BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013865
(435 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P04802|SYDC_YEAST Aspartate--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DPS1 PE=1 SV=3
Length = 557
Score = 330 bits (847), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 197/426 (46%), Positives = 264/426 (61%), Gaps = 24/426 (5%)
Query: 19 QSISKKAAKK----EAAKKAKEERRKEAEAAASAASALSIEEEGPLANNYGDVPLQELQS 74
+ +SKKA KK + ++ KEER + EA A + E+ +NYG +PL +QS
Sbjct: 27 KPLSKKALKKLQKEQEKQRKKEERALQLEAEREAREKKAAAEDTA-KDNYGKLPL--IQS 83
Query: 75 VNDPQTGKWSEAVNGREWTVVGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVST 134
+ +TG+ + V D+EVL R RVH TR G LAF+ +R++ S
Sbjct: 84 RDSDRTGQ-------KRVKFVDLDEAKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASL 136
Query: 135 VQCLATV-KPDSVSKEMVRFVRSLSNESIVDVIGVVSVPDVEIKGAT-QQVEVQIKKLYC 192
+Q L K ++SK MV++ SL+ ESIV V G+V D IK AT Q +E+ I K+Y
Sbjct: 137 IQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYT 196
Query: 193 VSRAAKT-PITIEDASRSEAEIEKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQ 251
+S + PI +EDASRSEAE E A LP VN DTRL+ RVID+RT+ NQ IFRIQ
Sbjct: 197 ISETPEALPILLEDASRSEAEAEAAG-----LPVVNLDTRLDYRVIDLRTVTNQAIFRIQ 251
Query: 252 SQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSIC 311
+ V +FR++L ++ F E+HTPKL+ SEGGS+VF + Y A LAQSPQ +KQ I
Sbjct: 252 AGVCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTYFKGKAYLAQSPQFNKQQLIV 311
Query: 312 GDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNN 371
DF RV+E GPVFRAE+S THRH+ EFTGLD+EM ++HY EV+D + LFV IF L
Sbjct: 312 ADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPK 371
Query: 372 VCKKELEAVAKQYPFEPLKYKP--KTLRLTFEEGVQMLKDAGVEIDPLGDLNTESERKLG 429
E+E V KQYP E K K +RLT++EG++ML+ AG EI DL+TE+E+ LG
Sbjct: 372 RFAHEIELVRKQYPVEEFKLPKDGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLG 431
Query: 430 QLVLEK 435
+LV +K
Sbjct: 432 KLVRDK 437
>sp|Q75JQ1|SYDC1_DICDI Aspartate--tRNA ligase, cytoplasmic 1 OS=Dictyostelium discoideum
GN=aspS1 PE=3 SV=1
Length = 576
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/407 (42%), Positives = 239/407 (58%), Gaps = 49/407 (12%)
Query: 62 NNYGDVPLQELQSVNDPQTGKWSEAVNGREWTVVGALNGSLKDQEVLIRGRVHTTRPVGN 121
+N+G++P+ + S+ REWT V L SL + VLIR R+ T+R G
Sbjct: 68 SNWGELPMNQ------------SKEKITREWTDVSQLTESLVGKSVLIRARLSTSRLQGA 115
Query: 122 KLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDVIGVVSVPDVEIKGATQ 181
L FV +R+ + TVQ + K S SK MV+FV + ESIVDV V V I+ TQ
Sbjct: 116 NLCFVQLRDGLYTVQAVV-AKGGSNSKSMVQFVGQVPKESIVDVQATVVSTSVPIESCTQ 174
Query: 182 Q-VEVQIKKLYCVSRAAKTPITIEDASRSE---------------------------AEI 213
+ VE+Q+ + VS++ P+ IED SR++ ++
Sbjct: 175 KSVELQVSSFFIVSKSTLLPLQIEDLSRAQPLLDKQEDDLKQLEQLLQNTNLNEQEKTDL 234
Query: 214 EKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTP 273
EK E ++ V+Q+ RL+NR +D+R A+Q IFR+QS V +FR+ LL E F+EIH+P
Sbjct: 235 EKKKSECIKFVNVSQEKRLDNRALDLRVPAHQSIFRLQSGVCTLFREQLLGEGFIEIHSP 294
Query: 274 KLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHR 333
K+I+ +SE G++VF+L+Y A LAQSPQL+KQM+IC DF +VFE GPVFRAE+S THR
Sbjct: 295 KIISAASESGASVFKLNYFNTHAYLAQSPQLYKQMAICADFNKVFEIGPVFRAENSNTHR 354
Query: 334 HLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKP 393
HL EF GLD+EM K HY E +D +DRL +IF GL KE+E+V QYPFEP K+
Sbjct: 355 HLTEFVGLDLEMTFKDHYHEALDTLDRLMTSIFRGLETRFAKEIESVNTQYPFEPFKFTY 414
Query: 394 KTLRLTFEEGVQMLKDAGVEIDP-----LGDLNTESERKLGQLVLEK 435
+ R TF+E ML + DP D NT E++LG+++ EK
Sbjct: 415 PSPRFTFDEAAAMLAELN---DPDYIVKDNDFNTRQEKRLGKIIKEK 458
>sp|Q922B2|SYDC_MOUSE Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus GN=Dars PE=2
SV=2
Length = 501
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/334 (48%), Positives = 226/334 (67%), Gaps = 9/334 (2%)
Query: 104 DQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIV 163
D V +R RVHT+R G K F+V+R++ VQ L V D SK+MV+F +++ ESI+
Sbjct: 57 DDVVWVRARVHTSRAKG-KQCFLVLRQQQFNVQALVAVG-DHASKQMVKFAANINKESII 114
Query: 164 DVIGVVSVPDVEIKGATQQ-VEVQIKKLYCVSRA-AKTPITIEDASRSEAEIEKASKEGV 221
DV GVV + +I TQQ VE+ ++K+Y +S A + P+ ++DA R E E E+ + V
Sbjct: 115 DVEGVVRKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGEEDGRATV 174
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
NQDTRL+NRVID+RT +Q IFR+QS + ++FR+ L+++ FVEI TPK+I+ +SE
Sbjct: 175 -----NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAASE 229
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GL
Sbjct: 230 GGANVFTVSYFKNNAYLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGL 289
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFE 401
D+EM HY EV++ + V IF GL + E++ V+KQ+P EP K+ TLRL +
Sbjct: 290 DIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLRLEYC 349
Query: 402 EGVQMLKDAGVEIDPLGDLNTESERKLGQLVLEK 435
E + ML++AGVE+D DL+T +E+ LG+LV EK
Sbjct: 350 EALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEK 383
>sp|O74407|SYDC_SCHPO Aspartate--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dps1 PE=1 SV=1
Length = 580
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/401 (43%), Positives = 234/401 (58%), Gaps = 38/401 (9%)
Query: 61 ANNYGDVPLQELQSVNDPQTGKWSEAVNGREWTVVGALNGSLKDQEVLIRGRVHTTRPVG 120
A YGD+PL S A GR +T + ++ Q VL+R RV+T+R G
Sbjct: 73 AGKYGDLPLNR------------STARPGRTYTQISDISAKNDGQTVLLRARVYTSRLQG 120
Query: 121 NKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDVIGVVSVPDVEIKGAT 180
NK+ F +R++ T+Q LA V D++SK+MV++ S+S ESIV V G+V IK AT
Sbjct: 121 NKMCFFSLRQKYDTIQALAVVNKDTISKQMVKWCGSISLESIVLVEGIVKKSPEIIKSAT 180
Query: 181 -QQVEVQIKKLYCVSRAAKT-PITIEDASRSEAEI----EKASKEGVQLPRVNQDTRLNN 234
Q E+ I +Y +S K P +EDA RSE +I E A++ + RVN DTRL+N
Sbjct: 181 VQDAEIHISSIYVISPIKKNLPFLVEDAGRSEEQIRESEENAAEGDSKFVRVNLDTRLDN 240
Query: 235 RVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQ 294
RV+D+RT NQ IF IQ+ + FR+FLLS +F EIHTPK+ SSEGGS VF++ Y
Sbjct: 241 RVLDLRTPTNQAIFDIQAGICQAFREFLLSNSFNEIHTPKMSGASSEGGSNVFKIQYFKT 300
Query: 295 SACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEV 354
L+QSPQL+KQM I D RVFE GPVFRAEDS T+RH+ EFTGLD+EM +HY EV
Sbjct: 301 DGFLSQSPQLYKQMLIAADRERVFEIGPVFRAEDSNTYRHMTEFTGLDLEMAFNEHYHEV 360
Query: 355 MDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKY-KPKTLRLTFEEGVQMLKDAGVE 413
M+ +++LF+ IF + K++ V +QYP E +R F++ V++LK+AG
Sbjct: 361 MEFIEKLFLYIFKTIREKYAKQVAVVRQQYPSEDFILPDADRIRFHFKDAVKLLKEAGYR 420
Query: 414 I------------------DP-LGDLNTESERKLGQLVLEK 435
DP D +T ER LGQ+V EK
Sbjct: 421 KQLVPGQKVPEDEEFHYCEDPEFDDFSTPEERALGQIVREK 461
>sp|P15178|SYDC_RAT Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Dars
PE=2 SV=1
Length = 501
Score = 299 bits (766), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/334 (47%), Positives = 225/334 (67%), Gaps = 9/334 (2%)
Query: 104 DQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIV 163
D+ V +R RVHT+R G K F+V+R++ VQ L V D SK+MV+F +++ ESI+
Sbjct: 57 DEVVWVRARVHTSRAKG-KQCFLVLRQQQFNVQALVAVG-DHASKQMVKFAANINKESII 114
Query: 164 DVIGVVSVPDVEIKGATQQ-VEVQIKKLYCVSRA-AKTPITIEDASRSEAEIEKASKEGV 221
DV G+V + +I TQQ VE+ ++K+Y +S A + P+ ++DA R E E E+ + V
Sbjct: 115 DVEGIVRKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGEEDGRATV 174
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
NQDTRL+NR+ID+RT +Q IF +QS + ++FR+ L+++ FVEI TPK+I+ +SE
Sbjct: 175 -----NQDTRLDNRIIDLRTSTSQAIFHLQSGICHLFRETLINKGFVEIQTPKIISAASE 229
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GL
Sbjct: 230 GGANVFTVSYFKSNAYLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGL 289
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFE 401
D+EM HY EV++ + V IF GL + E++ V KQ+P EP K+ TLRL +
Sbjct: 290 DIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYC 349
Query: 402 EGVQMLKDAGVEIDPLGDLNTESERKLGQLVLEK 435
E + ML++AGVE+D DL+T +E+ LG+LV EK
Sbjct: 350 EALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEK 383
>sp|Q03577|SYDC_CAEEL Aspartate--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=drs-1 PE=3 SV=1
Length = 531
Score = 298 bits (762), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 253/423 (59%), Gaps = 29/423 (6%)
Query: 21 ISKKAAKKEAAKKAKEERRKEAEAAASAASALSIEEEGPLANNYGDVPLQELQSVNDPQT 80
+SKK K A K K+E K E + A ++++E + YG L
Sbjct: 12 LSKKELNKLARKAKKDE--KAGEKGGNQQQAAAMDQEDASKDFYGSYGL----------- 58
Query: 81 GKWSEAVNGREWTVVGAL-----NGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTV 135
VN +E V+ L N S ++V +RGR+HTTR G K F+V+R+ V TV
Sbjct: 59 ------VNSKEKKVLNFLKVKEINVSNATKDVWVRGRIHTTRSKG-KNCFLVLRQGVYTV 111
