y N + + +G V H L + + +A ++ V + ++TG +
Sbjct: 205 GAKAYQVNDAVILSVGDNADVAHIRLLDDAPDAVNVTSQFVTVGANTKLNFFNMTTGAAV 264
Query: 261 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV---AH 315
SR + G ++ ++ +LL +T+ + L++DH P R++ + ++ AH
Sbjct: 265 SRLQGFITLAGEGSDLSVNGVNLL--QKTEHGDTTLVVDHAVPNCISREVFRAVIDDRAH 322
Query: 316 SLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 375
S VF G + V AQ+TD +TR+LLL A + KP L+I ADDV C HGA
Sbjct: 323 S----VFQGRIIVRPDAQKTDGKMMTRALLLSDEAEADNKPELEIFADDVSCGHGATAGA 378
Query: 376 LEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVS 421
L++S LFY +ARG+ + A+ L+ +F E IE+ +R V+
Sbjct: 379 LDDSLLFYLKARGLPEKQAQALLIQAFVGEAIEQIADDGLREHVIG 424
>gi|398343330|ref|ZP_10528033.1| Fe-S cluster assembly ABC transporter permease [Leptospira inadai
serovar Lyme str. 10]
Length = 409
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 167/421 (39%), Gaps = 78/421 (18%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFR-----------FTD--- 101
L++S SSL +P L++ R ++ L P+P E +R FTD
Sbjct: 14 LKESFSEYFSSLREPDALKEFRSKANSFLEKAPFPGPHLESWRKLNLSTFKLDDFTDPCP 73
Query: 102 -TSM----------IKSSQIQP-----ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNL 145
TS+ + S+++P + R S ++ SL F + L
Sbjct: 74 QTSLEFTLNGYAEATQLSELEPENLKIVLRSLESFLSFYKNEWVSLFAASRFTHAYYIKL 133
Query: 146 SNLP-------------DGVYVGSLL------GVSDGIMKRVSDFISEFQCGDLFWSING 186
NLP +G ++ LL GV+ G ++R E + F +NG
Sbjct: 134 KNLPLEGRIPEVSVGCRNGNFILPLLIIDVPPGVTSGFLERW-----ESESSQSFLFMNG 188
Query: 187 MGAPDLGVIYVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 246
+ SVL G G R+S L+N + + T Q
Sbjct: 189 I---------------------SVL--TTGAGADFRYSSLENLGDSTFRFRTTHSYQGKD 225
Query: 247 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 306
S + + GG + + G T L + QD R+L + +
Sbjct: 226 SKFHASIATWGGYRGKAFYDGEVAGKGAWTRYVGLAPLRYREFQDTEIRILHEESHAHSS 285
Query: 307 QLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK 366
L++ + VF GN+++ + A Q+ +LLL+ A P L++ AD VK
Sbjct: 286 ILYRTAIKDK-AHNVFTGNLRIPANCKDVGAVQINNNLLLDRSARAESIPKLEVFADSVK 344
Query: 367 CSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNL 426
C HGA + ++++ QLFY +RGI E ARK +V F AEVI FP SIR ++ + +
Sbjct: 345 CEHGATVGEIDDEQLFYLASRGISKEEARKMIVEGFLAEVIREFPSESIREELTEVIHSR 404
Query: 427 M 427
M
Sbjct: 405 M 405
>gi|32491107|ref|NP_871361.1| hypothetical protein WGLp358 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166314|dbj|BAC24504.1| ynhC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 431
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 113/217 (52%), Gaps = 5/217 (2%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
Y NS + I K V + ++N+ + E S + ++ GG +S+ N
Sbjct: 205 YLNNSRTTIHIKKNSFVDFIKINQNNINSYNFSNDDFFLEKNSNFSNNVINLGGYISKQN 264
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 322
++++ P++ ++S + + +Q D+ + ++H C RQLHK I++ + +F
Sbjct: 265 INLRFNKPNSNVLINSLSIPIKNQIVDI--KTFVEHKDKNCKSRQLHKFILSDR-SKGIF 321
Query: 323 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 382
G +KV + A +TD ++LL ++++ KP L+I DDVKCSHGA + L+ LF
Sbjct: 322 HGKIKVEKNAVKTDGHMKNNNILLGEKSSIITKPQLEIYTDDVKCSHGATTNYLDSEYLF 381
Query: 383 YFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Y ++RGI + A+ ++ SF E I+ S+ N++
Sbjct: 382 YLRSRGISKKDAKILIICSFYLETIKNISCSSLFNKL 418
>gi|86148047|ref|ZP_01066349.1| cysteine desulfurase modulator [Vibrio sp. MED222]
gi|85834180|gb|EAQ52336.1| cysteine desulfurase modulator [Vibrio sp. MED222]
Length = 423
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWT-AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 273
+G G H+ + ++L+ H V AS Y + +G +L RH V + G
