BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013869
(435 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H151|AAE13_ARATH Malonate--CoA ligase OS=Arabidopsis thaliana GN=AAE13 PE=1 SV=1
Length = 544
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/434 (71%), Positives = 359/434 (82%), Gaps = 8/434 (1%)
Query: 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKN-EN 59
MEVFKAA+ + S + D +AI+AD KSYSY QL SSALRIS L +D ++TK E
Sbjct: 1 MEVFKAAFSEASNSCDRIAIKADGKSYSYGQLTSSALRISKLFLKDDTTNGGQETKKYEG 60
Query: 60 SAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMV 119
L G ARIGIVAKPS EFVAGVLGTWFSG +AVPLALSYPE+ELLHVM+DSDIS++
Sbjct: 61 FGSLKG---ARIGIVAKPSAEFVAGVLGTWFSGGVAVPLALSYPEAELLHVMNDSDISLL 117
Query: 120 LSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMD--GQRGEDPALIVY 177
LSTED+ E ++ +A+KSGA+F LIPPV N +SET +Q Q + + G+ +DPALIVY
Sbjct: 118 LSTEDHSETMKTIAAKSGARFHLIPPVVNSTSETVACNQFQDDSFEAEGKFLDDPALIVY 177
Query: 178 TSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237
TSGTTGKPKGVVHTH SI++QV+MLTEAWEYTSAD FLHCLPLHHVHGLFNAL APLYA
Sbjct: 178 TSGTTGKPKGVVHTHNSINSQVRMLTEAWEYTSADHFLHCLPLHHVHGLFNALFAPLYAR 237
Query: 238 ATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297
+ VEF+PKFSV GIW+RWRESYPVN + ++IT FTGVPTMYTRLIQGYEAMD E+Q +
Sbjct: 238 SLVEFLPKFSVSGIWRRWRESYPVNDEKTNDSITVFTGVPTMYTRLIQGYEAMDKEMQDS 297
Query: 298 SASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTV 357
SA AA++LRLMM GSSALP PVM QWE+ITGHRLLERYGMTEFVMA+SNPLRGAR AGTV
Sbjct: 298 SAFAARKLRLMMSGSSALPRPVMHQWESITGHRLLERYGMTEFVMAMSNPLRGARNAGTV 357
Query: 358 GNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTG 417
G PLPGV+ KI EDE +DA GVGEICVKSPSLFKEYW LP+VTK+SFT DG+FKTGD G
Sbjct: 358 GKPLPGVEAKIKEDE--NDANGVGEICVKSPSLFKEYWNLPEVTKESFTEDGYFKTGDAG 415
Query: 418 KQDEDGYYIILGRK 431
+ DEDGYY+ILGR
Sbjct: 416 RVDEDGYYVILGRN 429
>sp|Q4G176|ACSF3_HUMAN Acyl-CoA synthetase family member 3, mitochondrial OS=Homo sapiens
GN=ACSF3 PE=1 SV=3
Length = 576
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 243/448 (54%), Gaps = 58/448 (12%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGA-----R 70
D +A+ ++Y +L S +LR+S +C L G G R
Sbjct: 55 DRIALVDQHGRHTYRELYSRSLRLSQEICR-----------------LCGCVGGDLREER 97
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130
+ + +V +W SG +AVPL +P ++L +V+ DS S+VL++++Y E+L
Sbjct: 98 VSFLCANDASYVVAQWASWMSGGVAVPLYRKHPAAQLEYVICDSQSSVVLASQEYLELLS 157
Query: 131 NVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVH 190
V K G L+P P + + G R + A+I+YTSGTTG+PKGV+
Sbjct: 158 PVVRKLGV--PLLPLTPAIYTGAVEEPAEVPVPEQGWRNKG-AMIIYTSGTTGRPKGVLS 214
Query: 191 THKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRG 250
TH++I A V L W +T D LH LPLHHVHG+ NALL PL+ GAT MP+FS +
Sbjct: 215 THQNIRAVVTGLVHKWAWTKDDVILHVLPLHHVHGVVNALLCPLWVGATCVMMPEFSPQQ 274
Query: 251 IWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAAS---ASAAKQLRL 307
+W+++ S I F VPT+YT+L++ Y+ T+ A A +++RL
Sbjct: 275 VWEKFLSS-------ETPRINVFMAVPTIYTKLMEYYDRHFTQPHAQDFLRAVCEEKIRL 327
Query: 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGA-RKAGTVGNPLPGVQV 366
M+ GS+ALPLPV+++W+ ITGH LLERYGMTE MA+S PL A R G+VG PLPGVQV
Sbjct: 328 MVSGSAALPLPVLEKWKNITGHTLLERYGMTEIGMALSGPLTTAVRLPGSVGTPLPGVQV 387
Query: 367 KIAEDESGSDAAGV---------------------GEICVKSPSLFKEYWKLPKVTKDSF 405
+I + +A GE+ V+ PS+F+EYW P+ TK +F
Sbjct: 388 RIVSENPQREACSYTIHAEGDERGTKVTPGFEEKEGELLVRGPSVFREYWNKPEETKSAF 447
Query: 406 TADGFFKTGDTGKQDEDGYYIILGRKGI 433
T DG+FKTGDT +DG Y I GR +
Sbjct: 448 TLDGWFKTGDT-VVFKDGQYWIRGRTSV 474
>sp|Q58DN7|ACSF3_BOVIN Acyl-CoA synthetase family member 3, mitochondrial OS=Bos taurus
GN=ACSF3 PE=2 SV=1
Length = 586
Score = 281 bits (720), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 242/447 (54%), Gaps = 57/447 (12%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
D +A+ ++Y L +LR+S +C L+ ++ E R+ ++
Sbjct: 56 DRLALIDQHGRHTYKDLYLRSLRLSREIC--QLRACADGDLREE----------RVSLLC 103
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135
FV W SG +AVPL +P ++L + + DS S+VL+ ++ E+L VA K
Sbjct: 104 SNDVSFVVAQWAAWMSGGVAVPLYRKHPRAQLEYFIQDSRSSVVLAGPEHVELLSPVAQK 163
Query: 136 SGAKFSLIPPVPNVSSETTVF-----DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVH 190
G VP + TV+ D + ++ + A+I+YTSGTTG+PKGV+
Sbjct: 164 LG--------VPLLPLPPTVYHGVAEDPEEGLVLERNWRDRGAMIIYTSGTTGRPKGVLS 215
Query: 191 THKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRG 250
TH +I A V L W +T D LH LPLHHVHG+ N LL PL+ GAT +P+FS +
Sbjct: 216 THDNIRAVVTGLVHKWAWTKDDVILHVLPLHHVHGVVNKLLCPLWVGATCVMLPEFSAQL 275
Query: 251 IWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA---ASASAAKQLRL 307
+W+++ S I F VPT+Y++L+ Y+ T+ A +++RL
Sbjct: 276 VWEKFLSS-------EAPQINVFMAVPTIYSKLMDYYDKHFTQPHVQDFVRAVCEEKIRL 328
Query: 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVK 367
M+ GS+ALPLPV+++W+ ITGH LLERYGMTE MA+SNPL AR G+VG PLPGV+V+
Sbjct: 329 MVSGSAALPLPVLEKWKGITGHTLLERYGMTEIGMALSNPLTAARLPGSVGTPLPGVEVR 388
Query: 368 IAEDESGSDAAGV---------------------GEICVKSPSLFKEYWKLPKVTKDSFT 406
I + D++ GE+ V+ PS+F+EYW P+ TK +FT
Sbjct: 389 IVSENPQKDSSPYLIHAEGSEENTKVTPGFEEKEGELLVRGPSVFREYWDKPEETKAAFT 448
Query: 407 ADGFFKTGDTGKQDEDGYYIILGRKGI 433
+DG+FKTGDT +DG Y I GR +
Sbjct: 449 SDGWFKTGDT-VVFKDGCYWIRGRTSV 474
>sp|Q6GLK6|ACSF3_XENLA Acyl-CoA synthetase family member 3, mitochondrial OS=Xenopus
laevis GN=acsf3 PE=2 SV=1
Length = 578
Score = 278 bits (710), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 151/388 (38%), Positives = 221/388 (56%), Gaps = 33/388 (8%)
Query: 70 RIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129
R+ + + +V W SG IAVPL S+P SEL +V+ DS ++V++ E Y VL
Sbjct: 98 RVSFLCPNNSSYVVCQWAVWMSGAIAVPLCKSHPPSELKYVLQDSQSALVVAEESYTNVL 157
Query: 130 QNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVV 189
+A + G + N+ + + + + ++D + A+I+YTSGTTG+PKGV+
Sbjct: 158 SPLAEQLGIPVLTMSGSQNLHP-SELLQEIKISQLDLDWKDRGAMIIYTSGTTGRPKGVL 216
Query: 190 HTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVR 249
TH ++ + V L W +T D LH LPLHHVHG+ N L+ PL+ GAT +P+F +
Sbjct: 217 STHYNLYSMVTALVNEWGWTKEDSILHVLPLHHVHGVVNKLMCPLWVGATCVILPEFCPK 276
Query: 250 GIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTE---LQAASASAAKQLR 306
+WQ + R +I F VPT+Y++LI YE T + A+ +++R
Sbjct: 277 TVWQHFL-------GRDVPSINIFMAVPTIYSKLIAYYEQHFTHSNVREFVRAACQERIR 329
Query: 307 LMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQV 366
LM+ GSSALP+PV+++W+ ITGH LLERYGMTE MA++NPL G R G VG PLPGV+V
Sbjct: 330 LMVSGSSALPVPVLERWQEITGHTLLERYGMTEIGMALTNPLHGPRVPGAVGAPLPGVEV 389
Query: 367 KIAED-----------ESGSDAAGV----------GEICVKSPSLFKEYWKLPKVTKDSF 405
+ + D+ G GE+ V+ P++FKEYW T+++F
Sbjct: 390 RTVTQNPRKEGTSYTTHAQGDSTGTMVSVGLENREGELQVRGPAVFKEYWNKRLDTQEAF 449
Query: 406 TADGFFKTGDTGKQDEDGYYIILGRKGI 433
T+DG+FKTGDT +DG Y ILGR +
Sbjct: 450 TSDGWFKTGDTAMY-KDGTYWILGRTSV 476
>sp|Q3URE1|ACSF3_MOUSE Acyl-CoA synthetase family member 3, mitochondrial OS=Mus musculus
GN=Acsf3 PE=2 SV=2
Length = 583
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 219/387 (56%), Gaps = 34/387 (8%)
Query: 70 RIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129
R+ + +V +W SG +AVPL +PE++L + + DS S+V+ ++Y E L
Sbjct: 97 RVSFLCSNDVSYVVAQWASWMSGGVAVPLYWKHPEAQLEYFIQDSRSSLVVVGQEYLERL 156
Query: 130 QNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVV 189
+A + G L+P P V T Q + G R A+I YTSGTTG+PKG +
Sbjct: 157 SPLAQRLGV--PLLPLTPAVYHGATEKPTEQPVEESGWRDRG-AMIFYTSGTTGRPKGAL 213
Query: 190 HTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVR 249
TH+++ A V L +W +T D LH LPLHHVHG+ N LL PL+ GAT +P+FS +
Sbjct: 214 STHRNLAAVVTGLVHSWAWTKNDVILHVLPLHHVHGVVNKLLCPLWVGATCVMLPEFSAQ 273
Query: 250 GIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA---ASASAAKQLR 306
+W+++ S IT F VPT+Y++L+ Y+ T+ A +++R
Sbjct: 274 QVWEKFLSS-------EAPQITVFMAVPTVYSKLLDYYDKHFTQPHVQDFVRAVCKERIR 326
Query: 307 LMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQV 366
LM+ GS+ALP+P++++W + TGH LLERYGMTE MA+SNPL AR G+VG PLPGV+V
Sbjct: 327 LMVSGSAALPVPLLEKWRSATGHTLLERYGMTEIGMALSNPLTEARVPGSVGTPLPGVEV 386
Query: 367 KIAEDESGSDAAGV--------------------GEICVKSPSLFKEYWKLPKVTKDSFT 406
+I + + + GE+ V+ PS+F+EYW P+ TK +FT
Sbjct: 387 RIISENPQKGSPYIIHAEGNERGTKVTPGFEEKEGELLVRGPSVFREYWDKPEETKSAFT 446
Query: 407 ADGFFKTGDTGKQDEDGYYIILGRKGI 433
+DG+F+TGDT +D Y I GR +
Sbjct: 447 SDGWFRTGDTAV-FKDARYWIRGRTSV 472
>sp|O07610|LCFB_BACSU Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis (strain 168)
GN=lcfB PE=2 SV=2
Length = 513
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 205/435 (47%), Gaps = 57/435 (13%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
DS+A R +Y +L R + L ++ K ++ A+L G
Sbjct: 16 DSIACRFKDHMMTYQELNEYIQRFADGLQEAGME------KGDHLALLLGN--------- 60
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135
S +F+ G +G + VP+ Y +E+ +++ + D+ ++ + +++ +
Sbjct: 61 --SPDFIIAFFGALKAGIVVVPINPLYTPTEIGYMLTNGDVKAIVGVSQLLPLYESM-HE 117
Query: 136 SGAKFSLI---------PPV--PNVSSETTVFDQ-----SQAEKMDGQRGEDPALIVYTS 179
S K L+ P P V + T F + S A++ +D A+I+YTS
Sbjct: 118 SLPKVELVILCQTGEAEPEAADPEVRMKMTTFAKILRPTSAAKQNQEPVPDDTAVILYTS 177
Query: 180 GTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239
GTTGKPKG + TH+++ + + D + LP+ HV L + APL +GAT
Sbjct: 178 GTTGKPKGAMLTHQNLYSNANDVAGYLGMDERDNVVCALPMFHVFCLTVCMNAPLMSGAT 237
Query: 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299
V P+FS +++ ++ + T F GVPTMY L Q + +
Sbjct: 238 VLIEPQFSPASVFKLVKQ----------QQATIFAGVPTMYNYLFQHENGKKDDFSS--- 284
Query: 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFV-MAISNPLRGARKAGTVG 358
+RL + G +++P+ ++ +E G +LE YG++E + NP RK G++G
Sbjct: 285 -----IRLCISGGASMPVALLTAFEEKFGVTILEGYGLSEASPVTCFNPFDRGRKPGSIG 339
Query: 359 NPLPGVQVKIAEDESGSD--AAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDT 416
+ V+ K+ D G + A VGE+ VK P++ K Y+K+P T+ + DG+ TGD
Sbjct: 340 TSILHVENKVV-DPLGRELPAHQVGELIVKGPNVMKGYYKMPMETEHALK-DGWLYTGDL 397
Query: 417 GKQDEDGYYIILGRK 431
++DEDGY+ I+ RK
Sbjct: 398 ARRDEDGYFYIVDRK 412
>sp|P94547|LCFA_BACSU Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis (strain 168)
GN=lcfA PE=3 SV=1
Length = 560
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 202/455 (44%), Gaps = 79/455 (17%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
D AI K ++ + + AL++++ L N L+ K + AV+ C
Sbjct: 39 DKTAISFYGKKLTFHDILTDALKLAAFLQCNGLQ------KGDRVAVMLPNCP------- 85
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVL--------------- 120
+ V G F+G I V Y E EL + + D+ +S+++
Sbjct: 86 ----QTVISYYGVLFAGGIVVQTNPLYTEHELEYQLRDAQVSVIITLDLLFPKAIKMKTL 141
Query: 121 ---------STEDY----REVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAE----- 162
S +DY + +L + K N+ + + Q + E
Sbjct: 142 SIVDQILITSVKDYLPFPKNILYPLTQKQKVHIDF-DKTANIHTFASCMKQEKTELLTIP 200
Query: 163 KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEY---TSADQFLHCLP 219
K+D + D A++ YT GTTG PKGV+ TH++I A +M AW Y A++ L +P
Sbjct: 201 KIDPEH--DIAVLQYTGGTTGAPKGVMLTHQNILANTEMCA-AWMYDVKEGAEKVLGIVP 257
Query: 220 LHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279
HV+GL + + G + +PKF + + P T F G PT+
Sbjct: 258 FFHVYGLTAVMNYSIKLGFEMILLPKFDPLETLKIIDKHKP----------TLFPGAPTI 307
Query: 280 YTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTE 339
Y L+ ELQ S+ K + GS+ALP+ V Q++E +TG +L+E YG++E
Sbjct: 308 YIGLLH-----HPELQHYDLSSIKSC---LSGSAALPVEVKQKFEKVTGGKLVEGYGLSE 359
Query: 340 FV-MAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV--GEICVKSPSLFKEYWK 396
+ +N + G K G++G P P I +E+G AA GEI VK P + K YW
Sbjct: 360 ASPVTHANFIWGKNKPGSIGCPWPSTDAAIYSEETGELAAPYEHGEIIVKGPQVMKGYWN 419
Query: 397 LPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRK 431
P+ T + DG+ TGD G DE+G++ I RK
Sbjct: 420 KPEETA-AVLRDGWLFTGDMGYMDEEGFFYIADRK 453
>sp|Q0K844|SAUT_CUPNH Probable sulfoacetate--CoA ligase OS=Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauT PE=2
SV=1
Length = 509
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 194/420 (46%), Gaps = 35/420 (8%)