Query: 136 QCLATVKPDSVSKEMVRFVRSLSNESIVDVIGVVSVPDVEIKGATQQ-VEVQIKKLYCVS 194
Q +A + +SK+M++FV S+S ESIVDV ++ D I+ TQ+ VE+ ++++ VS
Sbjct: 112 Q-VAMFMNEKISKQMLKFVSSISKESIVDVYATINKVDNPIESCTQKDVELLAQQVFVVS 170
Query: 195 RAA-KTPITIEDASR-SEAEIEKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQS 252
+A K P+ IEDASR + + EKAS++ QL VN DTRL+NRVID+RT + IFRIQ+
Sbjct: 171 TSAPKLPLQIEDASRRAPTDEEKASEQENQLAVVNLDTRLDNRVIDLRTPTSHAIFRIQA 230
Query: 253 QVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICG 312
+ N FR L FVEI PK+I+ SEGG+ VF + Y SA LAQSPQL+KQM+I G
Sbjct: 231 GICNQFRNILDVRGFVEIMAPKIISAPSEGGANVFEVSYFKGSAYLAQSPQLYKQMAIAG 290
Query: 313 DFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNV 372
DF +V+ GPVFRAEDS THRH+ EF GLD+EM HY EVM+ + + +F GL
Sbjct: 291 DFEKVYTIGPVFRAEDSNTHRHMTEFVGLDLEMAFNFHYHEVMETIAEVLTQMFKGLQQN 350
Query: 373 CKKELEAVAKQYPFEPLKYKPKTLRLTFEEGVQMLKDAGVEIDPLGDLNTESERKLGQLV 432
+ E+ AV QYP EP ++ L L + + + +L++ G+EI DL+T E+ LG+LV
Sbjct: 351 YQDEIAAVGNQYPAEPFQFCEPPLILKYPDAITLLRENGIEIGDEDDLSTPVEKFLGKLV 410
Query: 433 LEK 435
EK
Sbjct: 411 KEK 413
>sp|Q3SYZ4|SYDC_BOVIN Aspartate--tRNA ligase, cytoplasmic OS=Bos taurus GN=DARS PE=2 SV=1
Length = 501
Score = 296 bits (757), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/331 (48%), Positives = 221/331 (66%), Gaps = 9/331 (2%)
Query: 107 VLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDVI 166
V +R RVHT+R G K F+V+R++ VQ L V D SK+MV+F +++ ESIVDV
Sbjct: 60 VWVRARVHTSRAKG-KQCFLVLRQQQFNVQALVAVG-DHASKQMVKFAANINKESIVDVE 117
Query: 167 GVVSVPDVEIKGATQQ-VEVQIKKLYCVSRA-AKTPITIEDASRSEAEIEKASKEGVQLP 224
GVV + +I TQQ VE+ ++K+Y +S A + P+ ++DA R E E E+ + V
Sbjct: 118 GVVRKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVEGEEEGRATV--- 174
Query: 225 RVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS 284
NQDTRL+NRVID+RT +Q IFR+QS + + FR+ L ++ FVEI TPK+I+ +SEGG+
Sbjct: 175 --NQDTRLDNRVIDLRTSTSQAIFRLQSGICHPFRETLTNKGFVEIQTPKIISAASEGGA 232
Query: 285 AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVE 344
VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GLD+E
Sbjct: 233 NVFTVSYFKNNAYLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIE 292
Query: 345 MEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGV 404
M HY EV++ + V IF GL + E++ V KQ+P EP K+ TLRL + E +
Sbjct: 293 MAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEAL 352
Query: 405 QMLKDAGVEIDPLGDLNTESERKLGQLVLEK 435
ML++AG+E+ DL+T +E+ LG+LV EK
Sbjct: 353 AMLREAGIEMGDEEDLSTPNEKLLGRLVKEK 383
>sp|P14868|SYDC_HUMAN Aspartate--tRNA ligase, cytoplasmic OS=Homo sapiens GN=DARS PE=1
SV=2
Length = 501
Score = 295 bits (755), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/334 (49%), Positives = 225/334 (67%), Gaps = 9/334 (2%)
Query: 104 DQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIV 163
D+ V +R RVHT+R G K F+V+R++ VQ L V D SK+MV+F +++ ESIV
Sbjct: 57 DEVVWVRARVHTSRAKG-KQCFLVLRQQQFNVQALVAVG-DHASKQMVKFAANINKESIV 114
Query: 164 DVIGVVSVPDVEIKGATQQ-VEVQIKKLYCVSRA-AKTPITIEDASRSEAEIEKASKEGV 221
DV GVV + +I TQQ VE+ ++K+Y +S A + P+ ++DA R EAE E+ + V
Sbjct: 115 DVEGVVRKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATV 174
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
NQDTRL+NRVID+RT +Q +FR+QS + ++FR+ L+++ FVEI TPK+I+ +SE
Sbjct: 175 -----NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASE 229
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GL
Sbjct: 230 GGANVFTVSYFKNNAYLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGL 289
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFE 401
D+EM HY EVM+ + V IF GL + E++ V KQ+P EP K+ TLRL +
Sbjct: 290 DIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYC 349
Query: 402 EGVQMLKDAGVEIDPLGDLNTESERKLGQLVLEK 435
E + ML++AGVE+ DL+T +E+ LG LV EK
Sbjct: 350 EALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEK 383
>sp|Q5R9I5|SYDC_PONAB Aspartate--tRNA ligase, cytoplasmic OS=Pongo abelii GN=DARS PE=2
SV=1
Length = 501
Score = 294 bits (752), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 163/334 (48%), Positives = 226/334 (67%), Gaps = 9/334 (2%)
Query: 104 DQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIV 163
D+ V +R RVHT+R G K F+V+R++ VQ L V D SK+MV+F +++ ESIV
Sbjct: 57 DEVVWVRARVHTSRAKG-KQCFLVLRQQQFNVQALVAVG-DHASKQMVKFAANINKESIV 114
Query: 164 DVIGVVSVPDVEIKGATQQ-VEVQIKKLYCVSRA-AKTPITIEDASRSEAEIEKASKEGV 221
DV GVV + +I+ TQQ VE+ ++K+Y +S A + P+ ++DA R EAE E+ + V
Sbjct: 115 DVEGVVRKVNQKIESCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATV 174
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
NQDTRL+NRVID+RT +Q +FR+QS + ++FR+ L+++ FVEI TPK+I+ +SE
Sbjct: 175 -----NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASE 229
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GL
Sbjct: 230 GGANVFTVSYFKNNAYLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGL 289
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFE 401
D+EM HY EVM+ + V IF GL + E++ V KQ+P EP K+ TLRL +
Sbjct: 290 DIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYC 349
Query: 402 EGVQMLKDAGVEIDPLGDLNTESERKLGQLVLEK 435
E + ML++AGVE+ DL+T +E+ LG L+ EK
Sbjct: 350 EALAMLREAGVEMGDEDDLSTPNEKLLGHLIKEK 383
>sp|Q559M9|SYDC2_DICDI Aspartate--tRNA ligase, cytoplasmic 2 OS=Dictyostelium discoideum
GN=aspS2 PE=3 SV=1
Length = 569
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 204/356 (57%), Gaps = 14/356 (3%)
Query: 90 REWTVVGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKE 149
+EW+ + LN S + VLIR RV R GN L F+ +R+ +S++Q + + ++ SK
Sbjct: 80 KEWSNISDLNESCVGKYVLIRARVSNIRSFGNSLCFLQLRDGLSSIQAVISKNDENNSKS 139
Query: 150 MVRFVRS-LSNESIVDVIGVVSVPDVEIKGAT-QQVEVQIKKLYCVSRA-AKTPITIEDA 206
M+ F+ S ++ ESI+D+ +++ I+ + +E++I L+ S++ + P+ +D
Sbjct: 140 MIHFINSTITKESIIDIEAILTNSSTPIESCIIKNLELKIYSLFLQSKSNSSLPLQFDDL 199
Query: 207 SRSEAEIEKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSEN 266
S+ + G + ++RLNNR +D+RT N IF+IQS + N+FR LL +
Sbjct: 200 SKPTT-YQNYDDNGYTYV-IPLNSRLNNRCLDLRTFYNLSIFKIQSAISNLFRDQLLIND 257
Query: 267 FVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRA 326
F+EIH+PK+I S S F+L+Y + A L++S Q ++Q++I DF RVFE GPV+R
Sbjct: 258 FIEIHSPKIIKQSINENS--FKLNYFNEIAYLSESTQFYRQLAIVSDFKRVFEIGPVYRT 315
Query: 327 EDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAK-QYP 385
+ +THRHL EFT LD EM K HY EV+D +D L ++IF L + EL+ + Q
Sbjct: 316 DLGHTHRHLNEFTSLDFEMTFKDHYHEVLDFLDNLMISIFKILETNYENELKIINNYQLQ 375
Query: 386 FEPLKYKPKTLRLTFEEGVQML------KDAGVEIDPLGDLNTESERKLGQLVLEK 435
FE K+ KT R TF E ML ++ ++ LN + ER G++V EK
Sbjct: 376 FEKFKFSTKTPRFTFSEVKLMLIEFSENENNKFCMELFDYLNVQEERIFGKIVKEK 431
>sp|Q8SRQ8|SYDC_ENCCU Probable aspartate--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU06_0790 PE=3 SV=1
Length = 473
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 198/340 (58%), Gaps = 10/340 (2%)
Query: 98 LNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPD-SVSKEMVRF--V 154
L+GSL + V +RG V + G K F+V+R+ TVQC+ D S M F +
Sbjct: 19 LDGSLDGRCVSVRGFVFKSSCTG-KYIFIVLRDGGCTVQCMCEKPTDGSGGLTMPEFSSL 77
Query: 155 RSLSNESIVDVIGVVSVPDVEIKGATQQ-VEVQIKKLYCVSRAAKT-PITIEDASRSEAE 212
R +++ES +++ G V +EI G +++ +EV+I +S A K+ P ++D S + E
Sbjct: 78 RKVTHESYIEIRGRVVKQGMEISGCSKKDIEVRILGFRVLSIADKSLPFAMKDVSATAEE 137
Query: 213 IEKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHT 272
EK L V RL+NR +D+R + FR+ V FR +L F+EI T
Sbjct: 138 REKNP----TLQNVAYHIRLDNRAMDLRAPQTRATFRVVDGVMFFFRTYLRQNGFMEIKT 193
Query: 273 PKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTH 332
KLI SSEGG+ +F +DY + A +AQSPQL+KQM+I G F RV+E G V+RAE+S +
Sbjct: 194 SKLIGSSSEGGANLFSVDYFKRKAFMAQSPQLYKQMAIVGGFKRVYEIGHVYRAEESNIN 253
Query: 333 RHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYK 392
R+L EF GLD+EMEI Y++V+ + + V+IFD L +ELE + + FE LKY+
Sbjct: 254 RYLSEFVGLDMEMEICTDYNDVIRFIHSMLVSIFDNLKKEYGEELETIRAFHAFEDLKYR 313
Query: 393 PKTLRLTFEEGVQMLKDAGVEIDPLGDLNTESERKLGQLV 432
+ LT E V +L + GVE+ D N+ESE+KLG +V
Sbjct: 314 RDPVVLTHRECVDLLLNEGVEMGYEDDFNSESEKKLGSVV 353
>sp|B7XHQ4|SYDC_ENTBH Probable aspartate--tRNA ligase, cytoplasmic OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_21705 PE=3 SV=1
Length = 474
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 196/342 (57%), Gaps = 17/342 (4%)
Query: 98 LNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSK--EMVRFVR 155
+NG++ + IRG + + +++ F+++R+R+ VQC+ K +VS E R ++
Sbjct: 29 MNGTV----IRIRGFIESITSCSSQI-FILLRDRLEKVQCI-IFKSTNVSSIYEFSR-LK 81
