RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 013862
(435 letters)
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK;
1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A*
2wug_A* 2vf2_A
Length = 291
Score = 66.2 bits (162), Expect = 2e-12
Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQMT 94
V LVG +LG A+ A P L+L P L +
Sbjct: 107 RVPLVGNALGGGTAVRFALDYP--ARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164
Query: 95 LTLSYL---LSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
T L L ++ D + +V F ++ E AM A +
Sbjct: 165 PTRENLEAFLRVMVYDK-NLITPELVDQRFALASTPESLTATRAM---GKSFAGADFEAG 220
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
++W + ++ L++ D++ P + + +P Q FG
Sbjct: 221 MMW-------------REVYRLRQPVLLIWGREDRVNPL-DGALVALKTIPRAQLHVFGQ 266
Query: 212 GGHFLFLED 220
GH++ +E
Sbjct: 267 CGHWVQVEK 275
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase,
putative lipase; HET: CME CSO; 1.90A {Saccharomyces
cerevisiae} PDB: 2y6v_A*
Length = 398
Score = 67.1 bits (163), Expect = 3e-12
Identities = 36/212 (16%), Positives = 71/212 (33%), Gaps = 12/212 (5%)
Query: 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77
+LK+ + S + S ++G S+G ALA P++ +LIL P RK++
Sbjct: 121 VLKIATCELGSID--SHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAI 178
Query: 78 LQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMS 137
+P + L S L + ++ + + +
Sbjct: 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDF 238
Query: 138 SYLPVLANILPKETLLWKLELLKSASAYAN---------ARLDAVKAQTLILCSGRDQLL 188
+ + K+E ++ Y N + + V+ +T+ + R
Sbjct: 239 ERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWC 298
Query: 189 PSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
P + L + L N GG H + +E
Sbjct: 299 P-PQNQLFLQKTLQNYHLDVIPGGSHLVNVEA 329
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene,
isopropylbenzene, META-cleavage compound hydrolase;
1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB:
1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A
2d0d_A
Length = 282
Score = 65.8 bits (161), Expect = 3e-12
Identities = 33/185 (17%), Positives = 64/185 (34%), Gaps = 23/185 (12%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL- 95
++VG + G LA+A A R + ++L A + + ++
Sbjct: 96 KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAG-----TRFDVTEGLNAVWGYTPSIE 150
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
+ LL + D + D + + + S + F +M
Sbjct: 151 NMRNLLDIFAYDR-SLVTDELARLRYEASIQPGFQESFSSM---------------FPEP 194
Query: 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHF 215
+ A A ++ + + +TLI+ DQ++P RL + Q FG GH+
Sbjct: 195 RQRWIDALASSDEDIKTLPNETLIIHGREDQVVPL-SSSLRLGELIDRAQLHVFGRCGHW 253
Query: 216 LFLED 220
+E
Sbjct: 254 TQIEQ 258
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase);
PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Length = 285
Score = 65.8 bits (161), Expect = 3e-12
Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 23/188 (12%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
++VG S+G + L + P+ + L P ++
Sbjct: 103 EKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSV------------GAPMNARPPELAR 150
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAM---SSYLPVLANILPKETL 152
L++ DP ++ ++ V + P + I E +
Sbjct: 151 LLAFY-----ADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQ--EVM 203
Query: 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
++ + A L + L+ +D+++P + L + L + +
Sbjct: 204 FESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPL-DTSLYLTKHLKHAELVVLDRC 262
Query: 213 GHFLFLED 220
GH+ LE
Sbjct: 263 GHWAQLER 270
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META
cleavage product hydrolase, histidine tagged protein,
alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP:
c.69.1.10
Length = 296
Score = 64.3 bits (157), Expect = 1e-11
Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 25/186 (13%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
V +VG S+G L V+ + ++ L+L A L+ I +++ T
Sbjct: 106 GKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSA-----GLVVEIHEDLRPIINYDFTR 160
Query: 96 -TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154
+ +L+ LT D D+++ + +T + + +VA ++ +
Sbjct: 161 EGMVHLVKALTNDG-FKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDP---- 215
Query: 155 KLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGH 214
+ V+ TL++ D+++P E + + + GH
Sbjct: 216 -------------EFIRKVQVPTLVVQGKDDKVVPV-ETAYKFLDLIDDSWGYIIPHCGH 261
Query: 215 FLFLED 220
+ +E
Sbjct: 262 WAMIEH 267
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond
hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia
xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A*
3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Length = 286
Score = 64.3 bits (157), Expect = 1e-11
Identities = 36/190 (18%), Positives = 62/190 (32%), Gaps = 27/190 (14%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+LVG ++G AL A P D + LIL P M L
Sbjct: 104 DRAHLVGNAMGGATALNFALEYP--DRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYA 161
Query: 94 TLTLSYL---LSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKE 150
+ L L + D + + ++ Q R + +L +
Sbjct: 162 EPSYETLKQMLQVFLYDQ-SLITEELL---------QGRWEAIQRQPEHL---------K 202
Query: 151 TLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFG 210
L + ++ ARL +KA+T I D+ +P + G +L + + + F
Sbjct: 203 NFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPL-DHGLKLLWNIDDARLHVFS 261
Query: 211 GGGHFLFLED 220
G + E
Sbjct: 262 KCGAWAQWEH 271
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta
hydrolase fold; 2.10A {Escherichia coli}
Length = 289
Score = 62.7 bits (153), Expect = 3e-11
Identities = 35/190 (18%), Positives = 63/190 (33%), Gaps = 27/190 (14%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
++L+G S+G ++A + P + V L+L T L
Sbjct: 107 AKIHLLGNSMGGHSSVAFTLKWP--ERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYR 164
Query: 94 TLTLSYL---LSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKE 150
T+ L + + D D++ + R + ++ +L L
Sbjct: 165 QPTIENLKLMMDIFVFDT-SDLTDALF---------EARLNNMLSRRDHLENFVKSLEAN 214
Query: 151 TLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFG 210
+ RL +KAQTLI+ D+ +P + G RL + + F
Sbjct: 215 PKQFPD---------FGPRLAEIKAQTLIVWGRNDRFVPM-DAGLRLLSGIAGSELHIFR 264
Query: 211 GGGHFLFLED 220
GH+ E
Sbjct: 265 DCGHWAQWEH 274
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2,
structural genomics, protein structure initiative,
midwest for structural genomics; 2.00A {Oenococcus oeni}
Length = 272
Score = 62.0 bits (151), Expect = 6e-11
Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 20/183 (10%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96
L G S G LA A+A D L + L P + S + + ++ +
Sbjct: 90 RFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHS--KRLTGKHINILEEDINPV 147
Query: 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156
+ + D + + + + Q+ + +T + +L
Sbjct: 148 EN----------KEYFADFLSMNVIINNQAWHDYQNLIIP-------GLQKEDKTFIDQL 190
Query: 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFL 216
+ S + + + I+ DQ++ +E +L N + GH L
Sbjct: 191 QNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGY-QEQLKLINHNENGEIVLLNRTGHNL 249
Query: 217 FLE 219
++
Sbjct: 250 MID 252
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE PGE; 1.96A {Bacillus subtilis}
Length = 306
Score = 61.6 bits (150), Expect = 1e-10
Identities = 22/187 (11%), Positives = 50/187 (26%), Gaps = 32/187 (17%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSF---RKSLLQTIMPIPAELMSGQM 93
+++G SLG + R P+ + +PA +F + + + A
Sbjct: 135 KSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASN----- 189
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+ L+ + D + + + P
Sbjct: 190 --GVETFLNWMMNDQNVLHPI-------FVKQFKAGVMWQDGSRNPNPNADGF------- 233
Query: 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGG 213
+ + L + + L+L + + R +P+ + G
Sbjct: 234 --------PYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAG 285
Query: 214 HFLFLED 220
H L +E
Sbjct: 286 HVLSMEQ 292
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo
sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Length = 254
Score = 56.5 bits (137), Expect = 3e-09
Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 41/187 (21%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ V L+G S G AL AA+ P + +++ + M +
Sbjct: 94 KKVSLLGWSDGGITALIAAAKYPS--YIHKMVIWGANAYVT----------DEDSMIYEG 141
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+S + + ++++ + T ++
Sbjct: 142 IRDVSKWS-----ERTRKPLEALYGYDYFARTCEKWVDGIRQFKH--------------- 181
Query: 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGG 213
L V+ LI+ +D L+P D + + + + G
Sbjct: 182 ------LPDGNICRHLLPRVQCPALIVHGEKDPLVP-RFHADFIHKHVKGSRLHLMPEGK 234
Query: 214 HFLFLED 220
H L L
Sbjct: 235 HNLHLRF 241
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI,
protei structure initiative; HET: MSE 3OH; 1.70A
{Escherichia coli} SCOP: c.69.1.26
Length = 258
Score = 56.5 bits (137), Expect = 3e-09
Identities = 34/186 (18%), Positives = 61/186 (32%), Gaps = 21/186 (11%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQMT 94
+G SLG +A +A +P+ V L+ + F + G
Sbjct: 75 KAIWLGWSLGGLVASQIALTHPE--RVRALVTVASSPCF----------SARDEWPGIKP 122
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154
L+ L+ D + + T ++ ++ LP+ + L
Sbjct: 123 DVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMP----EVDVLNG 178
Query: 155 KLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGH 214
LE+LK+ L V L L D L+P + L + P+ ++ F H
Sbjct: 179 GLEILKTVDLRQ--PLQNVSMPFLRLYGYLDGLVPRKV-VPMLDKLWPHSESYIFAKAAH 235
Query: 215 FLFLED 220
F+
Sbjct: 236 APFISH 241
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, mycobac smegmatis; 1.90A {Mycobacterium
smegmatis}
Length = 330
Score = 56.2 bits (136), Expect = 6e-09
Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 11/187 (5%)
Query: 38 VYLVGESLGACLALAVAARNPDMDLVLILANPATS---FRKSLLQTIMPIPAELMSGQMT 94
+++G+S G L +A R P + L + N S + ++ +PAE +
Sbjct: 128 YHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAET---RAA 184
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQ-STIQERSQDFVAMSSYLPVLANILPKETLL 153
L +T A + + + D VA P + + +
Sbjct: 185 LDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEF 244
Query: 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGG 213
+ L S RL V A L++ D+ P + +P+ ++ F G
Sbjct: 245 HVVGTLGDWSV--IDRLPDVTAPVLVIAGEHDEATP--KTWQPFVDHIPDVRSHVFPGTS 300
Query: 214 HFLFLED 220
H LE
Sbjct: 301 HCTHLEK 307
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad,
rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A
3dyi_A 3dyv_A 3e1g_A
Length = 251
Score = 54.5 bits (131), Expect = 1e-08
Identities = 28/197 (14%), Positives = 58/197 (29%), Gaps = 51/197 (25%)
Query: 32 RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91
+ V++ G SLG A+ P + + ++P + L+ + +
Sbjct: 89 TAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNR- 147
Query: 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
+ +S + + +YLP
Sbjct: 148 ----------------------------------LAGKSDESTQILAYLP---------- 163
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR--- 208
+L + + A L+ VK T I +G+D+L+ +L AL N
Sbjct: 164 --GQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDG-RLAYQLRDALINAARVDFHW 220
Query: 209 FGGGGHFLFLEDGVDLV 225
+ H + + +
Sbjct: 221 YDDAKHVITVNSAHHAL 237
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics,
PSI-biology, protein structure initiati alpha/beta
hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Length = 262
Score = 54.7 bits (132), Expect = 1e-08
Identities = 29/179 (16%), Positives = 53/179 (29%), Gaps = 20/179 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
++ G S GA L+L AA + + + P + + P+P + +
Sbjct: 87 GAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYA-----VDDSRPPVPPDYQTR---- 137
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
L +LL A+ + D VA P+ + L
Sbjct: 138 ----LDALLAEGRRGDAVTYFMTEGV------GVPPDLVAQMQQAPMWPGMEAVAHTLPY 187
Query: 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGH 214
+ + AR ++ TL++ G L +PN + H
Sbjct: 188 DHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHT-AQELADTIPNARYVTLENQTH 245
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.10A {Escherichia coli SE11}
Length = 268
Score = 54.2 bits (131), Expect = 2e-08
Identities = 41/185 (22%), Positives = 63/185 (34%), Gaps = 21/185 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
+VG +LGA + + +A P VLI N + L SG
Sbjct: 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQA 141
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
+ ++ L+ + R+ A LA+ K LL +
Sbjct: 142 WV----------------EAQPLFLYPADWMAARAPRLEAED--ALALAHFQGKNNLLRR 183
Query: 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHF 215
L LK A D ++ I+C+ D L+P+ L ALP+ Q GGH
Sbjct: 184 LNALKRADFS--HHADRIRCPVQIICASDDLLVPT-ACSSELHAALPDSQKMVMPYGGHA 240
Query: 216 LFLED 220
+ D
Sbjct: 241 CNVTD 245
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 55.8 bits (134), Expect = 2e-08
Identities = 80/410 (19%), Positives = 129/410 (31%), Gaps = 147/410 (35%)
Query: 72 SFRKSLLQTIMPIPAELM------SGQMTLT---LSYLLSLLTGDPLKMAMDSIVKGLFL 122
F K L P P E + L L Y+ SL+ + D ++
Sbjct: 36 QFNKIL-----PEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVG-QFDQVLNLCL- 88
Query: 123 QSTIQERSQDFVAMSSYLP------VLANILPKE--TLLWKLELLKSASAYANARLDAVK 174
+F + YL + A +L + TL+ EL+K+ Y AR+ A +
Sbjct: 89 --------TEFE--NCYLEGNDIHALAAKLLQENDTTLVKTKELIKN---YITARIMAKR 135
Query: 175 AQTLILCSGRDQLLPSEEEGD-RLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233
S L + EG+ +L A+ FGG
Sbjct: 136 PFDKKSNSA---LFRAVGEGNAQLV-AI-------FGG---------------------- 162
Query: 234 YRRGRIVDYVSDFIPPTTIEVNKVYEEYRWMV-DL--TSSVMLSTLPDGKIVRGLSGIPS 290
+G DY E+ +Y+ Y +V DL S+ LS L +
Sbjct: 163 --QGNTDDYFE--------ELRDLYQTYHVLVGDLIKFSAETLSEL--------IRTTLD 204
Query: 291 EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRA-IAHPMVFFNAKDGGLPDLVTY-DTF 348
V G ++L LE P +++ L+ I+ P++ G+ L Y T
Sbjct: 205 AEKVFTQGLNILEWLENPSNTP----DKDYLLSIPISCPLI-------GVIQLAHYVVTA 253
Query: 349 RIMGSVP-----------------VSAI---------NFYKLVSSKAHVLLYPGGVR--E 380
+++G P V+A+ +F+ V VL + GVR E
Sbjct: 254 KLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFI-GVRCYE 312
Query: 381 AFHRKGEEYKLFWPESSEFVRVAAAFGGKIVP---FGVVGEDDLAQVIKL 427
A+ P E + + VP + QV
Sbjct: 313 AYPNTS-----LPPSILE----DSLENNEGVPSPMLSISNL-TQEQVQDY 352
Score = 38.1 bits (88), Expect = 0.007
Identities = 18/142 (12%), Positives = 46/142 (32%), Gaps = 41/142 (28%)
Query: 213 GH-------------FLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEVNKVYE 259
GH + +E V++V + RG + +P E+ +
Sbjct: 1761 GHSLGEYAALASLADVMSIESLVEVV--------FYRGM---TMQVAVPRD--ELGR--S 1805
Query: 260 EYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSE-GPVLLVGNH-----------MLLGLEA 307
Y M+ + + ++ + + + G ++ + N+ L L+
Sbjct: 1806 NYG-MIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDT 1864
Query: 308 LPMVPTFVIERNILVRAIAHPM 329
+ V F+ + I + + +
Sbjct: 1865 VTNVLNFIKLQKIDIIELQKSL 1886
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free
haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12
PDB: 1hl7_A*
Length = 279
Score = 54.0 bits (130), Expect = 2e-08
Identities = 38/190 (20%), Positives = 61/190 (32%), Gaps = 19/190 (10%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
R V LVG S+G AR + V L F +P E+ G
Sbjct: 90 RDVVLVGFSMGTGELARYVARYGH-ERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDG-- 146
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+ + GD D L + R + S+ + + P
Sbjct: 147 ------IEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSA-PVAAY- 198
Query: 154 WKLELLKSASAYANARLDAVKAQ---TLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFG 210
++ + + ++AV+A TLIL +D +LP + R +A+P
Sbjct: 199 ---AVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVE 255
Query: 211 GGGHFLFLED 220
G H L
Sbjct: 256 GAPHGLLWTH 265
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure
initiative, PSI-2, structural midwest center for
structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus
anthracis}
Length = 278
Score = 53.9 bits (130), Expect = 3e-08
Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 25/190 (13%)
Query: 38 VYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLTL 97
G S G LAL A + +I+ A S + + + + ++ +
Sbjct: 93 WGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRI---V 149
Query: 98 SYLLSLLTGDPLKMAMDSIVKGLFLQSTI-QERSQDFVAMSSYLPVLA-------NILPK 149
S + +L ++ ++ + L S +E+ ++ + + + + + K
Sbjct: 150 SIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYK 209
Query: 150 ETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRF 209
+ + +L VK + I C D P + +PN +F
Sbjct: 210 DYDVR-------------QKLKFVKIPSFIYCGKHDVQCP-YIFSCEIANLIPNATLTKF 255
Query: 210 GGGGHFLFLE 219
H F+E
Sbjct: 256 EESNHNPFVE 265
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta
hydrolase, PLP degradation, E-2-
(acetamidomethylene)succinate; 2.26A {Mesorhizobium
loti}
Length = 314
Score = 52.4 bits (126), Expect = 1e-07
Identities = 27/187 (14%), Positives = 51/187 (27%), Gaps = 22/187 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
LVG SLGA ++ AA+ PD LV ++ + I E +
Sbjct: 134 GHAILVGHSLGARNSVTAAAKYPD--LVRSVVAIDFTP-----------YIETEALDALE 180
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+ ++ + + + + + L LA+
Sbjct: 181 ARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTA 240
Query: 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGG 213
L + V LI+ +L+ + R P+ G
Sbjct: 241 RGLR------SDLVPAYRDVTKPVLIVRGESSKLVS-AAALAKTSRLRPDLPVVVVPGAD 293
Query: 214 HFLFLED 220
H++
Sbjct: 294 HYVNEVS 300
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase,
polyketide, tailoring enzyme, structural proteomics in
europe, spine; HET: AKT 1PE; 1.45A {Streptomyces
purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Length = 298
Score = 52.2 bits (125), Expect = 1e-07
Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 10/192 (5%)
Query: 36 RPVYLVGESLGACLALAVAARNPD--MDLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93
++VG S+GA + +A + D L ++L + ++ +M L
Sbjct: 94 DRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPG 153
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANI-----LP 148
L P + + K + + F I +
Sbjct: 154 PQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVL 213
Query: 149 KETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR 208
E L S A L V TL++ + D + P+ G L +P +
Sbjct: 214 AEPYAHYSLTLPPPSRA--AELREVTVPTLVIQAEHDPIAPA-PHGKHLAGLIPTARLAE 270
Query: 209 FGGGGHFLFLED 220
G GH L
Sbjct: 271 IPGMGHALPSSV 282
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for
structu genomics, MCSG, alpha-beta hydrolase fold,
hydrolase; 2.00A {Oleispira antarctica}
Length = 282
Score = 51.5 bits (124), Expect = 2e-07
Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 27/188 (14%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
V ++G S+ + +A + D + + P+ F M P + + G
Sbjct: 98 VNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCF--------MNFPPDYVGGFERD 149
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
L L++L+ + + A + + S E + +
Sbjct: 150 DLEELINLMDKNYIGWANY-LAPLVMGASHSSELIGELSGSFCTTDPIV----------- 197
Query: 156 LELLKSASAYAN----ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
A A + L+ + LI S +D L E G + +PN Q
Sbjct: 198 --AKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLAS-PEVGQYMAENIPNSQLELIQA 254
Query: 212 GGHFLFLE 219
GH L +
Sbjct: 255 EGHCLHMT 262
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase
fold, carboxylesterase, Ser- hydrolase; 2.00A
{Streptococcus mutans}
Length = 292
Score = 51.5 bits (123), Expect = 2e-07