Query: 18 VAIRADQ---KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIV 74
+A+RA Q K Y + AL +L T T + A G G + +
Sbjct: 17 IAVRAAQWPDKPYLLSPDSGHALTFGAL-------ATDAGTLGRSYAAAGLGSGQTVSVY 69
Query: 75 AKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS 134
+ +LGT G + P+ L ++L +++ SD +V + D ++
Sbjct: 70 LPNGEQTARLLLGTMACGLVVNPINLLCQPAQLRYILAHSDTRLVFTWPDGEAAIREALR 129
Query: 135 KSGAKFSLIPPVPNVSSETTV-FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHK 193
++G ++ P+ +S + A + + + PAL++YTSGTTG PKGV+ T +
Sbjct: 130 EAGLDVPVLVTAPDANSLPALPATHDAASPLPPPQPDAPALLMYTSGTTGTPKGVLLTQR 189
Query: 194 SIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQ 253
++ A ++ AD+ L LPL+H++GL +APL G +V +FS WQ
Sbjct: 190 NLVANGTNVSREHCLGPADRVLATLPLYHINGLVVTAIAPLVHGGSVVMPMRFSASAFWQ 249
Query: 254 RWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313
+ A T VPT+ L+ D QA + +R S+
Sbjct: 250 ----------DSARHGCTWLNVVPTIIAYLLN-----DPHGQAPAG-----VRFCRSASA 289
Query: 314 ALPLPVMQQWETITGHRLLERYGMTEFVM-AISNPLR-GARKAGTVGNPLPGVQVKI-AE 370
ALP + +E G ++E GMTE A SNPL G R+ G++G P G + ++
Sbjct: 290 ALPPEHHRAFEARFGIGVIETMGMTETAAPAFSNPLDPGQRRIGSIGRP-SGTRARVLGR 348
Query: 371 DESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGR 430
D + VGEI ++ S+ Y+K P +T+++FT DG+ +TGD G +D DGY+ I GR
Sbjct: 349 DGKPAPDGQVGEIVLQGESVMAGYYKAPDITREAFTHDGWLRTGDLGYRDADGYFYISGR 408
>sp|O74976|FAT2_SCHPO Putative peroxisomal-coenzyme A synthetase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1827.03c PE=1
SV=1
Length = 512
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 168/383 (43%), Gaps = 37/383 (9%)
Query: 61 AVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVL 120
A L G + I EFV + I PL +Y +SE + D +V+
Sbjct: 45 ASLGIKVGDPVNIAIPNGLEFVVAFYAVSWQRAICGPLNSNYKQSEFEFYIDDLKSKLVI 104
Query: 121 STEDYREVLQNVASKSGAKFSLIPPVPNVS----SETTVFDQSQAEKMDGQRG------E 170
E V N + AK L V ++ S + K++ + +
Sbjct: 105 VPEG--SVAANTPAVRAAK-KLSVAVAELAWCPKSRLVRIVHFEGAKINAPQPLGLPQPD 161
Query: 171 DPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230
D L+++TSGTTG+PK V THK++ + +T ++ D +PL HVHGL L
Sbjct: 162 DVMLVLHTSGTTGRPKVVPLTHKNLCRSIHNITTSYRLDPRDTSYVVMPLFHVHGLLCGL 221
Query: 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290
L+ L +G PKFS W+ + + T +T VPT++ L
Sbjct: 222 LSTLASGGCAVVPPKFSAHSFWKEFIQY----------GATWYTAVPTIHQIL------- 264
Query: 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAI-SNPLR 349
L+ ++R + SS L PV+ + E +LE Y MTE + +NPL
Sbjct: 265 ---LRTPPPKPLPRIRFIRSCSSPLAPPVLSKLEATFRAPVLEAYAMTEASHQMTTNPLP 321
Query: 350 G-ARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTA 407
K +VG P GV++KI + + G GEICV+ ++ K Y P K SFT
Sbjct: 322 PLVHKPHSVGKPF-GVELKILDQKGNEMPQGKEGEICVRGINVTKGYLNNPAANKSSFTK 380
Query: 408 DGFFKTGDTGKQDEDGYYIILGR 430
D FF+TGD GK D+DGY I GR
Sbjct: 381 DRFFRTGDEGKLDKDGYVFITGR 403
>sp|O53306|FAC13_MYCTU Long-chain-fatty-acid--CoA ligase FadD13 OS=Mycobacterium
tuberculosis GN=fadD13 PE=1 SV=1
Length = 503
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 167/383 (43%), Gaps = 59/383 (15%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G R+ ++ S EF G G +AVP+ E+ ++ DS +V+
Sbjct: 54 GDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAP 113
Query: 128 VLQNVASKSGAKFSLIPPVPNVSSETTVFD----QSQAEKMDGQRGEDPAL--------- 174
V+ + +++ PP TV D S AE++ ++PA+
Sbjct: 114 VIDAIRAQAD------PP-------GTVTDWIGADSLAERLRSAAADEPAVECGGDDNLF 160
Query: 175 IVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPL 234
I+YTSGTTG PKGVVHTH+S+ + + D+ L LP+ HV L + + +
Sbjct: 161 IMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFSAM 220
Query: 235 YAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM--YTRLIQGYEAMDT 292
G T+ MP+F +W E E + VP + + R + + +D
Sbjct: 221 R-GVTLISMPQFDATKVWSLIVE----------ERVCIGGAVPAILNFMRQVPEFAELD- 268
Query: 293 ELQAASASAAKQLRLMMCGSSALPLPVMQQW-----ETITGHRLLERYGMTEFVMAISNP 347
A R + G + +P +++ + E + G+ L E G +++
Sbjct: 269 ---------APDFRYFITGGAPMPEALIKIYAAKNIEVVQGYALTESCGGGTLLLSED-- 317
Query: 348 LRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTA 407
RKAG+ G V + D+ G GE+ +KS L KEYW P+ T+D+F
Sbjct: 318 --ALRKAGSAGRATMFTDVAVRGDDGVIREHGEGEVVIKSDILLKEYWNRPEATRDAFD- 374
Query: 408 DGFFKTGDTGKQDEDGYYIILGR 430
+G+F+TGD G+ D++GY I R
Sbjct: 375 NGWFRTGDIGEIDDEGYLYIKDR 397
>sp|O30409|TYCC_BREPA Tyrocidine synthase 3 OS=Brevibacillus parabrevis GN=tycC PE=1 SV=1
Length = 6486
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 193/436 (44%), Gaps = 76/436 (17%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
D A+ ++S +Y +L A R++ +L + + G + I+A
Sbjct: 5671 DQAALLFSEQSLTYSELNERANRLARVLRAKGV-----------------GPDRLVAIMA 5713
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135
+ S E V G+LG +G VP+ YP+ + +++ DS+ +++LS
Sbjct: 5714 ERSPEMVIGILGILKAGGAYVPVDPGYPQERIQYLLEDSNAALLLS-------------- 5759
Query: 136 SGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGE---------DPALIVYTSGTTGKPK 186
+ L+P + VSSE AE G G D A ++YTSGTTGKPK
Sbjct: 5760 ---QAHLLPLLAQVSSELPECLDLNAELDAGLSGSNLPAVNQPTDLAYVIYTSGTTGKPK 5816
Query: 187 GVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF 246
GV+ H+ I +Q + + + +D+ L G +L APL GAT +P+
Sbjct: 5817 GVMIPHQGIVNCLQWRRDEYGFGPSDKALQVFSF-AFDGFVASLFAPLLGGATC-VLPQE 5874
Query: 247 SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLR 306
+ ++ + A +T + GVP+++ + L ++ + QLR
Sbjct: 5875 AAA------KDPVALKKLMAATEVTHYYGVPSLFQAI----------LDCSTTTDFNQLR 5918
Query: 307 LMMCGSSALPLPVMQQWETITGHRLLE---RYGMTE--FVMAISNPLRGARKAGTVGNPL 361
+ G LP+ ++Q+ T H +E YG TE V IS + A +A T+G PL
Sbjct: 5919 CVTLGGEKLPVQLVQK--TKEKHPAIEINNEYGPTENSVVTTISRSIE-AGQAITIGRPL 5975
Query: 362 PGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTG 414
VQV I +++ G VGE+C+ L + Y P++T + F A+ F +KTG
Sbjct: 5976 ANVQVYIVDEQHHLQPIGVVGELCIGGAGLARGYLNKPELTAEKFVANPFRPGERMYKTG 6035
Query: 415 DTGKQDEDGYYIILGR 430
D K DG +GR
Sbjct: 6036 DLVKWRTDGTIEYIGR 6051
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 180/426 (42%), Gaps = 59/426 (13%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
D VA+ ++ + +Y +L + A +++ LL S+ G IGI+
Sbjct: 1515 DEVAVVYEEYALTYRELNARANQLARLLRSH-----------------GTGPDTLIGIMV 1557
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135
S V G+L +G P+ SYP + +++ DS ++L+ LQ +A+
Sbjct: 1558 DRSPGMVVGMLAVLKAGGAYTPIDPSYPPERIQYMLSDSQAPILLTQRH----LQELAAY 1613
Query: 136 SGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDP-ALIVYTSGTTGKPKGVVHTHKS 194
G + E ++ + +D G+D A ++YTSG+TG PKGV+ +H++
Sbjct: 1614 QGEIIDV--------DEEAIYTGADT-NLDNVAGKDDLAYVIYTSGSTGNPKGVMISHQA 1664
Query: 195 IDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQR 254
I + + E + T+ D L P ++ L PL G + R I
Sbjct: 1665 ICNHMLWMRETFPLTTEDAVLQKTPFSFDASVWEFYL-PLITGGQLVLAKPDGHRDI--- 1720
Query: 255 WRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314
+Y R E IT VP++ +D + SA L+ + CG A
Sbjct: 1721 ---AYMTRLIR-DEKITTLQMVPSL----------LDLVMTDPGWSACTSLQRVFCGGEA 1766
Query: 315 LPLPVMQQWETITGHRLLERYGMTEFVMAISN---PLRGARKAGTVGNPLPGVQVKIAED 371
L ++ ++ +L+ YG TE + + P + A +G P+ V++ +
Sbjct: 1767 LTPALVSRFYETQQAQLINLYGPTETTIDATYWPCPRQQEYSAIPIGKPIDNVRLYVVNA 1826
Query: 372 ESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDGY 424
+ GV GE+C+ L + YW+ ++TK SF + F ++TGD + DG+
Sbjct: 1827 SNQLQPVGVAGELCIAGDGLARGYWQREELTKASFVDNPFEPGGTMYRTGDMVRYLPDGH 1886
Query: 425 YIILGR 430
LGR
Sbjct: 1887 IEYLGR 1892
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 166/396 (41%), Gaps = 56/396 (14%)
Query: 57 NENSAVLAGGCGAR-------IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLH 109
NE + LA R +GI+A S E V G+L +G VP+ YPE + +
Sbjct: 2569 NERANQLAATLRERGVQPDQPVGIMANRSVEMVVGILAILKAGGAYVPIDPEYPEERVAY 2628
Query: 110 VMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQS------QAEK 163
++ D +VL+ +++ +K G+ +V++E D ++
Sbjct: 2629 MLTDCQARLVLTQ-------KHLGAKLGS---------SVTAECLYLDDESNYGVHRSNL 2672
Query: 164 MDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHV 223
D A I+YTSGTTGKPKGV+ H+ I V ++ D+ L L
Sbjct: 2673 QPINTASDLAYIIYTSGTTGKPKGVMVEHRGIVNNVLWKKAEYQMKVGDRSLLSLSF-AF 2731
Query: 224 HGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283
+ P+ +GATV V + ++ + A T TGVP+++ +
Sbjct: 2732 DAFVLSFFTPVLSGATV-------VLAEDEEAKDPVSLKKLIAASRCTLMTGVPSLFQAI 2784
Query: 284 IQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHR-LLERYGMTE-FV 341
L+ ++ + + L+ + G + ++++ + + ++ YG TE V
Sbjct: 2785 ----------LECSTPADIRPLQTVTLGGEKITAQLVEKCKQLNPDLVIVNEYGPTESSV 2834
Query: 342 MAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKV 400
+A L G A T+G P+ + I G VGEIC+ L + YW P +
Sbjct: 2835 VATWQRLAGPDAAITIGRPIANTSLYIVNQYHQLQPIGVVGEICIGGRGLARGYWNKPAL 2894
Query: 401 TKDSFTADGF------FKTGDTGKQDEDGYYIILGR 430
T++ F + F +KTGD GK DG +GR
Sbjct: 2895 TEEKFVSHPFAAGERMYKTGDLGKWLPDGTIEYIGR 2930
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 182/445 (40%), Gaps = 88/445 (19%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
+ +A+ + +Y +L + A +++ +L +K S +GI+
Sbjct: 4625 NEIAVLFGNEQLTYQELNAKANQLARVLRRKGVKPES-----------------TVGILV 4667
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135
S V G+L +G VP+ YP ++ DS+ ++L+ LQ + S+
Sbjct: 4668 DRSLYMVIGMLAVLKAGGTFVPIDPDYPLERQAFMLEDSEAKLLLT-------LQKMNSQ 4720
Query: 136 SGAKFSLIPPVPNVSSETTVFDQSQAEKMDG-QRGEDPALIVYTSGTTGKPKGVVHTHKS 194
P +T DQ + ++ + E+ A I+YTSGTTGKPKGVV H+S
Sbjct: 4721 VAF------PYETFYLDTETVDQEETGNLEHVAQPENVAYIIYTSGTTGKPKGVVIEHRS 4774
Query: 195 IDAQVQMLTEAWEYTSADQF-LHCLP---LHHVHGLFNA----LLAPLYAGATVEFMP-- 244
A V AW+ D++ L P L F+ L G + P
Sbjct: 4775 Y-ANVAF---AWK----DEYHLDSFPVRLLQMASFAFDVSTGDFARALLTGGQLVICPNG 4826
Query: 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK 303
K +++ R IT F P + L+ + + EL +
Sbjct: 4827 VKMDPASLYETIRR----------HEITIFEATPALIMPLM--HYVYENELDMS------ 4868
Query: 304 QLRLMMCGSSALPLPVMQQWETITGH-----RLLERYGMTEFVMAIS---NPLRGARKAG 355
Q++L++ G+ + P + ++T+ R++ YG+TE + S A ++G
Sbjct: 4869 QMKLLILGADSCP---AEDFKTLLARFGQKMRIINSYGVTEACIDTSYYEETDVTAIRSG 4925
Query: 356 TV--GNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGF-- 410
TV G PLP + + + + G VGE+C+ + + Y P++T++ F + F
Sbjct: 4926 TVPIGKPLPNMTMYVVDAHLNLQPVGVVGELCIGGAGVARGYLNRPELTEEKFVPNPFAP 4985
Query: 411 ----FKTGDTGKQDEDGYYIILGRK 431
++TGD K DG LGR
Sbjct: 4986 GERLYRTGDLAKWRADGNVEFLGRN 5010
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 171/414 (41%), Gaps = 62/414 (14%)
Query: 40 SSLLCSNDLKTTSEKTKNENSAVLAGGC-------GARIGIVAKPSFEFVAGVLGTWFSG 92
++++C D T E E SA LA G+ + I+A+ S E + ++ SG
Sbjct: 481 AAVVCGEDTLTYQELM--ERSAQLANALREKGIASGSIVSIMAEHSLELIVAIMAVLRSG 538
Query: 93 CIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSE 152
+P+ YP+ + +++ DS +++L+ LQ +G+ L +
Sbjct: 539 AAYLPIDPEYPQDRIQYLLDDSQTTLLLTQSH----LQPNIRFAGSVLYL--------DD 586
Query: 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSAD 212
++++ + +D A ++YTSG+TG PKG + TH+ + + + + A
Sbjct: 587 RSLYEGGSTSFAPESKPDDLAYMIYTSGSTGNPKGAMITHQGLVNYIWWANKVYVQGEAV 646
Query: 213 QFLHCLPLHHVHGL---FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEA 269
F PL+ ++ PL +G T+ RG + + N+ G
Sbjct: 647 DF----PLYSSISFDLTVTSIFTPLLSGNTIHVY-----RGADKVQVILDIIKDNKVG-- 695
Query: 270 ITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH 329
I T PT + +LI+ + A +R + G LP + +Q G
Sbjct: 696 IIKLT--PT-HLKLIEHIDG-----------KASSIRRFIVGGENLPTKLAKQIYDHFGE 741
Query: 330 --RLLERYGMTEFVMA----ISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGE 382
++ YG TE V+ + +P +++ +G P VQ+ + + G +GE
Sbjct: 742 NVQIFNEYGPTETVVGCMIYLYDPQTTTQESVPIGVPADNVQLYLLDASMQPVPVGSLGE 801
Query: 383 ICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDGYYIILGR 430
+ + + K Y+ P++TK+ F + F ++TGD K DG GR
Sbjct: 802 MYIAGDGVAKGYFNRPELTKEKFIDNPFRPGTKMYRTGDLAKWLPDGNMEYAGR 855
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 158/398 (39%), Gaps = 52/398 (13%)
Query: 49 KTTSEKTKNENSAVLAGGCGAR--IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESE 106