Query: 156 SLSNESIVDVIGVVSVPDVEIKGATQQ-VEVQIKKLYCVS-RAAKTPITIEDASRSEAEI 213
L ES +++ G V ++ IK AT+Q +E+ I L + +K P ++D + E
Sbjct: 82 KLPLESFIEIEGQVVFAEIPIKRATKQNIEIVISTLNILGPVVSKLPFQLKDCKIAGKES 141
Query: 214 EKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTP 273
+ + V + RL+NR +D R Q I +I Q FR +L + F+EI T
Sbjct: 142 DTNT------ITVGYNLRLDNRFLDFRLPVTQSIIKIIDQTMYTFRTYLRTHEFIEIKTS 195
Query: 274 KLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHR 333
K+I SEGG+ +F L+Y + A LAQSPQL+KQ++I G RV+E G V+RAE S +R
Sbjct: 196 KIIQSGSEGGANLFSLNYFNKPAYLAQSPQLYKQLAIIGGLKRVYEIGHVYRAEVSNINR 255
Query: 334 HLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKP 393
+L EF GLD+EME++ Y + + + LF+ IF+ N KKELE + + Y F LKY+
Sbjct: 256 YLSEFVGLDIEMEMETTYIDFIHFLHSLFINIFESFKNEMKKELEIIRQYYEFVDLKYRS 315
Query: 394 KTLRLTFEEGVQMLKDAGVEIDPLGDLNTESERKLGQLVLEK 435
+ +T+++ V MLK ++ID D + E ER LG+++ +K
Sbjct: 316 TPIIITYKDAVDMLKSKNIQIDYGCDFSREHERILGKIIKDK 357
>sp|Q8TXG4|SYD_METKA Aspartate--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=aspS PE=3 SV=1
Length = 431
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 188/330 (56%), Gaps = 27/330 (8%)
Query: 105 QEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVD 164
+EV + G VH R +G + FV++R+R VQ T+ V KE V L+ ES++
Sbjct: 17 EEVRLAGWVHEVRDLGG-IKFVLLRDRTGIVQL--TLPKQKVPKETFEKVPKLTKESVIR 73
Query: 165 VIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLP 224
V G V + A VEV +++ +S + T + ++ + +A++
Sbjct: 74 VEGTVQANE----KAPGGVEVIPQRIEVLSES-DTHLPLDPTGKVDADL----------- 117
Query: 225 RVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS 284
DTRL+ RV+D+R Q IF+I++ V R+FL F+E+HTPK+IA ++EGG+
Sbjct: 118 ----DTRLDARVLDLRREEPQAIFKIRNVVTTAIREFLEERGFIEVHTPKIIASATEGGT 173
Query: 285 AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVE 344
+F + Y + A LAQSPQL+KQM + F RV+E GP+FRAE+ T RHL E +D+E
Sbjct: 174 ELFPVVYFERDAYLAQSPQLYKQMLMAAGFERVYEIGPIFRAEEHNTRRHLNEAISVDIE 233
Query: 345 MEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGV 404
M + +VM +++ L +F + C+KELEA+ ++ P + + R+T+EE +
Sbjct: 234 MSFIESEEDVMRVLEELLAHVFRKVREECEKELEALDRELP----ELETPFERITYEETL 289
Query: 405 QMLKDAGVEIDPLGDLNTESERKLGQLVLE 434
+L + G+E++ DL TE+ERKLG++ E
Sbjct: 290 DLLSEHGIEVEWGEDLPTEAERKLGEIFEE 319
>sp|Q9V036|SYD_PYRAB Aspartate--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=aspS PE=3 SV=1
Length = 438
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 190/334 (56%), Gaps = 29/334 (8%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
L ++V + G V + +G + F+ +R+R VQ A K V +E+ + + L++E
Sbjct: 14 LNGKKVKVAGWVQEVKDLGG-IKFIWIRDREGIVQVTAPKK--KVPQEIFKLIPKLNSED 70
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
++ V G+V+ A E+ +KL +S+A KTP+ ++ + +AE+
Sbjct: 71 VIVVEGIVNF----TPKAKLGFEIIPEKLEVISKA-KTPLPLDPTGKVKAEL-------- 117
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL+NR +D+R IF+I+S V R+F E F+EIHTPK+IA ++E
Sbjct: 118 -------DTRLDNRFMDLRNPRVMSIFKIRSSVFRATREFFYKEGFIEIHTPKIIATATE 170
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F L Y A LAQSPQL+KQM + +VFE GP+FRAE+ T RHL E +
Sbjct: 171 GGTELFPLKYFENDAFLAQSPQLYKQMMMSTGLDKVFEIGPIFRAEEHNTTRHLNEAWSI 230
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFE 401
D EM + EVMD+++RL + + + + +KEL+ + + EP K P R+T++
Sbjct: 231 DAEMAFIESEEEVMDLLERLILYVINYVRENNEKELKILEFELN-EPKKPFP---RITYD 286
Query: 402 EGVQMLKDAGVEIDPLG-DLNTESERKLGQLVLE 434
E +++L D G EI P G D++TE E+ LG+ +LE
Sbjct: 287 EALEILSDLGKEI-PWGEDIDTEGEKLLGKYMLE 319
>sp|O58776|SYD_PYRHO Aspartate--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=aspS
PE=3 SV=1
Length = 438
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 189/334 (56%), Gaps = 29/334 (8%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
L + V + G V + +G + F+ +R+R VQ A K VS+E+ + + L++E
Sbjct: 14 LNGKRVKVAGWVQEVKDLGG-IKFIWIRDREGIVQVTAPKK--KVSQEIFKLIPKLNSED 70
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
++ V G+V+ A EV +KL +SRA KTP+ ++ + +AE+
Sbjct: 71 VIVVEGIVNF----TPKAKLGFEVIPEKLEVISRA-KTPLPLDPTGKVKAEL-------- 117
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL+NR +D+R IF+I+S V R+F SE F+EIHTPK+IA ++E
Sbjct: 118 -------DTRLDNRFMDLRNPKVMAIFKIRSSVFRAVREFFYSEGFIEIHTPKIIATATE 170
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F L Y + A LAQSPQL+KQM + +VFE P+FRAE+ T RHL E +
Sbjct: 171 GGTELFPLKYFERDAFLAQSPQLYKQMMMATGLDKVFEIAPIFRAEEHNTTRHLNEAWSI 230
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFE 401
D EM ++ EVMD+++RL + + + +KEL+ + FE + K R+T++
Sbjct: 231 DAEMAFIENEGEVMDLLERLISYVINYVREHNEKELKTLE----FELNEPKRPFPRITYD 286
Query: 402 EGVQMLKDAGVEIDPLG-DLNTESERKLGQLVLE 434
+ +++L D G EI P G D++TE E+ LG+ + E
Sbjct: 287 KALEILSDLGKEI-PWGEDIDTEGEKLLGKYMAE 319
>sp|Q58950|SYD_METJA Aspartate--tRNA ligase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=aspS PE=3 SV=1
Length = 438
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 180/326 (55%), Gaps = 28/326 (8%)
Query: 105 QEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVD 164
QEV+I G VH+ R +G K+ FV++R+R TVQ +A + V E+ ++ L E ++
Sbjct: 23 QEVIIMGWVHSIRALG-KIIFVILRDREGTVQIVAPKQ--KVGDELFSQIKKLGAEDVIA 79
Query: 165 VIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLP 224
V G V + + A E+ +L ++ AK P+ ++ A + AE+
Sbjct: 80 VKGKV----IANEKAPNGFEILPLELEVIN-TAKRPLPLDPAEKVPAEL----------- 123
Query: 225 RVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS 284
DTRL NR +D+R Q IF+I+S++ R L +E F+E++TPKL+A +EGG+
Sbjct: 124 ----DTRLENRFLDLRRPKVQAIFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTEGGT 179
Query: 285 AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVE 344
+F + Y + A L QSPQL+KQM + RVFE P+FRAE+ T RHL E T +D+E
Sbjct: 180 ELFPISYFEREAFLGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATSIDIE 239
Query: 345 MEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGV 404
M + MDI++++ F + KKE+E + ++ P K+ R+T++E +
Sbjct: 240 MAFADD-KDAMDILEKVVYNAFVDVYENRKKEIETLGIEFELPPEKFD----RITYDEAI 294
Query: 405 QMLKDAGVEIDPLGDLNTESERKLGQ 430
+ GVEI DL+ E+E+ +G+
Sbjct: 295 DIANAKGVEISWGEDLSREAEKAIGE 320
>sp|Q8U2G6|SYD_PYRFU Aspartate--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=aspS PE=3 SV=1
Length = 438
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 186/334 (55%), Gaps = 29/334 (8%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
L + V + G V + +G + FV +R+R VQ A K VS+E+ + + L++E
Sbjct: 14 LNGKRVKVAGWVQEVKDLGG-IKFVWIRDREGIVQITAPKK--KVSEEIFKLIPKLNSED 70
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
+V V G+V+ A E+ +K ++R +TP+ ++ + +AE+
Sbjct: 71 VVVVEGIVNF----TPKAKLGFEIIPEKFEILNRT-QTPLPLDPTGKVKAEL-------- 117
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL+NR ID+R IF+I+S V R+F +E F+EIHTPK+IA ++E
Sbjct: 118 -------DTRLDNRFIDLRNPKVMAIFKIRSNVFRAIREFFYNEGFIEIHTPKIIATATE 170
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F + Y A LAQSPQL+KQ+ + +VFET P+FRAE+ T RHL E +
Sbjct: 171 GGTELFPIKYFENDAFLAQSPQLYKQIMMATGLDKVFETAPIFRAEEHNTTRHLNEAWSI 230
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFE 401
D E+ ++ EVMD+++ L V + + ++EL+ + FE + K R+T++
Sbjct: 231 DAEIAFIENEEEVMDVLENLVVYAINYVREHNERELKILE----FELEEPKQPFPRVTYD 286
Query: 402 EGVQMLKDAGVEIDPLG-DLNTESERKLGQLVLE 434
+ +++L D G EI P G D++TE E+ LG+ + E
Sbjct: 287 KALEILSDLGKEI-PWGEDIDTEGEKLLGKYMSE 319
>sp|Q52428|SYD_PYRKO Aspartate--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=aspS PE=1 SV=2
Length = 438
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 180/334 (53%), Gaps = 29/334 (8%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
L Q+V + G V + +G + F+ +R+R VQ A K V E+ + + L +E
Sbjct: 14 LNGQKVKVAGWVWEVKDLGG-IKFLWIRDRDGIVQITAPKK--KVDPELFKLIPKLRSED 70
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
+V V GVV+ A E+ +K+ ++RA +TP+ ++ + +AE+
Sbjct: 71 VVAVEGVVNF----TPKAKLGFEILPEKIVVLNRA-ETPLPLDPTGKVKAEL-------- 117
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL+NR +D+R IF+I+S V R F F+EIHTPK+IA ++E
Sbjct: 118 -------DTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATE 170
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F + Y + A LAQSPQL+KQ+ + RV+E P+FRAE+ T RHL E +
Sbjct: 171 GGTELFPMKYFEEDAFLAQSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSI 230
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFE 401
D EM + EVM ++RL + + KEL+ + FE + K R++++
Sbjct: 231 DSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILN----FELEEPKLPFPRVSYD 286