Sbjct: 205 VGCGAHYHHTKIVEEALSQHHFGHNDLVINAHASAYSCCLLYSG-QLIRHQVSSELTGEQ 263
Query: 274 TETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQ 333
+ S L + D + L + P Q HK I A + ++VFDG + V+ AQ
Sbjct: 264 GFVAMDSISLPQGEAVFDTRTYLKHNSPHCQSEQNHKTI-ARNQSKSVFDGMIYVDPTAQ 322
Query: 334 QTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLET 393
+TD T SL+L A VN KP L+I ADDVKCSHGA ++ +Q+ Y ++RGI E
Sbjct: 323 KTDGQMDTHSLILGDEAQVNSKPQLEIYADDVKCSHGATTGQIDPNQINYLRSRGIPKER 382
Query: 394 ARKALVFSFGAEVIERFPYPSIRNQVVSHV 423
A + +F V ER +P++R + +
Sbjct: 383 AEHMITSAFVIGVTERIKHPALRQSAIDKI 412
>gi|319404264|emb|CBI77857.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 422
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 175/398 (43%), Gaps = 45/398 (11%)
Query: 49 VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS 108
+I + E + + LP +Q +R + + T PSRK E + +TD ++
Sbjct: 9 LIAVEEDIISNFNQRIDHLPGDEVVQVIRKKAIELFQKTRLPSRKVEYWHYTDLRVL--- 65
Query: 109 QIQPITRPSSSLDVST-DAQFPSLV----------------------LIDGFIQNSALNL 145
++ ++ S D T D P + L+ +NSA
Sbjct: 66 -LKSVSEFSEFNDEQTIDKLLPENIVFSIENGKALTSNKIEGVEVENLVTALDKNSAKLN 124
Query: 146 SNLPDGVYVGSL--LGVSDGIMKRVSDFIS--------EFQCGD---LFWSINGMGAPDL 192
S + D ++G L V+DG ++SD I Q G F SI +G
Sbjct: 125 SIISDENFIGQLNTAFVTDGWFFKISDNIQLDVPIELQNIQMGGQSHTFSSIK-VGKNSQ 183
Query: 193 GVIYVPAEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI-KWTAVRQETASGYE 250
VI GND + +SV + + + ++++ +A ++ AV E A
Sbjct: 184 AVIIERQIGNDKDTFVSSVFSLDLAVNSNITWILIRDRGESATQFSQFRAVLAENAE-LT 242
Query: 251 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 310
L ++ G +L+R + ++ LG + +L + +LL DL + + +++ +
Sbjct: 243 LYVINIGSQLNRQEIDIELLGKEANFQLRAINLLSGKMHSDLTMTVRHVEEKSISKEIIR 302
Query: 311 CIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHG 370
++ + F G ++V + AQ+TDA SL+L A +VKP L+I ADDV C+HG
Sbjct: 303 NVITDK-ARGAFQGVIRVAQKAQKTDARMACNSLILSDDAEFDVKPELEIFADDVACAHG 361
Query: 371 AAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIE 408
A ++ + LFY ARGI +TA + LV F +E+I+
Sbjct: 362 ATVAKINHDHLFYLMARGISFKTACELLVKGFISELID 399
>gi|240850615|ref|YP_002972015.1| FeS assembly protein SufD [Bartonella grahamii as4aup]
gi|240267738|gb|ACS51326.1| FeS assembly protein SufD [Bartonella grahamii as4aup]
Length = 420
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 177/402 (44%), Gaps = 37/402 (9%)
Query: 49 VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS 107
++ + E++ + + LP +Q++R + + +T PSRK E + +T+ +++KS
Sbjct: 7 LLAVEENILSNFNQCVNDLPGDKAVQEIRKKTIEQFQTTRLPSRKIESWHYTNLRTLLKS 66
Query: 108 ----SQIQ---------------PITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNL 148
SQ+Q I +S++ D L D NS N+
Sbjct: 67 ISNFSQVQDNQLVDALLSESAVFSINNGKTSIESKVD-NITVKRLSDALEDNSVQINQNI 125
Query: 149 PDGVYVGSL--LGVSDGIMKRVSDF--------ISEFQCGD---LFWSINGMGAPDLGVI 195
D ++G L V+DG + + + + Q G +F I + I
Sbjct: 126 SDEDFIGQLNTAFVTDGWLFHIPENTKLNIPIELQNIQMGGQSHIFSDIKVDKNSQVMFI 185
Query: 196 YVPAEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI-KWTAVRQETASGYELVEV 254
+ + +S+ + + V ++N+ N+ ++ AV + A L +
Sbjct: 186 EHQVGSDKDTFVSSIFSLNVAADSDVTWILIRNRDFNSTQFGRFCAVLDQRAK-LSLYVI 244
Query: 255 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 314
+ G +L+R V ++ G +++ +L +LL DL + + ++ + +V
Sbjct: 245 NIGSQLNRQEVDIELQGEESDFQLRVINLLSGQTHSDLTMTVRHVEEKSTSTEIIRNVVT 304
Query: 315 HSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 374
VF G ++V++ AQ+TDA SL+L A N KP L+I ADDV C HGA ++
Sbjct: 305 DK-AVGVFQGIIRVSQKAQKTDARMACNSLILSDDAEFNAKPELEIFADDVACGHGATVA 363
Query: 375 DLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
++ LFY ARGI +TAR L+ F +E+I+ +I+