+ +EK + G G +G++A S E + G++G +G + L +P
Sbjct: 3604 RELNEKANQLAHVLRQNGVGKESIVGLLADRSLEMITGIMGILKAGGAYLGLDPEHPSER 3663
Query: 107 LLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDG 166
L +++ D + +VL V +++ G +P V E ++ +
Sbjct: 3664 LAYMLEDGGVKVVL-------VQKHLLPLVGEGL-----MPIVLEEESLRPEDCGNPAIV 3711
Query: 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226
D A ++YTSG+TGKPKGV+ H+++ ++ M T + +D+ + +
Sbjct: 3712 NGASDLAYVMYTSGSTGKPKGVMVEHRNV-TRLVMHTNYVQVRESDRMIQTGAIGFDAMT 3770
Query: 227 FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGE-----AITAFTGVPTMYT 281
F + L GA++ + K + ++ + G+ IT ++
Sbjct: 3771 FE-IFGALLHGASLYLVSKDVL------------LDAEKLGDFLRTNQITTMWLTSPLFN 3817
Query: 282 RLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFV 341
+L Q AM L+A L++ G + P + + + + YG TE
Sbjct: 3818 QLSQDNPAMFDSLRA----------LIVGGEALSPKHINRVKSALPDLEIWNGYGPTENT 3867
Query: 342 MAISNPL--RGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLP 398
+ L + + +G P+ I + + GV GE+CV + + Y P
Sbjct: 3868 TFSTCYLIEQHFEEQIPIGKPIANSTAYIVDGNNQPQPIGVPGELCVGGDGVARGYVNKP 3927
Query: 399 KVTKDSFTADGF------FKTGDTGKQDEDGYYIILGR 430
++T + F + F ++TGD + DG LGR
Sbjct: 3928 ELTAEKFVPNPFAPGETMYRTGDLARWLPDGTIEYLGR 3965
>sp|P63521|LCFA_SALTY Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=fadD PE=3 SV=1
Length = 561
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 173/400 (43%), Gaps = 55/400 (13%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G R+ ++ ++ + G +G I V + Y EL H ++DS + ++ ++
Sbjct: 74 GDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAAAIIIVSNFAH 133
Query: 128 VLQNVASKSGAKFSLIPPVPN--VSSETTVFD-------------------QSQAEKMDG 166
L+ V K+ + ++ + + +++ TV + ++ G
Sbjct: 134 TLEKVVEKTSVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAISFRSALQHG 193
Query: 167 QR---------GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---YTSADQF 214
R ED A + YT GTTG KG + TH+++ A ++ + + + +
Sbjct: 194 YRMQYVKPEVVAEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKATYGPLLHPGKELV 253
Query: 215 LHCLPLHHVHGL-FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273
+ LPL+H+ L N LL G + + G+ + + YP TA
Sbjct: 254 VTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGLVKELAK-YP---------FTAM 303
Query: 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLE 333
TGV T++ L+ E + + SA G + V ++W +TG LLE
Sbjct: 304 TGVNTLFNALLNNKEFQQLDFSSLHLSAG--------GGMPVQNVVAERWVKLTGQYLLE 355
Query: 334 RYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLF 391
YG+TE +S NP +G++G P+P + K+ +D+ A G GE+CVK P +
Sbjct: 356 GYGLTECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAPGEAGELCVKGPQVM 415
Query: 392 KEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRK 431
YW+ P T D DG+ TGD DEDG+ I+ RK
Sbjct: 416 LGYWQRPDAT-DEIIKDGWLHTGDIAVMDEDGFLRIVDRK 454
>sp|P63522|LCFA_SALTI Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3
SV=1
Length = 561
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 173/400 (43%), Gaps = 55/400 (13%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G R+ ++ ++ + G +G I V + Y EL H ++DS + ++ ++
Sbjct: 74 GDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAAAIIIVSNFAH 133
Query: 128 VLQNVASKSGAKFSLIPPVPN--VSSETTVFD-------------------QSQAEKMDG 166
L+ V K+ + ++ + + +++ TV + ++ G
Sbjct: 134 TLEKVVEKTSVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAISFRSALQHG 193
Query: 167 QR---------GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---YTSADQF 214
R ED A + YT GTTG KG + TH+++ A ++ + + + +
Sbjct: 194 YRMQYVKPEVVAEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKATYGPLLHPGKELV 253
Query: 215 LHCLPLHHVHGL-FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273
+ LPL+H+ L N LL G + + G+ + + YP TA
Sbjct: 254 VTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGLVKELAK-YP---------FTAM 303
Query: 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLE 333
TGV T++ L+ E + + SA G + V ++W +TG LLE
Sbjct: 304 TGVNTLFNALLNNKEFQQLDFSSLHLSAG--------GGMPVQNVVAERWVKLTGQYLLE 355
Query: 334 RYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLF 391
YG+TE +S NP +G++G P+P + K+ +D+ A G GE+CVK P +
Sbjct: 356 GYGLTECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAPGEAGELCVKGPQVM 415
Query: 392 KEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRK 431
YW+ P T D DG+ TGD DEDG+ I+ RK
Sbjct: 416 LGYWQRPDAT-DEIIKDGWLHTGDIAVMDEDGFLRIVDRK 454
>sp|Q8ZES9|LCFA_YERPE Long-chain-fatty-acid--CoA ligase OS=Yersinia pestis GN=fadD PE=3
SV=1
Length = 562
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 171/402 (42%), Gaps = 59/402 (14%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G R+ ++ ++ + G +G I V + Y EL H + DS ++ ++
Sbjct: 74 GDRVALMMPNLLQYPIALFGVLRAGMIVVNVNPLYTPRELEHQLSDSGAVAIVIVSNFAH 133
Query: 128 VLQNVASK---------------SGAKFSLIPPV-------------PNVSSETTVFDQS 159
L+ V K S AK +L+ V P+ S TV +
Sbjct: 134 TLEKVVFKTQVRHVILTRMGDQLSAAKGTLVNFVVKYIKRLVPKYYLPDAISFRTVLQKG 193
Query: 160 QAEKMDGQRGE----DPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---YTSAD 212
+ +M + + D A + YT GTTG KG + TH+++ + ++ A+ D
Sbjct: 194 R--RMQYVKPDVINTDTAFLQYTGGTTGVAKGAILTHRNMQSNLEQAKAAYAPLLQPGRD 251
Query: 213 QFLHCLPLHHVHGL-FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAIT 271
+ LPL+H+ L N LL G ++ + G+ + YP T
Sbjct: 252 LVVTALPLYHIFALTVNCLLFIELGGRSLLITNPRDIPGMVKEL-SRYP---------FT 301
Query: 272 AFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRL 331
A TGV T++ L+ E + LRL + G + V ++WET+TG L
Sbjct: 302 AITGVNTLFNALLNNEEFTHLDFST--------LRLSVGGGMPVQKAVAEKWETLTGKHL 353
Query: 332 LERYGMTEFV-MAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPS 389
LE YG+TE + NP +G++G P+P V++ +D+ G GE+ V+ P
Sbjct: 354 LEGYGLTECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLRDDDGNDVELGKPGELWVRGPQ 413
Query: 390 LFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRK 431
+ YW+ P T D DG+ TGD DEDG+ I+ RK
Sbjct: 414 VMLGYWQRPDATDDVL-KDGWLATGDIATMDEDGFLRIVDRK 454
>sp|P69451|LCFA_ECOLI Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12)
GN=fadD PE=1 SV=1
Length = 561
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 173/400 (43%), Gaps = 55/400 (13%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G R+ ++ ++ + G +G I V + Y EL H ++DS S ++ ++
Sbjct: 74 GDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAH 133
Query: 128 VLQNVASKSGAKF--------------------------SLIPP--VPN-VSSETTVFDQ 158
L+ V K+ + L+P +P+ +S + + +
Sbjct: 134 TLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNG 193
Query: 159 SQAEKMDGQR-GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---YTSADQF 214
+ + + + ED A + YT GTTG KG + TH+++ A ++ + + + +
Sbjct: 194 YRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELV 253
Query: 215 LHCLPLHHVHGL-FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273
+ LPL+H+ L N LL G + + G+ + + YP TA
Sbjct: 254 VTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAK-YP---------FTAI 303
Query: 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLE 333
TGV T++ L+ E + + SA G + V ++W +TG LLE
Sbjct: 304 TGVNTLFNALLNNKEFQQLDFSSLHLSAG--------GGMPVQQVVAERWVKLTGQYLLE 355
Query: 334 RYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLF 391
YG+TE +S NP +G++G P+P + K+ +D+ G GE+CVK P +
Sbjct: 356 GYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVM 415
Query: 392 KEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRK 431
YW+ P T D +G+ TGD DE+G+ I+ RK
Sbjct: 416 LGYWQRPDAT-DEIIKNGWLHTGDIAVMDEEGFLRIVDRK 454
>sp|P69452|LCFA_ECOL6 Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=fadD PE=3 SV=1
Length = 561
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 173/400 (43%), Gaps = 55/400 (13%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G R+ ++ ++ + G +G I V + Y EL H ++DS S ++ ++
Sbjct: 74 GDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAH 133
Query: 128 VLQNVASKSGAKF--------------------------SLIPP--VPN-VSSETTVFDQ 158
L+ V K+ + L+P +P+ +S + + +
Sbjct: 134 TLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNG 193
Query: 159 SQAEKMDGQR-GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---YTSADQF 214
+ + + + ED A + YT GTTG KG + TH+++ A ++ + + + +
Sbjct: 194 YRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELV 253
Query: 215 LHCLPLHHVHGL-FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273
+ LPL+H+ L N LL G + + G+ + + YP TA
Sbjct: 254 VTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAK-YP---------FTAI 303
Query: 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLE 333
TGV T++ L+ E + + SA G + V ++W +TG LLE
Sbjct: 304 TGVNTLFNALLNNKEFQQLDFSSLHLSAG--------GGMPVQQVVAERWVKLTGQYLLE 355
Query: 334 RYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLF 391
YG+TE +S NP +G++G P+P + K+ +D+ G GE+CVK P +
Sbjct: 356 GYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVM 415
Query: 392 KEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRK 431
YW+ P T D +G+ TGD DE+G+ I+ RK
Sbjct: 416 LGYWQRPDAT-DEIIKNGWLHTGDIAVMDEEGFLRIVDRK 454
>sp|Q8XDR6|LCFA_ECO57 Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7
GN=fadD PE=3 SV=1
Length = 561
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 174/400 (43%), Gaps = 55/400 (13%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G R+ ++ ++ + G +G I V + Y EL H ++DS S ++ ++
Sbjct: 74 GDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAH 133
Query: 128 VLQNVASKSGAKF--------------------------SLIPP--VPN-VSSETTVFDQ 158
L+ V K+ + L+P +P+ +S + + +
Sbjct: 134 TLEKVVDKTAVQHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHNG 193
Query: 159 SQAEKMDGQR-GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---YTSADQF 214
+ + + + ED A + YT GTTG KG + TH+++ A ++ + + + +
Sbjct: 194 YRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELV 253
Query: 215 LHCLPLHHVHGL-FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273
+ LPL+H+ L N LL G + + G+ + + YP TA
Sbjct: 254 VTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAK-YP---------FTAI 303
Query: 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLE 333
TGV T++ L+ E + + SA G + V ++W +TG LLE
Sbjct: 304 TGVNTLFNALLNNKEFQQLDFSSLHLSAG--------GGMPVQQVVAERWVKLTGQYLLE 355
Query: 334 RYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLF 391
YG+TE +S NP +G++G P+P + K+ +D+ + G GE+CV+ P +
Sbjct: 356 GYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVSPGQPGELCVRGPQVM 415
Query: 392 KEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRK 431
YW+ P T D +G+ TGD DE+G+ I+ RK
Sbjct: 416 LGYWQRPDAT-DEIIKNGWLHTGDIAVMDEEGFLRIVDRK 454
>sp|B5XUP2|AAS_KLEP3 Bifunctional protein aas OS=Klebsiella pneumoniae (strain 342)
GN=aas PE=3 SV=1
Length = 719
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 128/281 (45%), Gaps = 47/281 (16%)
Query: 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226
Q+ ED A+I++TSG+ G PKGVVH+HKS+ A V+ + ++T+ D+F+ LPL H GL
Sbjct: 362 QQPEDAAMILFTSGSEGNPKGVVHSHKSLLANVEQIKTIADFTANDRFMSALPLFHSFGL 421
Query: 227 FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAI-----TAFTGVPTM-- 279
LL PL+ GA V P P++ E + T G T
Sbjct: 422 TVGLLTPLFTGAEVFLYPS--------------PLHYRVVPELVYDRNCTVLFGTSTFLA 467
Query: 280 -YTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMT 338
Y R Y+ +LR ++ G+ L Q W+ G R+LE YG+T
Sbjct: 468 NYARFANPYDFY-------------RLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVT 514
Query: 339 EFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKL- 397
E +S + A K GTVG LPG+ ++ G + +K P++ K Y ++
Sbjct: 515 ECAPVVSINVPMAAKVGTVGRILPGMDARLLAMPGIEQG---GRLQLKGPNIMKGYLRVE 571
Query: 398 -PKVTKDSFTAD-------GFFKTGDTGKQDEDGYYIILGR 430
P V + + G++ TGD DE GY I GR
Sbjct: 572 NPGVLEAPAAENQHGEKEAGWYDTGDIVTFDEQGYVRIQGR 612
>sp|Q9SMT7|4CLLA_ARATH 4-coumarate--CoA ligase-like 10 OS=Arabidopsis thaliana GN=4CLL10
PE=2 SV=1
Length = 514
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 181/385 (47%), Gaps = 39/385 (10%)
Query: 63 LAGGCGARIGIVAKPSF----EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISM 118