Query: 402 EGVQMLKDAGVEIDPLG-DLNTESERKLGQLVLE 434
+ +++L D G EI P G D++TE ER LG+ ++E
Sbjct: 287 KALEILGDLGKEI-PWGEDIDTEGERLLGKYMME 319
>sp|A6USZ9|SYD_META3 Aspartate--tRNA ligase OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=aspS PE=3 SV=1
Length = 438
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 180/340 (52%), Gaps = 38/340 (11%)
Query: 98 LNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSL 157
+N + QE++I G H+ R +G KL F+++R+R T+Q +A + VS+E +SL
Sbjct: 16 VNSEMDGQEIIIMGWNHSIRKLG-KLVFIILRDREGTIQIVAPKQ--KVSEETFATAKSL 72
Query: 158 SNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKAS 217
E ++ + G V V + + + + ++IK L A TP+ ++ + + A+I
Sbjct: 73 GKEDVMAIKGKV-VANEKAPAGFEVIPIEIKIL----NKADTPLPLDPSEKVSADI---- 123
Query: 218 KEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIA 277
DTRL+ R +D+R Q +F+++S+V R F+++ TPKL+A
Sbjct: 124 -----------DTRLDKRFLDLRRPKIQSLFKLRSEVLKSIRNTFHDNGFIDVDTPKLVA 172
Query: 278 GSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCE 337
++EGG+ +F + Y + A L QSPQL+KQM + F RVFE GP+FRAE+ T RHL E
Sbjct: 173 SATEGGTELFPISYFDKEAFLGQSPQLYKQMMMAAGFDRVFEIGPIFRAEEHNTRRHLNE 232
Query: 338 FTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVA-----KQYPFEPLKYK 392
+D EM + M+I++++ F + N +KEL+ + ++ PF
Sbjct: 233 AISIDCEMSFADE-KDAMEILEKVINNAFTDIYNNNQKELQTLGIDLKVQETPFP----- 286
Query: 393 PKTLRLTFEEGVQMLKDAGVEIDPLGDLNTESERKLGQLV 432
R+ + E V M+ GVE++ D + +E LG+++
Sbjct: 287 ----RIEYTEAVDMVNAKGVEMEWGEDFSRPAEAALGEMM 322
>sp|O29342|SYD_ARCFU Aspartate--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=aspS
PE=3 SV=1
Length = 430
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 182/332 (54%), Gaps = 34/332 (10%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
++ Q+V + G VH R +G L F+++R+R VQ T+ VSK++ + + + ES
Sbjct: 12 MEGQKVTLYGWVHEVRDLGG-LVFILLRDREGIVQI--TLPRKFVSKQVFKLAKKIRRES 68
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
++ V G V + + G + + I+ V A P+ +E + AE+
Sbjct: 69 VIAVTGEVRREE-KAPGGVEIIPESIE----VLNEADAPLPLEVTEKVPAEL-------- 115
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL++R +D+R Q IFRI+ QV R+FL E F+E+HTPK+++ ++E
Sbjct: 116 -------DTRLDHRFMDLRRPRVQAIFRIRHQVMQSVREFLSEEGFIEVHTPKIVSTATE 168
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F + Y + A L QSPQL+KQ+ + F +VFE GP+FRAE+ T RHL E +
Sbjct: 169 GGTELFPISYFEKEAFLNQSPQLYKQVLMAAGFEKVFEIGPIFRAEEHNTTRHLNEAISI 228
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEA--VAKQYPFEPLKYKPKTLRLT 399
D+EM H + VMD+++RL +++ + C++ L V+ + P P R+T
Sbjct: 229 DIEMSFTDH-NGVMDVLERLVQRVYEDVAEKCERYLGWLEVSLEIPELPFP------RIT 281
Query: 400 FEEGVQMLKDAGVEIDPLG-DLNTESERKLGQ 430
++E ++ G EI P G DL+T + + +G+
Sbjct: 282 YDEAREIAARKGEEI-PWGEDLSTNALKLVGE 312
>sp|O26328|SYD_METTH Aspartate--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=aspS PE=3 SV=1
Length = 437
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 174/332 (52%), Gaps = 38/332 (11%)
Query: 106 EVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDV 165
EV + G VH R +G + FV++R+R +Q A K + K++ + +R L ES+V
Sbjct: 23 EVTVMGWVHEIRDLGG-IIFVLLRDRDGLIQITAPSK--KIEKDLFKSIRKLKKESVVAF 79
Query: 166 IGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLPR 225
G V E A E+ I V +K P+ ++ + +AEI
Sbjct: 80 GGTVQ----ESGKAPGGFEI-IPSFLKVLNISKQPLPLDPTEKVKAEI------------ 122
Query: 226 VNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSA 285
DTRL+ R +D+R + IF+I+S++ + R FL + F+EI+TPKL+A ++EGG+
Sbjct: 123 ---DTRLDARFLDLRKPSVSAIFKIKSRMLHSVRVFLEEQGFLEINTPKLVASATEGGTE 179
Query: 286 VFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEM 345
+F + Y + A L QSPQL+KQ+ + RV+E P+FRAE+ T RHL E +D+E
Sbjct: 180 LFPITYFEREAFLGQSPQLYKQIMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVISIDIEA 239
Query: 346 EIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAK-----QYPFEPLKYKPKTLRLTF 400
H +VM I++ L V + + +N C LE + + + PFE RL +
Sbjct: 240 SFVDH-EDVMKILENLVVRVIEDVNEHCTDALETLGRTLEVPETPFE---------RLEY 289
Query: 401 EEGVQMLKDAGVEIDPLGDLNTESERKLGQLV 432
+E V+M+ GV + DL +E+ LG+++
Sbjct: 290 DEAVEMVNSKGVPMKHGEDLPRAAEKALGEIM 321
>sp|Q466Y5|SYD_METBF Aspartate--tRNA ligase OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=aspS PE=3 SV=1
Length = 444
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 175/333 (52%), Gaps = 33/333 (9%)
Query: 105 QEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVD 164
Q++ + G VH R +G + FVV+R+R Q T+ + KE+ R L ES++
Sbjct: 23 QKITLAGWVHEVRDLGG-ICFVVLRDREGKAQV--TLVKKKIDKELFDAARRLVRESVIS 79
Query: 165 VIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLP 224
V G V + A E+ +++ V A +P+ ++ + EAE+
Sbjct: 80 VTGSVKFEE----KAPNGYELLPEEI-TVLNVANSPLPMDTTGKVEAEL----------- 123
Query: 225 RVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS 284
DTRL++R ID+R +F+I+ Q R++ + F+E TPK++A ++EGG+
Sbjct: 124 ----DTRLDSRFIDLRRAETTAVFKIRHQALQATREYFVQNGFIETATPKVVATATEGGT 179
Query: 285 AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVE 344
A+F + Y + A L QSPQL KQ+ + G F RVFE GP+FRAE+ T RHL E T +DVE
Sbjct: 180 ALFPITYFDREAFLNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVE 239
Query: 345 MEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKT--LRLTFEE 402
+ H+ +VM+I++ L ++ + CK LE + + LK PKT L+LT+ E
Sbjct: 240 VSFADHF-DVMEILENLVAYVYAQVIEKCKPSLETLGIE-----LKV-PKTPFLKLTYNE 292
Query: 403 GVQMLKDAGVEIDPLG-DLNTESERKLGQLVLE 434
++++ E G DL T E +G V E
Sbjct: 293 VIEIINARSEEKMHWGDDLGTFGEHIVGNYVYE 325
>sp|Q8TQ68|SYD_METAC Aspartate--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=aspS PE=3 SV=1
Length = 444
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 175/333 (52%), Gaps = 33/333 (9%)
Query: 105 QEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVD 164
Q++ + G +H R +G + FVV+R+R Q T+ + KE+ R L ES++
Sbjct: 23 QKITLAGWIHEVRDLGG-ICFVVLRDREGKAQV--TLVKKKIDKELFDAARRLIRESVIS 79
Query: 165 VIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLP 224
V G V + G E +IK L A +P+ ++ + EAE+
Sbjct: 80 VTGSVKFEEKAPNGYELLPE-EIKVL----NVAGSPLPMDTTGKVEAEL----------- 123
Query: 225 RVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS 284
DTRL++R ID+R +F+I+ + R++ + F+E TPK++A ++EGG+
Sbjct: 124 ----DTRLDSRFIDLRRAETTAVFKIRHEALQAIREYFVKNKFIETATPKVVATATEGGT 179
Query: 285 AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVE 344
A+F + Y + A L QSPQL KQ+ + G F RVFE GP+FRAE+ T RHL E T +DVE
Sbjct: 180 ALFPITYFDREAFLNQSPQLFKQILMGGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVE 239
Query: 345 MEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKT--LRLTFEE 402
+ H+ +VM+I++ L I+ + CK LE + + LK PKT L+LT++E
Sbjct: 240 VSFADHF-DVMEILENLVAHIYTRVIENCKASLEILGVE-----LKV-PKTPFLKLTYDE 292
Query: 403 GVQMLKDAGVEIDPLG-DLNTESERKLGQLVLE 434
++++ E G DL T E +G V E
Sbjct: 293 VIEIVNSRCEEKMHWGDDLGTLGEHTVGNYVYE 325
>sp|A6VHK5|SYD_METM7 Aspartate--tRNA ligase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=aspS PE=3 SV=1
Length = 438
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 174/329 (52%), Gaps = 30/329 (9%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
+ QEV++ G VH+ R +G KLAFV++R+R T+Q A V V +E + L E
Sbjct: 20 MDGQEVILMGWVHSIRALG-KLAFVILRDREGTIQ--AVVPKQKVDEETFEIAKKLGKED 76
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
I+ + G V + KG + + ++I+ V A P+ ++ + + AEI
Sbjct: 77 IIAIRGKVVANEKAPKG-FEVIPIEIR----VLNKADAPLPLDPSEKVPAEI-------- 123
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL+ R +DIR Q IF+I+S++ R+ E FVE++TPKL+A ++E
Sbjct: 124 -------DTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADEGFVEVNTPKLVASATE 176
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F + Y + A L QSPQL+KQM + G F +VFE +FRAE+ T RHL E +
Sbjct: 177 GGTELFPISYFEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSI 236
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTL-RLTF 400
D EM + M +++++ + + +E+E + + + KT +LT+
Sbjct: 237 DTEMSFVNE-KDAMAMLEKVVYNCYADIEYNRPQEIELLELNW-----EIPEKTFDKLTY 290
Query: 401 EEGVQMLKDAGVEIDPLGDLNTESERKLG 429
E + + GVEI+ DL+ +ER +G
Sbjct: 291 TEAIDIAISKGVEIEWGEDLSRAAERAVG 319
>sp|A9A945|SYD_METM6 Aspartate--tRNA ligase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=aspS PE=3 SV=1
Length = 438
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 174/329 (52%), Gaps = 30/329 (9%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
+ QEV++ G VH+ R +G KLAFV++R+R T+Q A V V +E + L E
Sbjct: 20 MDGQEVILMGWVHSIRALG-KLAFVILRDREGTIQ--AVVPKQKVDEETFEIAKKLGKED 76
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