Identities = 23/183 (12%), Positives = 47/183 (25%), Gaps = 20/183 (10%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96
L S+G AL + ++ L I P T+M A S
Sbjct: 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT---------TVMIYRAGFSSDLYPQL 161
Query: 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156
L T + + + F ++ + + L + + L
Sbjct: 162 ALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQS-------LPDF 214
Query: 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFL 216
++ + + K +++ + E E + G H+L
Sbjct: 215 KIRLALGEEDFKTGISEKIPSIVFSESFREKEYLESE---YLNKHTQTKL-ILCGQHHYL 270
Query: 217 FLE 219
Sbjct: 271 HWS 273
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate
complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Length = 273
Score = 51.2 bits (123), Expect = 2e-07
Identities = 29/189 (15%), Positives = 48/189 (25%), Gaps = 19/189 (10%)
Query: 36 RPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
R L G S G R L + +P E+ G
Sbjct: 86 RDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDG--- 142
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTI--QERSQDFVAMSSYLPVLANILPKETL 152
+ D ++ D + G F + S V
Sbjct: 143 -----IRQASLADRSQLYKD-LASGPFFGFNQPGAKSSAGMVDW------FWLQGMAAGH 190
Query: 153 LWKLELLKSASAY-ANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
+ +K+ S L + TL++ DQ++P E G + + + G
Sbjct: 191 KNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSG 250
Query: 212 GGHFLFLED 220
H L
Sbjct: 251 APHGLTDTH 259
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural
genomics, joint center structural genomics, JCSG; HET:
MSE; 1.50A {Pseudomonas aeruginosa}
Length = 315
Score = 51.0 bits (122), Expect = 3e-07
Identities = 30/206 (14%), Positives = 57/206 (27%), Gaps = 41/206 (19%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
++G S+G LA A P L+L NP + G
Sbjct: 114 ARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI------------GLEDWKALGVPWR 161
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
++ L+ + + I + E +F + +E++ W
Sbjct: 162 SVDDWYRRD----LQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWN 217
Query: 156 LELLKSASAYAN------ARLDAVKAQTLILCSGRDQLLPSE---------------EEG 194
+ + LD ++ TL+L +D + + G
Sbjct: 218 S----ALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLG 273
Query: 195 DRLCRALPNCQTRRFGGGGHFLFLED 220
R +P F GH ++
Sbjct: 274 KDAARRIPQATLVEFPDLGHTPQIQA 299
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase,
hydrolase; 1.90A {Mycobacterium tuberculosis} PDB:
3e3a_A 3hys_A 3hzo_A
Length = 293
Score = 50.8 bits (122), Expect = 3e-07
Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 18/184 (9%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
P +VG S+GA +A + P++ +L + +
Sbjct: 110 APARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRL---------DRARQFFNKAEAE 160
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
+ L + + L D++AM S P+ L +
Sbjct: 161 LYDSGVQLPPTYDARARLLENFSRKTLND--DVAVGDWIAMFSMWPIK----STPGLRCQ 214
Query: 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHF 215
L+ + + A L++ D + P G + ALPN + + GH
Sbjct: 215 LDCAPQTNRLP--AYRNIAAPVLVIGFADDVVTP-PYLGREVADALPNGRYLQIPDAGHL 271
Query: 216 LFLE 219
F E
Sbjct: 272 GFFE 275
>3e0x_A Lipase-esterase related protein; APC60309, clostridium
acetobutylicum ATCC 824, structural genomics, PSI-2;
HET: MSE; 1.45A {Clostridium acetobutylicum}
Length = 245
Score = 50.0 bits (120), Expect = 4e-07
Identities = 25/187 (13%), Positives = 54/187 (28%), Gaps = 41/187 (21%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ + L+G S+G + L VA + V ++ + F + + M
Sbjct: 84 KNITLIGYSMGGAIVLGVALKKLP--NVRKVVSLSGGARF--------DKLDKDFMEKIY 133
Query: 94 TLTLS-YLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETL 152
L L G + + L+ D +A +++
Sbjct: 134 HNQLDNNYLLECIGGIDNPLSEKYFE--TLEKDPDIMINDLIACKLI-----DLVD---- 182
Query: 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
L + + + + L E + + + + N + + F G
Sbjct: 183 ----------------NLKNIDIPVKAIVAKDELLTL-VEYSEIIKKEVENSELKIFETG 225
Query: 213 GHFLFLE 219
HFL +
Sbjct: 226 KHFLLVV 232
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida}
PDB: 4dgq_A
Length = 276
Score = 49.6 bits (119), Expect = 6e-07
Identities = 32/199 (16%), Positives = 61/199 (30%), Gaps = 41/199 (20%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ VG S G + AR+P+ D V +L +P + G
Sbjct: 89 QGAVHVGHSTGGGEVVRYMARHPE-DKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDG-- 145
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTI--QERSQDFVAMSSYLPVLANILPKET 151
+ + + + + G F E S+ +
Sbjct: 146 ------FQAQVASNRAQF-YRDVPAGPFYGYNRPGVEASEGIIGNW-------------- 184
Query: 152 LLWKLELLKSASAYANA-----------RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRA 200
W+ ++ SA A+ + L ++ L++ DQ++P E G +
Sbjct: 185 --WRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKL 242
Query: 201 LPNCQTRRFGGGGHFLFLE 219
LPN + + G H +
Sbjct: 243 LPNGALKTYKGYPHGMPTT 261
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta
hydrolase, signaling protein; 2.50A {Bacillus subtilis}
PDB: 1wpr_A*
Length = 271
Score = 49.5 bits (119), Expect = 6e-07
Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 31/190 (16%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ VG S+GA + + + R P +L L++ P+ + + E + G
Sbjct: 90 KETVFVGHSVGALIGMLASIRRP--ELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLG-- 145
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
LL ++ + + A + Q E ++ + +
Sbjct: 146 ------LLEMMEKNYIGWA-TVFAATVLNQPDRPEIKEELESRFCSTDPVI--------- 189
Query: 154 WKLELLKSASAYAN----ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRF 209
+ A A L V +LIL D + P+ G + + LP ++
Sbjct: 190 ----ARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPA-TVGKYMHQHLPYSSLKQM 244
Query: 210 GGGGHFLFLE 219
GH +
Sbjct: 245 EARGHCPHMS 254
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta
hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP:
c.69.1.29 PDB: 1r1d_A* 4diu_A
Length = 247
Score = 49.0 bits (117), Expect = 1e-06
Identities = 27/196 (13%), Positives = 60/196 (30%), Gaps = 45/196 (22%)
Query: 32 RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91
+ + G SLG +L + P +V + A +++ + +
Sbjct: 82 NKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGV---------- 131
Query: 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
L Y + ++ Q+ P +T
Sbjct: 132 -----LEYAREYKKREGKS---------------EEQIEQEMEKFKQT--------PMKT 163
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL--PNCQTRRF 209
L L+ A LD + A T ++ + D+++ + + + + P Q + +
Sbjct: 164 LKA----LQELIADVRDHLDLIYAPTFVVQARHDEMINP-DSANIIYNEIESPVKQIKWY 218
Query: 210 GGGGHFLFLEDGVDLV 225
GH + L+ D +
Sbjct: 219 EQSGHVITLDQEKDQL 234
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone
biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Length = 269
Score = 48.8 bits (117), Expect = 1e-06
Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 22/188 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDM--DLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ + L G S+G +AL A +L+L +P + L+ + A
Sbjct: 83 KSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDA------- 135
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+L +++ ++ K QS ++ + + L+ +
Sbjct: 136 ------RAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQR--LSQ--SPHKMA 185
Query: 154 WKLELLKSAS-AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
L + RL +K TLIL D+ + ++ +PN + +
Sbjct: 186 KALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV--QIAKKMANLIPNSKCKLISAT 243
Query: 213 GHFLFLED 220
GH + +ED
Sbjct: 244 GHTIHVED 251
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta
hydrolase fold, mutant M99T; 1.50A {Streptomyces
aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Length = 277
Score = 49.2 bits (118), Expect = 1e-06
Identities = 31/189 (16%), Positives = 51/189 (26%), Gaps = 19/189 (10%)
Query: 36 RPVYLVGESLGACLALAVAAR-NPDM--DLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92
+ LVG S G + + + A+ K+ P E G
Sbjct: 90 QDAVLVGFSTGTGEVARYVSSYGTARIAKVAFL-ASLEPFLLKTDDNPDGAAPQEFFDG- 147
Query: 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQER-SQDFVAMSSYLPVLANILPKET 151
+++ + D L + R S++ V S N
Sbjct: 148 -------IVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNS------WNTAASGG 194
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
+ A + + LIL D+ LP E +ALP+ + G
Sbjct: 195 FFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEG 254
Query: 212 GGHFLFLED 220
H L
Sbjct: 255 APHGLLWTH 263
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog,
hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas
fluorescens} PDB: 1va4_A 3hi4_A 3hea_A
Length = 271
Score = 48.8 bits (117), Expect = 1e-06
Identities = 30/197 (15%), Positives = 55/197 (27%), Gaps = 37/197 (18%)
Query: 36 RPVYLVGESLG-ACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
+ V LVG S+G +A +A L+L T + G
Sbjct: 86 KEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPL--------FGQKPDYPQGVPL 137
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154
+ + L D + D + + Q SQ
Sbjct: 138 DVFARFKTELLKDRAQFISD-FNAPFYGINKGQVVSQGVQTQ----------------TL 180
Query: 155 KLELLKSASAYANA-----------RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN 203
++ LL S A + + + TL++ DQ++P E G +
Sbjct: 181 QIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKG 240
Query: 204 CQTRRFGGGGHFLFLED 220
+ + + H +
Sbjct: 241 AELKVYKDAPHGFAVTH 257
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 48.6 bits (116), Expect = 1e-06
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMP--------IPAE 87
R +YLVG + G +A +A PD+ ++L PA + + L+ IP
Sbjct: 119 RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDR 178
Query: 88 LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQST 125
L +TL YL +++ + T
Sbjct: 179 LPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGT 216