L G + G V +F EFV L + A PL +Y E + DSD +
Sbjct: 47 LVSDAGIKPGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSDSKL 106
Query: 119 VLSTEDYREVLQNVASK---SGAKFSLIPP----VPNVSSETTVFDQSQAEKMDGQRGED 171
+L++++ Q ASK S +L+ V +V+ +V D S E ++ +D
Sbjct: 107 LLTSKEGNAPAQEAASKLKISHVTATLLDAGSDLVLSVADSDSVVD-SATELVN--HPDD 163
Query: 172 PALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231
AL ++TSGTT +PKGV T ++ + V+ + ++ T +D + LPL HVHGL LL
Sbjct: 164 GALFLHTSGTTSRPKGVPLTQLNLASSVKNIKAVYKLTESDSTVIVLPLFHVHGLLAGLL 223
Query: 232 APLYAGATVEFMP---KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288
+ L AGA V +P +FS W ++ T +T VPT++ ++I
Sbjct: 224 SSLGAGAAVT-LPAAGRFSATTFWPDMKKY----------NATWYTAVPTIH-QIILDRH 271
Query: 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFV-MAISNP 347
A E + +LR + S++L ++ + E G +LE Y MTE + SNP
Sbjct: 272 ASHPETEYP------KLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNP 325
Query: 348 L--RGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSF 405
L G K G+VG P+ + E + GE+C++ P++ K Y P+ K F
Sbjct: 326 LPEEGPHKPGSVGKPVGQEMAILNEKGEIQEPNNKGEVCIRGPNVTKGYKNNPEANKAGF 385
Query: 406 TADGFFKTGDTGKQDEDGYYIILGR 430
G+F TGD G D DGY ++GR
Sbjct: 386 EF-GWFHTGDIGYFDTDGYLHLVGR 409
>sp|Q9AJS8|3HBCL_THAAR 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase OS=Thauera
aromatica GN=hcl PE=1 SV=1
Length = 523
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 173/405 (42%), Gaps = 33/405 (8%)
Query: 40 SSLLCSNDLKTTSE---KTKNENSAVLAGGCGA--RIGIVAKPSFEFVAGVLGTWFSGCI 94
+++LC+ T E T +A+ A G G R+ + S E VA LGT G +
Sbjct: 30 TAMLCAERSITYRELDAATNRHGNALRAHGVGKGDRVLFLMDDSPELVAAYLGTLRIGAV 89
Query: 95 AVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLI-----PPVPNV 149
AV L + ++L+V+ DS ++ ++ + Q +A + ++ P P +
Sbjct: 90 AVALNVRLAPRDVLYVIQDSACRLLYIDAEFLHLYQQIAGELEQPPQVVVRGDEAPAPAI 149
Query: 150 SSETTVFDQSQAEKMDGQRG-EDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEY 208
+ D A Q +D A +Y+SGTTG+PK V+H H+S+ ++ E +
Sbjct: 150 IAFKHFLDGQAATLESVQVAPDDVAYWLYSSGTTGRPKAVMHAHRSVLIADRLEREYFGI 209
Query: 209 TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGE 268
D+ + L ++L+ L GATV P W ++ V A
Sbjct: 210 KPGDRVFTTSKMFFGWSLGHSLMGGLQCGATVIVAPG---------WPDAERVMATAARH 260
Query: 269 AITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG 328
T P MY L++ A ++A + +R + LP + QQW G
Sbjct: 261 RPTILFSTPVMYRNLLRE--------GAGESAAMRDIRHFVSAGEKLPENIGQQWLDTFG 312
Query: 329 HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAA---GVGEICV 385
+ E G +E V A + G+ G +P +V++ DE G++ G I +
Sbjct: 313 IPITEGIGASETVFLFLCARPDAYRIGSCGKRVPWAEVRLL-DELGNEITTPDTPGLIAI 371
Query: 386 KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGR 430
+ S F YWKLP+ T+ + DG++ GD D DG++ GR
Sbjct: 372 RMASQFVGYWKLPETTEKALR-DGWYYPGDMFSFDADGFWYHNGR 415
>sp|P96575|YDAB_BACSU Putative acyl--CoA ligase YdaB OS=Bacillus subtilis (strain 168)
GN=ydaB PE=3 SV=2
Length = 503
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 174/393 (44%), Gaps = 56/393 (14%)
Query: 60 SAVLAGGC--GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDIS 117
+A+L G G R+ ++ K + G + VP++ E+ ++ S+
Sbjct: 42 NAMLQKGIQKGDRVALLCKNGHPASTVMFAALEIGAVVVPVSWQLKPYEMTGILKASEPK 101
Query: 118 MVLSTEDYREVLQNV---------------ASKSGAKFSLIPPVPNVSSETTVFDQSQAE 162
+ +++E+L V A ++ A+F + P+ ET +
Sbjct: 102 AMFYGAEFKEILDEVLPELSSLCVTMETGTAYETSAEFEALFAGPDHLPETEMVSP---- 157
Query: 163 KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHH 222
+D AL+++TSGTTG PK + TH I V+ + +FL C P++H
Sbjct: 158 -------DDTALLMFTSGTTGNPKRCMITHGGIYRYVKKSNSSIARMKGLRFLACHPIYH 210
Query: 223 VHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRA--GEAITAFTGVPTMY 280
L +L +A T F ++ PV+ + E I +P Y
Sbjct: 211 TSALICIMLG-TFAETTFVFT------------KDQDPVHMLKVIEEEKIQTVMALPVFY 257
Query: 281 TRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTE- 339
T L++ +E T+L + L ++M G + +P ++ ++ I G L YG TE
Sbjct: 258 TYLLEAWEKHQTDLSS--------LVILMTGGTKVPSSLISRYLDI-GIPLAHGYGSTEA 308
Query: 340 FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSD--AAGVGEICVKSPSLFKEYWKL 397
+ ++ P G KA + G P+ GV+VK+ + +G + +GEI V +P LFK Y
Sbjct: 309 WGISTWTPDMGMDKAASAGKPVAGVKVKVEDPLTGEELPQGEIGEIVVHTPFLFKGYEDN 368
Query: 398 PKVTKDSFTADGFFKTGDTGKQDEDGYYIILGR 430
P+ T +G+F+TGD+G DEDG+ I GR
Sbjct: 369 PEATAKVL-QNGWFRTGDSGYVDEDGFIFITGR 400
>sp|P94459|PPSD_BACSU Plipastatin synthase subunit D OS=Bacillus subtilis (strain 168)
GN=ppsD PE=1 SV=2
Length = 3603
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 178/427 (41%), Gaps = 66/427 (15%)
Query: 29 YDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGAR-------IGIVAKPSFEF 81
++Q A+ + S+L+ + KT + + +E S +A +R +GI+ SF
Sbjct: 2539 FEQQAARTPKASALVSGD--KTLTYQELDEWSNGIARALRSRGVKPDTPVGIMMHRSFSM 2596
Query: 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE--------DYREVLQNVA 133
+A +LG W +G VP+ YP+ +++ DS ++++ D+ + +
Sbjct: 2597 IASILGVWKAGGCYVPIDPEYPKERKRYILSDSGTKLLMTINEADLGVLADFEGEILTIE 2656
Query: 134 SKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHK 193
S S P+P +SS + A I+YTSGTTG+PKGV+ HK
Sbjct: 2657 SVEEDDKS---PLPQMSSAHHL-----------------AYIIYTSGTTGRPKGVMVEHK 2696
Query: 194 SIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQ 253
I +Q A+ + D L G ++ PL +GA + + + I
Sbjct: 2697 GIANTLQWRRNAYAFNETDTILQLFSF-SFDGFITSMFTPLLSGAKAVLLHEEEAKDI-- 2753
Query: 254 RWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313
+ + + IT VP +Y L+ + D K LR++
Sbjct: 2754 -----LAIKHQLSRQRITHMIIVPVLYRALLDVVQPED----------VKTLRVVTLAGE 2798
Query: 314 ALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRGARKAG--TVGNPLPGVQVKIAE 370
A ++ + I H L YG TE +A + +R K ++G P+ G QV I
Sbjct: 2799 AADRELIARSLAICPHTELANEYGPTENSVA-TTVMRHMEKQAYVSIGQPIDGTQVLILN 2857
Query: 371 DESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDG 423
GV GE+C+ L + Y LP++T+ +FT + F ++TGD + DG
Sbjct: 2858 SNHQLQPIGVAGELCIAGTGLARGYVNLPELTERAFTQNPFKPEARMYRTGDAARWMADG 2917
Query: 424 YYIILGR 430
LGR
Sbjct: 2918 TLEYLGR 2924
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 50/376 (13%)
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130
+ I+ + S F+ GVLG +G VP+ YP + +++HD S V+S L+
Sbjct: 516 VAIMMERSAAFITGVLGILKAGGAIVPVDPHYPADRIRYILHDCGCSHVVSQAHLPSSLE 575
Query: 131 NVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVH 190
+ + + P ++ S+ D S + ++ +D ++YTSGTTGKPKGV
Sbjct: 576 D-------NYIITHP-EDIESKV---DGSNIKSVNN--ADDLLYMIYTSGTTGKPKGVQF 622
Query: 191 THKSIDAQVQMLTEAWEYT------SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244
H+++ ++ +EYT AD P V + + + L G T+ +P
Sbjct: 623 EHRNMANLLK-----FEYTHSGIDFEADVLQFATPSFDV--CYQEIFSALLKGGTLHIVP 675
Query: 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304
+ R + Q + +N ++ T +PT + ++I + EL + K
Sbjct: 676 EAIKRDVPQLFAF---INKHQ-----TNIVFLPTAFIKMIFS----ERELANSFPDGVKH 723
Query: 305 LRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAIS---NPLRGARKAGTVGNPL 361
L+ G + + Q G L YG +E + + +P + +G P+
Sbjct: 724 --LIAAGEQLMISDLFQDVLRKRGIHLHNHYGPSETHVVSTYTIHPGDPIPELPPIGKPI 781
Query: 362 PGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTG 414
+ I + GV GE+ + S+ + Y K+T D F++D F ++TG
Sbjct: 782 GCTDLYILNHQKQLQPCGVPGELYISGASVARGYVNHDKLTSDKFSSDPFKPDVIMYRTG 841
Query: 415 DTGKQDEDGYYIILGR 430
D ++ EDG +GR
Sbjct: 842 DLARRLEDGNIEYIGR 857
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 150/380 (39%), Gaps = 54/380 (14%)
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130
+ I+ K S E + G+ G +G +P+ YPE + ++ DS +++L LQ
Sbjct: 1547 VAIIGKRSPEMLLGIYGILKAGGAYLPIDPDYPEERISFLLEDSGTNILL--------LQ 1598
Query: 131 NVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDP---------ALIVYTSGT 181
+ VP + E +Q+ + R +P A ++YTSG+
Sbjct: 1599 SAGLH----------VPEFTGEIVYLNQTNSGL--AHRLSNPNVDVLPQSLAYVIYTSGS 1646
Query: 182 TGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241
TG PKGV H+S + L ++ +D +H ++ P YAGA+V
Sbjct: 1647 TGMPKGVEIEHRSAVNFLNSLQSRYQLKHSDMIMHKTSYSFDASIWELFWWP-YAGASVY 1705
Query: 242 FMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301
+P+ +E + + ITA VP+M ++ + ++
Sbjct: 1706 LLPQGG-------EKEPEVIAKAIEEQKITAMHFVPSMLHAFLEHIKYRSVPIK------ 1752
Query: 302 AKQLRLMMCGSSALPLPVMQQ-WETITGHRLLERYGMTEFVMA---ISNPLRGARKAGTV 357
+L+ + G L ++ + +E + + YG TE + P + +
Sbjct: 1753 TNRLKRVFSGGEQLGTHLVSRFYELLPNVSITNSYGPTEATVEAAFFDCPPHEKLERIPI 1812
Query: 358 GNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGF------ 410
G P+ V++ + G +GE+ + + + Y P +T++ F D F
Sbjct: 1813 GKPVHHVRLYLLNQNQRMLPVGCIGELYIAGAGVARGYLNRPALTEERFLEDPFYPGERM 1872
Query: 411 FKTGDTGKQDEDGYYIILGR 430
+KTGD + DG LGR
Sbjct: 1873 YKTGDVARWLPDGNVEFLGR 1892
>sp|Q8GQN9|BCLA_THAAR Benzoate--CoA ligase OS=Thauera aromatica GN=bclA PE=1 SV=1
Length = 527
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 177/417 (42%), Gaps = 47/417 (11%)
Query: 23 DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV 82
D SY+YD+LA LR++ C + L+TT + R+ + +F
Sbjct: 46 DAGSYTYDELA---LRVNR--CGSALRTTLGLQPKD-----------RVLVCVLDGIDFP 89
Query: 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSL 142
LG G + + + ES+ +++ DS + + +++ + + K L
Sbjct: 90 TTFLGAIKGGVVPIAINTLLTESDYEYMLTDSAARVAVVSQELLPLFAPMLGKVPTLEHL 149
Query: 143 IPPVPNVSSETTVFDQSQAEKMDG--QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQ 200
+ + +E+ + R +D +Y+SG+TG PKG VH H + +
Sbjct: 150 VVAGGAGEDSLAALLATGSEQFEAAPTRPDDHCFWLYSSGSTGAPKGTVHIHSDLIHTAE 209
Query: 201 MLTEA-WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRES 258
+ D L +GL N L+ PL GAT M + + +++R R
Sbjct: 210 LYARPILGIREGDVVFSAAKLFFAYGLGNGLIFPLAVGATAVLMAERPTPAAVFERLRRH 269
Query: 259 YPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS--ALP 316
P F GVPT+Y + L +LRL C S+ ALP
Sbjct: 270 QP----------DIFYGVPTLYASM----------LANPDCPKEGELRLRACTSAGEALP 309
Query: 317 LPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSD 376
V ++W+ G +L+ G TE + + G GT G P+PG ++++ DE G++
Sbjct: 310 EDVGRRWQARFGVDILDGIGSTEMLHIFLSNRAGDVHYGTSGKPVPGYRLRLI-DEDGAE 368
Query: 377 --AAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGR 430
AGV GE+ + PS YW P+ T +F + + ++GD +++GYY+ GR
Sbjct: 369 ITTAGVAGELQISGPSSAVMYWNNPEKTAATFMGE-WTRSGDKYLVNDEGYYVYAGR 424
>sp|A7GU88|MENE_BACCN 2-succinylbenzoate--CoA ligase OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=menE PE=3 SV=1
Length = 481
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 166/378 (43%), Gaps = 43/378 (11%)
Query: 58 ENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDIS 117
EN A L G ++ ++ K E +A + + G IAV L ELL M D+++
Sbjct: 42 ENLAYLQIKKGQKVAVLMKNGMEMIAVIHALSYIGAIAVLLNTRLSREELLWQMEDAEVI 101
Query: 118 MVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQ--SQAEKMDGQRGEDPALI 175
+L+ + + V + V N ++ V + S AE M I
Sbjct: 102 CLLTDQIFEPEQVPVYT--------FEEVENGPKQSVVIQEEFSLAEAMT---------I 144
Query: 176 VYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLY 235
+YTSGTTGKPKGV+ T+ + A + D +L C+P+ HV GL + L+ +
Sbjct: 145 IYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGL-SLLMKNIM 203
Query: 236 AGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQ 295
G V +PK+ I Q + + +T + V M T L++ +
Sbjct: 204 YGMRVLLVPKYDPDFIHQAIQT----------KGVTIISVVAKMLTDLLE---------R 244
Query: 296 AASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARK 353
+ + LR M+ G P P+++ G + + YGMTE I K
Sbjct: 245 LGNETYPSSLRCMLLGGGPAPKPLLEAC-VQKGIPVYQTYGMTETSSQICTLSADYMLTK 303
Query: 354 AGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKT 413
G+ G PL Q++I +D A GEI VK P++ + Y+K T+++ DG+ T
Sbjct: 304 VGSAGKPLFPCQLRIEKDGKVMPANVEGEIVVKGPNVTRGYFKREDATRETI-VDGWLHT 362
Query: 414 GDTGKQDEDGYYIILGRK 431
GD G D++G+ +L R+
Sbjct: 363 GDLGYVDDEGFLYVLDRR 380
>sp|P38137|FAT2_YEAST Peroxisomal-coenzyme A synthetase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCS60 PE=1 SV=1
Length = 543
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 158/389 (40%), Gaps = 50/389 (12%)
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE-----DY 125
+ I + EF+ LG I PL +Y E E ++D + +