I+ + G V + KG + + ++I+ V A P+ ++ + + AEI
Sbjct: 77 IIAIRGKVVANEKAPKG-FEVIPIEIR----VLNKADAPLPLDPSEKVPAEI-------- 123
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL+ R +DIR Q IF+I+S++ R+ E F+E++TPKL+A ++E
Sbjct: 124 -------DTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADEGFIEVNTPKLVASATE 176
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F + Y + A L QSPQL+KQM + G F +VFE +FRAE+ T RHL E +
Sbjct: 177 GGTELFPISYFEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSI 236
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTL-RLTF 400
D EM + M +++++ + + +E+E + + + KT ++T+
Sbjct: 237 DTEMSFVNE-KDAMAMLEKVVYNCYADIEYNRPQEIELLELNW-----EVPEKTFDKVTY 290
Query: 401 EEGVQMLKDAGVEIDPLGDLNTESERKLG 429
E + + GVEI+ DL+ +ER +G
Sbjct: 291 TEAIDIAISKGVEIEWGEDLSRAAERAVG 319
>sp|Q6LWU0|SYD_METMP Aspartate--tRNA ligase OS=Methanococcus maripaludis (strain S2 /
LL) GN=aspS PE=3 SV=1
Length = 438
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 171/326 (52%), Gaps = 30/326 (9%)
Query: 105 QEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVD 164
QEV + G VH+ R +G KLAFV++R+R T+Q A V V +E + L E IV
Sbjct: 23 QEVTLMGWVHSIRALG-KLAFVILRDRAGTIQ--AVVPKQKVDEETFEIAKKLGKEDIVA 79
Query: 165 VIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLP 224
+ G V + KG + + ++I+ V A P+ ++ + + AEI
Sbjct: 80 IKGKVVANEKAPKG-FEVIPIEIR----VLNKADAPLPLDPSEKVSAEI----------- 123
Query: 225 RVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS 284
DTRL+ R +DIR Q IF+I+S++ R+ E F+E++TPKL+A ++EGG+
Sbjct: 124 ----DTRLDKRFLDIRRPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGT 179
Query: 285 AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVE 344
+F + Y + A L QSPQL+KQM + G F +VFE +FRAE+ T RHL E +D E
Sbjct: 180 ELFPISYFEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDSE 239
Query: 345 MEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTL-RLTFEEG 403
M + M +++++ + + E+E + + + KT ++T+ E
Sbjct: 240 MSFVNE-KDAMAMLEKVVYNCYSDIEYNRPNEIELLELNW-----EIPEKTFDKVTYTEA 293
Query: 404 VQMLKDAGVEIDPLGDLNTESERKLG 429
+ + GVEI+ DL+ +ER +G
Sbjct: 294 IDIAIAKGVEIEWGEDLSRAAERAVG 319
>sp|Q8Q0R2|SYD_METMA Aspartate--tRNA ligase OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=aspS
PE=3 SV=1
Length = 444
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 175/333 (52%), Gaps = 33/333 (9%)
Query: 105 QEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVD 164
Q+V + G VH R +G + FVV+R+R Q T+ + K++ R L ES++
Sbjct: 23 QKVTLAGWVHEVRDLGG-ICFVVLRDREGKAQV--TLVKKKIDKDLFDAARRLVRESVIS 79
Query: 165 VIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLP 224
V G V + G + + +I L + +P+ ++ + EAE+
Sbjct: 80 VTGSVKFEEKAPNGY-ELLPDEINVL----NVSGSPLPMDTTGKVEAEL----------- 123
Query: 225 RVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS 284
DTRL++R ID+R +F+I+ + R++ + NF+E TPK++A ++EGG+
Sbjct: 124 ----DTRLDSRFIDLRRAETTAVFKIRHESLRAIREYFVKYNFIETATPKVVATATEGGT 179
Query: 285 AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVE 344
A+F + Y + A L QSPQL KQ+ + G F RVFE GP+FRAE+ T RHL E T +DVE
Sbjct: 180 ALFPITYFDREAFLNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVE 239
Query: 345 MEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKT--LRLTFEE 402
+ H+ +VM++++ L ++ + CK LE + LK PKT L+LT++E
Sbjct: 240 VSFADHF-DVMELLENLVAYVYTRVIENCKSSLEVLGVD-----LKV-PKTPFLKLTYDE 292
Query: 403 GVQMLKDAGVEIDPLG-DLNTESERKLGQLVLE 434
++++ E G DL T E +G V E
Sbjct: 293 VIEIINSRCEEKMHWGDDLGTLGEHTVGDHVYE 325
>sp|Q976I3|SYD_SULTO Aspartate--tRNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=aspS PE=1 SV=1
Length = 429
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 177/328 (53%), Gaps = 36/328 (10%)
Query: 105 QEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDS--VSKEMVRFVRSLSNESI 162
+EV+ G VH R +G K F+++R++ Q + + +S+E L+ ES+
Sbjct: 17 KEVIWAGWVHLLRDLGGK-KFIILRDKTGLGQVVVDKNSSAFGISQE-------LTQESV 68
Query: 163 VDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQ 222
+ V G+V K A + +E+ +++ +S+A K P+ ++ + + +A+I
Sbjct: 69 IQVRGIVKAD----KRAPRGIELHAEEITLLSKA-KAPLPLDVSGKVKADI--------- 114
Query: 223 LPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEG 282
DTRL RV+D+R Q + +IQS FR+ L E F+EI TPK+IA ++EG
Sbjct: 115 ------DTRLRERVLDLRRQEMQAVIKIQSLALKAFRETLYKEGFIEIFTPKIIASATEG 168
Query: 283 GSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLD 342
G+ +F + Y G+ A LAQSPQL+K++ + G RVFE P +RAE+S T HL EF +D
Sbjct: 169 GAQLFPVIYFGKEAFLAQSPQLYKEL-MAGVVERVFEVAPAWRAEESDTPFHLAEFISMD 227
Query: 343 VEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEE 402
VEM Y++VM +++++ I + K+EL+ + +EP + K RL + E
Sbjct: 228 VEMAF-ADYNDVMQLLEKILHNIVKTIKEEGKEELKILN----YEPPEVKIPIKRLKYTE 282
Query: 403 GVQMLKDAGVEIDPLGDLNTESERKLGQ 430
+++L+ G I D+ T R L +
Sbjct: 283 AIEILRSKGYNIKFGDDIGTPELRILNE 310
>sp|A4G0V5|SYD_METM5 Aspartate--tRNA ligase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=aspS PE=3 SV=1
Length = 438
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 173/329 (52%), Gaps = 30/329 (9%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
+ QEV++ G VH+ R +G KLAFV++R+R T+Q A V V +E + L E
Sbjct: 20 MDGQEVILMGWVHSIRALG-KLAFVILRDREGTIQ--AVVPKQKVDEETFAIAKKLGKED 76
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
I+ + G V + KG + + ++I+ V A P+ ++ + + AEI
Sbjct: 77 IIAIRGKVVANEKAPKG-FEVIPIEIR----VLNKADAPLPLDPSEKVAAEI-------- 123
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL+ R +DIR Q IF+I+S++ R+ FVE++TPKL+A ++E
Sbjct: 124 -------DTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADGGFVEVNTPKLVASATE 176
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F + Y + A L QSPQL+KQM + G F +VFE +FRAE+ T RHL E +
Sbjct: 177 GGTELFPISYFEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISI 236
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTL-RLTF 400
D EM + M +++++ + + +E+E + + + KT ++T+
Sbjct: 237 DTEMSFVNE-KDAMAMLEKVVYNCYADIEYNRPQEIELLELNW-----EIPEKTFDKITY 290
Query: 401 EEGVQMLKDAGVEIDPLGDLNTESERKLG 429
E + + GVEI+ DL+ +ER +G
Sbjct: 291 TEAIDIANAKGVEIEWGEDLSRAAERAVG 319
>sp|Q2NHT0|SYD_METST Aspartate--tRNA ligase OS=Methanosphaera stadtmanae (strain DSM
3091) GN=aspS PE=3 SV=1
Length = 439
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 171/331 (51%), Gaps = 32/331 (9%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
L + V + G VH R +G + FV++R++ Q A K +S+EM+ VR+ E+
Sbjct: 21 LAGETVKVTGWVHEIRDLGG-IVFVLIRDKNGITQLTAPSK--KLSEEMMADVRAARKET 77
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
I+ + G V E A VE+ I V ++ P+ ++ + EAE+
Sbjct: 78 IITLTGTVQ----ESAKAPNGVEI-IPSNIDVINVSQLPLPLDTTEKVEAEM-------- 124
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL++R +D+R IF+I+SQ+ + R + +F EI TPKL+A ++E
Sbjct: 125 -------DTRLDSRFMDLRKHDVSAIFKIKSQMLHTARNYFYDNDFTEITTPKLVASATE 177
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F + Y + A L QSPQL+KQM + VFE G +FRAE+ T RHL E +
Sbjct: 178 GGTELFPITYFEKEAFLGQSPQLYKQMMMATGLDNVFEIGQIFRAEEHDTLRHLNEALSI 237
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQY--PFEPLKYKPKTLRLT 399
D EM K ++ M+ ++ L I ++ C+KEL + + P EP +T
Sbjct: 238 DAEMSFKSQ-TDAMNTLEELIKRILSDISTNCQKELSDLDHELDIPTEPFPI------VT 290
Query: 400 FEEGVQMLKDAGVEIDPLGDLNTESERKLGQ 430
+EE + ++ VE++ DLN +E+ LG+
Sbjct: 291 YEEVIDIVNSRDVEMNYGEDLNRAAEKVLGE 321
>sp|Q9Y9U7|SYD_AERPE Aspartate--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=aspS PE=3
SV=2
Length = 442
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 176/333 (52%), Gaps = 34/333 (10%)
Query: 101 SLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNE 160
SL V + G + R +G +L F++VR+R +Q ATVK ++ +R L E
Sbjct: 16 SLVGGRVRVCGWAYRIRDLG-RLKFILVRDRSGVIQ--ATVKRGESPEDALRAAEDLKLE 72
Query: 161 SIVDVIGVVSVPDVEIKGATQQ--VEVQIKKLYCVSRAAK-TPITIEDASRSEAEIEKAS 217
S+V V G E++ A + VEV++++L +S + P+ +E + EKAS
Sbjct: 73 SVVCVEG-------ELRQAPTREGVEVKVERLEVLSTPVEPLPLEVEGS-------EKAS 118
Query: 218 KEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIA 277
LP TRL R +DIR IF +++ V +FR + S+ FVEI TPK++A
Sbjct: 119 -----LP-----TRLKYRWLDIRNPMVSAIFELEAMVAKVFRDYYWSQGFVEIFTPKIVA 168
Query: 278 GSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCE 337
+E G+ VF + Y ++A LAQSPQ +KQ ++ RVFE GPVFRAE +T RHL E
Sbjct: 169 AGTESGAEVFPVVYFDKTAFLAQSPQFYKQFAVIAGLERVFEIGPVFRAEPHHTSRHLNE 228
Query: 338 FTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKT-L 396
+ LD+E+ + Y++VM+ V+ I L ++ LE + P P PK L
Sbjct: 229 YHSLDIEVGFIESYNDVMNYVEGFMRAIVRMLEEDGRRVLELYGVELPRIPASGIPKIPL 288