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase
BPO-A2 and matrix...; protein design, bionanotechnology;
3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Length = 456
Score = 49.0 bits (117), Expect = 2e-06
Identities = 32/188 (17%), Positives = 52/188 (27%), Gaps = 17/188 (9%)
Query: 36 RPVYLVGESLGACL-ALAVAARNPDMDLVLILANPAT-SFRKSLLQTIMPIPAELMSGQM 93
+ LVG S+G A V++ + K+ P E G
Sbjct: 91 QDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDG-- 148
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQER-SQDFVAMSSYLPVLANILPKETL 152
+++ + D L + R S++ V S N
Sbjct: 149 ------IVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNS------WNTAASGGF 196
Query: 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
+ A + + LIL D+ LP E +ALP+ + G
Sbjct: 197 FAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGA 256
Query: 213 GHFLFLED 220
H L
Sbjct: 257 PHGLLWTH 264
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase
fold, hydrolase; 1.20A {Bacillus SP}
Length = 270
Score = 47.5 bits (113), Expect = 3e-06
Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 45/196 (22%)
Query: 32 RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91
+ + +++ G S+G L L +A +PD+ ++ N A + IPA
Sbjct: 105 KQRCQTIFVTGLSMGGTLTLYLAEHHPDIC-GIVPINAA-----------VDIPAIAAGM 152
Query: 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
L L + D ++ +A P +
Sbjct: 153 TGGGELPRYLDSIGSD------------------LKNPDVKELAYEKT--------PTAS 186
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL--PNCQTRRF 209
L L+L + A A+LD + LI S D ++P D + + + + R
Sbjct: 187 L---LQLAR-LMAQTKAKLDRIVCPALIFVSDEDHVVPP-GNADIIFQGISSTEKEIVRL 241
Query: 210 GGGGHFLFLEDGVDLV 225
H L+ ++
Sbjct: 242 RNSYHVATLDYDQPMI 257
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT
peroxidase, oxidoreductase; 1.74A {Bacillus anthracis
str}
Length = 281
Score = 47.0 bits (112), Expect = 5e-06
Identities = 33/201 (16%), Positives = 57/201 (28%), Gaps = 45/201 (22%)
Query: 36 RPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
+ V LVG S+G + D ++ A L ++
Sbjct: 94 QNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVP---PYLYKS-------------- 136
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQ---DFVAMSSYLPVLANILPKET 151
P D+ ++ F I +R +F +++ +
Sbjct: 137 ----------EDHPEGALDDATIET-FKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESF 185
Query: 152 LLWKLELLKSASAYANA-------------RLDAVKAQTLILCSGRDQLLPSEEEGDRLC 198
L+ ++ AS L+ TLI+ D +P E G
Sbjct: 186 RLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTH 245
Query: 199 RALPNCQTRRFGGGGHFLFLE 219
A+PN + GG H L
Sbjct: 246 EAIPNSKVALIKGGPHGLNAT 266
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A
{Streptomyces aureofaciens} SCOP: c.69.1.12
Length = 274
Score = 47.0 bits (112), Expect = 5e-06
Identities = 26/198 (13%), Positives = 55/198 (27%), Gaps = 38/198 (19%)
Query: 36 RPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
R V LV S+G R +L + M + G
Sbjct: 86 RDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPV--------MIKSDKNPDGVPD 137
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTI-QERSQDFVAMSSYLPVLANILPKETLL 153
L + + + + +G F + + +Q
Sbjct: 138 EVFDALKNGVLTERSQF-WKDTAEGFFSANRPGNKVTQGNKDA----------------F 180
Query: 154 WKLELLKSASAYANA-----------RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP 202
W + + ++ L TL++ DQ++P + G + + +P
Sbjct: 181 WYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIP 240
Query: 203 NCQTRRFGGGGHFLFLED 220
N + + + G H + +
Sbjct: 241 NAELKVYEGSSHGIAMVP 258
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A
{Escherichia coli} PDB: 3bf8_A
Length = 255
Score = 46.3 bits (110), Expect = 7e-06
Identities = 30/191 (15%), Positives = 56/191 (29%), Gaps = 41/191 (21%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96
+G S+G +A+ A PD L+ + I P+ +
Sbjct: 82 KATFIGHSMGGKAVMALTALAPDRIDKLVAID------------IAPVDYHVRRHDEIF- 128
Query: 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPV------LANILPKE 150
A++++ + S Q R Q M +L L
Sbjct: 129 --------------AAINAVSE-----SDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDG 169
Query: 151 TLLWKLELLKSASAY--ANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR 208
+ + +L + ++ A L + G + E+ D L P +
Sbjct: 170 EWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVS-EQYRDDLLAQFPQARAHV 228
Query: 209 FGGGGHFLFLE 219
G GH++ E
Sbjct: 229 IAGAGHWVHAE 239
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged
active site, prolyl peptidase; 1.80A {Thermoplasma
acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A
1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A*
1xqx_A* 1xqy_A 1xqv_A
Length = 293
Score = 46.4 bits (111), Expect = 7e-06
Identities = 39/205 (19%), Positives = 66/205 (32%), Gaps = 48/205 (23%)
Query: 38 VYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLTL 97
V+L+G S G LALA A + D LI++ +S LT+
Sbjct: 99 VFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVP--------------------LTV 138
Query: 98 SYLLSLLTGDPLKM--AMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
+ L+ P K A+ ++ Q+ V + +L + +L
Sbjct: 139 KEMNRLIDELPAKYRDAIKKYGSSGSYEN---PEYQEAVNYFYHQHLLRSEDWPPEVLKS 195
Query: 156 LELLKSASAYANA-------------------RLDAVKAQTLILCSGR-DQLLPSEEEGD 195
LE + + Y ++ A+K TLI G D++ P
Sbjct: 196 LEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITV-GEYDEVTP--NVAR 252
Query: 196 RLCRALPNCQTRRFGGGGHFLFLED 220
+ + + F H ED
Sbjct: 253 VIHEKIAGSELHVFRDCSHLTMWED 277
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain,
catalytic triad (A His272, Glu130), mutant, I135F,
haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A
3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A
Length = 299
Score = 46.1 bits (110), Expect = 1e-05
Identities = 45/202 (22%), Positives = 68/202 (33%), Gaps = 29/202 (14%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPA-ELMSGQ 92
V LV G+ L A RNP+ V + I P P +
Sbjct: 98 EEVVLVIHDWGSALGFHWAKRNPER--VKGIACME-----------FIRPFPTWDEWPEF 144
Query: 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETL 152
T + G L + ++ ++G + ++ ++ M Y + +E L
Sbjct: 145 ARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEV--EMDHYREPFLKPVDREPL 202
Query: 153 LWKLELLKSASAYAN---------ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN 203
L A AN L L+ L+P E RL +LPN
Sbjct: 203 WRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIP-PAEAARLAESLPN 261
Query: 204 CQTRRFGGGGHFLFLEDGVDLV 225
C+T G G H+L ED DL+
Sbjct: 262 CKTVDIGPGLHYL-QEDNPDLI 282
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 46.4 bits (109), Expect = 2e-05
Identities = 48/300 (16%), Positives = 89/300 (29%), Gaps = 79/300 (26%)
Query: 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD------MDLVLILANPAT 71
L +I +IR N ++ + L + ++ P L +
Sbjct: 329 RLSIIAESIRDGLATWDNWK-HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV------- 380
Query: 72 SFRKSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQ 131
F S IP L LSL+ D +K + +V L S ++++ +
Sbjct: 381 -FPPSA-----HIPTIL------------LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 132 DFVAMSSYLPVLANILPKETLLWKLELLKSAS--AYANARLDAVKAQTLILCSGRDQLLP 189
+ + +P + LEL + + V + D L+P
Sbjct: 423 ES---TISIPSIY-----------LELKVKLENEYALHRSI--VDHYNIPKTFDSDDLIP 466
Query: 190 SEEEG---DRLCRALPNC-QTRRFGGGGH-FL---FLEDGVDLVTTIKGAGYYRRGRIVD 241
+ + L N R FL FLE + +T A G I++
Sbjct: 467 PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA----SGSILN 522
Query: 242 YVSDFIPPTTIEVNKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHM 301
+ K Y+ Y D +++ + L +P L+ +
Sbjct: 523 TLQQL---------KFYKPYICDNDPKYERLVNAI--------LDFLPKIEENLICSKYT 565
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A
{Streptomyces lividans} SCOP: c.69.1.12
Length = 275
Score = 44.2 bits (105), Expect = 4e-05
Identities = 30/201 (14%), Positives = 56/201 (27%), Gaps = 43/201 (21%)
Query: 36 RPVYLVGESL-GACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQ 92
R +G S G +A VA P V +L + +P E+
Sbjct: 88 RGAVHIGHSTGGGEVARYVARAEPG--RVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDE- 144
Query: 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTI--QERSQDFVAMSSYLPVLANILPKE 150
+ L + + +D + G F SQ +
Sbjct: 145 -------FRAALAANRAQFYID-VPSGPFYGFNREGATVSQGLIDH-------------- 182
Query: 151 TLLWKLELLKSASAYAN-----------ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCR 199
W ++ +A+A+ L + L+ DQ++P + +
Sbjct: 183 --WWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAE 240
Query: 200 ALPNCQTRRFGGGGHFLFLED 220
L N + + G H +
Sbjct: 241 LLANATLKSYEGLPHGMLSTH 261
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A
{Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Length = 316
Score = 41.9 bits (99), Expect = 2e-04
Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 18/202 (8%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILAN-PATSFRKSLLQTIMPIPAELMSGQ 92
YLV + G LA +AAR PD V L + +
Sbjct: 95 TSAYLVAQDWGTALAFHLAARRPDF--VRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEA 152
Query: 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLAN------- 145
+ G+ + + ++ V+ + +++ + M+ Y
Sbjct: 153 ARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDE--EMAPYRTPFPTPESRRPV 210
Query: 146 -ILPKET-LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN 203
P+E + + + A A+A L A L+ L+ E +R +L
Sbjct: 211 LAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVS-PEFAERFAASLTR 269
Query: 204 CQTRRFGGGGHFLFLEDGVDLV 225
C R G G H+L ED D +
Sbjct: 270 CALIRLGAGLHYL-QEDHADAI 290
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A
{Mycobacterium tuberculosis}
Length = 330
Score = 42.1 bits (99), Expect = 2e-04
Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 43/199 (21%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
++VG SLG A+ +AA P DLV L+L + P + +