Sbjct: 65 VAISMRNGLEFIVAFLGATMDAKIGAPLNPNYKEKEFNFYLNDLKSKAICVPKGTTKLQS 124
Query: 126 REVLQNV-------------ASKSGAKFSLIPPVPNV------SSETTVFDQSQAEKMDG 166
E+L++ A++ ++ + P N S F + K G
Sbjct: 125 SEILKSASTFGCFIVELAFDATRFRVEYDIYSPEDNYKRVIYRSLNNAKFVNTNPVKFPG 184
Query: 167 -QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHG 225
R D ALI++TSGTT PK V H +I + ++ T D+ +PL HVHG
Sbjct: 185 FARSSDVALILHTSGTTSTPKTVPLLHLNIVRSTLNIANTYKLTPLDRSYVVMPLFHVHG 244
Query: 226 LFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQ 285
L LL+ +V F + W ++ + Y N F+ VPT+ +
Sbjct: 245 LIGVLLSTFRTQGSVVVPDGFHPKLFWDQFVK-YNCNW---------FSCVPTISMIM-- 292
Query: 286 GYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTE--FVMA 343
L + +R + SSAL + E +LE Y MTE M
Sbjct: 293 --------LNMPKPNPFPHIRFIRSCSSALAPATFHKLEKEFNAPVLEAYAMTEASHQMT 344
Query: 344 ISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTK 402
+N G RK GTVG P GV V I +D G VGE+ ++ ++ Y PK K
Sbjct: 345 SNNLPPGKRKPGTVGQPQ-GVTVVILDDNDNVLPPGKVGEVSIRGENVTLGYANNPKANK 403
Query: 403 DSFTA-DGFFKTGDTGKQDEDGYYIILGR 430
++FT + +F+TGD G D +G+ ++ GR
Sbjct: 404 ENFTKRENYFRTGDQGYFDPEGFLVLTGR 432
>sp|P38135|FADK_ECOLI Short-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12)
GN=fadK PE=1 SV=3
Length = 548
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 161/380 (42%), Gaps = 37/380 (9%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G RI EF L G ++VPL S+ E+EL+ V++ M + +++
Sbjct: 75 GDRIAFQLPGWCEFTVIYLACLKIGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQ 134
Query: 128 -----VLQNVASKSGAKFSLI------PPVPNVSSETTVFDQSQAEKMDGQRGEDPALIV 176
++ + ++ ++ P ++S + D + G++ A ++
Sbjct: 135 TRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADNTSLTTAITTHGDELAAVL 194
Query: 177 YTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYA 236
+TSGT G PKGV+ TH +I A + T D F+ PL H G + + AP
Sbjct: 195 FTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLI 254
Query: 237 GATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296
GA + F+ + + T G L+ E +L A
Sbjct: 255 GARSVLLDIFTPDACLALLEQ----------QRCTCMLGATPFVYDLLNVLEKQPADLSA 304
Query: 297 ASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTE----FVMAISNPLRGAR 352
LR +CG + +P V ++ + G +LL YG TE V+ + +PL +R
Sbjct: 305 --------LRFFLCGGTTIPKKVARECQQ-RGIKLLSVYGSTESSPHAVVNLDDPL--SR 353
Query: 353 KAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGFF 411
T G GV++K+ +D + G GE + P++F Y+ P++T + +G++
Sbjct: 354 FMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWY 413
Query: 412 KTGDTGKQDEDGYYIILGRK 431
+GD + DE GY I GRK
Sbjct: 414 YSGDLCRMDEAGYIKITGRK 433
>sp|Q65FT5|MENE_BACLD 2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=menE PE=3 SV=1
Length = 478
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 34/268 (12%)
Query: 170 EDPALIVYTSGTTGKPKGVVHTHKS--IDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227
+D A I+YTSGTTG+PKGV+ T + A L + D++L LPL H+ GL
Sbjct: 145 DDAATIMYTSGTTGRPKGVMQTFANHYFSAVSSALNLGLQ--EHDRWLIALPLFHISGL- 201
Query: 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287
+AL + G TV +F + + ++ + +T + V TM +RL
Sbjct: 202 SALFKSVIYGMTVVLHQRFDAEEVLRSIKD----------QQVTIASVVQTMLSRL---- 247
Query: 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRL--LERYGMTEFVMAIS 345
A LR ++ G PL ++++ + RL ++ YGMTE I+
Sbjct: 248 -------AAKVDRCPGSLRCLLLGGGPAPLSLLEECKR---KRLPVVQSYGMTETCSQIA 297
Query: 346 N--PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKD 403
P K G+ G PL +KI ++ + GEI VK P++ K Y K KD
Sbjct: 298 TLAPEYSIEKLGSAGKPLFASSIKIEKNGTECQPGEHGEITVKGPTVMKGYLKNEAANKD 357
Query: 404 SFTADGFFKTGDTGKQDEDGYYIILGRK 431
SF DG+FKTGD G D+DG+ +L R+
Sbjct: 358 SFN-DGWFKTGDIGYFDDDGFLYVLDRR 384
>sp|Q53005|4HBCL_RHOPA 4-hydroxybenzoate--CoA/benzoate--CoA ligase OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=hbaA PE=1
SV=1
Length = 539
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 167/419 (39%), Gaps = 43/419 (10%)
Query: 24 QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVA 83
Q+S SY +L + R+ +L ++ EN RI +V K + +F
Sbjct: 31 QRSLSYGELRDAVARVGPMLARLGVE-------QEN----------RIALVLKDTVDFPI 73
Query: 84 GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLI 143
G +G + V L + +++ DS +V ++ ++ V++ A+ ++I
Sbjct: 74 LFWGAIRAGIVPVLLNTRLTADQYRYLLEDSRSRVVFASSEFLPVIEEAAADLPHLRTII 133
Query: 144 P----PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQV 199
P P + + + + +D A Y+SGTTG PKGV+H H S
Sbjct: 134 AVGDAPAPTLQLANLLATEQEGGAPAATCADDIAYWQYSSGTTGMPKGVMHVHSSPRVMA 193
Query: 200 QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRES 258
+ Y D L +GL NA+ P+ GAT P + + ++ R
Sbjct: 194 ENAGRRIGYREDDVVFSAAKLFFAYGLGNAMFCPMGIGATSVLYPERPTADSVFDTLRLH 253
Query: 259 YPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318
P T VPT+Y AM + ++ + + +LRL + LP
Sbjct: 254 QP----------TLLFAVPTLYA-------AMLADPRSRTETLPDRLRLCVSAGEPLPAQ 296
Query: 319 VMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAA 378
V W GH ++ G TE L A + GT G P+ G ++++ D G D A
Sbjct: 297 VGLNWRNRFGHDIVNGVGSTEMGHLFLTNLPHAVEYGTSGVPVDGYRLRLVGDR-GQDVA 355
Query: 379 G--VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435
+GE+ V S YW T+ +F + + +TGD + DG Y GR F
Sbjct: 356 DDEIGELLVSGGSSAAGYWNQRDKTRTTFVGE-WTRTGDKYHRRADGVYTYCGRTDDIF 413
>sp|P39846|PPSB_BACSU Plipastatin synthase subunit B OS=Bacillus subtilis (strain 168)
GN=ppsB PE=1 SV=1
Length = 2560
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 174/424 (41%), Gaps = 59/424 (13%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
++ A++ + ++Y QL A +I+ L + G G + ++
Sbjct: 484 EAAALKMGNECWTYRQLQVRANQIAHALIEKGV-----------------GSGDIVAVMM 526
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135
S E A +LG W +G +PL +P L ++ DS + +L ED
Sbjct: 527 GRSMEMPAALLGIWKAGGAYMPLDPHFPAERLSFLLKDSQAAQLLIEEDL---------- 576
Query: 136 SGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSI 195
SLIPP ++ T +S + D A ++YTSGTTG+PKGV+ H I
Sbjct: 577 ----ISLIPPSYEGNTITIEHTESYQTEAPNMPPGDLAYLIYTSGTTGRPKGVLVDHHGI 632
Query: 196 DAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRW 255
+Q E + T D LH + G +L PL +GA V + +
Sbjct: 633 ANTLQWRREEYSMTEQDISLHLFS-YVFDGCVTSLFTPLLSGACVLLTTDDEAKDVLALK 691
Query: 256 RESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSAL 315
R+ A ++ VP++Y L L+ +A AK LR++ A+
Sbjct: 692 RKI-------ARYKVSHMIIVPSLYRVL----------LEVMTADDAKSLRIVTFAGEAV 734
Query: 316 PLPVMQQWETIT-GHRLLERYGMTEFVMAISNPLRGARKAG--TVGNPLPGVQVKIAEDE 372
+++ + I L YG TE +A + LR K T+G+P+ +V +
Sbjct: 735 TPDLLELNQIICPSAELANEYGPTENSVA-TTILRHLNKKERITIGHPIRNTKVFVLHGN 793
Query: 373 SGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDGYYI 426
GE+C+ L + Y+K ++T+ +F+ F ++TGD G+ DG
Sbjct: 794 QMQPIGAAGELCISGAGLARGYYKQQELTQKAFSDHPFLEGERLYRTGDAGRFLPDGTIE 853
Query: 427 ILGR 430
+GR
Sbjct: 854 YIGR 857
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 180/438 (41%), Gaps = 80/438 (18%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
+ +A+ +Y L A R +++L ++T G +G++
Sbjct: 1515 EHIAVVCGHSQLTYRDLNEKAERAAAMLIKQGVRT-----------------GDIVGLML 1557
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135
S + + GVL +G +P+ YP+ + +++DS ++L+ L A
Sbjct: 1558 DRSPDMIIGVLSILKAGGAYLPIDPEYPKERISFMLNDSGAKLLLTERG----LNKPADY 1613
Query: 136 SGAKFSL-------IPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGV 188
+G + IP +V+ E V DQ PA ++YTSGTTG+PKGV
Sbjct: 1614 TGHILYIDECENNSIPA--DVNIEEIVTDQ-------------PAYVIYTSGTTGQPKGV 1658
Query: 189 VHTHKSIDAQVQMLTEAWEYTSADQFL----HCLPLHHVHGLFNALLAPLYAGATVEFMP 244
+ H+++ + ++ +E+ D + +C V +F ALL G+T+ +
Sbjct: 1659 IVEHRNVISLLKHQNLPFEFNHEDVWTLFHSYCFDF-SVWEMFGALL----NGSTLVVVS 1713
Query: 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304
K + R Q +R E +T PT + L+ L+ + +
Sbjct: 1714 KETARDP-QAFRLLL------KKERVTVLNQTPTAFYGLM---------LEDQNHTDHLN 1757
Query: 305 LRLMMCGSSALPLPVMQQWETITGHR-LLERYGMTEFVMAIS----NPLRGARKAGTVGN 359
+R ++ G AL ++Q W H L+ YG+TE + ++ + A+ +G
Sbjct: 1758 IRYVIFGGEALQPGLLQSWNEKYPHTDLINMYGITETTVHVTFKKLSAADIAKNKSNIGR 1817
Query: 360 PLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTA------DGFFK 412
PL +Q + + GV GE+ + + + Y ++T D F + D ++
Sbjct: 1818 PLSTLQAHVMDAHMNLQPTGVPGELYIGGEGVARGYLNRDELTADRFVSNPYLPGDRLYR 1877
Query: 413 TGDTGKQDEDGYYIILGR 430
TGD K+ +G LGR
Sbjct: 1878 TGDLAKRLSNGELEYLGR 1895
>sp|P0C063|GRSB_ANEMI Gramicidin S synthase 2 OS=Aneurinibacillus migulanus GN=grsB PE=3
SV=2
Length = 4451
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 41/370 (11%)
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130
+ I+ + S E + G+ +G VP+ +YP+ + +++ DS +++L+
Sbjct: 3642 VAIMTERSLEMIVGIFSILKAGGAYVPIDPAYPQERIQYLLEDSGAALLLTQ-------S 3694
Query: 131 NVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVH 190
+V +K + + V D + M+ + D A I+YTSGTTGKPKGV+
Sbjct: 3695 HVLNKLPVDIEWLDLT---DEQNYVEDGTNLPFMN--QSTDLAYIIYTSGTTGKPKGVMI 3749
Query: 191 THKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRG 250
H+SI +Q E +E+ D L G +L AP+ AGAT +PK
Sbjct: 3750 EHQSIINCLQWRKEEYEFGPGDTALQVFSF-AFDGFVASLFAPILAGAT-SVLPK----- 3802
Query: 251 IWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310
+ ++ + A E IT + GVP++++ + L +S+ + LR +
Sbjct: 3803 -EEEAKDPVALKKLIASEEITHYYGVPSLFSAI----------LDVSSSKDLQNLRCVTL 3851
Query: 311 GSSALPLPVMQQWETITGHRLL-ERYGMTE--FVMAISNPLRGARKAGTVGNPLPGVQVK 367
G LP ++++ + + YG TE V I ++ ++ T+G PL V V
Sbjct: 3852 GGEKLPAQIVKKIKEKNKEIEVNNEYGPTENSVVTTIMRDIQVEQEI-TIGRPLSNVDVY 3910
Query: 368 IAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQD 420
I G VGE+C+ L + Y P++T D F + F +KTGD K
Sbjct: 3911 IVNCNHQLQPVGVVGELCIGGQGLARGYLNKPELTADKFVVNPFVPGERMYKTGDLAKWR 3970
Query: 421 EDGYYIILGR 430
DG +GR
Sbjct: 3971 SDGMIEYVGR 3980
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 183/451 (40%), Gaps = 98/451 (21%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
D +A+ +++ SY +L + A +++ +L +K NS V GI+
Sbjct: 2557 DHIAVIDEREKLSYQELNAKANQLARVL--------RQKGVQPNSMV---------GIMV 2599
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135
S + + G+LG +G VP+ + YP+ + ++M DS +++L+ + ++ Q +A
Sbjct: 2600 DRSLDMIVGMLGVLKAGGAYVPIDIDYPQERISYMMEDSGAALLLTQQ---KLTQQIA-- 2654
Query: 136 SGAKFSLIPPVPNVSSETTVFDQ-----SQAEKMDG-QRGEDPALIVYTSGTTGKPKGVV 189
S + DQ +A ++ R A I+YTSGTTGKPKGV+
Sbjct: 2655 -------------FSGDILYLDQEEWLHEEASNLEPIARPHYIAYIIYTSGTTGKPKGVM 2701
Query: 190 HTHKSIDAQVQMLTEAW-EYTSADQF-LHCLPLHHVHGLFNA----LLAPLYAGATVEFM 243
H+S V M AW + D F + L + F+ L G +
Sbjct: 2702 IEHQSY-VNVAM---AWKDAYRLDTFPVRLLQMASFAFAFDVSAGDFARALLTGGQLIVC 2757
Query: 244 PK------FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297
P S+ I +++ IT F P + L++ ++
Sbjct: 2758 PNEVKMDPASLYAIIKKY-------------DITIFEATPALVIPLMEYIYEQKLDI--- 2801
Query: 298 SASAAKQLRLMMCGSSALPLPVMQQWETITGH-----RLLERYGMTEFVMAIS---NPLR 349
QL++++ GS + M+ ++T+ R++ YG+TE + S PL
Sbjct: 2802 -----SQLQILIVGSDSCS---MEDFKTLVSRFGSTIRIVNSYGVTEACIDSSYYEQPLS 2853
Query: 350 GARKAGTV--GNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFT 406
GTV G P +++ I GV GE+C+ + + Y P +T + F
Sbjct: 2854 SLHVTGTVPIGKPYANMKMYIMNQYLQIQPVGVIGELCIGGAGVARGYLNRPDLTAEKFV 2913
Query: 407 ADGF------FKTGDTGKQDEDGYYIILGRK 431
+ F ++TGD + DG LGR
Sbjct: 2914 PNPFVPGEKLYRTGDLARWMPDGNVEFLGRN 2944
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 159/377 (42%), Gaps = 53/377 (14%)
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130
IGI+ + S E + G+LG +G VP+ YP+ E + M DS + +VL+ ++
Sbjct: 521 IGIMMERSVEMIVGILGILKAGGAFVPIDPEYPK-ERIGYMLDS-VRLVLTQRHLKDKF- 577
Query: 131 NVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDG-QRGEDPALIVYTSGTTGKPKGVV 189
+ K +++ P++S E T E++D ED I+YTSGTTGKPKGV+
Sbjct: 578 -----AFTKETIVIEDPSISHELT-------EEIDYINESEDLFYIIYTSGTTGKPKGVM 625
Query: 190 HTHKSIDAQVQMLTEAWEYTSAD------QFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243
HK+I V +L +E T+ + Q+ C + + + L +G + +
Sbjct: 626 LEHKNI---VNLLHFTFEKTNINFSDKVLQYTTC----SFDVCYQEIFSTLLSGGQLYLI 678
Query: 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK 303