Sbjct: 364 NINHGYLFYLMARGIPFKTARALLIKGFISELIDEIKQDNIQ 405
>gi|379009651|ref|YP_005267464.1| component of SufBCD complex [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
gi|375158175|gb|AFA41241.1| component of SufBCD complex [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
Length = 427
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 27/228 (11%)
Query: 212 EVVIGKGGKVRHSYLQNQSLN-----AAHIKWTAVRQETASGYELVE------------- 253
E++ G +SYL N N +AH+ + + + + Y +
Sbjct: 188 EIIEHFLGNSHYSYLNNICTNFLLESSAHMNYLKINFDNFNSYHIANNNIILNKNTTFYN 247
Query: 254 --VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLH 309
+ GG S+ N HV ++ ++S + + Q D+++ +DH C RQLH
Sbjct: 248 HLFNLGGYFSQQNTHVCLNHEHSDVSINSLSVPSNKQIIDINT--YIDHKSRCCKSRQLH 305
Query: 310 KCIVAHS-LGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCS 368
K I++ S +G F G +KV + A +TD +LL + +N KP L+I ADDVKCS
Sbjct: 306 KMILSKSAIGN--FHGIIKVEKNAVKTDGHMKNDNLLTSKHSKINTKPELEIYADDVKCS 363
Query: 369 HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIR 416
HG+ + + LFY ++RGI A+K ++++F EV++ Y S+
Sbjct: 364 HGSTVGYMNPEHLFYLRSRGISKNHAKKMIMYAFSLEVLKNVSYKSLH 411
>gi|301308168|ref|ZP_07214122.1| FeS assembly protein SufD [Bacteroides sp. 20_3]
gi|423339831|ref|ZP_17317571.1| FeS assembly protein SufD [Parabacteroides distasonis CL09T03C24]
gi|300833638|gb|EFK64254.1| FeS assembly protein SufD [Bacteroides sp. 20_3]
gi|409228979|gb|EKN21861.1| FeS assembly protein SufD [Parabacteroides distasonis CL09T03C24]
Length = 450
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ +G + + L+ S + V+Q ++ + ++ L+R+N
Sbjct: 215 FLATQVVEIFAEEGARFDYYDLEESSESTTRFSSVHVKQAASTNVLVNGITLTNGLTRNN 274
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFD 323
+V+ G E+ L +L +Q D +S + P +L K ++ H++G VF
Sbjct: 275 YYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFKNVLNDHAVG--VFS 332
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ LFY
Sbjct: 333 GRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFY 392
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Q+RGI + AR L +F ++VI+ ++++++
Sbjct: 393 MQSRGIPRDEARMLLSVAFTSDVIDHVRLEALKDRL 428
>gi|150010118|ref|YP_001304861.1| ABC transporter [Parabacteroides distasonis ATCC 8503]
gi|149938542|gb|ABR45239.1| putative ABC transporter protein [Parabacteroides distasonis ATCC
8503]
Length = 450
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 205 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 264
+ A V+E+ +G + + L+ S + V+Q ++ + ++ L+R+N
Sbjct: 215 FLATQVVEIFAEEGARFDYYDLEESSESTTRFSSVHVKQAASTNVLVNGITLTNGLTRNN 274
Query: 265 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFD 323
+V+ G E+ L +L +Q D +S + P +L K ++ H++G VF
Sbjct: 275 YYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFKNVLNDHAVG--VFS 332
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G + V AQ+T A Q R+L A + KP L+I ADDVKCSHG L+E+ LFY
Sbjct: 333 GRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFY 392
Query: 384 FQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 419
Q+RGI + AR L +F ++VI+ ++++++
Sbjct: 393 MQSRGIPRDEARMLLSVAFTSDVIDHVRLEALKDRL 428
>gi|379736613|ref|YP_005330119.1| Iron-regulated ABC transporter permease protein [Blastococcus
saxobsidens DD2]
gi|378784420|emb|CCG04088.1| Iron-regulated ABC transporter permease protein [Blastococcus
saxobsidens DD2]
Length = 439
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 168/383 (43%), Gaps = 79/383 (20%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS-NL 148
P+ ++E +RFT IK L+DG ++ L S +L
Sbjct: 79 PTGREETWRFTPMKRIKP-------------------------LLDGADSDARLTWSTDL 113