Sbjct: 146 GAEFVVGMSLGGLTAIRLAAMAP--DLVGELVLVDVT------------PSALQRHAELT 191
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLP-------VLANI 146
+A+ + + Q +A + + V N
Sbjct: 192 AEQRG-----------TVALMHGEREF---PSFQAMLDLTIAAAPHRDVKSLRRGVFHNS 237
Query: 147 LPKE--TLLWKLELLKSASAYAN--ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP 202
+ +W+ + +++ +A +DA+ A ++ G + ++++ L R
Sbjct: 238 RRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFV-TDQDTAELHRRAT 296
Query: 203 NCQT-RRFGGGGHFLFLED 220
+ + GH + +
Sbjct: 297 HFRGVHIVEKSGHSVQSDQ 315
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural
genomics, protein structure initiative, PSI-2; HET: MSE;
1.50A {Novosphingobium aromaticivorans}
Length = 285
Score = 41.2 bits (97), Expect = 4e-04
Identities = 26/196 (13%), Positives = 59/196 (30%), Gaps = 32/196 (16%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+G SLG L + +AA NP + +L + L+ I
Sbjct: 97 ERFVAIGTSLGGLLTMLLAAANPA--RIAAAVLNDVGPEVSPEGLERI------------ 142
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
Y+ + A ++ + + +Q + + ++ +
Sbjct: 143 ---RGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSS--GRIAFD 197
Query: 154 WKLELLKSASAYANA--------RLDAVKAQ-TLILCSGRDQLLPSEEEGDRLCRALPNC 204
+ +++ + A A DA+ + L+L +L + + P
Sbjct: 198 YDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILS--AQTAAKMASRPGV 255
Query: 205 QTRRFGGGGHFLFLED 220
+ GH L++
Sbjct: 256 ELVTLPRIGHAPTLDE 271
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure
initiative, MI center for structural genomics, MCSG;
HET: MES; 2.25A {Pseudomonas aeruginosa}
Length = 266
Score = 40.7 bits (96), Expect = 4e-04
Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 31/188 (16%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
R + +G SLG + +A P L+LAN + G
Sbjct: 93 RRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWL-----------------GPAAQ 135
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERS---QDFVAMSSYLPVLANILPKETL 152
+ ++L + + + F + ++ + F AM ++A + L
Sbjct: 136 WDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAM-----LMAT--NRHGL 188
Query: 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
+ A+L ++ TL++ D + + G+ + ++ +
Sbjct: 189 AGSFAAV--RDTDLRAQLARIERPTLVIAGAYDTVTAA-SHGELIAASIAGARLVTL-PA 244
Query: 213 GHFLFLED 220
H +E
Sbjct: 245 VHLSNVEF 252
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A
{Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A
1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A
2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Length = 310
Score = 40.1 bits (94), Expect = 8e-04
Identities = 29/202 (14%), Positives = 57/202 (28%), Gaps = 24/202 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
R + LV + G L L + +P LI+ N P+ S +T
Sbjct: 116 RNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTD--------PVTQPAFSAFVTQ 167
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYL--------PVLANIL 147
+ + F++ ++ S+Y
Sbjct: 168 PADGFTAWKYDLVTPSDLR---LDQFMKRWAPTLTEA--EASAYAAPFPDTSYQAGVRKF 222
Query: 148 PKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QT 206
PK + ++ + + QT + +D+LL + + + C +
Sbjct: 223 PKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVM-YPMKALINGCPEP 281
Query: 207 RRFGGGGHFLFLEDGVDLVTTI 228
GHF+ E G +
Sbjct: 282 LEIADAGHFV-QEFGEQVAREA 302
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 39.8 bits (93), Expect = 0.001
Identities = 27/178 (15%), Positives = 49/178 (27%), Gaps = 26/178 (14%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96
P++ G S GA L+L +A ++ + + + T
Sbjct: 97 PIFTFGRSSGAYLSLLIARDRDIDGVIDFYG-----------------YSRINTEPFKTT 139
Query: 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156
SY + M +Q I +R +V + I + K
Sbjct: 140 NSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKY 199
Query: 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGH 214
+ + L I D +P EE + + +P+ R H
Sbjct: 200 ----NIAPDELKTL----PPVFIAHCNGDYDVP-VEESEHIMNHVPHSTFERVNKNEH 248
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase,
alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter
nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Length = 276
Score = 39.4 bits (92), Expect = 0.001
Identities = 20/188 (10%), Positives = 45/188 (23%), Gaps = 26/188 (13%)
Query: 36 RPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
V S G + + + + P+ I+ + +M P + +T
Sbjct: 93 ETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMD-----------WLMWAPKPDFAKSLT 141
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154
L L D + G + ++ +
Sbjct: 142 LLKDPERWREGTHGL---FDVWLDGHDEKRVRHHLLEEMADYGYDCWGRS--------GR 190
Query: 155 KLELLKSASAYANARLDAVKAQ--TLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
+E + + + + S + E+ P + GG
Sbjct: 191 VIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEY-EKINSDFAEQHPWFSYAKLGGP 249
Query: 213 GHFLFLED 220
HF ++
Sbjct: 250 THFPAIDV 257
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A,
alternative splicing, hydrolase, phosphoprotein, serine
esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Length = 316
Score = 39.8 bits (93), Expect = 0.001
Identities = 29/194 (14%), Positives = 62/194 (31%), Gaps = 27/194 (13%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV-LILANPATSFRKSLLQTIMPIPAELMSGQMT 94
P+ L+G S+G +A+ A+ N L+ L + + L ++ +
Sbjct: 110 PPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKS 169
Query: 95 LT--LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETL 152
L + + + L+ A S+V + + + +
Sbjct: 170 LENAIEWSVKSGQIRNLESARVSMVGQV--------KQCEGITSPEGSK------KDHPY 215
Query: 153 LWKLELLKSASAYAN------ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQT 206
W++EL K+ + + L+L +G D+L G + Q
Sbjct: 216 TWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIG----QMQGKFQM 271
Query: 207 RRFGGGGHFLFLED 220
+ GH + +
Sbjct: 272 QVLPQCGHAVHEDA 285
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine
esterase; 2.20A {Homo sapiens}
Length = 342
Score = 39.7 bits (93), Expect = 0.001
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 24 RTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMP 83
+++ + PV+L+G S+G +A+ AA P ++L +P T
Sbjct: 123 DSMQKDY---PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKV 179
Query: 84 IPAELMSGQM-TLTLSYL-LSLLTGDP 108
+ A++++ + L+L + S+L+ +
Sbjct: 180 LAAKVLNLVLPNLSLGPIDSSVLSRNK 206
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold,
2-arachidonyl-glycerol, M associated, hydrolase,
hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A
{Homo sapiens} PDB: 3jw8_A 3jwe_A*
Length = 303
Score = 39.6 bits (93), Expect = 0.001
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 24 RTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMP 83
+++ + PV+L+G S+G +A+ AA P ++L +P T
Sbjct: 105 DSMQKDY---PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKV 161
Query: 84 IPAELMS 90
+ A++++
Sbjct: 162 LAAKVLN 168
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane
dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase;
0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB:
1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A
1iz8_A* 1k5p_A 1k63_A 1k6e_A
Length = 302
Score = 39.0 bits (91), Expect = 0.002
Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 11/186 (5%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96
V LV G+ L A R+ + + + P +
Sbjct: 101 RVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIE---WADFPEQDRDLFQAFRSQ 157
Query: 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156
L L ++ + ++ ++ + + F+A + P++ +
Sbjct: 158 AGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS-WPRQIPIAGT 216
Query: 157 --ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGH 214
+++ A YA L L + + L CR PN G H
Sbjct: 217 PADVVAIARDYA-GWLSESPIPKLFINAEPGALTTGRMR--DFCRTWPNQTEITV-AGAH 272
Query: 215 FLFLED 220
F+ ED
Sbjct: 273 FI-QED 277
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Length = 251
Score = 38.5 bits (90), Expect = 0.002
Identities = 21/98 (21%), Positives = 31/98 (31%), Gaps = 9/98 (9%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR------KSLLQTIMP--IPAEL 88
+Y+ G S G + AA D+ LI +PA + L P IP EL
Sbjct: 101 DIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDEL 160
Query: 89 MS-GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQST 125
+ L +Y+ T L +
Sbjct: 161 DAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGD 198
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR
family, developmental protei differentiation,
neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus
musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Length = 286
Score = 38.2 bits (88), Expect = 0.003
Identities = 32/198 (16%), Positives = 54/198 (27%), Gaps = 31/198 (15%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
+ VG GA + A +PD L+L N + K + L S
Sbjct: 111 STIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPN-AKGWMDWAAHKLTGLTSS---- 165
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
D I+ LF Q + S+ + Y ++ + E +
Sbjct: 166 ----------------IPDMILGHLFSQEELSGNSE---LIQKYRGIIQHAPNLENIELY 206
Query: 156 LELLKSASAYANAR--LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTR--RFGG 211
+ R +K +++ + P E+ L QT +
Sbjct: 207 WNSYNNRRDLNFERGGETTLKCPVMLVVGDQA---PHEDAVVECNSKLDPTQTSFLKMAD 263
Query: 212 GGHFLFLEDGVDLVTTIK 229
G L L K
Sbjct: 264 SGGQPQLTQPGKLTEAFK 281
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold
seven-stranded beta-sandwich, structural genomics,
structural genomics consortium, SGC; 2.40A {Homo
sapiens}
Length = 422
Score = 37.9 bits (87), Expect = 0.006
Identities = 26/200 (13%), Positives = 55/200 (27%), Gaps = 59/200 (29%)
Query: 26 IRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL---QTIM 82
+ + L+G SLGA + L++A+ ++ + + S ++ +I
Sbjct: 216 MLQHPQVKGPG-IGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAINYKHSSIP 274