Query: 397 RLTFEEGVQMLKDAGVEIDPLGDLNTESERKLG 429
R +E + + G +++ DL++E ER +G
Sbjct: 289 RKAYE---ILEEKYGKKVEYGEDLDSEGERLMG 318
>sp|A6UQQ8|SYD_METVS Aspartate--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=aspS PE=3 SV=1
Length = 438
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 172/328 (52%), Gaps = 28/328 (8%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
+ QEV++ G VH+ R +G KLAF+++R+R +Q + V V +E + L E
Sbjct: 20 MDGQEVILMGWVHSIRALG-KLAFIILRDREGLIQMV--VPKQKVDEETFELAKKLGKED 76
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
++ + G V + KG + + ++I+ L A P+ ++ + + AEI
Sbjct: 77 VITIRGKVVANEKAPKG-FEVIPMEIRIL----NKADAPLPLDPSEKVPAEI-------- 123
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL+ R +DIR Q IF+I+S++ R+ E F+E++TPKL+A ++E
Sbjct: 124 -------DTRLDRRFLDIRRPKIQAIFKIRSEMLKSIRKTFSEEGFIEVNTPKLVASATE 176
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F + Y + A L QSPQL+KQM + G F +VFE +FRAE+ T RHL E +
Sbjct: 177 GGTELFPISYFEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISI 236
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFE 401
D EM + M +++++ + + E+E + + P K PK +T+
Sbjct: 237 DTEMSFVNE-KDAMAMLEKVVHNCYTDIEYNRPSEIETLELNFEI-PEKTFPK---VTYS 291
Query: 402 EGVQMLKDAGVEIDPLGDLNTESERKLG 429
E V + GVEI+ DL+ +E+ +G
Sbjct: 292 EAVDVAVSKGVEIEWGEDLSRAAEKAIG 319
>sp|Q5V1N2|SYD_HALMA Aspartate--tRNA ligase OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=aspS PE=3 SV=1
Length = 434
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 171/333 (51%), Gaps = 31/333 (9%)
Query: 107 VLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDVI 166
V + G VH R +G +AF+++R+ +Q + D + ++V ++ ES++ V
Sbjct: 16 VTVAGWVHEIRDLGG-IAFLILRDTTGKIQV--KFEKDEMDDDLVETGLNVQRESVISVT 72
Query: 167 GVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLPRV 226
G V E A VEV + + +S A E ++ + K +LP
Sbjct: 73 GAVE----EEPRAPTGVEVTPESVDVISEA-----------DPELPLDPSGKVDAELP-- 115
Query: 227 NQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAV 286
TRL+NR +D+R + IF I+++V R+ N EI+TPK++A +EGG+ +
Sbjct: 116 ---TRLDNRTLDLRKDEVKAIFEIRAEVLRSVREAFRELNCTEINTPKIVATGTEGGTEL 172
Query: 287 FRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEME 346
F + Y GQ A + QSPQL KQ+ + RVFE GP+FRAE+ T RHL E T +D E
Sbjct: 173 FPITYFGQEAFMNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESA 232
Query: 347 IKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPF-EPLKYKPKTLRLTFEEGVQ 405
H +E MD + + + ++G+ C+ +LEA+ + F P P RLT+EE +
Sbjct: 233 FYDH-TEAMDACEHVVQSAYEGVAENCQDQLEALGLEDEFAAPEGDFP---RLTYEEALD 288
Query: 406 MLKDAGVEIDPL---GDLNTESERKLGQLVLEK 435
+ G +PL DL+TE+E LGQ V E
Sbjct: 289 KINATGELDEPLVWGDDLSTEAEHVLGQEVGEH 321
>sp|Q9HJM1|SYD_THEAC Aspartate--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=aspS PE=3 SV=1
Length = 428
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 179/339 (52%), Gaps = 47/339 (13%)
Query: 101 SLKDQE----VLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRS 156
+L+D E V++ G + R + N ++F+++R+ T+Q AT K D + ++++
Sbjct: 8 TLRDHEDGAKVVVYGWMQEARIMKN-ISFLMIRDNTGTIQ--ATFKNDEATLDIIK---R 61
Query: 157 LSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRA-AKTPITIEDASRSEAEIEK 215
++ ESIV V G V+ + G +E+ + V+ A A P+ + D +++ E
Sbjct: 62 INRESIVRVDGSVNKKSISKAG----IEISGTSISIVNEAEAPLPLPVVDPVQADLE--- 114
Query: 216 ASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKL 275
TRLN+R +D+R IFRI+S + RQ+L S+ F+E+HTPK+
Sbjct: 115 --------------TRLNSRFMDLRKRNISAIFRIESALLWGIRQYLHSQKFIEVHTPKI 160
Query: 276 IAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHL 335
+A ++EGGS +F + Y + A L QSPQL+K++ + F RVFE GP FRAE+ T RHL
Sbjct: 161 VAAATEGGSDLFPVRYFEKDAYLNQSPQLYKEVLMSAGFDRVFEVGPAFRAEEHNTTRHL 220
Query: 336 CEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELE-----AVAKQYPFEPLK 390
EFT +D+EM H ++ M +++ I G+ N ++ E ++ P P
Sbjct: 221 NEFTSIDIEMSFADH-NDAMAMLEN---AIRSGIENAVRENAEDFESLGISISVPETPFP 276
Query: 391 YKPKTLRLTFEEGVQMLKDAGVEIDPLGDLNTESERKLG 429
R+T+E+ + +L+ G++ D + + R +G
Sbjct: 277 ------RITYEQCIDLLQKDGIDFTFGDDFSPDQLRTIG 309
>sp|Q2FRU5|SYD_METHJ Aspartate--tRNA ligase OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=aspS PE=3 SV=1
Length = 430
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 167/321 (52%), Gaps = 28/321 (8%)
Query: 111 GRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDVIGVVS 170
G H R +G LAF+++R+R +Q TV V+ E+ +R++S ES+V V G V
Sbjct: 19 GWAHEIRDLGG-LAFLLIRDRTGIIQV--TVPKKKVAPEIAETIRAISRESVVRVTGTVK 75
Query: 171 VPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLPRVNQDT 230
P+ + G + + I+ VS +A TP+ ++ A + AE+ DT
Sbjct: 76 -PEGKAPGGRELIPDAIE---IVSLSA-TPLPLDVAEKVPAEL---------------DT 115
Query: 231 RLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLD 290
RL+NR +D R IF+I++ V + R F F+EI+T K++A ++EGG+ +F +
Sbjct: 116 RLDNRFLDARRPRVSAIFKIRNAVQHATRNFFFENGFIEINTSKIVAAATEGGTELFPIA 175
Query: 291 YKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKH 350
Y + A L QSPQL+KQM + F +V+E GP+FRAE+ T +HL E T +D+E+ H
Sbjct: 176 YFEKEAFLNQSPQLYKQMMMAAGFEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFTDH 235
Query: 351 YSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGVQMLKDA 410
VM ++ L I+ ++ C + + P K P RL + E +++
Sbjct: 236 LG-VMQTLEDLIRDIYQFVDKTCSDAIADLGLDDFAVPEKGFP---RLPYSEAIEIASAT 291
Query: 411 GVEIDPLG-DLNTESERKLGQ 430
E G D+ T +ER +G+
Sbjct: 292 CEEDIAYGDDIGTAAERAIGE 312
>sp|A3CXH4|SYD_METMJ Aspartate--tRNA ligase OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=aspS PE=3 SV=1
Length = 429
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 33/327 (10%)
Query: 109 IRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDVIGV 168
I G VH R +G L+F ++R+R +Q T+ V E++ RS+S ES+V V G
Sbjct: 17 IVGWVHEVRDLGG-LSFFLIRDRTGIIQV--TIPKKKVPAEILDTARSVSRESVVRVRGT 73
Query: 169 VSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLPRVNQ 228
V I+ A E+ ++L +S A++P+ ++ A + AE+
Sbjct: 74 VKA----IEKAPGGREIVPEELEIIS-TAESPLPLDVAEKVSAEM--------------- 113
Query: 229 DTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFR 288
DTRL++R +D R + IF I+S V FL S + I TPK++A ++EGG+ +F
Sbjct: 114 DTRLDSRFLDARKPRVRAIFFIRSAVTCAATAFLASRGCINIATPKIVAAATEGGTELFP 173
Query: 289 LDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIK 348
+ Y + A + QSPQL+KQM + F VFE GP+FRAE+ T RHL E T LDVE+
Sbjct: 174 IAYFEKEAFMNQSPQLYKQMMMAAGFEAVFEIGPIFRAEEHNTVRHLNEATSLDVEVSFA 233
Query: 349 KHYSEVMDIVDRLFVTIFDGLNNVCKKELE--AVAKQYPFEPLKYKPKTLRLTFEEGVQM 406
H ++VM++++ L V ++D + C + L + + P +P R+ + E +++
Sbjct: 234 DH-NDVMELLEDLIVHVYDHVAKDCSEHLAELEIDLKVPSKPFP------RIPYAEAIEI 286
Query: 407 LKDAGVEIDPLG-DLNTESERKLGQLV 432
E G DL+ +ER +G V
Sbjct: 287 ANKTIEEKLAFGDDLSPAAERAIGDTV 313
>sp|Q979P6|SYD_THEVO Aspartate--tRNA ligase OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=aspS PE=3
SV=1
Length = 428
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 176/339 (51%), Gaps = 37/339 (10%)
Query: 95 VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 154
+G+L + V I G + + + N ++F+++R+R TVQ PD +V +
Sbjct: 6 IGSLRELNHNDNVEIYGWLQDLKLLKN-VSFLIMRDRTGTVQVTFKNTPD-----IVNLL 59
Query: 155 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAK-TPITIEDASRSEAEI 213
+ L ES++ + G ++ V G +EV + + ++R+ + P+ + D +++ E
Sbjct: 60 KELPRESVLKISGKINKKSVSKSG----LEVSGESVEVLNRSERPLPLPVIDPVQADLE- 114
Query: 214 EKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTP 273
TRLNNR ID+R IF +S + R+FL S+ F+E+HTP
Sbjct: 115 ----------------TRLNNRFIDLRKRDVSSIFNAESSILWGIREFLHSQGFIEVHTP 158
Query: 274 KLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHR 333
K++A ++EGG+ +F + Y A L QSPQL+K++ + F +VFE GP FRAE+ T R
Sbjct: 159 KIVAAATEGGADLFPVKYFENDAYLNQSPQLYKEILMSSGFEKVFEVGPAFRAEEHNTTR 218
Query: 334 HLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELE--AVAKQYPFEPLKY 391
HL EFT +D+EM H ++ M I++ + + + N K+L+ + P P
Sbjct: 219 HLNEFTSIDIEMSFADH-NDAMRILENAVKSGIENMINENGKDLQENGINISIPEIPFP- 276
Query: 392 KPKTLRLTFEEGVQMLKDAGVEIDPLGDLNTESERKLGQ 430
R+T++E +++L+ G+E D + E R +G+
Sbjct: 277 -----RITYKECIKLLEKEGLEFQFGNDFSPEELRIIGR 310
>sp|Q6KZQ3|SYD_PICTO Aspartate--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=aspS PE=3 SV=1
Length = 423
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 158/291 (54%), Gaps = 29/291 (9%)
Query: 164 DVIGVVSVPDVEIKGATQQVEVQIK--------KLYCVSRAA--KTPITIEDASRSEAEI 213
D+ + S+ + ++ T +++V +K ++Y ++R + K T++ SRS++ I