K + R + Q + R + +F P + + I + E + K
Sbjct: 679 RKETQRDVEQLFDLV-----KRENIEVLSF---PVAFLKFIFN----EREFINRFPTCVK 726
Query: 304 QLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAIS---NPLRGARKAGTVGNP 360
++ G + +++ L YG +E + + NP + +G P
Sbjct: 727 H--IITAGEQLVVNNEFKRYLHEHNVHLHNHYGPSETHVVTTYTINPEAEIPELPPIGKP 784
Query: 361 LPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKT 413
+ + I + E G VGE+ + ++ + Y ++T + F AD F ++T
Sbjct: 785 ISNTWIYILDQEQQLQPQGIVGELYISGANVGRGYLNNQELTAEKFFADPFRPNERMYRT 844
Query: 414 GDTGKQDEDGYYIILGR 430
GD + DG LGR
Sbjct: 845 GDLARWLPDGNIEFLGR 861
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 147/381 (38%), Gaps = 64/381 (16%)
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130
+G++ + S E + G++G +G +PL YP + +++ D + ++L+ Q
Sbjct: 1559 VGLLVERSPEMLVGIMGILKAGGAYLPLDPEYPADRISYMIQDCGVRIMLTQ-------Q 1611
Query: 131 NVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVH 190
++ S +F + + E +++ + + D A I+YTSG+TGKPKGV+
Sbjct: 1612 HLLSLVHDEFDCV-----ILDEDSLYKGDSSNLAPVNQAGDLAYIMYTSGSTGKPKGVMV 1666
Query: 191 THKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRG 250
H+++ V+ T + D+ + + F+AL F V G
Sbjct: 1667 EHRNVIRLVKN-TNYVQVREDDRIIQTGAIG-----FDAL--------------TFEVFG 1706
Query: 251 IWQRWRESYPVNGNRAGEA-----------ITAFTGVPTMYTRLIQGYEAMDTELQAASA 299
E YPV + +A IT ++ +L QG E M
Sbjct: 1707 SLLHGAELYPVTKDVLLDAEKLHKFLQANQITIMWLTSPLFNQLSQGTEEM--------- 1757
Query: 300 SAAKQLRLMMCGSSAL-PLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGT-- 356
LR ++ G AL P + + YG TE + L
Sbjct: 1758 --FAGLRSLIVGGDALSPKHINNVKRKCPNLTMWNGYGPTENTTFSTCFLIDKEYDDNIP 1815
Query: 357 VGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF----- 410
+G + V I + GV GE+CV + + Y P +T++ F + F
Sbjct: 1816 IGKAISNSTVYIMDRYGQLQPVGVPGELCVGGDGVARGYMNQPALTEEKFVPNPFAPGER 1875
Query: 411 -FKTGDTGKQDEDGYYIILGR 430
++TGD + DG LGR
Sbjct: 1876 MYRTGDLARWLPDGTIEYLGR 1896
>sp|A9MQH7|CAIC_SALAR Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiC PE=3
SV=1
Length = 517
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 185/430 (43%), Gaps = 68/430 (15%)
Query: 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAG 84
+ +SY L R ++L S ++ K +N A+ C P F F
Sbjct: 36 QHFSYASLNREINRTANLFYSLGIR------KGDNVALHLDNC---------PEFIFC-- 78
Query: 85 VLGTWFS----GCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKF 140
WF G I VP+ E ++ +S S+++++ + + + + +
Sbjct: 79 ----WFGLAKIGAIVVPINARLLREESAWILQNSRTSLLVTSAPFYPMYRQIQQEGRTPL 134
Query: 141 SLIPPV-PNVSSETTV--FDQSQAEKMD------GQRGEDPALIVYTSGTTGKPKGVVHT 191
S I + P + +E V F +A++ D +D A I++TSGTT +PKGVV T
Sbjct: 135 SHICLIGPTLPAEEGVSHFYTLKAQQPDVLLYTPPLTPDDTAEILFTSGTTSRPKGVVIT 194
Query: 192 HKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVR 249
H ++ + +W+ D +L +P H+ A +A GAT + K+S R
Sbjct: 195 HYNL--RFAGYYSSWQCALREDDVYLTVMPAFHIDCQCTAAMAAFSVGATFVLIEKYSAR 252
Query: 250 GIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309
W + R+ T +P M L+ A D LR +M
Sbjct: 253 AFWGQVRKY----------CATVTECIPMMIRTLMTQTPAADDRHHC--------LREVM 294
Query: 310 CGSSALPLPVMQQWETIT---GHRLLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQ 365
L L V Q+ E T G RL YGMTE ++ I G R+ ++G P +
Sbjct: 295 ---FYLNLSV-QEKEAFTERFGVRLFTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYE 350
Query: 366 VKIAEDESGSDAAG-VGEICVK---SPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDE 421
+I +++ + G +GEIC+K +LFK Y++ P T + +G+ TGD+G +DE
Sbjct: 351 AEIRNEQNRALPPGEIGEICIKGIPGKTLFKSYFERPDATAKALEPNGWLHTGDSGYRDE 410
Query: 422 DGYYIILGRK 431
+G++ + R+
Sbjct: 411 EGFFYFVDRR 420
>sp|P0C064|GRSB_BREBE Gramicidin S synthase 2 OS=Brevibacillus brevis GN=grsB PE=1 SV=2
Length = 4450
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 167/371 (45%), Gaps = 43/371 (11%)
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130
+ I+ + S E + G+ +G VP+ +YP+ + +++ DS +++L+
Sbjct: 3641 VAIMTERSLEMIVGIFSILKAGGAYVPIDPAYPQERIQYLLEDSGATLLLTQ-------S 3693
Query: 131 NVASKSGAKFSLIPPVPNVSSETT-VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVV 189
+V +K + +++ E V D + M+ + D A I+YTSGTTGKPKGV+
Sbjct: 3694 HVLNKLPVDIEWL----DLTDEQNYVEDGTNLPFMN--QSTDLAYIIYTSGTTGKPKGVM 3747
Query: 190 HTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVR 249
H+SI +Q E +E+ D L G +L AP+ AGAT +PK
Sbjct: 3748 IEHQSIINCLQWRKEEYEFGPGDTALQVFSF-AFDGFVASLFAPILAGAT-SVLPK---- 3801
Query: 250 GIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309
+ ++ + A E IT + GVP++++ + L +S+ + LR +
Sbjct: 3802 --EEEAKDPVALKKLIASEEITHYYGVPSLFSAI----------LDVSSSKDLQNLRCVT 3849
Query: 310 CGSSALPLPVMQQWETITGHRLL-ERYGMTE--FVMAISNPLRGARKAGTVGNPLPGVQV 366
G LP ++++ + + YG TE V I ++ ++ T+G PL V V
Sbjct: 3850 LGGEKLPAQIVKKIKEKNKEIEVNNEYGPTENSVVTTIMRDIQVEQEI-TIGCPLSNVDV 3908
Query: 367 KIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQ 419
I G VGE+C+ L + Y P++T D F + F +KTGD K
Sbjct: 3909 YIVNCNHQLQPVGVVGELCIGGQGLARGYLNKPELTADKFVVNPFVPGERMYKTGDLAKW 3968
Query: 420 DEDGYYIILGR 430
DG +GR
Sbjct: 3969 RSDGMIEYVGR 3979
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 193/467 (41%), Gaps = 107/467 (22%)
Query: 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSA 61
E+F+ +K D +A+ +++ SY +L + A +++ +L +K NS
Sbjct: 2546 ELFEEQVEKTP---DHIAVIDEREKLSYQELNAKANQLARVL--------RQKGVQPNSM 2594
Query: 62 VLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLS 121
V GI+ S + + G+LG +G VP+ + YP+ + ++M DS +++L+
Sbjct: 2595 V---------GIMVDRSLDMIVGMLGVLKAGGAYVPIDIDYPQERISYMMEDSGAALLLT 2645
Query: 122 TEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ-----AEKMDG-QRGEDPALI 175
+ ++ Q +A S + DQ + A ++ R +D A I
Sbjct: 2646 QQ---KLTQQIA---------------FSGDILYLDQEEWLHEEASNLEPIARPQDIAYI 2687
Query: 176 VYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQF-LHCLPLHHVH---------- 224
+YTSGTTGKPKGV+ H+S V M AW+ D + L P+ +
Sbjct: 2688 IYTSGTTGKPKGVMIEHQSY-VNVAM---AWK----DAYRLDTFPVRLLQMASFAFDVSA 2739
Query: 225 GLF-NALLA--PLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYT 281
G F ALL L M S+ I +++ IT F P +
Sbjct: 2740 GDFARALLTGGQLIVCPNEVKMDPASLYAIIKKY-------------DITIFEATPALVI 2786
Query: 282 RLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-----RLLERYG 336
L++ ++ QL++++ GS + M+ ++T+ R++ YG
Sbjct: 2787 PLMEYIYEQKLDI--------SQLQILIVGSDSCS---MEDFKTLVSRFGSTIRIVNSYG 2835
Query: 337 MTEFVMAIS---NPLRGARKAGTV--GNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSL 390
+TE + S PL GTV G P +++ I GV GE+C+ +
Sbjct: 2836 VTEACIDSSYYEQPLSSLHVTGTVPIGKPYANMKMYIMNQYLQIQPVGVIGELCIGGAGV 2895
Query: 391 FKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDGYYIILGRK 431
+ Y P +T + F + F ++TGD + DG LGR
Sbjct: 2896 ARGYLNRPDLTAEKFVPNPFVPGEKLYRTGDLARWMPDGNVEFLGRN 2942
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 159/377 (42%), Gaps = 53/377 (14%)
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130
IGI+ + S E + G+LG +G VP+ YP+ E + M DS + +VL+ ++
Sbjct: 521 IGIMMERSVEMIVGILGILKAGGAFVPIDPEYPK-ERIGYMLDS-VRLVLTQRHLKDKF- 577
Query: 131 NVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDG-QRGEDPALIVYTSGTTGKPKGVV 189
+ K +++ P++S E T E++D ED I+YTSGTTGKPKGV+
Sbjct: 578 -----AFTKETIVIEDPSISHELT-------EEIDYINESEDLFYIIYTSGTTGKPKGVM 625
Query: 190 HTHKSIDAQVQMLTEAWEYTSAD------QFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243
HK+I V +L +E T+ + Q+ C + + + L +G + +
Sbjct: 626 LEHKNI---VNLLHFTFEKTNINFSDKVLQYTTC----SFDVCYQEIFSTLLSGGQLYLI 678
Query: 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK 303
K + R + Q + R + +F P + + I + E + K
Sbjct: 679 RKETQRDVEQLFDLV-----KRENIEVLSF---PVAFLKFIFN----EREFINRFPTCVK 726
Query: 304 QLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAIS---NPLRGARKAGTVGNP 360
++ G + +++ L YG +E + + NP + +G P
Sbjct: 727 H--IITAGEQLVVNNEFKRYLHEHNVHLHNHYGPSETHVVTTYTINPEAEIPELPPIGKP 784
Query: 361 LPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKT 413
+ + I + E G VGE+ + ++ + Y ++T + F AD F ++T
Sbjct: 785 ISNTWIYILDQEQQLQPQGIVGELYISGANVGRGYLNNQELTAEKFFADPFRPNERMYRT 844
Query: 414 GDTGKQDEDGYYIILGR 430
GD + DG LGR
Sbjct: 845 GDLARWLPDGNIEFLGR 861
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 147/381 (38%), Gaps = 64/381 (16%)
Query: 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130
+G++ + S E + G++G +G +PL YP + +++ D + ++L+ Q
Sbjct: 1559 VGLLVERSPEMLVGIMGILKAGGAYLPLDPEYPADRISYMIQDCGVRIMLTQ-------Q 1611
Query: 131 NVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVH 190
++ S +F + + E +++ + + D A I+YTSG+TGKPKGV+
Sbjct: 1612 HLLSLVHDEFDCV-----ILDEDSLYKGDSSNLAPVNQAGDLAYIMYTSGSTGKPKGVMV 1666
Query: 191 THKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRG 250
H+++ V+ T + D+ + + F+AL F V G
Sbjct: 1667 EHRNVIRLVKN-TNYVQVREDDRIIQTGAIG-----FDAL--------------TFEVFG 1706
Query: 251 IWQRWRESYPVNGNRAGEA-----------ITAFTGVPTMYTRLIQGYEAMDTELQAASA 299
E YPV + +A IT ++ +L QG E M
Sbjct: 1707 SLLHGAELYPVTKDVLLDAEKLHKFLQANQITIMWLTSPLFNQLSQGTEEM--------- 1757
Query: 300 SAAKQLRLMMCGSSAL-PLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGT-- 356
LR ++ G AL P + + YG TE + L
Sbjct: 1758 --FAGLRSLIVGGDALSPKHINNVKRKCPNLTMWNGYGPTENTTFSTCFLIDKEYDDNIP 1815
Query: 357 VGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF----- 410
+G + V I + GV GE+CV + + Y P +T++ F + F
Sbjct: 1816 IGKAISNSTVYIMDRYGQLQPVGVPGELCVGGDGVARGYMNQPALTEEKFVPNPFAPGER 1875
Query: 411 -FKTGDTGKQDEDGYYIILGR 430
++TGD + DG LGR
Sbjct: 1876 MYRTGDLARWLPDGTIEYLGR 1896
>sp|A7Z809|MENE_BACA2 2-succinylbenzoate--CoA ligase OS=Bacillus amyloliquefaciens
(strain FZB42) GN=menE PE=3 SV=1
Length = 487
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 159/373 (42%), Gaps = 51/373 (13%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-R 126
G R I+ E V V + G AV L + E L + DS ++L + + R
Sbjct: 54 GDRAAILLSNRPEMVYAVHACFLLGAEAVLLNTKLSKQERLFQLEDSQAKLLLMEDGFCR 113
Query: 127 EVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGE------DPALIVYTSG 180
E ++ + T D+ QAE+ E D A ++YTSG
Sbjct: 114 EEYESAVA------------------TADVDELQAEEAGDIEPEAYVTLDDTATLMYTSG 155
Query: 181 TTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240
TTG+PKGV T + + T D++L LPL H+ GL +AL + G V
Sbjct: 156 TTGRPKGVQQTFGNHYSSAVSSALNLGVTERDRWLIALPLFHISGL-SALFKSVIYGMPV 214
Query: 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASAS 300
KFSV + + + +T + V TM + L+ A +
Sbjct: 215 VLHQKFSVTDVLD----------SISSHQVTIISAVQTMLSGLL-----------AETEQ 253
Query: 301 AAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAIS--NPLRGARKAGTVG 358
+ LR ++ G PLP++++ + + YG+TE I +P K G+ G
Sbjct: 254 CPESLRCILLGGGPAPLPLLEECRR-KQFPVFQSYGLTETCSQIVTLSPEFSMDKLGSAG 312
Query: 359 NPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGK 418
PL +++I +D + GEI VK P++ K Y+ + +F +G+FKTGD G
Sbjct: 313 KPLFSCEIRIEKDGNPCAPFEHGEITVKGPNVMKGYYHRDDANQAAFH-NGWFKTGDLGY 371
Query: 419 QDEDGYYIILGRK 431
D++G+ +L R+
Sbjct: 372 LDDEGFLYVLDRR 384
>sp|P23971|MENE_BACSU 2-succinylbenzoate--CoA ligase OS=Bacillus subtilis (strain 168)
GN=menE PE=3 SV=2
Length = 486
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 26/261 (9%)
Query: 173 ALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLA 232
A ++YTSGTTGKPKGV T + T D++L LPL H+ GL +AL
Sbjct: 147 ATLMYTSGTTGKPKGVQQTFGNHYFSAVSSALNLGITEQDRWLIALPLFHISGL-SALFK 205
Query: 233 PLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDT 292
+ G TV +FSV + + +N + +T + V TM L++
Sbjct: 206 SVIYGMTVVLHQRFSVSDVL------HSINRHE----VTMISAVQTMLASLLE------- 248
Query: 293 ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAIS--NPLRG 350
+ + +R ++ G PLP++++ G + + YGMTE I +P
Sbjct: 249 ----ETNRCPESIRCILLGGGPAPLPLLEECRE-KGFPVFQSYGMTETCSQIVTLSPEFS 303
Query: 351 ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGF 410
K G+ G PL ++KI D + GEI VK P++ K Y+ + SF +G+
Sbjct: 304 MEKLGSAGKPLFSCEIKIERDGQVCEPYEHGEIMVKGPNVMKSYFNRESANEASFQ-NGW 362
Query: 411 FKTGDTGKQDEDGYYIILGRK 431
KTGD G D +G+ +L R+
Sbjct: 363 LKTGDLGYLDNEGFLYVLDRR 383