Query: 149 PDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAEG------- 201
P+GV V + + D ++K + D + D ++ + V+ VPAE
Sbjct: 114 PEGVEV-TRVDAGDPLLKGLPDPV------DRLAALARQRSAGADVVRVPAEAQLDRPVS 166
Query: 202 --------NDCYWANSVLEV------------------------VIGKGGKVRHSYLQNQ 229
++ W V+EV ++G G +V +Q+
Sbjct: 167 LGLAGTGSDEVVWGQLVVEVGPFAKATVVLDHSGLARYAGGVTVLVGDGAQVTLVSVQDW 226
Query: 230 SLNAAHI-KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 288
+ A H ++ AV A+ ++ V V+ GG L R +VQ GP EL F + SD+
Sbjct: 227 APGAVHGGQYDAVIGRDAT-FKQVVVTLGGDLVRLVSNVQYAGPGGSAEL--FGVYFSDE 283
Query: 289 TQDLHSRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLL 346
TQ RL +DH C L+K + + V+ G+V++ A T+ +L R+L+L
Sbjct: 284 TQHQEHRLWVDHAVPNCTSNVLYKGALQGEGARTVWIGDVRIRPAATGTETYELNRNLVL 343
Query: 347 EPRATVNVKPNLQI-IADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAE 405
A + PNL+I + V H +A ++ QLFY +RGID ETAR+ +V F A+
Sbjct: 344 TDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLCSRGIDAETARRLVVRGFFAD 403
Query: 406 VIERFPYPSIRNQVVSHVKNLMG 428
V++ P +++++++ + +G
Sbjct: 404 VVQHIGLPELQDRLMASIDERLG 426
>gi|312115588|ref|YP_004013184.1| FeS assembly protein SufD [Rhodomicrobium vannielii ATCC 17100]
gi|311220717|gb|ADP72085.1| FeS assembly protein SufD [Rhodomicrobium vannielii ATCC 17100]
Length = 441
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Query: 206 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 265
W+ + L+ IGKG ++H+ L + T E A YE + GG L+R
Sbjct: 221 WSYTALD--IGKGAALKHARLTQSAAALHLASATVTLGERAV-YEPTHAAIGGALTRSEG 277
Query: 266 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 323
++ GP+ + L D L++DH +C R+L K ++ + VF
Sbjct: 278 TIRFTGPNARATYNGAILARGHSHVDF--TLVVDHAAPHCESRELVKAVL-DDRAKGVFQ 334
Query: 324 GNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFY 383
G V V R AQ+TD Q+ +LLL A + KP L+I ADDV C HGA L+E +FY
Sbjct: 335 GKVAVQRGAQKTDGKQMANALLLSNDAEFDSKPELEIFADDVVCGHGATAGQLDEDLMFY 394
Query: 384 FQARGIDLETARKALVFSF 402
+ARGI AR L+ +F
Sbjct: 395 LRARGIPEAQARALLIAAF 413
>gi|294013381|ref|YP_003546841.1| Fe-S cluster assembly protein SufD [Sphingobium japonicum UT26S]
gi|292676711|dbj|BAI98229.1| Fe-S cluster assembly protein SufD [Sphingobium japonicum UT26S]
Length = 250
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Query: 215 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 274
+ G RH LQ+ + AA + A+ + + ++ GGKL R V LG +
Sbjct: 36 VAAGENARHHLLQDAADGAAAVHDYAITVADGARCDFHILNIGGKLGRVTFAVT-LGKGS 94
Query: 275 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNRYAQ 333
EL+ + DQ ++ + + P Q + I+ H+ G + G++ V R AQ
Sbjct: 95 HFELNGAIIGGGDQVLEIVTAVTHAQPDATSGQTIRSILGQHATGS--YLGSINVARDAQ 152
Query: 334 QTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLET 393
+TDA Q +++LL+ AT N KP L+I ADDVKC+HGA + +L++ LFY +RG+D T
Sbjct: 153 RTDAFQSVKAMLLDRTATANAKPELEIYADDVKCAHGATVGELDQQALFYMASRGMDPAT 212
Query: 394 ARKALVFSFGAEVIERFPYPSIRNQV 419
A+ L+ +F A V + ++++ +
Sbjct: 213 AKTLLLKAFVAGVFDDVADEAVKDSL 238
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,627,378,635
Number of Sequences: 23463169
Number of extensions: 275263173
Number of successful extensions: 694884
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4692
Number of HSP's successfully gapped in prelim test: 526
Number of HSP's that attempted gapping in prelim test: 685862
Number of HSP's gapped (non-prelim): 6097
length of query: 435
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 290
effective length of database: 8,957,035,862
effective search space: 2597540399980
effective search space used: 2597540399980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)