Sbjct: 22 DIRRIKSIVFIILRDVTGRIQVTVKSENVKNFDEVYKINRESVLKVHGTVDHQSRSKSGI 81
Query: 214 E---------KASKEGVQLPRVNQ-----DTRLNNRVIDIRTLANQGIFRIQSQVGNIFR 259
E A++ + L V++ DTRLNNR ID+R N IF+ QS + R
Sbjct: 82 EIIADSVEILNAAEAPLPLGVVDKVQADLDTRLNNRYIDLRKDENLIIFKAQSTLLWGIR 141
Query: 260 QFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFE 319
++L F+E+HTPK++A ++EGG+ +F + Y + A L QSPQL+K++ + F +VFE
Sbjct: 142 EYLNRLGFIEVHTPKIVAAATEGGADLFPVKYFERDAYLNQSPQLYKEILMAAGFEKVFE 201
Query: 320 TGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEA 379
GP FRAE T RHL EFT +D+EM H ++VMD+++ + L N EL
Sbjct: 202 VGPAFRAEKENTLRHLNEFTSIDIEMSFADH-NDVMDVLENTVKNAINTLKNNLGDEL-- 258
Query: 380 VAKQYPFEPLKYKPKTLRLTFEEGVQMLKDAGVEIDPLGDLNTESERKLGQ 430
++ F + R+T+ E + L +G +++ D + E+ R LG+
Sbjct: 259 --NKHGFNIDSINGRIPRITYREAIDYLNSSGFQMNFGDDFSPEAARVLGE 307
>sp|Q3IT59|SYD_NATPD Aspartate--tRNA ligase OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=aspS PE=3 SV=1
Length = 433
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 170/331 (51%), Gaps = 33/331 (9%)
Query: 107 VLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDVI 166
V + G VH R +G +AF+++R+ +Q + D + E+V +++ ES++ V
Sbjct: 16 VTVAGWVHEVRDLGG-IAFLILRDTTGQIQV--KFEKDEMDDELVETGLNVARESVITVS 72
Query: 167 GVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLPRV 226
G V E A VEV + + +S A T + ++ + +AE+
Sbjct: 73 GDVE----EEPRAPTGVEVTPETVEVLSEA-DTELPLDPTGKVDAEL------------- 114
Query: 227 NQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAV 286
TRL+NR +D+R+ Q IF I+++V R+ N EI+T K++A +EGG+ +
Sbjct: 115 --STRLDNRTLDLRSEEGQAIFEIRAEVLRAVREAFRDANATEINTSKIVATGTEGGTEL 172
Query: 287 FRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEME 346
F + Y G+ A + QSPQL KQ+ + RVFE GP+FRAE+ T RHL E T +D E
Sbjct: 173 FPITYFGEEAFMNQSPQLFKQLVAGSNIERVFEIGPIFRAEEHNTPRHLNEATSIDFEGA 232
Query: 347 IKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFE-PLKYKPKTLRLTFEEGVQ 405
H ++ MD+ +++ ++ + C +LEA+ FE P P RL++EE ++
Sbjct: 233 FCDH-TDAMDVCEQVVTAAYEAVAENCTDQLEALGITEEFEVPETPFP---RLSYEEAIE 288
Query: 406 MLKDAGVEIDPL----GDLNTESERKLGQLV 432
+ G E+D DL TE E+ LG V
Sbjct: 289 RINATG-ELDEQLVWGDDLPTEGEKALGDDV 318
>sp|A2SPG1|SYD_METLZ Aspartate--tRNA ligase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=aspS PE=3 SV=1
Length = 429
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 167/325 (51%), Gaps = 33/325 (10%)
Query: 109 IRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDVIGV 168
I G VH R +G L F++VR+R +Q T+ V+ E++ V+ + ES+++ GV
Sbjct: 17 IAGWVHEERDLGG-LTFLLVRDRTGILQV--TIPKKKVTPEVLAAVKEATRESVIECEGV 73
Query: 169 VSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLPRVNQ 228
V + G E+ L VSRA +TP+ ++ + + AE+
Sbjct: 74 VKATEKAPGGR----ELVPDMLRVVSRA-ETPLPLDVSEKVPAEL--------------- 113
Query: 229 DTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFR 288
DTRL+NR +D+R IF+I++ ++L F ++ TPK++A ++EGG+ +F
Sbjct: 114 DTRLDNRYLDLRKPRINAIFQIRNACLRAISEYLWDNGFTQVQTPKIVAAATEGGTELFP 173
Query: 289 LDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIK 348
L Y + A L QSPQL+KQM + F RVFE G +FRAE+ T RHL E T +D+EM
Sbjct: 174 LAYFDKEAFLNQSPQLYKQMLMSAGFDRVFEIGAIFRAEEHNTVRHLNEATSIDIEMSFA 233
Query: 349 KHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVA---KQYPFEPLKYKPKTLRLTFEEGVQ 405
+ M +++ + + + + + C L + + P P R+T++E ++
Sbjct: 234 NE-EDAMHVLENVVASAYQYVADHCGDALATLGITDFKVPTVPFP------RITYKEAIE 286
Query: 406 MLKDAGVEIDPLGDLNTESERKLGQ 430
+ G + DL+T +ER +G+
Sbjct: 287 ISTAGGEPLVFGDDLSTAAERIVGE 311
>sp|Q18KP5|SYD_HALWD Aspartate--tRNA ligase OS=Haloquadratum walsbyi (strain DSM 16790)
GN=aspS PE=3 SV=1
Length = 434
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 171/331 (51%), Gaps = 37/331 (11%)
Query: 106 EVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDV 165
E+ + G VH R +G +AF+++R+R +Q + D ++ E+V+ + ES++ +
Sbjct: 15 EITVAGWVHEIRDLGG-IAFLILRDRSGKIQI--KFEKDEMNDEIVQTGLDVPRESVISI 71
Query: 166 IGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLPR 225
GV D E + T +V+I T I + ++ +E ++ + K
Sbjct: 72 TGVA---DDEPRAPT---DVEI---------VPTAIEVLSSADTELPLDPSGK------- 109
Query: 226 VNQD--TRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGG 283
VN D TRL+NR +D+R + +F+I+S+V R EI+TPK++A +EGG
Sbjct: 110 VNADLSTRLDNRTLDLRKKEVKAVFQIRSEVLRAARDAFRELGCTEINTPKIVATGTEGG 169
Query: 284 SAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDV 343
+ +F + Y G+ A + QSPQL KQ+ I RVFE GP+FRAE+ T RHL E T +D
Sbjct: 170 TELFPITYFGEEAFMNQSPQLFKQLMIGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDF 229
Query: 344 EMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFE-PLKYKPKTLRLTFEE 402
E H +E MD + + + G+ C ELE + + F P + P R++++E
Sbjct: 230 ESAFINH-AEAMDACEYVVTAAYQGVAENCITELETLGLRDGFSVPDESFP---RISYQE 285
Query: 403 GVQMLKDAGVEIDPL----GDLNTESERKLG 429
++ + G E+D DL T+ ER LG
Sbjct: 286 AIERINATG-ELDEQLVWGDDLPTDGERALG 315
>sp|Q12XU7|SYD_METBU Aspartate--tRNA ligase OS=Methanococcoides burtonii (strain DSM
6242) GN=aspS PE=3 SV=1
Length = 443
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 173/337 (51%), Gaps = 33/337 (9%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
+ D +V + G VH R +G + FVVVR+R Q T+ + KE+ R L ES
Sbjct: 19 IGDDKVTVCGWVHEVRDLGG-ICFVVVRDREGRAQI--TLVKKKIDKEIFDAARKLVRES 75
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
IV V G +G I + V A++P+ ++ + +AE+
Sbjct: 76 IVAVTGTAKA-----EGKAPNGYEIIPESIVVLNEAESPLPMDTTGKVDAEL-------- 122
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
DTRL++R +D+R IF+I+ +V R FL + ++E +PK++A ++E
Sbjct: 123 -------DTRLDSRFMDLRRERTTAIFKIRHEVLRAVRDFLSKDGYIETCSPKVVATATE 175
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+++F + Y + A L QSPQL KQ+ + G +VFE GP+FRAE+ T RHL E T +
Sbjct: 176 GGTSLFPITYFDREAFLNQSPQLFKQILMSGGLDKVFEIGPIFRAEEHDTRRHLNEATSI 235
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKT--LRLT 399
D+E H+ +VM++++ + +++ + L+A+ + PKT +++
Sbjct: 236 DIEASFLDHF-DVMEVLEDMVAYVYEQVIENEAASLKALDIELSV------PKTPFMKVP 288
Query: 400 FEEGVQMLKDAGVE-IDPLGDLNTESERKLGQLVLEK 435
+ + + ++ E ++ GDL T +E +G+ V ++
Sbjct: 289 YSQAIDIVNAESEETVEWGGDLGTVAEHTIGEHVFKE 325
>sp|Q980V3|SYD_SULSO Aspartate--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=aspS PE=3 SV=1
Length = 429
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 177/340 (52%), Gaps = 42/340 (12%)
Query: 94 VVGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRF 153
+V LN L EV + G VH R +G K+ F+++R++ Q + ++ K
Sbjct: 6 LVSELNPKLDGSEVKVAGWVHNVRNLGGKI-FILLRDKSGIGQIVVEKGNNAYDK----- 59
Query: 154 VRSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 213
V ++ ES + V GVV D A VEV K + +S A ++P+ ++ + +A+I
Sbjct: 60 VINIGLESTIVVNGVVKA-DAR---APNGVEVHAKDIEILSYA-RSPLPLDVTGKVKADI 114
Query: 214 EKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTP 273
DTRL R++D+R L Q + +IQS FR+ L FVE+ TP
Sbjct: 115 ---------------DTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKHGFVEVFTP 159
Query: 274 KLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHR 333
K+IA ++EGG+ +F + Y G+ A LAQSPQL+K++ + G RVFE P +RAE+S T
Sbjct: 160 KIIASATEGGAQLFPVLYFGKEAFLAQSPQLYKEL-LAGAIERVFEIAPAWRAEESDTPY 218
Query: 334 HLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKP 393
HL EF +DVEM Y+++M +++++ + + + C+ EL+ L Y P
Sbjct: 219 HLSEFISMDVEMAFAD-YNDIMALIEQIIYNMINDVKRECENELKI---------LNYTP 268
Query: 394 KTLRL-----TFEEGVQMLKDAGVEIDPLGDLNTESERKL 428
+R+ ++ + +++LK GV I D+ T R L
Sbjct: 269 PNVRIPIKKVSYSDAIELLKSKGVNIKFGDDIGTPELRVL 308
>sp|O07683|SYD_HALSA Aspartate--tRNA ligase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=aspS PE=3 SV=1
Length = 436
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 161/335 (48%), Gaps = 35/335 (10%)
Query: 105 QEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVD 164
++ I G VH R +G L FV+VR+ +Q +A K D + ++ LS+E +V
Sbjct: 17 EDTTIAGHVHELRDLGGIL-FVIVRDATGRLQVVA--KEDD-TPDLFETAEGLSSEDVVQ 72
Query: 165 VIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLP 224
V G + D G VE+ +L VS A P +IE + +A++
Sbjct: 73 VTGTLEASDQAPGG----VELAPTELTVVSEATDVP-SIEISKDVDADLS---------- 117
Query: 225 RVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGS 284
TRL+ R +D+R + + +F ++S+ + F E+ TP+L +EGG+
Sbjct: 118 -----TRLDERHLDVRKPSTKAVFSLRSKAMGAMTDWFYDNRFEEVDTPELSTAGAEGGA 172
Query: 285 AVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVE 344
+F + Y + A L+QSPQL+KQ+ + R+FE G FRAED T RH+ E DVE
Sbjct: 173 DLFPVVYYDKEAYLSQSPQLYKQILVASGVDRLFEVGHAFRAEDFGTSRHVSEIAMFDVE 232