>sp|Q838K1|MENE_ENTFA 2-succinylbenzoate--CoA ligase OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=menE PE=3 SV=1
Length = 485
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 164/366 (44%), Gaps = 41/366 (11%)
Query: 70 RIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129
R+ + +K S E +L W G + L +EL + D+ + ++ + + +L
Sbjct: 50 RVALFSKNSKELYFSILALWELGKELLFLNTHLTLAELTFQLKDAQVKTIIGAPETQALL 109
Query: 130 QNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVV 189
+ + S + P + + ++ Q + D E A I+YTSGTTG+PKGV+
Sbjct: 110 EEI--------SFVDVQPMIKKQHSLSHQEFQQPSDL---ESVASIMYTSGTTGQPKGVL 158
Query: 190 HTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVR 249
K+ A + E T+ D +L +PL H+ GL + ++ L G ++ KF +
Sbjct: 159 QRFKNHLASARGTQENMGITAEDCWLCAVPLFHISGL-SIVVRQLVLGCSIRLYDKFDEQ 217
Query: 250 GIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309
+ Q +E T + V TM +L+ Y A + + M+
Sbjct: 218 QVTQDLQEGRG----------TVISVVATMLQQLLSVY---------PEAGYSASFKGML 258
Query: 310 CGSSALPLPVMQQWETITGHRLLERYGMTEF---VMAISNPLRGARKAGTVGNPLPGVQV 366
G + + Q E G +++ YGMTE V+A+ A K G+ G PL +Q+
Sbjct: 259 LGGGPIAPDKLAQCEE-KGIPVIQSYGMTETCSQVVALKFE-DAALKIGSAGQPLKDMQI 316
Query: 367 KIAEDESGSDA--AGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGY 424
KI DE G + VGEI +K P++ Y L + + +TADG+FKTGD G D Y
Sbjct: 317 KIV-DELGQEQPEKQVGEILLKGPNVVSGY--LNQRQPEKWTADGWFKTGDMGYLDAQSY 373
Query: 425 YIILGR 430
++ R
Sbjct: 374 LYLVSR 379
>sp|Q9S777|4CL3_ARATH 4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1
Length = 561
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 165/389 (42%), Gaps = 55/389 (14%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G I I+ + S EFV +G G ++ Y EL + S ++++ Y +
Sbjct: 100 GDVIMILLQNSAEFVFSFMGASMIGAVSTTANPFYTSQELYKQLKSSGAKLIITHSQYVD 159
Query: 128 VLQNVASKSGAKFSLIP---PVP-NVSSETTVFDQSQAEKMDGQR---GEDPALIVYTSG 180
L+N+ G +LI P P N +T+ + G+D A + ++SG
Sbjct: 160 KLKNL----GENLTLITTDEPTPENCLPFSTLITDDETNPFQETVDIGGDDAAALPFSSG 215
Query: 181 TTGKPKGVVHTHKS----IDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYA 236
TTG PKGVV THKS + QV S D L LPL H++ L + LL L +
Sbjct: 216 TTGLPKGVVLTHKSLITSVAQQVDGDNPNLYLKSNDVILCVLPLFHIYSLNSVLLNSLRS 275
Query: 237 GATVEFMPKFSVRGIW---QRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTE 293
GATV M KF + + QR R +T VP + L + +
Sbjct: 276 GATVLLMHKFEIGALLDLIQRHR-------------VTIAALVPPLVIALAKNPTVNSYD 322
Query: 294 LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLER-----YGMTEFVMAISNPL 348
L + +R ++ G++ P+ ++ + RL + YGMTE +S L
Sbjct: 323 LSS--------VRFVLSGAA----PLGKELQDSLRRRLPQAILGQGYGMTEAGPVLSMSL 370
Query: 349 RGAR-----KAGTVGNPLPGVQVKIAEDESGSDAA--GVGEICVKSPSLFKEYWKLPKVT 401
A+ K+G+ G + ++K+ E+ GEIC++ + KEY P+ T
Sbjct: 371 GFAKEPIPTKSGSCGTVVRNAELKVVHLETRLSLGYNQPGEICIRGQQIMKEYLNDPEAT 430
Query: 402 KDSFTADGFFKTGDTGKQDEDGYYIILGR 430
+ +G+ TGD G DED I+ R
Sbjct: 431 SATIDEEGWLHTGDIGYVDEDDEIFIVDR 459
>sp|Q84P24|4CLL6_ARATH 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6
PE=2 SV=2
Length = 566
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 33/276 (11%)
Query: 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT--EAWEYT---SADQFLHCLPLHH 222
+ +D A I+Y+SGTTG KGV+ TH+++ A +++ EA +Y S++ +L LPL H
Sbjct: 202 KQDDVAAIMYSSGTTGASKGVLLTHRNLIASMELFVRFEASQYEYPGSSNVYLAALPLCH 261
Query: 223 VHGLFNALLAPLYAGATVEFMPKFS---VRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279
++GL ++ L G+T+ M +F V + +R++ IT F VP M
Sbjct: 262 IYGLSLFVMGLLSLGSTIVVMKRFDASDVVNVIERFK-------------ITHFPVVPPM 308
Query: 280 YTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQW-ETITGHRLLERYGMT 338
A+ + + K L+ + G++ L ++ + +T+ L++ YGMT
Sbjct: 309 LM-------ALTKKAKGVCGEVFKSLKQVSSGAAPLSRKFIEDFLQTLPHVDLIQGYGMT 361
Query: 339 EFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICVKSPSLFKEY 394
E + + + +VG P +Q K+ + SGS GE+ ++ P + K Y
Sbjct: 362 ESTAVGTRGFNSEKLSRYSSVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGY 421
Query: 395 WKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGR 430
PK T+ S D + +TGD DEDGY I+ R
Sbjct: 422 LNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDR 457
>sp|Q72YK9|MENE_BACC1 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC
10987) GN=menE PE=3 SV=1
Length = 481
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 177/425 (41%), Gaps = 56/425 (13%)
Query: 9 KKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG 68
++ + D AI +++ ++ QL + + L +K G
Sbjct: 10 QRAFLTPDRTAIEIEEEKVTFMQLHEKVVSVCEHLTHIGVKR-----------------G 52
Query: 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128
++ ++ K E + + + G +AV L ELL M D+++ +++ +D+
Sbjct: 53 QKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSREELLWQMDDAEVICLVTDQDFD-- 110
Query: 129 LQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGV 188
+K +S + E ++ ++ E + I+YTSGTTGKPKGV
Sbjct: 111 -----AKDIPVYSFAEVMNGPKEEASIQEEFSLE--------EAMTIIYTSGTTGKPKGV 157
Query: 189 VHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV 248
+ T+ + A + D +L C+P+ HV GL + L+ + G + +PK+
Sbjct: 158 ILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGL-SLLMKNIMYGMRILLVPKYDA 216
Query: 249 RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308
I + + +T + V M T L++ + + + LR M
Sbjct: 217 DFIHKALQT----------RGVTIISVVSKMLTDLLE---------RLGAETYPSSLRCM 257
Query: 309 MCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQV 366
+ G P P+++ G + + YGMTE I K G+ G PL Q+
Sbjct: 258 LLGGGPAPKPLLETC-VEKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQL 316
Query: 367 KIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYI 426
+I +D A GEI VK P++ Y+ T+++ +G+ TGD G DE+G+
Sbjct: 317 RIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDIGYLDEEGFLY 375
Query: 427 ILGRK 431
+L R+
Sbjct: 376 VLDRR 380
>sp|Q8ENZ7|MENE_OCEIH 2-succinylbenzoate--CoA ligase OS=Oceanobacillus iheyensis (strain
DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=menE PE=3
SV=1
Length = 480
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 160/379 (42%), Gaps = 61/379 (16%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G I I++ E + + + G +AV L +EL + DSD +++++E ++
Sbjct: 54 GDHIAILSTNCAEMIQIIYACSYLGAVAVLLNTKLTINELNQQLLDSDAKVIITSESFKA 113
Query: 128 ---VLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGK 184
VLQ + + +V+ +T++ D D ++YTSGTTG
Sbjct: 114 SEFVLQRMDYNE---------LESVTEDTSIITLKSEIYFD-----DIFTMMYTSGTTGF 159
Query: 185 PKGVVHTHKSIDAQVQMLTEAWEYTSA---------DQFLHCLPLHHVHGLFNALLAPLY 235
PK V T + W TS+ D++L LPL HV GL L + +Y
Sbjct: 160 PKAVQQTFGN---------HWWSATSSALNLGLHDNDKWLIPLPLFHVSGLSTMLKSVIY 210
Query: 236 AGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQ 295
G + + KF V V+ +T + V M RLI+ +
Sbjct: 211 -GMPIYVLEKFEVE----------KVHNAIMDRKVTIVSVVTVMVQRLIK---------R 250
Query: 296 AASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAIS--NPLRGARK 353
+ R M+ G P +++Q + + + YGMTE I P +K
Sbjct: 251 LGNHHYPNDFRCMLLGGGPAPKSLLEQ-AKLKNIPVFQSYGMTETSSQIVTLTPEDALKK 309
Query: 354 AGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKT 413
G+ G PL Q+KIA +E+ + +GEI VK P + K Y+K + K+ F + + T
Sbjct: 310 IGSAGKPLFPAQLKIAHNENNPNQ--IGEILVKGPMVTKGYYKRAETNKEVF-ENNWLHT 366
Query: 414 GDTGKQDEDGYYIILGRKG 432
GD G DE GY ++ R+
Sbjct: 367 GDMGYLDEQGYLYVVDRRN 385
>sp|Q9CHK3|MENE_LACLA 2-succinylbenzoate--CoA ligase OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=menE PE=3 SV=2
Length = 451
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 128/264 (48%), Gaps = 38/264 (14%)
Query: 170 EDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNA 229
E A+I+ TS TTGK K V T I V+ E D +L LP+ HV GL +
Sbjct: 130 EKIAVIMNTSATTGKFKSVPITWGMISNHVKASKETLGAYDNDNWLVILPMFHVSGL-SI 188
Query: 230 LLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289
++ LY + + KF + + +N + I + VPT+ TR+
Sbjct: 189 IMRTLYNATSATVVDKFDENQLLEM------INSGK----INMVSLVPTLLTRI------ 232
Query: 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTE-FVMAIS-NP 347
A + LRL++ G +P P++++ + + G + + YGMTE F +++ N
Sbjct: 233 -------ADKLHSNNLRLILLGGEFIPQPLIKKCQEL-GLPIYKTYGMTESFSQSVTFNI 284
Query: 348 LRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTA 407
L K +VG PLPGV+++I + +D AGVGEI +KSP L K Y K TA
Sbjct: 285 LDFPDKTSSVGRPLPGVEIEIRQ----ADLAGVGEIWLKSPMLMKAYLG----QKPYGTA 336
Query: 408 DGFFKTGDTGKQDEDGYYIILGRK 431
F+TGD G D DG+ +L R+
Sbjct: 337 ---FETGDIGYLDTDGFLYLLNRR 357
>sp|B9J2F2|MENE_BACCQ 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1)
GN=menE PE=3 SV=1
Length = 481
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 177/425 (41%), Gaps = 56/425 (13%)
Query: 9 KKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG 68
++ + D AI +++ ++ QL + + C N ++ G
Sbjct: 10 QRAFLTPDRTAIEIEEEKVTFMQLHEKVVSV----CGNLTHVGVKR-------------G 52
Query: 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128
++ ++ K E + + + G +AV L ELL M D+++ +++ +D+
Sbjct: 53 QKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSREELLWQMDDAEVICLVTDQDFE-- 110
Query: 129 LQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGV 188
+K +S + E + ++ E + I+YTSGTTGKPKGV
Sbjct: 111 -----AKDIPVYSFAEVMNGPKEEAFIQEEFSLE--------EAMTIIYTSGTTGKPKGV 157
Query: 189 VHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV 248
+ T+ + A + D +L C+P+ HV GL + L+ + G + +PK+
Sbjct: 158 ILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGL-SLLMKNIMYGMRILLVPKYDA 216
Query: 249 RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308
I + + +T + V M T L++ + + + LR M
Sbjct: 217 DFIHKALQT----------RGVTIISVVSKMLTDLLE---------RLGAETYPSSLRCM 257
Query: 309 MCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQV 366
+ G P P+++ G + + YGMTE I K G+ G PL Q+
Sbjct: 258 LLGGGPAPKPLLETC-VEKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQL 316
Query: 367 KIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYI 426
+I +D A GEI VK P++ Y+ T+++ +G+ TGD G DE+G+
Sbjct: 317 RIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLY 375
Query: 427 ILGRK 431
+L R+
Sbjct: 376 VLDRR 380
>sp|B7HTW3|MENE_BACC7 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187)
GN=menE PE=3 SV=1
Length = 481
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 177/425 (41%), Gaps = 56/425 (13%)
Query: 9 KKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG 68
++ + D AI +++ ++ QL + + L +K G
Sbjct: 10 QRAFLTPDRTAIEIEEEKVTFMQLHEKVVSVCEHLTHVGVKR-----------------G 52
Query: 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128
++ ++ K E + + + G +AV L ELL M D+++ +++ +D+
Sbjct: 53 QKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSREELLWQMDDAEVICLVTDQDFD-- 110
Query: 129 LQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGV 188
+K +S + E ++ ++ E + I+YTSGTTGKPKGV
Sbjct: 111 -----AKDIPVYSFAEVMNGPKEEASIQEEFSLE--------EAMTIIYTSGTTGKPKGV 157
Query: 189 VHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV 248
+ T+ + A + D +L C+P+ HV GL + L+ + G + +PK+
Sbjct: 158 ILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGL-SLLMKNIMYGMRILLVPKYDA 216
Query: 249 RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308
I + + +T + V M T L++ + + + LR M
Sbjct: 217 DFIHKALQT----------RGVTIISVVSKMLTDLLE---------RLGAETYPSSLRCM 257
Query: 309 MCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQV 366
+ G P P+++ G + + YGMTE I K G+ G PL ++
Sbjct: 258 LLGGGPAPKPILETC-VEKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCRL 316
Query: 367 KIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYI 426
+I +D A GEI VK P++ Y+ T+++ +G+ TGD G DE+G+
Sbjct: 317 RIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLY 375
Query: 427 ILGRK 431
+L R+
Sbjct: 376 VLDRR 380
>sp|Q816I1|MENE_BACCR 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=menE PE=3 SV=1
Length = 482
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 159/366 (43%), Gaps = 39/366 (10%)
Query: 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127
G ++ ++ K E + + + G +AV L ELL M D+++ +++ +D+
Sbjct: 53 GQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSREELLWQMDDAEVVCLVTDQDFD- 111