Query: 83 PIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPV 142
P+ +L ++ GL I+ S +P+
Sbjct: 275 PLGYDLRRIKVAF----------------------SGLVDIVDIRNALVGGYKNPSMIPI 312
Query: 143 LANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL- 201
+ + L++ D SE + L
Sbjct: 313 ----------------------------EKAQGPILLIVGQDDHNWRSELYAQTVSERLQ 344
Query: 202 ----PNCQTRRFGGGGHFLF 217
Q + G GH++
Sbjct: 345 AHGKEKPQIICYPGTGHYIE 364
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta
hydrolase, alternative splicing, hydrolase,
mitochondrion, polymorphism, serine esterase; 2.10A
{Homo sapiens}
Length = 446
Score = 37.5 bits (86), Expect = 0.007
Identities = 27/201 (13%), Positives = 55/201 (27%), Gaps = 59/201 (29%)
Query: 26 IRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL---QTIM 82
+ S V L+G S G L L++A+ + +++ + +L +T+
Sbjct: 232 LLSHPEVKGPG-VGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLRYKGETLP 290
Query: 83 PIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPV 142
P+ ++T G + + S++PV
Sbjct: 291 PVGVNRNRIKVT----------------------KDGYADIVDVLNSPLEGPDQKSFIPV 328
Query: 143 LANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL- 201
+ ++ L L D SE + C+ L
Sbjct: 329 ----------------------------ERAESTFLFLVGQDDHNWKSEFYANEACKRLQ 360
Query: 202 ----PNCQTRRFGGGGHFLFL 218
Q + GH++
Sbjct: 361 AHGRRKPQIICYPETGHYIEP 381
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism;
1.90A {Burkholderia xenovorans}
Length = 266
Score = 36.8 bits (86), Expect = 0.009
Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 32/188 (17%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
G S+G +A+AAR+ D + L N T+ R E+ +
Sbjct: 92 ARANFCGLSMGGLTGVALAARHADRIERVALCN--TAARIG--------SPEVWVPRAVK 141
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERS---QDFVAMSSYLPVLANILPKETL 152
T +A D+++ F ++ + + KE
Sbjct: 142 -------ARTEGMHALA-DAVLPRWFTADYMEREPVVLAMIRDV-----FVHT--DKEGY 186
Query: 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
E + +A +K L++ D +G L +A+ +
Sbjct: 187 ASNCEAIDAADLR--PEAPGIKVPALVISGTHDLAATP-AQGRELAQAIAGARYVEL-DA 242
Query: 213 GHFLFLED 220
H +E
Sbjct: 243 SHISNIER 250
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural
genomics, unknown function; 2.20A {Thermus thermophilus}
Length = 286
Score = 37.0 bits (86), Expect = 0.009
Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 18/181 (9%)
Query: 40 LVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLTLSY 99
L+ GA +AL V R P + ++LA + +
Sbjct: 99 LLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPW-----LAARLAEAAGLAPLPDPEEN 153
Query: 100 LLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159
L L + K D ++ E + + L LW+L+
Sbjct: 154 LKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNG--LWRLDYT 211
Query: 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLE 219
L + +L RD + + + R GH+L+++
Sbjct: 212 --------PYLTPERRPLYVLVGERDGTSY--PYAEEVA-SRLRAPIRVLPEAGHYLWID 260
Query: 220 D 220
Sbjct: 261 A 261
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase,
decarboxylase, sulfate elimination, terminal alkene
production; 1.68A {Lyngbya majuscula 19L}
Length = 286
Score = 36.6 bits (85), Expect = 0.010
Identities = 34/193 (17%), Positives = 62/193 (32%), Gaps = 20/193 (10%)
Query: 36 RPVYLVGESLGACLALAVAARNPDM--DLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93
+P+ LVG S+GA LA A+A+ P +L+L+ E Q+
Sbjct: 95 QPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEES----------KKESAVNQL 144
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANIL----PK 149
T L YL S + + ++ E +A P +
Sbjct: 145 TTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAI 204
Query: 150 ETLLWKLELLKSASAYANAR--LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTR 207
L L + L +++ T ++ +L E+ + + +
Sbjct: 205 IRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLN-RPEDLQQQKMTMTQAKRV 263
Query: 208 RFGGGGHFLFLED 220
GGH L ++
Sbjct: 264 FL-SGGHNLHIDA 275
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme,
megasynthase, fatty acid synthesis; 3.2A {Sus scrofa}
PDB: 2vz9_A*
Length = 2512
Score = 36.4 bits (84), Expect = 0.019
Identities = 18/132 (13%), Positives = 42/132 (31%), Gaps = 14/132 (10%)
Query: 35 NRPVYLVGESLGACLALAVAAR------NPDMDLVLILANPATSFRKSLLQTIMPIPAEL 88
P + G S GAC+A + ++ + L L + + +F + Q++
Sbjct: 2300 EGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGSHTFVLAYTQSVRAKMTPG 2359
Query: 89 MSGQM-TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANIL 147
+ + + + T M +++ L ++ R V + L
Sbjct: 2360 CEAEAEAKAMYFFVQQFT----DMEQGKVLEALIPLQGLEARVAATV---DLITQSHAGL 2412
Query: 148 PKETLLWKLELL 159
+ L +
Sbjct: 2413 DRHALSFAARSF 2424
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1
interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Length = 210
Score = 34.9 bits (80), Expect = 0.027
Identities = 5/35 (14%), Positives = 9/35 (25%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70
P ++ SL +L + P
Sbjct: 103 GPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPI 137
Score = 30.3 bits (68), Expect = 0.83
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 176 QTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
LI+ +D + + E + LPN + G GH +L+
Sbjct: 153 PALIVYGDQDPMGQTSFE---HLKQLPNHRVLIMKGAGHPCYLDK 194
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 34.4 bits (79), Expect = 0.050
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 5/77 (6%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
+ +VG S G L+ + P L L +PA Q + + A+ +
Sbjct: 101 HSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSLNAD---PDLMD 155
Query: 96 TLSYLLSLLTGDPLKMA 112
L+ L
Sbjct: 156 YRRRALAPGDNLALAAC 172
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase,
luciferase, oxidoreductase; 1.40A {Renilla reniformis}
PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Length = 318
Score = 34.7 bits (80), Expect = 0.050
Identities = 29/195 (14%), Positives = 50/195 (25%), Gaps = 26/195 (13%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
+ + VG GA LA A + D ++ + P E ++ +
Sbjct: 111 KKIIFVGHDWGAALAFHYAYEHQDRIKAIVHME--SVVDVIESWDEWPDIEEDIALIKSE 168
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLAN---------I 146
++ + I++ L + ++YL
Sbjct: 169 EGEKMVLENNFFVETVLPSKIMRKL---------EPE--EFAAYLEPFKEKGEVRRPTLS 217
Query: 147 LPKETLLWKLELLKSASAYAN-ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQ 205
P+E L K N L D + PN +
Sbjct: 218 WPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPGFF-SNAIVEGAKKFPNTE 276
Query: 206 TRRFGGGGHFLFLED 220
+ G HFL ED
Sbjct: 277 FVKV-KGLHFL-QED 289
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein,
BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics,
PSI-2; 1.72A {Homo sapiens}
Length = 194
Score = 33.9 bits (77), Expect = 0.052
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTI 228
++ A + S D LP +E + L + +F GHF + +L+T +
Sbjct: 122 KIKANCPYIVQFGSTDDPFLPWKE-QQEVADRL-ETKLHKFTDCGHF-QNTEFHELITVV 178
Query: 229 K 229
K
Sbjct: 179 K 179
Score = 30.5 bits (68), Expect = 0.78
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 35 NRPVYLVGESLGACLALAVAARNP 58
+ ++G S GA A+ A +
Sbjct: 66 DEKTIIIGHSSGAIAAMRYAETHR 89
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold;
1.90A {Plesiocystis pacifica}
Length = 297
Score = 34.4 bits (79), Expect = 0.054
Identities = 32/204 (15%), Positives = 62/204 (30%), Gaps = 38/204 (18%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILAN----------PATSFRKSLLQTIMPIP 85
V LV + G L L + P + LI+ N + + +
Sbjct: 115 ERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLD 174
Query: 86 AELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLAN 145
+ + ++ D A D+ F + + F A+ P +
Sbjct: 175 VGKLMQRAIPGIT--------DAEVAAYDAP----FPGPEFKAGVRRFPAIVPITPDMEG 222
Query: 146 ILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC- 204
E+ + A ++ + + T + +D +L E L +A+ C
Sbjct: 223 ----------AEIGRQAMSFWSTQWSG---PTFMAVGAQDPVLGPEV-MGMLRQAIRGCP 268
Query: 205 QTRRFGGGGHFLFLEDGVDLVTTI 228
+ GGHF+ E G +
Sbjct: 269 EPMIVEAGGHFV-QEHGEPIARAA 291
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the
alpha/beta superfamily, structural genomics; HET: MSE
TLA P6G; 1.35A {Xanthomonas campestris PV}
Length = 176
Score = 33.4 bits (76), Expect = 0.071
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 32 RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91
+ PV L G SLG+ +A V+ + P L L+ P T +P ++
Sbjct: 70 ATEKGPVVLAGSSLGSYIAAQVSLQVPTRALFLM--VPPTKMGPLPALDAAAVPISIVHA 127
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 33.5 bits (76), Expect = 0.10
Identities = 26/164 (15%), Positives = 47/164 (28%), Gaps = 23/164 (14%)
Query: 89 MSGQMTLTL-SYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANIL 147
Q+ L + + + IVK +FL I + + Y
Sbjct: 127 FIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRLAF 186
Query: 148 PKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----N 203
P +++ E Y L ++ S D+LL + + L L +
Sbjct: 187 PDGIQMYE-EEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTL-RQTNCLISCLQDYQLS 244
Query: 204 CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFI 247
+ G H Y+ G++ Y+ D I
Sbjct: 245 FKLYLDDLGLHN----------------DVYKNGKVAKYIFDNI 272
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural
genomics, joint CEN structural genomics, JCSG; HET: PG4
UNL; 1.85A {Sulfolobus solfataricus P2}
Length = 354
Score = 33.8 bits (76), Expect = 0.11
Identities = 32/201 (15%), Positives = 56/201 (27%), Gaps = 29/201 (14%)
Query: 32 RSSNRPVYLVGESLGACLALAVAARNPDMD---LVLILANPATSFRKSLLQTI------- 81
S +YL GES G AL ++ D L+L+ P + T
Sbjct: 140 DSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEE 199
Query: 82 --------MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDF 133
+P + + L+ K D ++ L++ + +
Sbjct: 200 MEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPY 259
Query: 134 VAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEE 193