Query: 345 MEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGV 404
+ + + +VMD+ + + ++EL+ + + R+TFEE
Sbjct: 233 LGYVEDHHDVMDVQEESLRHTIRHVVEHAQRELDELGSDLSVPEADFP----RITFEEAR 288
Query: 405 QMLKDAGVEIDPL----GDLNTESERKLGQLVLEK 435
++L D E D + DL+T+ ER LG+ E+
Sbjct: 289 EILAD---EYDHVPEDDNDLDTKGERLLGEYFEEQ 320
>sp|Q8ZYM8|SYD_PYRAE Aspartate--tRNA ligase OS=Pyrobaculum aerophilum (strain ATCC 51768
/ IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=aspS PE=3
SV=1
Length = 428
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 162/338 (47%), Gaps = 34/338 (10%)
Query: 91 EWTVVGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEM 150
WT + +L EV++ G V R +G ++ FVVVR+R VQ T+K +
Sbjct: 7 HWT--AEITPNLHGTEVVVAGWVWELRDIG-RVKFVVVRDREGFVQV--TLKAGKTPDHL 61
Query: 151 VRFVRSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSE 210
+ LS E +V + G+V + A VE+ +++ +++A PI I +
Sbjct: 62 FKVFAELSREDVVVIKGIVEASKI----AKSGVEIFPSEIWILNKAKPLPIDIWSETPDL 117
Query: 211 AEIEKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEI 270
A TRL R +D++ N +F + S + R+ L E FVE+
Sbjct: 118 A------------------TRLKWRSVDLKRPRNLVVFTVASAMLRSIREVLYGEGFVEV 159
Query: 271 HTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSY 330
TPK+I S+EGG+ +F + Y + A L+QSPQL+K+ + RVFE GP +RAE
Sbjct: 160 FTPKIIVTSTEGGAELFPVMYFERVAYLSQSPQLYKE-QLTASLERVFEIGPAYRAEKHN 218
Query: 331 THRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLK 390
T HL EF +D E Y+++MDI++++ + ++ K LE V + E L
Sbjct: 219 TDYHLNEFISVDAEAAFMD-YNDIMDILEKIMRRLASTVSEYAPK-LEEVGIKALME-LS 275
Query: 391 YKPKTLRLTFEEGVQMLKDAGVEIDPLGDLNTESERKL 428
P R+ ++E V L+ G ++ D E ++ L
Sbjct: 276 NIP---RVDYDEAVDRLRQLGYAVNWGDDFTVEMQKAL 310
>sp|O24822|SYD_HALVO Aspartate--tRNA ligase OS=Haloferax volcanii GN=aspS PE=3 SV=2
Length = 433
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 138/268 (51%), Gaps = 24/268 (8%)
Query: 107 VLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIVDVI 166
V + G VH R +G +AF+++R+ +Q + D + ++V + ES++ V
Sbjct: 16 VTVAGWVHEVRDLGG-IAFLILRDTSGKIQV--KFEKDEMDDDLVETGLGVHRESVISVT 72
Query: 167 GVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGVQLPRV 226
G V D E + T VEV + L ++ A + + ++ + + +AE+
Sbjct: 73 GEV---DEEPRAPTG-VEVTPESLDVIAEA-EAQLPLDPSGKVDAELS------------ 115
Query: 227 NQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAV 286
TRL+NR +D+R + IF I+++V R EI+TPK++A +EGG+ +
Sbjct: 116 ---TRLDNRTLDLRKDEVKAIFEIRAEVQRAVRDKFRDLRATEINTPKIVATGTEGGTEL 172
Query: 287 FRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEME 346
F + Y GQ A + QSPQL KQ+ + RVFE GP+FRAE+ T RHL E T +D E
Sbjct: 173 FPITYFGQEAFMNQSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSIDFESA 232
Query: 347 IKKHYSEVMDIVDRLFVTIFDGLNNVCK 374
H +E MD+ + + ++ + C+
Sbjct: 233 FIDH-TEAMDVCEAVVTAAYEAVEENCQ 259
>sp|O57980|SYN_PYRHO Asparagine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=asnS PE=1 SV=1
Length = 434
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 30/328 (9%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
L ++V + G V+T VG K+ F+ +R+ VQ A V + V +E + L ES
Sbjct: 14 LDGKKVRLAGWVYTNMRVGKKI-FLWIRDSTGIVQ--AVVAKNVVGEETFEKAKKLGRES 70
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
V V G+V + GA EV ++KL + ++ PI E+AS E +
Sbjct: 71 SVIVEGIVKADERAPGGA----EVHVEKLEVIQAVSEFPIP--------ENPEQASPELL 118
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
L+ R + IRT I +++ + R++LL + + E+ P L+ G+ E
Sbjct: 119 ----------LDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVE 168
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F+L Y + A L+QS QL+ + +I G +V+ P FRAE S T RHL EF L
Sbjct: 169 GGATLFKLKYFDKYAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 227
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLK-YKPKTLRLTF 400
++E + ++M + + L + + KKE+E LK +P R+++
Sbjct: 228 ELEAAWMDLW-DIMKVEEELVSYMVQRTLELRKKEIEMFRDD--LTTLKNTEPPFPRISY 284
Query: 401 EEGVQMLKDAGVEIDPLGDLNTESERKL 428
+E + +L+ GV ++ DL + ER L
Sbjct: 285 DEAIDILQSKGVNVEWGDDLGADEERVL 312
>sp|Q9PQK5|SYD_UREPA Aspartate--tRNA ligase OS=Ureaplasma parvum serovar 3 (strain ATCC
700970) GN=aspS PE=3 SV=1
Length = 578
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 133/272 (48%), Gaps = 30/272 (11%)
Query: 104 DQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNESIV 163
++ V++ G V R +GN L FV +++R VQ AT K D V E+ + LS E ++
Sbjct: 14 EKNVILNGWVKKVRKMGN-LVFVDLKDRFGIVQIFAT-KSDGVFNELTQ----LSREDVI 67
Query: 164 DVIGVVSV---PDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEG 220
+V G+V + P+ ++K T + E+ +KK+ S+A P+ IED + + EI
Sbjct: 68 NVEGLVLLRKNPNNDLK--TGRFEIHVKKILIYSKAKTPPLIIEDETDANEEI------- 118
Query: 221 VQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSS 280
R R +D+R N IF ++S+V FR +L S++F+E TP L +
Sbjct: 119 ----------RFRYRYLDLRRDVNLKIFELRSKVYQAFRNYLYSQDFIETETPILAKPTP 168
Query: 281 EGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTG 340
EG + + L QSPQ KQ+ + F + F+ FR ED + R EFT
Sbjct: 169 EGARDFYVPTRTRKFYALPQSPQTFKQLLMVAGFQKYFQITKCFRDEDLRSDRQ-PEFTQ 227
Query: 341 LDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNV 372
+D+E+ E+ +++ L +F NV
Sbjct: 228 VDIELSFADEI-EIQTLIENLLKYVFKQTINV 258
>sp|Q49Y68|SYD_STAS1 Aspartate--tRNA ligase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=aspS
PE=3 SV=1
Length = 588
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 37/305 (12%)
Query: 93 TVVGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVR 152
T G + SL DQEV ++G VH R +G L FV +R+R VQ + PD S+E ++
Sbjct: 6 TYCGLVTESLLDQEVTLKGWVHNRRDLGG-LIFVDLRDREGYVQIV--FNPD-FSEEALK 61
Query: 153 FVRSLSNESIVDVIGVVSVPD---VEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRS 209
++ +E +V+V G+V D V K AT QVEVQ+ ++ ++++ P I + +++
Sbjct: 62 TAETVRSEYVVEVKGLVKKRDPQTVNPKIATGQVEVQVSEINIINKSETPPFAINEENQN 121
Query: 210 EAEIEKASKEGVQLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVE 269
V+++ RL R +D+R F+++ Q RQ+L E F +
Sbjct: 122 ----------------VDENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDKEGFFD 165
Query: 270 IHTPKLIAGSSEGGSAVF---RLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRA 326
I TP L + EG R+ + G+ L QSPQ+ KQ+ + F + ++ FR
Sbjct: 166 IETPVLTKSTPEGARDYLVPSRV-HDGEFYALPQSPQIFKQLLMISGFDKYYQIVKCFRD 224
Query: 327 EDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPF 386
ED R EFT +D+EM +VMD+ + + L NV K+++ V PF
Sbjct: 225 EDLRADRQ-PEFTQVDIEMSFVDQ-EDVMDMGEEM-------LQNVV-KDVKDVEIPRPF 274
Query: 387 EPLKY 391
+ Y
Sbjct: 275 PRMTY 279
>sp|Q9V251|SYN_PYRAB Asparagine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=asnS PE=3 SV=1
Length = 434
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 163/330 (49%), Gaps = 30/330 (9%)
Query: 102 LKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFVRSLSNES 161
L + V + G V++ VG K+ F+ +R+ +Q + + + V +++ + L ES
Sbjct: 14 LDGKRVKLAGWVYSNMRVGKKI-FLWIRDSTGIIQTV--IAKNVVGEDVFETAKKLGRES 70
Query: 162 IVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEIEKASKEGV 221
V V G+V + GA EV ++KL + ++ PI E+AS E +
Sbjct: 71 SVIVEGIVKADERAPGGA----EVHVEKLKVIQAVSEFPIP--------ENPEQASPELL 118
Query: 222 QLPRVNQDTRLNNRVIDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSE 281
L+ R + IR+ I R++ + R++LL E + E+ P L+ G+ E
Sbjct: 119 ----------LDYRHLHIRSPKVSAIMRVKETLIMAAREWLLREGWHEVFPPILVTGAVE 168
Query: 282 GGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGL 341
GG+ +F+L Y + A L+QS QL+ + +I G +V+ P FRAE S T RHL EF L
Sbjct: 169 GGATLFKLKYFDKVAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 227
Query: 342 DVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLK-YKPKTLRLTF 400
++E + ++M + + L + + KKE+E LK +P R+++
Sbjct: 228 ELEAAWMDLW-DIMKVEEELVSYMVQRTLELRKKEIEMFRDD--LTTLKNTEPPFPRISY 284
Query: 401 EEGVQMLKDAGVEIDPLGDLNTESERKLGQ 430
+E +++L+ GV+I+ D+ + ER L Q
Sbjct: 285 DEAIEILQSKGVKIEWGDDMGADEERVLTQ 314
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,722,045
Number of Sequences: 539616
Number of extensions: 6020354
Number of successful extensions: 29566
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 640
Number of HSP's that attempted gapping in prelim test: 26298
Number of HSP's gapped (non-prelim): 2138
length of query: 435
length of database: 191,569,459
effective HSP length: 120
effective length of query: 315
effective length of database: 126,815,539
effective search space: 39946894785
effective search space used: 39946894785
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)