Query: 128 VLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKG 187
+K +SL + E ++ ++ E + I+YTSGTTGKPKG
Sbjct: 112 ------AKDVPVYSLAEVMNGPKEEASIQEEFSLE--------EAMTIIYTSGTTGKPKG 157
Query: 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS 247
V+ T+ + A + D +L C+P+ HV GL + L+ + G + +PK+
Sbjct: 158 VILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGL-SLLMKNIMYGMRILLVPKYD 216
Query: 248 VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307
I + + +T + V M T L++ + + + LR
Sbjct: 217 ADFIHKALQT----------RGVTIISVVSKMLTDLLE---------RLGAETYPSSLRC 257
Query: 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQ 365
M+ G P P+++ G + + YGMTE I K G+ G PL Q
Sbjct: 258 MLLGGGPAPKPLLEAC-VEKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQ 316
Query: 366 VKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYY 425
++I +D GEI VK P++ Y+ T+++ +G+ TGD G DE+G+
Sbjct: 317 LRIEKDGVVVPPLVEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFL 375
Query: 426 IILGRK 431
+L R+
Sbjct: 376 YVLDRR 381
>sp|B7JDD6|MENE_BACC0 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820)
GN=menE PE=3 SV=1
Length = 482
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 177/426 (41%), Gaps = 58/426 (13%)
Query: 9 KKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG 68
++ + D AI +++ ++ QL + + L +K G
Sbjct: 11 QRAFLTPDRTAIEIEEEKVTFMQLHEKVVSVCEHLTHVGVKR-----------------G 53
Query: 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128
++ ++ K E + + ++G +AV L ELL M D+++ +++ +D+
Sbjct: 54 QKVAVLMKNGIEMITVIHALSYAGAVAVLLNTRLSREELLWQMDDAEVICLVTDQDFE-- 111
Query: 129 LQNVASKSGAKFSLIPPVPNVSSETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKG 187
+K +S + E ++ ++ S E M I+YTSGTTGKPKG
Sbjct: 112 -----AKDIPVYSFAEVMNGPKEEASIQEEFSLREAMT---------IIYTSGTTGKPKG 157
Query: 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS 247
V+ T+ + A + D +L C+P+ HV GL + L+ + G + +PK+
Sbjct: 158 VILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGL-SLLMKNIMYGMRILLVPKYD 216
Query: 248 VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307
I + + +T + V M T L++ + + LR
Sbjct: 217 ADFIHKALQT----------RGVTIISVVSKMLTDLLE---------RLGEGTYPSSLRC 257
Query: 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQ 365
M+ G P P+++ G + + YGMTE I K G+ G PL Q
Sbjct: 258 MLLGGGPAPKPLLETC-VDKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQ 316
Query: 366 VKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYY 425
++I +D GEI VK P++ Y+ T+++ +G+ TGD G DE+G+
Sbjct: 317 LRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFL 375
Query: 426 IILGRK 431
+L R+
Sbjct: 376 YVLDRR 381
>sp|Q6ETN3|4CL3_ORYSJ Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica
GN=4CL3 PE=2 SV=1
Length = 554
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 33/285 (11%)
Query: 161 AEKMDGQRGEDPALIV---YTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---YTSADQF 214
AE++D P +V Y+SGTTG PKGV+ TH+S+ V + Y S D
Sbjct: 168 AEELDADADVHPDDVVALPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFSKDDV 227
Query: 215 LHCL-PLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273
+ CL PL H++ L + LLA L AG+T+ M KF + + R+ IT
Sbjct: 228 ILCLLPLFHIYSLNSVLLAGLRAGSTIVIMRKFDLGALVDLVRK----------HNITIA 277
Query: 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQW-ETITGHRLL 332
VP + + + +L + +R++M G++ + + + I L
Sbjct: 278 PFVPPIVVEIAKSPRVTAEDLAS--------IRMVMSGAAPMGKDLQDAFMAKIPNAVLG 329
Query: 333 ERYGMTEFVMAISNPLRGAR-----KAGTVGNPLPGVQVKIAEDESGSDAA--GVGEICV 385
+ YGMTE ++ L A+ K+G+ G + ++KI + ++G+ GEIC+
Sbjct: 330 QGYGMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAELKIVDPDTGTSLGRNQSGEICI 389
Query: 386 KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGR 430
+ + K Y P+ TK++ DG+ TGD G D+D I+ R
Sbjct: 390 RGEQIMKGYLNDPEATKNTIDEDGWLHTGDIGFVDDDDEIFIVDR 434
>sp|Q6HC29|MENE_BACHK 2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=menE PE=3 SV=1
Length = 482
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 176/426 (41%), Gaps = 58/426 (13%)
Query: 9 KKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG 68
++ + D AI +++ ++ QL + + L +K G
Sbjct: 11 QRAFLTPDRTAIEIEEEKVTFMQLHEKVVSVCEHLTHVGVKR-----------------G 53
Query: 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128
++ ++ K E + + + G +AV L ELL M D+++ +++ +D+
Sbjct: 54 QKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSREELLWQMDDAEVICLVTDQDFE-- 111
Query: 129 LQNVASKSGAKFSLIPPVPNVSSETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKG 187
+K +S + E ++ ++ S E M I+YTSGTTGKPKG
Sbjct: 112 -----AKDIPVYSFAEVMNGPKEEASIQEEFSLREAMT---------IIYTSGTTGKPKG 157
Query: 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS 247
V+ T+ + A + D +L C+P+ HV GL + L+ + G + +PK+
Sbjct: 158 VILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGL-SLLMKNIMYGMRILLVPKYD 216
Query: 248 VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307
I + + +T + V M T L++ + + LR
Sbjct: 217 ADFIHKALQT----------RGVTIISVVSKMLTDLLE---------RLGEGTYPSSLRC 257
Query: 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQ 365
M+ G P P+++ G + + YGMTE I K G+ G PL Q
Sbjct: 258 MLLGGGPAPKPLLETC-VDKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQ 316
Query: 366 VKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYY 425
++I +D GEI VK P++ Y+ T+++ +G+ TGD G DE+G+
Sbjct: 317 LRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFL 375
Query: 426 IILGRK 431
+L R+
Sbjct: 376 YVLDRR 381
>sp|A8FGK6|MENE_BACP2 2-succinylbenzoate--CoA ligase OS=Bacillus pumilus (strain
SAFR-032) GN=menE PE=3 SV=1
Length = 486
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 120/266 (45%), Gaps = 36/266 (13%)
Query: 173 ALIVYTSGTTGKPKGVV-----HTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227
A I+YTSGTTG+PKGV H H ++ + + M D++L LPL H+ GL
Sbjct: 146 ATIMYTSGTTGRPKGVEQTFGNHFHSAVSSALNM-----GLREDDRWLIALPLFHISGL- 199
Query: 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287
+AL + G TV KF V V G+ +T + V TM +RL+
Sbjct: 200 SALFKSVIYGMTVVLHQKFDVD----------EVIGSIEQHRVTMISVVQTMLSRLLSRL 249
Query: 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISN- 346
E LR ++ G PL ++Q+ + G + + YGMTE I
Sbjct: 250 E-----------ECPSSLRCLLLGGGPAPLAMLQESKE-KGFPVFQSYGMTETCSQIVTL 297
Query: 347 -PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSF 405
P K G+ G PL G ++KI + GEI VK ++ K Y + T +F
Sbjct: 298 APEFSVEKLGSAGKPLFGCELKIQDGTRICRPFEHGEIMVKGANVMKGYLYREESTAAAF 357
Query: 406 TADGFFKTGDTGKQDEDGYYIILGRK 431
G+ KTGD G DE+G+ +L R+
Sbjct: 358 D-QGWLKTGDIGYVDEEGFLFVLDRR 382
>sp|P09095|TYCA_BREPA Tyrocidine synthase 1 OS=Brevibacillus parabrevis GN=tycA PE=1 SV=2
Length = 1088
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 173/434 (39%), Gaps = 77/434 (17%)
Query: 16 DSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75
D VAI + + SY +L A +++ L ++T S +G++
Sbjct: 42 DRVAIVFENRRLSYQELNRKANQLARALLEKGVQTDS-----------------IVGVMM 84
Query: 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135
+ S E V +L +G VP+ + YP + +++ DS +VL+ + +++ +V
Sbjct: 85 EKSIENVIAILAVLKAGGAYVPIDIEYPRDRIQYILQDSQTKIVLTQKSVSQLVHDVG-- 142
Query: 136 SGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDP------ALIVYTSGTTGKPKGVV 189
S E V D+ Q + + P A ++YTSGTTGKPKG +
Sbjct: 143 -------------YSGEVVVLDEEQLDARETANLHQPSKPTDLAYVIYTSGTTGKPKGTM 189
Query: 190 HTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVR 249
HK I ++ T D+ + ++ +A L +GA++ + K ++
Sbjct: 190 LEHKGIANLQSFFQNSFGVTEQDRIGLFASMSFDASVWEMFMA-LLSGASLYILSKQTIH 248
Query: 250 GIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309
E Y + +T T PT T L + LR+M+
Sbjct: 249 DFAA--FEHY-----LSENELTIITLPPTYLTHL--------------TPERITSLRIMI 287
Query: 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVM------AISNPLRGARKAGTVGNPLPG 363
SA P++ +W+ R + YG TE + A SN L + ++ +G P+
Sbjct: 288 TAGSASSAPLVNKWKDKL--RYINAYGPTETSICATIWEAPSNQL--SVQSVPIGKPIQN 343
Query: 364 VQVKIA-EDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDT 416
+ I ED GE+C+ L + YW P +T + F + F ++TGD
Sbjct: 344 THIYIVNEDLQLLPTGSEGELCIGGVGLARGYWNRPDLTAEKFVDNPFVPGEKMYRTGDL 403
Query: 417 GKQDEDGYYIILGR 430
K DG LGR
Sbjct: 404 AKWLTDGTIEFLGR 417
>sp|A0RK73|MENE_BACAH 2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis (strain Al
Hakam) GN=menE PE=3 SV=1
Length = 482
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 176/426 (41%), Gaps = 58/426 (13%)
Query: 9 KKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG 68
++ + D AI +++ ++ QL + + L +K G
Sbjct: 11 QRAFLTPDRTAIEIEEEKVTFVQLHEKVVSVCEHLTHVGVKR-----------------G 53
Query: 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128
++ ++ K E + + + G +AV L ELL M D+++ +++ +D+
Sbjct: 54 QKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSREELLWQMDDAEVICLVTDQDFE-- 111
Query: 129 LQNVASKSGAKFSLIPPVPNVSSETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKG 187
+K +S + E ++ ++ S E M I+YTSGTTGKPKG
Sbjct: 112 -----AKDIPVYSFAEVMNGPKEEASIQEEFSLREAMT---------IIYTSGTTGKPKG 157
Query: 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS 247
V+ T+ + A + D +L C+P+ HV GL + L+ + G + +PK+
Sbjct: 158 VILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGL-SLLMKNIMYGMRILLVPKYD 216
Query: 248 VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307
I + + +T + V M T L++ + + LR
Sbjct: 217 ADFIHKALQT----------RGVTIISVVSKMLTDLLE---------RLGEGTYPSSLRC 257
Query: 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQ 365
M+ G P P+++ G + + YGMTE I K G+ G PL Q
Sbjct: 258 MLLGGGPAPKPLLETC-VDKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQ 316
Query: 366 VKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYY 425
++I +D GEI VK P++ Y+ T+++ +G+ TGD G DE+G+
Sbjct: 317 LRIEKDGVVVPPFVEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFL 375
Query: 426 IILGRK 431
+L R+
Sbjct: 376 YVLDRR 381
>sp|Q632I5|MENE_BACCZ 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK /
E33L) GN=menE PE=3 SV=1
Length = 482
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 176/428 (41%), Gaps = 62/428 (14%)
Query: 9 KKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG 68
++ + D AI +++ ++ QL + + L +K G
Sbjct: 11 QRAFLTPDRTAIEMEEEKVTFMQLHEKVVSVCEHLTHVGVKR-----------------G 53
Query: 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128
++ ++ K E + + + G +AV L ELL M D+++ +++ +D+
Sbjct: 54 QKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSREELLWQMDDAEVICLVTDQDFE-- 111
Query: 129 LQNVASKSGAKFSLIPPVPNVSSETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKG 187
+K +S + E ++ ++ S E M I+YTSGTTGKPKG
Sbjct: 112 -----AKDIPVYSFAEVMNGPKEEASIQEEFSLKEAMT---------IIYTSGTTGKPKG 157
Query: 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS 247
V+ T+ + A + D +L C+P+ HV GL + L+ + G + +PK+
Sbjct: 158 VILTYGNHWASAVGSSFNLGLRDDDCWLACMPMFHVGGL-SLLMKNIMYGMRILLVPKYD 216
Query: 248 VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307
I + + +T + V M T L++ + + LR
Sbjct: 217 ADFIHKALQT----------RGVTIISVVSKMLTDLLE---------RLGEETYPPSLRC 257
Query: 308 MMCGSSALPLPVMQQWETITGHRL--LERYGMTEFVMAISNPLRG--ARKAGTVGNPLPG 363
M+ G P P++ E R+ + YGMTE I K G+ G PL
Sbjct: 258 MLLGGGPAPKPLL---EACVEKRIPVYQTYGMTETSSQICTLSADYMLMKVGSAGKPLFQ 314
Query: 364 VQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDG 423
Q++I +D GEI VK P++ Y+ T+++ +G+ TGD G DE+G
Sbjct: 315 CQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEG 373
Query: 424 YYIILGRK 431
+ +L R+
Sbjct: 374 FLYVLDRR 381
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,368,695
Number of Sequences: 539616
Number of extensions: 6560484
Number of successful extensions: 18131
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 15938
Number of HSP's gapped (non-prelim): 1247
length of query: 435
length of database: 191,569,459
effective HSP length: 120
effective length of query: 315
effective length of database: 126,815,539
effective search space: 39946894785
effective search space used: 39946894785
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)