P+LA W L S + + T+ S R + + +
Sbjct: 260 SKKEDMFPILA----SFDPYWPYRL--SLERDLKFDYEGILVPTIAFVSERFGIQIFDSK 313
Query: 194 GDRLCRALPNCQTRRFGGGGH 214
N + G GH
Sbjct: 314 -----ILPSNSEIILLKGYGH 329
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase;
2.20A {Unidentified}
Length = 309
Score = 33.1 bits (76), Expect = 0.14
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 177 TLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
L+ + L P + D L +PN + R G G HFL ED
Sbjct: 239 KLLFHAEPGALAP-KPVVDYLSENVPNLEVRFVGAGTHFL-QED 280
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei
structural genomics consortium, TBSGC, hydrolase; 1.19A
{Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Length = 297
Score = 32.0 bits (73), Expect = 0.36
Identities = 29/196 (14%), Positives = 54/196 (27%), Gaps = 27/196 (13%)
Query: 35 NRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
V LV G+ L A ++ D + I+
Sbjct: 98 GDHVVLVLHDWGSALGFDWANQHRDRVQGIAFME-----------AIVTPMTWADWPPAV 146
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLAN--ILPKETL 152
+ G+P+ + + V+ + + +++ S + M+ Y N + TL
Sbjct: 147 RGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDE--EMNHYRRPFVNGGEDRRPTL 204
Query: 153 LWKLELLKSASAYANARLDAVKAQ--------TLILCSGRDQLLPSEEEGDRLCRALPNC 204
W L L L + + ++ R+ PN
Sbjct: 205 SWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGRIR--DYVRSWPNQ 262
Query: 205 QTRRFGGGGHFLFLED 220
G HF+ ED
Sbjct: 263 TEITV-PGVHFV-QED 276
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural
genom consortium, NESG, alpha-beta protein, rossmann
fold, HY; 2.10A {Yersinia enterocolitica subsp}
Length = 202
Score = 31.2 bits (70), Expect = 0.42
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 10/136 (7%)
Query: 6 IFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLI 65
+ Q+ + +++E + + + + + +VG SLG A ++ R + +
Sbjct: 36 MQIPQLPPYPAEAAEMLESIVMDK----AGQSIGIVGSSLGGYFATWLSQR---FSIPAV 88
Query: 66 LANPATSFRKSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQST 125
+ NPA + L + + L ++ L K+ ++ LQ T
Sbjct: 89 VVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQIEKLESPDLL--WLLQQT 146
Query: 126 IQERSQDFVAMSSYLP 141
E D+ +Y
Sbjct: 147 GDEVL-DYRQAVAYYT 161
>1r3d_A Conserved hypothetical protein VC1974; structural genomics,
hydrolase, NYSGXRC, NEW YORK SGX research center for
structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP:
c.69.1.35
Length = 264
Score = 31.5 bits (72), Expect = 0.43
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDL---VLILAN 68
+F +++IE+T+++ S PV LVG SLG L + A+ L I+
Sbjct: 62 CDNFAEAVEMIEQTVQAHVT--SEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEG 119
Query: 69 PA 70
Sbjct: 120 GH 121
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis,
hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A
{Homo sapiens} PDB: 1xkt_A
Length = 283
Score = 31.4 bits (71), Expect = 0.44
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 21/142 (14%)
Query: 37 PVYLVGESLGACLALAVAAR--------NPDMDLVLILANPATSFRKSLLQTIMPIPAEL 88
P + G S GAC+A + ++ L L +P +L A+L
Sbjct: 84 PYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT-----YVLAYTGSYRAKL 138
Query: 89 MSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILP 148
G + + M + +++ L ++ER V + + L
Sbjct: 139 TPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDL---IIKSHQGLD 195
Query: 149 KETLLWKLELLKSASAYANARL 170
++ L + S Y R
Sbjct: 196 RQELSFAAR-----SFYYKLRA 212
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid
synthase, drug complex, tetrahydrolipstatin,
transferase; HET: DH9; 2.30A {Homo sapiens}
Length = 316
Score = 31.0 bits (70), Expect = 0.62
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 21/142 (14%)
Query: 37 PVYLVGESLGACLALAVAAR--------NPDMDLVLILANPATSFRKSLLQTIMPIPAEL 88
P + G S GAC+A + ++ L L +P +L A+L
Sbjct: 106 PYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT-----YVLAYTQSYRAKL 160
Query: 89 MSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILP 148
G + + M + +++ L ++ER V + + L
Sbjct: 161 TPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDL---IIKSHQGLD 217
Query: 149 KETLLWKLELLKSASAYANARL 170
++ L + S Y R
Sbjct: 218 RQELSFAAR-----SFYYKLRA 234
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein,
alpha/beta-hydrolases fold, structur genomics; HET: MSE;
1.66A {Pectobacterium atrosepticum SCRI1043}
Length = 191
Score = 30.7 bits (69), Expect = 0.64
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 35 NRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIP 85
+PV L+G S GA A V + + ++L PA R + I P
Sbjct: 73 TQPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEIDDRIQASP 123
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide
synthase, thioesterase, 6-DEB, TE, DEBS, alpha,
beta-hydrolase; 2.80A {Saccharopolyspora erythraea}
SCOP: c.69.1.22 PDB: 1mo2_A
Length = 300
Score = 31.0 bits (70), Expect = 0.69
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 36 RPVYLVGESLGACLALAVAAR 56
+P + G S GA +A A+A
Sbjct: 134 KPFVVAGHSAGALMAYALATE 154
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid
indole alkaloids, PNAE, hydrolase, serine esterase; HET:
CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Length = 264
Score = 30.7 bits (69), Expect = 0.79
Identities = 23/200 (11%), Positives = 47/200 (23%), Gaps = 17/200 (8%)
Query: 34 SNRPVYLVGESLGACLALAVAARNPDM--DLVLILANPATSFRKSLLQTIMPIPAELMSG 91
+ V L+G S G P+ V + A
Sbjct: 77 PDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADM 136
Query: 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
+ S + + + Q +D +
Sbjct: 137 MLDSQFSTYGNPENPGMSMILGPQFMALKMFQ---NCSVEDLELAKMLTRPGS------- 186
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
+ L A ++ R +VK I C+ D+ P E + ++ + +
Sbjct: 187 --LFFQDLAKAKKFSTERYGSVKR-AYIFCN-EDKSFPVEFQ-KWFVESVGADKVKEIKE 241
Query: 212 GGHFLFLEDGVDLVTTIKGA 231
H L ++ +
Sbjct: 242 ADHMGMLSQPREVCKCLLDI 261
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta
hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces
venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A
1mnq_A
Length = 319
Score = 30.7 bits (69), Expect = 0.83
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 36 RPVYLVGESLGACLALAVAAR 56
PV L+G + GA LA +A R
Sbjct: 161 APVVLLGHAGGALLAHELAFR 181
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase;
alpha/beta hydrolase, META-cleavage pathway; 2.1A
{Arthrobacter nicotinovorans} SCOP: c.69.1.41
Length = 386
Score = 30.3 bits (68), Expect = 1.2
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIM 82
+ ++G SLG AL AA P + I + L+T +
Sbjct: 223 DAIGVLGRSLGGNYALKSAACEPRLAAC-ISWGGFSDLDYWDLETPL 268
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 30.0 bits (67), Expect = 1.3
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILA--NPATSFRKSLLQTIMPIPAELMSGQM 93
+ + L+ SL A +A V + L+ + N + K+L + +P + + +
Sbjct: 106 QNIGLIAASLSARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDL 165
Query: 94 TLTLSYLLSL-LTGDPLKMAMDSI 116
L S D + D++
Sbjct: 166 DFEGHKLGSEVFVRDCFEHHWDTL 189
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Length = 208
Score = 29.6 bits (66), Expect = 1.4
Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHF 215
A L + + LI+ +D+++P E+ + + + G HF
Sbjct: 144 ASLTQMASPWLIVQGDQDEVVP-FEQVKAFVNQISSPVEFVVMSGASHF 191
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like
hydrolase, structural genomi center for structural
genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm
1728}
Length = 207
Score = 29.8 bits (67), Expect = 1.4
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 36 RPVYLVGESLGACLALAVAARNPDM 60
++G S+G + + + PD+
Sbjct: 100 ARSVIMGASMGGGMVIMTTLQYPDI 124
Score = 29.1 bits (65), Expect = 2.0
Identities = 6/37 (16%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 184 RDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
+D ++P + + G GH +++E
Sbjct: 157 KDHVVP-IALSKEYASIISGSRLEIVEGSGHPVYIEK 192
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase,
polyketide synthase, phosphopantetheine, transferase,
hydrolase; 2.00A {Streptomyces SP}
Length = 319
Score = 29.8 bits (67), Expect = 1.6
Identities = 7/21 (33%), Positives = 8/21 (38%)
Query: 36 RPVYLVGESLGACLALAVAAR 56
L G S G +A VA
Sbjct: 148 GEFALAGHSSGGVVAYEVARE 168
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 29.4 bits (66), Expect = 2.1
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 38 VYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPA 86
V ++G S G L+LA AA P + V + P S K + + A
Sbjct: 202 VGVMGPSQGGGLSLACAALEPRVRKV-VSEYPFLSDYKRVWDLDLAKNA 249
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein,
structural genomics, protein structure initiative, PSI;
HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB:
1y7i_A* 1y7h_A*
Length = 273
Score = 29.5 bits (66), Expect = 2.1
Identities = 30/206 (14%), Positives = 54/206 (26%), Gaps = 31/206 (15%)
Query: 35 NRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
+ V LVG SLG + P + ++ E +
Sbjct: 72 DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENW 131
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154
L +L +PL F+A L + E L
Sbjct: 132 LDTQFLPYGSPEEPLTSMFF---------------GPKFLAH-----KLYQLCSPEDLAL 171
Query: 155 KLELLKSASAYANARLDAVKAQ---------TLILCSGRDQLLPSEEEGDRLCRALPNCQ 205
L++ +S + A I+C+ D+ +P E + + +
Sbjct: 172 ASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCT-EDKGIPEEFQ-RWQIDNIGVTE 229
Query: 206 TRRFGGGGHFLFLEDGVDLVTTIKGA 231
G H L + L ++
Sbjct: 230 AIEIKGADHMAMLCEPQKLCASLLEI 255
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase;
HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A*
2w5x_A* 2iuc_A 2iuc_B
Length = 375
Score = 29.2 bits (66), Expect = 2.5
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 209 FGGGG--HFLFLEDGVDLVTTIKGAGYY 234
F GGG +F +D D++ +KG +
Sbjct: 166 FAGGGLNYFTKRKDKKDVLAILKGNQFT 193
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas
mendocina}
Length = 258
Score = 28.8 bits (64), Expect = 2.9
Identities = 7/59 (11%), Positives = 15/59 (25%), Gaps = 1/59 (1%)
Query: 164 AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLFLEDG 221
+ +A + ++ G D + + R HF + G
Sbjct: 155 GHDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSG 213
>1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A
{Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A
Length = 269
Score = 29.1 bits (65), Expect = 3.0
Identities = 7/42 (16%), Positives = 14/42 (33%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56
+ ++ ++ + V + G SLG AL
Sbjct: 116 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 157
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural
genomics, joint CE structural genomics, JCSG, protein
structure initiative; 1.75A {Mesorhizobium loti} SCOP:
c.69.1.14
Length = 223
Score = 28.7 bits (64), Expect = 3.0
Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 2/76 (2%)
Query: 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77
+ + +G S GA L ++ +P + + L P
Sbjct: 95 FAAFTNEAAKRHGL--NLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHVP 152
Query: 78 LQTIMPIPAELMSGQM 93
+ I +++G
Sbjct: 153 ATDLAGIRTLIIAGAA 168
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088,
agrobacterium tumefaciens STR. C58 structural genomics,
PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP:
c.69.1.14
Length = 251
Score = 28.8 bits (64), Expect = 3.1
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 22 IERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD 59
+ I++ PV +G S GA + V P+
Sbjct: 127 MADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPE 164
>1fep_A FEPA, ferric enterobactin receptor; outer membrane, iron transport,
transport, TONB, signal, membrane protein; 2.40A
{Escherichia coli K12} SCOP: f.4.3.3
Length = 724
Score = 28.8 bits (64), Expect = 3.8
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 211 GGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIE 253
G + L L DG + + +R R + ++PP IE
Sbjct: 78 GPENTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIE 120
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG
BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Length = 279
Score = 28.4 bits (63), Expect = 4.1
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAA----RNPDMDLVLI 65
+ L+ I ++ + + V ++G SLGA + L A R
Sbjct: 117 YNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTY 171
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation;
HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17
PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Length = 261
Score = 28.3 bits (63), Expect = 4.1
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56
+ + +E ++ + + + + + G SLGA +A AA+
Sbjct: 104 WISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS,
non-ribosomal peptide synthetase, type II thioesterase,
antibiotic biosynthesis; NMR {Bacillus subtilis} PDB:
2ron_A
Length = 242
Score = 28.2 bits (63), Expect = 4.3
Identities = 32/197 (16%), Positives = 58/197 (29%), Gaps = 48/197 (24%)
Query: 36 RPVYLVGESLGACLALAVAAR----NPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91
RP L G S+G + +A + V+I A I + +S
Sbjct: 78 RPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQP-----------PHIQRKKVSH 126
Query: 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
+ L G P ++ + V FL S D+ A+ +
Sbjct: 127 LPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSFR----SDYRALEQFEL---------- 172
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
Y A++ + + D+ + EG + + + +F
Sbjct: 173 -------------YDLAQIQ---SPVHVFNGLDDKKCIRDAEGWK--KWAKDITFHQF-D 213
Query: 212 GGHFLFLEDGVDLVTTI 228
GGH L ++ I
Sbjct: 214 GGHMFLLSQTEEVAERI 230
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella
zeae}
Length = 319
Score = 28.4 bits (63), Expect = 5.2
Identities = 8/42 (19%), Positives = 14/42 (33%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56
+ + + + + V VG SLG +A A
Sbjct: 115 WNEISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGAN 156
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase
fold, structural genomics, structural G of pathogenic
protozoa consortium; 2.20A {Trypanosoma brucei}
Length = 335
Score = 28.1 bits (62), Expect = 5.7
Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 6/79 (7%)
Query: 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTI 228
+ +K L++ + Q PS+EE + + R G + D +
Sbjct: 219 SVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGV-----RDHTGCNRVT-VSYFNDTCDEL 272
Query: 229 KGAGYYRRGRIVDYVSDFI 247
+ V + F+
Sbjct: 273 RRVLKAAESEHVAAILQFL 291
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide
synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A
{Bacillus subtilis} SCOP: c.69.1.22
Length = 230
Score = 27.8 bits (62), Expect = 6.3
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 37 PVYLVGESLGACLALAVAAR 56
P+ L G S G LA A +
Sbjct: 72 PLTLFGYSAGCSLAFEAAKK 91
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor;
HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP:
c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A*
3q6j_A*
Length = 523
Score = 28.0 bits (63), Expect = 6.5
Identities = 11/102 (10%), Positives = 29/102 (28%), Gaps = 25/102 (24%)
Query: 211 GGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEVNKVYEEYRWMVDLTSS 270
G ++ ++L + +++D T+E + ++ +
Sbjct: 137 HGIMNFQSKEQLNLEYILNC-----PAKVID-------NHTVEAAG--KVFK-----AKN 177
Query: 271 VMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVP 312
++L+ G L + +E L P
Sbjct: 178 LILAV---GAGPGTLDVPGVNAKGVFDHAT---LVEELDYEP 213
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids
binding, glycosylation, extracellular, hydrolase; HET:
NAG; 1.70A {Yarrowia lipolytica}
Length = 301
Score = 27.7 bits (61), Expect = 6.8
Identities = 8/42 (19%), Positives = 14/42 (33%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56
+ I + S + + + + G SLG AL
Sbjct: 133 YNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGIN 174
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct
initiative, midwest center for structural genomics,
MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP:
c.69.1.14
Length = 226
Score = 27.5 bits (61), Expect = 7.0
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 34 SNRPVYLVGESLGACLALAVAARNPD 59
+ +G S GA +A ++ +
Sbjct: 117 DRNNIVAIGYSNGANIAASLLFHYEN 142
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial
L-fucose metabolism; 1.66A {Escherichia coli} SCOP:
c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P
1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P
1dzw_P 1e49_P 1e4a_P
Length = 215
Score = 27.6 bits (62), Expect = 7.5
Identities = 8/26 (30%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 402 VAAAFGGKI--VPFGVVGEDDLAQVI 425
+AAA G I P+ G +L++ +
Sbjct: 115 IAAAGGNSIPCAPYATFGTRELSEHV 140
>1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A
{Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A*
3tgl_A
Length = 269
Score = 27.6 bits (61), Expect = 7.8
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56
+ + + T+ + + + V + G SLG AL A
Sbjct: 115 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALD 156
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron
aquisition, structural genomics, PSI-2, protein
structure initiative; HET: CIT; 1.80A {Shigella flexneri
2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A*
3c8h_A 3mga_A*
Length = 403
Score = 27.6 bits (61), Expect = 8.2
Identities = 9/43 (20%), Positives = 14/43 (32%), Gaps = 3/43 (6%)
Query: 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDM 60
LL L++ + G+S G AL P+
Sbjct: 261 LLPLVKVIAP---FSDRADRTVVAGQSFGGLSALYAGLHWPER 300
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide
synthesis, alpha/beta- hydrolases, catalytic triade,
hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Length = 244
Score = 27.5 bits (61), Expect = 8.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 37 PVYLVGESLGACLALAVAAR 56
P L+G S G LA V
Sbjct: 78 PYVLLGYSAGGNLAFEVVQA 97
>2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP}
Length = 346
Score = 27.5 bits (60), Expect = 8.4
Identities = 6/35 (17%), Positives = 13/35 (37%)
Query: 22 IERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56
I + + + + + G S G L+ +A
Sbjct: 152 ILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALW 186
>3tej_A Enterobactin synthase component F; nonribosomal peptide,
thioesterase, carrier domain, ATP- BIN enterobactin
biosynthesis, ION transport, iron; HET: UF0; 1.90A
{Escherichia coli} PDB: 2roq_A
Length = 329
Score = 27.4 bits (61), Expect = 9.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 37 PVYLVGESLGACLALAVAAR 56
P YL+G SLG LA +AAR
Sbjct: 167 PYYLLGYSLGGTLAQGIAAR 186
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase,
structural genomics, joint CE structural genomics, JCSG;
HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Length = 306
Score = 27.6 bits (62), Expect = 9.4
Identities = 4/26 (15%), Positives = 8/26 (30%), Gaps = 1/26 (3%)
Query: 402 VAAA-FGGKIVPFGVVGEDDLAQVIK 426
+ A F + VG + +
Sbjct: 64 IVAQKFRIPFDLYSAVGMKTHREYLA 89
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.140 0.412
Gapped
Lambda K H
0.267 0.0518 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,862,628
Number of extensions: 432400
Number of successful extensions: 1180
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1138
Number of HSP's successfully gapped: 144
Length of query: 435
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 339
Effective length of database: 4,021,377
Effective search space: 1363246803
Effective search space used: 1363246803
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.0 bits)